##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM91449272v1 #!genome-build-accession NCBI_Assembly:GCF_914492725.1 #!annotation-date 09/12/2024 05:34:36 #!annotation-source NCBI RefSeq GCF_914492725.1-RS_2024_09_12 ##sequence-region NZ_CAJZAS010000001.1 1 242724 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000001.1 RefSeq region 1 242724 . + . ID=NZ_CAJZAS010000001.1:1..242724;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_1 NZ_CAJZAS010000001.1 RefSeq gene 1 832 . + . ID=gene-LDO45_RS00005;Name=LDO45_RS00005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00005;old_locus_tag=BDI4_10001;partial=true;start_range=.,1 NZ_CAJZAS010000001.1 Protein Homology CDS 1 832 . + 1 ID=cds-WP_223958448.1;Parent=gene-LDO45_RS00005;Dbxref=GenBank:WP_223958448.1;Name=WP_223958448.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403658.1;locus_tag=LDO45_RS00005;partial=true;product=ABC transporter permease;protein_id=WP_223958448.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 826 1650 . + . ID=gene-LDO45_RS00010;Name=LDO45_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00010;old_locus_tag=BDI4_10002 NZ_CAJZAS010000001.1 Protein Homology CDS 826 1650 . + 0 ID=cds-WP_223958451.1;Parent=gene-LDO45_RS00010;Dbxref=GenBank:WP_223958451.1;Name=WP_223958451.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488658.1;locus_tag=LDO45_RS00010;product=ABC transporter ATP-binding protein;protein_id=WP_223958451.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 1701 2882 . + . ID=gene-LDO45_RS00015;Name=LDO45_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00015;old_locus_tag=BDI4_10003 NZ_CAJZAS010000001.1 Protein Homology CDS 1701 2882 . + 0 ID=cds-WP_223958458.1;Parent=gene-LDO45_RS00015;Dbxref=GenBank:WP_223958458.1;Name=WP_223958458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338270.1;locus_tag=LDO45_RS00015;product=cytochrome c;protein_id=WP_223958458.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 2921 3880 . + . ID=gene-LDO45_RS00020;Name=LDO45_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00020;old_locus_tag=BDI4_10004 NZ_CAJZAS010000001.1 Protein Homology CDS 2921 3880 . + 0 ID=cds-WP_059525225.1;Parent=gene-LDO45_RS00020;Dbxref=GenBank:WP_059525225.1;Name=WP_059525225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217070.1;locus_tag=LDO45_RS00020;product=ABC transporter substrate-binding protein;protein_id=WP_059525225.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 3980 4846 . + . ID=gene-LDO45_RS00025;Name=LDO45_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00025;old_locus_tag=BDI4_10005 NZ_CAJZAS010000001.1 Protein Homology CDS 3980 4846 . + 0 ID=cds-WP_223958460.1;Parent=gene-LDO45_RS00025;Dbxref=GenBank:WP_223958460.1;Name=WP_223958460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338272.1;locus_tag=LDO45_RS00025;product=MOSC domain-containing protein;protein_id=WP_223958460.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 4929 6326 . - . ID=gene-LDO45_RS00030;Name=LDO45_RS00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00030;old_locus_tag=BDI4_10006 NZ_CAJZAS010000001.1 Protein Homology CDS 4929 6326 . - 0 ID=cds-WP_223958997.1;Parent=gene-LDO45_RS00030;Dbxref=GenBank:WP_223958997.1;Name=WP_223958997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899529.1;locus_tag=LDO45_RS00030;product=sensor histidine kinase;protein_id=WP_223958997.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 6454 7128 . - . ID=gene-LDO45_RS00035;Name=LDO45_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00035;old_locus_tag=BDI4_10007 NZ_CAJZAS010000001.1 Protein Homology CDS 6454 7128 . - 0 ID=cds-WP_059450182.1;Parent=gene-LDO45_RS00035;Dbxref=GenBank:WP_059450182.1;Name=WP_059450182.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479157.1;locus_tag=LDO45_RS00035;product=response regulator;protein_id=WP_059450182.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 7254 8354 . + . ID=gene-LDO45_RS00040;Name=LDO45_RS00040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00040;old_locus_tag=BDI4_10008 NZ_CAJZAS010000001.1 Protein Homology CDS 7254 8354 . + 0 ID=cds-WP_059689973.1;Parent=gene-LDO45_RS00040;Dbxref=GenBank:WP_059689973.1;Name=WP_059689973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758975.1;locus_tag=LDO45_RS00040;product=ABC transporter substrate-binding protein;protein_id=WP_059689973.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 8469 10241 . + . ID=gene-LDO45_RS00045;Name=LDO45_RS00045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00045;old_locus_tag=BDI4_10009 NZ_CAJZAS010000001.1 Protein Homology CDS 8469 10241 . + 0 ID=cds-WP_059525219.1;Parent=gene-LDO45_RS00045;Dbxref=GenBank:WP_059525219.1;Name=WP_059525219.1;Ontology_term=GO:0006826,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899532.1;locus_tag=LDO45_RS00045;product=iron ABC transporter permease;protein_id=WP_059525219.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 10234 11301 . + . ID=gene-LDO45_RS00050;Name=LDO45_RS00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00050;old_locus_tag=BDI4_10010 NZ_CAJZAS010000001.1 Protein Homology CDS 10234 11301 . + 0 ID=cds-WP_223958462.1;Parent=gene-LDO45_RS00050;Dbxref=GenBank:WP_223958462.1;Name=WP_223958462.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724979.1;locus_tag=LDO45_RS00050;product=ABC transporter ATP-binding protein;protein_id=WP_223958462.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 11440 12513 . + . ID=gene-LDO45_RS00055;Name=LDO45_RS00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00055;old_locus_tag=BDI4_10011 NZ_CAJZAS010000001.1 Protein Homology CDS 11440 12513 . + 0 ID=cds-WP_059818986.1;Parent=gene-LDO45_RS00055;Dbxref=GenBank:WP_059818986.1;Name=WP_059818986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403670.1;locus_tag=LDO45_RS00055;product=porin;protein_id=WP_059818986.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 12644 13606 . - . ID=gene-LDO45_RS00060;Name=LDO45_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00060;old_locus_tag=BDI4_10012 NZ_CAJZAS010000001.1 Protein Homology CDS 12644 13606 . - 0 ID=cds-WP_223958464.1;Parent=gene-LDO45_RS00060;Dbxref=GenBank:WP_223958464.1;Name=WP_223958464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338281.1;locus_tag=LDO45_RS00060;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_223958464.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 13603 13890 . - . ID=gene-LDO45_RS00065;Name=LDO45_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00065;old_locus_tag=BDI4_10013 NZ_CAJZAS010000001.1 Protein Homology CDS 13603 13890 . - 0 ID=cds-WP_059525211.1;Parent=gene-LDO45_RS00065;Dbxref=GenBank:WP_059525211.1;Name=WP_059525211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490702.1;locus_tag=LDO45_RS00065;product=hypothetical protein;protein_id=WP_059525211.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 13986 14777 . + . ID=gene-LDO45_RS00070;Name=LDO45_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00070;old_locus_tag=BDI4_10014 NZ_CAJZAS010000001.1 Protein Homology CDS 13986 14777 . + 0 ID=cds-WP_223958465.1;Parent=gene-LDO45_RS00070;Dbxref=GenBank:WP_223958465.1;Name=WP_223958465.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547836.1;locus_tag=LDO45_RS00070;product=helix-turn-helix domain-containing protein;protein_id=WP_223958465.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 14861 15664 . - . ID=gene-LDO45_RS00075;Name=hpaI;gbkey=Gene;gene=hpaI;gene_biotype=protein_coding;locus_tag=LDO45_RS00075;old_locus_tag=BDI4_10015 NZ_CAJZAS010000001.1 Protein Homology CDS 14861 15664 . - 0 ID=cds-WP_223958467.1;Parent=gene-LDO45_RS00075;Dbxref=GenBank:WP_223958467.1;Name=WP_223958467.1;Ontology_term=GO:0010124,GO:0018802;gbkey=CDS;gene=hpaI;go_function=2%2C4-dihydroxyhept-2-ene-1%2C7-dioate aldolase activity|0018802||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494968.1;locus_tag=LDO45_RS00075;product=4-hydroxy-2-oxoheptanedioate aldolase;protein_id=WP_223958467.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 15677 16480 . - . ID=gene-LDO45_RS00080;Name=hpaH;gbkey=Gene;gene=hpaH;gene_biotype=protein_coding;locus_tag=LDO45_RS00080;old_locus_tag=BDI4_10016 NZ_CAJZAS010000001.1 Protein Homology CDS 15677 16480 . - 0 ID=cds-WP_223958469.1;Parent=gene-LDO45_RS00080;Dbxref=GenBank:WP_223958469.1;Name=WP_223958469.1;Ontology_term=GO:0009056,GO:0018817;gbkey=CDS;gene=hpaH;go_function=2-oxo-hept-3-ene-1%2C7-dioate hydratase activity|0018817||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532788.1;locus_tag=LDO45_RS00080;product=2-oxo-hept-4-ene-1%2C7-dioate hydratase;protein_id=WP_223958469.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 16501 16893 . - . ID=gene-LDO45_RS00085;Name=LDO45_RS00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00085;old_locus_tag=BDI4_10017 NZ_CAJZAS010000001.1 Protein Homology CDS 16501 16893 . - 0 ID=cds-WP_059689967.1;Parent=gene-LDO45_RS00085;Dbxref=GenBank:WP_059689967.1;Name=WP_059689967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479169.1;locus_tag=LDO45_RS00085;product=5-carboxymethyl-2-hydroxymuconate Delta-isomerase;protein_id=WP_059689967.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 16923 17771 . - . ID=gene-LDO45_RS00090;Name=hpaD;gbkey=Gene;gene=hpaD;gene_biotype=protein_coding;locus_tag=LDO45_RS00090;old_locus_tag=BDI4_10018 NZ_CAJZAS010000001.1 Protein Homology CDS 16923 17771 . - 0 ID=cds-WP_223958477.1;Parent=gene-LDO45_RS00090;Dbxref=GenBank:WP_223958477.1;Name=WP_223958477.1;Ontology_term=GO:0008152,GO:0008198,GO:0008687;gbkey=CDS;gene=hpaD;go_function=ferrous iron binding|0008198||IEA,3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase activity|0008687||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329640.1;locus_tag=LDO45_RS00090;product=3%2C4-dihydroxyphenylacetate 2%2C3-dioxygenase;protein_id=WP_223958477.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 17836 19299 . - . ID=gene-LDO45_RS00095;Name=hpaE;gbkey=Gene;gene=hpaE;gene_biotype=protein_coding;locus_tag=LDO45_RS00095;old_locus_tag=BDI4_10019 NZ_CAJZAS010000001.1 Protein Homology CDS 17836 19299 . - 0 ID=cds-WP_059818981.1;Parent=gene-LDO45_RS00095;Dbxref=GenBank:WP_059818981.1;Name=WP_059818981.1;Ontology_term=GO:1901023,GO:0018480;gbkey=CDS;gene=hpaE;go_function=5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase activity|0018480||IEA;go_process=4-hydroxyphenylacetate catabolic process|1901023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009900809.1;locus_tag=LDO45_RS00095;product=5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase;protein_id=WP_059818981.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 19322 20086 . - . ID=gene-LDO45_RS00100;Name=LDO45_RS00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00100;old_locus_tag=BDI4_10020 NZ_CAJZAS010000001.1 Protein Homology CDS 19322 20086 . - 0 ID=cds-WP_223958493.1;Parent=gene-LDO45_RS00100;Dbxref=GenBank:WP_223958493.1;Name=WP_223958493.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765813.1;locus_tag=LDO45_RS00100;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_223958493.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 20083 20772 . - . ID=gene-LDO45_RS00105;Name=LDO45_RS00105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00105;old_locus_tag=BDI4_10021 NZ_CAJZAS010000001.1 Protein Homology CDS 20083 20772 . - 0 ID=cds-WP_059689963.1;Parent=gene-LDO45_RS00105;Dbxref=GenBank:WP_059689963.1;Name=WP_059689963.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415060.1;locus_tag=LDO45_RS00105;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_059689963.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 20933 21373 . + . ID=gene-LDO45_RS00110;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=protein_coding;locus_tag=LDO45_RS00110;old_locus_tag=BDI4_10022 NZ_CAJZAS010000001.1 Protein Homology CDS 20933 21373 . + 0 ID=cds-WP_059525192.1;Parent=gene-LDO45_RS00110;Dbxref=GenBank:WP_059525192.1;Name=WP_059525192.1;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754041.1;locus_tag=LDO45_RS00110;product=homoprotocatechuate degradation operon regulator HpaR;protein_id=WP_059525192.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 21452 22663 . - . ID=gene-LDO45_RS00115;Name=LDO45_RS00115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00115;old_locus_tag=BDI4_10023 NZ_CAJZAS010000001.1 Protein Homology CDS 21452 22663 . - 0 ID=cds-WP_223958502.1;Parent=gene-LDO45_RS00115;Dbxref=GenBank:WP_223958502.1;Name=WP_223958502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658669.1;locus_tag=LDO45_RS00115;product=SDR family oxidoreductase;protein_id=WP_223958502.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 23314 23661 . + . ID=gene-LDO45_RS00120;Name=LDO45_RS00120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00120;old_locus_tag=BDI4_10024 NZ_CAJZAS010000001.1 Protein Homology CDS 23314 23661 . + 0 ID=cds-WP_059525188.1;Parent=gene-LDO45_RS00120;Dbxref=GenBank:WP_059525188.1;Name=WP_059525188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882083.1;locus_tag=LDO45_RS00120;product=DUF3564 family protein;protein_id=WP_059525188.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 24037 25929 . + . ID=gene-LDO45_RS00125;Name=LDO45_RS00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00125;old_locus_tag=BDI4_10025 NZ_CAJZAS010000001.1 Protein Homology CDS 24037 25929 . + 0 ID=cds-WP_223958516.1;Parent=gene-LDO45_RS00125;Dbxref=GenBank:WP_223958516.1;Name=WP_223958516.1;Ontology_term=GO:0008658;gbkey=CDS;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415051.1;locus_tag=LDO45_RS00125;product=penicillin-binding protein 2;protein_id=WP_223958516.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 26060 27781 . - . ID=gene-LDO45_RS00130;Name=LDO45_RS00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00130;old_locus_tag=BDI4_10026 NZ_CAJZAS010000001.1 Protein Homology CDS 26060 27781 . - 0 ID=cds-WP_223958532.1;Parent=gene-LDO45_RS00130;Dbxref=GenBank:WP_223958532.1;Name=WP_223958532.1;Ontology_term=GO:0006812,GO:0055085,GO:1902600,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089790.1;locus_tag=LDO45_RS00130;product=cation:proton antiporter;protein_id=WP_223958532.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 27966 29360 . - . ID=gene-LDO45_RS00135;Name=LDO45_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00135;old_locus_tag=BDI4_10027 NZ_CAJZAS010000001.1 Protein Homology CDS 27966 29360 . - 0 ID=cds-WP_223958534.1;Parent=gene-LDO45_RS00135;Dbxref=GenBank:WP_223958534.1;Name=WP_223958534.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547847.1;locus_tag=LDO45_RS00135;product=cytochrome c;protein_id=WP_223958534.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 29357 31135 . - . ID=gene-LDO45_RS00140;Name=LDO45_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00140;old_locus_tag=BDI4_10028 NZ_CAJZAS010000001.1 Protein Homology CDS 29357 31135 . - 0 ID=cds-WP_059525180.1;Parent=gene-LDO45_RS00140;Dbxref=GenBank:WP_059525180.1;Name=WP_059525180.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759726.1;locus_tag=LDO45_RS00140;product=GMC family oxidoreductase;protein_id=WP_059525180.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 31135 31872 . - . ID=gene-LDO45_RS00145;Name=LDO45_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00145;old_locus_tag=BDI4_10029 NZ_CAJZAS010000001.1 Protein Homology CDS 31135 31872 . - 0 ID=cds-WP_223958542.1;Parent=gene-LDO45_RS00145;Dbxref=GenBank:WP_223958542.1;Name=WP_223958542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415138.1;locus_tag=LDO45_RS00145;product=gluconate 2-dehydrogenase subunit 3 family protein;protein_id=WP_223958542.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 32033 32239 . + . ID=gene-LDO45_RS00150;Name=LDO45_RS00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00150;old_locus_tag=BDI4_10030 NZ_CAJZAS010000001.1 GeneMarkS-2+ CDS 32033 32239 . + 0 ID=cds-WP_223958544.1;Parent=gene-LDO45_RS00150;Dbxref=GenBank:WP_223958544.1;Name=WP_223958544.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS00150;product=hypothetical protein;protein_id=WP_223958544.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 32484 32900 . - . ID=gene-LDO45_RS00155;Name=LDO45_RS00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00155;old_locus_tag=BDI4_10032 NZ_CAJZAS010000001.1 Protein Homology CDS 32484 32900 . - 0 ID=cds-WP_223958546.1;Parent=gene-LDO45_RS00155;Dbxref=GenBank:WP_223958546.1;Name=WP_223958546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547851.1;locus_tag=LDO45_RS00155;product=DUF3995 domain-containing protein;protein_id=WP_223958546.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 33255 34370 . + . ID=gene-LDO45_RS00160;Name=ald;gbkey=Gene;gene=ald;gene_biotype=protein_coding;locus_tag=LDO45_RS00160;old_locus_tag=BDI4_10031 NZ_CAJZAS010000001.1 Protein Homology CDS 33255 34370 . + 0 ID=cds-WP_059525694.1;Parent=gene-LDO45_RS00160;Dbxref=GenBank:WP_059525694.1;Name=WP_059525694.1;Ontology_term=GO:0042853,GO:0000286;gbkey=CDS;gene=ald;go_function=alanine dehydrogenase activity|0000286||IEA;go_process=L-alanine catabolic process|0042853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365921.1;locus_tag=LDO45_RS00160;product=alanine dehydrogenase;protein_id=WP_059525694.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 34386 36152 . - . ID=gene-LDO45_RS00165;Name=polX;gbkey=Gene;gene=polX;gene_biotype=protein_coding;locus_tag=LDO45_RS00165;old_locus_tag=BDI4_10033 NZ_CAJZAS010000001.1 Protein Homology CDS 34386 36152 . - 0 ID=cds-WP_223958570.1;Parent=gene-LDO45_RS00165;Dbxref=GenBank:WP_223958570.1;Name=WP_223958570.1;Ontology_term=GO:0006281,GO:0003677,GO:0003887;gbkey=CDS;gene=polX;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753535.1;locus_tag=LDO45_RS00165;product=DNA polymerase/3'-5' exonuclease PolX;protein_id=WP_223958570.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 36322 36714 . - . ID=gene-LDO45_RS34350;Name=LDO45_RS34350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34350;old_locus_tag=BDI4_10034 NZ_CAJZAS010000001.1 Protein Homology CDS 36322 36714 . - 0 ID=cds-WP_059525174.1;Parent=gene-LDO45_RS34350;Dbxref=GenBank:WP_059525174.1;Name=WP_059525174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759722.1;locus_tag=LDO45_RS34350;product=TraR/DksA C4-type zinc finger protein;protein_id=WP_059525174.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 37058 37231 . + . ID=gene-LDO45_RS00175;Name=LDO45_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00175 NZ_CAJZAS010000001.1 Protein Homology CDS 37058 37231 . + 0 ID=cds-WP_175907158.1;Parent=gene-LDO45_RS00175;Dbxref=GenBank:WP_175907158.1;Name=WP_175907158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724999.1;locus_tag=LDO45_RS00175;product=hypothetical protein;protein_id=WP_175907158.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 37314 38705 . - . ID=gene-LDO45_RS00180;Name=LDO45_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00180;old_locus_tag=BDI4_10035 NZ_CAJZAS010000001.1 Protein Homology CDS 37314 38705 . - 0 ID=cds-WP_223958574.1;Parent=gene-LDO45_RS00180;Dbxref=GenBank:WP_223958574.1;Name=WP_223958574.1;Ontology_term=GO:0016780;gbkey=CDS;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753532.1;locus_tag=LDO45_RS00180;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_223958574.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 38738 39520 . - . ID=gene-LDO45_RS00185;Name=LDO45_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00185;old_locus_tag=BDI4_10036 NZ_CAJZAS010000001.1 Protein Homology CDS 38738 39520 . - 0 ID=cds-WP_059525170.1;Parent=gene-LDO45_RS00185;Dbxref=GenBank:WP_059525170.1;Name=WP_059525170.1;Ontology_term=GO:0006355,GO:0003700,GO:0030552;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,cAMP binding|0030552||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882072.1;locus_tag=LDO45_RS00185;product=Crp/Fnr family transcriptional regulator;protein_id=WP_059525170.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 40438 41220 . + . ID=gene-LDO45_RS00190;Name=LDO45_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00190;old_locus_tag=BDI4_10039 NZ_CAJZAS010000001.1 Protein Homology CDS 40438 41220 . + 0 ID=cds-WP_223958584.1;Parent=gene-LDO45_RS00190;Dbxref=GenBank:WP_223958584.1;Name=WP_223958584.1;Ontology_term=GO:0006355,GO:0003700,GO:0030552;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,cAMP binding|0030552||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899562.1;locus_tag=LDO45_RS00190;product=Crp/Fnr family transcriptional regulator;protein_id=WP_223958584.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 41389 41640 . + . ID=gene-LDO45_RS00195;Name=LDO45_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00195;old_locus_tag=BDI4_10041 NZ_CAJZAS010000001.1 Protein Homology CDS 41389 41640 . + 0 ID=cds-WP_047903457.1;Parent=gene-LDO45_RS00195;Dbxref=GenBank:WP_047903457.1;Name=WP_047903457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522820.1;locus_tag=LDO45_RS00195;product=acyl carrier protein;protein_id=WP_047903457.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 41637 42833 . + . ID=gene-LDO45_RS00200;Name=LDO45_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00200;old_locus_tag=BDI4_10042 NZ_CAJZAS010000001.1 Protein Homology CDS 41637 42833 . + 0 ID=cds-WP_223958586.1;Parent=gene-LDO45_RS00200;Dbxref=GenBank:WP_223958586.1;Name=WP_223958586.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490448.1;locus_tag=LDO45_RS00200;product=acyl-CoA dehydrogenase family protein;protein_id=WP_223958586.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 42830 43801 . + . ID=gene-LDO45_RS00205;Name=LDO45_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00205;old_locus_tag=BDI4_10043 NZ_CAJZAS010000001.1 Protein Homology CDS 42830 43801 . + 0 ID=cds-WP_223958588.1;Parent=gene-LDO45_RS00205;Dbxref=GenBank:WP_223958588.1;Name=WP_223958588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547858.1;locus_tag=LDO45_RS00205;product=amino acid--[acyl-carrier-protein] ligase;protein_id=WP_223958588.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 43798 44853 . + . ID=gene-LDO45_RS00210;Name=LDO45_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00210;old_locus_tag=BDI4_10044 NZ_CAJZAS010000001.1 Protein Homology CDS 43798 44853 . + 0 ID=cds-WP_059700207.1;Parent=gene-LDO45_RS00210;Dbxref=GenBank:WP_059700207.1;Name=WP_059700207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365914.1;locus_tag=LDO45_RS00210;product=DUF1839 family protein;protein_id=WP_059700207.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 44850 47324 . + . ID=gene-LDO45_RS00215;Name=LDO45_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00215;old_locus_tag=BDI4_10045 NZ_CAJZAS010000001.1 Protein Homology CDS 44850 47324 . + 0 ID=cds-WP_223958597.1;Parent=gene-LDO45_RS00215;Dbxref=GenBank:WP_223958597.1;Name=WP_223958597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403707.1;locus_tag=LDO45_RS00215;product=glycoside hydrolase family 2 protein;protein_id=WP_223958597.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 47370 48761 . - . ID=gene-LDO45_RS00220;Name=LDO45_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00220;old_locus_tag=BDI4_10046 NZ_CAJZAS010000001.1 Protein Homology CDS 47370 48761 . - 0 ID=cds-WP_059525160.1;Parent=gene-LDO45_RS00220;Dbxref=GenBank:WP_059525160.1;Name=WP_059525160.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217119.1;locus_tag=LDO45_RS00220;product=sigma-54 dependent transcriptional regulator;protein_id=WP_059525160.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 50062 50646 . + . ID=gene-LDO45_RS00225;Name=LDO45_RS00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00225;old_locus_tag=BDI4_10048 NZ_CAJZAS010000001.1 Protein Homology CDS 50062 50646 . + 0 ID=cds-WP_223958999.1;Parent=gene-LDO45_RS00225;Dbxref=GenBank:WP_223958999.1;Name=WP_223958999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658650.1;locus_tag=LDO45_RS00225;product=drug:proton antiporter;protein_id=WP_223958999.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 50643 52217 . + . ID=gene-LDO45_RS00230;Name=LDO45_RS00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00230;old_locus_tag=BDI4_10049 NZ_CAJZAS010000001.1 Protein Homology CDS 50643 52217 . + 0 ID=cds-WP_223958600.1;Parent=gene-LDO45_RS00230;Dbxref=GenBank:WP_223958600.1;Name=WP_223958600.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217122.1;locus_tag=LDO45_RS00230;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_223958600.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 52332 53621 . - . ID=gene-LDO45_RS00235;Name=LDO45_RS00235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00235;old_locus_tag=BDI4_10050 NZ_CAJZAS010000001.1 Protein Homology CDS 52332 53621 . - 0 ID=cds-WP_223958602.1;Parent=gene-LDO45_RS00235;Dbxref=GenBank:WP_223958602.1;Name=WP_223958602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365910.1;locus_tag=LDO45_RS00235;product=nitrous oxide reductase family maturation protein NosD;protein_id=WP_223958602.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 54037 55086 . + . ID=gene-LDO45_RS00240;Name=LDO45_RS00240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00240;old_locus_tag=BDI4_10051 NZ_CAJZAS010000001.1 Protein Homology CDS 54037 55086 . + 0 ID=cds-WP_223958604.1;Parent=gene-LDO45_RS00240;Dbxref=GenBank:WP_223958604.1;Name=WP_223958604.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760495.1;locus_tag=LDO45_RS00240;product=glycosyltransferase family 2 protein;protein_id=WP_223958604.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 55543 56691 . + . ID=gene-LDO45_RS00245;Name=LDO45_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00245;old_locus_tag=BDI4_10053 NZ_CAJZAS010000001.1 Protein Homology CDS 55543 56691 . + 0 ID=cds-WP_223958619.1;Parent=gene-LDO45_RS00245;Dbxref=GenBank:WP_223958619.1;Name=WP_223958619.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410326.1;locus_tag=LDO45_RS00245;product=glycosyltransferase;protein_id=WP_223958619.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 56719 57798 . + . ID=gene-LDO45_RS00250;Name=LDO45_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00250;old_locus_tag=BDI4_10054 NZ_CAJZAS010000001.1 Protein Homology CDS 56719 57798 . + 0 ID=cds-WP_223958626.1;Parent=gene-LDO45_RS00250;Dbxref=GenBank:WP_223958626.1;Name=WP_223958626.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490756.1;locus_tag=LDO45_RS00250;product=glycosyltransferase family 1 protein;protein_id=WP_223958626.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 57939 59108 . - . ID=gene-LDO45_RS00255;Name=LDO45_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00255;old_locus_tag=BDI4_10055 NZ_CAJZAS010000001.1 Protein Homology CDS 57939 59108 . - 0 ID=cds-WP_223958628.1;Parent=gene-LDO45_RS00255;Dbxref=GenBank:WP_223958628.1;Name=WP_223958628.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658644.1;locus_tag=LDO45_RS00255;product=acyltransferase;protein_id=WP_223958628.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 59196 60599 . - . ID=gene-LDO45_RS00260;Name=LDO45_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00260;old_locus_tag=BDI4_10056 NZ_CAJZAS010000001.1 Protein Homology CDS 59196 60599 . - 0 ID=cds-WP_223958630.1;Parent=gene-LDO45_RS00260;Dbxref=GenBank:WP_223958630.1;Name=WP_223958630.1;Ontology_term=GO:0000271,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753877.1;locus_tag=LDO45_RS00260;product=oligosaccharide repeat unit polymerase;protein_id=WP_223958630.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 60596 62869 . - . ID=gene-LDO45_RS00265;Name=LDO45_RS00265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00265;old_locus_tag=BDI4_10057 NZ_CAJZAS010000001.1 Protein Homology CDS 60596 62869 . - 0 ID=cds-WP_223958645.1;Parent=gene-LDO45_RS00265;Dbxref=GenBank:WP_223958645.1;Name=WP_223958645.1;Ontology_term=GO:0045226;gbkey=CDS;go_process=extracellular polysaccharide biosynthetic process|0045226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658642.1;locus_tag=LDO45_RS00265;product=polysaccharide biosynthesis tyrosine autokinase;protein_id=WP_223958645.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 62928 64154 . - . ID=gene-LDO45_RS00270;Name=LDO45_RS00270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00270;old_locus_tag=BDI4_10059 NZ_CAJZAS010000001.1 Protein Homology CDS 62928 64154 . - 0 ID=cds-WP_223958659.1;Parent=gene-LDO45_RS00270;Dbxref=GenBank:WP_223958659.1;Name=WP_223958659.1;Ontology_term=GO:0015774,GO:0015159,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=polysaccharide transmembrane transporter activity|0015159||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762375.1;locus_tag=LDO45_RS00270;product=polysaccharide biosynthesis/export family protein;protein_id=WP_223958659.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 64282 64701 . + . ID=gene-LDO45_RS00275;Name=LDO45_RS00275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00275 NZ_CAJZAS010000001.1 Protein Homology CDS 64282 64701 . + 0 ID=cds-WP_223958661.1;Parent=gene-LDO45_RS00275;Dbxref=GenBank:WP_223958661.1;Name=WP_223958661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899579.1;locus_tag=LDO45_RS00275;product=hypothetical protein;protein_id=WP_223958661.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 64864 66720 . - . ID=gene-LDO45_RS00280;Name=LDO45_RS00280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00280;old_locus_tag=BDI4_10061 NZ_CAJZAS010000001.1 Protein Homology CDS 64864 66720 . - 0 ID=cds-WP_308051000.1;Parent=gene-LDO45_RS00280;Dbxref=GenBank:WP_308051000.1;Name=WP_308051000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365901.1;locus_tag=LDO45_RS00280;product=serine aminopeptidase domain-containing protein;protein_id=WP_308051000.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 67293 68552 . + . ID=gene-LDO45_RS00285;Name=LDO45_RS00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00285;old_locus_tag=BDI4_10062 NZ_CAJZAS010000001.1 Protein Homology CDS 67293 68552 . + 0 ID=cds-WP_059700184.1;Parent=gene-LDO45_RS00285;Dbxref=GenBank:WP_059700184.1;Name=WP_059700184.1;Ontology_term=GO:0140327;gbkey=CDS;go_function=flippase activity|0140327||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899582.1;locus_tag=LDO45_RS00285;product=flippase;protein_id=WP_059700184.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 69051 71252 . + . ID=gene-LDO45_RS00290;Name=LDO45_RS00290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00290;old_locus_tag=BDI4_10063 NZ_CAJZAS010000001.1 Protein Homology CDS 69051 71252 . + 0 ID=cds-WP_223958665.1;Parent=gene-LDO45_RS00290;Dbxref=GenBank:WP_223958665.1;Name=WP_223958665.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217133.1;locus_tag=LDO45_RS00290;product=glycoside hydrolase family 3 C-terminal domain-containing protein;protein_id=WP_223958665.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 71367 72614 . - . ID=gene-LDO45_RS00295;Name=LDO45_RS00295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00295;old_locus_tag=BDI4_10064 NZ_CAJZAS010000001.1 Protein Homology CDS 71367 72614 . - 0 ID=cds-WP_223958667.1;Parent=gene-LDO45_RS00295;Dbxref=GenBank:WP_223958667.1;Name=WP_223958667.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658636.1;locus_tag=LDO45_RS00295;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_223958667.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 72725 73444 . + . ID=gene-LDO45_RS00300;Name=LDO45_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00300;old_locus_tag=BDI4_10065 NZ_CAJZAS010000001.1 Protein Homology CDS 72725 73444 . + 0 ID=cds-WP_223958669.1;Parent=gene-LDO45_RS00300;Dbxref=GenBank:WP_223958669.1;Name=WP_223958669.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403731.1;locus_tag=LDO45_RS00300;product=class I SAM-dependent methyltransferase;protein_id=WP_223958669.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 73490 73924 . - . ID=gene-LDO45_RS00305;Name=LDO45_RS00305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00305;old_locus_tag=BDI4_10066 NZ_CAJZAS010000001.1 Protein Homology CDS 73490 73924 . - 0 ID=cds-WP_374109500.1;Parent=gene-LDO45_RS00305;Dbxref=GenBank:WP_374109500.1;Name=WP_374109500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365896.1;locus_tag=LDO45_RS00305;product=excinuclease ABC subunit A;protein_id=WP_374109500.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 73936 74361 . - . ID=gene-LDO45_RS00310;Name=LDO45_RS00310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00310;old_locus_tag=BDI4_10067 NZ_CAJZAS010000001.1 Protein Homology CDS 73936 74361 . - 0 ID=cds-WP_059689940.1;Parent=gene-LDO45_RS00310;Dbxref=GenBank:WP_059689940.1;Name=WP_059689940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403733.1;locus_tag=LDO45_RS00310;product=hypothetical protein;protein_id=WP_059689940.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 74394 75614 . - . ID=gene-LDO45_RS00315;Name=LDO45_RS00315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00315;old_locus_tag=BDI4_10068 NZ_CAJZAS010000001.1 Protein Homology CDS 74394 75614 . - 0 ID=cds-WP_223958671.1;Parent=gene-LDO45_RS00315;Dbxref=GenBank:WP_223958671.1;Name=WP_223958671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725835.1;locus_tag=LDO45_RS00315;product=beta-ketoacyl synthase N-terminal-like domain-containing protein;protein_id=WP_223958671.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 75611 76840 . - . ID=gene-LDO45_RS00320;Name=LDO45_RS00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00320;old_locus_tag=BDI4_10069 NZ_CAJZAS010000001.1 Protein Homology CDS 75611 76840 . - 0 ID=cds-WP_059525126.1;Parent=gene-LDO45_RS00320;Dbxref=GenBank:WP_059525126.1;Name=WP_059525126.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760532.1;locus_tag=LDO45_RS00320;product=beta-ketoacyl-ACP synthase;protein_id=WP_059525126.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 76840 77565 . - . ID=gene-LDO45_RS00325;Name=LDO45_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00325;old_locus_tag=BDI4_10070 NZ_CAJZAS010000001.1 Protein Homology CDS 76840 77565 . - 0 ID=cds-WP_059525124.1;Parent=gene-LDO45_RS00325;Dbxref=GenBank:WP_059525124.1;Name=WP_059525124.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658630.1;locus_tag=LDO45_RS00325;product=3-ketoacyl-ACP reductase FabG2;protein_id=WP_059525124.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 77562 78065 . - . ID=gene-LDO45_RS00330;Name=LDO45_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00330;old_locus_tag=BDI4_10071 NZ_CAJZAS010000001.1 Protein Homology CDS 77562 78065 . - 0 ID=cds-WP_223958673.1;Parent=gene-LDO45_RS00330;Dbxref=GenBank:WP_223958673.1;Name=WP_223958673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402440.1;locus_tag=LDO45_RS00330;product=hotdog family protein;protein_id=WP_223958673.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 78067 79254 . - . ID=gene-LDO45_RS00335;Name=LDO45_RS00335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00335;old_locus_tag=BDI4_10072 NZ_CAJZAS010000001.1 Protein Homology CDS 78067 79254 . - 0 ID=cds-WP_223958675.1;Parent=gene-LDO45_RS00335;Dbxref=GenBank:WP_223958675.1;Name=WP_223958675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415747.1;locus_tag=LDO45_RS00335;product=beta-ketoacyl-[acyl-carrier-protein] synthase family protein;protein_id=WP_223958675.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 79251 81662 . - . ID=gene-LDO45_RS00340;Name=LDO45_RS00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00340;old_locus_tag=BDI4_10073 NZ_CAJZAS010000001.1 Protein Homology CDS 79251 81662 . - 0 ID=cds-WP_223958677.1;Parent=gene-LDO45_RS00340;Dbxref=GenBank:WP_223958677.1;Name=WP_223958677.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402442.1;locus_tag=LDO45_RS00340;product=MMPL family transporter;protein_id=WP_223958677.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 81662 82330 . - . ID=gene-LDO45_RS00345;Name=LDO45_RS00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00345;old_locus_tag=BDI4_10074 NZ_CAJZAS010000001.1 Protein Homology CDS 81662 82330 . - 0 ID=cds-WP_223958679.1;Parent=gene-LDO45_RS00345;Dbxref=GenBank:WP_223958679.1;Name=WP_223958679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415771.1;locus_tag=LDO45_RS00345;product=outer membrane lipoprotein carrier protein LolA;protein_id=WP_223958679.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 82321 82749 . - . ID=gene-LDO45_RS00350;Name=LDO45_RS00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00350;old_locus_tag=BDI4_10075 NZ_CAJZAS010000001.1 Protein Homology CDS 82321 82749 . - 0 ID=cds-WP_059525117.1;Parent=gene-LDO45_RS00350;Dbxref=GenBank:WP_059525117.1;Name=WP_059525117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880092.1;locus_tag=LDO45_RS00350;product=thioesterase family protein;protein_id=WP_059525117.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 82746 84356 . - . ID=gene-LDO45_RS00355;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=LDO45_RS00355;old_locus_tag=BDI4_10076 NZ_CAJZAS010000001.1 Protein Homology CDS 82746 84356 . - 0 ID=cds-WP_059525682.1;Parent=gene-LDO45_RS00355;Dbxref=GenBank:WP_059525682.1;Name=WP_059525682.1;Ontology_term=GO:0006548,GO:0004397;gbkey=CDS;gene=hutH;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415743.1;locus_tag=LDO45_RS00355;product=histidine ammonia-lyase;protein_id=WP_059525682.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 84343 86049 . - . ID=gene-LDO45_RS00360;Name=LDO45_RS00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00360;old_locus_tag=BDI4_10077 NZ_CAJZAS010000001.1 Protein Homology CDS 84343 86049 . - 0 ID=cds-WP_223958681.1;Parent=gene-LDO45_RS00360;Dbxref=GenBank:WP_223958681.1;Name=WP_223958681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758591.1;locus_tag=LDO45_RS00360;product=glycosyltransferase;protein_id=WP_223958681.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 86046 87737 . - . ID=gene-LDO45_RS00365;Name=LDO45_RS00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00365;old_locus_tag=BDI4_10078 NZ_CAJZAS010000001.1 Protein Homology CDS 86046 87737 . - 0 ID=cds-WP_223958683.1;Parent=gene-LDO45_RS00365;Dbxref=GenBank:WP_223958683.1;Name=WP_223958683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410245.1;locus_tag=LDO45_RS00365;product=AMP-binding protein;protein_id=WP_223958683.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 87734 88369 . - . ID=gene-LDO45_RS00370;Name=LDO45_RS00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00370;old_locus_tag=BDI4_10079 NZ_CAJZAS010000001.1 Protein Homology CDS 87734 88369 . - 0 ID=cds-WP_059525111.1;Parent=gene-LDO45_RS00370;Dbxref=GenBank:WP_059525111.1;Name=WP_059525111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403745.1;locus_tag=LDO45_RS00370;product=hypothetical protein;protein_id=WP_059525111.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 88372 88620 . - . ID=gene-LDO45_RS00375;Name=LDO45_RS00375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00375;old_locus_tag=BDI4_10080 NZ_CAJZAS010000001.1 Protein Homology CDS 88372 88620 . - 0 ID=cds-WP_059689931.1;Parent=gene-LDO45_RS00375;Dbxref=GenBank:WP_059689931.1;Name=WP_059689931.1;Ontology_term=GO:0006633;gbkey=CDS;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658620.1;locus_tag=LDO45_RS00375;product=acyl carrier protein;protein_id=WP_059689931.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 88617 88922 . - . ID=gene-LDO45_RS00380;Name=LDO45_RS00380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00380;old_locus_tag=BDI4_10081 NZ_CAJZAS010000001.1 Protein Homology CDS 88617 88922 . - 0 ID=cds-WP_059525678.1;Parent=gene-LDO45_RS00380;Dbxref=GenBank:WP_059525678.1;Name=WP_059525678.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402450.1;locus_tag=LDO45_RS00380;product=phosphopantetheine-binding protein;protein_id=WP_059525678.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 88897 89691 . - . ID=gene-LDO45_RS00385;Name=LDO45_RS00385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00385;old_locus_tag=BDI4_10082 NZ_CAJZAS010000001.1 Protein Homology CDS 88897 89691 . - 0 ID=cds-WP_223958685.1;Parent=gene-LDO45_RS00385;Dbxref=GenBank:WP_223958685.1;Name=WP_223958685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758586.1;locus_tag=LDO45_RS00385;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=WP_223958685.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 89675 90361 . - . ID=gene-LDO45_RS00390;Name=LDO45_RS00390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00390;old_locus_tag=BDI4_10083 NZ_CAJZAS010000001.1 Protein Homology CDS 89675 90361 . - 0 ID=cds-WP_059689929.1;Parent=gene-LDO45_RS00390;Dbxref=GenBank:WP_059689929.1;Name=WP_059689929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402452.1;locus_tag=LDO45_RS00390;product=beta-ketoacyl synthase chain length factor;protein_id=WP_059689929.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 90797 91384 . + . ID=gene-LDO45_RS00395;Name=LDO45_RS00395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00395;old_locus_tag=BDI4_10085 NZ_CAJZAS010000001.1 Protein Homology CDS 90797 91384 . + 0 ID=cds-WP_223958694.1;Parent=gene-LDO45_RS00395;Dbxref=GenBank:WP_223958694.1;Name=WP_223958694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479209.1;locus_tag=LDO45_RS00395;product=YigZ family protein;protein_id=WP_223958694.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 91594 91881 . + . ID=gene-LDO45_RS00400;Name=LDO45_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00400;old_locus_tag=BDI4_10086 NZ_CAJZAS010000001.1 Protein Homology CDS 91594 91881 . + 0 ID=cds-WP_223958701.1;Parent=gene-LDO45_RS00400;Dbxref=GenBank:WP_223958701.1;Name=WP_223958701.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365879.1;locus_tag=LDO45_RS00400;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_223958701.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 91937 92887 . - . ID=gene-LDO45_RS00405;Name=ppk2;gbkey=Gene;gene=ppk2;gene_biotype=protein_coding;locus_tag=LDO45_RS00405;old_locus_tag=BDI4_10087 NZ_CAJZAS010000001.1 Protein Homology CDS 91937 92887 . - 0 ID=cds-WP_223958703.1;Parent=gene-LDO45_RS00405;Dbxref=GenBank:WP_223958703.1;Name=WP_223958703.1;Ontology_term=GO:0006793,GO:0008976;gbkey=CDS;gene=ppk2;go_function=polyphosphate kinase activity|0008976||IEA;go_process=phosphorus metabolic process|0006793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547877.1;locus_tag=LDO45_RS00405;product=polyphosphate kinase 2;protein_id=WP_223958703.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 93132 94853 . - . ID=gene-LDO45_RS00410;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=LDO45_RS00410;old_locus_tag=BDI4_10088 NZ_CAJZAS010000001.1 Protein Homology CDS 93132 94853 . - 0 ID=cds-WP_059525097.1;Parent=gene-LDO45_RS00410;Dbxref=GenBank:WP_059525097.1;Name=WP_059525097.1;Ontology_term=GO:0006750,GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione biosynthetic process|0006750||IEA,glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402458.1;locus_tag=LDO45_RS00410;product=gamma-glutamyltransferase;protein_id=WP_059525097.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 95254 95778 . + . ID=gene-LDO45_RS00415;Name=LDO45_RS00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00415;old_locus_tag=BDI4_10089 NZ_CAJZAS010000001.1 Protein Homology CDS 95254 95778 . + 0 ID=cds-WP_223958705.1;Parent=gene-LDO45_RS00415;Dbxref=GenBank:WP_223958705.1;Name=WP_223958705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217137.1;locus_tag=LDO45_RS00415;product=metal-dependent hydrolase;protein_id=WP_223958705.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 96061 100557 . + . ID=gene-LDO45_RS00420;Name=LDO45_RS00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00420;old_locus_tag=BDI4_10090 NZ_CAJZAS010000001.1 Protein Homology CDS 96061 100557 . + 0 ID=cds-WP_223958707.1;Parent=gene-LDO45_RS00420;Dbxref=GenBank:WP_223958707.1;Name=WP_223958707.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658611.1;locus_tag=LDO45_RS00420;product=DEAD/DEAH box helicase;protein_id=WP_223958707.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 100689 101963 . + . ID=gene-LDO45_RS00425;Name=LDO45_RS00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00425;old_locus_tag=BDI4_10091 NZ_CAJZAS010000001.1 Protein Homology CDS 100689 101963 . + 0 ID=cds-WP_223958709.1;Parent=gene-LDO45_RS00425;Dbxref=GenBank:WP_223958709.1;Name=WP_223958709.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365875.1;locus_tag=LDO45_RS00425;product=APC family permease;protein_id=WP_223958709.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 102060 102356 . - . ID=gene-LDO45_RS00430;Name=LDO45_RS00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00430;old_locus_tag=BDI4_10092 NZ_CAJZAS010000001.1 Protein Homology CDS 102060 102356 . - 0 ID=cds-WP_223958711.1;Parent=gene-LDO45_RS00430;Dbxref=GenBank:WP_223958711.1;Name=WP_223958711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089411.1;locus_tag=LDO45_RS00430;product=helix-turn-helix domain-containing protein;protein_id=WP_223958711.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 102427 102786 . - . ID=gene-LDO45_RS00435;Name=LDO45_RS00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00435;old_locus_tag=BDI4_10093 NZ_CAJZAS010000001.1 Protein Homology CDS 102427 102786 . - 0 ID=cds-WP_223958713.1;Parent=gene-LDO45_RS00435;Dbxref=GenBank:WP_223958713.1;Name=WP_223958713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365873.1;locus_tag=LDO45_RS00435;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_223958713.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 102921 103907 . - . ID=gene-LDO45_RS00440;Name=pcaQ;gbkey=Gene;gene=pcaQ;gene_biotype=protein_coding;locus_tag=LDO45_RS00440;old_locus_tag=BDI4_10094 NZ_CAJZAS010000001.1 Protein Homology CDS 102921 103907 . - 0 ID=cds-WP_059525087.1;Parent=gene-LDO45_RS00440;Dbxref=GenBank:WP_059525087.1;Name=WP_059525087.1;Ontology_term=GO:0019619,GO:0045893,GO:0003677;gbkey=CDS;gene=pcaQ;go_function=DNA binding|0003677||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA,positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495024.1;locus_tag=LDO45_RS00440;product=pca operon transcription factor PcaQ;protein_id=WP_059525087.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 103985 104722 . - . ID=gene-LDO45_RS00445;Name=LDO45_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00445;old_locus_tag=BDI4_10095 NZ_CAJZAS010000001.1 Protein Homology CDS 103985 104722 . - 0 ID=cds-WP_223958717.1;Parent=gene-LDO45_RS00445;Dbxref=GenBank:WP_223958717.1;Name=WP_223958717.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758574.1;locus_tag=LDO45_RS00445;product=helix-turn-helix domain-containing protein;protein_id=WP_223958717.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 104843 105406 . + . ID=gene-LDO45_RS00450;Name=LDO45_RS00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00450;old_locus_tag=BDI4_10097 NZ_CAJZAS010000001.1 Protein Homology CDS 104843 105406 . + 0 ID=cds-WP_223958719.1;Parent=gene-LDO45_RS00450;Dbxref=GenBank:WP_223958719.1;Name=WP_223958719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751196.1;locus_tag=LDO45_RS00450;product=YiiX/YebB-like N1pC/P60 family cysteine hydrolase;protein_id=WP_223958719.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 105700 106407 . + . ID=gene-LDO45_RS00455;Name=pcaH;gbkey=Gene;gene=pcaH;gene_biotype=protein_coding;locus_tag=LDO45_RS00455;old_locus_tag=BDI4_10096 NZ_CAJZAS010000001.1 Protein Homology CDS 105700 106407 . + 0 ID=cds-WP_059525082.1;Parent=gene-LDO45_RS00455;Dbxref=GenBank:WP_059525082.1;Name=WP_059525082.1;Ontology_term=GO:0046278,GO:0005506,GO:0018578;gbkey=CDS;gene=pcaH;go_function=iron ion binding|0005506||IEA,protocatechuate 3%2C4-dioxygenase activity|0018578||IEA;go_process=3%2C4-dihydroxybenzoate metabolic process|0046278||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725036.1;locus_tag=LDO45_RS00455;product=protocatechuate 3%2C4-dioxygenase subunit beta;protein_id=WP_059525082.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 106411 107004 . + . ID=gene-LDO45_RS00460;Name=pcaG;gbkey=Gene;gene=pcaG;gene_biotype=protein_coding;locus_tag=LDO45_RS00460;old_locus_tag=BDI4_10099 NZ_CAJZAS010000001.1 Protein Homology CDS 106411 107004 . + 0 ID=cds-WP_223958721.1;Parent=gene-LDO45_RS00460;Dbxref=GenBank:WP_223958721.1;Name=WP_223958721.1;Ontology_term=GO:0046278,GO:0005506,GO:0018578;gbkey=CDS;gene=pcaG;go_function=iron ion binding|0005506||IEA,protocatechuate 3%2C4-dioxygenase activity|0018578||IEA;go_process=3%2C4-dihydroxybenzoate metabolic process|0046278||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899603.1;locus_tag=LDO45_RS00460;product=protocatechuate 3%2C4-dioxygenase subunit alpha;protein_id=WP_223958721.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 107465 108244 . - . ID=gene-LDO45_RS00465;Name=LDO45_RS00465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00465;old_locus_tag=BDI4_10100 NZ_CAJZAS010000001.1 Protein Homology CDS 107465 108244 . - 0 ID=cds-WP_223958723.1;Parent=gene-LDO45_RS00465;Dbxref=GenBank:WP_223958723.1;Name=WP_223958723.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882012.1;locus_tag=LDO45_RS00465;product=helix-turn-helix domain-containing protein;protein_id=WP_223958723.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 108472 109299 . - . ID=gene-LDO45_RS00470;Name=LDO45_RS00470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00470;old_locus_tag=BDI4_10101 NZ_CAJZAS010000001.1 Protein Homology CDS 108472 109299 . - 0 ID=cds-WP_059598884.1;Parent=gene-LDO45_RS00470;Dbxref=GenBank:WP_059598884.1;Name=WP_059598884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495030.1;locus_tag=LDO45_RS00470;product=M55 family metallopeptidase;protein_id=WP_059598884.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 109296 110378 . - . ID=gene-LDO45_RS00475;Name=LDO45_RS00475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00475;old_locus_tag=BDI4_10102 NZ_CAJZAS010000001.1 Protein Homology CDS 109296 110378 . - 0 ID=cds-WP_223958725.1;Parent=gene-LDO45_RS00475;Dbxref=GenBank:WP_223958725.1;Name=WP_223958725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658595.1;locus_tag=LDO45_RS00475;product=P1 family peptidase;protein_id=WP_223958725.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 110378 111271 . - . ID=gene-LDO45_RS00480;Name=gsiD;gbkey=Gene;gene=gsiD;gene_biotype=protein_coding;locus_tag=LDO45_RS00480;old_locus_tag=BDI4_10103 NZ_CAJZAS010000001.1 Protein Homology CDS 110378 111271 . - 0 ID=cds-WP_223958727.1;Parent=gene-LDO45_RS00480;Dbxref=GenBank:WP_223958727.1;Name=WP_223958727.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiD;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765762.1;locus_tag=LDO45_RS00480;product=glutathione ABC transporter permease GsiD;protein_id=WP_223958727.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 111285 112205 . - . ID=gene-LDO45_RS00485;Name=gsiC;gbkey=Gene;gene=gsiC;gene_biotype=protein_coding;locus_tag=LDO45_RS00485;old_locus_tag=BDI4_10104 NZ_CAJZAS010000001.1 Protein Homology CDS 111285 112205 . - 0 ID=cds-WP_059525070.1;Parent=gene-LDO45_RS00485;Dbxref=GenBank:WP_059525070.1;Name=WP_059525070.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=gsiC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765761.1;locus_tag=LDO45_RS00485;product=glutathione ABC transporter permease GsiC;protein_id=WP_059525070.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 112273 113835 . - . ID=gene-LDO45_RS00490;Name=gsiB;gbkey=Gene;gene=gsiB;gene_biotype=protein_coding;locus_tag=LDO45_RS00490;old_locus_tag=BDI4_10105 NZ_CAJZAS010000001.1 Protein Homology CDS 112273 113835 . - 0 ID=cds-WP_059525068.1;Parent=gene-LDO45_RS00490;Dbxref=GenBank:WP_059525068.1;Name=WP_059525068.1;Ontology_term=GO:0034775,GO:0034634,GO:0043190;gbkey=CDS;gene=gsiB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=glutathione transmembrane transporter activity|0034634||IEA;go_process=glutathione transmembrane transport|0034775||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603960.1;locus_tag=LDO45_RS00490;product=glutathione ABC transporter substrate-binding protein GsiB;protein_id=WP_059525068.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 113965 115893 . - . ID=gene-LDO45_RS00495;Name=LDO45_RS00495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00495;old_locus_tag=BDI4_10106 NZ_CAJZAS010000001.1 Protein Homology CDS 113965 115893 . - 0 ID=cds-WP_223958729.1;Parent=gene-LDO45_RS00495;Dbxref=GenBank:WP_223958729.1;Name=WP_223958729.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495033.1;locus_tag=LDO45_RS00495;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_223958729.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 115921 116907 . - . ID=gene-LDO45_RS00500;Name=LDO45_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00500;old_locus_tag=BDI4_10107 NZ_CAJZAS010000001.1 Protein Homology CDS 115921 116907 . - 0 ID=cds-WP_223958731.1;Parent=gene-LDO45_RS00500;Dbxref=GenBank:WP_223958731.1;Name=WP_223958731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482631.1;locus_tag=LDO45_RS00500;product=isoaspartyl peptidase/L-asparaginase family protein;protein_id=WP_223958731.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 116904 117860 . - . ID=gene-LDO45_RS00505;Name=LDO45_RS00505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00505;old_locus_tag=BDI4_10108 NZ_CAJZAS010000001.1 Protein Homology CDS 116904 117860 . - 0 ID=cds-WP_223958733.1;Parent=gene-LDO45_RS00505;Dbxref=GenBank:WP_223958733.1;Name=WP_223958733.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482638.1;locus_tag=LDO45_RS00505;product=MurR/RpiR family transcriptional regulator;protein_id=WP_223958733.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 118311 119582 . + . ID=gene-LDO45_RS00510;Name=LDO45_RS00510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00510;old_locus_tag=BDI4_10110 NZ_CAJZAS010000001.1 Protein Homology CDS 118311 119582 . + 0 ID=cds-WP_059525059.1;Parent=gene-LDO45_RS00510;Dbxref=GenBank:WP_059525059.1;Name=WP_059525059.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365860.1;locus_tag=LDO45_RS00510;product=MFS transporter;protein_id=WP_059525059.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 119610 122030 . + . ID=gene-LDO45_RS00515;Name=LDO45_RS00515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00515;old_locus_tag=BDI4_10111 NZ_CAJZAS010000001.1 Protein Homology CDS 119610 122030 . + 0 ID=cds-WP_223958735.1;Parent=gene-LDO45_RS00515;Dbxref=GenBank:WP_223958735.1;Name=WP_223958735.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751209.1;locus_tag=LDO45_RS00515;product=glycoside hydrolase family 31 protein;protein_id=WP_223958735.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 122152 123339 . + . ID=gene-LDO45_RS00520;Name=LDO45_RS00520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00520;old_locus_tag=BDI4_10112 NZ_CAJZAS010000001.1 Protein Homology CDS 122152 123339 . + 0 ID=cds-WP_223958750.1;Parent=gene-LDO45_RS00520;Dbxref=GenBank:WP_223958750.1;Name=WP_223958750.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479241.1;locus_tag=LDO45_RS00520;product=porin;protein_id=WP_223958750.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 123623 125644 . + . ID=gene-LDO45_RS00525;Name=LDO45_RS00525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00525;old_locus_tag=BDI4_10113 NZ_CAJZAS010000001.1 Protein Homology CDS 123623 125644 . + 0 ID=cds-WP_059525053.1;Parent=gene-LDO45_RS00525;Dbxref=GenBank:WP_059525053.1;Name=WP_059525053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467890.1;locus_tag=LDO45_RS00525;product=BCCT family transporter;protein_id=WP_059525053.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 125703 126014 . + . ID=gene-LDO45_RS00530;Name=LDO45_RS00530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00530;old_locus_tag=BDI4_10114 NZ_CAJZAS010000001.1 Protein Homology CDS 125703 126014 . + 0 ID=cds-WP_059700134.1;Parent=gene-LDO45_RS00530;Dbxref=GenBank:WP_059700134.1;Name=WP_059700134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416050.1;locus_tag=LDO45_RS00530;product=hypothetical protein;protein_id=WP_059700134.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 126105 126953 . - . ID=gene-LDO45_RS00535;Name=LDO45_RS00535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00535;old_locus_tag=BDI4_10115 NZ_CAJZAS010000001.1 Protein Homology CDS 126105 126953 . - 0 ID=cds-WP_223958752.1;Parent=gene-LDO45_RS00535;Dbxref=GenBank:WP_223958752.1;Name=WP_223958752.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547910.1;locus_tag=LDO45_RS00535;product=class I SAM-dependent methyltransferase;protein_id=WP_223958752.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 127136 128599 . + . ID=gene-LDO45_RS00540;Name=LDO45_RS00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00540;old_locus_tag=BDI4_10116 NZ_CAJZAS010000001.1 Protein Homology CDS 127136 128599 . + 0 ID=cds-WP_223958754.1;Parent=gene-LDO45_RS00540;Dbxref=GenBank:WP_223958754.1;Name=WP_223958754.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488720.1;locus_tag=LDO45_RS00540;product=metallophosphoesterase;protein_id=WP_223958754.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 128656 130098 . + . ID=gene-LDO45_RS00545;Name=LDO45_RS00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00545;old_locus_tag=BDI4_10117 NZ_CAJZAS010000001.1 Protein Homology CDS 128656 130098 . + 0 ID=cds-WP_374109501.1;Parent=gene-LDO45_RS00545;Dbxref=GenBank:WP_374109501.1;Name=WP_374109501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765753.1;locus_tag=LDO45_RS00545;product=cytochrome-c peroxidase;protein_id=WP_374109501.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 130197 130472 . + . ID=gene-LDO45_RS00550;Name=LDO45_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00550;old_locus_tag=BDI4_10118 NZ_CAJZAS010000001.1 Protein Homology CDS 130197 130472 . + 0 ID=cds-WP_059525043.1;Parent=gene-LDO45_RS00550;Dbxref=GenBank:WP_059525043.1;Name=WP_059525043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217152.1;locus_tag=LDO45_RS00550;product=hypothetical protein;protein_id=WP_059525043.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 130668 131090 . - . ID=gene-LDO45_RS00555;Name=LDO45_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00555;old_locus_tag=BDI4_10119 NZ_CAJZAS010000001.1 Protein Homology CDS 130668 131090 . - 0 ID=cds-WP_059689909.1;Parent=gene-LDO45_RS00555;Dbxref=GenBank:WP_059689909.1;Name=WP_059689909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488715.1;locus_tag=LDO45_RS00555;product=DUF6691 family protein;protein_id=WP_059689909.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 131092 131526 . - . ID=gene-LDO45_RS00560;Name=LDO45_RS00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00560;old_locus_tag=BDI4_10120 NZ_CAJZAS010000001.1 Protein Homology CDS 131092 131526 . - 0 ID=cds-WP_175914838.1;Parent=gene-LDO45_RS00560;Dbxref=GenBank:WP_175914838.1;Name=WP_175914838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524275.1;locus_tag=LDO45_RS00560;product=YeeE/YedE family protein;protein_id=WP_175914838.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 131516 131866 . - . ID=gene-LDO45_RS00565;Name=LDO45_RS00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00565;old_locus_tag=BDI4_10121 NZ_CAJZAS010000001.1 Protein Homology CDS 131516 131866 . - 0 ID=cds-WP_059525037.1;Parent=gene-LDO45_RS00565;Dbxref=GenBank:WP_059525037.1;Name=WP_059525037.1;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365849.1;locus_tag=LDO45_RS00565;product=helix-turn-helix transcriptional regulator;protein_id=WP_059525037.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 131986 133347 . - . ID=gene-LDO45_RS00570;Name=LDO45_RS00570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00570;old_locus_tag=BDI4_10122 NZ_CAJZAS010000001.1 Protein Homology CDS 131986 133347 . - 0 ID=cds-WP_223958768.1;Parent=gene-LDO45_RS00570;Dbxref=GenBank:WP_223958768.1;Name=WP_223958768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338324.1;locus_tag=LDO45_RS00570;product=aromatic acid/H+ symport family MFS transporter;protein_id=WP_223958768.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 133424 134632 . - . ID=gene-LDO45_RS00575;Name=LDO45_RS00575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00575;old_locus_tag=BDI4_10123 NZ_CAJZAS010000001.1 Protein Homology CDS 133424 134632 . - 0 ID=cds-WP_223958770.1;Parent=gene-LDO45_RS00575;Dbxref=GenBank:WP_223958770.1;Name=WP_223958770.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899626.1;locus_tag=LDO45_RS00575;product=3-hydroxybenzoate 6-monooxygenase;protein_id=WP_223958770.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 134652 135293 . - . ID=gene-LDO45_RS00580;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=LDO45_RS00580;old_locus_tag=BDI4_10124 NZ_CAJZAS010000001.1 Protein Homology CDS 134652 135293 . - 0 ID=cds-WP_223958772.1;Parent=gene-LDO45_RS00580;Dbxref=GenBank:WP_223958772.1;Name=WP_223958772.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034,GO:0005737;gbkey=CDS;gene=maiA;go_component=cytoplasm|0005737||IEA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338326.1;locus_tag=LDO45_RS00580;product=maleylacetoacetate isomerase;protein_id=WP_223958772.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 135328 136026 . - . ID=gene-LDO45_RS00585;Name=LDO45_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00585;old_locus_tag=BDI4_10125 NZ_CAJZAS010000001.1 Protein Homology CDS 135328 136026 . - 0 ID=cds-WP_059525029.1;Parent=gene-LDO45_RS00585;Dbxref=GenBank:WP_059525029.1;Name=WP_059525029.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411788.1;locus_tag=LDO45_RS00585;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_059525029.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 136126 137172 . - . ID=gene-LDO45_RS00590;Name=gtdA;gbkey=Gene;gene=gtdA;gene_biotype=protein_coding;locus_tag=LDO45_RS00590;old_locus_tag=BDI4_10126 NZ_CAJZAS010000001.1 Protein Homology CDS 136126 137172 . - 0 ID=cds-WP_223958774.1;Parent=gene-LDO45_RS00590;Dbxref=GenBank:WP_223958774.1;Name=WP_223958774.1;Ontology_term=GO:0047922;gbkey=CDS;gene=gtdA;go_function=gentisate 1%2C2-dioxygenase activity|0047922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403780.1;locus_tag=LDO45_RS00590;product=gentisate 1%2C2-dioxygenase;protein_id=WP_223958774.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 137337 138281 . + . ID=gene-LDO45_RS00595;Name=LDO45_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00595;old_locus_tag=BDI4_10127 NZ_CAJZAS010000001.1 Protein Homology CDS 137337 138281 . + 0 ID=cds-WP_059689902.1;Parent=gene-LDO45_RS00595;Dbxref=GenBank:WP_059689902.1;Name=WP_059689902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338329.1;locus_tag=LDO45_RS00595;product=LysR substrate-binding domain-containing protein;protein_id=WP_059689902.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 138328 139674 . - . ID=gene-LDO45_RS00600;Name=LDO45_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00600;old_locus_tag=BDI4_10128 NZ_CAJZAS010000001.1 Protein Homology CDS 138328 139674 . - 0 ID=cds-WP_223958776.1;Parent=gene-LDO45_RS00600;Dbxref=GenBank:WP_223958776.1;Name=WP_223958776.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658576.1;locus_tag=LDO45_RS00600;product=FAD/NAD(P)-binding oxidoreductase;protein_id=WP_223958776.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 139671 139904 . - . ID=gene-LDO45_RS00605;Name=LDO45_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00605;old_locus_tag=BDI4_10129 NZ_CAJZAS010000001.1 Protein Homology CDS 139671 139904 . - 0 ID=cds-WP_011658575.1;Parent=gene-LDO45_RS00605;Dbxref=GenBank:WP_011658575.1;Name=WP_011658575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028982.1;locus_tag=LDO45_RS00605;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_011658575.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 139901 141028 . - . ID=gene-LDO45_RS00610;Name=LDO45_RS00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00610;old_locus_tag=BDI4_10130 NZ_CAJZAS010000001.1 Protein Homology CDS 139901 141028 . - 0 ID=cds-WP_223958778.1;Parent=gene-LDO45_RS00610;Dbxref=GenBank:WP_223958778.1;Name=WP_223958778.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754887.1;locus_tag=LDO45_RS00610;product=FAD-binding oxidoreductase;protein_id=WP_223958778.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 141025 141957 . - . ID=gene-LDO45_RS00615;Name=LDO45_RS00615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00615;old_locus_tag=BDI4_10131 NZ_CAJZAS010000001.1 Protein Homology CDS 141025 141957 . - 0 ID=cds-WP_059689898.1;Parent=gene-LDO45_RS00615;Dbxref=GenBank:WP_059689898.1;Name=WP_059689898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028984.1;locus_tag=LDO45_RS00615;product=4-hydroxyproline epimerase;protein_id=WP_059689898.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 142563 144188 . + . ID=gene-LDO45_RS00620;Name=LDO45_RS00620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00620;old_locus_tag=BDI4_10134 NZ_CAJZAS010000001.1 Protein Homology CDS 142563 144188 . + 0 ID=cds-WP_059525015.1;Parent=gene-LDO45_RS00620;Dbxref=GenBank:WP_059525015.1;Name=WP_059525015.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603558.1;locus_tag=LDO45_RS00620;product=APC family permease;protein_id=WP_059525015.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 144259 145851 . + . ID=gene-LDO45_RS00625;Name=LDO45_RS00625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00625;old_locus_tag=BDI4_10135 NZ_CAJZAS010000001.1 Protein Homology CDS 144259 145851 . + 0 ID=cds-WP_223958780.1;Parent=gene-LDO45_RS00625;Dbxref=GenBank:WP_223958780.1;Name=WP_223958780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754884.1;locus_tag=LDO45_RS00625;product=aldehyde dehydrogenase (NADP(+));protein_id=WP_223958780.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 145844 146866 . + . ID=gene-LDO45_RS00630;Name=LDO45_RS00630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00630;old_locus_tag=BDI4_10136 NZ_CAJZAS010000001.1 Protein Homology CDS 145844 146866 . + 0 ID=cds-WP_223958788.1;Parent=gene-LDO45_RS00630;Dbxref=GenBank:WP_223958788.1;Name=WP_223958788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754883.1;locus_tag=LDO45_RS00630;product=Ldh family oxidoreductase;protein_id=WP_223958788.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 147133 148992 . + . ID=gene-LDO45_RS00635;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=LDO45_RS00635;old_locus_tag=BDI4_10137 NZ_CAJZAS010000001.1 Protein Homology CDS 147133 148992 . + 0 ID=cds-WP_223958790.1;Parent=gene-LDO45_RS00635;Dbxref=GenBank:WP_223958790.1;Name=WP_223958790.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013952014.1;locus_tag=LDO45_RS00635;product=dihydroxy-acid dehydratase;protein_id=WP_223958790.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 149109 149921 . - . ID=gene-LDO45_RS00640;Name=LDO45_RS00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00640;old_locus_tag=BDI4_10138 NZ_CAJZAS010000001.1 Protein Homology CDS 149109 149921 . - 0 ID=cds-WP_223958793.1;Parent=gene-LDO45_RS00640;Dbxref=GenBank:WP_223958793.1;Name=WP_223958793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725072.1;locus_tag=LDO45_RS00640;product=SH3 domain-containing protein;protein_id=WP_223958793.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 149955 150380 . - . ID=gene-LDO45_RS00645;Name=LDO45_RS00645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00645;old_locus_tag=BDI4_10139 NZ_CAJZAS010000001.1 Protein Homology CDS 149955 150380 . - 0 ID=cds-WP_059596238.1;Parent=gene-LDO45_RS00645;Dbxref=GenBank:WP_059596238.1;Name=WP_059596238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547931.1;locus_tag=LDO45_RS00645;product=hypothetical protein;protein_id=WP_059596238.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 150690 152243 . + . ID=gene-LDO45_RS00650;Name=LDO45_RS00650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00650;old_locus_tag=BDI4_10140 NZ_CAJZAS010000001.1 Protein Homology CDS 150690 152243 . + 0 ID=cds-WP_223958803.1;Parent=gene-LDO45_RS00650;Dbxref=GenBank:WP_223958803.1;Name=WP_223958803.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484701.1;locus_tag=LDO45_RS00650;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_223958803.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 152430 153308 . + . ID=gene-LDO45_RS00655;Name=LDO45_RS00655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00655;old_locus_tag=BDI4_10141 NZ_CAJZAS010000001.1 Protein Homology CDS 152430 153308 . + 0 ID=cds-WP_223958805.1;Parent=gene-LDO45_RS00655;Dbxref=GenBank:WP_223958805.1;Name=WP_223958805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762245.1;locus_tag=LDO45_RS00655;product=helix-hairpin-helix domain-containing protein;protein_id=WP_223958805.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 153396 153821 . - . ID=gene-LDO45_RS00660;Name=LDO45_RS00660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00660;old_locus_tag=BDI4_10142 NZ_CAJZAS010000001.1 Protein Homology CDS 153396 153821 . - 0 ID=cds-WP_223958807.1;Parent=gene-LDO45_RS00660;Dbxref=GenBank:WP_223958807.1;Name=WP_223958807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752798.1;locus_tag=LDO45_RS00660;product=helix-turn-helix domain-containing protein;protein_id=WP_223958807.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq pseudogene 153933 154076 . - . ID=gene-LDO45_RS00665;Name=LDO45_RS00665;end_range=154076,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS00665;old_locus_tag=BDI4_10143;partial=true;pseudo=true NZ_CAJZAS010000001.1 Protein Homology CDS 153933 154076 . - 0 ID=cds-LDO45_RS00665;Parent=gene-LDO45_RS00665;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=154076,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547936.1;locus_tag=LDO45_RS00665;partial=true;product=MarR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 154073 155587 . - . ID=gene-LDO45_RS00670;Name=LDO45_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00670;old_locus_tag=BDI4_10144 NZ_CAJZAS010000001.1 Protein Homology CDS 154073 155587 . - 0 ID=cds-WP_059524999.1;Parent=gene-LDO45_RS00670;Dbxref=GenBank:WP_059524999.1;Name=WP_059524999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365838.1;locus_tag=LDO45_RS00670;product=acetyl-CoA hydrolase/transferase family protein;protein_id=WP_059524999.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 156231 156911 . + . ID=gene-LDO45_RS00675;Name=LDO45_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00675;old_locus_tag=BDI4_10145 NZ_CAJZAS010000001.1 Protein Homology CDS 156231 156911 . + 0 ID=cds-WP_059524997.1;Parent=gene-LDO45_RS00675;Dbxref=GenBank:WP_059524997.1;Name=WP_059524997.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658562.1;locus_tag=LDO45_RS00675;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_059524997.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 156908 157717 . + . ID=gene-LDO45_RS00680;Name=LDO45_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00680;old_locus_tag=BDI4_10146 NZ_CAJZAS010000001.1 Protein Homology CDS 156908 157717 . + 0 ID=cds-WP_059524995.1;Parent=gene-LDO45_RS00680;Dbxref=GenBank:WP_059524995.1;Name=WP_059524995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694707.1;locus_tag=LDO45_RS00680;product=2OG-Fe(II) oxygenase;protein_id=WP_059524995.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 157714 158715 . + . ID=gene-LDO45_RS00685;Name=LDO45_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00685;old_locus_tag=BDI4_10147 NZ_CAJZAS010000001.1 Protein Homology CDS 157714 158715 . + 0 ID=cds-WP_059524993.1;Parent=gene-LDO45_RS00685;Dbxref=GenBank:WP_059524993.1;Name=WP_059524993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399831.1;locus_tag=LDO45_RS00685;product=TIGR00374 family protein;protein_id=WP_059524993.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 158752 159519 . + . ID=gene-LDO45_RS00690;Name=LDO45_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00690;old_locus_tag=BDI4_10148 NZ_CAJZAS010000001.1 Protein Homology CDS 158752 159519 . + 0 ID=cds-WP_223958811.1;Parent=gene-LDO45_RS00690;Dbxref=GenBank:WP_223958811.1;Name=WP_223958811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603691.1;locus_tag=LDO45_RS00690;product=NTP transferase domain-containing protein;protein_id=WP_223958811.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 159516 161204 . + . ID=gene-LDO45_RS00695;Name=aepX;gbkey=Gene;gene=aepX;gene_biotype=protein_coding;locus_tag=LDO45_RS00695;old_locus_tag=BDI4_10149 NZ_CAJZAS010000001.1 Protein Homology CDS 159516 161204 . + 0 ID=cds-WP_059524989.1;Parent=gene-LDO45_RS00695;Dbxref=GenBank:WP_059524989.1;Name=WP_059524989.1;Ontology_term=GO:0019634,GO:0050188;gbkey=CDS;gene=aepX;go_function=phosphoenolpyruvate mutase activity|0050188||IEA;go_process=organic phosphonate metabolic process|0019634||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004542643.1;locus_tag=LDO45_RS00695;product=phosphoenolpyruvate mutase;protein_id=WP_059524989.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 161201 162382 . + . ID=gene-LDO45_RS00700;Name=aepY;gbkey=Gene;gene=aepY;gene_biotype=protein_coding;locus_tag=LDO45_RS00700;old_locus_tag=BDI4_10150 NZ_CAJZAS010000001.1 Protein Homology CDS 161201 162382 . + 0 ID=cds-WP_223958813.1;Parent=gene-LDO45_RS00700;Dbxref=GenBank:WP_223958813.1;Name=WP_223958813.1;Ontology_term=GO:0032923,GO:0033980;gbkey=CDS;gene=aepY;go_function=phosphonopyruvate decarboxylase activity|0033980||IEA;go_process=organic phosphonate biosynthetic process|0032923||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760251.1;locus_tag=LDO45_RS00700;product=phosphonopyruvate decarboxylase;protein_id=WP_223958813.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 162382 163446 . + . ID=gene-LDO45_RS00705;Name=LDO45_RS00705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00705;old_locus_tag=BDI4_10151 NZ_CAJZAS010000001.1 Protein Homology CDS 162382 163446 . + 0 ID=cds-WP_223958815.1;Parent=gene-LDO45_RS00705;Dbxref=GenBank:WP_223958815.1;Name=WP_223958815.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187270.1;locus_tag=LDO45_RS00705;product=2-aminoethylphosphonate aminotransferase;protein_id=WP_223958815.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 163666 164223 . + . ID=gene-LDO45_RS00710;Name=LDO45_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00710;old_locus_tag=BDI4_10152 NZ_CAJZAS010000001.1 GeneMarkS-2+ CDS 163666 164223 . + 0 ID=cds-WP_223958817.1;Parent=gene-LDO45_RS00710;Dbxref=GenBank:WP_223958817.1;Name=WP_223958817.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS00710;product=hypothetical protein;protein_id=WP_223958817.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 164475 165626 . - . ID=gene-LDO45_RS00715;Name=LDO45_RS00715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00715;old_locus_tag=BDI4_10154 NZ_CAJZAS010000001.1 Protein Homology CDS 164475 165626 . - 0 ID=cds-WP_223958819.1;Parent=gene-LDO45_RS00715;Dbxref=GenBank:WP_223958819.1;Name=WP_223958819.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760246.1;locus_tag=LDO45_RS00715;product=acyltransferase;protein_id=WP_223958819.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 165662 165829 . + . ID=gene-LDO45_RS00720;Name=LDO45_RS00720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00720;old_locus_tag=BDI4_10155 NZ_CAJZAS010000001.1 GeneMarkS-2+ CDS 165662 165829 . + 0 ID=cds-WP_223958821.1;Parent=gene-LDO45_RS00720;Dbxref=GenBank:WP_223958821.1;Name=WP_223958821.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS00720;product=hypothetical protein;protein_id=WP_223958821.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 165983 166915 . + . ID=gene-LDO45_RS00725;Name=pip;gbkey=Gene;gene=pip;gene_biotype=protein_coding;locus_tag=LDO45_RS00725;old_locus_tag=BDI4_10156 NZ_CAJZAS010000001.1 Protein Homology CDS 165983 166915 . + 0 ID=cds-WP_059700084.1;Parent=gene-LDO45_RS00725;Dbxref=GenBank:WP_059700084.1;Name=WP_059700084.1;Ontology_term=GO:0030163,GO:0004177,GO:0005737;gbkey=CDS;gene=pip;go_component=cytoplasm|0005737||IEA;go_function=aminopeptidase activity|0004177||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899657.1;locus_tag=LDO45_RS00725;product=prolyl aminopeptidase;protein_id=WP_059700084.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 166974 167246 . - . ID=gene-LDO45_RS00730;Name=LDO45_RS00730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00730;old_locus_tag=BDI4_10157 NZ_CAJZAS010000001.1 Protein Homology CDS 166974 167246 . - 0 ID=cds-WP_059525674.1;Parent=gene-LDO45_RS00730;Dbxref=GenBank:WP_059525674.1;Name=WP_059525674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365826.1;locus_tag=LDO45_RS00730;product=hypothetical protein;protein_id=WP_059525674.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 167442 168500 . - . ID=gene-LDO45_RS00735;Name=LDO45_RS00735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00735;old_locus_tag=BDI4_10159 NZ_CAJZAS010000001.1 Protein Homology CDS 167442 168500 . - 0 ID=cds-WP_223958823.1;Parent=gene-LDO45_RS00735;Dbxref=GenBank:WP_223958823.1;Name=WP_223958823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355529.1;locus_tag=LDO45_RS00735;product=transglutaminase family protein;protein_id=WP_223958823.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 168494 171100 . - . ID=gene-LDO45_RS00740;Name=LDO45_RS00740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00740;old_locus_tag=BDI4_10160 NZ_CAJZAS010000001.1 Protein Homology CDS 168494 171100 . - 0 ID=cds-WP_059819636.1;Parent=gene-LDO45_RS00740;Dbxref=GenBank:WP_059819636.1;Name=WP_059819636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355530.1;locus_tag=LDO45_RS00740;product=circularly permuted type 2 ATP-grasp protein;protein_id=WP_059819636.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 171313 174741 . - . ID=gene-LDO45_RS00745;Name=LDO45_RS00745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00745;old_locus_tag=BDI4_10161 NZ_CAJZAS010000001.1 Protein Homology CDS 171313 174741 . - 0 ID=cds-WP_223958825.1;Parent=gene-LDO45_RS00745;Dbxref=GenBank:WP_223958825.1;Name=WP_223958825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495081.1;locus_tag=LDO45_RS00745;product=DUF2126 domain-containing protein;protein_id=WP_223958825.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 174835 175809 . - . ID=gene-LDO45_RS00750;Name=LDO45_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00750;old_locus_tag=BDI4_10162 NZ_CAJZAS010000001.1 Protein Homology CDS 174835 175809 . - 0 ID=cds-WP_059689879.1;Parent=gene-LDO45_RS00750;Dbxref=GenBank:WP_059689879.1;Name=WP_059689879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338363.1;locus_tag=LDO45_RS00750;product=transglutaminase family protein;protein_id=WP_059689879.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 175818 176759 . - . ID=gene-LDO45_RS00755;Name=LDO45_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00755;old_locus_tag=BDI4_10163 NZ_CAJZAS010000001.1 Protein Homology CDS 175818 176759 . - 0 ID=cds-WP_059524971.1;Parent=gene-LDO45_RS00755;Dbxref=GenBank:WP_059524971.1;Name=WP_059524971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010108140.1;locus_tag=LDO45_RS00755;product=alpha-E domain-containing protein;protein_id=WP_059524971.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 176824 178239 . - . ID=gene-LDO45_RS00760;Name=LDO45_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00760;old_locus_tag=BDI4_10164 NZ_CAJZAS010000001.1 Protein Homology CDS 176824 178239 . - 0 ID=cds-WP_059450610.1;Parent=gene-LDO45_RS00760;Dbxref=GenBank:WP_059450610.1;Name=WP_059450610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877418.1;locus_tag=LDO45_RS00760;product=circularly permuted type 2 ATP-grasp protein;protein_id=WP_059450610.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 179038 180033 . + . ID=gene-LDO45_RS00765;Name=LDO45_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00765;old_locus_tag=BDI4_10166 NZ_CAJZAS010000001.1 Protein Homology CDS 179038 180033 . + 0 ID=cds-WP_175907311.1;Parent=gene-LDO45_RS00765;Dbxref=GenBank:WP_175907311.1;Name=WP_175907311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899665.1;locus_tag=LDO45_RS00765;product=LysR substrate-binding domain-containing protein;protein_id=WP_175907311.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 180062 180298 . - . ID=gene-LDO45_RS00770;Name=LDO45_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00770 NZ_CAJZAS010000001.1 GeneMarkS-2+ CDS 180062 180298 . - 0 ID=cds-WP_223958826.1;Parent=gene-LDO45_RS00770;Dbxref=GenBank:WP_223958826.1;Name=WP_223958826.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS00770;product=hypothetical protein;protein_id=WP_223958826.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 180704 181126 . + . ID=gene-LDO45_RS00775;Name=LDO45_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00775;old_locus_tag=BDI4_10168 NZ_CAJZAS010000001.1 Protein Homology CDS 180704 181126 . + 0 ID=cds-WP_059525671.1;Parent=gene-LDO45_RS00775;Dbxref=GenBank:WP_059525671.1;Name=WP_059525671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547958.1;locus_tag=LDO45_RS00775;product=hypothetical protein;protein_id=WP_059525671.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 181202 181960 . + . ID=gene-LDO45_RS00780;Name=LDO45_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00780;old_locus_tag=BDI4_10169 NZ_CAJZAS010000001.1 Protein Homology CDS 181202 181960 . + 0 ID=cds-WP_223958828.1;Parent=gene-LDO45_RS00780;Dbxref=GenBank:WP_223958828.1;Name=WP_223958828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495084.1;locus_tag=LDO45_RS00780;product=hypothetical protein;protein_id=WP_223958828.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 182064 184859 . + . ID=gene-LDO45_RS00785;Name=pgaA;gbkey=Gene;gene=pgaA;gene_biotype=protein_coding;locus_tag=LDO45_RS00785;old_locus_tag=BDI4_10170 NZ_CAJZAS010000001.1 Protein Homology CDS 182064 184859 . + 0 ID=cds-WP_223958830.1;Parent=gene-LDO45_RS00785;Dbxref=GenBank:WP_223958830.1;Name=WP_223958830.1;Ontology_term=GO:1901515,GO:0009279;gbkey=CDS;gene=pgaA;go_component=cell outer membrane|0009279||IEA;go_function=poly-beta-1%2C6-N-acetyl-D-glucosamine transmembrane transporter activity|1901515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488687.1;locus_tag=LDO45_RS00785;product=poly-beta-1%2C6 N-acetyl-D-glucosamine export porin PgaA;protein_id=WP_223958830.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 184875 186968 . + . ID=gene-LDO45_RS00790;Name=pgaB;gbkey=Gene;gene=pgaB;gene_biotype=protein_coding;locus_tag=LDO45_RS00790;old_locus_tag=BDI4_10171 NZ_CAJZAS010000001.1 Protein Homology CDS 184875 186968 . + 0 ID=cds-WP_059524962.1;Parent=gene-LDO45_RS00790;Dbxref=GenBank:WP_059524962.1;Name=WP_059524962.1;Ontology_term=GO:0045226,GO:0019213;gbkey=CDS;gene=pgaB;go_function=deacetylase activity|0019213||IEA;go_process=extracellular polysaccharide biosynthetic process|0045226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753607.1;locus_tag=LDO45_RS00790;product=poly-beta-1%2C6-N-acetyl-D-glucosamine N-deacetylase PgaB;protein_id=WP_059524962.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 186965 188236 . + . ID=gene-LDO45_RS00795;Name=pgaC;gbkey=Gene;gene=pgaC;gene_biotype=protein_coding;locus_tag=LDO45_RS00795;old_locus_tag=BDI4_10172 NZ_CAJZAS010000001.1 Protein Homology CDS 186965 188236 . + 0 ID=cds-WP_223958845.1;Parent=gene-LDO45_RS00795;Dbxref=GenBank:WP_223958845.1;Name=WP_223958845.1;Ontology_term=GO:0042710,GO:0008375;gbkey=CDS;gene=pgaC;go_function=acetylglucosaminyltransferase activity|0008375||IEA;go_process=biofilm formation|0042710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217189.1;locus_tag=LDO45_RS00795;product=poly-beta-1%2C6-N-acetyl-D-glucosamine synthase;protein_id=WP_223958845.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 188214 188702 . + . ID=gene-LDO45_RS00800;Name=LDO45_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00800;old_locus_tag=BDI4_10173 NZ_CAJZAS010000001.1 Protein Homology CDS 188214 188702 . + 0 ID=cds-WP_059524958.1;Parent=gene-LDO45_RS00800;Dbxref=GenBank:WP_059524958.1;Name=WP_059524958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899671.1;locus_tag=LDO45_RS00800;product=hypothetical protein;protein_id=WP_059524958.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 188821 190644 . + . ID=gene-LDO45_RS00805;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LDO45_RS00805;old_locus_tag=BDI4_10174 NZ_CAJZAS010000001.1 Protein Homology CDS 188821 190644 . + 0 ID=cds-WP_223958847.1;Parent=gene-LDO45_RS00805;Dbxref=GenBank:WP_223958847.1;Name=WP_223958847.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759227.1;locus_tag=LDO45_RS00805;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_223958847.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 190644 191942 . + . ID=gene-LDO45_RS00810;Name=LDO45_RS00810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00810;old_locus_tag=BDI4_10175 NZ_CAJZAS010000001.1 Protein Homology CDS 190644 191942 . + 0 ID=cds-WP_223959005.1;Parent=gene-LDO45_RS00810;Dbxref=GenBank:WP_223959005.1;Name=WP_223959005.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759226.1;locus_tag=LDO45_RS00810;product=hypothetical protein;protein_id=WP_223959005.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 192109 192945 . + . ID=gene-LDO45_RS00815;Name=LDO45_RS00815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00815;old_locus_tag=BDI4_10176 NZ_CAJZAS010000001.1 Protein Homology CDS 192109 192945 . + 0 ID=cds-WP_223958849.1;Parent=gene-LDO45_RS00815;Dbxref=GenBank:WP_223958849.1;Name=WP_223958849.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658533.1;locus_tag=LDO45_RS00815;product=cytochrome c;protein_id=WP_223958849.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 192967 194223 . - . ID=gene-LDO45_RS00820;Name=LDO45_RS00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00820;old_locus_tag=BDI4_10177 NZ_CAJZAS010000001.1 Protein Homology CDS 192967 194223 . - 0 ID=cds-WP_223958851.1;Parent=gene-LDO45_RS00820;Dbxref=GenBank:WP_223958851.1;Name=WP_223958851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658532.1;locus_tag=LDO45_RS00820;product=Zn-dependent hydrolase;protein_id=WP_223958851.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 194216 194755 . - . ID=gene-LDO45_RS00825;Name=LDO45_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00825;old_locus_tag=BDI4_10178 NZ_CAJZAS010000001.1 Protein Homology CDS 194216 194755 . - 0 ID=cds-WP_059700578.1;Parent=gene-LDO45_RS00825;Dbxref=GenBank:WP_059700578.1;Name=WP_059700578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658531.1;locus_tag=LDO45_RS00825;product=L-2-amino-thiazoline-4-carboxylic acid hydrolase;protein_id=WP_059700578.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 194773 195939 . - . ID=gene-LDO45_RS00830;Name=LDO45_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00830;old_locus_tag=BDI4_10179 NZ_CAJZAS010000001.1 Protein Homology CDS 194773 195939 . - 0 ID=cds-WP_223958853.1;Parent=gene-LDO45_RS00830;Dbxref=GenBank:WP_223958853.1;Name=WP_223958853.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547969.1;locus_tag=LDO45_RS00830;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_223958853.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 196117 197010 . + . ID=gene-LDO45_RS00835;Name=LDO45_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00835;old_locus_tag=BDI4_10180 NZ_CAJZAS010000001.1 Protein Homology CDS 196117 197010 . + 0 ID=cds-WP_223958854.1;Parent=gene-LDO45_RS00835;Dbxref=GenBank:WP_223958854.1;Name=WP_223958854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899678.1;locus_tag=LDO45_RS00835;product=LysR substrate-binding domain-containing protein;protein_id=WP_223958854.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 197048 197749 . - . ID=gene-LDO45_RS00840;Name=LDO45_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00840;old_locus_tag=BDI4_10181 NZ_CAJZAS010000001.1 Protein Homology CDS 197048 197749 . - 0 ID=cds-WP_223958855.1;Parent=gene-LDO45_RS00840;Dbxref=GenBank:WP_223958855.1;Name=WP_223958855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658528.1;locus_tag=LDO45_RS00840;product=aspartate/glutamate racemase family protein;protein_id=WP_223958855.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 197765 199069 . - . ID=gene-LDO45_RS00845;Name=LDO45_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00845;old_locus_tag=BDI4_10182 NZ_CAJZAS010000001.1 Protein Homology CDS 197765 199069 . - 0 ID=cds-WP_223958857.1;Parent=gene-LDO45_RS00845;Dbxref=GenBank:WP_223958857.1;Name=WP_223958857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761356.1;locus_tag=LDO45_RS00845;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_223958857.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 199071 200027 . - . ID=gene-LDO45_RS00850;Name=LDO45_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00850;old_locus_tag=BDI4_10183 NZ_CAJZAS010000001.1 Protein Homology CDS 199071 200027 . - 0 ID=cds-WP_223958859.1;Parent=gene-LDO45_RS00850;Dbxref=GenBank:WP_223958859.1;Name=WP_223958859.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899684.1;locus_tag=LDO45_RS00850;product=ABC transporter substrate-binding protein;protein_id=WP_223958859.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 200349 200912 . + . ID=gene-LDO45_RS00855;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=LDO45_RS00855;old_locus_tag=BDI4_10184 NZ_CAJZAS010000001.1 Protein Homology CDS 200349 200912 . + 0 ID=cds-WP_006488685.1;Parent=gene-LDO45_RS00855;Dbxref=GenBank:WP_006488685.1;Name=WP_006488685.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329783.1;locus_tag=LDO45_RS00855;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_006488685.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 201038 202636 . + . ID=gene-LDO45_RS00860;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=LDO45_RS00860;old_locus_tag=BDI4_10185 NZ_CAJZAS010000001.1 Protein Homology CDS 201038 202636 . + 0 ID=cds-WP_223958860.1;Parent=gene-LDO45_RS00860;Dbxref=GenBank:WP_223958860.1;Name=WP_223958860.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403836.1;locus_tag=LDO45_RS00860;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_223958860.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 202751 203563 . - . ID=gene-LDO45_RS00865;Name=LDO45_RS00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00865;old_locus_tag=BDI4_10186 NZ_CAJZAS010000001.1 Protein Homology CDS 202751 203563 . - 0 ID=cds-WP_223958875.1;Parent=gene-LDO45_RS00865;Dbxref=GenBank:WP_223958875.1;Name=WP_223958875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365803.1;locus_tag=LDO45_RS00865;product=extensin;protein_id=WP_223958875.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 203893 204447 . - . ID=gene-LDO45_RS00870;Name=LDO45_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00870;old_locus_tag=BDI4_10188 NZ_CAJZAS010000001.1 Protein Homology CDS 203893 204447 . - 0 ID=cds-WP_059689864.1;Parent=gene-LDO45_RS00870;Dbxref=GenBank:WP_059689864.1;Name=WP_059689864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486233.1;locus_tag=LDO45_RS00870;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_059689864.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 204473 205807 . - . ID=gene-LDO45_RS00875;Name=LDO45_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00875;old_locus_tag=BDI4_10189 NZ_CAJZAS010000001.1 Protein Homology CDS 204473 205807 . - 0 ID=cds-WP_223958877.1;Parent=gene-LDO45_RS00875;Dbxref=GenBank:WP_223958877.1;Name=WP_223958877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355554.1;locus_tag=LDO45_RS00875;product=aspartate aminotransferase family protein;protein_id=WP_223958877.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 205823 206872 . - . ID=gene-LDO45_RS00880;Name=LDO45_RS00880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00880;old_locus_tag=BDI4_10190 NZ_CAJZAS010000001.1 Protein Homology CDS 205823 206872 . - 0 ID=cds-WP_223958879.1;Parent=gene-LDO45_RS00880;Dbxref=GenBank:WP_223958879.1;Name=WP_223958879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547979.1;locus_tag=LDO45_RS00880;product=C45 family peptidase;protein_id=WP_223958879.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 206893 207621 . - . ID=gene-LDO45_RS00885;Name=glnQ;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=LDO45_RS00885;old_locus_tag=BDI4_10191 NZ_CAJZAS010000001.1 Protein Homology CDS 206893 207621 . - 0 ID=cds-WP_059524930.1;Parent=gene-LDO45_RS00885;Dbxref=GenBank:WP_059524930.1;Name=WP_059524930.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424;gbkey=CDS;gene=glnQ;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538020.1;locus_tag=LDO45_RS00885;product=glutamine ABC transporter ATP-binding protein GlnQ;protein_id=WP_059524930.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 207618 208325 . - . ID=gene-LDO45_RS00890;Name=glnP;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=LDO45_RS00890;old_locus_tag=BDI4_10192 NZ_CAJZAS010000001.1 Protein Homology CDS 207618 208325 . - 0 ID=cds-WP_175912039.1;Parent=gene-LDO45_RS00890;Dbxref=GenBank:WP_175912039.1;Name=WP_175912039.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=glnP;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547981.1;locus_tag=LDO45_RS00890;product=glutamine ABC transporter permease GlnP;protein_id=WP_175912039.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 208341 209093 . - . ID=gene-LDO45_RS00895;Name=glnH;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=LDO45_RS00895;old_locus_tag=BDI4_10193 NZ_CAJZAS010000001.1 Protein Homology CDS 208341 209093 . - 0 ID=cds-WP_059700050.1;Parent=gene-LDO45_RS00895;Dbxref=GenBank:WP_059700050.1;Name=WP_059700050.1;Ontology_term=GO:1903803,GO:0015599,GO:0043190;gbkey=CDS;gene=glnH;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled L-glutamine transmembrane transporter activity|0015599||IEA;go_process=L-glutamine import across plasma membrane|1903803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010097614.1;locus_tag=LDO45_RS00895;product=glutamine ABC transporter substrate-binding protein GlnH;protein_id=WP_059700050.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 209483 213025 . - . ID=gene-LDO45_RS00900;Name=LDO45_RS00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00900;old_locus_tag=BDI4_10194 NZ_CAJZAS010000001.1 Protein Homology CDS 209483 213025 . - 0 ID=cds-WP_223958881.1;Parent=gene-LDO45_RS00900;Dbxref=GenBank:WP_223958881.1;Name=WP_223958881.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495094.1;locus_tag=LDO45_RS00900;product=ABC transporter ATP-binding protein;protein_id=WP_223958881.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 213146 214099 . + . ID=gene-LDO45_RS00905;Name=LDO45_RS00905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00905;old_locus_tag=BDI4_10195 NZ_CAJZAS010000001.1 Protein Homology CDS 213146 214099 . + 0 ID=cds-WP_059700047.1;Parent=gene-LDO45_RS00905;Dbxref=GenBank:WP_059700047.1;Name=WP_059700047.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486231.1;locus_tag=LDO45_RS00905;product=LysR family transcriptional regulator;protein_id=WP_059700047.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 214148 214519 . - . ID=gene-LDO45_RS00910;Name=LDO45_RS00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00910;old_locus_tag=BDI4_10196 NZ_CAJZAS010000001.1 Protein Homology CDS 214148 214519 . - 0 ID=cds-WP_059524922.1;Parent=gene-LDO45_RS00910;Dbxref=GenBank:WP_059524922.1;Name=WP_059524922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495095.1;locus_tag=LDO45_RS00910;product=MAPEG family protein;protein_id=WP_059524922.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 214823 215944 . + . ID=gene-LDO45_RS00915;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=LDO45_RS00915;old_locus_tag=BDI4_10197 NZ_CAJZAS010000001.1 Protein Homology CDS 214823 215944 . + 0 ID=cds-WP_223958891.1;Parent=gene-LDO45_RS00915;Dbxref=GenBank:WP_223958891.1;Name=WP_223958891.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899697.1;locus_tag=LDO45_RS00915;product=alanine racemase;protein_id=WP_223958891.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 216008 216802 . - . ID=gene-LDO45_RS00920;Name=LDO45_RS00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00920;old_locus_tag=BDI4_10198 NZ_CAJZAS010000001.1 Protein Homology CDS 216008 216802 . - 0 ID=cds-WP_223958893.1;Parent=gene-LDO45_RS00920;Dbxref=GenBank:WP_223958893.1;Name=WP_223958893.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355563.1;locus_tag=LDO45_RS00920;product=enoyl-CoA hydratase;protein_id=WP_223958893.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 217048 217413 . - . ID=gene-LDO45_RS00925;Name=LDO45_RS00925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00925;old_locus_tag=BDI4_10199 NZ_CAJZAS010000001.1 Protein Homology CDS 217048 217413 . - 0 ID=cds-WP_006765703.1;Parent=gene-LDO45_RS00925;Dbxref=GenBank:WP_006765703.1;Name=WP_006765703.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759394.1;locus_tag=LDO45_RS00925;product=response regulator;protein_id=WP_006765703.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 217450 218409 . - . ID=gene-LDO45_RS00930;Name=LDO45_RS00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00930;old_locus_tag=BDI4_10200 NZ_CAJZAS010000001.1 Protein Homology CDS 217450 218409 . - 0 ID=cds-WP_059524919.1;Parent=gene-LDO45_RS00930;Dbxref=GenBank:WP_059524919.1;Name=WP_059524919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495102.1;locus_tag=LDO45_RS00930;product=chemotaxis protein CheX;protein_id=WP_059524919.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 218436 219020 . - . ID=gene-LDO45_RS00935;Name=LDO45_RS00935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00935;old_locus_tag=BDI4_10201 NZ_CAJZAS010000001.1 Protein Homology CDS 218436 219020 . - 0 ID=cds-WP_223958895.1;Parent=gene-LDO45_RS00935;Dbxref=GenBank:WP_223958895.1;Name=WP_223958895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495103.1;locus_tag=LDO45_RS00935;product=hypothetical protein;protein_id=WP_223958895.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 219017 219757 . - . ID=gene-LDO45_RS00940;Name=LDO45_RS00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00940;old_locus_tag=BDI4_10202 NZ_CAJZAS010000001.1 Protein Homology CDS 219017 219757 . - 0 ID=cds-WP_223958897.1;Parent=gene-LDO45_RS00940;Dbxref=GenBank:WP_223958897.1;Name=WP_223958897.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658488.1;locus_tag=LDO45_RS00940;product=methyl-accepting chemotaxis protein;protein_id=WP_223958897.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 219760 222150 . - . ID=gene-LDO45_RS00945;Name=LDO45_RS00945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00945;old_locus_tag=BDI4_10203 NZ_CAJZAS010000001.1 Protein Homology CDS 219760 222150 . - 0 ID=cds-WP_223958911.1;Parent=gene-LDO45_RS00945;Dbxref=GenBank:WP_223958911.1;Name=WP_223958911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750135.1;locus_tag=LDO45_RS00945;product=ATP-binding protein;protein_id=WP_223958911.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 222247 222642 . + . ID=gene-LDO45_RS00950;Name=LDO45_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00950;old_locus_tag=BDI4_10204 NZ_CAJZAS010000001.1 GeneMarkS-2+ CDS 222247 222642 . + 0 ID=cds-WP_223958918.1;Parent=gene-LDO45_RS00950;Dbxref=GenBank:WP_223958918.1;Name=WP_223958918.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS00950;product=hypothetical protein;protein_id=WP_223958918.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 222639 223328 . + . ID=gene-LDO45_RS00955;Name=LDO45_RS00955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00955;old_locus_tag=BDI4_10206 NZ_CAJZAS010000001.1 Protein Homology CDS 222639 223328 . + 0 ID=cds-WP_223958932.1;Parent=gene-LDO45_RS00955;Dbxref=GenBank:WP_223958932.1;Name=WP_223958932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495107.1;locus_tag=LDO45_RS00955;product=alpha/beta hydrolase;protein_id=WP_223958932.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 223362 224861 . - . ID=gene-LDO45_RS00960;Name=LDO45_RS00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00960;old_locus_tag=BDI4_10207 NZ_CAJZAS010000001.1 Protein Homology CDS 223362 224861 . - 0 ID=cds-WP_059524912.1;Parent=gene-LDO45_RS00960;Dbxref=GenBank:WP_059524912.1;Name=WP_059524912.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658483.1;locus_tag=LDO45_RS00960;product=amino acid permease;protein_id=WP_059524912.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 224965 226371 . - . ID=gene-LDO45_RS00965;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=LDO45_RS00965;old_locus_tag=BDI4_10208 NZ_CAJZAS010000001.1 Protein Homology CDS 224965 226371 . - 0 ID=cds-WP_223958941.1;Parent=gene-LDO45_RS00965;Dbxref=GenBank:WP_223958941.1;Name=WP_223958941.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750132.1;locus_tag=LDO45_RS00965;product=aspartate ammonia-lyase;protein_id=WP_223958941.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 226526 227500 . + . ID=gene-LDO45_RS00970;Name=LDO45_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00970;old_locus_tag=BDI4_10209 NZ_CAJZAS010000001.1 Protein Homology CDS 226526 227500 . + 0 ID=cds-WP_223958943.1;Parent=gene-LDO45_RS00970;Dbxref=GenBank:WP_223958943.1;Name=WP_223958943.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338402.1;locus_tag=LDO45_RS00970;product=LysR family transcriptional regulator;protein_id=WP_223958943.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 227582 228646 . - . ID=gene-LDO45_RS00975;Name=LDO45_RS00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00975;old_locus_tag=BDI4_10210 NZ_CAJZAS010000001.1 Protein Homology CDS 227582 228646 . - 0 ID=cds-WP_223958945.1;Parent=gene-LDO45_RS00975;Dbxref=GenBank:WP_223958945.1;Name=WP_223958945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759441.1;locus_tag=LDO45_RS00975;product=asparaginase;protein_id=WP_223958945.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 228905 229927 . - . ID=gene-LDO45_RS00980;Name=LDO45_RS00980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00980;old_locus_tag=BDI4_10212 NZ_CAJZAS010000001.1 Protein Homology CDS 228905 229927 . - 0 ID=cds-WP_223958954.1;Parent=gene-LDO45_RS00980;Dbxref=GenBank:WP_223958954.1;Name=WP_223958954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491312.1;locus_tag=LDO45_RS00980;product=DUF2891 domain-containing protein;protein_id=WP_223958954.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 229938 230888 . - . ID=gene-LDO45_RS00985;Name=LDO45_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00985;old_locus_tag=BDI4_10213 NZ_CAJZAS010000001.1 Protein Homology CDS 229938 230888 . - 0 ID=cds-WP_223958956.1;Parent=gene-LDO45_RS00985;Dbxref=GenBank:WP_223958956.1;Name=WP_223958956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399760.1;locus_tag=LDO45_RS00985;product=DUF979 domain-containing protein;protein_id=WP_223958956.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 230885 231574 . - . ID=gene-LDO45_RS00990;Name=LDO45_RS00990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00990;old_locus_tag=BDI4_10214 NZ_CAJZAS010000001.1 Protein Homology CDS 230885 231574 . - 0 ID=cds-WP_223958965.1;Parent=gene-LDO45_RS00990;Dbxref=GenBank:WP_223958965.1;Name=WP_223958965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658477.1;locus_tag=LDO45_RS00990;product=DUF969 domain-containing protein;protein_id=WP_223958965.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 231907 232131 . + . ID=gene-LDO45_RS00995;Name=LDO45_RS00995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS00995;old_locus_tag=BDI4_10215 NZ_CAJZAS010000001.1 Protein Homology CDS 231907 232131 . + 0 ID=cds-WP_039357299.1;Parent=gene-LDO45_RS00995;Dbxref=GenBank:WP_039357299.1;Name=WP_039357299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759437.1;locus_tag=LDO45_RS00995;product=hypothetical protein;protein_id=WP_039357299.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 232265 232528 . + . ID=gene-LDO45_RS01000;Name=LDO45_RS01000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01000 NZ_CAJZAS010000001.1 GeneMarkS-2+ CDS 232265 232528 . + 0 ID=cds-WP_223958967.1;Parent=gene-LDO45_RS01000;Dbxref=GenBank:WP_223958967.1;Name=WP_223958967.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS01000;product=hypothetical protein;protein_id=WP_223958967.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 232525 233529 . + . ID=gene-LDO45_RS01005;Name=LDO45_RS01005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01005;old_locus_tag=BDI4_10217 NZ_CAJZAS010000001.1 Protein Homology CDS 232525 233529 . + 0 ID=cds-WP_059524898.1;Parent=gene-LDO45_RS01005;Dbxref=GenBank:WP_059524898.1;Name=WP_059524898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365781.1;locus_tag=LDO45_RS01005;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=WP_059524898.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 233585 234694 . + . ID=gene-LDO45_RS01010;Name=LDO45_RS01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01010;old_locus_tag=BDI4_10218 NZ_CAJZAS010000001.1 Protein Homology CDS 233585 234694 . + 0 ID=cds-WP_290370981.1;Parent=gene-LDO45_RS01010;Dbxref=GenBank:WP_290370981.1;Name=WP_290370981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365780.1;locus_tag=LDO45_RS01010;product=diguanylate cyclase domain-containing protein;protein_id=WP_290370981.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 234699 236951 . - . ID=gene-LDO45_RS01015;Name=LDO45_RS01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01015;old_locus_tag=BDI4_10219 NZ_CAJZAS010000001.1 Protein Homology CDS 234699 236951 . - 0 ID=cds-WP_223958969.1;Parent=gene-LDO45_RS01015;Dbxref=GenBank:WP_223958969.1;Name=WP_223958969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365779.1;locus_tag=LDO45_RS01015;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_223958969.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 237406 238128 . + . ID=gene-LDO45_RS01020;Name=LDO45_RS01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01020;old_locus_tag=BDI4_10220 NZ_CAJZAS010000001.1 Protein Homology CDS 237406 238128 . + 0 ID=cds-WP_223958983.1;Parent=gene-LDO45_RS01020;Dbxref=GenBank:WP_223958983.1;Name=WP_223958983.1;Ontology_term=GO:0019120;gbkey=CDS;go_function=hydrolase activity%2C acting on acid halide bonds%2C in C-halide compounds|0019120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754371.1;locus_tag=LDO45_RS01020;product=haloacid dehalogenase type II;protein_id=WP_223958983.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 238252 239205 . - . ID=gene-LDO45_RS01025;Name=LDO45_RS01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01025;old_locus_tag=BDI4_10222 NZ_CAJZAS010000001.1 Protein Homology CDS 238252 239205 . - 0 ID=cds-WP_059524887.1;Parent=gene-LDO45_RS01025;Dbxref=GenBank:WP_059524887.1;Name=WP_059524887.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467878.1;locus_tag=LDO45_RS01025;product=LysR family transcriptional regulator;protein_id=WP_059524887.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 239362 240681 . + . ID=gene-LDO45_RS01030;Name=LDO45_RS01030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01030;old_locus_tag=BDI4_10223 NZ_CAJZAS010000001.1 Protein Homology CDS 239362 240681 . + 0 ID=cds-WP_223958985.1;Parent=gene-LDO45_RS01030;Dbxref=GenBank:WP_223958985.1;Name=WP_223958985.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479247.1;locus_tag=LDO45_RS01030;product=MFS transporter;protein_id=WP_223958985.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 240804 242330 . + . ID=gene-LDO45_RS01035;Name=LDO45_RS01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01035;old_locus_tag=BDI4_10224 NZ_CAJZAS010000001.1 Protein Homology CDS 240804 242330 . + 0 ID=cds-WP_223958987.1;Parent=gene-LDO45_RS01035;Dbxref=GenBank:WP_223958987.1;Name=WP_223958987.1;Ontology_term=GO:0018478;gbkey=CDS;go_function=malonate-semialdehyde dehydrogenase (acetylating) activity|0018478||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658468.1;locus_tag=LDO45_RS01035;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_223958987.1;transl_table=11 NZ_CAJZAS010000001.1 RefSeq gene 242344 242724 . + . ID=gene-LDO45_RS01040;Name=LDO45_RS01040;end_range=242724,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01040;partial=true NZ_CAJZAS010000001.1 Protein Homology CDS 242344 242724 . + 0 ID=cds-WP_223958995.1;Parent=gene-LDO45_RS01040;Dbxref=GenBank:WP_223958995.1;Name=WP_223958995.1;Ontology_term=GO:0050661;end_range=242724,.;gbkey=CDS;go_function=NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899744.1;locus_tag=LDO45_RS01040;partial=true;product=NAD(P)-binding domain-containing protein;protein_id=WP_223958995.1;transl_table=11 ##sequence-region NZ_CAJZAS010000002.1 1 65108 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000002.1 RefSeq region 1 65108 . + . ID=NZ_CAJZAS010000002.1:1..65108;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_10 NZ_CAJZAS010000002.1 RefSeq pseudogene 181 557 . + . ID=gene-LDO45_RS01045;Name=LDO45_RS01045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS01045;old_locus_tag=BDI4_100001;pseudo=true NZ_CAJZAS010000002.1 Protein Homology CDS 181 557 . + 0 ID=cds-LDO45_RS01045;Parent=gene-LDO45_RS01045;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759295.1;locus_tag=LDO45_RS01045;product=response regulator transcription factor;pseudo=true;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 575 1354 . + . ID=gene-LDO45_RS01050;Name=LDO45_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01050;old_locus_tag=BDI4_100002 NZ_CAJZAS010000002.1 Protein Homology CDS 575 1354 . + 0 ID=cds-WP_059525375.1;Parent=gene-LDO45_RS01050;Dbxref=GenBank:WP_059525375.1;Name=WP_059525375.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765894.1;locus_tag=LDO45_RS01050;product=helix-turn-helix domain-containing protein;protein_id=WP_059525375.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 1373 1726 . - . ID=gene-LDO45_RS01055;Name=LDO45_RS01055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01055;old_locus_tag=BDI4_100003 NZ_CAJZAS010000002.1 Protein Homology CDS 1373 1726 . - 0 ID=cds-WP_059525373.1;Parent=gene-LDO45_RS01055;Dbxref=GenBank:WP_059525373.1;Name=WP_059525373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752670.1;locus_tag=LDO45_RS01055;product=hypothetical protein;protein_id=WP_059525373.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 1897 2136 . - . ID=gene-LDO45_RS01060;Name=LDO45_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01060;old_locus_tag=BDI4_100004 NZ_CAJZAS010000002.1 Protein Homology CDS 1897 2136 . - 0 ID=cds-WP_059525371.1;Parent=gene-LDO45_RS01060;Dbxref=GenBank:WP_059525371.1;Name=WP_059525371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479066.1;locus_tag=LDO45_RS01060;product=hypothetical protein;protein_id=WP_059525371.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 2153 2443 . - . ID=gene-LDO45_RS01065;Name=LDO45_RS01065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01065;old_locus_tag=BDI4_100005 NZ_CAJZAS010000002.1 Protein Homology CDS 2153 2443 . - 0 ID=cds-WP_059525369.1;Parent=gene-LDO45_RS01065;Dbxref=GenBank:WP_059525369.1;Name=WP_059525369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481711.1;locus_tag=LDO45_RS01065;product=DUF1488 domain-containing protein;protein_id=WP_059525369.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 2559 2957 . - . ID=gene-LDO45_RS01070;Name=LDO45_RS01070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01070;old_locus_tag=BDI4_100006 NZ_CAJZAS010000002.1 Protein Homology CDS 2559 2957 . - 0 ID=cds-WP_059525367.1;Parent=gene-LDO45_RS01070;Dbxref=GenBank:WP_059525367.1;Name=WP_059525367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899438.1;locus_tag=LDO45_RS01070;product=DUF488 domain-containing protein;protein_id=WP_059525367.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 3088 4290 . - . ID=gene-LDO45_RS01075;Name=LDO45_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01075;old_locus_tag=BDI4_100007 NZ_CAJZAS010000002.1 Protein Homology CDS 3088 4290 . - 0 ID=cds-WP_059819044.1;Parent=gene-LDO45_RS01075;Dbxref=GenBank:WP_059819044.1;Name=WP_059819044.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752666.1;locus_tag=LDO45_RS01075;product=amino acid aminotransferase;protein_id=WP_059819044.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 4334 5719 . - . ID=gene-LDO45_RS01080;Name=LDO45_RS01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01080;old_locus_tag=BDI4_100008 NZ_CAJZAS010000002.1 Protein Homology CDS 4334 5719 . - 0 ID=cds-WP_059525363.1;Parent=gene-LDO45_RS01080;Dbxref=GenBank:WP_059525363.1;Name=WP_059525363.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329535.1;locus_tag=LDO45_RS01080;product=amino acid permease;protein_id=WP_059525363.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 6040 6513 . + . ID=gene-LDO45_RS01085;Name=LDO45_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01085;old_locus_tag=BDI4_100010 NZ_CAJZAS010000002.1 Protein Homology CDS 6040 6513 . + 0 ID=cds-WP_006479071.1;Parent=gene-LDO45_RS01085;Dbxref=GenBank:WP_006479071.1;Name=WP_006479071.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329536.1;locus_tag=LDO45_RS01085;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_006479071.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 6562 7473 . - . ID=gene-LDO45_RS01090;Name=LDO45_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01090;old_locus_tag=BDI4_100011 NZ_CAJZAS010000002.1 Protein Homology CDS 6562 7473 . - 0 ID=cds-WP_059700336.1;Parent=gene-LDO45_RS01090;Dbxref=GenBank:WP_059700336.1;Name=WP_059700336.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355275.1;locus_tag=LDO45_RS01090;product=EamA family transporter;protein_id=WP_059700336.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 7821 9494 . + . ID=gene-LDO45_RS01095;Name=LDO45_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01095;old_locus_tag=BDI4_100013 NZ_CAJZAS010000002.1 Protein Homology CDS 7821 9494 . + 0 ID=cds-WP_223959023.1;Parent=gene-LDO45_RS01095;Dbxref=GenBank:WP_223959023.1;Name=WP_223959023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184686.1;locus_tag=LDO45_RS01095;product=phospholipase C;protein_id=WP_223959023.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 9596 11014 . + . ID=gene-LDO45_RS01100;Name=LDO45_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01100;old_locus_tag=BDI4_100014 NZ_CAJZAS010000002.1 Protein Homology CDS 9596 11014 . + 0 ID=cds-WP_223959031.1;Parent=gene-LDO45_RS01100;Dbxref=GenBank:WP_223959031.1;Name=WP_223959031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752659.1;locus_tag=LDO45_RS01100;product=cytochrome-c peroxidase;protein_id=WP_223959031.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq pseudogene 11039 11209 . - . ID=gene-LDO45_RS01105;Name=LDO45_RS01105;end_range=11209,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS01105;partial=true;pseudo=true NZ_CAJZAS010000002.1 Protein Homology CDS 11039 11209 . - 0 ID=cds-LDO45_RS01105;Parent=gene-LDO45_RS01105;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=11209,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415238.1;locus_tag=LDO45_RS01105;partial=true;product=SAM-dependent methyltransferase;pseudo=true;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 11266 12600 . - . ID=gene-LDO45_RS01110;Name=LDO45_RS01110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01110;old_locus_tag=BDI4_100016 NZ_CAJZAS010000002.1 Protein Homology CDS 11266 12600 . - 0 ID=cds-WP_223959033.1;Parent=gene-LDO45_RS01110;Dbxref=GenBank:WP_223959033.1;Name=WP_223959033.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547759.1;locus_tag=LDO45_RS01110;product=chloride channel protein;protein_id=WP_223959033.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 12780 14021 . - . ID=gene-LDO45_RS01115;Name=codA;gbkey=Gene;gene=codA;gene_biotype=protein_coding;locus_tag=LDO45_RS01115;old_locus_tag=BDI4_100017 NZ_CAJZAS010000002.1 Protein Homology CDS 12780 14021 . - 0 ID=cds-WP_223959035.1;Parent=gene-LDO45_RS01115;Dbxref=GenBank:WP_223959035.1;Name=WP_223959035.1;Ontology_term=GO:0016810;gbkey=CDS;gene=codA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547760.1;locus_tag=LDO45_RS01115;product=cytosine deaminase;protein_id=WP_223959035.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 14095 14559 . - . ID=gene-LDO45_RS01120;Name=LDO45_RS01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01120;old_locus_tag=BDI4_100018 NZ_CAJZAS010000002.1 Protein Homology CDS 14095 14559 . - 0 ID=cds-WP_223959037.1;Parent=gene-LDO45_RS01120;Dbxref=GenBank:WP_223959037.1;Name=WP_223959037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403597.1;locus_tag=LDO45_RS01120;product=VOC family protein;protein_id=WP_223959037.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 14869 16011 . + . ID=gene-LDO45_RS01125;Name=LDO45_RS01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01125;old_locus_tag=BDI4_100019 NZ_CAJZAS010000002.1 Protein Homology CDS 14869 16011 . + 0 ID=cds-WP_059690030.1;Parent=gene-LDO45_RS01125;Dbxref=GenBank:WP_059690030.1;Name=WP_059690030.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338211.1;locus_tag=LDO45_RS01125;product=porin;protein_id=WP_059690030.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 16235 16537 . + . ID=gene-LDO45_RS01130;Name=LDO45_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01130;old_locus_tag=BDI4_100020 NZ_CAJZAS010000002.1 Protein Homology CDS 16235 16537 . + 0 ID=cds-WP_059525344.1;Parent=gene-LDO45_RS01130;Dbxref=GenBank:WP_059525344.1;Name=WP_059525344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755817.1;locus_tag=LDO45_RS01130;product=DUF4148 domain-containing protein;protein_id=WP_059525344.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 16691 17638 . - . ID=gene-LDO45_RS01135;Name=LDO45_RS01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01135;old_locus_tag=BDI4_100021 NZ_CAJZAS010000002.1 Protein Homology CDS 16691 17638 . - 0 ID=cds-WP_059700316.1;Parent=gene-LDO45_RS01135;Dbxref=GenBank:WP_059700316.1;Name=WP_059700316.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658752.1;locus_tag=LDO45_RS01135;product=LysR family transcriptional regulator;protein_id=WP_059700316.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 17830 20013 . + . ID=gene-LDO45_RS01140;Name=LDO45_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01140;old_locus_tag=BDI4_100022 NZ_CAJZAS010000002.1 Protein Homology CDS 17830 20013 . + 0 ID=cds-WP_223959040.1;Parent=gene-LDO45_RS01140;Dbxref=GenBank:WP_223959040.1;Name=WP_223959040.1;Ontology_term=GO:0006810,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338214.1;locus_tag=LDO45_RS01140;product=FUSC family protein;protein_id=WP_223959040.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 20171 20383 . + . ID=gene-LDO45_RS01145;Name=LDO45_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01145;old_locus_tag=BDI4_100024 NZ_CAJZAS010000002.1 Protein Homology CDS 20171 20383 . + 0 ID=cds-WP_059525339.1;Parent=gene-LDO45_RS01145;Dbxref=GenBank:WP_059525339.1;Name=WP_059525339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754376.1;locus_tag=LDO45_RS01145;product=hypothetical protein;protein_id=WP_059525339.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 20513 21622 . - . ID=gene-LDO45_RS01150;Name=LDO45_RS01150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01150;old_locus_tag=BDI4_100025 NZ_CAJZAS010000002.1 Protein Homology CDS 20513 21622 . - 0 ID=cds-WP_223959042.1;Parent=gene-LDO45_RS01150;Dbxref=GenBank:WP_223959042.1;Name=WP_223959042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217027.1;locus_tag=LDO45_RS01150;product=P1 family peptidase;protein_id=WP_223959042.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 21666 23072 . - . ID=gene-LDO45_RS01155;Name=LDO45_RS01155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01155;old_locus_tag=BDI4_100027 NZ_CAJZAS010000002.1 Protein Homology CDS 21666 23072 . - 0 ID=cds-WP_223959044.1;Parent=gene-LDO45_RS01155;Dbxref=GenBank:WP_223959044.1;Name=WP_223959044.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482833.1;locus_tag=LDO45_RS01155;product=APC family permease;protein_id=WP_223959044.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 23205 24005 . + . ID=gene-LDO45_RS01160;Name=LDO45_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01160;old_locus_tag=BDI4_100026 NZ_CAJZAS010000002.1 Protein Homology CDS 23205 24005 . + 0 ID=cds-WP_059467907.1;Parent=gene-LDO45_RS01160;Dbxref=GenBank:WP_059467907.1;Name=WP_059467907.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482848.1;locus_tag=LDO45_RS01160;product=helix-turn-helix transcriptional regulator;protein_id=WP_059467907.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 24022 25461 . - . ID=gene-LDO45_RS01165;Name=LDO45_RS01165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01165;old_locus_tag=BDI4_100029 NZ_CAJZAS010000002.1 Protein Homology CDS 24022 25461 . - 0 ID=cds-WP_223959046.1;Parent=gene-LDO45_RS01165;Dbxref=GenBank:WP_223959046.1;Name=WP_223959046.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013802522.1;locus_tag=LDO45_RS01165;product=cytochrome P450;protein_id=WP_223959046.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 25549 26487 . + . ID=gene-LDO45_RS01170;Name=LDO45_RS01170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01170;old_locus_tag=BDI4_100028 NZ_CAJZAS010000002.1 Protein Homology CDS 25549 26487 . + 0 ID=cds-WP_059525331.1;Parent=gene-LDO45_RS01170;Dbxref=GenBank:WP_059525331.1;Name=WP_059525331.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899461.1;locus_tag=LDO45_RS01170;product=helix-turn-helix domain-containing protein;protein_id=WP_059525331.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 26509 26886 . - . ID=gene-LDO45_RS01175;Name=LDO45_RS01175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01175;old_locus_tag=BDI4_100030 NZ_CAJZAS010000002.1 Protein Homology CDS 26509 26886 . - 0 ID=cds-WP_059525329.1;Parent=gene-LDO45_RS01175;Dbxref=GenBank:WP_059525329.1;Name=WP_059525329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482852.1;locus_tag=LDO45_RS01175;product=nuclear transport factor 2 family protein;protein_id=WP_059525329.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 27266 28150 . + . ID=gene-LDO45_RS01180;Name=LDO45_RS01180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01180;old_locus_tag=BDI4_100031 NZ_CAJZAS010000002.1 Protein Homology CDS 27266 28150 . + 0 ID=cds-WP_059525325.1;Parent=gene-LDO45_RS01180;Dbxref=GenBank:WP_059525325.1;Name=WP_059525325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329558.1;locus_tag=LDO45_RS01180;product=LysR substrate-binding domain-containing protein;protein_id=WP_059525325.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 28315 29247 . + . ID=gene-LDO45_RS01185;Name=LDO45_RS01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01185;old_locus_tag=BDI4_100032 NZ_CAJZAS010000002.1 Protein Homology CDS 28315 29247 . + 0 ID=cds-WP_223959048.1;Parent=gene-LDO45_RS01185;Dbxref=GenBank:WP_223959048.1;Name=WP_223959048.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899464.1;locus_tag=LDO45_RS01185;product=AEC family transporter;protein_id=WP_223959048.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 29589 29963 . + . ID=gene-LDO45_RS01190;Name=LDO45_RS01190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01190;old_locus_tag=BDI4_100033 NZ_CAJZAS010000002.1 Protein Homology CDS 29589 29963 . + 0 ID=cds-WP_059468071.1;Parent=gene-LDO45_RS01190;Dbxref=GenBank:WP_059468071.1;Name=WP_059468071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479101.1;locus_tag=LDO45_RS01190;product=hypothetical protein;protein_id=WP_059468071.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 30096 31613 . - . ID=gene-LDO45_RS01195;Name=LDO45_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01195;old_locus_tag=BDI4_100034 NZ_CAJZAS010000002.1 Protein Homology CDS 30096 31613 . - 0 ID=cds-WP_223959050.1;Parent=gene-LDO45_RS01195;Dbxref=GenBank:WP_223959050.1;Name=WP_223959050.1;Ontology_term=GO:0018478;gbkey=CDS;go_function=malonate-semialdehyde dehydrogenase (acetylating) activity|0018478||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366001.1;locus_tag=LDO45_RS01195;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_223959050.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 31664 33022 . - . ID=gene-LDO45_RS01200;Name=LDO45_RS01200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01200;old_locus_tag=BDI4_100036 NZ_CAJZAS010000002.1 Protein Homology CDS 31664 33022 . - 0 ID=cds-WP_223959064.1;Parent=gene-LDO45_RS01200;Dbxref=GenBank:WP_223959064.1;Name=WP_223959064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329565.1;locus_tag=LDO45_RS01200;product=aspartate aminotransferase family protein;protein_id=WP_223959064.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 33128 34093 . + . ID=gene-LDO45_RS01205;Name=LDO45_RS01205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01205;old_locus_tag=BDI4_100035 NZ_CAJZAS010000002.1 Protein Homology CDS 33128 34093 . + 0 ID=cds-WP_059690021.1;Parent=gene-LDO45_RS01205;Dbxref=GenBank:WP_059690021.1;Name=WP_059690021.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899469.1;locus_tag=LDO45_RS01205;product=LysR family transcriptional regulator;protein_id=WP_059690021.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 34193 34684 . + . ID=gene-LDO45_RS01210;Name=LDO45_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01210;old_locus_tag=BDI4_100037 NZ_CAJZAS010000002.1 Protein Homology CDS 34193 34684 . + 0 ID=cds-WP_223959066.1;Parent=gene-LDO45_RS01210;Dbxref=GenBank:WP_223959066.1;Name=WP_223959066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547776.1;locus_tag=LDO45_RS01210;product=2%2C4'-dihydroxyacetophenone dioxygenase family protein;protein_id=WP_223959066.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 34790 35938 . - . ID=gene-LDO45_RS01215;Name=LDO45_RS01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01215;old_locus_tag=BDI4_100038 NZ_CAJZAS010000002.1 Protein Homology CDS 34790 35938 . - 0 ID=cds-WP_223959068.1;Parent=gene-LDO45_RS01215;Dbxref=GenBank:WP_223959068.1;Name=WP_223959068.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479109.1;locus_tag=LDO45_RS01215;product=epoxide hydrolase family protein;protein_id=WP_223959068.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 36013 36972 . - . ID=gene-LDO45_RS01220;Name=LDO45_RS01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01220;old_locus_tag=BDI4_100039 NZ_CAJZAS010000002.1 Protein Homology CDS 36013 36972 . - 0 ID=cds-WP_223959070.1;Parent=gene-LDO45_RS01220;Dbxref=GenBank:WP_223959070.1;Name=WP_223959070.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338225.1;locus_tag=LDO45_RS01220;product=GlxA family transcriptional regulator;protein_id=WP_223959070.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 37113 37913 . + . ID=gene-LDO45_RS01225;Name=LDO45_RS01225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01225;old_locus_tag=BDI4_100040 NZ_CAJZAS010000002.1 Protein Homology CDS 37113 37913 . + 0 ID=cds-WP_223959073.1;Parent=gene-LDO45_RS01225;Dbxref=GenBank:WP_223959073.1;Name=WP_223959073.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762186.1;locus_tag=LDO45_RS01225;product=SDR family oxidoreductase;protein_id=WP_223959073.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 38310 39419 . - . ID=gene-LDO45_RS01230;Name=LDO45_RS01230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01230;old_locus_tag=BDI4_100042 NZ_CAJZAS010000002.1 Protein Homology CDS 38310 39419 . - 0 ID=cds-WP_223959081.1;Parent=gene-LDO45_RS01230;Dbxref=GenBank:WP_223959081.1;Name=WP_223959081.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762187.1;locus_tag=LDO45_RS01230;product=MFS transporter;protein_id=WP_223959081.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 39450 41138 . + . ID=gene-LDO45_RS01235;Name=LDO45_RS01235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01235;old_locus_tag=BDI4_100041 NZ_CAJZAS010000002.1 Protein Homology CDS 39450 41138 . + 0 ID=cds-WP_223959083.1;Parent=gene-LDO45_RS01235;Dbxref=GenBank:WP_223959083.1;Name=WP_223959083.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF012464.5;locus_tag=LDO45_RS01235;product=recombinase family protein;protein_id=WP_223959083.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 41142 41423 . - . ID=gene-LDO45_RS01240;Name=LDO45_RS01240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01240;old_locus_tag=BDI4_100043 NZ_CAJZAS010000002.1 GeneMarkS-2+ CDS 41142 41423 . - 0 ID=cds-WP_223959085.1;Parent=gene-LDO45_RS01240;Dbxref=GenBank:WP_223959085.1;Name=WP_223959085.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS01240;product=hypothetical protein;protein_id=WP_223959085.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 41702 41956 . - . ID=gene-LDO45_RS01245;Name=LDO45_RS01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01245;old_locus_tag=BDI4_100045 NZ_CAJZAS010000002.1 GeneMarkS-2+ CDS 41702 41956 . - 0 ID=cds-WP_223959087.1;Parent=gene-LDO45_RS01245;Dbxref=GenBank:WP_223959087.1;Name=WP_223959087.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS01245;product=hypothetical protein;protein_id=WP_223959087.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 41960 42985 . - . ID=gene-LDO45_RS01250;Name=LDO45_RS01250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01250;old_locus_tag=BDI4_100046 NZ_CAJZAS010000002.1 GeneMarkS-2+ CDS 41960 42985 . - 0 ID=cds-WP_223959089.1;Parent=gene-LDO45_RS01250;Dbxref=GenBank:WP_223959089.1;Name=WP_223959089.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS01250;product=hypothetical protein;protein_id=WP_223959089.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 43747 44652 . + . ID=gene-LDO45_RS01255;Name=LDO45_RS01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01255;old_locus_tag=BDI4_100048 NZ_CAJZAS010000002.1 GeneMarkS-2+ CDS 43747 44652 . + 0 ID=cds-WP_223959091.1;Parent=gene-LDO45_RS01255;Dbxref=GenBank:WP_223959091.1;Name=WP_223959091.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS01255;product=hypothetical protein;protein_id=WP_223959091.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 44662 45447 . + . ID=gene-LDO45_RS01260;Name=LDO45_RS01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01260;old_locus_tag=BDI4_100049 NZ_CAJZAS010000002.1 GeneMarkS-2+ CDS 44662 45447 . + 0 ID=cds-WP_223959093.1;Parent=gene-LDO45_RS01260;Dbxref=GenBank:WP_223959093.1;Name=WP_223959093.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS01260;product=hypothetical protein;protein_id=WP_223959093.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 45428 45730 . + . ID=gene-LDO45_RS01265;Name=LDO45_RS01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01265;old_locus_tag=BDI4_100050 NZ_CAJZAS010000002.1 GeneMarkS-2+ CDS 45428 45730 . + 0 ID=cds-WP_223959095.1;Parent=gene-LDO45_RS01265;Dbxref=GenBank:WP_223959095.1;Name=WP_223959095.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS01265;product=hypothetical protein;protein_id=WP_223959095.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 45877 46254 . + . ID=gene-LDO45_RS01270;Name=LDO45_RS01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01270;old_locus_tag=BDI4_100051 NZ_CAJZAS010000002.1 Protein Homology CDS 45877 46254 . + 0 ID=cds-WP_223959097.1;Parent=gene-LDO45_RS01270;Dbxref=GenBank:WP_223959097.1;Name=WP_223959097.1;Ontology_term=GO:0006260,GO:0003678,GO:0005524;gbkey=CDS;go_function=DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:NF012974.5;locus_tag=LDO45_RS01270;product=DnaB-like helicase N-terminal domain-containing protein;protein_id=WP_223959097.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 46238 47191 . + . ID=gene-LDO45_RS01275;Name=LDO45_RS01275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01275;old_locus_tag=BDI4_100052 NZ_CAJZAS010000002.1 GeneMarkS-2+ CDS 46238 47191 . + 0 ID=cds-WP_223959100.1;Parent=gene-LDO45_RS01275;Dbxref=GenBank:WP_223959100.1;Name=WP_223959100.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS01275;product=hypothetical protein;protein_id=WP_223959100.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 47267 47440 . - . ID=gene-LDO45_RS01280;Name=LDO45_RS01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01280 NZ_CAJZAS010000002.1 GeneMarkS-2+ CDS 47267 47440 . - 0 ID=cds-WP_223959102.1;Parent=gene-LDO45_RS01280;Dbxref=GenBank:WP_223959102.1;Name=WP_223959102.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS01280;product=hypothetical protein;protein_id=WP_223959102.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 47492 48088 . + . ID=gene-LDO45_RS01285;Name=LDO45_RS01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01285;old_locus_tag=BDI4_100053 NZ_CAJZAS010000002.1 GeneMarkS-2+ CDS 47492 48088 . + 0 ID=cds-WP_223959104.1;Parent=gene-LDO45_RS01285;Dbxref=GenBank:WP_223959104.1;Name=WP_223959104.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS01285;product=hypothetical protein;protein_id=WP_223959104.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 48137 48364 . + . ID=gene-LDO45_RS01290;Name=LDO45_RS01290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01290;old_locus_tag=BDI4_100054 NZ_CAJZAS010000002.1 GeneMarkS-2+ CDS 48137 48364 . + 0 ID=cds-WP_223959113.1;Parent=gene-LDO45_RS01290;Dbxref=GenBank:WP_223959113.1;Name=WP_223959113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS01290;product=hypothetical protein;protein_id=WP_223959113.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 48503 49405 . - . ID=gene-LDO45_RS01295;Name=LDO45_RS01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01295;old_locus_tag=BDI4_100055 NZ_CAJZAS010000002.1 Protein Homology CDS 48503 49405 . - 0 ID=cds-WP_223959116.1;Parent=gene-LDO45_RS01295;Dbxref=GenBank:WP_223959116.1;Name=WP_223959116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397083.1;locus_tag=LDO45_RS01295;product=hypothetical protein;protein_id=WP_223959116.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 50264 52015 . - . ID=gene-LDO45_RS01300;Name=LDO45_RS01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01300;old_locus_tag=BDI4_100058 NZ_CAJZAS010000002.1 Protein Homology CDS 50264 52015 . - 0 ID=cds-WP_223959126.1;Parent=gene-LDO45_RS01300;Dbxref=GenBank:WP_223959126.1;Name=WP_223959126.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658790.1;locus_tag=LDO45_RS01300;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_223959126.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 52194 52646 . - . ID=gene-LDO45_RS01305;Name=LDO45_RS01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01305;old_locus_tag=BDI4_100060 NZ_CAJZAS010000002.1 GeneMarkS-2+ CDS 52194 52646 . - 0 ID=cds-WP_223959118.1;Parent=gene-LDO45_RS01305;Dbxref=GenBank:WP_223959118.1;Name=WP_223959118.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS01305;product=hypothetical protein;protein_id=WP_223959118.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 52673 63358 . - . ID=gene-LDO45_RS01310;Name=LDO45_RS01310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01310;old_locus_tag=BDI4_100061 NZ_CAJZAS010000002.1 Protein Homology CDS 52673 63358 . - 0 ID=cds-WP_223959120.1;Parent=gene-LDO45_RS01310;Dbxref=GenBank:WP_223959120.1;Name=WP_223959120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881332.1;locus_tag=LDO45_RS01310;product=hemagglutinin repeat-containing protein;protein_id=WP_223959120.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 63512 63820 . - . ID=gene-LDO45_RS01315;Name=LDO45_RS01315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01315;old_locus_tag=BDI4_100063 NZ_CAJZAS010000002.1 GeneMarkS-2+ CDS 63512 63820 . - 0 ID=cds-WP_223959122.1;Parent=gene-LDO45_RS01315;Dbxref=GenBank:WP_223959122.1;Name=WP_223959122.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS01315;product=hypothetical protein;protein_id=WP_223959122.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq gene 63846 64388 . - . ID=gene-LDO45_RS01320;Name=LDO45_RS01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01320 NZ_CAJZAS010000002.1 GeneMarkS-2+ CDS 63846 64388 . - 0 ID=cds-WP_223959124.1;Parent=gene-LDO45_RS01320;Dbxref=GenBank:WP_223959124.1;Name=WP_223959124.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS01320;product=hypothetical protein;protein_id=WP_223959124.1;transl_table=11 NZ_CAJZAS010000002.1 RefSeq pseudogene 64724 65108 . + . ID=gene-LDO45_RS01325;Name=LDO45_RS01325;end_range=65108,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS01325;partial=true;pseudo=true NZ_CAJZAS010000002.1 GeneMarkS-2+ CDS 64724 65108 . + 0 ID=cds-LDO45_RS01325;Parent=gene-LDO45_RS01325;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=65108,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS01325;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000003.1 1 668 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000003.1 RefSeq region 1 668 . + . ID=NZ_CAJZAS010000003.1:1..668;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_100 NZ_CAJZAS010000003.1 RefSeq pseudogene 392 668 . + . ID=gene-LDO45_RS01330;Name=LDO45_RS01330;end_range=668,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS01330;partial=true;pseudo=true NZ_CAJZAS010000003.1 Protein Homology CDS 392 668 . + 0 ID=cds-LDO45_RS01330;Parent=gene-LDO45_RS01330;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=668,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356460.1;locus_tag=LDO45_RS01330;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000004.1 1 77258 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000004.1 RefSeq region 1 77258 . + . ID=NZ_CAJZAS010000004.1:1..77258;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_101 NZ_CAJZAS010000004.1 RefSeq gene 1 1469 . - . ID=gene-LDO45_RS01335;Name=LDO45_RS01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01335;old_locus_tag=BDI4_1010002;partial=true;start_range=.,1 NZ_CAJZAS010000004.1 Protein Homology CDS 1 1469 . - 0 ID=cds-WP_374109502.1;Parent=gene-LDO45_RS01335;Dbxref=GenBank:WP_374109502.1;Name=WP_374109502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493538.1;locus_tag=LDO45_RS01335;partial=true;product=acetate--CoA ligase;protein_id=WP_374109502.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq pseudogene 1695 2267 . - . ID=gene-LDO45_RS01340;Name=LDO45_RS01340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS01340;old_locus_tag=BDI4_1010003;partial=true;pseudo=true;start_range=.,1695 NZ_CAJZAS010000004.1 Protein Homology CDS 1695 2267 . - 0 ID=cds-LDO45_RS01340;Parent=gene-LDO45_RS01340;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399103.1;locus_tag=LDO45_RS01340;partial=true;product=sigma-70 factor domain-containing protein;pseudo=true;start_range=.,1695;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 2251 2568 . - . ID=gene-LDO45_RS01345;Name=LDO45_RS01345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01345;old_locus_tag=BDI4_1010004 NZ_CAJZAS010000004.1 Protein Homology CDS 2251 2568 . - 0 ID=cds-WP_059510566.1;Parent=gene-LDO45_RS01345;Dbxref=GenBank:WP_059510566.1;Name=WP_059510566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399102.1;locus_tag=LDO45_RS01345;product=high-potential iron-sulfur protein;protein_id=WP_059510566.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 2644 3903 . - . ID=gene-LDO45_RS01350;Name=LDO45_RS01350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01350;old_locus_tag=BDI4_1010005 NZ_CAJZAS010000004.1 Protein Homology CDS 2644 3903 . - 0 ID=cds-WP_223959128.1;Parent=gene-LDO45_RS01350;Dbxref=GenBank:WP_223959128.1;Name=WP_223959128.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880614.1;locus_tag=LDO45_RS01350;product=c-type cytochrome;protein_id=WP_223959128.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 3986 5713 . - . ID=gene-LDO45_RS01355;Name=LDO45_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01355;old_locus_tag=BDI4_1010006 NZ_CAJZAS010000004.1 Protein Homology CDS 3986 5713 . - 0 ID=cds-WP_059690429.1;Parent=gene-LDO45_RS01355;Dbxref=GenBank:WP_059690429.1;Name=WP_059690429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372240.1;locus_tag=LDO45_RS01355;product=methanol/ethanol family PQQ-dependent dehydrogenase;protein_id=WP_059690429.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 6056 7039 . + . ID=gene-LDO45_RS01360;Name=LDO45_RS01360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01360;old_locus_tag=BDI4_1010008 NZ_CAJZAS010000004.1 Protein Homology CDS 6056 7039 . + 0 ID=cds-WP_223959129.1;Parent=gene-LDO45_RS01360;Dbxref=GenBank:WP_223959129.1;Name=WP_223959129.1;Ontology_term=GO:0031992,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=energy transducer activity|0031992||IEA;inference=COORDINATES: protein motif:HMM:NF015506.5;locus_tag=LDO45_RS01360;product=energy transducer TonB;protein_id=WP_223959129.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 7050 7769 . + . ID=gene-LDO45_RS01365;Name=LDO45_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01365;old_locus_tag=BDI4_1010009 NZ_CAJZAS010000004.1 Protein Homology CDS 7050 7769 . + 0 ID=cds-WP_223959130.1;Parent=gene-LDO45_RS01365;Dbxref=GenBank:WP_223959130.1;Name=WP_223959130.1;Ontology_term=GO:0015031,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: protein motif:HMM:NF013760.5;locus_tag=LDO45_RS01365;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_223959130.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 7766 8194 . + . ID=gene-LDO45_RS01370;Name=LDO45_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01370;old_locus_tag=BDI4_1010010 NZ_CAJZAS010000004.1 Protein Homology CDS 7766 8194 . + 0 ID=cds-WP_223959131.1;Parent=gene-LDO45_RS01370;Dbxref=GenBank:WP_223959131.1;Name=WP_223959131.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: protein motif:HMM:NF014525.5;locus_tag=LDO45_RS01370;product=biopolymer transporter ExbD;protein_id=WP_223959131.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 8283 10583 . + . ID=gene-LDO45_RS01375;Name=LDO45_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01375;old_locus_tag=BDI4_1010011 NZ_CAJZAS010000004.1 Protein Homology CDS 8283 10583 . + 0 ID=cds-WP_223959132.1;Parent=gene-LDO45_RS01375;Dbxref=GenBank:WP_223959132.1;Name=WP_223959132.1;Ontology_term=GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726244.1;locus_tag=LDO45_RS01375;product=TonB-dependent receptor;protein_id=WP_223959132.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 10568 11545 . - . ID=gene-LDO45_RS01380;Name=LDO45_RS01380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01380;old_locus_tag=BDI4_1010012 NZ_CAJZAS010000004.1 Protein Homology CDS 10568 11545 . - 0 ID=cds-WP_223959133.1;Parent=gene-LDO45_RS01380;Dbxref=GenBank:WP_223959133.1;Name=WP_223959133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755205.1;locus_tag=LDO45_RS01380;product=alpha/beta fold hydrolase;protein_id=WP_223959133.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 11865 13874 . + . ID=gene-LDO45_RS01385;Name=LDO45_RS01385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01385;old_locus_tag=BDI4_1010014 NZ_CAJZAS010000004.1 Protein Homology CDS 11865 13874 . + 0 ID=cds-WP_223959136.1;Parent=gene-LDO45_RS01385;Dbxref=GenBank:WP_223959136.1;Name=WP_223959136.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661039.1;locus_tag=LDO45_RS01385;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_223959136.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 14167 14241 . + . ID=gene-LDO45_RS01390;Name=pqqA;gbkey=Gene;gene=pqqA;gene_biotype=protein_coding;locus_tag=LDO45_RS01390 NZ_CAJZAS010000004.1 Protein Homology CDS 14167 14241 . + 0 ID=cds-WP_006410019.1;Parent=gene-LDO45_RS01390;Dbxref=GenBank:WP_006410019.1;Name=WP_006410019.1;Ontology_term=GO:0018189,GO:0003824;gbkey=CDS;gene=pqqA;go_function=catalytic activity|0003824||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007178434.1;locus_tag=LDO45_RS01390;product=pyrroloquinoline quinone precursor peptide PqqA;protein_id=WP_006410019.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 14306 15229 . + . ID=gene-LDO45_RS01395;Name=pqqB;gbkey=Gene;gene=pqqB;gene_biotype=protein_coding;locus_tag=LDO45_RS01395;old_locus_tag=BDI4_1010016 NZ_CAJZAS010000004.1 Protein Homology CDS 14306 15229 . + 0 ID=cds-WP_059529197.1;Parent=gene-LDO45_RS01395;Dbxref=GenBank:WP_059529197.1;Name=WP_059529197.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqB;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547063.1;locus_tag=LDO45_RS01395;product=pyrroloquinoline quinone biosynthesis protein PqqB;protein_id=WP_059529197.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 15232 15951 . + . ID=gene-LDO45_RS01400;Name=pqqC;gbkey=Gene;gene=pqqC;gene_biotype=protein_coding;locus_tag=LDO45_RS01400;old_locus_tag=BDI4_1010017 NZ_CAJZAS010000004.1 Protein Homology CDS 15232 15951 . + 0 ID=cds-WP_223959138.1;Parent=gene-LDO45_RS01400;Dbxref=GenBank:WP_223959138.1;Name=WP_223959138.1;Ontology_term=GO:0018189;gbkey=CDS;gene=pqqC;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726239.1;locus_tag=LDO45_RS01400;product=pyrroloquinoline-quinone synthase PqqC;protein_id=WP_223959138.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 15948 16229 . + . ID=gene-LDO45_RS01405;Name=pqqD;gbkey=Gene;gene=pqqD;gene_biotype=protein_coding;locus_tag=LDO45_RS01405;old_locus_tag=BDI4_1010018 NZ_CAJZAS010000004.1 Protein Homology CDS 15948 16229 . + 0 ID=cds-WP_006751646.1;Parent=gene-LDO45_RS01405;Dbxref=GenBank:WP_006751646.1;Name=WP_006751646.1;Ontology_term=GO:0018189,GO:0048038;gbkey=CDS;gene=pqqD;go_function=quinone binding|0048038||IEA;go_process=pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751646.1;locus_tag=LDO45_RS01405;product=pyrroloquinoline quinone biosynthesis peptide chaperone PqqD;protein_id=WP_006751646.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 16237 17355 . + . ID=gene-LDO45_RS01410;Name=pqqE;gbkey=Gene;gene=pqqE;gene_biotype=protein_coding;locus_tag=LDO45_RS01410;old_locus_tag=BDI4_1010019 NZ_CAJZAS010000004.1 Protein Homology CDS 16237 17355 . + 0 ID=cds-WP_223959140.1;Parent=gene-LDO45_RS01410;Dbxref=GenBank:WP_223959140.1;Name=WP_223959140.1;Ontology_term=GO:0018149,GO:0018189,GO:0051539;gbkey=CDS;gene=pqqE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptide cross-linking|0018149||IEA,pyrroloquinoline quinone biosynthetic process|0018189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498719.1;locus_tag=LDO45_RS01410;product=pyrroloquinoline quinone biosynthesis protein PqqE;protein_id=WP_223959140.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 17407 18453 . - . ID=gene-LDO45_RS01415;Name=LDO45_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01415;old_locus_tag=BDI4_1010020 NZ_CAJZAS010000004.1 Protein Homology CDS 17407 18453 . - 0 ID=cds-WP_223959142.1;Parent=gene-LDO45_RS01415;Dbxref=GenBank:WP_223959142.1;Name=WP_223959142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399087.1;locus_tag=LDO45_RS01415;product=DNA topoisomerase IB;protein_id=WP_223959142.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 18879 19841 . + . ID=gene-LDO45_RS01420;Name=LDO45_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01420;old_locus_tag=BDI4_1010022 NZ_CAJZAS010000004.1 Protein Homology CDS 18879 19841 . + 0 ID=cds-WP_059529188.1;Parent=gene-LDO45_RS01420;Dbxref=GenBank:WP_059529188.1;Name=WP_059529188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880603.1;locus_tag=LDO45_RS01420;product=ABC transporter substrate-binding protein;protein_id=WP_059529188.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 19910 21424 . + . ID=gene-LDO45_RS01425;Name=LDO45_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01425;old_locus_tag=BDI4_1010021 NZ_CAJZAS010000004.1 Protein Homology CDS 19910 21424 . + 0 ID=cds-WP_223959144.1;Parent=gene-LDO45_RS01425;Dbxref=GenBank:WP_223959144.1;Name=WP_223959144.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756526.1;locus_tag=LDO45_RS01425;product=sugar ABC transporter ATP-binding protein;protein_id=WP_223959144.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 21421 22461 . + . ID=gene-LDO45_RS01430;Name=LDO45_RS01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01430;old_locus_tag=BDI4_1010023 NZ_CAJZAS010000004.1 Protein Homology CDS 21421 22461 . + 0 ID=cds-WP_223959146.1;Parent=gene-LDO45_RS01430;Dbxref=GenBank:WP_223959146.1;Name=WP_223959146.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891042.1;locus_tag=LDO45_RS01430;product=ABC transporter permease;protein_id=WP_223959146.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 22458 23570 . + . ID=gene-LDO45_RS01435;Name=yjfF;gbkey=Gene;gene=yjfF;gene_biotype=protein_coding;locus_tag=LDO45_RS01435;old_locus_tag=BDI4_1010024 NZ_CAJZAS010000004.1 Protein Homology CDS 22458 23570 . + 0 ID=cds-WP_223959148.1;Parent=gene-LDO45_RS01435;Dbxref=GenBank:WP_223959148.1;Name=WP_223959148.1;Ontology_term=GO:0042875,GO:0103116,GO:0016020;gbkey=CDS;gene=yjfF;go_component=membrane|0016020||IEA;go_function=ABC-type D-galactofuranose transporter|0103116||IEA;go_process=D-galactonate transmembrane transport|0042875||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335457.1;locus_tag=LDO45_RS01435;product=galactofuranose ABC transporter%2C permease protein YjfF;protein_id=WP_223959148.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 23721 26054 . - . ID=gene-LDO45_RS01440;Name=LDO45_RS01440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01440;old_locus_tag=BDI4_1010025 NZ_CAJZAS010000004.1 Protein Homology CDS 23721 26054 . - 0 ID=cds-WP_223959150.1;Parent=gene-LDO45_RS01440;Dbxref=GenBank:WP_223959150.1;Name=WP_223959150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880599.1;locus_tag=LDO45_RS01440;product=sensor histidine kinase;protein_id=WP_223959150.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 26047 26880 . - . ID=gene-LDO45_RS01445;Name=LDO45_RS01445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01445;old_locus_tag=BDI4_1010026 NZ_CAJZAS010000004.1 Protein Homology CDS 26047 26880 . - 0 ID=cds-WP_059701003.1;Parent=gene-LDO45_RS01445;Dbxref=GenBank:WP_059701003.1;Name=WP_059701003.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661073.1;locus_tag=LDO45_RS01445;product=response regulator;protein_id=WP_059701003.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 27821 27949 . + . ID=gene-LDO45_RS34150;Name=LDO45_RS34150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34150;old_locus_tag=BDI4_1010029 NZ_CAJZAS010000004.1 GeneMarkS-2+ CDS 27821 27949 . + 0 ID=cds-WP_290370982.1;Parent=gene-LDO45_RS34150;Dbxref=GenBank:WP_290370982.1;Name=WP_290370982.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34150;product=hypothetical protein;protein_id=WP_290370982.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 28364 32230 . + . ID=gene-LDO45_RS01450;Name=LDO45_RS01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01450;old_locus_tag=BDI4_1010030 NZ_CAJZAS010000004.1 Protein Homology CDS 28364 32230 . + 0 ID=cds-WP_223959152.1;Parent=gene-LDO45_RS01450;Dbxref=GenBank:WP_223959152.1;Name=WP_223959152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485575.1;locus_tag=LDO45_RS01450;product=YadA-like family protein;protein_id=WP_223959152.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 32356 33018 . + . ID=gene-LDO45_RS01455;Name=LDO45_RS01455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01455;old_locus_tag=BDI4_1010031 NZ_CAJZAS010000004.1 Protein Homology CDS 32356 33018 . + 0 ID=cds-WP_223959153.1;Parent=gene-LDO45_RS01455;Dbxref=GenBank:WP_223959153.1;Name=WP_223959153.1;Ontology_term=GO:0015288,GO:0042834;gbkey=CDS;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756520.1;locus_tag=LDO45_RS01455;product=OmpA family protein;protein_id=WP_223959153.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 33222 34136 . + . ID=gene-LDO45_RS01460;Name=LDO45_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01460;old_locus_tag=BDI4_1010032 NZ_CAJZAS010000004.1 Protein Homology CDS 33222 34136 . + 0 ID=cds-WP_223959155.1;Parent=gene-LDO45_RS01460;Dbxref=GenBank:WP_223959155.1;Name=WP_223959155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372285.1;locus_tag=LDO45_RS01460;product=LysR substrate-binding domain-containing protein;protein_id=WP_223959155.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 34319 35593 . + . ID=gene-LDO45_RS01465;Name=LDO45_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01465;old_locus_tag=BDI4_1010033 NZ_CAJZAS010000004.1 Protein Homology CDS 34319 35593 . + 0 ID=cds-WP_223959157.1;Parent=gene-LDO45_RS01465;Dbxref=GenBank:WP_223959157.1;Name=WP_223959157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007739968.1;locus_tag=LDO45_RS01465;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_223959157.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 35590 37050 . + . ID=gene-LDO45_RS01470;Name=LDO45_RS01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01470;old_locus_tag=BDI4_1010034 NZ_CAJZAS010000004.1 Protein Homology CDS 35590 37050 . + 0 ID=cds-WP_223959159.1;Parent=gene-LDO45_RS01470;Dbxref=GenBank:WP_223959159.1;Name=WP_223959159.1;Ontology_term=GO:0006520,GO:0047661;gbkey=CDS;go_function=amino-acid racemase activity|0047661||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751623.1;locus_tag=LDO45_RS01470;product=amino acid racemase;protein_id=WP_223959159.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 37254 43157 . + . ID=gene-LDO45_RS01475;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=LDO45_RS01475;old_locus_tag=BDI4_1010035 NZ_CAJZAS010000004.1 Protein Homology CDS 37254 43157 . + 0 ID=cds-WP_223959161.1;Parent=gene-LDO45_RS01475;Dbxref=GenBank:WP_223959161.1;Name=WP_223959161.1;Ontology_term=GO:0006289,GO:0003677,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrA;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336984.1;locus_tag=LDO45_RS01475;product=excinuclease ABC subunit UvrA;protein_id=WP_223959161.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 43244 44185 . - . ID=gene-LDO45_RS01480;Name=LDO45_RS01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01480;old_locus_tag=BDI4_1010036 NZ_CAJZAS010000004.1 Protein Homology CDS 43244 44185 . - 0 ID=cds-WP_223959169.1;Parent=gene-LDO45_RS01480;Dbxref=GenBank:WP_223959169.1;Name=WP_223959169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372289.1;locus_tag=LDO45_RS01480;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_223959169.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 44199 45506 . - . ID=gene-LDO45_RS01485;Name=LDO45_RS01485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01485;old_locus_tag=BDI4_1010037 NZ_CAJZAS010000004.1 Protein Homology CDS 44199 45506 . - 0 ID=cds-WP_059529163.1;Parent=gene-LDO45_RS01485;Dbxref=GenBank:WP_059529163.1;Name=WP_059529163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336982.1;locus_tag=LDO45_RS01485;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_059529163.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 46106 46975 . + . ID=gene-LDO45_RS01490;Name=LDO45_RS01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01490;old_locus_tag=BDI4_1010038 NZ_CAJZAS010000004.1 Protein Homology CDS 46106 46975 . + 0 ID=cds-WP_223959239.1;Parent=gene-LDO45_RS01490;Dbxref=GenBank:WP_223959239.1;Name=WP_223959239.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661128.1;locus_tag=LDO45_RS01490;product=CoA ester lyase;protein_id=WP_223959239.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 47191 47556 . - . ID=gene-LDO45_RS01495;Name=LDO45_RS01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01495;old_locus_tag=BDI4_1010039 NZ_CAJZAS010000004.1 GeneMarkS-2+ CDS 47191 47556 . - 0 ID=cds-WP_223959171.1;Parent=gene-LDO45_RS01495;Dbxref=GenBank:WP_223959171.1;Name=WP_223959171.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS01495;product=hypothetical protein;protein_id=WP_223959171.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 47665 48117 . - . ID=gene-LDO45_RS01500;Name=LDO45_RS01500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01500;old_locus_tag=BDI4_1010040 NZ_CAJZAS010000004.1 Protein Homology CDS 47665 48117 . - 0 ID=cds-WP_223959173.1;Parent=gene-LDO45_RS01500;Dbxref=GenBank:WP_223959173.1;Name=WP_223959173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011803358.1;locus_tag=LDO45_RS01500;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_223959173.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 48407 49498 . + . ID=gene-LDO45_RS01505;Name=LDO45_RS01505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01505;old_locus_tag=BDI4_1010041 NZ_CAJZAS010000004.1 Protein Homology CDS 48407 49498 . + 0 ID=cds-WP_223959175.1;Parent=gene-LDO45_RS01505;Dbxref=GenBank:WP_223959175.1;Name=WP_223959175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017775547.1;locus_tag=LDO45_RS01505;product=nitroreductase family protein;protein_id=WP_223959175.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 49745 50146 . - . ID=gene-LDO45_RS01510;Name=LDO45_RS01510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01510;old_locus_tag=BDI4_1010043 NZ_CAJZAS010000004.1 Protein Homology CDS 49745 50146 . - 0 ID=cds-WP_223959178.1;Parent=gene-LDO45_RS01510;Dbxref=GenBank:WP_223959178.1;Name=WP_223959178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012426578.1;locus_tag=LDO45_RS01510;product=hypothetical protein;protein_id=WP_223959178.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 50870 53884 . + . ID=gene-LDO45_RS01515;Name=LDO45_RS01515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01515;old_locus_tag=BDI4_1010045 NZ_CAJZAS010000004.1 Protein Homology CDS 50870 53884 . + 0 ID=cds-WP_223959179.1;Parent=gene-LDO45_RS01515;Dbxref=GenBank:WP_223959179.1;Name=WP_223959179.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013945.5;locus_tag=LDO45_RS01515;product=MAC/perforin domain-containing protein;protein_id=WP_223959179.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 54566 55042 . - . ID=gene-LDO45_RS01520;Name=LDO45_RS01520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01520 NZ_CAJZAS010000004.1 Protein Homology CDS 54566 55042 . - 0 ID=cds-WP_308051015.1;Parent=gene-LDO45_RS01520;Dbxref=GenBank:WP_308051015.1;Name=WP_308051015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010466125.1;locus_tag=LDO45_RS01520;product=RidA family protein;protein_id=WP_308051015.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 55338 56243 . - . ID=gene-LDO45_RS01525;Name=LDO45_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01525;old_locus_tag=BDI4_1010048 NZ_CAJZAS010000004.1 Protein Homology CDS 55338 56243 . - 0 ID=cds-WP_223959181.1;Parent=gene-LDO45_RS01525;Dbxref=GenBank:WP_223959181.1;Name=WP_223959181.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337044.1;locus_tag=LDO45_RS01525;product=LysR family transcriptional regulator;protein_id=WP_223959181.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 56363 56953 . + . ID=gene-LDO45_RS01530;Name=LDO45_RS01530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01530;old_locus_tag=BDI4_1010049 NZ_CAJZAS010000004.1 Protein Homology CDS 56363 56953 . + 0 ID=cds-WP_223959249.1;Parent=gene-LDO45_RS01530;Dbxref=GenBank:WP_223959249.1;Name=WP_223959249.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366281.1;locus_tag=LDO45_RS01530;product=flavodoxin family protein;protein_id=WP_223959249.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 57025 58080 . + . ID=gene-LDO45_RS01535;Name=LDO45_RS01535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01535;old_locus_tag=BDI4_1010050 NZ_CAJZAS010000004.1 Protein Homology CDS 57025 58080 . + 0 ID=cds-WP_223959189.1;Parent=gene-LDO45_RS01535;Dbxref=GenBank:WP_223959189.1;Name=WP_223959189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549240.1;locus_tag=LDO45_RS01535;product=aldo/keto reductase;protein_id=WP_223959189.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 58210 59649 . + . ID=gene-LDO45_RS01540;Name=LDO45_RS01540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01540;old_locus_tag=BDI4_1010051 NZ_CAJZAS010000004.1 Protein Homology CDS 58210 59649 . + 0 ID=cds-WP_223959197.1;Parent=gene-LDO45_RS01540;Dbxref=GenBank:WP_223959197.1;Name=WP_223959197.1;Ontology_term=GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349951.1;locus_tag=LDO45_RS01540;product=DEAD/DEAH box helicase;protein_id=WP_223959197.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq pseudogene 59743 59856 . + . ID=gene-LDO45_RS01545;Name=LDO45_RS01545;end_range=59856,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS01545;partial=true;pseudo=true;start_range=.,59743 NZ_CAJZAS010000004.1 Protein Homology CDS 59743 59856 . + 0 ID=cds-LDO45_RS01545;Parent=gene-LDO45_RS01545;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=59856,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020068767.1;locus_tag=LDO45_RS01545;partial=true;product=SDR family NAD(P)-dependent oxidoreductase;pseudo=true;start_range=.,59743;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 60023 60364 . - . ID=gene-LDO45_RS01550;Name=LDO45_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01550;old_locus_tag=BDI4_1010052 NZ_CAJZAS010000004.1 Protein Homology CDS 60023 60364 . - 0 ID=cds-WP_059535940.1;Parent=gene-LDO45_RS01550;Dbxref=GenBank:WP_059535940.1;Name=WP_059535940.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350045.1;locus_tag=LDO45_RS01550;product=cytochrome C oxidase subunit IV family protein;protein_id=WP_059535940.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 60373 61080 . - . ID=gene-LDO45_RS01555;Name=LDO45_RS01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01555;old_locus_tag=BDI4_1010053 NZ_CAJZAS010000004.1 Protein Homology CDS 60373 61080 . - 0 ID=cds-WP_059690457.1;Parent=gene-LDO45_RS01555;Dbxref=GenBank:WP_059690457.1;Name=WP_059690457.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003261352.1;locus_tag=LDO45_RS01555;product=heme-copper oxidase subunit III family protein;protein_id=WP_059690457.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 61077 61691 . - . ID=gene-LDO45_RS01560;Name=LDO45_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01560;old_locus_tag=BDI4_1010054 NZ_CAJZAS010000004.1 Protein Homology CDS 61077 61691 . - 0 ID=cds-WP_059535946.1;Parent=gene-LDO45_RS01560;Dbxref=GenBank:WP_059535946.1;Name=WP_059535946.1;Ontology_term=GO:0004129,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334946.1;locus_tag=LDO45_RS01560;product=cytochrome c oxidase subunit 3;protein_id=WP_059535946.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 61688 63448 . - . ID=gene-LDO45_RS01565;Name=ctaD;gbkey=Gene;gene=ctaD;gene_biotype=protein_coding;locus_tag=LDO45_RS01565;old_locus_tag=BDI4_1010055 NZ_CAJZAS010000004.1 Protein Homology CDS 61688 63448 . - 0 ID=cds-WP_223959204.1;Parent=gene-LDO45_RS01565;Dbxref=GenBank:WP_223959204.1;Name=WP_223959204.1;Ontology_term=GO:0015990,GO:0004129;gbkey=CDS;gene=ctaD;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661084.1;locus_tag=LDO45_RS01565;product=cytochrome c oxidase subunit I;protein_id=WP_223959204.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 63462 64616 . - . ID=gene-LDO45_RS01570;Name=LDO45_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01570;old_locus_tag=BDI4_1010056 NZ_CAJZAS010000004.1 Protein Homology CDS 63462 64616 . - 0 ID=cds-WP_223959212.1;Parent=gene-LDO45_RS01570;Dbxref=GenBank:WP_223959212.1;Name=WP_223959212.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372280.1;locus_tag=LDO45_RS01570;product=cytochrome c oxidase subunit II;protein_id=WP_223959212.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 64934 65446 . - . ID=gene-LDO45_RS01575;Name=LDO45_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01575;old_locus_tag=BDI4_1010057 NZ_CAJZAS010000004.1 Protein Homology CDS 64934 65446 . - 0 ID=cds-WP_059535952.1;Parent=gene-LDO45_RS01575;Dbxref=GenBank:WP_059535952.1;Name=WP_059535952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003274273.1;locus_tag=LDO45_RS01575;product=hypothetical protein;protein_id=WP_059535952.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 65503 66012 . - . ID=gene-LDO45_RS01580;Name=LDO45_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01580;old_locus_tag=BDI4_1010058 NZ_CAJZAS010000004.1 Protein Homology CDS 65503 66012 . - 0 ID=cds-WP_059535954.1;Parent=gene-LDO45_RS01580;Dbxref=GenBank:WP_059535954.1;Name=WP_059535954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602514.1;locus_tag=LDO45_RS01580;product=hypothetical protein;protein_id=WP_059535954.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 66212 67390 . - . ID=gene-LDO45_RS01585;Name=LDO45_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01585;old_locus_tag=BDI4_1010059 NZ_CAJZAS010000004.1 Protein Homology CDS 66212 67390 . - 0 ID=cds-WP_223959214.1;Parent=gene-LDO45_RS01585;Dbxref=GenBank:WP_223959214.1;Name=WP_223959214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661142.1;locus_tag=LDO45_RS01585;product=CaiB/BaiF CoA-transferase family protein;protein_id=WP_223959214.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 67404 68561 . - . ID=gene-LDO45_RS01590;Name=LDO45_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01590;old_locus_tag=BDI4_1010060 NZ_CAJZAS010000004.1 Protein Homology CDS 67404 68561 . - 0 ID=cds-WP_059690462.1;Parent=gene-LDO45_RS01590;Dbxref=GenBank:WP_059690462.1;Name=WP_059690462.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661143.1;locus_tag=LDO45_RS01590;product=acyl-CoA dehydrogenase family protein;protein_id=WP_059690462.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 68580 69437 . - . ID=gene-LDO45_RS01595;Name=LDO45_RS01595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01595;old_locus_tag=BDI4_1010061 NZ_CAJZAS010000004.1 Protein Homology CDS 68580 69437 . - 0 ID=cds-WP_374109503.1;Parent=gene-LDO45_RS01595;Dbxref=GenBank:WP_374109503.1;Name=WP_374109503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350406.1;locus_tag=LDO45_RS01595;product=MaoC family dehydratase N-terminal domain-containing protein;protein_id=WP_374109503.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 69569 70519 . + . ID=gene-LDO45_RS01600;Name=LDO45_RS01600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01600;old_locus_tag=BDI4_1010062 NZ_CAJZAS010000004.1 Protein Homology CDS 69569 70519 . + 0 ID=cds-WP_223959231.1;Parent=gene-LDO45_RS01600;Dbxref=GenBank:WP_223959231.1;Name=WP_223959231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372318.1;locus_tag=LDO45_RS01600;product=LysR substrate-binding domain-containing protein;protein_id=WP_223959231.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 70965 71927 . + . ID=gene-LDO45_RS01605;Name=LDO45_RS01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01605;old_locus_tag=BDI4_1010063 NZ_CAJZAS010000004.1 Protein Homology CDS 70965 71927 . + 0 ID=cds-WP_223959233.1;Parent=gene-LDO45_RS01605;Dbxref=GenBank:WP_223959233.1;Name=WP_223959233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759793.1;locus_tag=LDO45_RS01605;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_223959233.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 72089 72487 . + . ID=gene-LDO45_RS01610;Name=LDO45_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01610;old_locus_tag=BDI4_1010064 NZ_CAJZAS010000004.1 Protein Homology CDS 72089 72487 . + 0 ID=cds-WP_223959235.1;Parent=gene-LDO45_RS01610;Dbxref=GenBank:WP_223959235.1;Name=WP_223959235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759794.1;locus_tag=LDO45_RS01610;product=DUF3467 domain-containing protein;protein_id=WP_223959235.1;transl_table=11 NZ_CAJZAS010000004.1 RefSeq gene 72497 76279 . + . ID=gene-LDO45_RS01615;Name=LDO45_RS01615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01615;old_locus_tag=BDI4_1010065 NZ_CAJZAS010000004.1 Protein Homology CDS 72497 76279 . + 0 ID=cds-WP_223959237.1;Parent=gene-LDO45_RS01615;Dbxref=GenBank:WP_223959237.1;Name=WP_223959237.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762553.1;locus_tag=LDO45_RS01615;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_223959237.1;transl_table=11 ##sequence-region NZ_CAJZAS010000005.1 1 4667 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000005.1 RefSeq region 1 4667 . + . ID=NZ_CAJZAS010000005.1:1..4667;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_102 NZ_CAJZAS010000005.1 RefSeq pseudogene 1 1721 . - . ID=gene-LDO45_RS34460;Name=LDO45_RS34460;end_range=1721,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34460;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000005.1 Protein Homology CDS 1 1721 . - 0 ID=cds-LDO45_RS34460;Parent=gene-LDO45_RS34460;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1721,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004539042.1;locus_tag=LDO45_RS34460;partial=true;product=hemagglutinin;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000005.1 RefSeq pseudogene 2070 2135 . - . ID=gene-LDO45_RS34465;Name=LDO45_RS34465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34465;partial=true;pseudo=true;start_range=.,2070 NZ_CAJZAS010000005.1 Protein Homology CDS 2070 2135 . - 0 ID=cds-LDO45_RS34465;Parent=gene-LDO45_RS34465;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024418.5;locus_tag=LDO45_RS34465;partial=true;product=ESPR-type extended signal peptide-containing protein;pseudo=true;start_range=.,2070;transl_table=11 NZ_CAJZAS010000005.1 RefSeq gene 2907 4430 . - . ID=gene-LDO45_RS01630;Name=LDO45_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01630;old_locus_tag=BDI4_1020005 NZ_CAJZAS010000005.1 Protein Homology CDS 2907 4430 . - 0 ID=cds-WP_223959251.1;Parent=gene-LDO45_RS01630;Dbxref=GenBank:WP_223959251.1;Name=WP_223959251.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015831.5;locus_tag=LDO45_RS01630;product=YadA family autotransporter adhesin;protein_id=WP_223959251.1;transl_table=11 NZ_CAJZAS010000005.1 RefSeq gene 4444 4667 . + . ID=gene-LDO45_RS01635;Name=LDO45_RS01635;end_range=4667,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01635;partial=true NZ_CAJZAS010000005.1 GeneMarkS-2+ CDS 4444 4667 . + 0 ID=cds-WP_223959254.1;Parent=gene-LDO45_RS01635;Dbxref=GenBank:WP_223959254.1;Name=WP_223959254.1;end_range=4667,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS01635;partial=true;product=hypothetical protein;protein_id=WP_223959254.1;transl_table=11 ##sequence-region NZ_CAJZAS010000006.1 1 3326 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000006.1 RefSeq region 1 3326 . + . ID=NZ_CAJZAS010000006.1:1..3326;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_103 NZ_CAJZAS010000006.1 RefSeq gene 232 744 . + . ID=gene-LDO45_RS01640;Name=LDO45_RS01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01640;old_locus_tag=BDI4_1030002 NZ_CAJZAS010000006.1 Protein Homology CDS 232 744 . + 0 ID=cds-WP_059524348.1;Parent=gene-LDO45_RS01640;Dbxref=GenBank:WP_059524348.1;Name=WP_059524348.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897027.1;locus_tag=LDO45_RS01640;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_059524348.1;transl_table=11 NZ_CAJZAS010000006.1 RefSeq gene 880 1584 . - . ID=gene-LDO45_RS01645;Name=LDO45_RS01645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01645;old_locus_tag=BDI4_1030003 NZ_CAJZAS010000006.1 Protein Homology CDS 880 1584 . - 0 ID=cds-WP_059449704.1;Parent=gene-LDO45_RS01645;Dbxref=GenBank:WP_059449704.1;Name=WP_059449704.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363895.1;locus_tag=LDO45_RS01645;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_059449704.1;transl_table=11 NZ_CAJZAS010000006.1 RefSeq gene 1816 2874 . - . ID=gene-LDO45_RS01650;Name=LDO45_RS01650;end_range=2874,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01650;old_locus_tag=BDI4_1030004;partial=true NZ_CAJZAS010000006.1 Protein Homology CDS 1816 2874 . - 0 ID=cds-WP_223959256.1;Parent=gene-LDO45_RS01650;Dbxref=GenBank:WP_223959256.1;Name=WP_223959256.1;Ontology_term=GO:0015288,GO:0009279;end_range=2874,.;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481520.1;locus_tag=LDO45_RS01650;partial=true;product=porin;protein_id=WP_223959256.1;transl_table=11 NZ_CAJZAS010000006.1 RefSeq gene 3158 3326 . - . ID=gene-LDO45_RS01655;Name=LDO45_RS01655;end_range=3326,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01655;old_locus_tag=BDI4_1030005;partial=true NZ_CAJZAS010000006.1 Protein Homology CDS 3158 3326 . - 1 ID=cds-WP_223959258.1;Parent=gene-LDO45_RS01655;Dbxref=GenBank:WP_223959258.1;Name=WP_223959258.1;end_range=3326,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363897.1;locus_tag=LDO45_RS01655;partial=true;product=helix-turn-helix transcriptional regulator;protein_id=WP_223959258.1;transl_table=11 ##sequence-region NZ_CAJZAS010000007.1 1 64866 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000007.1 RefSeq region 1 64866 . + . ID=NZ_CAJZAS010000007.1:1..64866;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_104 NZ_CAJZAS010000007.1 RefSeq gene 1 541 . + . ID=gene-LDO45_RS01660;Name=LDO45_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01660;old_locus_tag=BDI4_1040001;partial=true;start_range=.,1 NZ_CAJZAS010000007.1 Protein Homology CDS 1 541 . + 1 ID=cds-WP_223959260.1;Parent=gene-LDO45_RS01660;Dbxref=GenBank:WP_223959260.1;Name=WP_223959260.1;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898638.1;locus_tag=LDO45_RS01660;partial=true;product=NAD-binding protein;protein_id=WP_223959260.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 538 1329 . + . ID=gene-LDO45_RS01665;Name=LDO45_RS01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01665;old_locus_tag=BDI4_1040002 NZ_CAJZAS010000007.1 Protein Homology CDS 538 1329 . + 0 ID=cds-WP_223959262.1;Parent=gene-LDO45_RS01665;Dbxref=GenBank:WP_223959262.1;Name=WP_223959262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354326.1;locus_tag=LDO45_RS01665;product=enoyl-CoA hydratase;protein_id=WP_223959262.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 1326 2465 . + . ID=gene-LDO45_RS01670;Name=LDO45_RS01670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01670;old_locus_tag=BDI4_1040003 NZ_CAJZAS010000007.1 Protein Homology CDS 1326 2465 . + 0 ID=cds-WP_059527002.1;Parent=gene-LDO45_RS01670;Dbxref=GenBank:WP_059527002.1;Name=WP_059527002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412509.1;locus_tag=LDO45_RS01670;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_059527002.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 2538 3443 . - . ID=gene-LDO45_RS01675;Name=LDO45_RS01675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01675;old_locus_tag=BDI4_1040005 NZ_CAJZAS010000007.1 Protein Homology CDS 2538 3443 . - 0 ID=cds-WP_223959270.1;Parent=gene-LDO45_RS01675;Dbxref=GenBank:WP_223959270.1;Name=WP_223959270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339624.1;locus_tag=LDO45_RS01675;product=LysR family transcriptional regulator;protein_id=WP_223959270.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 3621 5159 . + . ID=gene-LDO45_RS01680;Name=LDO45_RS01680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01680;old_locus_tag=BDI4_1040006 NZ_CAJZAS010000007.1 Protein Homology CDS 3621 5159 . + 0 ID=cds-WP_223959272.1;Parent=gene-LDO45_RS01680;Dbxref=GenBank:WP_223959272.1;Name=WP_223959272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366627.1;locus_tag=LDO45_RS01680;product=MFS transporter;protein_id=WP_223959272.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 5195 5776 . - . ID=gene-LDO45_RS01685;Name=LDO45_RS01685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01685;old_locus_tag=BDI4_1040007 NZ_CAJZAS010000007.1 Protein Homology CDS 5195 5776 . - 0 ID=cds-WP_223959275.1;Parent=gene-LDO45_RS01685;Dbxref=GenBank:WP_223959275.1;Name=WP_223959275.1;Ontology_term=GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761408.1;locus_tag=LDO45_RS01685;product=HD domain-containing protein;protein_id=WP_223959275.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 5862 6419 . - . ID=gene-LDO45_RS01690;Name=LDO45_RS01690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01690;old_locus_tag=BDI4_1040008 NZ_CAJZAS010000007.1 Protein Homology CDS 5862 6419 . - 0 ID=cds-WP_223959277.1;Parent=gene-LDO45_RS01690;Dbxref=GenBank:WP_223959277.1;Name=WP_223959277.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761407.1;locus_tag=LDO45_RS01690;product=helix-turn-helix transcriptional regulator;protein_id=WP_223959277.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 6702 8105 . + . ID=gene-LDO45_RS01695;Name=LDO45_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01695;old_locus_tag=BDI4_1040009 NZ_CAJZAS010000007.1 Protein Homology CDS 6702 8105 . + 0 ID=cds-WP_223959279.1;Parent=gene-LDO45_RS01695;Dbxref=GenBank:WP_223959279.1;Name=WP_223959279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339629.1;locus_tag=LDO45_RS01695;product=HdeD family acid-resistance protein;protein_id=WP_223959279.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 8408 9139 . + . ID=gene-LDO45_RS01700;Name=LDO45_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01700;old_locus_tag=BDI4_1040010 NZ_CAJZAS010000007.1 Protein Homology CDS 8408 9139 . + 0 ID=cds-WP_059692096.1;Parent=gene-LDO45_RS01700;Dbxref=GenBank:WP_059692096.1;Name=WP_059692096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009971536.1;locus_tag=LDO45_RS01700;product=ribonuclease T2;protein_id=WP_059692096.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 9207 9842 . - . ID=gene-LDO45_RS01705;Name=LDO45_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01705;old_locus_tag=BDI4_1040011 NZ_CAJZAS010000007.1 Protein Homology CDS 9207 9842 . - 0 ID=cds-WP_223959280.1;Parent=gene-LDO45_RS01705;Dbxref=GenBank:WP_223959280.1;Name=WP_223959280.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761697.1;locus_tag=LDO45_RS01705;product=isochorismatase family cysteine hydrolase;protein_id=WP_223959280.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 10325 10675 . + . ID=gene-LDO45_RS01710;Name=LDO45_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01710;old_locus_tag=BDI4_1040012 NZ_CAJZAS010000007.1 GeneMarkS-2+ CDS 10325 10675 . + 0 ID=cds-WP_223959282.1;Parent=gene-LDO45_RS01710;Dbxref=GenBank:WP_223959282.1;Name=WP_223959282.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS01710;product=hypothetical protein;protein_id=WP_223959282.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 10808 11161 . + . ID=gene-LDO45_RS01715;Name=LDO45_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01715 NZ_CAJZAS010000007.1 Protein Homology CDS 10808 11161 . + 0 ID=cds-WP_096506446.1;Parent=gene-LDO45_RS01715;Dbxref=GenBank:WP_096506446.1;Name=WP_096506446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337449.1;locus_tag=LDO45_RS01715;product=colicin immunity protein;protein_id=WP_096506446.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 11370 11753 . + . ID=gene-LDO45_RS01720;Name=LDO45_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01720;old_locus_tag=BDI4_1040014 NZ_CAJZAS010000007.1 Protein Homology CDS 11370 11753 . + 0 ID=cds-WP_223959284.1;Parent=gene-LDO45_RS01720;Dbxref=GenBank:WP_223959284.1;Name=WP_223959284.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003057361.1;locus_tag=LDO45_RS01720;product=cytochrome c;protein_id=WP_223959284.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 11893 12807 . - . ID=gene-LDO45_RS01725;Name=LDO45_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01725;old_locus_tag=BDI4_1040015 NZ_CAJZAS010000007.1 Protein Homology CDS 11893 12807 . - 0 ID=cds-WP_059692100.1;Parent=gene-LDO45_RS01725;Dbxref=GenBank:WP_059692100.1;Name=WP_059692100.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530118.1;locus_tag=LDO45_RS01725;product=glutaminase;protein_id=WP_059692100.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 13032 13742 . + . ID=gene-LDO45_RS01730;Name=LDO45_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01730;old_locus_tag=BDI4_1040017 NZ_CAJZAS010000007.1 Protein Homology CDS 13032 13742 . + 0 ID=cds-WP_059526956.1;Parent=gene-LDO45_RS01730;Dbxref=GenBank:WP_059526956.1;Name=WP_059526956.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184573.1;locus_tag=LDO45_RS01730;product=response regulator;protein_id=WP_059526956.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 13807 14937 . + . ID=gene-LDO45_RS01735;Name=LDO45_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01735;old_locus_tag=BDI4_1040018 NZ_CAJZAS010000007.1 Protein Homology CDS 13807 14937 . + 0 ID=cds-WP_059692101.1;Parent=gene-LDO45_RS01735;Dbxref=GenBank:WP_059692101.1;Name=WP_059692101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880672.1;locus_tag=LDO45_RS01735;product=ATP-binding protein;protein_id=WP_059692101.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 14944 17364 . - . ID=gene-LDO45_RS01740;Name=LDO45_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01740;old_locus_tag=BDI4_1040019 NZ_CAJZAS010000007.1 Protein Homology CDS 14944 17364 . - 0 ID=cds-WP_223959286.1;Parent=gene-LDO45_RS01740;Dbxref=GenBank:WP_223959286.1;Name=WP_223959286.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480782.1;locus_tag=LDO45_RS01740;product=patatin-like phospholipase family protein;protein_id=WP_223959286.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 17636 18670 . + . ID=gene-LDO45_RS01745;Name=LDO45_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01745;old_locus_tag=BDI4_1040020 NZ_CAJZAS010000007.1 Protein Homology CDS 17636 18670 . + 0 ID=cds-WP_059526935.1;Parent=gene-LDO45_RS01745;Dbxref=GenBank:WP_059526935.1;Name=WP_059526935.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366613.1;locus_tag=LDO45_RS01745;product=rod shape-determining protein;protein_id=WP_059526935.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 18876 19535 . + . ID=gene-LDO45_RS01750;Name=LDO45_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01750;old_locus_tag=BDI4_1040021 NZ_CAJZAS010000007.1 Protein Homology CDS 18876 19535 . + 0 ID=cds-WP_223959287.1;Parent=gene-LDO45_RS01750;Dbxref=GenBank:WP_223959287.1;Name=WP_223959287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366612.1;locus_tag=LDO45_RS01750;product=YdcF family protein;protein_id=WP_223959287.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 20168 25771 . + . ID=gene-LDO45_RS01755;Name=LDO45_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01755;old_locus_tag=BDI4_1040023 NZ_CAJZAS010000007.1 Protein Homology CDS 20168 25771 . + 0 ID=cds-WP_223959312.1;Parent=gene-LDO45_RS01755;Dbxref=GenBank:WP_223959312.1;Name=WP_223959312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898672.1;locus_tag=LDO45_RS01755;product=autotransporter domain-containing protein;protein_id=WP_223959312.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 25927 28152 . + . ID=gene-LDO45_RS01760;Name=LDO45_RS01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01760;old_locus_tag=BDI4_1040024 NZ_CAJZAS010000007.1 Protein Homology CDS 25927 28152 . + 0 ID=cds-WP_059692193.1;Parent=gene-LDO45_RS01760;Dbxref=GenBank:WP_059692193.1;Name=WP_059692193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898673.1;locus_tag=LDO45_RS01760;product=amylo-alpha-1%2C6-glucosidase;protein_id=WP_059692193.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 28256 28507 . + . ID=gene-LDO45_RS01765;Name=LDO45_RS01765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01765;old_locus_tag=BDI4_1040025 NZ_CAJZAS010000007.1 Protein Homology CDS 28256 28507 . + 0 ID=cds-WP_059527240.1;Parent=gene-LDO45_RS01765;Dbxref=GenBank:WP_059527240.1;Name=WP_059527240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354368.1;locus_tag=LDO45_RS01765;product=hypothetical protein;protein_id=WP_059527240.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 29006 29896 . - . ID=gene-LDO45_RS01770;Name=penR;gbkey=Gene;gene=penR;gene_biotype=protein_coding;locus_tag=LDO45_RS01770;old_locus_tag=BDI4_1040026 NZ_CAJZAS010000007.1 Protein Homology CDS 29006 29896 . - 0 ID=cds-WP_223959314.1;Parent=gene-LDO45_RS01770;Dbxref=GenBank:WP_223959314.1;Name=WP_223959314.1;gbkey=CDS;gene=penR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017328746.1;locus_tag=LDO45_RS01770;product=beta-lactamase transcriptional regulator PenR;protein_id=WP_223959314.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 30012 30905 . + . ID=gene-LDO45_RS01775;Name=blaPEN-bcc;gbkey=Gene;gene=blaPEN-bcc;gene_biotype=protein_coding;locus_tag=LDO45_RS01775;old_locus_tag=BDI4_1040027 NZ_CAJZAS010000007.1 Protein Homology CDS 30012 30905 . + 0 ID=cds-WP_223959321.1;Parent=gene-LDO45_RS01775;Dbxref=GenBank:WP_223959321.1;Name=WP_223959321.1;Ontology_term=GO:0008800;gbkey=CDS;gene=blaPEN-bcc;go_function=beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659342.1;locus_tag=LDO45_RS01775;product=PEN family class A beta-lactamase%2C Bcc-type;protein_id=WP_223959321.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 31237 31437 . - . ID=gene-LDO45_RS01780;Name=LDO45_RS01780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01780;old_locus_tag=BDI4_1040028 NZ_CAJZAS010000007.1 Protein Homology CDS 31237 31437 . - 0 ID=cds-WP_059526917.1;Parent=gene-LDO45_RS01780;Dbxref=GenBank:WP_059526917.1;Name=WP_059526917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017328748.1;locus_tag=LDO45_RS01780;product=hypothetical protein;protein_id=WP_059526917.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 32224 33600 . - . ID=gene-LDO45_RS01790;Name=LDO45_RS01790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01790;old_locus_tag=BDI4_1040030 NZ_CAJZAS010000007.1 Protein Homology CDS 32224 33600 . - 0 ID=cds-WP_059692106.1;Parent=gene-LDO45_RS01790;Dbxref=GenBank:WP_059692106.1;Name=WP_059692106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412472.1;locus_tag=LDO45_RS01790;product=cell wall metabolism sensor histidine kinase WalK;protein_id=WP_059692106.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 33597 34259 . - . ID=gene-LDO45_RS01795;Name=LDO45_RS01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01795;old_locus_tag=BDI4_1040031 NZ_CAJZAS010000007.1 Protein Homology CDS 33597 34259 . - 0 ID=cds-WP_059692107.1;Parent=gene-LDO45_RS01795;Dbxref=GenBank:WP_059692107.1;Name=WP_059692107.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194706.1;locus_tag=LDO45_RS01795;product=response regulator;protein_id=WP_059692107.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 34487 34840 . + . ID=gene-LDO45_RS01800;Name=LDO45_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01800;old_locus_tag=BDI4_1040032 NZ_CAJZAS010000007.1 Protein Homology CDS 34487 34840 . + 0 ID=cds-WP_059526909.1;Parent=gene-LDO45_RS01800;Dbxref=GenBank:WP_059526909.1;Name=WP_059526909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753955.1;locus_tag=LDO45_RS01800;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_059526909.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 34904 35764 . + . ID=gene-LDO45_RS01805;Name=LDO45_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01805;old_locus_tag=BDI4_1040033 NZ_CAJZAS010000007.1 Protein Homology CDS 34904 35764 . + 0 ID=cds-WP_059526906.1;Parent=gene-LDO45_RS01805;Dbxref=GenBank:WP_059526906.1;Name=WP_059526906.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010108400.1;locus_tag=LDO45_RS01805;product=MurR/RpiR family transcriptional regulator;protein_id=WP_059526906.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 35900 36760 . + . ID=gene-LDO45_RS01810;Name=LDO45_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01810;old_locus_tag=BDI4_1040034 NZ_CAJZAS010000007.1 Protein Homology CDS 35900 36760 . + 0 ID=cds-WP_223959323.1;Parent=gene-LDO45_RS01810;Dbxref=GenBank:WP_223959323.1;Name=WP_223959323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898685.1;locus_tag=LDO45_RS01810;product=oxaloacetate decarboxylase;protein_id=WP_223959323.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 37094 37360 . + . ID=gene-LDO45_RS01815;Name=LDO45_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01815;old_locus_tag=BDI4_1040035 NZ_CAJZAS010000007.1 Protein Homology CDS 37094 37360 . + 0 ID=cds-WP_059526900.1;Parent=gene-LDO45_RS01815;Dbxref=GenBank:WP_059526900.1;Name=WP_059526900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396526.1;locus_tag=LDO45_RS01815;product=YodC family protein;protein_id=WP_059526900.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 37499 38665 . + . ID=gene-LDO45_RS01820;Name=LDO45_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01820;old_locus_tag=BDI4_1040036 NZ_CAJZAS010000007.1 Protein Homology CDS 37499 38665 . + 0 ID=cds-WP_223959332.1;Parent=gene-LDO45_RS01820;Dbxref=GenBank:WP_223959332.1;Name=WP_223959332.1;Ontology_term=GO:0004497,GO:0005506,GO:0016705,GO:0020037;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,iron ion binding|0005506||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216565.1;locus_tag=LDO45_RS01820;product=cytochrome P450;protein_id=WP_223959332.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 38684 39010 . - . ID=gene-LDO45_RS01825;Name=LDO45_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01825;old_locus_tag=BDI4_1040037 NZ_CAJZAS010000007.1 Protein Homology CDS 38684 39010 . - 0 ID=cds-WP_059526895.1;Parent=gene-LDO45_RS01825;Dbxref=GenBank:WP_059526895.1;Name=WP_059526895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480800.1;locus_tag=LDO45_RS01825;product=superinfection immunity protein;protein_id=WP_059526895.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 39101 39520 . - . ID=gene-LDO45_RS01830;Name=LDO45_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01830;old_locus_tag=BDI4_1040038 NZ_CAJZAS010000007.1 Protein Homology CDS 39101 39520 . - 0 ID=cds-WP_223959334.1;Parent=gene-LDO45_RS01830;Dbxref=GenBank:WP_223959334.1;Name=WP_223959334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366599.1;locus_tag=LDO45_RS01830;product=rhodanese-like domain-containing protein;protein_id=WP_223959334.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 39632 40606 . + . ID=gene-LDO45_RS01835;Name=ftrA;gbkey=Gene;gene=ftrA;gene_biotype=protein_coding;locus_tag=LDO45_RS01835;old_locus_tag=BDI4_1040039 NZ_CAJZAS010000007.1 Protein Homology CDS 39632 40606 . + 0 ID=cds-WP_059526889.1;Parent=gene-LDO45_RS01835;Dbxref=GenBank:WP_059526889.1;Name=WP_059526889.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=ftrA;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366598.1;locus_tag=LDO45_RS01835;product=transcriptional regulator FtrA;protein_id=WP_059526889.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 40778 41503 . + . ID=gene-LDO45_RS01840;Name=LDO45_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01840;old_locus_tag=BDI4_1040040 NZ_CAJZAS010000007.1 Protein Homology CDS 40778 41503 . + 0 ID=cds-WP_223959336.1;Parent=gene-LDO45_RS01840;Dbxref=GenBank:WP_223959336.1;Name=WP_223959336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758161.1;locus_tag=LDO45_RS01840;product=hypothetical protein;protein_id=WP_223959336.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 41570 43909 . - . ID=gene-LDO45_RS01845;Name=LDO45_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01845;old_locus_tag=BDI4_1040041 NZ_CAJZAS010000007.1 Protein Homology CDS 41570 43909 . - 0 ID=cds-WP_223959345.1;Parent=gene-LDO45_RS01845;Dbxref=GenBank:WP_223959345.1;Name=WP_223959345.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659330.1;locus_tag=LDO45_RS01845;product=Orn/Lys/Arg decarboxylase N-terminal domain-containing protein;protein_id=WP_223959345.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 43913 45439 . - . ID=gene-LDO45_RS01850;Name=adiC;gbkey=Gene;gene=adiC;gene_biotype=protein_coding;locus_tag=LDO45_RS01850;old_locus_tag=BDI4_1040042 NZ_CAJZAS010000007.1 Protein Homology CDS 43913 45439 . - 0 ID=cds-WP_223959347.1;Parent=gene-LDO45_RS01850;Dbxref=GenBank:WP_223959347.1;Name=WP_223959347.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=adiC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366594.1;locus_tag=LDO45_RS01850;product=arginine/agmatine antiporter;protein_id=WP_223959347.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 46047 47501 . + . ID=gene-LDO45_RS01855;Name=LDO45_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01855;old_locus_tag=BDI4_1040044 NZ_CAJZAS010000007.1 Protein Homology CDS 46047 47501 . + 0 ID=cds-WP_059819454.1;Parent=gene-LDO45_RS01855;Dbxref=GenBank:WP_059819454.1;Name=WP_059819454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757485.1;locus_tag=LDO45_RS01855;product=M20 family metallopeptidase;protein_id=WP_059819454.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 47577 48686 . + . ID=gene-LDO45_RS01860;Name=LDO45_RS01860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01860;old_locus_tag=BDI4_1040046 NZ_CAJZAS010000007.1 Protein Homology CDS 47577 48686 . + 0 ID=cds-WP_223959349.1;Parent=gene-LDO45_RS01860;Dbxref=GenBank:WP_223959349.1;Name=WP_223959349.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547244.1;locus_tag=LDO45_RS01860;product=malate/lactate/ureidoglycolate dehydrogenase;protein_id=WP_223959349.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 48683 49090 . + . ID=gene-LDO45_RS01865;Name=LDO45_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01865;old_locus_tag=BDI4_1040045 NZ_CAJZAS010000007.1 Protein Homology CDS 48683 49090 . + 0 ID=cds-WP_059527237.1;Parent=gene-LDO45_RS01865;Dbxref=GenBank:WP_059527237.1;Name=WP_059527237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751390.1;locus_tag=LDO45_RS01865;product=TfoX/Sxy family protein;protein_id=WP_059527237.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 49351 49929 . + . ID=gene-LDO45_RS01870;Name=LDO45_RS01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01870;old_locus_tag=BDI4_1040048 NZ_CAJZAS010000007.1 Protein Homology CDS 49351 49929 . + 0 ID=cds-WP_059526870.1;Parent=gene-LDO45_RS01870;Dbxref=GenBank:WP_059526870.1;Name=WP_059526870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354393.1;locus_tag=LDO45_RS01870;product=NnrU family protein;protein_id=WP_059526870.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 50087 50824 . - . ID=gene-LDO45_RS01875;Name=LDO45_RS01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01875;old_locus_tag=BDI4_1040049 NZ_CAJZAS010000007.1 Protein Homology CDS 50087 50824 . - 0 ID=cds-WP_223959351.1;Parent=gene-LDO45_RS01875;Dbxref=GenBank:WP_223959351.1;Name=WP_223959351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490854.1;locus_tag=LDO45_RS01875;product=sulfite exporter TauE/SafE family protein;protein_id=WP_223959351.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq pseudogene 51037 51303 . - . ID=gene-LDO45_RS01880;Name=LDO45_RS01880;end_range=51303,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS01880;old_locus_tag=BDI4_1040050;partial=true;pseudo=true NZ_CAJZAS010000007.1 Protein Homology CDS 51037 51303 . - 0 ID=cds-LDO45_RS01880;Parent=gene-LDO45_RS01880;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=51303,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339654.1;locus_tag=LDO45_RS01880;partial=true;product=DUF488 family protein;pseudo=true;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 51487 52776 . + . ID=gene-LDO45_RS01885;Name=LDO45_RS01885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01885;old_locus_tag=BDI4_1040051 NZ_CAJZAS010000007.1 Protein Homology CDS 51487 52776 . + 0 ID=cds-WP_223959353.1;Parent=gene-LDO45_RS01885;Dbxref=GenBank:WP_223959353.1;Name=WP_223959353.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751385.1;locus_tag=LDO45_RS01885;product=FAD-binding oxidoreductase;protein_id=WP_223959353.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 52793 53350 . + . ID=gene-LDO45_RS01890;Name=LDO45_RS01890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01890;old_locus_tag=BDI4_1040052 NZ_CAJZAS010000007.1 Protein Homology CDS 52793 53350 . + 0 ID=cds-WP_059526860.1;Parent=gene-LDO45_RS01890;Dbxref=GenBank:WP_059526860.1;Name=WP_059526860.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659265.1;locus_tag=LDO45_RS01890;product=helix-turn-helix domain-containing protein;protein_id=WP_059526860.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 53500 54846 . + . ID=gene-LDO45_RS01895;Name=LDO45_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01895;old_locus_tag=BDI4_1040053 NZ_CAJZAS010000007.1 Protein Homology CDS 53500 54846 . + 0 ID=cds-WP_223959355.1;Parent=gene-LDO45_RS01895;Dbxref=GenBank:WP_223959355.1;Name=WP_223959355.1;Ontology_term=GO:0006542,GO:0004356,GO:0005524;gbkey=CDS;go_function=glutamine synthetase activity|0004356||IEA,ATP binding|0005524||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216584.1;locus_tag=LDO45_RS01895;product=glutamine synthetase family protein;protein_id=WP_223959355.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 54913 55428 . - . ID=gene-LDO45_RS01900;Name=LDO45_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01900;old_locus_tag=BDI4_1040054 NZ_CAJZAS010000007.1 Protein Homology CDS 54913 55428 . - 0 ID=cds-WP_374109504.1;Parent=gene-LDO45_RS01900;Dbxref=GenBank:WP_374109504.1;Name=WP_374109504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354419.1;locus_tag=LDO45_RS01900;product=N-acetyltransferase family protein;protein_id=WP_374109504.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 55532 55921 . - . ID=gene-LDO45_RS01905;Name=LDO45_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01905;old_locus_tag=BDI4_1040055 NZ_CAJZAS010000007.1 Protein Homology CDS 55532 55921 . - 0 ID=cds-WP_059692116.1;Parent=gene-LDO45_RS01905;Dbxref=GenBank:WP_059692116.1;Name=WP_059692116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547257.1;locus_tag=LDO45_RS01905;product=lysozyme inhibitor LprI family protein;protein_id=WP_059692116.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 55973 56734 . - . ID=gene-LDO45_RS01910;Name=LDO45_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01910;old_locus_tag=BDI4_1040056 NZ_CAJZAS010000007.1 Protein Homology CDS 55973 56734 . - 0 ID=cds-WP_223959357.1;Parent=gene-LDO45_RS01910;Dbxref=GenBank:WP_223959357.1;Name=WP_223959357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659261.1;locus_tag=LDO45_RS01910;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_223959357.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 56980 57576 . + . ID=gene-LDO45_RS01915;Name=LDO45_RS01915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01915;old_locus_tag=BDI4_1040057 NZ_CAJZAS010000007.1 Protein Homology CDS 56980 57576 . + 0 ID=cds-WP_223959359.1;Parent=gene-LDO45_RS01915;Dbxref=GenBank:WP_223959359.1;Name=WP_223959359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013953351.1;locus_tag=LDO45_RS01915;product=DJ-1/PfpI family protein;protein_id=WP_223959359.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 57595 58047 . - . ID=gene-LDO45_RS01920;Name=LDO45_RS01920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01920;old_locus_tag=BDI4_1040058 NZ_CAJZAS010000007.1 Protein Homology CDS 57595 58047 . - 0 ID=cds-WP_059526845.1;Parent=gene-LDO45_RS01920;Dbxref=GenBank:WP_059526845.1;Name=WP_059526845.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898741.1;locus_tag=LDO45_RS01920;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_059526845.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 58233 59273 . + . ID=gene-LDO45_RS01925;Name=LDO45_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01925;old_locus_tag=BDI4_1040059 NZ_CAJZAS010000007.1 Protein Homology CDS 58233 59273 . + 0 ID=cds-WP_223959368.1;Parent=gene-LDO45_RS01925;Dbxref=GenBank:WP_223959368.1;Name=WP_223959368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366534.1;locus_tag=LDO45_RS01925;product=bifunctional nicotinamide-nucleotide adenylyltransferase/Nudix hydroxylase;protein_id=WP_223959368.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 59348 60781 . + . ID=gene-LDO45_RS01930;Name=LDO45_RS01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01930;old_locus_tag=BDI4_1040060 NZ_CAJZAS010000007.1 Protein Homology CDS 59348 60781 . + 0 ID=cds-WP_223959377.1;Parent=gene-LDO45_RS01930;Dbxref=GenBank:WP_223959377.1;Name=WP_223959377.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339667.1;locus_tag=LDO45_RS01930;product=nicotinate phosphoribosyltransferase;protein_id=WP_223959377.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 60824 62281 . - . ID=gene-LDO45_RS01935;Name=LDO45_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01935;old_locus_tag=BDI4_1040061 NZ_CAJZAS010000007.1 Protein Homology CDS 60824 62281 . - 0 ID=cds-WP_223959379.1;Parent=gene-LDO45_RS01935;Dbxref=GenBank:WP_223959379.1;Name=WP_223959379.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898744.1;locus_tag=LDO45_RS01935;product=PLP-dependent aminotransferase family protein;protein_id=WP_223959379.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 62408 63295 . + . ID=gene-LDO45_RS01940;Name=LDO45_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01940;old_locus_tag=BDI4_1040062 NZ_CAJZAS010000007.1 Protein Homology CDS 62408 63295 . + 0 ID=cds-WP_175911773.1;Parent=gene-LDO45_RS01940;Dbxref=GenBank:WP_175911773.1;Name=WP_175911773.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013592073.1;locus_tag=LDO45_RS01940;product=DMT family transporter;protein_id=WP_175911773.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 63368 63985 . - . ID=gene-LDO45_RS01945;Name=LDO45_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01945;old_locus_tag=BDI4_1040063 NZ_CAJZAS010000007.1 Protein Homology CDS 63368 63985 . - 0 ID=cds-WP_223959381.1;Parent=gene-LDO45_RS01945;Dbxref=GenBank:WP_223959381.1;Name=WP_223959381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898746.1;locus_tag=LDO45_RS01945;product=hypothetical protein;protein_id=WP_223959381.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 64056 64673 . - . ID=gene-LDO45_RS01950;Name=LDO45_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01950;old_locus_tag=BDI4_1040064 NZ_CAJZAS010000007.1 Protein Homology CDS 64056 64673 . - 0 ID=cds-WP_223959383.1;Parent=gene-LDO45_RS01950;Dbxref=GenBank:WP_223959383.1;Name=WP_223959383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017328804.1;locus_tag=LDO45_RS01950;product=hypothetical protein;protein_id=WP_223959383.1;transl_table=11 NZ_CAJZAS010000007.1 RefSeq gene 64678 64866 . + . ID=gene-LDO45_RS01955;Name=LDO45_RS01955;end_range=64866,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01955;partial=true NZ_CAJZAS010000007.1 GeneMarkS-2+ CDS 64678 64866 . + 0 ID=cds-WP_223959385.1;Parent=gene-LDO45_RS01955;Dbxref=GenBank:WP_223959385.1;Name=WP_223959385.1;end_range=64866,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS01955;partial=true;product=hypothetical protein;protein_id=WP_223959385.1;transl_table=11 ##sequence-region NZ_CAJZAS010000008.1 1 34276 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000008.1 RefSeq region 1 34276 . + . ID=NZ_CAJZAS010000008.1:1..34276;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_105 NZ_CAJZAS010000008.1 RefSeq pseudogene 1 746 . - . ID=gene-LDO45_RS01960;Name=LDO45_RS01960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS01960;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000008.1 Protein Homology CDS 1 746 . - 0 ID=cds-LDO45_RS01960;Parent=gene-LDO45_RS01960;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762416.1;locus_tag=LDO45_RS01960;partial=true;product=phosphodiesterase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 785 1816 . - . ID=gene-LDO45_RS01965;Name=LDO45_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01965;old_locus_tag=BDI4_1050003 NZ_CAJZAS010000008.1 Protein Homology CDS 785 1816 . - 0 ID=cds-WP_223959390.1;Parent=gene-LDO45_RS01965;Dbxref=GenBank:WP_223959390.1;Name=WP_223959390.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497656.1;locus_tag=LDO45_RS01965;product=ABC transporter ATP-binding protein;protein_id=WP_223959390.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 1841 2737 . - . ID=gene-LDO45_RS01970;Name=LDO45_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01970;old_locus_tag=BDI4_1050004 NZ_CAJZAS010000008.1 Protein Homology CDS 1841 2737 . - 0 ID=cds-WP_059691139.1;Parent=gene-LDO45_RS01970;Dbxref=GenBank:WP_059691139.1;Name=WP_059691139.1;Ontology_term=GO:0055085,GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0005886,GO:0055052;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755746.1;locus_tag=LDO45_RS01970;product=ABC transporter permease;protein_id=WP_059691139.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 2748 3572 . - . ID=gene-LDO45_RS01975;Name=LDO45_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01975;old_locus_tag=BDI4_1050005 NZ_CAJZAS010000008.1 Protein Homology CDS 2748 3572 . - 0 ID=cds-WP_223959392.1;Parent=gene-LDO45_RS01975;Dbxref=GenBank:WP_223959392.1;Name=WP_223959392.1;Ontology_term=GO:0055085,GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0005886,GO:0055052;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255790.1;locus_tag=LDO45_RS01975;product=ABC transporter permease;protein_id=WP_223959392.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 3589 4617 . - . ID=gene-LDO45_RS01980;Name=LDO45_RS01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01980;old_locus_tag=BDI4_1050006 NZ_CAJZAS010000008.1 Protein Homology CDS 3589 4617 . - 0 ID=cds-WP_223959395.1;Parent=gene-LDO45_RS01980;Dbxref=GenBank:WP_223959395.1;Name=WP_223959395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476396.1;locus_tag=LDO45_RS01980;product=ABC transporter substrate-binding protein;protein_id=WP_223959395.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 4682 5707 . - . ID=gene-LDO45_RS01985;Name=LDO45_RS01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01985;old_locus_tag=BDI4_1050007 NZ_CAJZAS010000008.1 Protein Homology CDS 4682 5707 . - 0 ID=cds-WP_059691141.1;Parent=gene-LDO45_RS01985;Dbxref=GenBank:WP_059691141.1;Name=WP_059691141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545033.1;locus_tag=LDO45_RS01985;product=substrate-binding domain-containing protein;protein_id=WP_059691141.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 6211 6456 . - . ID=gene-LDO45_RS01990;Name=LDO45_RS01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01990;old_locus_tag=BDI4_1050008 NZ_CAJZAS010000008.1 GeneMarkS-2+ CDS 6211 6456 . - 0 ID=cds-WP_223959397.1;Parent=gene-LDO45_RS01990;Dbxref=GenBank:WP_223959397.1;Name=WP_223959397.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS01990;product=hypothetical protein;protein_id=WP_223959397.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 6580 7137 . - . ID=gene-LDO45_RS01995;Name=LDO45_RS01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS01995;old_locus_tag=BDI4_1050009 NZ_CAJZAS010000008.1 GeneMarkS-2+ CDS 6580 7137 . - 0 ID=cds-WP_059691142.1;Parent=gene-LDO45_RS01995;Dbxref=GenBank:WP_059691142.1;Name=WP_059691142.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS01995;product=hypothetical protein;protein_id=WP_059691142.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 7575 8612 . + . ID=gene-LDO45_RS02000;Name=LDO45_RS02000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02000;old_locus_tag=BDI4_1050011 NZ_CAJZAS010000008.1 Protein Homology CDS 7575 8612 . + 0 ID=cds-WP_223959405.1;Parent=gene-LDO45_RS02000;Dbxref=GenBank:WP_223959405.1;Name=WP_223959405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372299.1;locus_tag=LDO45_RS02000;product=lipase family protein;protein_id=WP_223959405.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 8970 9596 . + . ID=gene-LDO45_RS02005;Name=LDO45_RS02005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02005;old_locus_tag=BDI4_1050012 NZ_CAJZAS010000008.1 Protein Homology CDS 8970 9596 . + 0 ID=cds-WP_223959457.1;Parent=gene-LDO45_RS02005;Dbxref=GenBank:WP_223959457.1;Name=WP_223959457.1;Ontology_term=GO:0010181,GO:0016646;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on the CH-NH group of donors%2C NAD or NADP as acceptor|0016646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476389.1;locus_tag=LDO45_RS02005;product=flavin reductase family protein;protein_id=WP_223959457.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 9946 11178 . + . ID=gene-LDO45_RS02010;Name=LDO45_RS02010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02010;old_locus_tag=BDI4_1050015 NZ_CAJZAS010000008.1 Protein Homology CDS 9946 11178 . + 0 ID=cds-WP_223959407.1;Parent=gene-LDO45_RS02010;Dbxref=GenBank:WP_223959407.1;Name=WP_223959407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760353.1;locus_tag=LDO45_RS02010;product=3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha;protein_id=WP_223959407.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 11181 12224 . + . ID=gene-LDO45_RS02015;Name=LDO45_RS02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02015;old_locus_tag=BDI4_1050014 NZ_CAJZAS010000008.1 Protein Homology CDS 11181 12224 . + 0 ID=cds-WP_223959409.1;Parent=gene-LDO45_RS02015;Dbxref=GenBank:WP_223959409.1;Name=WP_223959409.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010097186.1;locus_tag=LDO45_RS02015;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_223959409.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 12226 13563 . + . ID=gene-LDO45_RS02020;Name=LDO45_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02020;old_locus_tag=BDI4_1050016 NZ_CAJZAS010000008.1 Protein Homology CDS 12226 13563 . + 0 ID=cds-WP_223959410.1;Parent=gene-LDO45_RS02020;Dbxref=GenBank:WP_223959410.1;Name=WP_223959410.1;Ontology_term=GO:0006096;gbkey=CDS;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476386.1;locus_tag=LDO45_RS02020;product=dihydrolipoamide acetyltransferase family protein;protein_id=WP_223959410.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 13569 14960 . + . ID=gene-LDO45_RS02025;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=LDO45_RS02025;old_locus_tag=BDI4_1050017 NZ_CAJZAS010000008.1 Protein Homology CDS 13569 14960 . + 0 ID=cds-WP_223959418.1;Parent=gene-LDO45_RS02025;Dbxref=GenBank:WP_223959418.1;Name=WP_223959418.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481751.1;locus_tag=LDO45_RS02025;product=dihydrolipoyl dehydrogenase;protein_id=WP_223959418.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 15123 15752 . + . ID=gene-LDO45_RS02030;Name=LDO45_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02030;old_locus_tag=BDI4_1050018 NZ_CAJZAS010000008.1 Protein Homology CDS 15123 15752 . + 0 ID=cds-WP_223959420.1;Parent=gene-LDO45_RS02030;Dbxref=GenBank:WP_223959420.1;Name=WP_223959420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754000.1;locus_tag=LDO45_RS02030;product=NAD(P)H-binding protein;protein_id=WP_223959420.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 15885 16562 . + . ID=gene-LDO45_RS02035;Name=LDO45_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02035;old_locus_tag=BDI4_1050019 NZ_CAJZAS010000008.1 Protein Homology CDS 15885 16562 . + 0 ID=cds-WP_223959459.1;Parent=gene-LDO45_RS02035;Dbxref=GenBank:WP_223959459.1;Name=WP_223959459.1;Ontology_term=GO:0006974,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722789.1;locus_tag=LDO45_RS02035;product=SOS response-associated peptidase family protein;protein_id=WP_223959459.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 16878 18308 . + . ID=gene-LDO45_RS02040;Name=LDO45_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02040;old_locus_tag=BDI4_1050020 NZ_CAJZAS010000008.1 Protein Homology CDS 16878 18308 . + 0 ID=cds-WP_059523535.1;Parent=gene-LDO45_RS02040;Dbxref=GenBank:WP_059523535.1;Name=WP_059523535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656461.1;locus_tag=LDO45_RS02040;product=cytosine permease;protein_id=WP_059523535.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 18370 19575 . - . ID=gene-LDO45_RS02045;Name=LDO45_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02045;old_locus_tag=BDI4_1050022 NZ_CAJZAS010000008.1 Protein Homology CDS 18370 19575 . - 0 ID=cds-WP_223959422.1;Parent=gene-LDO45_RS02045;Dbxref=GenBank:WP_223959422.1;Name=WP_223959422.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363519.1;locus_tag=LDO45_RS02045;product=MFS transporter;protein_id=WP_223959422.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 20053 20964 . - . ID=gene-LDO45_RS02050;Name=LDO45_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02050;old_locus_tag=BDI4_1050025 NZ_CAJZAS010000008.1 Protein Homology CDS 20053 20964 . - 0 ID=cds-WP_059691149.1;Parent=gene-LDO45_RS02050;Dbxref=GenBank:WP_059691149.1;Name=WP_059691149.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753992.1;locus_tag=LDO45_RS02050;product=LysR family transcriptional regulator;protein_id=WP_059691149.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 21137 22057 . + . ID=gene-LDO45_RS02055;Name=LDO45_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02055;old_locus_tag=BDI4_1050026 NZ_CAJZAS010000008.1 Protein Homology CDS 21137 22057 . + 0 ID=cds-WP_059691150.1;Parent=gene-LDO45_RS02055;Dbxref=GenBank:WP_059691150.1;Name=WP_059691150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656468.1;locus_tag=LDO45_RS02055;product=pyridoxal-phosphate dependent enzyme;protein_id=WP_059691150.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 22332 23396 . - . ID=gene-LDO45_RS02060;Name=LDO45_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02060;old_locus_tag=BDI4_1050027 NZ_CAJZAS010000008.1 Protein Homology CDS 22332 23396 . - 0 ID=cds-WP_223959424.1;Parent=gene-LDO45_RS02060;Dbxref=GenBank:WP_223959424.1;Name=WP_223959424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545054.1;locus_tag=LDO45_RS02060;product=DUF2242 domain-containing protein;protein_id=WP_223959424.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 23526 24419 . - . ID=gene-LDO45_RS02065;Name=LDO45_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02065;old_locus_tag=BDI4_1050028 NZ_CAJZAS010000008.1 Protein Homology CDS 23526 24419 . - 0 ID=cds-WP_223959426.1;Parent=gene-LDO45_RS02065;Dbxref=GenBank:WP_223959426.1;Name=WP_223959426.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754558.1;locus_tag=LDO45_RS02065;product=LysR family transcriptional regulator;protein_id=WP_223959426.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 24529 25284 . + . ID=gene-LDO45_RS02070;Name=LDO45_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02070;old_locus_tag=BDI4_1050029 NZ_CAJZAS010000008.1 Protein Homology CDS 24529 25284 . + 0 ID=cds-WP_223959428.1;Parent=gene-LDO45_RS02070;Dbxref=GenBank:WP_223959428.1;Name=WP_223959428.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363524.1;locus_tag=LDO45_RS02070;product=TerC family protein;protein_id=WP_223959428.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 25345 25647 . + . ID=gene-LDO45_RS02075;Name=LDO45_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02075;old_locus_tag=BDI4_1050030 NZ_CAJZAS010000008.1 Protein Homology CDS 25345 25647 . + 0 ID=cds-WP_223959437.1;Parent=gene-LDO45_RS02075;Dbxref=GenBank:WP_223959437.1;Name=WP_223959437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328221.1;locus_tag=LDO45_RS02075;product=zf-TFIIB domain-containing protein;protein_id=WP_223959437.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 25756 26166 . - . ID=gene-LDO45_RS02080;Name=LDO45_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02080;old_locus_tag=BDI4_1050031 NZ_CAJZAS010000008.1 Protein Homology CDS 25756 26166 . - 0 ID=cds-WP_223959440.1;Parent=gene-LDO45_RS02080;Dbxref=GenBank:WP_223959440.1;Name=WP_223959440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328222.1;locus_tag=LDO45_RS02080;product=Hsp20/alpha crystallin family protein;protein_id=WP_223959440.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 26183 26623 . - . ID=gene-LDO45_RS02085;Name=LDO45_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02085;old_locus_tag=BDI4_1050032 NZ_CAJZAS010000008.1 Protein Homology CDS 26183 26623 . - 0 ID=cds-WP_059523516.1;Parent=gene-LDO45_RS02085;Dbxref=GenBank:WP_059523516.1;Name=WP_059523516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897461.1;locus_tag=LDO45_RS02085;product=Hsp20/alpha crystallin family protein;protein_id=WP_059523516.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 26869 27786 . + . ID=gene-LDO45_RS02090;Name=LDO45_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02090;old_locus_tag=BDI4_1050033 NZ_CAJZAS010000008.1 Protein Homology CDS 26869 27786 . + 0 ID=cds-WP_223959442.1;Parent=gene-LDO45_RS02090;Dbxref=GenBank:WP_223959442.1;Name=WP_223959442.1;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754563.1;locus_tag=LDO45_RS02090;product=3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein;protein_id=WP_223959442.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 27826 28104 . - . ID=gene-LDO45_RS02095;Name=LDO45_RS02095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02095;old_locus_tag=BDI4_1050034 NZ_CAJZAS010000008.1 Protein Homology CDS 27826 28104 . - 0 ID=cds-WP_059523512.1;Parent=gene-LDO45_RS02095;Dbxref=GenBank:WP_059523512.1;Name=WP_059523512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332742.1;locus_tag=LDO45_RS02095;product=DUF4148 domain-containing protein;protein_id=WP_059523512.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 28281 29129 . - . ID=gene-LDO45_RS02100;Name=LDO45_RS02100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02100;old_locus_tag=BDI4_1050035 NZ_CAJZAS010000008.1 Protein Homology CDS 28281 29129 . - 0 ID=cds-WP_039322076.1;Parent=gene-LDO45_RS02100;Dbxref=GenBank:WP_039322076.1;Name=WP_039322076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754565.1;locus_tag=LDO45_RS02100;product=LysR substrate-binding domain-containing protein;protein_id=WP_039322076.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 29463 29858 . + . ID=gene-LDO45_RS02105;Name=madL;gbkey=Gene;gene=madL;gene_biotype=protein_coding;locus_tag=LDO45_RS02105;old_locus_tag=BDI4_1050037 NZ_CAJZAS010000008.1 Protein Homology CDS 29463 29858 . + 0 ID=cds-WP_059449382.1;Parent=gene-LDO45_RS02105;Dbxref=GenBank:WP_059449382.1;Name=WP_059449382.1;Ontology_term=GO:0015849,GO:0005342;gbkey=CDS;gene=madL;go_function=organic acid transmembrane transporter activity|0005342||IEA;go_process=organic acid transport|0015849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897457.1;locus_tag=LDO45_RS02105;product=malonate transporter subunit MadL;protein_id=WP_059449382.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 29870 30637 . + . ID=gene-LDO45_RS02110;Name=madM;gbkey=Gene;gene=madM;gene_biotype=protein_coding;locus_tag=LDO45_RS02110;old_locus_tag=BDI4_1050036 NZ_CAJZAS010000008.1 Protein Homology CDS 29870 30637 . + 0 ID=cds-WP_059523510.1;Parent=gene-LDO45_RS02110;Dbxref=GenBank:WP_059523510.1;Name=WP_059523510.1;Ontology_term=GO:0044668;gbkey=CDS;gene=madM;go_function=sodium:malonate symporter activity|0044668||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363531.1;locus_tag=LDO45_RS02110;product=malonate transporter subunit MadM;protein_id=WP_059523510.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 30792 32438 . + . ID=gene-LDO45_RS02115;Name=mdcA;gbkey=Gene;gene=mdcA;gene_biotype=protein_coding;locus_tag=LDO45_RS02115;old_locus_tag=BDI4_1050038 NZ_CAJZAS010000008.1 Protein Homology CDS 30792 32438 . + 0 ID=cds-WP_059691157.1;Parent=gene-LDO45_RS02115;Dbxref=GenBank:WP_059691157.1;Name=WP_059691157.1;Ontology_term=GO:0006810,GO:0015451,GO:0016740;gbkey=CDS;gene=mdcA;go_function=decarboxylation-driven active transmembrane transporter activity|0015451||IEA,transferase activity|0016740||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764672.1;locus_tag=LDO45_RS02115;product=malonate decarboxylase subunit alpha;protein_id=WP_059691157.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 32449 32763 . + . ID=gene-LDO45_RS02120;Name=mdcC;gbkey=Gene;gene=mdcC;gene_biotype=protein_coding;locus_tag=LDO45_RS02120;old_locus_tag=BDI4_1050039 NZ_CAJZAS010000008.1 Protein Homology CDS 32449 32763 . + 0 ID=cds-WP_223959444.1;Parent=gene-LDO45_RS02120;Dbxref=GenBank:WP_223959444.1;Name=WP_223959444.1;gbkey=CDS;gene=mdcC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754569.1;locus_tag=LDO45_RS02120;product=malonate decarboxylase acyl carrier protein;protein_id=WP_223959444.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 32760 33695 . + . ID=gene-LDO45_RS02125;Name=LDO45_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02125;old_locus_tag=BDI4_1050040 NZ_CAJZAS010000008.1 Protein Homology CDS 32760 33695 . + 0 ID=cds-WP_223959446.1;Parent=gene-LDO45_RS02125;Dbxref=GenBank:WP_223959446.1;Name=WP_223959446.1;Ontology_term=GO:0005975,GO:0006633,GO:0003989,GO:0016831,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA,carboxy-lyase activity|0016831||IEA;go_process=carbohydrate metabolic process|0005975||IEA,fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497631.1;locus_tag=LDO45_RS02125;product=biotin-independent malonate decarboxylase subunit beta;protein_id=WP_223959446.1;transl_table=11 NZ_CAJZAS010000008.1 RefSeq gene 33682 34276 . + . ID=gene-LDO45_RS02130;Name=mdcE;end_range=34276,.;gbkey=Gene;gene=mdcE;gene_biotype=protein_coding;locus_tag=LDO45_RS02130;partial=true NZ_CAJZAS010000008.1 Protein Homology CDS 33682 34276 . + 0 ID=cds-WP_223959455.1;Parent=gene-LDO45_RS02130;Dbxref=GenBank:WP_223959455.1;Name=WP_223959455.1;Ontology_term=GO:0005975;end_range=34276,.;gbkey=CDS;gene=mdcE;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722800.1;locus_tag=LDO45_RS02130;partial=true;product=biotin-independent malonate decarboxylase subunit gamma;protein_id=WP_223959455.1;transl_table=11 ##sequence-region NZ_CAJZAS010000009.1 1 74994 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000009.1 RefSeq region 1 74994 . + . ID=NZ_CAJZAS010000009.1:1..74994;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_106 NZ_CAJZAS010000009.1 RefSeq gene 1 220 . + . ID=gene-LDO45_RS02135;Name=LDO45_RS02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02135;old_locus_tag=BDI4_1060001;partial=true;start_range=.,1 NZ_CAJZAS010000009.1 GeneMarkS-2+ CDS 1 220 . + 1 ID=cds-WP_223959461.1;Parent=gene-LDO45_RS02135;Dbxref=GenBank:WP_223959461.1;Name=WP_223959461.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS02135;partial=true;product=hypothetical protein;protein_id=WP_223959461.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 192 1352 . - . ID=gene-LDO45_RS02140;Name=LDO45_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02140;old_locus_tag=BDI4_1060002 NZ_CAJZAS010000009.1 Protein Homology CDS 192 1352 . - 0 ID=cds-WP_223959463.1;Parent=gene-LDO45_RS02140;Dbxref=GenBank:WP_223959463.1;Name=WP_223959463.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356019.1;locus_tag=LDO45_RS02140;product=porin;protein_id=WP_223959463.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 1599 1943 . + . ID=gene-LDO45_RS02145;Name=LDO45_RS02145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02145;old_locus_tag=BDI4_1060003 NZ_CAJZAS010000009.1 Protein Homology CDS 1599 1943 . + 0 ID=cds-WP_223959574.1;Parent=gene-LDO45_RS02145;Dbxref=GenBank:WP_223959574.1;Name=WP_223959574.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025045.5;locus_tag=LDO45_RS02145;product=DUF4148 domain-containing protein;protein_id=WP_223959574.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 1977 2474 . + . ID=gene-LDO45_RS02150;Name=LDO45_RS02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02150;old_locus_tag=BDI4_1060004 NZ_CAJZAS010000009.1 Protein Homology CDS 1977 2474 . + 0 ID=cds-WP_223959465.1;Parent=gene-LDO45_RS02150;Dbxref=GenBank:WP_223959465.1;Name=WP_223959465.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009693532.1;locus_tag=LDO45_RS02150;product=hypothetical protein;protein_id=WP_223959465.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 2474 2599 . + . ID=gene-LDO45_RS34165;Name=LDO45_RS34165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34165 NZ_CAJZAS010000009.1 GeneMarkS-2+ CDS 2474 2599 . + 0 ID=cds-WP_290370985.1;Parent=gene-LDO45_RS34165;Dbxref=GenBank:WP_290370985.1;Name=WP_290370985.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34165;product=hypothetical protein;protein_id=WP_290370985.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 2635 3930 . - . ID=gene-LDO45_RS02155;Name=LDO45_RS02155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02155;old_locus_tag=BDI4_1060005 NZ_CAJZAS010000009.1 Protein Homology CDS 2635 3930 . - 0 ID=cds-WP_059531860.1;Parent=gene-LDO45_RS02155;Dbxref=GenBank:WP_059531860.1;Name=WP_059531860.1;Ontology_term=GO:0019346,GO:0016765,GO:0030170;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017685418.1;locus_tag=LDO45_RS02155;product=O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein;protein_id=WP_059531860.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 4119 5342 . - . ID=gene-LDO45_RS02160;Name=LDO45_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02160;old_locus_tag=BDI4_1060006 NZ_CAJZAS010000009.1 Protein Homology CDS 4119 5342 . - 0 ID=cds-WP_223959467.1;Parent=gene-LDO45_RS02160;Dbxref=GenBank:WP_223959467.1;Name=WP_223959467.1;Ontology_term=GO:0006396,GO:0008452;gbkey=CDS;go_function=RNA ligase activity|0008452||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660348.1;locus_tag=LDO45_RS02160;product=RtcB family protein;protein_id=WP_223959467.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 5393 6154 . - . ID=gene-LDO45_RS02165;Name=LDO45_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02165;old_locus_tag=BDI4_1060007 NZ_CAJZAS010000009.1 Protein Homology CDS 5393 6154 . - 0 ID=cds-WP_223959469.1;Parent=gene-LDO45_RS02165;Dbxref=GenBank:WP_223959469.1;Name=WP_223959469.1;Ontology_term=GO:0006744,GO:0032259,GO:0008425,GO:0061542,GO:0102208;gbkey=CDS;go_function=2-polyprenyl-6-methoxy-1%2C4-benzoquinone methyltransferase activity|0008425||IEA,3-demethylubiquinol-n 3-O-methyltransferase activity|0061542||IEA,2-polyprenyl-6-hydroxyphenol methylase activity|0102208||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766900.1;locus_tag=LDO45_RS02165;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_223959469.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 6169 6795 . - . ID=gene-LDO45_RS02170;Name=LDO45_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02170;old_locus_tag=BDI4_1060008 NZ_CAJZAS010000009.1 Protein Homology CDS 6169 6795 . - 0 ID=cds-WP_059531846.1;Parent=gene-LDO45_RS02170;Dbxref=GenBank:WP_059531846.1;Name=WP_059531846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355998.1;locus_tag=LDO45_RS02170;product=LysE family translocator;protein_id=WP_059531846.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq pseudogene 6923 7108 . - . ID=gene-LDO45_RS34170;Name=LDO45_RS34170;end_range=7108,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34170;partial=true;pseudo=true NZ_CAJZAS010000009.1 Protein Homology CDS 6923 7108 . - 0 ID=cds-LDO45_RS34170;Parent=gene-LDO45_RS34170;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=7108,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397928.1;locus_tag=LDO45_RS34170;partial=true;product=LysR substrate-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 7564 8361 . + . ID=gene-LDO45_RS02180;Name=LDO45_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02180;old_locus_tag=BDI4_1060011 NZ_CAJZAS010000009.1 Protein Homology CDS 7564 8361 . + 0 ID=cds-WP_223959470.1;Parent=gene-LDO45_RS02180;Dbxref=GenBank:WP_223959470.1;Name=WP_223959470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413074.1;locus_tag=LDO45_RS02180;product=hypothetical protein;protein_id=WP_223959470.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 8476 9813 . - . ID=gene-LDO45_RS02185;Name=argG;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=LDO45_RS02185;old_locus_tag=BDI4_1060012 NZ_CAJZAS010000009.1 Protein Homology CDS 8476 9813 . - 0 ID=cds-WP_059531840.1;Parent=gene-LDO45_RS02185;Dbxref=GenBank:WP_059531840.1;Name=WP_059531840.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524,GO:0042803;gbkey=CDS;gene=argG;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881448.1;locus_tag=LDO45_RS02185;product=argininosuccinate synthase;protein_id=WP_059531840.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 10143 11213 . - . ID=gene-LDO45_RS02190;Name=LDO45_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02190;old_locus_tag=BDI4_1060013 NZ_CAJZAS010000009.1 Protein Homology CDS 10143 11213 . - 0 ID=cds-WP_059699764.1;Parent=gene-LDO45_RS02190;Dbxref=GenBank:WP_059699764.1;Name=WP_059699764.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202241.1;locus_tag=LDO45_RS02190;product=FUSC family protein;protein_id=WP_059699764.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 11359 12891 . - . ID=gene-LDO45_RS02195;Name=LDO45_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02195;old_locus_tag=BDI4_1060014 NZ_CAJZAS010000009.1 Protein Homology CDS 11359 12891 . - 0 ID=cds-WP_059531833.1;Parent=gene-LDO45_RS02195;Dbxref=GenBank:WP_059531833.1;Name=WP_059531833.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397946.1;locus_tag=LDO45_RS02195;product=diguanylate cyclase;protein_id=WP_059531833.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 13489 15024 . + . ID=gene-LDO45_RS02200;Name=LDO45_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02200;old_locus_tag=BDI4_1060015 NZ_CAJZAS010000009.1 Protein Homology CDS 13489 15024 . + 0 ID=cds-WP_059531830.1;Parent=gene-LDO45_RS02200;Dbxref=GenBank:WP_059531830.1;Name=WP_059531830.1;Ontology_term=GO:0006865;gbkey=CDS;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496062.1;locus_tag=LDO45_RS02200;product=amino acid permease;protein_id=WP_059531830.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 15288 15533 . + . ID=gene-LDO45_RS02205;Name=LDO45_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02205;old_locus_tag=BDI4_1060016 NZ_CAJZAS010000009.1 Protein Homology CDS 15288 15533 . + 0 ID=cds-WP_006761486.1;Parent=gene-LDO45_RS02205;Dbxref=GenBank:WP_006761486.1;Name=WP_006761486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750807.1;locus_tag=LDO45_RS02205;product=DUF3717 domain-containing protein;protein_id=WP_006761486.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 15773 16690 . + . ID=gene-LDO45_RS02210;Name=LDO45_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02210;old_locus_tag=BDI4_1060017 NZ_CAJZAS010000009.1 Protein Homology CDS 15773 16690 . + 0 ID=cds-WP_059448822.1;Parent=gene-LDO45_RS02210;Dbxref=GenBank:WP_059448822.1;Name=WP_059448822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355987.1;locus_tag=LDO45_RS02210;product=LysR family transcriptional regulator;protein_id=WP_059448822.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 16803 17615 . + . ID=gene-LDO45_RS02215;Name=LDO45_RS02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02215;old_locus_tag=BDI4_1060018 NZ_CAJZAS010000009.1 Protein Homology CDS 16803 17615 . + 0 ID=cds-WP_223959472.1;Parent=gene-LDO45_RS02215;Dbxref=GenBank:WP_223959472.1;Name=WP_223959472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493775.1;locus_tag=LDO45_RS02215;product=alpha/beta fold hydrolase;protein_id=WP_223959472.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 17667 18020 . - . ID=gene-LDO45_RS02220;Name=LDO45_RS02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02220;old_locus_tag=BDI4_1060019 NZ_CAJZAS010000009.1 Protein Homology CDS 17667 18020 . - 0 ID=cds-WP_059531827.1;Parent=gene-LDO45_RS02220;Dbxref=GenBank:WP_059531827.1;Name=WP_059531827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355985.1;locus_tag=LDO45_RS02220;product=hypothetical protein;protein_id=WP_059531827.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 18273 18893 . - . ID=gene-LDO45_RS02225;Name=LDO45_RS02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02225;old_locus_tag=BDI4_1060020 NZ_CAJZAS010000009.1 Protein Homology CDS 18273 18893 . - 0 ID=cds-WP_223959475.1;Parent=gene-LDO45_RS02225;Dbxref=GenBank:WP_223959475.1;Name=WP_223959475.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330350.1;locus_tag=LDO45_RS02225;product=TetR/AcrR family transcriptional regulator;protein_id=WP_223959475.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 18988 20229 . + . ID=gene-LDO45_RS02230;Name=LDO45_RS02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02230;old_locus_tag=BDI4_1060021 NZ_CAJZAS010000009.1 Protein Homology CDS 18988 20229 . + 0 ID=cds-WP_223959490.1;Parent=gene-LDO45_RS02230;Dbxref=GenBank:WP_223959490.1;Name=WP_223959490.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548285.1;locus_tag=LDO45_RS02230;product=glycosyltransferase;protein_id=WP_223959490.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 20246 20941 . - . ID=gene-LDO45_RS02235;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=LDO45_RS02235;old_locus_tag=BDI4_1060022 NZ_CAJZAS010000009.1 Protein Homology CDS 20246 20941 . - 0 ID=cds-WP_059466626.1;Parent=gene-LDO45_RS02235;Dbxref=GenBank:WP_059466626.1;Name=WP_059466626.1;Ontology_term=GO:0006355,GO:0006547,GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-histidine metabolic process|0006547||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900192.1;locus_tag=LDO45_RS02235;product=histidine utilization repressor;protein_id=WP_059466626.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 21438 22211 . + . ID=gene-LDO45_RS02240;Name=LDO45_RS02240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02240;old_locus_tag=BDI4_1060023 NZ_CAJZAS010000009.1 Protein Homology CDS 21438 22211 . + 0 ID=cds-WP_059531821.1;Parent=gene-LDO45_RS02240;Dbxref=GenBank:WP_059531821.1;Name=WP_059531821.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482536.1;locus_tag=LDO45_RS02240;product=ABC transporter substrate-binding protein;protein_id=WP_059531821.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 22387 23076 . + . ID=gene-LDO45_RS02245;Name=LDO45_RS02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02245;old_locus_tag=BDI4_1060024 NZ_CAJZAS010000009.1 Protein Homology CDS 22387 23076 . + 0 ID=cds-WP_059531818.1;Parent=gene-LDO45_RS02245;Dbxref=GenBank:WP_059531818.1;Name=WP_059531818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527442.1;locus_tag=LDO45_RS02245;product=ABC transporter permease;protein_id=WP_059531818.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 23073 23786 . + . ID=gene-LDO45_RS02250;Name=LDO45_RS02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02250;old_locus_tag=BDI4_1060025 NZ_CAJZAS010000009.1 Protein Homology CDS 23073 23786 . + 0 ID=cds-WP_059531814.1;Parent=gene-LDO45_RS02250;Dbxref=GenBank:WP_059531814.1;Name=WP_059531814.1;Ontology_term=GO:0022857,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482521.1;locus_tag=LDO45_RS02250;product=ABC transporter permease;protein_id=WP_059531814.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 23820 24587 . + . ID=gene-LDO45_RS02255;Name=LDO45_RS02255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02255;old_locus_tag=BDI4_1060026 NZ_CAJZAS010000009.1 Protein Homology CDS 23820 24587 . + 0 ID=cds-WP_059511632.1;Parent=gene-LDO45_RS02255;Dbxref=GenBank:WP_059511632.1;Name=WP_059511632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330339.1;locus_tag=LDO45_RS02255;product=ABC transporter ATP-binding protein;protein_id=WP_059511632.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 24657 25091 . + . ID=gene-LDO45_RS02260;Name=LDO45_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02260;old_locus_tag=BDI4_1060027 NZ_CAJZAS010000009.1 Protein Homology CDS 24657 25091 . + 0 ID=cds-WP_059531811.1;Parent=gene-LDO45_RS02260;Dbxref=GenBank:WP_059531811.1;Name=WP_059531811.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355960.1;locus_tag=LDO45_RS02260;product=cupin domain-containing protein;protein_id=WP_059531811.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 25362 25499 . + . ID=gene-LDO45_RS02265;Name=LDO45_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02265 NZ_CAJZAS010000009.1 Protein Homology CDS 25362 25499 . + 0 ID=cds-WP_167359252.1;Parent=gene-LDO45_RS02265;Dbxref=GenBank:WP_167359252.1;Name=WP_167359252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365487.1;locus_tag=LDO45_RS02265;product=HHHH-motif protein;protein_id=WP_167359252.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 25568 26035 . + . ID=gene-LDO45_RS02270;Name=LDO45_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02270;old_locus_tag=BDI4_1060028 NZ_CAJZAS010000009.1 Protein Homology CDS 25568 26035 . + 0 ID=cds-WP_223959492.1;Parent=gene-LDO45_RS02270;Dbxref=GenBank:WP_223959492.1;Name=WP_223959492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338550.1;locus_tag=LDO45_RS02270;product=hypothetical protein;protein_id=WP_223959492.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 26159 27517 . - . ID=gene-LDO45_RS02275;Name=LDO45_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02275;old_locus_tag=BDI4_1060029 NZ_CAJZAS010000009.1 Protein Homology CDS 26159 27517 . - 0 ID=cds-WP_223959495.1;Parent=gene-LDO45_RS02275;Dbxref=GenBank:WP_223959495.1;Name=WP_223959495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496047.1;locus_tag=LDO45_RS02275;product=polyhydroxyalkanoate depolymerase;protein_id=WP_223959495.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 27821 28483 . + . ID=gene-LDO45_RS02280;Name=LDO45_RS02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02280;old_locus_tag=BDI4_1060030 NZ_CAJZAS010000009.1 Protein Homology CDS 27821 28483 . + 0 ID=cds-WP_059700556.1;Parent=gene-LDO45_RS02280;Dbxref=GenBank:WP_059700556.1;Name=WP_059700556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752610.1;locus_tag=LDO45_RS02280;product=glutathione S-transferase family protein;protein_id=WP_059700556.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 28719 29966 . + . ID=gene-LDO45_RS02285;Name=LDO45_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02285;old_locus_tag=BDI4_1060031 NZ_CAJZAS010000009.1 Protein Homology CDS 28719 29966 . + 0 ID=cds-WP_223959503.1;Parent=gene-LDO45_RS02285;Dbxref=GenBank:WP_223959503.1;Name=WP_223959503.1;Ontology_term=GO:0006355,GO:0003700,GO:0030552;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,cAMP binding|0030552||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338548.1;locus_tag=LDO45_RS02285;product=Crp/Fnr family transcriptional regulator;protein_id=WP_223959503.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 29990 30754 . + . ID=gene-LDO45_RS02290;Name=LDO45_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02290;old_locus_tag=BDI4_1060032 NZ_CAJZAS010000009.1 Protein Homology CDS 29990 30754 . + 0 ID=cds-WP_059531800.1;Parent=gene-LDO45_RS02290;Dbxref=GenBank:WP_059531800.1;Name=WP_059531800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397961.1;locus_tag=LDO45_RS02290;product=flagellar motor protein;protein_id=WP_059531800.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 30773 31450 . + . ID=gene-LDO45_RS02295;Name=LDO45_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02295;old_locus_tag=BDI4_1060033 NZ_CAJZAS010000009.1 Protein Homology CDS 30773 31450 . + 0 ID=cds-WP_223959505.1;Parent=gene-LDO45_RS02295;Dbxref=GenBank:WP_223959505.1;Name=WP_223959505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338547.1;locus_tag=LDO45_RS02295;product=OmpA family protein;protein_id=WP_223959505.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 31600 33462 . + . ID=gene-LDO45_RS02300;Name=LDO45_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02300;old_locus_tag=BDI4_1060034 NZ_CAJZAS010000009.1 Protein Homology CDS 31600 33462 . + 0 ID=cds-WP_223959507.1;Parent=gene-LDO45_RS02300;Dbxref=GenBank:WP_223959507.1;Name=WP_223959507.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217528.1;locus_tag=LDO45_RS02300;product=methyl-accepting chemotaxis protein;protein_id=WP_223959507.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 33564 34352 . + . ID=gene-LDO45_RS02305;Name=LDO45_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02305;old_locus_tag=BDI4_1060035 NZ_CAJZAS010000009.1 Protein Homology CDS 33564 34352 . + 0 ID=cds-WP_059689478.1;Parent=gene-LDO45_RS02305;Dbxref=GenBank:WP_059689478.1;Name=WP_059689478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365495.1;locus_tag=LDO45_RS02305;product=hypothetical protein;protein_id=WP_059689478.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 34391 35608 . - . ID=gene-LDO45_RS02310;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=LDO45_RS02310;old_locus_tag=BDI4_1060036 NZ_CAJZAS010000009.1 Protein Homology CDS 34391 35608 . - 0 ID=cds-WP_223959515.1;Parent=gene-LDO45_RS02310;Dbxref=GenBank:WP_223959515.1;Name=WP_223959515.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476298.1;locus_tag=LDO45_RS02310;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_223959515.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 36852 38387 . + . ID=gene-LDO45_RS02315;Name=LDO45_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02315;old_locus_tag=BDI4_1060037 NZ_CAJZAS010000009.1 Protein Homology CDS 36852 38387 . + 0 ID=cds-WP_223959518.1;Parent=gene-LDO45_RS02315;Dbxref=GenBank:WP_223959518.1;Name=WP_223959518.1;Ontology_term=GO:0006486,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=protein glycosylation|0006486||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660389.1;locus_tag=LDO45_RS02315;product=glycosyltransferase family 2 protein;protein_id=WP_223959518.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 38391 39386 . + . ID=gene-LDO45_RS02320;Name=LDO45_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02320;old_locus_tag=BDI4_1060038 NZ_CAJZAS010000009.1 Protein Homology CDS 38391 39386 . + 0 ID=cds-WP_223959520.1;Parent=gene-LDO45_RS02320;Dbxref=GenBank:WP_223959520.1;Name=WP_223959520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328268.1;locus_tag=LDO45_RS02320;product=polymer-forming cytoskeletal protein;protein_id=WP_223959520.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 39398 40414 . + . ID=gene-LDO45_RS02325;Name=LDO45_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02325;old_locus_tag=BDI4_1060039 NZ_CAJZAS010000009.1 Protein Homology CDS 39398 40414 . + 0 ID=cds-WP_059531781.1;Parent=gene-LDO45_RS02325;Dbxref=GenBank:WP_059531781.1;Name=WP_059531781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545114.1;locus_tag=LDO45_RS02325;product=YaiO family outer membrane beta-barrel protein;protein_id=WP_059531781.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 40429 41199 . + . ID=gene-LDO45_RS02330;Name=LDO45_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02330;old_locus_tag=BDI4_1060040 NZ_CAJZAS010000009.1 Protein Homology CDS 40429 41199 . + 0 ID=cds-WP_223959524.1;Parent=gene-LDO45_RS02330;Dbxref=GenBank:WP_223959524.1;Name=WP_223959524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490531.1;locus_tag=LDO45_RS02330;product=hypothetical protein;protein_id=WP_223959524.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 41497 43650 . + . ID=gene-LDO45_RS02335;Name=LDO45_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02335;old_locus_tag=BDI4_1060042 NZ_CAJZAS010000009.1 Protein Homology CDS 41497 43650 . + 0 ID=cds-WP_223959526.1;Parent=gene-LDO45_RS02335;Dbxref=GenBank:WP_223959526.1;Name=WP_223959526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545112.1;locus_tag=LDO45_RS02335;product=hypothetical protein;protein_id=WP_223959526.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 43743 44831 . + . ID=gene-LDO45_RS02340;Name=LDO45_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02340;old_locus_tag=BDI4_1060043 NZ_CAJZAS010000009.1 Protein Homology CDS 43743 44831 . + 0 ID=cds-WP_059699783.1;Parent=gene-LDO45_RS02340;Dbxref=GenBank:WP_059699783.1;Name=WP_059699783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497593.1;locus_tag=LDO45_RS02340;product=hypothetical protein;protein_id=WP_059699783.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 44879 46696 . + . ID=gene-LDO45_RS02345;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LDO45_RS02345;old_locus_tag=BDI4_1060044 NZ_CAJZAS010000009.1 Protein Homology CDS 44879 46696 . + 0 ID=cds-WP_059531768.1;Parent=gene-LDO45_RS02345;Dbxref=GenBank:WP_059531768.1;Name=WP_059531768.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004549145.1;locus_tag=LDO45_RS02345;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_059531768.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 46857 47354 . - . ID=gene-LDO45_RS02350;Name=LDO45_RS02350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02350;old_locus_tag=BDI4_1060045 NZ_CAJZAS010000009.1 Protein Homology CDS 46857 47354 . - 0 ID=cds-WP_059689484.1;Parent=gene-LDO45_RS02350;Dbxref=GenBank:WP_059689484.1;Name=WP_059689484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601221.1;locus_tag=LDO45_RS02350;product=TPM domain-containing protein;protein_id=WP_059689484.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 47357 48190 . - . ID=gene-LDO45_RS02355;Name=LDO45_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02355;old_locus_tag=BDI4_1060046 NZ_CAJZAS010000009.1 Protein Homology CDS 47357 48190 . - 0 ID=cds-WP_223959592.1;Parent=gene-LDO45_RS02355;Dbxref=GenBank:WP_223959592.1;Name=WP_223959592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365292.1;locus_tag=LDO45_RS02355;product=YgcG family protein;protein_id=WP_223959592.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 48208 48870 . - . ID=gene-LDO45_RS02360;Name=LDO45_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02360;old_locus_tag=BDI4_1060047 NZ_CAJZAS010000009.1 Protein Homology CDS 48208 48870 . - 0 ID=cds-WP_223959528.1;Parent=gene-LDO45_RS02360;Dbxref=GenBank:WP_223959528.1;Name=WP_223959528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365291.1;locus_tag=LDO45_RS02360;product=LemA family protein;protein_id=WP_223959528.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 49358 49612 . + . ID=gene-LDO45_RS02365;Name=LDO45_RS02365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02365;old_locus_tag=BDI4_1060048 NZ_CAJZAS010000009.1 Protein Homology CDS 49358 49612 . + 0 ID=cds-WP_082721894.1;Parent=gene-LDO45_RS02365;Dbxref=GenBank:WP_082721894.1;Name=WP_082721894.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023095.5;locus_tag=LDO45_RS02365;product=DUF2933 domain-containing protein;protein_id=WP_082721894.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 49596 50252 . + . ID=gene-LDO45_RS02370;Name=LDO45_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02370;old_locus_tag=BDI4_1060049 NZ_CAJZAS010000009.1 Protein Homology CDS 49596 50252 . + 0 ID=cds-WP_059699793.1;Parent=gene-LDO45_RS02370;Dbxref=GenBank:WP_059699793.1;Name=WP_059699793.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007828363.1;locus_tag=LDO45_RS02370;product=isoprenylcysteine carboxylmethyltransferase family protein;protein_id=WP_059699793.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 50325 50591 . + . ID=gene-LDO45_RS02375;Name=LDO45_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02375;old_locus_tag=BDI4_1060050 NZ_CAJZAS010000009.1 Protein Homology CDS 50325 50591 . + 0 ID=cds-WP_223959530.1;Parent=gene-LDO45_RS02375;Dbxref=GenBank:WP_223959530.1;Name=WP_223959530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008647609.1;locus_tag=LDO45_RS02375;product=DUF5676 family membrane protein;protein_id=WP_223959530.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 50811 53258 . + . ID=gene-LDO45_RS02380;Name=LDO45_RS02380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02380;old_locus_tag=BDI4_1060051 NZ_CAJZAS010000009.1 Protein Homology CDS 50811 53258 . + 0 ID=cds-WP_223959532.1;Parent=gene-LDO45_RS02380;Dbxref=GenBank:WP_223959532.1;Name=WP_223959532.1;Ontology_term=GO:0006812,GO:0042625,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled ion transmembrane transporter activity|0042625||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008919990.1;locus_tag=LDO45_RS02380;product=heavy metal translocating P-type ATPase;protein_id=WP_223959532.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 53650 54060 . + . ID=gene-LDO45_RS02385;Name=LDO45_RS02385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02385;old_locus_tag=BDI4_1060052 NZ_CAJZAS010000009.1 Protein Homology CDS 53650 54060 . + 0 ID=cds-WP_223959595.1;Parent=gene-LDO45_RS02385;Dbxref=GenBank:WP_223959595.1;Name=WP_223959595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365505.1;locus_tag=LDO45_RS02385;product=TIGR02594 family protein;protein_id=WP_223959595.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 54124 55566 . - . ID=gene-LDO45_RS02390;Name=LDO45_RS02390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02390;old_locus_tag=BDI4_1060053 NZ_CAJZAS010000009.1 Protein Homology CDS 54124 55566 . - 0 ID=cds-WP_223959542.1;Parent=gene-LDO45_RS02390;Dbxref=GenBank:WP_223959542.1;Name=WP_223959542.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479568.1;locus_tag=LDO45_RS02390;product=efflux transporter outer membrane subunit;protein_id=WP_223959542.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 55583 57157 . - . ID=gene-LDO45_RS02395;Name=LDO45_RS02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02395;old_locus_tag=BDI4_1060054 NZ_CAJZAS010000009.1 Protein Homology CDS 55583 57157 . - 0 ID=cds-WP_059531747.1;Parent=gene-LDO45_RS02395;Dbxref=GenBank:WP_059531747.1;Name=WP_059531747.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338532.1;locus_tag=LDO45_RS02395;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_059531747.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 57171 58262 . - . ID=gene-LDO45_RS02400;Name=LDO45_RS02400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02400;old_locus_tag=BDI4_1060055 NZ_CAJZAS010000009.1 Protein Homology CDS 57171 58262 . - 0 ID=cds-WP_059689492.1;Parent=gene-LDO45_RS02400;Dbxref=GenBank:WP_059689492.1;Name=WP_059689492.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750286.1;locus_tag=LDO45_RS02400;product=HlyD family secretion protein;protein_id=WP_059689492.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 58327 58758 . - . ID=gene-LDO45_RS02405;Name=LDO45_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02405;old_locus_tag=BDI4_1060056 NZ_CAJZAS010000009.1 Protein Homology CDS 58327 58758 . - 0 ID=cds-WP_059531741.1;Parent=gene-LDO45_RS02405;Dbxref=GenBank:WP_059531741.1;Name=WP_059531741.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496031.1;locus_tag=LDO45_RS02405;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_059531741.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 58866 59786 . - . ID=gene-LDO45_RS02410;Name=LDO45_RS02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02410;old_locus_tag=BDI4_1060057 NZ_CAJZAS010000009.1 Protein Homology CDS 58866 59786 . - 0 ID=cds-WP_223959544.1;Parent=gene-LDO45_RS02410;Dbxref=GenBank:WP_223959544.1;Name=WP_223959544.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900150.1;locus_tag=LDO45_RS02410;product=LysR family transcriptional regulator;protein_id=WP_223959544.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 59897 60325 . + . ID=gene-LDO45_RS02415;Name=LDO45_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02415;old_locus_tag=BDI4_1060058 NZ_CAJZAS010000009.1 Protein Homology CDS 59897 60325 . + 0 ID=cds-WP_059689493.1;Parent=gene-LDO45_RS02415;Dbxref=GenBank:WP_059689493.1;Name=WP_059689493.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338528.1;locus_tag=LDO45_RS02415;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_059689493.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 60393 61640 . + . ID=gene-LDO45_RS02420;Name=LDO45_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02420;old_locus_tag=BDI4_1060059 NZ_CAJZAS010000009.1 Protein Homology CDS 60393 61640 . + 0 ID=cds-WP_059531732.1;Parent=gene-LDO45_RS02420;Dbxref=GenBank:WP_059531732.1;Name=WP_059531732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330295.1;locus_tag=LDO45_RS02420;product=aconitase X;protein_id=WP_059531732.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 61633 62082 . + . ID=gene-LDO45_RS02425;Name=LDO45_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02425;old_locus_tag=BDI4_1060060 NZ_CAJZAS010000009.1 Protein Homology CDS 61633 62082 . + 0 ID=cds-WP_223959546.1;Parent=gene-LDO45_RS02425;Dbxref=GenBank:WP_223959546.1;Name=WP_223959546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900147.1;locus_tag=LDO45_RS02425;product=aconitase X swivel domain-containing protein;protein_id=WP_223959546.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 62207 63289 . - . ID=gene-LDO45_RS02430;Name=LDO45_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02430;old_locus_tag=BDI4_1060061 NZ_CAJZAS010000009.1 Protein Homology CDS 62207 63289 . - 0 ID=cds-WP_223959548.1;Parent=gene-LDO45_RS02430;Dbxref=GenBank:WP_223959548.1;Name=WP_223959548.1;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660406.1;locus_tag=LDO45_RS02430;product=AraC family transcriptional regulator;protein_id=WP_223959548.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 63366 65399 . + . ID=gene-LDO45_RS02435;Name=LDO45_RS02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02435;old_locus_tag=BDI4_1060062 NZ_CAJZAS010000009.1 Protein Homology CDS 63366 65399 . + 0 ID=cds-WP_223959551.1;Parent=gene-LDO45_RS02435;Dbxref=GenBank:WP_223959551.1;Name=WP_223959551.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004544654.1;locus_tag=LDO45_RS02435;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_223959551.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 65436 65840 . - . ID=gene-LDO45_RS02440;Name=LDO45_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02440;old_locus_tag=BDI4_1060063 NZ_CAJZAS010000009.1 Protein Homology CDS 65436 65840 . - 0 ID=cds-WP_059531720.1;Parent=gene-LDO45_RS02440;Dbxref=GenBank:WP_059531720.1;Name=WP_059531720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881486.1;locus_tag=LDO45_RS02440;product=DUF2471 family protein;protein_id=WP_059531720.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 66027 66920 . - . ID=gene-LDO45_RS02445;Name=LDO45_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02445;old_locus_tag=BDI4_1060065 NZ_CAJZAS010000009.1 Protein Homology CDS 66027 66920 . - 0 ID=cds-WP_223959553.1;Parent=gene-LDO45_RS02445;Dbxref=GenBank:WP_223959553.1;Name=WP_223959553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484342.1;locus_tag=LDO45_RS02445;product=LysR family transcriptional regulator;protein_id=WP_223959553.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 67007 67792 . + . ID=gene-LDO45_RS02450;Name=LDO45_RS02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02450;old_locus_tag=BDI4_1060066 NZ_CAJZAS010000009.1 Protein Homology CDS 67007 67792 . + 0 ID=cds-WP_059531714.1;Parent=gene-LDO45_RS02450;Dbxref=GenBank:WP_059531714.1;Name=WP_059531714.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756620.1;locus_tag=LDO45_RS02450;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_059531714.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 67932 68222 . - . ID=gene-LDO45_RS02455;Name=catC;gbkey=Gene;gene=catC;gene_biotype=protein_coding;locus_tag=LDO45_RS02455;old_locus_tag=BDI4_1060067 NZ_CAJZAS010000009.1 Protein Homology CDS 67932 68222 . - 0 ID=cds-WP_050017398.1;Parent=gene-LDO45_RS02455;Dbxref=GenBank:WP_050017398.1;Name=WP_050017398.1;Ontology_term=GO:0042952,GO:0016159;gbkey=CDS;gene=catC;go_function=muconolactone delta-isomerase activity|0016159||IEA;go_process=beta-ketoadipate pathway|0042952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009895466.1;locus_tag=LDO45_RS02455;product=muconolactone Delta-isomerase;protein_id=WP_050017398.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 68263 69165 . - . ID=gene-LDO45_RS02460;Name=catA;gbkey=Gene;gene=catA;gene_biotype=protein_coding;locus_tag=LDO45_RS02460;old_locus_tag=BDI4_1060068 NZ_CAJZAS010000009.1 Protein Homology CDS 68263 69165 . - 0 ID=cds-WP_223959555.1;Parent=gene-LDO45_RS02460;Dbxref=GenBank:WP_223959555.1;Name=WP_223959555.1;Ontology_term=GO:0019615,GO:0005506,GO:0018576;gbkey=CDS;gene=catA;go_function=iron ion binding|0005506||IEA,catechol 1%2C2-dioxygenase activity|0018576||IEA;go_process=catechol catabolic process%2C ortho-cleavage|0019615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365533.1;locus_tag=LDO45_RS02460;product=catechol 1%2C2-dioxygenase;protein_id=WP_223959555.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 69202 70335 . - . ID=gene-LDO45_RS02465;Name=LDO45_RS02465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02465;old_locus_tag=BDI4_1060069 NZ_CAJZAS010000009.1 Protein Homology CDS 69202 70335 . - 0 ID=cds-WP_223959569.1;Parent=gene-LDO45_RS02465;Dbxref=GenBank:WP_223959569.1;Name=WP_223959569.1;Ontology_term=GO:0018849,GO:0018850,GO:0030145;gbkey=CDS;go_function=muconate cycloisomerase activity|0018849||IEA,chloromuconate cycloisomerase activity|0018850||IEA,manganese ion binding|0030145||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853729.1;locus_tag=LDO45_RS02465;product=muconate/chloromuconate family cycloisomerase;protein_id=WP_223959569.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 70427 71317 . + . ID=gene-LDO45_RS02470;Name=LDO45_RS02470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02470;old_locus_tag=BDI4_1060070 NZ_CAJZAS010000009.1 Protein Homology CDS 70427 71317 . + 0 ID=cds-WP_059531705.1;Parent=gene-LDO45_RS02470;Dbxref=GenBank:WP_059531705.1;Name=WP_059531705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548240.1;locus_tag=LDO45_RS02470;product=LysR family transcriptional regulator;protein_id=WP_059531705.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 71492 72448 . - . ID=gene-LDO45_RS02475;Name=andR;gbkey=Gene;gene=andR;gene_biotype=protein_coding;locus_tag=LDO45_RS02475;old_locus_tag=BDI4_1060071 NZ_CAJZAS010000009.1 Protein Homology CDS 71492 72448 . - 0 ID=cds-WP_059531702.1;Parent=gene-LDO45_RS02475;Dbxref=GenBank:WP_059531702.1;Name=WP_059531702.1;Ontology_term=GO:0009056,GO:0003700,GO:0043565;gbkey=CDS;gene=andR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338516.1;locus_tag=LDO45_RS02475;product=anthranilate 1%2C2-dioxygenase regulatory protein AndR;protein_id=WP_059531702.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 72661 73932 . + . ID=gene-LDO45_RS02480;Name=andAc;gbkey=Gene;gene=andAc;gene_biotype=protein_coding;locus_tag=LDO45_RS02480;old_locus_tag=BDI4_1060072 NZ_CAJZAS010000009.1 Protein Homology CDS 72661 73932 . + 0 ID=cds-WP_059448779.1;Parent=gene-LDO45_RS02480;Dbxref=GenBank:WP_059448779.1;Name=WP_059448779.1;Ontology_term=GO:0009056,GO:0018618;gbkey=CDS;gene=andAc;go_function=anthranilate 1%2C2-dioxygenase (deaminating%2C decarboxylating) activity|0018618||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412648.1;locus_tag=LDO45_RS02480;product=anthranilate 1%2C2-dioxygenase large subunit AndAc;protein_id=WP_059448779.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 73950 74435 . + . ID=gene-LDO45_RS02485;Name=andAd;gbkey=Gene;gene=andAd;gene_biotype=protein_coding;locus_tag=LDO45_RS02485;old_locus_tag=BDI4_1060073 NZ_CAJZAS010000009.1 Protein Homology CDS 73950 74435 . + 0 ID=cds-WP_059531699.1;Parent=gene-LDO45_RS02485;Dbxref=GenBank:WP_059531699.1;Name=WP_059531699.1;Ontology_term=GO:0009056,GO:0018618;gbkey=CDS;gene=andAd;go_function=anthranilate 1%2C2-dioxygenase (deaminating%2C decarboxylating) activity|0018618||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881495.1;locus_tag=LDO45_RS02485;product=anthranilate 1%2C2-dioxygenase small subunit AndAd;protein_id=WP_059531699.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 74452 74778 . + . ID=gene-LDO45_RS02490;Name=andAb;gbkey=Gene;gene=andAb;gene_biotype=protein_coding;locus_tag=LDO45_RS02490;old_locus_tag=BDI4_1060074 NZ_CAJZAS010000009.1 Protein Homology CDS 74452 74778 . + 0 ID=cds-WP_039344765.1;Parent=gene-LDO45_RS02490;Dbxref=GenBank:WP_039344765.1;Name=WP_039344765.1;Ontology_term=GO:0009056,GO:0051537;gbkey=CDS;gene=andAb;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355916.1;locus_tag=LDO45_RS02490;product=anthranilate 1%2C2-dioxygenase ferredoxin subunit AndAb;protein_id=WP_039344765.1;transl_table=11 NZ_CAJZAS010000009.1 RefSeq gene 74768 74994 . + . ID=gene-LDO45_RS02495;Name=LDO45_RS02495;end_range=74994,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02495;partial=true NZ_CAJZAS010000009.1 Protein Homology CDS 74768 74994 . + 0 ID=cds-WP_223959571.1;Parent=gene-LDO45_RS02495;Dbxref=GenBank:WP_223959571.1;Name=WP_223959571.1;Ontology_term=GO:0016491;end_range=74994,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338514.1;locus_tag=LDO45_RS02495;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_223959571.1;transl_table=11 ##sequence-region NZ_CAJZAS010000010.1 1 41536 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000010.1 RefSeq region 1 41536 . + . ID=NZ_CAJZAS010000010.1:1..41536;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_107 NZ_CAJZAS010000010.1 RefSeq gene 1 332 . + . ID=gene-LDO45_RS02500;Name=LDO45_RS02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02500;old_locus_tag=BDI4_1070001;partial=true;start_range=.,1 NZ_CAJZAS010000010.1 Protein Homology CDS 1 332 . + 2 ID=cds-WP_223959597.1;Parent=gene-LDO45_RS02500;Dbxref=GenBank:WP_223959597.1;Name=WP_223959597.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493180.1;locus_tag=LDO45_RS02500;partial=true;product=MFS transporter;protein_id=WP_223959597.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 476 1642 . - . ID=gene-LDO45_RS02505;Name=LDO45_RS02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02505;old_locus_tag=BDI4_1070002 NZ_CAJZAS010000010.1 Protein Homology CDS 476 1642 . - 0 ID=cds-WP_059531574.1;Parent=gene-LDO45_RS02505;Dbxref=GenBank:WP_059531574.1;Name=WP_059531574.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482818.1;locus_tag=LDO45_RS02505;product=glycosyltransferase family 4 protein;protein_id=WP_059531574.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 1642 2826 . - . ID=gene-LDO45_RS02510;Name=LDO45_RS02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02510;old_locus_tag=BDI4_1070003 NZ_CAJZAS010000010.1 Protein Homology CDS 1642 2826 . - 0 ID=cds-WP_059531577.1;Parent=gene-LDO45_RS02510;Dbxref=GenBank:WP_059531577.1;Name=WP_059531577.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529078.1;locus_tag=LDO45_RS02510;product=glycosyltransferase family 4 protein;protein_id=WP_059531577.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 2823 4289 . - . ID=gene-LDO45_RS02515;Name=LDO45_RS02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02515;old_locus_tag=BDI4_1070004 NZ_CAJZAS010000010.1 Protein Homology CDS 2823 4289 . - 0 ID=cds-WP_059531583.1;Parent=gene-LDO45_RS02515;Dbxref=GenBank:WP_059531583.1;Name=WP_059531583.1;Ontology_term=GO:0008754,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=O antigen ligase activity|0008754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881540.1;locus_tag=LDO45_RS02515;product=O-antigen ligase;protein_id=WP_059531583.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 4300 5436 . - . ID=gene-LDO45_RS02520;Name=LDO45_RS02520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02520;old_locus_tag=BDI4_1070005 NZ_CAJZAS010000010.1 Protein Homology CDS 4300 5436 . - 0 ID=cds-WP_223959599.1;Parent=gene-LDO45_RS02520;Dbxref=GenBank:WP_223959599.1;Name=WP_223959599.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416882.1;locus_tag=LDO45_RS02520;product=glycosyltransferase family 4 protein;protein_id=WP_223959599.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 5564 6523 . - . ID=gene-LDO45_RS02525;Name=LDO45_RS02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02525;old_locus_tag=BDI4_1070006 NZ_CAJZAS010000010.1 Protein Homology CDS 5564 6523 . - 0 ID=cds-WP_059531589.1;Parent=gene-LDO45_RS02525;Dbxref=GenBank:WP_059531589.1;Name=WP_059531589.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482934.1;locus_tag=LDO45_RS02525;product=glycosyltransferase family 2 protein;protein_id=WP_059531589.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 6586 8811 . - . ID=gene-LDO45_RS02530;Name=LDO45_RS02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02530;old_locus_tag=BDI4_1070007 NZ_CAJZAS010000010.1 Protein Homology CDS 6586 8811 . - 0 ID=cds-WP_059531592.1;Parent=gene-LDO45_RS02530;Dbxref=GenBank:WP_059531592.1;Name=WP_059531592.1;Ontology_term=GO:0045226;gbkey=CDS;go_process=extracellular polysaccharide biosynthetic process|0045226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765453.1;locus_tag=LDO45_RS02530;product=polysaccharide biosynthesis tyrosine autokinase;protein_id=WP_059531592.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 8862 10040 . - . ID=gene-LDO45_RS02535;Name=LDO45_RS02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02535;old_locus_tag=BDI4_1070008 NZ_CAJZAS010000010.1 Protein Homology CDS 8862 10040 . - 0 ID=cds-WP_059531595.1;Parent=gene-LDO45_RS02535;Dbxref=GenBank:WP_059531595.1;Name=WP_059531595.1;Ontology_term=GO:0015774,GO:0015159,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=polysaccharide transmembrane transporter activity|0015159||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009978106.1;locus_tag=LDO45_RS02535;product=polysaccharide biosynthesis/export family protein;protein_id=WP_059531595.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 10034 10477 . - . ID=gene-LDO45_RS02540;Name=LDO45_RS02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02540;old_locus_tag=BDI4_1070009 NZ_CAJZAS010000010.1 Protein Homology CDS 10034 10477 . - 0 ID=cds-WP_059531598.1;Parent=gene-LDO45_RS02540;Dbxref=GenBank:WP_059531598.1;Name=WP_059531598.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900072.1;locus_tag=LDO45_RS02540;product=low molecular weight protein-tyrosine-phosphatase;protein_id=WP_059531598.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 10518 11933 . - . ID=gene-LDO45_RS02545;Name=LDO45_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02545;old_locus_tag=BDI4_1070010 NZ_CAJZAS010000010.1 Protein Homology CDS 10518 11933 . - 0 ID=cds-WP_059531601.1;Parent=gene-LDO45_RS02545;Dbxref=GenBank:WP_059531601.1;Name=WP_059531601.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765450.1;locus_tag=LDO45_RS02545;product=UDP-glucose/GDP-mannose dehydrogenase family protein;protein_id=WP_059531601.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 12005 13378 . - . ID=gene-LDO45_RS02550;Name=LDO45_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02550;old_locus_tag=BDI4_1070011 NZ_CAJZAS010000010.1 Protein Homology CDS 12005 13378 . - 0 ID=cds-WP_059532388.1;Parent=gene-LDO45_RS02550;Dbxref=GenBank:WP_059532388.1;Name=WP_059532388.1;Ontology_term=GO:0016780;gbkey=CDS;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525082.1;locus_tag=LDO45_RS02550;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_059532388.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 13806 15332 . + . ID=gene-LDO45_RS02555;Name=LDO45_RS02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02555;old_locus_tag=BDI4_1070012 NZ_CAJZAS010000010.1 Protein Homology CDS 13806 15332 . + 0 ID=cds-WP_223959607.1;Parent=gene-LDO45_RS02555;Dbxref=GenBank:WP_223959607.1;Name=WP_223959607.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399386.1;locus_tag=LDO45_RS02555;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_223959607.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 15451 16392 . - . ID=gene-LDO45_RS02560;Name=LDO45_RS02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02560;old_locus_tag=BDI4_1070013 NZ_CAJZAS010000010.1 Protein Homology CDS 15451 16392 . - 0 ID=cds-WP_223959608.1;Parent=gene-LDO45_RS02560;Dbxref=GenBank:WP_223959608.1;Name=WP_223959608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482942.1;locus_tag=LDO45_RS02560;product=transposase;protein_id=WP_223959608.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 17116 17697 . - . ID=gene-LDO45_RS02565;Name=LDO45_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02565;old_locus_tag=BDI4_1070017 NZ_CAJZAS010000010.1 Protein Homology CDS 17116 17697 . - 0 ID=cds-WP_223959610.1;Parent=gene-LDO45_RS02565;Dbxref=GenBank:WP_223959610.1;Name=WP_223959610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900077.1;locus_tag=LDO45_RS02565;product=DUF3501 family protein;protein_id=WP_223959610.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 17742 19079 . - . ID=gene-LDO45_RS02570;Name=LDO45_RS02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02570;old_locus_tag=BDI4_1070018 NZ_CAJZAS010000010.1 Protein Homology CDS 17742 19079 . - 0 ID=cds-WP_223959612.1;Parent=gene-LDO45_RS02570;Dbxref=GenBank:WP_223959612.1;Name=WP_223959612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190664.1;locus_tag=LDO45_RS02570;product=heterodisulfide reductase-related iron-sulfur binding cluster;protein_id=WP_223959612.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 19203 19625 . - . ID=gene-LDO45_RS02575;Name=LDO45_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02575;old_locus_tag=BDI4_1070019 NZ_CAJZAS010000010.1 Protein Homology CDS 19203 19625 . - 0 ID=cds-WP_059466550.1;Parent=gene-LDO45_RS02575;Dbxref=GenBank:WP_059466550.1;Name=WP_059466550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190903.1;locus_tag=LDO45_RS02575;product=rubrerythrin family protein;protein_id=WP_059466550.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 19915 21183 . - . ID=gene-LDO45_RS02580;Name=LDO45_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02580;old_locus_tag=BDI4_1070020 NZ_CAJZAS010000010.1 Protein Homology CDS 19915 21183 . - 0 ID=cds-WP_059531613.1;Parent=gene-LDO45_RS02580;Dbxref=GenBank:WP_059531613.1;Name=WP_059531613.1;Ontology_term=GO:0016987;gbkey=CDS;go_function=sigma factor activity|0016987||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548203.1;locus_tag=LDO45_RS02580;product=RNA polymerase sigma factor;protein_id=WP_059531613.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 21180 21596 . - . ID=gene-LDO45_RS02585;Name=LDO45_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02585;old_locus_tag=BDI4_1070021 NZ_CAJZAS010000010.1 Protein Homology CDS 21180 21596 . - 0 ID=cds-WP_059531616.1;Parent=gene-LDO45_RS02585;Dbxref=GenBank:WP_059531616.1;Name=WP_059531616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497296.1;locus_tag=LDO45_RS02585;product=VOC family protein;protein_id=WP_059531616.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 21632 22051 . - . ID=gene-LDO45_RS02590;Name=LDO45_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02590;old_locus_tag=BDI4_1070022 NZ_CAJZAS010000010.1 Protein Homology CDS 21632 22051 . - 0 ID=cds-WP_059699843.1;Parent=gene-LDO45_RS02590;Dbxref=GenBank:WP_059699843.1;Name=WP_059699843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757945.1;locus_tag=LDO45_RS02590;product=YciI family protein;protein_id=WP_059699843.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 22177 22530 . - . ID=gene-LDO45_RS02595;Name=LDO45_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02595;old_locus_tag=BDI4_1070023 NZ_CAJZAS010000010.1 Protein Homology CDS 22177 22530 . - 0 ID=cds-WP_059689518.1;Parent=gene-LDO45_RS02595;Dbxref=GenBank:WP_059689518.1;Name=WP_059689518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365581.1;locus_tag=LDO45_RS02595;product=YciI family protein;protein_id=WP_059689518.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq pseudogene 22792 22971 . + . ID=gene-LDO45_RS02600;Name=LDO45_RS02600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS02600;old_locus_tag=BDI4_1070024;partial=true;pseudo=true;start_range=.,22792 NZ_CAJZAS010000010.1 Protein Homology CDS 22792 22971 . + 0 ID=cds-LDO45_RS02600;Parent=gene-LDO45_RS02600;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494002.1;locus_tag=LDO45_RS02600;partial=true;product=hypothetical protein;pseudo=true;start_range=.,22792;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 23052 23324 . - . ID=gene-LDO45_RS02605;Name=LDO45_RS02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02605 NZ_CAJZAS010000010.1 GeneMarkS-2+ CDS 23052 23324 . - 0 ID=cds-WP_156437114.1;Parent=gene-LDO45_RS02605;Dbxref=GenBank:WP_156437114.1;Name=WP_156437114.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS02605;product=hypothetical protein;protein_id=WP_156437114.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 23323 23709 . + . ID=gene-LDO45_RS02610;Name=LDO45_RS02610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02610;old_locus_tag=BDI4_1070026 NZ_CAJZAS010000010.1 Protein Homology CDS 23323 23709 . + 0 ID=cds-WP_059531622.1;Parent=gene-LDO45_RS02610;Dbxref=GenBank:WP_059531622.1;Name=WP_059531622.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355880.1;locus_tag=LDO45_RS02610;product=YqjD family protein;protein_id=WP_059531622.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 23774 24358 . + . ID=gene-LDO45_RS02615;Name=LDO45_RS02615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02615;old_locus_tag=BDI4_1070027 NZ_CAJZAS010000010.1 Protein Homology CDS 23774 24358 . + 0 ID=cds-WP_059531625.1;Parent=gene-LDO45_RS02615;Dbxref=GenBank:WP_059531625.1;Name=WP_059531625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885032.1;locus_tag=LDO45_RS02615;product=YSC84-related protein;protein_id=WP_059531625.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 24590 25642 . + . ID=gene-LDO45_RS02620;Name=LDO45_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02620;old_locus_tag=BDI4_1070028 NZ_CAJZAS010000010.1 Protein Homology CDS 24590 25642 . + 0 ID=cds-WP_059531628.1;Parent=gene-LDO45_RS02620;Dbxref=GenBank:WP_059531628.1;Name=WP_059531628.1;Ontology_term=GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487821.1;locus_tag=LDO45_RS02620;product=AI-2E family transporter;protein_id=WP_059531628.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 25652 26155 . - . ID=gene-LDO45_RS02625;Name=LDO45_RS02625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02625;old_locus_tag=BDI4_1070029 NZ_CAJZAS010000010.1 Protein Homology CDS 25652 26155 . - 0 ID=cds-WP_223959615.1;Parent=gene-LDO45_RS02625;Dbxref=GenBank:WP_223959615.1;Name=WP_223959615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660442.1;locus_tag=LDO45_RS02625;product=thioesterase;protein_id=WP_223959615.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 26322 27338 . - . ID=gene-LDO45_RS02630;Name=LDO45_RS02630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02630;old_locus_tag=BDI4_1070030 NZ_CAJZAS010000010.1 Protein Homology CDS 26322 27338 . - 0 ID=cds-WP_223959617.1;Parent=gene-LDO45_RS02630;Dbxref=GenBank:WP_223959617.1;Name=WP_223959617.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255233.1;locus_tag=LDO45_RS02630;product=NADP-dependent oxidoreductase;protein_id=WP_223959617.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 27373 28161 . - . ID=gene-LDO45_RS02635;Name=LDO45_RS02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02635;old_locus_tag=BDI4_1070031 NZ_CAJZAS010000010.1 Protein Homology CDS 27373 28161 . - 0 ID=cds-WP_223959619.1;Parent=gene-LDO45_RS02635;Dbxref=GenBank:WP_223959619.1;Name=WP_223959619.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089074.1;locus_tag=LDO45_RS02635;product=SDR family oxidoreductase;protein_id=WP_223959619.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 28589 29179 . - . ID=gene-LDO45_RS02640;Name=LDO45_RS02640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02640;old_locus_tag=BDI4_1070032 NZ_CAJZAS010000010.1 Protein Homology CDS 28589 29179 . - 0 ID=cds-WP_059689514.1;Parent=gene-LDO45_RS02640;Dbxref=GenBank:WP_059689514.1;Name=WP_059689514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479504.1;locus_tag=LDO45_RS02640;product=phosphatase PAP2 family protein;protein_id=WP_059689514.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 29259 30575 . - . ID=gene-LDO45_RS02645;Name=LDO45_RS02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02645;old_locus_tag=BDI4_1070033 NZ_CAJZAS010000010.1 Protein Homology CDS 29259 30575 . - 0 ID=cds-WP_223959621.1;Parent=gene-LDO45_RS02645;Dbxref=GenBank:WP_223959621.1;Name=WP_223959621.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753357.1;locus_tag=LDO45_RS02645;product=Nramp family divalent metal transporter;protein_id=WP_223959621.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 30524 31585 . - . ID=gene-LDO45_RS02650;Name=LDO45_RS02650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02650;old_locus_tag=BDI4_1070034 NZ_CAJZAS010000010.1 Protein Homology CDS 30524 31585 . - 0 ID=cds-WP_223959623.1;Parent=gene-LDO45_RS02650;Dbxref=GenBank:WP_223959623.1;Name=WP_223959623.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900093.1;locus_tag=LDO45_RS02650;product=helix-turn-helix domain-containing protein;protein_id=WP_223959623.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 32053 32973 . + . ID=gene-LDO45_RS02655;Name=LDO45_RS02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02655;old_locus_tag=BDI4_1070035 NZ_CAJZAS010000010.1 Protein Homology CDS 32053 32973 . + 0 ID=cds-WP_223959625.1;Parent=gene-LDO45_RS02655;Dbxref=GenBank:WP_223959625.1;Name=WP_223959625.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365560.1;locus_tag=LDO45_RS02655;product=LysR family transcriptional regulator;protein_id=WP_223959625.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 33093 33494 . + . ID=gene-LDO45_RS02660;Name=LDO45_RS02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02660;old_locus_tag=BDI4_1070036 NZ_CAJZAS010000010.1 Protein Homology CDS 33093 33494 . + 0 ID=cds-WP_059466564.1;Parent=gene-LDO45_RS02660;Dbxref=GenBank:WP_059466564.1;Name=WP_059466564.1;Ontology_term=GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548217.1;locus_tag=LDO45_RS02660;product=OsmC family protein;protein_id=WP_059466564.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 33595 34476 . - . ID=gene-LDO45_RS02665;Name=LDO45_RS02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02665;old_locus_tag=BDI4_1070037 NZ_CAJZAS010000010.1 Protein Homology CDS 33595 34476 . - 0 ID=cds-WP_223959627.1;Parent=gene-LDO45_RS02665;Dbxref=GenBank:WP_223959627.1;Name=WP_223959627.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753361.1;locus_tag=LDO45_RS02665;product=Dyp-type peroxidase;protein_id=WP_223959627.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 34964 36826 . + . ID=gene-LDO45_RS02670;Name=LDO45_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02670;old_locus_tag=BDI4_1070038 NZ_CAJZAS010000010.1 Protein Homology CDS 34964 36826 . + 0 ID=cds-WP_223959629.1;Parent=gene-LDO45_RS02670;Dbxref=GenBank:WP_223959629.1;Name=WP_223959629.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330243.1;locus_tag=LDO45_RS02670;product=ABC transporter ATP-binding protein;protein_id=WP_223959629.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 36942 37655 . + . ID=gene-LDO45_RS02675;Name=LDO45_RS02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02675;old_locus_tag=BDI4_1070039 NZ_CAJZAS010000010.1 Protein Homology CDS 36942 37655 . + 0 ID=cds-WP_059531652.1;Parent=gene-LDO45_RS02675;Dbxref=GenBank:WP_059531652.1;Name=WP_059531652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753363.1;locus_tag=LDO45_RS02675;product=riboflavin synthase;protein_id=WP_059531652.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq gene 37738 38979 . - . ID=gene-LDO45_RS02680;Name=LDO45_RS02680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02680;old_locus_tag=BDI4_1070040 NZ_CAJZAS010000010.1 Protein Homology CDS 37738 38979 . - 0 ID=cds-WP_223959630.1;Parent=gene-LDO45_RS02680;Dbxref=GenBank:WP_223959630.1;Name=WP_223959630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217488.1;locus_tag=LDO45_RS02680;product=voltage-gated chloride channel family protein;protein_id=WP_223959630.1;transl_table=11 NZ_CAJZAS010000010.1 cmsearch riboswitch 39059 39161 . - . ID=id-NZ_CAJZAS010000010.1:39059..39161;Dbxref=RFAM:RF01734;Note=Fluoride riboswitches increase expression of downstream genes that help mitigate the toxic effects of very high levels of fluoride%3B They are found in a wide variety of bacteria and archaea;bound_moiety=fluoride;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAS010000010.1 RefSeq gene 39218 40237 . - . ID=gene-LDO45_RS02685;Name=LDO45_RS02685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02685;old_locus_tag=BDI4_1070041 NZ_CAJZAS010000010.1 Protein Homology CDS 39218 40237 . - 0 ID=cds-WP_223959638.1;Parent=gene-LDO45_RS02685;Dbxref=GenBank:WP_223959638.1;Name=WP_223959638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479514.1;locus_tag=LDO45_RS02685;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=WP_223959638.1;transl_table=11 NZ_CAJZAS010000010.1 RefSeq pseudogene 40234 41536 . - . ID=gene-LDO45_RS02690;Name=LDO45_RS02690;end_range=41536,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS02690;old_locus_tag=BDI4_1070042;partial=true;pseudo=true NZ_CAJZAS010000010.1 Protein Homology CDS 40234 41536 . - 1 ID=cds-LDO45_RS02690;Parent=gene-LDO45_RS02690;Note=too many ambiguous residues%3B incomplete%3B missing N-terminus;Ontology_term=GO:0000160;end_range=41536,.;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355897.1;locus_tag=LDO45_RS02690;partial=true;product=response regulator;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000011.1 1 69004 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000011.1 RefSeq region 1 69004 . + . ID=NZ_CAJZAS010000011.1:1..69004;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_108 NZ_CAJZAS010000011.1 RefSeq gene 204 1034 . + . ID=gene-LDO45_RS02695;Name=LDO45_RS02695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02695;old_locus_tag=BDI4_1080001 NZ_CAJZAS010000011.1 Protein Homology CDS 204 1034 . + 0 ID=cds-WP_059506104.1;Parent=gene-LDO45_RS02695;Dbxref=GenBank:WP_059506104.1;Name=WP_059506104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545102.1;locus_tag=LDO45_RS02695;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_059506104.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 1217 1293 . + . ID=gene-LDO45_RS02700;Name=LDO45_RS02700;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS02700;old_locus_tag=BDI4_TRNA26 NZ_CAJZAS010000011.1 tRNAscan-SE tRNA 1217 1293 . + . ID=rna-LDO45_RS02700;Parent=gene-LDO45_RS02700;anticodon=(pos:1251..1253);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS02700;product=tRNA-Arg NZ_CAJZAS010000011.1 tRNAscan-SE exon 1217 1293 . + . ID=exon-LDO45_RS02700-1;Parent=rna-LDO45_RS02700;anticodon=(pos:1251..1253);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS02700;product=tRNA-Arg NZ_CAJZAS010000011.1 RefSeq gene 1525 2301 . + . ID=gene-LDO45_RS02705;Name=LDO45_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02705;old_locus_tag=BDI4_1080003 NZ_CAJZAS010000011.1 Protein Homology CDS 1525 2301 . + 0 ID=cds-WP_223959641.1;Parent=gene-LDO45_RS02705;Dbxref=GenBank:WP_223959641.1;Name=WP_223959641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003271469.1;locus_tag=LDO45_RS02705;product=hypothetical protein;protein_id=WP_223959641.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 2516 3445 . - . ID=gene-LDO45_RS02710;Name=LDO45_RS02710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02710;old_locus_tag=BDI4_1080004 NZ_CAJZAS010000011.1 GeneMarkS-2+ CDS 2516 3445 . - 0 ID=cds-WP_223959649.1;Parent=gene-LDO45_RS02710;Dbxref=GenBank:WP_223959649.1;Name=WP_223959649.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS02710;product=hypothetical protein;protein_id=WP_223959649.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 4185 5357 . + . ID=gene-LDO45_RS02715;Name=LDO45_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02715;old_locus_tag=BDI4_1080008 NZ_CAJZAS010000011.1 GeneMarkS-2+ CDS 4185 5357 . + 0 ID=cds-WP_223959651.1;Parent=gene-LDO45_RS02715;Dbxref=GenBank:WP_223959651.1;Name=WP_223959651.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS02715;product=hypothetical protein;protein_id=WP_223959651.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 5810 6961 . + . ID=gene-LDO45_RS02720;Name=LDO45_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02720;old_locus_tag=BDI4_1080009 NZ_CAJZAS010000011.1 GeneMarkS-2+ CDS 5810 6961 . + 0 ID=cds-WP_223959653.1;Parent=gene-LDO45_RS02720;Dbxref=GenBank:WP_223959653.1;Name=WP_223959653.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS02720;product=hypothetical protein;protein_id=WP_223959653.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 7243 8334 . + . ID=gene-LDO45_RS02725;Name=LDO45_RS02725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02725;old_locus_tag=BDI4_1080011 NZ_CAJZAS010000011.1 Protein Homology CDS 7243 8334 . + 0 ID=cds-WP_223959655.1;Parent=gene-LDO45_RS02725;Dbxref=GenBank:WP_223959655.1;Name=WP_223959655.1;Ontology_term=GO:0009253,GO:0016998,GO:0003796;gbkey=CDS;go_function=lysozyme activity|0003796||IEA;go_process=peptidoglycan catabolic process|0009253||IEA,cell wall macromolecule catabolic process|0016998||IEA;inference=COORDINATES: protein motif:HMM:NF013357.5;locus_tag=LDO45_RS02725;product=GH25 family lysozyme;protein_id=WP_223959655.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 8547 9413 . + . ID=gene-LDO45_RS02730;Name=LDO45_RS02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02730;old_locus_tag=BDI4_1080012 NZ_CAJZAS010000011.1 GeneMarkS-2+ CDS 8547 9413 . + 0 ID=cds-WP_223959657.1;Parent=gene-LDO45_RS02730;Dbxref=GenBank:WP_223959657.1;Name=WP_223959657.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS02730;product=hypothetical protein;protein_id=WP_223959657.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 9623 10213 . - . ID=gene-LDO45_RS02735;Name=LDO45_RS02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02735 NZ_CAJZAS010000011.1 GeneMarkS-2+ CDS 9623 10213 . - 0 ID=cds-WP_223959665.1;Parent=gene-LDO45_RS02735;Dbxref=GenBank:WP_223959665.1;Name=WP_223959665.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS02735;product=hypothetical protein;protein_id=WP_223959665.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 10586 10798 . - . ID=gene-LDO45_RS02740;Name=LDO45_RS02740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02740;old_locus_tag=BDI4_1080014 NZ_CAJZAS010000011.1 Protein Homology CDS 10586 10798 . - 0 ID=cds-WP_223959667.1;Parent=gene-LDO45_RS02740;Dbxref=GenBank:WP_223959667.1;Name=WP_223959667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897401.1;locus_tag=LDO45_RS02740;product=hypothetical protein;protein_id=WP_223959667.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 10828 10953 . + . ID=gene-LDO45_RS34175;Name=LDO45_RS34175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34175;old_locus_tag=BDI4_1080015 NZ_CAJZAS010000011.1 GeneMarkS-2+ CDS 10828 10953 . + 0 ID=cds-WP_290370987.1;Parent=gene-LDO45_RS34175;Dbxref=GenBank:WP_290370987.1;Name=WP_290370987.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34175;product=hypothetical protein;protein_id=WP_290370987.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 10958 11284 . - . ID=gene-LDO45_RS02745;Name=LDO45_RS02745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02745;old_locus_tag=BDI4_1080016 NZ_CAJZAS010000011.1 Protein Homology CDS 10958 11284 . - 0 ID=cds-WP_223959669.1;Parent=gene-LDO45_RS02745;Dbxref=GenBank:WP_223959669.1;Name=WP_223959669.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010111305.1;locus_tag=LDO45_RS02745;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_223959669.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 11417 11608 . - . ID=gene-LDO45_RS02750;Name=LDO45_RS02750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02750;old_locus_tag=BDI4_1080017 NZ_CAJZAS010000011.1 Protein Homology CDS 11417 11608 . - 0 ID=cds-WP_059740853.1;Parent=gene-LDO45_RS02750;Dbxref=GenBank:WP_059740853.1;Name=WP_059740853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007586026.1;locus_tag=LDO45_RS02750;product=hypothetical protein;protein_id=WP_059740853.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 11979 12344 . + . ID=gene-LDO45_RS02755;Name=LDO45_RS02755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02755;old_locus_tag=BDI4_1080019 NZ_CAJZAS010000011.1 GeneMarkS-2+ CDS 11979 12344 . + 0 ID=cds-WP_223959671.1;Parent=gene-LDO45_RS02755;Dbxref=GenBank:WP_223959671.1;Name=WP_223959671.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS02755;product=hypothetical protein;protein_id=WP_223959671.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 12812 13171 . - . ID=gene-LDO45_RS02760;Name=LDO45_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02760;old_locus_tag=BDI4_1080022 NZ_CAJZAS010000011.1 GeneMarkS-2+ CDS 12812 13171 . - 0 ID=cds-WP_223959672.1;Parent=gene-LDO45_RS02760;Dbxref=GenBank:WP_223959672.1;Name=WP_223959672.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS02760;product=hypothetical protein;protein_id=WP_223959672.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 13214 13588 . - . ID=gene-LDO45_RS02765;Name=LDO45_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02765;old_locus_tag=BDI4_1080023 NZ_CAJZAS010000011.1 GeneMarkS-2+ CDS 13214 13588 . - 0 ID=cds-WP_223959681.1;Parent=gene-LDO45_RS02765;Dbxref=GenBank:WP_223959681.1;Name=WP_223959681.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS02765;product=hypothetical protein;protein_id=WP_223959681.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 13934 14275 . + . ID=gene-LDO45_RS02770;Name=LDO45_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02770;old_locus_tag=BDI4_1080024 NZ_CAJZAS010000011.1 Protein Homology CDS 13934 14275 . + 0 ID=cds-WP_374109505.1;Parent=gene-LDO45_RS02770;Dbxref=GenBank:WP_374109505.1;Name=WP_374109505.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003265426.1;locus_tag=LDO45_RS02770;product=helix-turn-helix domain-containing protein;protein_id=WP_374109505.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 14540 15775 . + . ID=gene-LDO45_RS02775;Name=LDO45_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02775;old_locus_tag=BDI4_1080027 NZ_CAJZAS010000011.1 GeneMarkS-2+ CDS 14540 15775 . + 0 ID=cds-WP_223959685.1;Parent=gene-LDO45_RS02775;Dbxref=GenBank:WP_223959685.1;Name=WP_223959685.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS02775;product=hypothetical protein;protein_id=WP_223959685.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 15951 16601 . - . ID=gene-LDO45_RS02780;Name=LDO45_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02780;old_locus_tag=BDI4_1080030 NZ_CAJZAS010000011.1 Protein Homology CDS 15951 16601 . - 0 ID=cds-WP_223959694.1;Parent=gene-LDO45_RS02780;Dbxref=GenBank:WP_223959694.1;Name=WP_223959694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004531863.1;locus_tag=LDO45_RS02780;product=hypothetical protein;protein_id=WP_223959694.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 16603 16902 . - . ID=gene-LDO45_RS02785;Name=LDO45_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02785;old_locus_tag=BDI4_1080031 NZ_CAJZAS010000011.1 Protein Homology CDS 16603 16902 . - 0 ID=cds-WP_223959696.1;Parent=gene-LDO45_RS02785;Dbxref=GenBank:WP_223959696.1;Name=WP_223959696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492477.1;locus_tag=LDO45_RS02785;product=hypothetical protein;protein_id=WP_223959696.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 16984 17388 . - . ID=gene-LDO45_RS02790;Name=LDO45_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02790 NZ_CAJZAS010000011.1 GeneMarkS-2+ CDS 16984 17388 . - 0 ID=cds-WP_223959698.1;Parent=gene-LDO45_RS02790;Dbxref=GenBank:WP_223959698.1;Name=WP_223959698.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS02790;product=hypothetical protein;protein_id=WP_223959698.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 17492 18298 . - . ID=gene-LDO45_RS02795;Name=LDO45_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02795;old_locus_tag=BDI4_1080033 NZ_CAJZAS010000011.1 Protein Homology CDS 17492 18298 . - 0 ID=cds-WP_223959700.1;Parent=gene-LDO45_RS02795;Dbxref=GenBank:WP_223959700.1;Name=WP_223959700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481767.1;locus_tag=LDO45_RS02795;product=DUF4942 domain-containing protein;protein_id=WP_223959700.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 18366 19418 . - . ID=gene-LDO45_RS02800;Name=LDO45_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02800;old_locus_tag=BDI4_1080034 NZ_CAJZAS010000011.1 Protein Homology CDS 18366 19418 . - 0 ID=cds-WP_223959702.1;Parent=gene-LDO45_RS02800;Dbxref=GenBank:WP_223959702.1;Name=WP_223959702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534436.1;locus_tag=LDO45_RS02800;product=YqaJ viral recombinase family protein;protein_id=WP_223959702.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 19491 20459 . - . ID=gene-LDO45_RS02805;Name=LDO45_RS02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02805;old_locus_tag=BDI4_1080035 NZ_CAJZAS010000011.1 Protein Homology CDS 19491 20459 . - 0 ID=cds-WP_223959704.1;Parent=gene-LDO45_RS02805;Dbxref=GenBank:WP_223959704.1;Name=WP_223959704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004555360.1;locus_tag=LDO45_RS02805;product=DUF932 domain-containing protein;protein_id=WP_223959704.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 20551 21012 . - . ID=gene-LDO45_RS02810;Name=LDO45_RS02810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02810;old_locus_tag=BDI4_1080036 NZ_CAJZAS010000011.1 Protein Homology CDS 20551 21012 . - 0 ID=cds-WP_223959706.1;Parent=gene-LDO45_RS02810;Dbxref=GenBank:WP_223959706.1;Name=WP_223959706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020067294.1;locus_tag=LDO45_RS02810;product=hypothetical protein;protein_id=WP_223959706.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 21473 21676 . + . ID=gene-LDO45_RS02815;Name=LDO45_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02815 NZ_CAJZAS010000011.1 GeneMarkS-2+ CDS 21473 21676 . + 0 ID=cds-WP_308051044.1;Parent=gene-LDO45_RS02815;Dbxref=GenBank:WP_308051044.1;Name=WP_308051044.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS02815;product=hypothetical protein;protein_id=WP_308051044.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 21817 22470 . + . ID=gene-LDO45_RS02820;Name=LDO45_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02820;old_locus_tag=BDI4_1080037 NZ_CAJZAS010000011.1 GeneMarkS-2+ CDS 21817 22470 . + 0 ID=cds-WP_223959708.1;Parent=gene-LDO45_RS02820;Dbxref=GenBank:WP_223959708.1;Name=WP_223959708.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS02820;product=hypothetical protein;protein_id=WP_223959708.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 22662 24404 . + . ID=gene-LDO45_RS02825;Name=LDO45_RS02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02825;old_locus_tag=BDI4_1080038 NZ_CAJZAS010000011.1 Protein Homology CDS 22662 24404 . + 0 ID=cds-WP_223959710.1;Parent=gene-LDO45_RS02825;Dbxref=GenBank:WP_223959710.1;Name=WP_223959710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012078885.1;locus_tag=LDO45_RS02825;product=ATP-dependent endonuclease;protein_id=WP_223959710.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 24431 26161 . + . ID=gene-LDO45_RS02830;Name=LDO45_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02830;old_locus_tag=BDI4_1080039 NZ_CAJZAS010000011.1 Protein Homology CDS 24431 26161 . + 0 ID=cds-WP_253074719.1;Parent=gene-LDO45_RS02830;Dbxref=GenBank:WP_253074719.1;Name=WP_253074719.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012078886.1;locus_tag=LDO45_RS02830;product=UvrD-helicase domain-containing protein;protein_id=WP_253074719.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 26124 26744 . + . ID=gene-LDO45_RS02835;Name=LDO45_RS02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02835;old_locus_tag=BDI4_1080040 NZ_CAJZAS010000011.1 Protein Homology CDS 26124 26744 . + 0 ID=cds-WP_223959722.1;Parent=gene-LDO45_RS02835;Dbxref=GenBank:WP_223959722.1;Name=WP_223959722.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017697.5;locus_tag=LDO45_RS02835;product=poly-gamma-glutamate hydrolase family protein;protein_id=WP_223959722.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 26786 27025 . + . ID=gene-LDO45_RS02840;Name=LDO45_RS02840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02840;old_locus_tag=BDI4_1080042 NZ_CAJZAS010000011.1 GeneMarkS-2+ CDS 26786 27025 . + 0 ID=cds-WP_223959724.1;Parent=gene-LDO45_RS02840;Dbxref=GenBank:WP_223959724.1;Name=WP_223959724.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS02840;product=hypothetical protein;protein_id=WP_223959724.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 27073 27912 . + . ID=gene-LDO45_RS02845;Name=qatB;gbkey=Gene;gene=qatB;gene_biotype=protein_coding;locus_tag=LDO45_RS02845;old_locus_tag=BDI4_1080043 NZ_CAJZAS010000011.1 Protein Homology CDS 27073 27912 . + 0 ID=cds-WP_308051045.1;Parent=gene-LDO45_RS02845;Dbxref=GenBank:WP_308051045.1;Name=WP_308051045.1;Ontology_term=GO:0051607;gbkey=CDS;gene=qatB;go_process=defense response to virus|0051607||IEA;inference=COORDINATES: protein motif:HMM:NF041924.1;locus_tag=LDO45_RS02845;product=Qat anti-phage system associated protein QatB;protein_id=WP_308051045.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 27909 29282 . + . ID=gene-LDO45_RS02850;Name=qatC;gbkey=Gene;gene=qatC;gene_biotype=protein_coding;locus_tag=LDO45_RS02850;old_locus_tag=BDI4_1080044 NZ_CAJZAS010000011.1 Protein Homology CDS 27909 29282 . + 0 ID=cds-WP_223959734.1;Parent=gene-LDO45_RS02850;Dbxref=GenBank:WP_223959734.1;Name=WP_223959734.1;Ontology_term=GO:0051607;gbkey=CDS;gene=qatC;go_process=defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016448857.1;locus_tag=LDO45_RS02850;product=Qat anti-phage system QueC-like protein QatC;protein_id=WP_223959734.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 29291 30058 . + . ID=gene-LDO45_RS02855;Name=qatD;gbkey=Gene;gene=qatD;gene_biotype=protein_coding;locus_tag=LDO45_RS02855;old_locus_tag=BDI4_1080046 NZ_CAJZAS010000011.1 Protein Homology CDS 29291 30058 . + 0 ID=cds-WP_223959742.1;Parent=gene-LDO45_RS02855;Dbxref=GenBank:WP_223959742.1;Name=WP_223959742.1;Ontology_term=GO:0051607;gbkey=CDS;gene=qatD;go_process=defense response to virus|0051607||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011516217.1;locus_tag=LDO45_RS02855;product=Qat anti-phage system TatD family nuclease QatD;protein_id=WP_223959742.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 30124 30381 . + . ID=gene-LDO45_RS02860;Name=LDO45_RS02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02860;old_locus_tag=BDI4_1080047 NZ_CAJZAS010000011.1 Protein Homology CDS 30124 30381 . + 0 ID=cds-WP_223959744.1;Parent=gene-LDO45_RS02860;Dbxref=GenBank:WP_223959744.1;Name=WP_223959744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018311887.1;locus_tag=LDO45_RS02860;product=hypothetical protein;protein_id=WP_223959744.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 30555 31277 . + . ID=gene-LDO45_RS02865;Name=LDO45_RS02865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02865;old_locus_tag=BDI4_1080048 NZ_CAJZAS010000011.1 GeneMarkS-2+ CDS 30555 31277 . + 0 ID=cds-WP_223959746.1;Parent=gene-LDO45_RS02865;Dbxref=GenBank:WP_223959746.1;Name=WP_223959746.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS02865;product=hypothetical protein;protein_id=WP_223959746.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq pseudogene 31569 31699 . + . ID=gene-LDO45_RS02870;Name=LDO45_RS02870;end_range=31699,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS02870;partial=true;pseudo=true;start_range=.,31569 NZ_CAJZAS010000011.1 Protein Homology CDS 31569 31699 . + 0 ID=cds-LDO45_RS02870;Parent=gene-LDO45_RS02870;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=31699,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003103166.1;locus_tag=LDO45_RS02870;partial=true;product=DUF2958 domain-containing protein;pseudo=true;start_range=.,31569;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 31776 32627 . - . ID=gene-LDO45_RS02875;Name=LDO45_RS02875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02875;old_locus_tag=BDI4_1080051 NZ_CAJZAS010000011.1 GeneMarkS-2+ CDS 31776 32627 . - 0 ID=cds-WP_223959748.1;Parent=gene-LDO45_RS02875;Dbxref=GenBank:WP_223959748.1;Name=WP_223959748.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS02875;product=hypothetical protein;protein_id=WP_223959748.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq pseudogene 32707 32829 . + . ID=gene-LDO45_RS02880;Name=LDO45_RS02880;end_range=32829,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS02880;partial=true;pseudo=true;start_range=.,32707 NZ_CAJZAS010000011.1 Protein Homology CDS 32707 32829 . + 0 ID=cds-LDO45_RS02880;Parent=gene-LDO45_RS02880;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=32829,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012638432.1;locus_tag=LDO45_RS02880;partial=true;product=DUF932 domain-containing protein;pseudo=true;start_range=.,32707;transl_table=11 NZ_CAJZAS010000011.1 RefSeq pseudogene 32861 33022 . + . ID=gene-LDO45_RS02885;Name=LDO45_RS02885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS02885;old_locus_tag=BDI4_1080052;partial=true;pseudo=true;start_range=.,32861 NZ_CAJZAS010000011.1 Protein Homology CDS 32861 33022 . + 0 ID=cds-LDO45_RS02885;Parent=gene-LDO45_RS02885;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018914322.1;locus_tag=LDO45_RS02885;partial=true;product=DUF2274 domain-containing protein;pseudo=true;start_range=.,32861;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 33019 33738 . - . ID=gene-LDO45_RS02890;Name=LDO45_RS02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02890;old_locus_tag=BDI4_1080053 NZ_CAJZAS010000011.1 GeneMarkS-2+ CDS 33019 33738 . - 0 ID=cds-WP_223959755.1;Parent=gene-LDO45_RS02890;Dbxref=GenBank:WP_223959755.1;Name=WP_223959755.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS02890;product=competence protein CoiA;protein_id=WP_223959755.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 33754 37260 . - . ID=gene-LDO45_RS02895;Name=LDO45_RS02895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02895;old_locus_tag=BDI4_1080054 NZ_CAJZAS010000011.1 Protein Homology CDS 33754 37260 . - 0 ID=cds-WP_223959757.1;Parent=gene-LDO45_RS02895;Dbxref=GenBank:WP_223959757.1;Name=WP_223959757.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012492.5;locus_tag=LDO45_RS02895;product=DEAD/DEAH box helicase;protein_id=WP_223959757.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 37247 38029 . - . ID=gene-LDO45_RS02900;Name=LDO45_RS02900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02900;old_locus_tag=BDI4_1080055 NZ_CAJZAS010000011.1 Protein Homology CDS 37247 38029 . - 0 ID=cds-WP_223959760.1;Parent=gene-LDO45_RS02900;Dbxref=GenBank:WP_223959760.1;Name=WP_223959760.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020452.5;locus_tag=LDO45_RS02900;product=DUF1837 domain-containing protein;protein_id=WP_223959760.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 38330 39187 . - . ID=gene-LDO45_RS02905;Name=LDO45_RS02905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02905;old_locus_tag=BDI4_1080056 NZ_CAJZAS010000011.1 GeneMarkS-2+ CDS 38330 39187 . - 0 ID=cds-WP_223959768.1;Parent=gene-LDO45_RS02905;Dbxref=GenBank:WP_223959768.1;Name=WP_223959768.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS02905;product=hypothetical protein;protein_id=WP_223959768.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 39328 40713 . - . ID=gene-LDO45_RS02910;Name=LDO45_RS02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02910;old_locus_tag=BDI4_1080057 NZ_CAJZAS010000011.1 Protein Homology CDS 39328 40713 . - 0 ID=cds-WP_223959770.1;Parent=gene-LDO45_RS02910;Dbxref=GenBank:WP_223959770.1;Name=WP_223959770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020832773.1;locus_tag=LDO45_RS02910;product=integrase family protein;protein_id=WP_223959770.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 41261 41641 . + . ID=gene-LDO45_RS02920;Name=LDO45_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02920;old_locus_tag=BDI4_1080059 NZ_CAJZAS010000011.1 GeneMarkS-2+ CDS 41261 41641 . + 0 ID=cds-WP_223959772.1;Parent=gene-LDO45_RS02920;Dbxref=GenBank:WP_223959772.1;Name=WP_223959772.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS02920;product=hypothetical protein;protein_id=WP_223959772.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 41655 42659 . - . ID=gene-LDO45_RS02925;Name=LDO45_RS02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02925;old_locus_tag=BDI4_1080060 NZ_CAJZAS010000011.1 Protein Homology CDS 41655 42659 . - 0 ID=cds-WP_223959774.1;Parent=gene-LDO45_RS02925;Dbxref=GenBank:WP_223959774.1;Name=WP_223959774.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482428.1;locus_tag=LDO45_RS02925;product=IS110 family transposase;protein_id=WP_223959774.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 42809 43201 . - . ID=gene-LDO45_RS34180;Name=LDO45_RS34180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34180;old_locus_tag=BDI4_1080061 NZ_CAJZAS010000011.1 Protein Homology CDS 42809 43201 . - 0 ID=cds-WP_374109506.1;Parent=gene-LDO45_RS34180;Dbxref=GenBank:WP_374109506.1;Name=WP_374109506.1;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: protein motif:HMM:NF013677.5;locus_tag=LDO45_RS34180;product=transposase;protein_id=WP_374109506.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 43645 44193 . + . ID=gene-LDO45_RS02935;Name=LDO45_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02935;old_locus_tag=BDI4_1080062 NZ_CAJZAS010000011.1 Protein Homology CDS 43645 44193 . + 0 ID=cds-WP_223959783.1;Parent=gene-LDO45_RS02935;Dbxref=GenBank:WP_223959783.1;Name=WP_223959783.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690664.1;locus_tag=LDO45_RS02935;product=fimbrial protein;protein_id=WP_223959783.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 44294 45067 . + . ID=gene-LDO45_RS02940;Name=LDO45_RS02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02940;old_locus_tag=BDI4_1080063 NZ_CAJZAS010000011.1 Protein Homology CDS 44294 45067 . + 0 ID=cds-WP_223959786.1;Parent=gene-LDO45_RS02940;Dbxref=GenBank:WP_223959786.1;Name=WP_223959786.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008646217.1;locus_tag=LDO45_RS02940;product=fimbria/pilus periplasmic chaperone;protein_id=WP_223959786.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 45139 47766 . + . ID=gene-LDO45_RS02945;Name=LDO45_RS02945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02945;old_locus_tag=BDI4_1080064 NZ_CAJZAS010000011.1 Protein Homology CDS 45139 47766 . + 0 ID=cds-WP_223959794.1;Parent=gene-LDO45_RS02945;Dbxref=GenBank:WP_223959794.1;Name=WP_223959794.1;Ontology_term=GO:0009297,GO:0015473;gbkey=CDS;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690662.1;locus_tag=LDO45_RS02945;product=fimbria/pilus outer membrane usher protein;protein_id=WP_223959794.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 47754 48932 . + . ID=gene-LDO45_RS02950;Name=LDO45_RS02950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02950;old_locus_tag=BDI4_1080065 NZ_CAJZAS010000011.1 Protein Homology CDS 47754 48932 . + 0 ID=cds-WP_223959796.1;Parent=gene-LDO45_RS02950;Dbxref=GenBank:WP_223959796.1;Name=WP_223959796.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690661.1;locus_tag=LDO45_RS02950;product=fimbrial protein;protein_id=WP_223959796.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 49316 49885 . + . ID=gene-LDO45_RS02955;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=LDO45_RS02955;old_locus_tag=BDI4_1080067 NZ_CAJZAS010000011.1 Protein Homology CDS 49316 49885 . + 0 ID=cds-WP_374109507.1;Parent=gene-LDO45_RS02955;Dbxref=GenBank:WP_374109507.1;Name=WP_374109507.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889057.1;locus_tag=LDO45_RS02955;product=LPS assembly lipoprotein LptE;protein_id=WP_374109507.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq pseudogene 50683 51438 . - . ID=gene-LDO45_RS02960;Name=LDO45_RS02960;end_range=51438,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS02960;old_locus_tag=BDI4_1080069;partial=true;pseudo=true NZ_CAJZAS010000011.1 Protein Homology CDS 50683 51438 . - 0 ID=cds-LDO45_RS02960;Parent=gene-LDO45_RS02960;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;end_range=51438,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611469.1;locus_tag=LDO45_RS02960;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CAJZAS010000011.1 RefSeq pseudogene 51523 51957 . + . ID=gene-LDO45_RS02965;Name=LDO45_RS02965;end_range=51957,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS02965;old_locus_tag=BDI4_1080070;partial=true;pseudo=true NZ_CAJZAS010000011.1 Protein Homology CDS 51523 51957 . + 0 ID=cds-LDO45_RS02965;Parent=gene-LDO45_RS02965;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=51957,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017476.5;locus_tag=LDO45_RS02965;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 52055 52603 . + . ID=gene-LDO45_RS02970;Name=LDO45_RS02970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02970;old_locus_tag=BDI4_1080071 NZ_CAJZAS010000011.1 Protein Homology CDS 52055 52603 . + 0 ID=cds-WP_223959798.1;Parent=gene-LDO45_RS02970;Dbxref=GenBank:WP_223959798.1;Name=WP_223959798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184792.1;locus_tag=LDO45_RS02970;product=YadA-like family protein;protein_id=WP_223959798.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 52775 52903 . + . ID=gene-LDO45_RS34185;Name=LDO45_RS34185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34185 NZ_CAJZAS010000011.1 GeneMarkS-2+ CDS 52775 52903 . + 0 ID=cds-WP_290370988.1;Parent=gene-LDO45_RS34185;Dbxref=GenBank:WP_290370988.1;Name=WP_290370988.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34185;product=hypothetical protein;protein_id=WP_290370988.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 53345 54004 . + . ID=gene-LDO45_RS02975;Name=LDO45_RS02975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02975;old_locus_tag=BDI4_1080072 NZ_CAJZAS010000011.1 Protein Homology CDS 53345 54004 . + 0 ID=cds-WP_223959807.1;Parent=gene-LDO45_RS02975;Dbxref=GenBank:WP_223959807.1;Name=WP_223959807.1;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761771.1;locus_tag=LDO45_RS02975;product=carbonic anhydrase;protein_id=WP_223959807.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 54065 54535 . + . ID=gene-LDO45_RS02980;Name=cynS;gbkey=Gene;gene=cynS;gene_biotype=protein_coding;locus_tag=LDO45_RS02980;old_locus_tag=BDI4_1080073 NZ_CAJZAS010000011.1 Protein Homology CDS 54065 54535 . + 0 ID=cds-WP_223959809.1;Parent=gene-LDO45_RS02980;Dbxref=GenBank:WP_223959809.1;Name=WP_223959809.1;Ontology_term=GO:0009439,GO:0008824;gbkey=CDS;gene=cynS;go_function=cyanate hydratase activity|0008824||IEA;go_process=cyanate metabolic process|0009439||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020204195.1;locus_tag=LDO45_RS02980;product=cyanase;protein_id=WP_223959809.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq pseudogene 54624 54911 . + . ID=gene-LDO45_RS02985;Name=LDO45_RS02985;end_range=54911,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS02985;partial=true;pseudo=true NZ_CAJZAS010000011.1 Protein Homology CDS 54624 54911 . + 0 ID=cds-LDO45_RS02985;Parent=gene-LDO45_RS02985;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=54911,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018437286.1;locus_tag=LDO45_RS02985;partial=true;product=DUF1348 family protein;pseudo=true;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 55481 56368 . - . ID=gene-LDO45_RS02990;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=LDO45_RS02990;old_locus_tag=BDI4_1080077 NZ_CAJZAS010000011.1 Protein Homology CDS 55481 56368 . - 0 ID=cds-WP_223959811.1;Parent=gene-LDO45_RS02990;Dbxref=GenBank:WP_223959811.1;Name=WP_223959811.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cynR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880171.1;locus_tag=LDO45_RS02990;product=transcriptional regulator CynR;protein_id=WP_223959811.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 56504 56785 . + . ID=gene-LDO45_RS02995;Name=LDO45_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS02995;old_locus_tag=BDI4_1080079 NZ_CAJZAS010000011.1 GeneMarkS-2+ CDS 56504 56785 . + 0 ID=cds-WP_223959813.1;Parent=gene-LDO45_RS02995;Dbxref=GenBank:WP_223959813.1;Name=WP_223959813.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS02995;product=hypothetical protein;protein_id=WP_223959813.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 56822 57109 . + . ID=gene-LDO45_RS03000;Name=LDO45_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03000;old_locus_tag=BDI4_1080080 NZ_CAJZAS010000011.1 GeneMarkS-2+ CDS 56822 57109 . + 0 ID=cds-WP_223959815.1;Parent=gene-LDO45_RS03000;Dbxref=GenBank:WP_223959815.1;Name=WP_223959815.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS03000;product=hypothetical protein;protein_id=WP_223959815.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 57804 58166 . - . ID=gene-LDO45_RS03005;Name=LDO45_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03005 NZ_CAJZAS010000011.1 Protein Homology CDS 57804 58166 . - 0 ID=cds-WP_223959823.1;Parent=gene-LDO45_RS03005;Dbxref=GenBank:WP_223959823.1;Name=WP_223959823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016832101.1;locus_tag=LDO45_RS03005;product=hypothetical protein;protein_id=WP_223959823.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 58775 59128 . - . ID=gene-LDO45_RS03010;Name=LDO45_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03010;old_locus_tag=BDI4_1080086 NZ_CAJZAS010000011.1 GeneMarkS-2+ CDS 58775 59128 . - 0 ID=cds-WP_223959825.1;Parent=gene-LDO45_RS03010;Dbxref=GenBank:WP_223959825.1;Name=WP_223959825.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS03010;product=hypothetical protein;protein_id=WP_223959825.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 59131 67890 . + . ID=gene-LDO45_RS03015;Name=LDO45_RS03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03015;old_locus_tag=BDI4_1080087 NZ_CAJZAS010000011.1 Protein Homology CDS 59131 67890 . + 0 ID=cds-WP_223959834.1;Parent=gene-LDO45_RS03015;Dbxref=GenBank:WP_223959834.1;Name=WP_223959834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014619054.1;locus_tag=LDO45_RS03015;product=hemagglutinin repeat-containing protein;protein_id=WP_223959834.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 67887 68459 . + . ID=gene-LDO45_RS03020;Name=LDO45_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03020;old_locus_tag=BDI4_1080088 NZ_CAJZAS010000011.1 Protein Homology CDS 67887 68459 . + 0 ID=cds-WP_223959836.1;Parent=gene-LDO45_RS03020;Dbxref=GenBank:WP_223959836.1;Name=WP_223959836.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019408.5;locus_tag=LDO45_RS03020;product=imm11 family protein;protein_id=WP_223959836.1;transl_table=11 NZ_CAJZAS010000011.1 RefSeq gene 68475 69004 . + . ID=gene-LDO45_RS03025;Name=LDO45_RS03025;end_range=69004,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03025;partial=true NZ_CAJZAS010000011.1 Protein Homology CDS 68475 69004 . + 0 ID=cds-WP_290370989.1;Parent=gene-LDO45_RS03025;Dbxref=GenBank:WP_290370989.1;Name=WP_290370989.1;end_range=69004,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004548975.1;locus_tag=LDO45_RS03025;partial=true;product=POTRA domain-containing protein;protein_id=WP_290370989.1;transl_table=11 ##sequence-region NZ_CAJZAS010000012.1 1 24869 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000012.1 RefSeq region 1 24869 . + . ID=NZ_CAJZAS010000012.1:1..24869;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_109 NZ_CAJZAS010000012.1 RefSeq pseudogene 1 2194 . + . ID=gene-LDO45_RS03030;Name=LDO45_RS03030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS03030;old_locus_tag=BDI4_1090001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000012.1 Protein Homology CDS 1 2194 . + 0 ID=cds-LDO45_RS03030;Parent=gene-LDO45_RS03030;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0030979,GO:0004553,GO:0016758;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,hexosyltransferase activity|0016758||IEA;go_process=alpha-glucan biosynthetic process|0030979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498311.1;locus_tag=LDO45_RS03030;partial=true;product=alpha-1%2C4-glucan--maltose-1-phosphate maltosyltransferase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000012.1 RefSeq gene 2194 5604 . + . ID=gene-LDO45_RS03035;Name=treS;gbkey=Gene;gene=treS;gene_biotype=protein_coding;locus_tag=LDO45_RS03035;old_locus_tag=BDI4_1090002 NZ_CAJZAS010000012.1 Protein Homology CDS 2194 5604 . + 0 ID=cds-WP_223959877.1;Parent=gene-LDO45_RS03035;Dbxref=GenBank:WP_223959877.1;Name=WP_223959877.1;Ontology_term=GO:0005991,GO:0047471;gbkey=CDS;gene=treS;go_function=maltose alpha-D-glucosyltransferase activity|0047471||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879950.1;locus_tag=LDO45_RS03035;product=maltose alpha-D-glucosyltransferase;protein_id=WP_223959877.1;transl_table=11 NZ_CAJZAS010000012.1 RefSeq gene 5601 7802 . + . ID=gene-LDO45_RS03040;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=LDO45_RS03040;old_locus_tag=BDI4_1090003 NZ_CAJZAS010000012.1 Protein Homology CDS 5601 7802 . + 0 ID=cds-WP_223959841.1;Parent=gene-LDO45_RS03040;Dbxref=GenBank:WP_223959841.1;Name=WP_223959841.1;Ontology_term=GO:0005975,GO:0005978,GO:0003844,GO:0004553,GO:0043169;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521799.1;locus_tag=LDO45_RS03040;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=WP_223959841.1;transl_table=11 NZ_CAJZAS010000012.1 RefSeq gene 7835 9949 . + . ID=gene-LDO45_RS03045;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=LDO45_RS03045;old_locus_tag=BDI4_1090004 NZ_CAJZAS010000012.1 Protein Homology CDS 7835 9949 . + 0 ID=cds-WP_223959843.1;Parent=gene-LDO45_RS03045;Dbxref=GenBank:WP_223959843.1;Name=WP_223959843.1;Ontology_term=GO:0005980,GO:0004133,GO:0004553;gbkey=CDS;gene=glgX;go_function=glycogen debranching enzyme activity|0004133||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372640.1;locus_tag=LDO45_RS03045;product=glycogen debranching protein GlgX;protein_id=WP_223959843.1;transl_table=11 NZ_CAJZAS010000012.1 RefSeq gene 9959 11830 . + . ID=gene-LDO45_RS03050;Name=treZ;gbkey=Gene;gene=treZ;gene_biotype=protein_coding;locus_tag=LDO45_RS03050;old_locus_tag=BDI4_1090005 NZ_CAJZAS010000012.1 Protein Homology CDS 9959 11830 . + 0 ID=cds-WP_223959845.1;Parent=gene-LDO45_RS03050;Dbxref=GenBank:WP_223959845.1;Name=WP_223959845.1;Ontology_term=GO:0005992,GO:0033942;gbkey=CDS;gene=treZ;go_function=4-alpha-D-(1->4)-alpha-D-glucanotrehalose trehalohydrolase activity|0033942||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767354.1;locus_tag=LDO45_RS03050;product=malto-oligosyltrehalose trehalohydrolase;protein_id=WP_223959845.1;transl_table=11 NZ_CAJZAS010000012.1 RefSeq gene 11827 14115 . + . ID=gene-LDO45_RS03055;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=LDO45_RS03055;old_locus_tag=BDI4_1090006 NZ_CAJZAS010000012.1 Protein Homology CDS 11827 14115 . + 0 ID=cds-WP_223959848.1;Parent=gene-LDO45_RS03055;Dbxref=GenBank:WP_223959848.1;Name=WP_223959848.1;Ontology_term=GO:0005980,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660501.1;locus_tag=LDO45_RS03055;product=4-alpha-glucanotransferase;protein_id=WP_223959848.1;transl_table=11 NZ_CAJZAS010000012.1 RefSeq gene 14112 16877 . + . ID=gene-LDO45_RS03060;Name=treY;gbkey=Gene;gene=treY;gene_biotype=protein_coding;locus_tag=LDO45_RS03060;old_locus_tag=BDI4_1090007 NZ_CAJZAS010000012.1 Protein Homology CDS 14112 16877 . + 0 ID=cds-WP_223959855.1;Parent=gene-LDO45_RS03060;Dbxref=GenBank:WP_223959855.1;Name=WP_223959855.1;Ontology_term=GO:0005992,GO:0047470;gbkey=CDS;gene=treY;go_function=(1%2C4)-alpha-D-glucan 1-alpha-D-glucosylmutase activity|0047470||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725714.1;locus_tag=LDO45_RS03060;product=malto-oligosyltrehalose synthase;protein_id=WP_223959855.1;transl_table=11 NZ_CAJZAS010000012.1 RefSeq gene 16960 17682 . - . ID=gene-LDO45_RS03065;Name=arsH;gbkey=Gene;gene=arsH;gene_biotype=protein_coding;locus_tag=LDO45_RS03065;old_locus_tag=BDI4_1090008 NZ_CAJZAS010000012.1 Protein Homology CDS 16960 17682 . - 0 ID=cds-WP_059536933.1;Parent=gene-LDO45_RS03065;Dbxref=GenBank:WP_059536933.1;Name=WP_059536933.1;Ontology_term=GO:0046685;gbkey=CDS;gene=arsH;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372644.1;locus_tag=LDO45_RS03065;product=arsenical resistance protein ArsH;protein_id=WP_059536933.1;transl_table=11 NZ_CAJZAS010000012.1 RefSeq gene 17703 18773 . - . ID=gene-LDO45_RS03070;Name=arsB;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=LDO45_RS03070;old_locus_tag=BDI4_1090009 NZ_CAJZAS010000012.1 Protein Homology CDS 17703 18773 . - 0 ID=cds-WP_223959858.1;Parent=gene-LDO45_RS03070;Dbxref=GenBank:WP_223959858.1;Name=WP_223959858.1;Ontology_term=GO:0015700,GO:0046685,GO:0008490,GO:0015103,GO:0015297,GO:0016020;gbkey=CDS;gene=arsB;go_component=membrane|0016020||IEA;go_function=arsenite secondary active transmembrane transporter activity|0008490||IEA,inorganic anion transmembrane transporter activity|0015103||IEA,antiporter activity|0015297||IEA;go_process=arsenite transport|0015700||IEA,response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330935.1;locus_tag=LDO45_RS03070;product=ACR3 family arsenite efflux transporter;protein_id=WP_223959858.1;transl_table=11 NZ_CAJZAS010000012.1 RefSeq gene 18840 19334 . - . ID=gene-LDO45_RS03075;Name=LDO45_RS03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03075;old_locus_tag=BDI4_1090010 NZ_CAJZAS010000012.1 Protein Homology CDS 18840 19334 . - 0 ID=cds-WP_223959860.1;Parent=gene-LDO45_RS03075;Dbxref=GenBank:WP_223959860.1;Name=WP_223959860.1;Ontology_term=GO:0030612;gbkey=CDS;go_function=arsenate reductase (thioredoxin) activity|0030612||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525399.1;locus_tag=LDO45_RS03075;product=arsenate reductase ArsC;protein_id=WP_223959860.1;transl_table=11 NZ_CAJZAS010000012.1 RefSeq gene 19357 19692 . - . ID=gene-LDO45_RS03080;Name=LDO45_RS03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03080;old_locus_tag=BDI4_1090011 NZ_CAJZAS010000012.1 Protein Homology CDS 19357 19692 . - 0 ID=cds-WP_223959861.1;Parent=gene-LDO45_RS03080;Dbxref=GenBank:WP_223959861.1;Name=WP_223959861.1;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761671.1;locus_tag=LDO45_RS03080;product=helix-turn-helix transcriptional regulator;protein_id=WP_223959861.1;transl_table=11 NZ_CAJZAS010000012.1 RefSeq gene 19855 21066 . + . ID=gene-LDO45_RS03085;Name=LDO45_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03085;old_locus_tag=BDI4_1090012 NZ_CAJZAS010000012.1 Protein Homology CDS 19855 21066 . + 0 ID=cds-WP_223959863.1;Parent=gene-LDO45_RS03085;Dbxref=GenBank:WP_223959863.1;Name=WP_223959863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482081.1;locus_tag=LDO45_RS03085;product=MBL fold metallo-hydrolase;protein_id=WP_223959863.1;transl_table=11 NZ_CAJZAS010000012.1 RefSeq gene 21106 21357 . - . ID=gene-LDO45_RS03090;Name=LDO45_RS03090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03090;old_locus_tag=BDI4_1090013 NZ_CAJZAS010000012.1 Protein Homology CDS 21106 21357 . - 0 ID=cds-WP_223959865.1;Parent=gene-LDO45_RS03090;Dbxref=GenBank:WP_223959865.1;Name=WP_223959865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879889.1;locus_tag=LDO45_RS03090;product=hypothetical protein;protein_id=WP_223959865.1;transl_table=11 NZ_CAJZAS010000012.1 RefSeq gene 21476 22726 . + . ID=gene-LDO45_RS03095;Name=LDO45_RS03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03095;old_locus_tag=BDI4_1090014 NZ_CAJZAS010000012.1 Protein Homology CDS 21476 22726 . + 0 ID=cds-WP_059536947.1;Parent=gene-LDO45_RS03095;Dbxref=GenBank:WP_059536947.1;Name=WP_059536947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398950.1;locus_tag=LDO45_RS03095;product=phosphatidylserine decarboxylase family protein;protein_id=WP_059536947.1;transl_table=11 NZ_CAJZAS010000012.1 RefSeq gene 22775 22999 . - . ID=gene-LDO45_RS03100;Name=LDO45_RS03100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03100;old_locus_tag=BDI4_1090015 NZ_CAJZAS010000012.1 Protein Homology CDS 22775 22999 . - 0 ID=cds-WP_059536949.1;Parent=gene-LDO45_RS03100;Dbxref=GenBank:WP_059536949.1;Name=WP_059536949.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217893.1;locus_tag=LDO45_RS03100;product=hypothetical protein;protein_id=WP_059536949.1;transl_table=11 NZ_CAJZAS010000012.1 RefSeq gene 23262 23603 . - . ID=gene-LDO45_RS03105;Name=LDO45_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03105;old_locus_tag=BDI4_1090017 NZ_CAJZAS010000012.1 Protein Homology CDS 23262 23603 . - 0 ID=cds-WP_059536951.1;Parent=gene-LDO45_RS03105;Dbxref=GenBank:WP_059536951.1;Name=WP_059536951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761778.1;locus_tag=LDO45_RS03105;product=DUF1488 domain-containing protein;protein_id=WP_059536951.1;transl_table=11 NZ_CAJZAS010000012.1 RefSeq gene 23607 24155 . - . ID=gene-LDO45_RS03110;Name=LDO45_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03110;old_locus_tag=BDI4_1090018 NZ_CAJZAS010000012.1 Protein Homology CDS 23607 24155 . - 0 ID=cds-WP_059700812.1;Parent=gene-LDO45_RS03110;Dbxref=GenBank:WP_059700812.1;Name=WP_059700812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690098.1;locus_tag=LDO45_RS03110;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_059700812.1;transl_table=11 NZ_CAJZAS010000012.1 RefSeq gene 24430 24795 . - . ID=gene-LDO45_RS03115;Name=LDO45_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03115;old_locus_tag=BDI4_1090019 NZ_CAJZAS010000012.1 Protein Homology CDS 24430 24795 . - 0 ID=cds-WP_223959867.1;Parent=gene-LDO45_RS03115;Dbxref=GenBank:WP_223959867.1;Name=WP_223959867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498323.1;locus_tag=LDO45_RS03115;product=DUF3022 domain-containing protein;protein_id=WP_223959867.1;transl_table=11 ##sequence-region NZ_CAJZAS010000013.1 1 25156 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000013.1 RefSeq region 1 25156 . + . ID=NZ_CAJZAS010000013.1:1..25156;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_11 NZ_CAJZAS010000013.1 RefSeq gene 147 4346 . + . ID=gene-LDO45_RS03120;Name=LDO45_RS03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03120;old_locus_tag=BDI4_110001 NZ_CAJZAS010000013.1 Protein Homology CDS 147 4346 . + 0 ID=cds-WP_223959887.1;Parent=gene-LDO45_RS03120;Dbxref=GenBank:WP_223959887.1;Name=WP_223959887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752728.1;locus_tag=LDO45_RS03120;product=YhdP family protein;protein_id=WP_223959887.1;transl_table=11 NZ_CAJZAS010000013.1 RefSeq gene 4398 5225 . + . ID=gene-LDO45_RS03125;Name=LDO45_RS03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03125;old_locus_tag=BDI4_110002 NZ_CAJZAS010000013.1 Protein Homology CDS 4398 5225 . + 0 ID=cds-WP_059535399.1;Parent=gene-LDO45_RS03125;Dbxref=GenBank:WP_059535399.1;Name=WP_059535399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883340.1;locus_tag=LDO45_RS03125;product=carbon-nitrogen hydrolase family protein;protein_id=WP_059535399.1;transl_table=11 NZ_CAJZAS010000013.1 RefSeq gene 5319 6785 . + . ID=gene-LDO45_RS03130;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=LDO45_RS03130;old_locus_tag=BDI4_110003 NZ_CAJZAS010000013.1 Protein Homology CDS 5319 6785 . + 0 ID=cds-WP_059451318.1;Parent=gene-LDO45_RS03130;Dbxref=GenBank:WP_059451318.1;Name=WP_059451318.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012431786.1;locus_tag=LDO45_RS03130;product=metalloprotease TldD;protein_id=WP_059451318.1;transl_table=11 NZ_CAJZAS010000013.1 RefSeq gene 6896 7141 . - . ID=gene-LDO45_RS03135;Name=LDO45_RS03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03135;old_locus_tag=BDI4_110004 NZ_CAJZAS010000013.1 GeneMarkS-2+ CDS 6896 7141 . - 0 ID=cds-WP_223959896.1;Parent=gene-LDO45_RS03135;Dbxref=GenBank:WP_223959896.1;Name=WP_223959896.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS03135;product=hypothetical protein;protein_id=WP_223959896.1;transl_table=11 NZ_CAJZAS010000013.1 RefSeq gene 7184 8257 . + . ID=gene-LDO45_RS03140;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=LDO45_RS03140;old_locus_tag=BDI4_110005 NZ_CAJZAS010000013.1 Protein Homology CDS 7184 8257 . + 0 ID=cds-WP_059465445.1;Parent=gene-LDO45_RS03140;Dbxref=GenBank:WP_059465445.1;Name=WP_059465445.1;Ontology_term=GO:0009073,GO:0003849;gbkey=CDS;gene=aroG;go_function=3-deoxy-7-phosphoheptulonate synthase activity|0003849||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013587169.1;locus_tag=LDO45_RS03140;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_059465445.1;transl_table=11 NZ_CAJZAS010000013.1 RefSeq gene 8363 9571 . - . ID=gene-LDO45_RS03145;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=LDO45_RS03145;old_locus_tag=BDI4_110006 NZ_CAJZAS010000013.1 Protein Homology CDS 8363 9571 . - 0 ID=cds-WP_223959898.1;Parent=gene-LDO45_RS03145;Dbxref=GenBank:WP_223959898.1;Name=WP_223959898.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106227.1;locus_tag=LDO45_RS03145;product=NO-inducible flavohemoprotein;protein_id=WP_223959898.1;transl_table=11 NZ_CAJZAS010000013.1 RefSeq gene 9669 10220 . - . ID=gene-LDO45_RS03150;Name=LDO45_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03150;old_locus_tag=BDI4_110007 NZ_CAJZAS010000013.1 Protein Homology CDS 9669 10220 . - 0 ID=cds-WP_059535394.1;Parent=gene-LDO45_RS03150;Dbxref=GenBank:WP_059535394.1;Name=WP_059535394.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544630.1;locus_tag=LDO45_RS03150;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_059535394.1;transl_table=11 NZ_CAJZAS010000013.1 RefSeq gene 10361 11770 . + . ID=gene-LDO45_RS03155;Name=LDO45_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03155;old_locus_tag=BDI4_110008 NZ_CAJZAS010000013.1 Protein Homology CDS 10361 11770 . + 0 ID=cds-WP_223959900.1;Parent=gene-LDO45_RS03155;Dbxref=GenBank:WP_223959900.1;Name=WP_223959900.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656021.1;locus_tag=LDO45_RS03155;product=FAD-binding oxidoreductase;protein_id=WP_223959900.1;transl_table=11 NZ_CAJZAS010000013.1 RefSeq gene 11809 13302 . + . ID=gene-LDO45_RS03160;Name=LDO45_RS03160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03160;old_locus_tag=BDI4_110009 NZ_CAJZAS010000013.1 Protein Homology CDS 11809 13302 . + 0 ID=cds-WP_223959909.1;Parent=gene-LDO45_RS03160;Dbxref=GenBank:WP_223959909.1;Name=WP_223959909.1;Ontology_term=GO:0003824,GO:0050660;gbkey=CDS;go_function=catalytic activity|0003824||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009913510.1;locus_tag=LDO45_RS03160;product=FAD-linked oxidase C-terminal domain-containing protein;protein_id=WP_223959909.1;transl_table=11 NZ_CAJZAS010000013.1 RefSeq gene 13445 14533 . + . ID=gene-LDO45_RS03165;Name=glcE;gbkey=Gene;gene=glcE;gene_biotype=protein_coding;locus_tag=LDO45_RS03165;old_locus_tag=BDI4_110010 NZ_CAJZAS010000013.1 Protein Homology CDS 13445 14533 . + 0 ID=cds-WP_059689051.1;Parent=gene-LDO45_RS03165;Dbxref=GenBank:WP_059689051.1;Name=WP_059689051.1;Ontology_term=GO:0016491,GO:0071949;gbkey=CDS;gene=glcE;go_function=oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333241.1;locus_tag=LDO45_RS03165;product=glycolate oxidase subunit GlcE;protein_id=WP_059689051.1;transl_table=11 NZ_CAJZAS010000013.1 RefSeq gene 14541 15767 . + . ID=gene-LDO45_RS03170;Name=glcF;gbkey=Gene;gene=glcF;gene_biotype=protein_coding;locus_tag=LDO45_RS03170;old_locus_tag=BDI4_110011 NZ_CAJZAS010000013.1 Protein Homology CDS 14541 15767 . + 0 ID=cds-WP_059535389.1;Parent=gene-LDO45_RS03170;Dbxref=GenBank:WP_059535389.1;Name=WP_059535389.1;Ontology_term=GO:0051536;gbkey=CDS;gene=glcF;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194146.1;locus_tag=LDO45_RS03170;product=glycolate oxidase subunit GlcF;protein_id=WP_059535389.1;transl_table=11 NZ_CAJZAS010000013.1 RefSeq gene 15885 16583 . + . ID=gene-LDO45_RS03175;Name=LDO45_RS03175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03175;old_locus_tag=BDI4_110012 NZ_CAJZAS010000013.1 Protein Homology CDS 15885 16583 . + 0 ID=cds-WP_059535387.1;Parent=gene-LDO45_RS03175;Dbxref=GenBank:WP_059535387.1;Name=WP_059535387.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363137.1;locus_tag=LDO45_RS03175;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_059535387.1;transl_table=11 NZ_CAJZAS010000013.1 RefSeq gene 16634 17446 . + . ID=gene-LDO45_RS03180;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=LDO45_RS03180;old_locus_tag=BDI4_110013 NZ_CAJZAS010000013.1 Protein Homology CDS 16634 17446 . + 0 ID=cds-WP_059689053.1;Parent=gene-LDO45_RS03180;Dbxref=GenBank:WP_059689053.1;Name=WP_059689053.1;Ontology_term=GO:0006561,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004550016.1;locus_tag=LDO45_RS03180;product=pyrroline-5-carboxylate reductase;protein_id=WP_059689053.1;transl_table=11 NZ_CAJZAS010000013.1 RefSeq gene 17543 18415 . - . ID=gene-LDO45_RS03185;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=LDO45_RS03185;old_locus_tag=BDI4_110014 NZ_CAJZAS010000013.1 Protein Homology CDS 17543 18415 . - 0 ID=cds-WP_223959911.1;Parent=gene-LDO45_RS03185;Dbxref=GenBank:WP_223959911.1;Name=WP_223959911.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate octaprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656015.1;locus_tag=LDO45_RS03185;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_223959911.1;transl_table=11 NZ_CAJZAS010000013.1 RefSeq gene 18677 19165 . - . ID=gene-LDO45_RS03190;Name=dpsA;gbkey=Gene;gene=dpsA;gene_biotype=protein_coding;locus_tag=LDO45_RS03190;old_locus_tag=BDI4_110016 NZ_CAJZAS010000013.1 Protein Homology CDS 18677 19165 . - 0 ID=cds-WP_059465436.1;Parent=gene-LDO45_RS03190;Dbxref=GenBank:WP_059465436.1;Name=WP_059465436.1;gbkey=CDS;gene=dpsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200519.1;locus_tag=LDO45_RS03190;product=non-specific DNA-binding protein DpsA;protein_id=WP_059465436.1;transl_table=11 NZ_CAJZAS010000013.1 RefSeq gene 19285 19440 . - . ID=gene-LDO45_RS03195;Name=LDO45_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03195;old_locus_tag=BDI4_110017 NZ_CAJZAS010000013.1 Protein Homology CDS 19285 19440 . - 0 ID=cds-WP_223959919.1;Parent=gene-LDO45_RS03195;Dbxref=GenBank:WP_223959919.1;Name=WP_223959919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656013.1;locus_tag=LDO45_RS03195;product=hypothetical protein;protein_id=WP_223959919.1;transl_table=11 NZ_CAJZAS010000013.1 RefSeq gene 19540 21726 . - . ID=gene-LDO45_RS03200;Name=katG;gbkey=Gene;gene=katG;gene_biotype=protein_coding;locus_tag=LDO45_RS03200;old_locus_tag=BDI4_110018 NZ_CAJZAS010000013.1 Protein Homology CDS 19540 21726 . - 0 ID=cds-WP_223959930.1;Parent=gene-LDO45_RS03200;Dbxref=GenBank:WP_223959930.1;Name=WP_223959930.1;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327929.1;locus_tag=LDO45_RS03200;product=catalase/peroxidase HPI;protein_id=WP_223959930.1;transl_table=11 NZ_CAJZAS010000013.1 RefSeq gene 22268 23227 . - . ID=gene-LDO45_RS03205;Name=LDO45_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03205;old_locus_tag=BDI4_110019 NZ_CAJZAS010000013.1 Protein Homology CDS 22268 23227 . - 0 ID=cds-WP_059535381.1;Parent=gene-LDO45_RS03205;Dbxref=GenBank:WP_059535381.1;Name=WP_059535381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333233.1;locus_tag=LDO45_RS03205;product=hydrogen peroxide-inducible genes activator;protein_id=WP_059535381.1;transl_table=11 NZ_CAJZAS010000013.1 RefSeq gene 23365 25156 . - . ID=gene-LDO45_RS03210;Name=recG;end_range=25156,.;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=LDO45_RS03210;old_locus_tag=BDI4_110020;partial=true NZ_CAJZAS010000013.1 Protein Homology CDS 23365 25156 . - 1 ID=cds-WP_223959932.1;Parent=gene-LDO45_RS03210;Dbxref=GenBank:WP_223959932.1;Name=WP_223959932.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678;end_range=25156,.;gbkey=CDS;gene=recG;go_function=DNA helicase activity|0003678||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760054.1;locus_tag=LDO45_RS03210;partial=true;product=ATP-dependent DNA helicase RecG;protein_id=WP_223959932.1;transl_table=11 ##sequence-region NZ_CAJZAS010000014.1 1 15511 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000014.1 RefSeq region 1 15511 . + . ID=NZ_CAJZAS010000014.1:1..15511;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_110 NZ_CAJZAS010000014.1 RefSeq gene 1 211 . - . ID=gene-LDO45_RS03215;Name=LDO45_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03215;partial=true;start_range=.,1 NZ_CAJZAS010000014.1 Protein Homology CDS 1 211 . - 0 ID=cds-WP_223959934.1;Parent=gene-LDO45_RS03215;Dbxref=GenBank:WP_223959934.1;Name=WP_223959934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656580.1;locus_tag=LDO45_RS03215;partial=true;product=hypothetical protein;protein_id=WP_223959934.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000014.1 RefSeq gene 717 1739 . + . ID=gene-LDO45_RS03220;Name=LDO45_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03220;old_locus_tag=BDI4_1100003 NZ_CAJZAS010000014.1 Protein Homology CDS 717 1739 . + 0 ID=cds-WP_223959942.1;Parent=gene-LDO45_RS03220;Dbxref=GenBank:WP_223959942.1;Name=WP_223959942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755849.1;locus_tag=LDO45_RS03220;product=sensor domain-containing diguanylate cyclase;protein_id=WP_223959942.1;transl_table=11 NZ_CAJZAS010000014.1 RefSeq gene 1788 2240 . - . ID=gene-LDO45_RS03225;Name=LDO45_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03225;old_locus_tag=BDI4_1100004 NZ_CAJZAS010000014.1 Protein Homology CDS 1788 2240 . - 0 ID=cds-WP_223959950.1;Parent=gene-LDO45_RS03225;Dbxref=GenBank:WP_223959950.1;Name=WP_223959950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328304.1;locus_tag=LDO45_RS03225;product=hypothetical protein;protein_id=WP_223959950.1;transl_table=11 NZ_CAJZAS010000014.1 RefSeq gene 2240 3649 . - . ID=gene-LDO45_RS03230;Name=LDO45_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03230;old_locus_tag=BDI4_1100005 NZ_CAJZAS010000014.1 Protein Homology CDS 2240 3649 . - 0 ID=cds-WP_223959959.1;Parent=gene-LDO45_RS03230;Dbxref=GenBank:WP_223959959.1;Name=WP_223959959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897327.1;locus_tag=LDO45_RS03230;product=phosphatase PAP2/dual specificity phosphatase family protein;protein_id=WP_223959959.1;transl_table=11 NZ_CAJZAS010000014.1 RefSeq gene 3646 5415 . - . ID=gene-LDO45_RS03235;Name=LDO45_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03235;old_locus_tag=BDI4_1100006 NZ_CAJZAS010000014.1 Protein Homology CDS 3646 5415 . - 0 ID=cds-WP_223959961.1;Parent=gene-LDO45_RS03235;Dbxref=GenBank:WP_223959961.1;Name=WP_223959961.1;Ontology_term=GO:0008168,GO:0016787,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,hydrolase activity|0016787||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351686.1;locus_tag=LDO45_RS03235;product=bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase;protein_id=WP_223959961.1;transl_table=11 NZ_CAJZAS010000014.1 RefSeq gene 5484 6089 . - . ID=gene-LDO45_RS03240;Name=LDO45_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03240;old_locus_tag=BDI4_1100007 NZ_CAJZAS010000014.1 Protein Homology CDS 5484 6089 . - 0 ID=cds-WP_059691206.1;Parent=gene-LDO45_RS03240;Dbxref=GenBank:WP_059691206.1;Name=WP_059691206.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332730.1;locus_tag=LDO45_RS03240;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_059691206.1;transl_table=11 NZ_CAJZAS010000014.1 RefSeq gene 6173 6310 . + . ID=gene-LDO45_RS03245;Name=LDO45_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03245 NZ_CAJZAS010000014.1 GeneMarkS-2+ CDS 6173 6310 . + 0 ID=cds-WP_223959963.1;Parent=gene-LDO45_RS03245;Dbxref=GenBank:WP_223959963.1;Name=WP_223959963.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS03245;product=hypothetical protein;protein_id=WP_223959963.1;transl_table=11 NZ_CAJZAS010000014.1 RefSeq gene 6542 7174 . + . ID=gene-LDO45_RS03250;Name=LDO45_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03250;old_locus_tag=BDI4_1100009 NZ_CAJZAS010000014.1 Protein Homology CDS 6542 7174 . + 0 ID=cds-WP_059523822.1;Parent=gene-LDO45_RS03250;Dbxref=GenBank:WP_059523822.1;Name=WP_059523822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481857.1;locus_tag=LDO45_RS03250;product=lysophospholipid acyltransferase family protein;protein_id=WP_059523822.1;transl_table=11 NZ_CAJZAS010000014.1 RefSeq gene 7211 8140 . + . ID=gene-LDO45_RS03255;Name=LDO45_RS03255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03255;old_locus_tag=BDI4_1100010 NZ_CAJZAS010000014.1 Protein Homology CDS 7211 8140 . + 0 ID=cds-WP_059691205.1;Parent=gene-LDO45_RS03255;Dbxref=GenBank:WP_059691205.1;Name=WP_059691205.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332728.1;locus_tag=LDO45_RS03255;product=phosphatidate cytidylyltransferase;protein_id=WP_059691205.1;transl_table=11 NZ_CAJZAS010000014.1 RefSeq gene 8268 8579 . - . ID=gene-LDO45_RS03260;Name=LDO45_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03260;old_locus_tag=BDI4_1100011 NZ_CAJZAS010000014.1 Protein Homology CDS 8268 8579 . - 0 ID=cds-WP_223959972.1;Parent=gene-LDO45_RS03260;Dbxref=GenBank:WP_223959972.1;Name=WP_223959972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351678.1;locus_tag=LDO45_RS03260;product=hypothetical protein;protein_id=WP_223959972.1;transl_table=11 NZ_CAJZAS010000014.1 RefSeq gene 8579 9940 . - . ID=gene-LDO45_RS03265;Name=LDO45_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03265;old_locus_tag=BDI4_1100012 NZ_CAJZAS010000014.1 Protein Homology CDS 8579 9940 . - 0 ID=cds-WP_223959974.1;Parent=gene-LDO45_RS03265;Dbxref=GenBank:WP_223959974.1;Name=WP_223959974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897336.1;locus_tag=LDO45_RS03265;product=acyclic terpene utilization AtuA family protein;protein_id=WP_223959974.1;transl_table=11 NZ_CAJZAS010000014.1 RefSeq gene 9979 11277 . - . ID=gene-LDO45_RS03270;Name=LDO45_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03270;old_locus_tag=BDI4_1100013 NZ_CAJZAS010000014.1 Protein Homology CDS 9979 11277 . - 0 ID=cds-WP_059523350.1;Parent=gene-LDO45_RS03270;Dbxref=GenBank:WP_059523350.1;Name=WP_059523350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476273.1;locus_tag=LDO45_RS03270;product=CitMHS family transporter;protein_id=WP_059523350.1;transl_table=11 NZ_CAJZAS010000014.1 RefSeq gene 11375 12271 . + . ID=gene-LDO45_RS03275;Name=LDO45_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03275;old_locus_tag=BDI4_1100014 NZ_CAJZAS010000014.1 Protein Homology CDS 11375 12271 . + 0 ID=cds-WP_223959976.1;Parent=gene-LDO45_RS03275;Dbxref=GenBank:WP_223959976.1;Name=WP_223959976.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757181.1;locus_tag=LDO45_RS03275;product=LysR family transcriptional regulator;protein_id=WP_223959976.1;transl_table=11 NZ_CAJZAS010000014.1 RefSeq gene 12312 12905 . - . ID=gene-LDO45_RS03280;Name=LDO45_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03280;old_locus_tag=BDI4_1100015 NZ_CAJZAS010000014.1 Protein Homology CDS 12312 12905 . - 0 ID=cds-WP_059700620.1;Parent=gene-LDO45_RS03280;Dbxref=GenBank:WP_059700620.1;Name=WP_059700620.1;Ontology_term=GO:0010181,GO:0016646;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on the CH-NH group of donors%2C NAD or NADP as acceptor|0016646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328294.1;locus_tag=LDO45_RS03280;product=flavin reductase family protein;protein_id=WP_059700620.1;transl_table=11 NZ_CAJZAS010000014.1 RefSeq gene 13324 14484 . + . ID=gene-LDO45_RS03285;Name=LDO45_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03285;old_locus_tag=BDI4_1100016 NZ_CAJZAS010000014.1 Protein Homology CDS 13324 14484 . + 0 ID=cds-WP_059815511.1;Parent=gene-LDO45_RS03285;Dbxref=GenBank:WP_059815511.1;Name=WP_059815511.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884367.1;locus_tag=LDO45_RS03285;product=porin;protein_id=WP_059815511.1;transl_table=11 NZ_CAJZAS010000014.1 RefSeq pseudogene 14906 15511 . + . ID=gene-LDO45_RS03290;Name=LDO45_RS03290;end_range=15511,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS03290;partial=true;pseudo=true NZ_CAJZAS010000014.1 Protein Homology CDS 14906 15511 . + 0 ID=cds-LDO45_RS03290;Parent=gene-LDO45_RS03290;Note=too many ambiguous residues%3B incomplete%3B missing C-terminus;end_range=15511,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490616.1;locus_tag=LDO45_RS03290;partial=true;product=lytic transglycosylase domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000015.1 1 3297 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000015.1 RefSeq region 1 3297 . + . ID=NZ_CAJZAS010000015.1:1..3297;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_111 NZ_CAJZAS010000015.1 RefSeq pseudogene 1 337 . + . ID=gene-LDO45_RS03295;Name=LDO45_RS03295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS03295;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000015.1 Protein Homology CDS 1 337 . + 1 ID=cds-LDO45_RS03295;Parent=gene-LDO45_RS03295;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365754.1;locus_tag=LDO45_RS03295;partial=true;product=Flp pilus assembly protein CpaB;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000015.1 RefSeq gene 392 1774 . + . ID=gene-LDO45_RS03300;Name=LDO45_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03300;old_locus_tag=BDI4_1110002 NZ_CAJZAS010000015.1 Protein Homology CDS 392 1774 . + 0 ID=cds-WP_223959979.1;Parent=gene-LDO45_RS03300;Dbxref=GenBank:WP_223959979.1;Name=WP_223959979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658448.1;locus_tag=LDO45_RS03300;product=type II and III secretion system protein family protein;protein_id=WP_223959979.1;transl_table=11 NZ_CAJZAS010000015.1 RefSeq gene 1787 2170 . + . ID=gene-LDO45_RS03305;Name=LDO45_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03305;old_locus_tag=BDI4_1110003 NZ_CAJZAS010000015.1 Protein Homology CDS 1787 2170 . + 0 ID=cds-WP_059524851.1;Parent=gene-LDO45_RS03305;Dbxref=GenBank:WP_059524851.1;Name=WP_059524851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329850.1;locus_tag=LDO45_RS03305;product=CpaD family pilus assembly lipoprotein;protein_id=WP_059524851.1;transl_table=11 NZ_CAJZAS010000015.1 RefSeq gene 2193 3297 . + . ID=gene-LDO45_RS03310;Name=LDO45_RS03310;end_range=3297,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03310;partial=true NZ_CAJZAS010000015.1 Protein Homology CDS 2193 3297 . + 0 ID=cds-WP_223959981.1;Parent=gene-LDO45_RS03310;Dbxref=GenBank:WP_223959981.1;Name=WP_223959981.1;end_range=3297,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365756.1;locus_tag=LDO45_RS03310;partial=true;product=AAA family ATPase;protein_id=WP_223959981.1;transl_table=11 ##sequence-region NZ_CAJZAS010000016.1 1 50270 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000016.1 RefSeq region 1 50270 . + . ID=NZ_CAJZAS010000016.1:1..50270;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_112 NZ_CAJZAS010000016.1 RefSeq gene 1 661 . - . ID=gene-LDO45_RS03315;Name=LDO45_RS03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03315;partial=true;start_range=.,1 NZ_CAJZAS010000016.1 Protein Homology CDS 1 661 . - 0 ID=cds-WP_223959983.1;Parent=gene-LDO45_RS03315;Dbxref=GenBank:WP_223959983.1;Name=WP_223959983.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365963.1;locus_tag=LDO45_RS03315;partial=true;product=TolC family protein;protein_id=WP_223959983.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 672 1826 . - . ID=gene-LDO45_RS03320;Name=LDO45_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03320;old_locus_tag=BDI4_1120002 NZ_CAJZAS010000016.1 Protein Homology CDS 672 1826 . - 0 ID=cds-WP_059689987.1;Parent=gene-LDO45_RS03320;Dbxref=GenBank:WP_059689987.1;Name=WP_059689987.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658706.1;locus_tag=LDO45_RS03320;product=ABC transporter permease;protein_id=WP_059689987.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 1823 2794 . - . ID=gene-LDO45_RS03325;Name=LDO45_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03325;old_locus_tag=BDI4_1120003 NZ_CAJZAS010000016.1 Protein Homology CDS 1823 2794 . - 0 ID=cds-WP_223959985.1;Parent=gene-LDO45_RS03325;Dbxref=GenBank:WP_223959985.1;Name=WP_223959985.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658707.1;locus_tag=LDO45_RS03325;product=ABC transporter ATP-binding protein;protein_id=WP_223959985.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 2791 3759 . - . ID=gene-LDO45_RS03330;Name=LDO45_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03330;old_locus_tag=BDI4_1120004 NZ_CAJZAS010000016.1 Protein Homology CDS 2791 3759 . - 0 ID=cds-WP_223959987.1;Parent=gene-LDO45_RS03330;Dbxref=GenBank:WP_223959987.1;Name=WP_223959987.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012249500.1;locus_tag=LDO45_RS03330;product=HlyD family secretion protein;protein_id=WP_223959987.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 3756 4454 . - . ID=gene-LDO45_RS03335;Name=LDO45_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03335;old_locus_tag=BDI4_1120005 NZ_CAJZAS010000016.1 Protein Homology CDS 3756 4454 . - 0 ID=cds-WP_223959989.1;Parent=gene-LDO45_RS03335;Dbxref=GenBank:WP_223959989.1;Name=WP_223959989.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755639.1;locus_tag=LDO45_RS03335;product=TetR/AcrR family transcriptional regulator;protein_id=WP_223959989.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 4710 5132 . - . ID=gene-LDO45_RS03340;Name=LDO45_RS03340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03340;old_locus_tag=BDI4_1120006 NZ_CAJZAS010000016.1 Protein Homology CDS 4710 5132 . - 0 ID=cds-WP_223959990.1;Parent=gene-LDO45_RS03340;Dbxref=GenBank:WP_223959990.1;Name=WP_223959990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217057.1;locus_tag=LDO45_RS03340;product=cupin domain-containing protein;protein_id=WP_223959990.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 5146 5583 . - . ID=gene-LDO45_RS03345;Name=LDO45_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03345;old_locus_tag=BDI4_1120007 NZ_CAJZAS010000016.1 Protein Homology CDS 5146 5583 . - 0 ID=cds-WP_059525262.1;Parent=gene-LDO45_RS03345;Dbxref=GenBank:WP_059525262.1;Name=WP_059525262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099649.1;locus_tag=LDO45_RS03345;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_059525262.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 5679 7160 . - . ID=gene-LDO45_RS03350;Name=LDO45_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03350;old_locus_tag=BDI4_1120008 NZ_CAJZAS010000016.1 Protein Homology CDS 5679 7160 . - 0 ID=cds-WP_223959992.1;Parent=gene-LDO45_RS03350;Dbxref=GenBank:WP_223959992.1;Name=WP_223959992.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485811.1;locus_tag=LDO45_RS03350;product=PLP-dependent aminotransferase family protein;protein_id=WP_223959992.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 7322 8239 . + . ID=gene-LDO45_RS03355;Name=LDO45_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03355;old_locus_tag=BDI4_1120009 NZ_CAJZAS010000016.1 Protein Homology CDS 7322 8239 . + 0 ID=cds-WP_223959994.1;Parent=gene-LDO45_RS03355;Dbxref=GenBank:WP_223959994.1;Name=WP_223959994.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365969.1;locus_tag=LDO45_RS03355;product=LysR family transcriptional regulator;protein_id=WP_223959994.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 8386 9135 . + . ID=gene-LDO45_RS03360;Name=LDO45_RS03360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03360;old_locus_tag=BDI4_1120010 NZ_CAJZAS010000016.1 Protein Homology CDS 8386 9135 . + 0 ID=cds-WP_059819009.1;Parent=gene-LDO45_RS03360;Dbxref=GenBank:WP_059819009.1;Name=WP_059819009.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338255.1;locus_tag=LDO45_RS03360;product=SDR family oxidoreductase;protein_id=WP_059819009.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 9207 10862 . - . ID=gene-LDO45_RS03365;Name=LDO45_RS03365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03365;old_locus_tag=BDI4_1120011 NZ_CAJZAS010000016.1 Protein Homology CDS 9207 10862 . - 0 ID=cds-WP_223959997.1;Parent=gene-LDO45_RS03365;Dbxref=GenBank:WP_223959997.1;Name=WP_223959997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479139.1;locus_tag=LDO45_RS03365;product=glycoside hydrolase family 32 protein;protein_id=WP_223959997.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 11029 12615 . - . ID=gene-LDO45_RS03370;Name=LDO45_RS03370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03370;old_locus_tag=BDI4_1120012 NZ_CAJZAS010000016.1 Protein Homology CDS 11029 12615 . - 0 ID=cds-WP_223959999.1;Parent=gene-LDO45_RS03370;Dbxref=GenBank:WP_223959999.1;Name=WP_223959999.1;Ontology_term=GO:0009758,GO:0050053;gbkey=CDS;go_function=levansucrase activity|0050053||IEA;go_process=carbohydrate utilization|0009758||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658715.1;locus_tag=LDO45_RS03370;product=glycoside hydrolase family 68 protein;protein_id=WP_223959999.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 12784 13818 . + . ID=gene-LDO45_RS03375;Name=LDO45_RS03375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03375;old_locus_tag=BDI4_1120013 NZ_CAJZAS010000016.1 Protein Homology CDS 12784 13818 . + 0 ID=cds-WP_223960001.1;Parent=gene-LDO45_RS03375;Dbxref=GenBank:WP_223960001.1;Name=WP_223960001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758279.1;locus_tag=LDO45_RS03375;product=substrate-binding domain-containing protein;protein_id=WP_223960001.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 14233 14919 . + . ID=gene-LDO45_RS03380;Name=LDO45_RS03380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03380;old_locus_tag=BDI4_1120015 NZ_CAJZAS010000016.1 Protein Homology CDS 14233 14919 . + 0 ID=cds-WP_059525276.1;Parent=gene-LDO45_RS03380;Dbxref=GenBank:WP_059525276.1;Name=WP_059525276.1;Ontology_term=GO:0019172;gbkey=CDS;go_function=glyoxalase III activity|0019172||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397181.1;locus_tag=LDO45_RS03380;product=type 1 glutamine amidotransferase domain-containing protein;protein_id=WP_059525276.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 15064 16173 . + . ID=gene-LDO45_RS03385;Name=LDO45_RS03385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03385;old_locus_tag=BDI4_1120016 NZ_CAJZAS010000016.1 Protein Homology CDS 15064 16173 . + 0 ID=cds-WP_223960003.1;Parent=gene-LDO45_RS03385;Dbxref=GenBank:WP_223960003.1;Name=WP_223960003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494940.1;locus_tag=LDO45_RS03385;product=NADH:flavin oxidoreductase/NADH oxidase;protein_id=WP_223960003.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 16335 17405 . + . ID=gene-LDO45_RS03390;Name=LDO45_RS03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03390;old_locus_tag=BDI4_1120017 NZ_CAJZAS010000016.1 Protein Homology CDS 16335 17405 . + 0 ID=cds-WP_223960005.1;Parent=gene-LDO45_RS03390;Dbxref=GenBank:WP_223960005.1;Name=WP_223960005.1;Ontology_term=GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485660.1;locus_tag=LDO45_RS03390;product=AI-2E family transporter;protein_id=WP_223960005.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 17629 18003 . + . ID=gene-LDO45_RS03395;Name=LDO45_RS03395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03395;old_locus_tag=BDI4_1120019 NZ_CAJZAS010000016.1 Protein Homology CDS 17629 18003 . + 0 ID=cds-WP_223960008.1;Parent=gene-LDO45_RS03395;Dbxref=GenBank:WP_223960008.1;Name=WP_223960008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494939.1;locus_tag=LDO45_RS03395;product=hypothetical protein;protein_id=WP_223960008.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 18043 18837 . - . ID=gene-LDO45_RS03400;Name=LDO45_RS03400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03400;old_locus_tag=BDI4_1120020 NZ_CAJZAS010000016.1 Protein Homology CDS 18043 18837 . - 0 ID=cds-WP_059690000.1;Parent=gene-LDO45_RS03400;Dbxref=GenBank:WP_059690000.1;Name=WP_059690000.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603553.1;locus_tag=LDO45_RS03400;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_059690000.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 19515 22013 . + . ID=gene-LDO45_RS03405;Name=LDO45_RS03405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03405;old_locus_tag=BDI4_1120023 NZ_CAJZAS010000016.1 Protein Homology CDS 19515 22013 . + 0 ID=cds-WP_223960013.1;Parent=gene-LDO45_RS03405;Dbxref=GenBank:WP_223960013.1;Name=WP_223960013.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:TIGR01646.1;locus_tag=LDO45_RS03405;product=type VI secretion system Vgr family protein;protein_id=WP_223960013.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 22034 24376 . + . ID=gene-LDO45_RS03410;Name=LDO45_RS03410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03410;old_locus_tag=BDI4_1120024 NZ_CAJZAS010000016.1 GeneMarkS-2+ CDS 22034 24376 . + 0 ID=cds-WP_223960015.1;Parent=gene-LDO45_RS03410;Dbxref=GenBank:WP_223960015.1;Name=WP_223960015.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS03410;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_223960015.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 24340 25029 . + . ID=gene-LDO45_RS03415;Name=LDO45_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03415;old_locus_tag=BDI4_1120025 NZ_CAJZAS010000016.1 GeneMarkS-2+ CDS 24340 25029 . + 0 ID=cds-WP_223960017.1;Parent=gene-LDO45_RS03415;Dbxref=GenBank:WP_223960017.1;Name=WP_223960017.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS03415;product=hypothetical protein;protein_id=WP_223960017.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 24971 25408 . + . ID=gene-LDO45_RS34470;Name=LDO45_RS34470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34470;old_locus_tag=BDI4_1120026 NZ_CAJZAS010000016.1 Protein Homology CDS 24971 25408 . + 0 ID=cds-WP_223960025.1;Parent=gene-LDO45_RS34470;Dbxref=GenBank:WP_223960025.1;Name=WP_223960025.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021611.5;locus_tag=LDO45_RS34470;product=DUF2345 domain-containing protein;protein_id=WP_223960025.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 25476 26177 . + . ID=gene-LDO45_RS03425;Name=LDO45_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03425;old_locus_tag=BDI4_1120028 NZ_CAJZAS010000016.1 GeneMarkS-2+ CDS 25476 26177 . + 0 ID=cds-WP_223960027.1;Parent=gene-LDO45_RS03425;Dbxref=GenBank:WP_223960027.1;Name=WP_223960027.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS03425;product=hypothetical protein;protein_id=WP_223960027.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 26119 26649 . + . ID=gene-LDO45_RS34475;Name=LDO45_RS34475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34475;old_locus_tag=BDI4_1120029 NZ_CAJZAS010000016.1 GeneMarkS-2+ CDS 26119 26649 . + 0 ID=cds-WP_290370990.1;Parent=gene-LDO45_RS34475;Dbxref=GenBank:WP_290370990.1;Name=WP_290370990.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34475;product=hypothetical protein;protein_id=WP_290370990.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 27309 27866 . + . ID=gene-LDO45_RS03435;Name=LDO45_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03435;old_locus_tag=BDI4_1120032 NZ_CAJZAS010000016.1 GeneMarkS-2+ CDS 27309 27866 . + 0 ID=cds-WP_223960051.1;Parent=gene-LDO45_RS03435;Dbxref=GenBank:WP_223960051.1;Name=WP_223960051.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS03435;product=hypothetical protein;protein_id=WP_223960051.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 27859 28035 . + . ID=gene-LDO45_RS03440;Name=LDO45_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03440;old_locus_tag=BDI4_1120033 NZ_CAJZAS010000016.1 GeneMarkS-2+ CDS 27859 28035 . + 0 ID=cds-WP_223960053.1;Parent=gene-LDO45_RS03440;Dbxref=GenBank:WP_223960053.1;Name=WP_223960053.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS03440;product=hypothetical protein;protein_id=WP_223960053.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 28032 28733 . + . ID=gene-LDO45_RS03445;Name=LDO45_RS03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03445;old_locus_tag=BDI4_1120034 NZ_CAJZAS010000016.1 GeneMarkS-2+ CDS 28032 28733 . + 0 ID=cds-WP_223960055.1;Parent=gene-LDO45_RS03445;Dbxref=GenBank:WP_223960055.1;Name=WP_223960055.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS03445;product=hypothetical protein;protein_id=WP_223960055.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 28846 30084 . + . ID=gene-LDO45_RS03450;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=LDO45_RS03450;old_locus_tag=BDI4_1120035 NZ_CAJZAS010000016.1 Protein Homology CDS 28846 30084 . + 0 ID=cds-WP_223960057.1;Parent=gene-LDO45_RS03450;Dbxref=GenBank:WP_223960057.1;Name=WP_223960057.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssL;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:NF005999.0;locus_tag=LDO45_RS03450;product=type VI secretion system protein TssL%2C long form;protein_id=WP_223960057.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 30408 31256 . + . ID=gene-LDO45_RS03455;Name=LDO45_RS03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03455;old_locus_tag=BDI4_1120037 NZ_CAJZAS010000016.1 Protein Homology CDS 30408 31256 . + 0 ID=cds-WP_223960059.1;Parent=gene-LDO45_RS03455;Dbxref=GenBank:WP_223960059.1;Name=WP_223960059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755616.1;locus_tag=LDO45_RS03455;product=AraC family transcriptional regulator;protein_id=WP_223960059.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 31356 31961 . - . ID=gene-LDO45_RS03460;Name=LDO45_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03460;old_locus_tag=BDI4_1120038 NZ_CAJZAS010000016.1 Protein Homology CDS 31356 31961 . - 0 ID=cds-WP_059690219.1;Parent=gene-LDO45_RS03460;Dbxref=GenBank:WP_059690219.1;Name=WP_059690219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403632.1;locus_tag=LDO45_RS03460;product=LysE family translocator;protein_id=WP_059690219.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 32056 33513 . - . ID=gene-LDO45_RS03465;Name=LDO45_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03465;old_locus_tag=BDI4_1120040 NZ_CAJZAS010000016.1 Protein Homology CDS 32056 33513 . - 0 ID=cds-WP_223960061.1;Parent=gene-LDO45_RS03465;Dbxref=GenBank:WP_223960061.1;Name=WP_223960061.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547792.1;locus_tag=LDO45_RS03465;product=heavy metal sensor histidine kinase;protein_id=WP_223960061.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 33510 34205 . - . ID=gene-LDO45_RS03470;Name=LDO45_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03470;old_locus_tag=BDI4_1120041 NZ_CAJZAS010000016.1 Protein Homology CDS 33510 34205 . - 0 ID=cds-WP_059450219.1;Parent=gene-LDO45_RS03470;Dbxref=GenBank:WP_059450219.1;Name=WP_059450219.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882131.1;locus_tag=LDO45_RS03470;product=heavy metal response regulator transcription factor;protein_id=WP_059450219.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 34227 35732 . - . ID=gene-LDO45_RS03475;Name=LDO45_RS03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03475;old_locus_tag=BDI4_1120042 NZ_CAJZAS010000016.1 Protein Homology CDS 34227 35732 . - 0 ID=cds-WP_223960073.1;Parent=gene-LDO45_RS03475;Dbxref=GenBank:WP_223960073.1;Name=WP_223960073.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547790.1;locus_tag=LDO45_RS03475;product=efflux transporter outer membrane subunit;protein_id=WP_223960073.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 35738 36970 . - . ID=gene-LDO45_RS03480;Name=LDO45_RS03480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03480;old_locus_tag=BDI4_1120043 NZ_CAJZAS010000016.1 Protein Homology CDS 35738 36970 . - 0 ID=cds-WP_059690007.1;Parent=gene-LDO45_RS03480;Dbxref=GenBank:WP_059690007.1;Name=WP_059690007.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658725.1;locus_tag=LDO45_RS03480;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_059690007.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 37004 40171 . - . ID=gene-LDO45_RS03485;Name=LDO45_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03485;old_locus_tag=BDI4_1120044 NZ_CAJZAS010000016.1 Protein Homology CDS 37004 40171 . - 0 ID=cds-WP_223960063.1;Parent=gene-LDO45_RS03485;Dbxref=GenBank:WP_223960063.1;Name=WP_223960063.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492928.1;locus_tag=LDO45_RS03485;product=efflux RND transporter permease subunit;protein_id=WP_223960063.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 40400 41167 . - . ID=gene-LDO45_RS03490;Name=LDO45_RS03490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03490;old_locus_tag=BDI4_1120046 NZ_CAJZAS010000016.1 Protein Homology CDS 40400 41167 . - 0 ID=cds-WP_223960065.1;Parent=gene-LDO45_RS03490;Dbxref=GenBank:WP_223960065.1;Name=WP_223960065.1;Ontology_term=GO:0006355,GO:0003700,GO:0030552;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,cAMP binding|0030552||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760008.1;locus_tag=LDO45_RS03490;product=Crp/Fnr family transcriptional regulator;protein_id=WP_223960065.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 41336 42988 . + . ID=gene-LDO45_RS03495;Name=LDO45_RS03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03495;old_locus_tag=BDI4_1120045 NZ_CAJZAS010000016.1 Protein Homology CDS 41336 42988 . + 0 ID=cds-WP_059525296.1;Parent=gene-LDO45_RS03495;Dbxref=GenBank:WP_059525296.1;Name=WP_059525296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547786.1;locus_tag=LDO45_RS03495;product=acyl-CoA synthetase;protein_id=WP_059525296.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 43028 45010 . - . ID=gene-LDO45_RS03500;Name=LDO45_RS03500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03500;old_locus_tag=BDI4_1120047 NZ_CAJZAS010000016.1 Protein Homology CDS 43028 45010 . - 0 ID=cds-WP_223960067.1;Parent=gene-LDO45_RS03500;Dbxref=GenBank:WP_223960067.1;Name=WP_223960067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397154.1;locus_tag=LDO45_RS03500;product=methyl-accepting chemotaxis protein;protein_id=WP_223960067.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 45150 45581 . - . ID=gene-LDO45_RS03505;Name=LDO45_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03505;old_locus_tag=BDI4_1120048 NZ_CAJZAS010000016.1 Protein Homology CDS 45150 45581 . - 0 ID=cds-WP_059525300.1;Parent=gene-LDO45_RS03505;Dbxref=GenBank:WP_059525300.1;Name=WP_059525300.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481928.1;locus_tag=LDO45_RS03505;product=YqaA family protein;protein_id=WP_059525300.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 45619 46794 . - . ID=gene-LDO45_RS03510;Name=kch;gbkey=Gene;gene=kch;gene_biotype=protein_coding;locus_tag=LDO45_RS03510;old_locus_tag=BDI4_1120049 NZ_CAJZAS010000016.1 Protein Homology CDS 45619 46794 . - 0 ID=cds-WP_223960069.1;Parent=gene-LDO45_RS03510;Dbxref=GenBank:WP_223960069.1;Name=WP_223960069.1;gbkey=CDS;gene=kch;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338231.1;locus_tag=LDO45_RS03510;product=voltage-gated potassium channel protein;protein_id=WP_223960069.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 46919 47560 . - . ID=gene-LDO45_RS03515;Name=LDO45_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03515;old_locus_tag=BDI4_1120050 NZ_CAJZAS010000016.1 Protein Homology CDS 46919 47560 . - 0 ID=cds-WP_223960071.1;Parent=gene-LDO45_RS03515;Dbxref=GenBank:WP_223960071.1;Name=WP_223960071.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658731.1;locus_tag=LDO45_RS03515;product=LysE family translocator;protein_id=WP_223960071.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq gene 47846 48328 . + . ID=gene-LDO45_RS03520;Name=LDO45_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03520;old_locus_tag=BDI4_1120051 NZ_CAJZAS010000016.1 Protein Homology CDS 47846 48328 . + 0 ID=cds-WP_006755380.1;Parent=gene-LDO45_RS03520;Dbxref=GenBank:WP_006755380.1;Name=WP_006755380.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010098798.1;locus_tag=LDO45_RS03520;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_006755380.1;transl_table=11 NZ_CAJZAS010000016.1 RefSeq pseudogene 48973 50270 . - . ID=gene-LDO45_RS03525;Name=LDO45_RS03525;end_range=50270,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS03525;old_locus_tag=BDI4_1120052;partial=true;pseudo=true NZ_CAJZAS010000016.1 Protein Homology CDS 48973 50270 . - 0 ID=cds-LDO45_RS03525;Parent=gene-LDO45_RS03525;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing N-terminus;end_range=50270,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467913.1;locus_tag=LDO45_RS03525;partial=true;product=IclR family transcriptional regulator C-terminal domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000017.1 1 862 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000017.1 RefSeq region 1 862 . + . ID=NZ_CAJZAS010000017.1:1..862;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_113 NZ_CAJZAS010000017.1 RefSeq gene 1 851 . + . ID=gene-LDO45_RS03530;Name=LDO45_RS03530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03530;old_locus_tag=BDI4_1130001;partial=true;start_range=.,1 NZ_CAJZAS010000017.1 Protein Homology CDS 1 851 . + 2 ID=cds-WP_223960075.1;Parent=gene-LDO45_RS03530;Dbxref=GenBank:WP_223960075.1;Name=WP_223960075.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353446.1;locus_tag=LDO45_RS03530;partial=true;product=ABC transporter ATP-binding protein;protein_id=WP_223960075.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAS010000018.1 1 46009 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000018.1 RefSeq region 1 46009 . + . ID=NZ_CAJZAS010000018.1:1..46009;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_114 NZ_CAJZAS010000018.1 RefSeq gene 322 1233 . + . ID=gene-LDO45_RS03535;Name=LDO45_RS03535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03535;old_locus_tag=BDI4_1140001 NZ_CAJZAS010000018.1 Protein Homology CDS 322 1233 . + 0 ID=cds-WP_223960077.1;Parent=gene-LDO45_RS03535;Dbxref=GenBank:WP_223960077.1;Name=WP_223960077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545101.1;locus_tag=LDO45_RS03535;product=aldose epimerase;protein_id=WP_223960077.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 1370 2062 . + . ID=gene-LDO45_RS03540;Name=LDO45_RS03540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03540;old_locus_tag=BDI4_1140002 NZ_CAJZAS010000018.1 Protein Homology CDS 1370 2062 . + 0 ID=cds-WP_059691175.1;Parent=gene-LDO45_RS03540;Dbxref=GenBank:WP_059691175.1;Name=WP_059691175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417339.1;locus_tag=LDO45_RS03540;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_059691175.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 2143 2268 . - . ID=gene-LDO45_RS34195;Name=LDO45_RS34195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34195 NZ_CAJZAS010000018.1 GeneMarkS-2+ CDS 2143 2268 . - 0 ID=cds-WP_290370992.1;Parent=gene-LDO45_RS34195;Dbxref=GenBank:WP_290370992.1;Name=WP_290370992.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34195;product=hypothetical protein;protein_id=WP_290370992.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 2442 4061 . + . ID=gene-LDO45_RS03545;Name=LDO45_RS03545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03545;old_locus_tag=BDI4_1140003 NZ_CAJZAS010000018.1 Protein Homology CDS 2442 4061 . + 0 ID=cds-WP_059691174.1;Parent=gene-LDO45_RS03545;Dbxref=GenBank:WP_059691174.1;Name=WP_059691174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750330.1;locus_tag=LDO45_RS03545;product=acyl-CoA synthetase;protein_id=WP_059691174.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 4146 4472 . + . ID=gene-LDO45_RS03550;Name=LDO45_RS03550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03550;old_locus_tag=BDI4_1140005 NZ_CAJZAS010000018.1 Protein Homology CDS 4146 4472 . + 0 ID=cds-WP_059523428.1;Parent=gene-LDO45_RS03550;Dbxref=GenBank:WP_059523428.1;Name=WP_059523428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897410.1;locus_tag=LDO45_RS03550;product=DUF2288 domain-containing protein;protein_id=WP_059523428.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 4483 5853 . + . ID=gene-LDO45_RS03555;Name=LDO45_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03555;old_locus_tag=BDI4_1140004 NZ_CAJZAS010000018.1 Protein Homology CDS 4483 5853 . + 0 ID=cds-WP_223960079.1;Parent=gene-LDO45_RS03555;Dbxref=GenBank:WP_223960079.1;Name=WP_223960079.1;Ontology_term=GO:0006855,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092637.1;locus_tag=LDO45_RS03555;product=MATE family efflux transporter;protein_id=WP_223960079.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 5879 6064 . - . ID=gene-LDO45_RS03560;Name=LDO45_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03560;old_locus_tag=BDI4_1140006 NZ_CAJZAS010000018.1 Protein Homology CDS 5879 6064 . - 0 ID=cds-WP_223960081.1;Parent=gene-LDO45_RS03560;Dbxref=GenBank:WP_223960081.1;Name=WP_223960081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760196.1;locus_tag=LDO45_RS03560;product=hypothetical protein;protein_id=WP_223960081.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 6201 6371 . + . ID=gene-LDO45_RS03565;Name=LDO45_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03565;old_locus_tag=BDI4_1140007 NZ_CAJZAS010000018.1 Protein Homology CDS 6201 6371 . + 0 ID=cds-WP_162840567.1;Parent=gene-LDO45_RS03565;Dbxref=GenBank:WP_162840567.1;Name=WP_162840567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191316.1;locus_tag=LDO45_RS03565;product=hypothetical protein;protein_id=WP_162840567.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 6578 7384 . - . ID=gene-LDO45_RS03570;Name=LDO45_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03570;old_locus_tag=BDI4_1140008 NZ_CAJZAS010000018.1 Protein Homology CDS 6578 7384 . - 0 ID=cds-WP_059523434.1;Parent=gene-LDO45_RS03570;Dbxref=GenBank:WP_059523434.1;Name=WP_059523434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092640.1;locus_tag=LDO45_RS03570;product=GNAT family N-acetyltransferase;protein_id=WP_059523434.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 7544 8005 . - . ID=gene-LDO45_RS03575;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=LDO45_RS03575;old_locus_tag=BDI4_1140009 NZ_CAJZAS010000018.1 Protein Homology CDS 7544 8005 . - 0 ID=cds-WP_059523831.1;Parent=gene-LDO45_RS03575;Dbxref=GenBank:WP_059523831.1;Name=WP_059523831.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545096.1;locus_tag=LDO45_RS03575;product=phosphohistidine phosphatase SixA;protein_id=WP_059523831.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 8168 8244 . + . ID=gene-LDO45_RS03580;Name=LDO45_RS03580;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS03580;old_locus_tag=BDI4_TRNA27 NZ_CAJZAS010000018.1 tRNAscan-SE tRNA 8168 8244 . + . ID=rna-LDO45_RS03580;Parent=gene-LDO45_RS03580;anticodon=(pos:8202..8204);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS03580;product=tRNA-Pro NZ_CAJZAS010000018.1 tRNAscan-SE exon 8168 8244 . + . ID=exon-LDO45_RS03580-1;Parent=rna-LDO45_RS03580;anticodon=(pos:8202..8204);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS03580;product=tRNA-Pro NZ_CAJZAS010000018.1 RefSeq gene 8398 8838 . + . ID=gene-LDO45_RS03585;Name=LDO45_RS03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03585;old_locus_tag=BDI4_1140011 NZ_CAJZAS010000018.1 Protein Homology CDS 8398 8838 . + 0 ID=cds-WP_223960083.1;Parent=gene-LDO45_RS03585;Dbxref=GenBank:WP_223960083.1;Name=WP_223960083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750317.1;locus_tag=LDO45_RS03585;product=hypothetical protein;protein_id=WP_223960083.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 8891 10405 . - . ID=gene-LDO45_RS03590;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=LDO45_RS03590;old_locus_tag=BDI4_1140012 NZ_CAJZAS010000018.1 Protein Homology CDS 8891 10405 . - 0 ID=cds-WP_059523436.1;Parent=gene-LDO45_RS03590;Dbxref=GenBank:WP_059523436.1;Name=WP_059523436.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009970405.1;locus_tag=LDO45_RS03590;product=exopolyphosphatase;protein_id=WP_059523436.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 10685 12748 . + . ID=gene-LDO45_RS03595;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=LDO45_RS03595;old_locus_tag=BDI4_1140013 NZ_CAJZAS010000018.1 Protein Homology CDS 10685 12748 . + 0 ID=cds-WP_059523438.1;Parent=gene-LDO45_RS03595;Dbxref=GenBank:WP_059523438.1;Name=WP_059523438.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041492798.1;locus_tag=LDO45_RS03595;product=polyphosphate kinase 1;protein_id=WP_059523438.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 12869 14188 . - . ID=gene-LDO45_RS03600;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=LDO45_RS03600;old_locus_tag=BDI4_1140014 NZ_CAJZAS010000018.1 Protein Homology CDS 12869 14188 . - 0 ID=cds-WP_223960085.1;Parent=gene-LDO45_RS03600;Dbxref=GenBank:WP_223960085.1;Name=WP_223960085.1;Ontology_term=GO:0000160,GO:0006796,GO:0006817,GO:0000155;gbkey=CDS;gene=phoR;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphate-containing compound metabolic process|0006796||IEA,phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332665.1;locus_tag=LDO45_RS03600;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_223960085.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 14246 14947 . - . ID=gene-LDO45_RS03605;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=LDO45_RS03605;old_locus_tag=BDI4_1140015 NZ_CAJZAS010000018.1 Protein Homology CDS 14246 14947 . - 0 ID=cds-WP_006750313.1;Parent=gene-LDO45_RS03605;Dbxref=GenBank:WP_006750313.1;Name=WP_006750313.1;Ontology_term=GO:0000160,GO:0006355,GO:0006817,GO:0000156,GO:0003677;gbkey=CDS;gene=phoB;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332664.1;locus_tag=LDO45_RS03605;product=phosphate regulon transcriptional regulator PhoB;protein_id=WP_006750313.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 14978 15682 . - . ID=gene-LDO45_RS03610;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=LDO45_RS03610;old_locus_tag=BDI4_1140016 NZ_CAJZAS010000018.1 Protein Homology CDS 14978 15682 . - 0 ID=cds-WP_059523442.1;Parent=gene-LDO45_RS03610;Dbxref=GenBank:WP_059523442.1;Name=WP_059523442.1;Ontology_term=GO:0006817,GO:0030643,GO:0045936;gbkey=CDS;gene=phoU;go_process=phosphate ion transport|0006817||IEA,intracellular phosphate ion homeostasis|0030643||IEA,negative regulation of phosphate metabolic process|0045936||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351613.1;locus_tag=LDO45_RS03610;product=phosphate signaling complex protein PhoU;protein_id=WP_059523442.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 15701 16549 . - . ID=gene-LDO45_RS03615;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=LDO45_RS03615;old_locus_tag=BDI4_1140017 NZ_CAJZAS010000018.1 Protein Homology CDS 15701 16549 . - 0 ID=cds-WP_059815729.1;Parent=gene-LDO45_RS03615;Dbxref=GenBank:WP_059815729.1;Name=WP_059815729.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401039.1;locus_tag=LDO45_RS03615;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_059815729.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 16565 17458 . - . ID=gene-LDO45_RS03620;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=LDO45_RS03620;old_locus_tag=BDI4_1140018 NZ_CAJZAS010000018.1 Protein Homology CDS 16565 17458 . - 0 ID=cds-WP_223960087.1;Parent=gene-LDO45_RS03620;Dbxref=GenBank:WP_223960087.1;Name=WP_223960087.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906011.1;locus_tag=LDO45_RS03620;product=phosphate ABC transporter permease PstA;protein_id=WP_223960087.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 17455 18438 . - . ID=gene-LDO45_RS03625;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=LDO45_RS03625;old_locus_tag=BDI4_1140019 NZ_CAJZAS010000018.1 Protein Homology CDS 17455 18438 . - 0 ID=cds-WP_059523448.1;Parent=gene-LDO45_RS03625;Dbxref=GenBank:WP_059523448.1;Name=WP_059523448.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417346.1;locus_tag=LDO45_RS03625;product=phosphate ABC transporter permease PstC;protein_id=WP_059523448.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 18533 19567 . - . ID=gene-LDO45_RS03630;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=LDO45_RS03630;old_locus_tag=BDI4_1140020 NZ_CAJZAS010000018.1 Protein Homology CDS 18533 19567 . - 0 ID=cds-WP_223960089.1;Parent=gene-LDO45_RS03630;Dbxref=GenBank:WP_223960089.1;Name=WP_223960089.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363555.1;locus_tag=LDO45_RS03630;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_223960089.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 20023 21378 . - . ID=gene-LDO45_RS03635;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=LDO45_RS03635;old_locus_tag=BDI4_1140021 NZ_CAJZAS010000018.1 Protein Homology CDS 20023 21378 . - 0 ID=cds-WP_059523459.1;Parent=gene-LDO45_RS03635;Dbxref=GenBank:WP_059523459.1;Name=WP_059523459.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004542480.1;locus_tag=LDO45_RS03635;product=phosphoglucosamine mutase;protein_id=WP_059523459.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 21415 22356 . - . ID=gene-LDO45_RS03640;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=LDO45_RS03640;old_locus_tag=BDI4_1140022 NZ_CAJZAS010000018.1 Protein Homology CDS 21415 22356 . - 0 ID=cds-WP_223960091.1;Parent=gene-LDO45_RS03640;Dbxref=GenBank:WP_223960091.1;Name=WP_223960091.1;Ontology_term=GO:0009396,GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493125.1;locus_tag=LDO45_RS03640;product=dihydropteroate synthase;protein_id=WP_223960091.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 22385 24280 . - . ID=gene-LDO45_RS03645;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=LDO45_RS03645;old_locus_tag=BDI4_1140023 NZ_CAJZAS010000018.1 Protein Homology CDS 22385 24280 . - 0 ID=cds-WP_059465595.1;Parent=gene-LDO45_RS03645;Dbxref=GenBank:WP_059465595.1;Name=WP_059465595.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656500.1;locus_tag=LDO45_RS03645;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_059465595.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 24447 25109 . - . ID=gene-LDO45_RS03650;Name=LDO45_RS03650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03650;old_locus_tag=BDI4_1140025 NZ_CAJZAS010000018.1 Protein Homology CDS 24447 25109 . - 0 ID=cds-WP_059523464.1;Parent=gene-LDO45_RS03650;Dbxref=GenBank:WP_059523464.1;Name=WP_059523464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009911930.1;locus_tag=LDO45_RS03650;product=RlmE family RNA methyltransferase;protein_id=WP_059523464.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 25303 25830 . + . ID=gene-LDO45_RS03655;Name=LDO45_RS03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03655;old_locus_tag=BDI4_1140026 NZ_CAJZAS010000018.1 Protein Homology CDS 25303 25830 . + 0 ID=cds-WP_223960094.1;Parent=gene-LDO45_RS03655;Dbxref=GenBank:WP_223960094.1;Name=WP_223960094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363551.1;locus_tag=LDO45_RS03655;product=YhbY family RNA-binding protein;protein_id=WP_223960094.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 25889 26347 . - . ID=gene-LDO45_RS03660;Name=LDO45_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03660;old_locus_tag=BDI4_1140027 NZ_CAJZAS010000018.1 Protein Homology CDS 25889 26347 . - 0 ID=cds-WP_059523468.1;Parent=gene-LDO45_RS03660;Dbxref=GenBank:WP_059523468.1;Name=WP_059523468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213687.1;locus_tag=LDO45_RS03660;product=DUF4149 domain-containing protein;protein_id=WP_059523468.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 26362 26838 . - . ID=gene-LDO45_RS03665;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=LDO45_RS03665;old_locus_tag=BDI4_1140028 NZ_CAJZAS010000018.1 Protein Homology CDS 26362 26838 . - 0 ID=cds-WP_021163362.1;Parent=gene-LDO45_RS03665;Dbxref=GenBank:WP_021163362.1;Name=WP_021163362.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534614.1;locus_tag=LDO45_RS03665;product=transcription elongation factor GreA;protein_id=WP_021163362.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 26957 30211 . - . ID=gene-LDO45_RS03670;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=LDO45_RS03670;old_locus_tag=BDI4_1140029 NZ_CAJZAS010000018.1 Protein Homology CDS 26957 30211 . - 0 ID=cds-WP_059691169.1;Parent=gene-LDO45_RS03670;Dbxref=GenBank:WP_059691169.1;Name=WP_059691169.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193866.1;locus_tag=LDO45_RS03670;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_059691169.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 30271 30930 . - . ID=gene-LDO45_RS03675;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=LDO45_RS03675;old_locus_tag=BDI4_1140030 NZ_CAJZAS010000018.1 Protein Homology CDS 30271 30930 . - 0 ID=cds-WP_059523472.1;Parent=gene-LDO45_RS03675;Dbxref=GenBank:WP_059523472.1;Name=WP_059523472.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192135.1;locus_tag=LDO45_RS03675;product=leucine efflux protein LeuE;protein_id=WP_059523472.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 30968 32113 . - . ID=gene-LDO45_RS03680;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=LDO45_RS03680;old_locus_tag=BDI4_1140031 NZ_CAJZAS010000018.1 Protein Homology CDS 30968 32113 . - 0 ID=cds-WP_059523474.1;Parent=gene-LDO45_RS03680;Dbxref=GenBank:WP_059523474.1;Name=WP_059523474.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697358.1;locus_tag=LDO45_RS03680;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_059523474.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 32475 33707 . - . ID=gene-LDO45_RS03685;Name=LDO45_RS03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03685;old_locus_tag=BDI4_1140032 NZ_CAJZAS010000018.1 Protein Homology CDS 32475 33707 . - 0 ID=cds-WP_223960096.1;Parent=gene-LDO45_RS03685;Dbxref=GenBank:WP_223960096.1;Name=WP_223960096.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897435.1;locus_tag=LDO45_RS03685;product=nitrate/nitrite transporter;protein_id=WP_223960096.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 33871 35457 . - . ID=gene-LDO45_RS03690;Name=LDO45_RS03690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03690;old_locus_tag=BDI4_1140033 NZ_CAJZAS010000018.1 Protein Homology CDS 33871 35457 . - 0 ID=cds-WP_059523478.1;Parent=gene-LDO45_RS03690;Dbxref=GenBank:WP_059523478.1;Name=WP_059523478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694247.1;locus_tag=LDO45_RS03690;product=transglycosylase SLT domain-containing protein;protein_id=WP_059523478.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 35610 36416 . - . ID=gene-LDO45_RS03695;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=LDO45_RS03695;old_locus_tag=BDI4_1140034 NZ_CAJZAS010000018.1 Protein Homology CDS 35610 36416 . - 0 ID=cds-WP_223960098.1;Parent=gene-LDO45_RS03695;Dbxref=GenBank:WP_223960098.1;Name=WP_223960098.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600438.1;locus_tag=LDO45_RS03695;product=hydroxyacylglutathione hydrolase;protein_id=WP_223960098.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 36435 37247 . + . ID=gene-LDO45_RS03700;Name=LDO45_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03700;old_locus_tag=BDI4_1140036 NZ_CAJZAS010000018.1 Protein Homology CDS 36435 37247 . + 0 ID=cds-WP_059523482.1;Parent=gene-LDO45_RS03700;Dbxref=GenBank:WP_059523482.1;Name=WP_059523482.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004556858.1;locus_tag=LDO45_RS03700;product=class I SAM-dependent methyltransferase;protein_id=WP_059523482.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 37244 37687 . + . ID=gene-LDO45_RS03705;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=LDO45_RS03705;old_locus_tag=BDI4_1140035 NZ_CAJZAS010000018.1 Protein Homology CDS 37244 37687 . + 0 ID=cds-WP_059523484.1;Parent=gene-LDO45_RS03705;Dbxref=GenBank:WP_059523484.1;Name=WP_059523484.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764660.1;locus_tag=LDO45_RS03705;product=ribonuclease HI;protein_id=WP_059523484.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 37726 38460 . + . ID=gene-LDO45_RS03710;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=LDO45_RS03710;old_locus_tag=BDI4_1140037 NZ_CAJZAS010000018.1 Protein Homology CDS 37726 38460 . + 0 ID=cds-WP_059523485.1;Parent=gene-LDO45_RS03710;Dbxref=GenBank:WP_059523485.1;Name=WP_059523485.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656490.1;locus_tag=LDO45_RS03710;product=DNA polymerase III subunit epsilon;protein_id=WP_059523485.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 38495 38827 . - . ID=gene-LDO45_RS03715;Name=LDO45_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03715;old_locus_tag=BDI4_1140038 NZ_CAJZAS010000018.1 Protein Homology CDS 38495 38827 . - 0 ID=cds-WP_059523489.1;Parent=gene-LDO45_RS03715;Dbxref=GenBank:WP_059523489.1;Name=WP_059523489.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656489.1;locus_tag=LDO45_RS03715;product=YnfA family protein;protein_id=WP_059523489.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 39367 40854 . + . ID=gene-LDO45_RS03720;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=LDO45_RS03720;old_locus_tag=BDI4_1140040 NZ_CAJZAS010000018.1 Protein Homology CDS 39367 40854 . + 0 ID=cds-WP_059523491.1;Parent=gene-LDO45_RS03720;Dbxref=GenBank:WP_059523491.1;Name=WP_059523491.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332641.1;locus_tag=LDO45_RS03720;product=glycine betaine/L-proline transporter ProP;protein_id=WP_059523491.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 40963 41169 . - . ID=gene-LDO45_RS03725;Name=LDO45_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03725;old_locus_tag=BDI4_1140041 NZ_CAJZAS010000018.1 Protein Homology CDS 40963 41169 . - 0 ID=cds-WP_059702035.1;Parent=gene-LDO45_RS03725;Dbxref=GenBank:WP_059702035.1;Name=WP_059702035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722807.1;locus_tag=LDO45_RS03725;product=hypothetical protein;protein_id=WP_059702035.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 41502 42131 . - . ID=gene-LDO45_RS03730;Name=LDO45_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03730;old_locus_tag=BDI4_1140042 NZ_CAJZAS010000018.1 Protein Homology CDS 41502 42131 . - 0 ID=cds-WP_223960100.1;Parent=gene-LDO45_RS03730;Dbxref=GenBank:WP_223960100.1;Name=WP_223960100.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851393.1;locus_tag=LDO45_RS03730;product=glutathione S-transferase family protein;protein_id=WP_223960100.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 42279 43502 . + . ID=gene-LDO45_RS03735;Name=phaZ;gbkey=Gene;gene=phaZ;gene_biotype=protein_coding;locus_tag=LDO45_RS03735;old_locus_tag=BDI4_1140043 NZ_CAJZAS010000018.1 Protein Homology CDS 42279 43502 . + 0 ID=cds-WP_223960102.1;Parent=gene-LDO45_RS03735;Dbxref=GenBank:WP_223960102.1;Name=WP_223960102.1;gbkey=CDS;gene=phaZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405099.1;locus_tag=LDO45_RS03735;product=polyhydroxyalkanoate depolymerase;protein_id=WP_223960102.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 43489 44157 . - . ID=gene-LDO45_RS03740;Name=LDO45_RS03740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03740;old_locus_tag=BDI4_1140044 NZ_CAJZAS010000018.1 Protein Homology CDS 43489 44157 . - 0 ID=cds-WP_223960104.1;Parent=gene-LDO45_RS03740;Dbxref=GenBank:WP_223960104.1;Name=WP_223960104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401069.1;locus_tag=LDO45_RS03740;product=phosphoribosyltransferase;protein_id=WP_223960104.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq gene 44331 44852 . - . ID=gene-LDO45_RS03745;Name=LDO45_RS03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03745;old_locus_tag=BDI4_1140045 NZ_CAJZAS010000018.1 Protein Homology CDS 44331 44852 . - 0 ID=cds-WP_223960106.1;Parent=gene-LDO45_RS03745;Dbxref=GenBank:WP_223960106.1;Name=WP_223960106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363539.1;locus_tag=LDO45_RS03745;product=phospholipase D-like domain-containing protein;protein_id=WP_223960106.1;transl_table=11 NZ_CAJZAS010000018.1 RefSeq pseudogene 45003 45964 . - . ID=gene-LDO45_RS03750;Name=LDO45_RS03750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS03750;old_locus_tag=BDI4_1140046;pseudo=true NZ_CAJZAS010000018.1 Protein Homology CDS 45003 45964 . - 0 ID=cds-LDO45_RS03750;Parent=gene-LDO45_RS03750;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897449.1;locus_tag=LDO45_RS03750;product=acyltransferase domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000019.1 1 14946 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000019.1 RefSeq region 1 14946 . + . ID=NZ_CAJZAS010000019.1:1..14946;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_115 NZ_CAJZAS010000019.1 RefSeq gene 1 949 . + . ID=gene-LDO45_RS03755;Name=LDO45_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03755;old_locus_tag=BDI4_1150001;partial=true;start_range=.,1 NZ_CAJZAS010000019.1 Protein Homology CDS 1 949 . + 1 ID=cds-WP_223960110.1;Parent=gene-LDO45_RS03755;Dbxref=GenBank:WP_223960110.1;Name=WP_223960110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411378.1;locus_tag=LDO45_RS03755;partial=true;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_223960110.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000019.1 RefSeq gene 1114 2400 . + . ID=gene-LDO45_RS03760;Name=LDO45_RS03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03760;old_locus_tag=BDI4_1150002 NZ_CAJZAS010000019.1 Protein Homology CDS 1114 2400 . + 0 ID=cds-WP_223960112.1;Parent=gene-LDO45_RS03760;Dbxref=GenBank:WP_223960112.1;Name=WP_223960112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338513.1;locus_tag=LDO45_RS03760;product=DUF445 domain-containing protein;protein_id=WP_223960112.1;transl_table=11 NZ_CAJZAS010000019.1 RefSeq gene 2458 2757 . - . ID=gene-LDO45_RS03765;Name=LDO45_RS03765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03765;old_locus_tag=BDI4_1150003 NZ_CAJZAS010000019.1 Protein Homology CDS 2458 2757 . - 0 ID=cds-WP_006750245.1;Parent=gene-LDO45_RS03765;Dbxref=GenBank:WP_006750245.1;Name=WP_006750245.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089041.1;locus_tag=LDO45_RS03765;product=addiction module antidote protein;protein_id=WP_006750245.1;transl_table=11 NZ_CAJZAS010000019.1 RefSeq gene 2761 3078 . - . ID=gene-LDO45_RS03770;Name=LDO45_RS03770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03770;old_locus_tag=BDI4_1150004 NZ_CAJZAS010000019.1 Protein Homology CDS 2761 3078 . - 0 ID=cds-WP_223960114.1;Parent=gene-LDO45_RS03770;Dbxref=GenBank:WP_223960114.1;Name=WP_223960114.1;Ontology_term=GO:0008219,GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724585.1;locus_tag=LDO45_RS03770;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_223960114.1;transl_table=11 NZ_CAJZAS010000019.1 RefSeq gene 3456 5096 . + . ID=gene-LDO45_RS03775;Name=LDO45_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03775;old_locus_tag=BDI4_1150005 NZ_CAJZAS010000019.1 Protein Homology CDS 3456 5096 . + 0 ID=cds-WP_059531686.1;Parent=gene-LDO45_RS03775;Dbxref=GenBank:WP_059531686.1;Name=WP_059531686.1;Ontology_term=GO:0000287,GO:0003824,GO:0030976;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009978184.1;locus_tag=LDO45_RS03775;product=acetolactate synthase large subunit;protein_id=WP_059531686.1;transl_table=11 NZ_CAJZAS010000019.1 RefSeq gene 5125 6558 . + . ID=gene-LDO45_RS03780;Name=LDO45_RS03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03780;old_locus_tag=BDI4_1150006 NZ_CAJZAS010000019.1 Protein Homology CDS 5125 6558 . + 0 ID=cds-WP_059689501.1;Parent=gene-LDO45_RS03780;Dbxref=GenBank:WP_059689501.1;Name=WP_059689501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330254.1;locus_tag=LDO45_RS03780;product=aldehyde dehydrogenase family protein;protein_id=WP_059689501.1;transl_table=11 NZ_CAJZAS010000019.1 RefSeq gene 6810 8393 . + . ID=gene-LDO45_RS03785;Name=LDO45_RS03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03785;old_locus_tag=BDI4_1150007 NZ_CAJZAS010000019.1 Protein Homology CDS 6810 8393 . + 0 ID=cds-WP_059531680.1;Parent=gene-LDO45_RS03785;Dbxref=GenBank:WP_059531680.1;Name=WP_059531680.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365547.1;locus_tag=LDO45_RS03785;product=Na+/H+ antiporter;protein_id=WP_059531680.1;transl_table=11 NZ_CAJZAS010000019.1 RefSeq gene 8900 10033 . + . ID=gene-LDO45_RS03790;Name=LDO45_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03790;old_locus_tag=BDI4_1150008 NZ_CAJZAS010000019.1 Protein Homology CDS 8900 10033 . + 0 ID=cds-WP_059531677.1;Parent=gene-LDO45_RS03790;Dbxref=GenBank:WP_059531677.1;Name=WP_059531677.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900125.1;locus_tag=LDO45_RS03790;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_059531677.1;transl_table=11 NZ_CAJZAS010000019.1 RefSeq gene 10157 11833 . + . ID=gene-LDO45_RS03795;Name=LDO45_RS03795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03795;old_locus_tag=BDI4_1150009 NZ_CAJZAS010000019.1 Protein Homology CDS 10157 11833 . + 0 ID=cds-WP_059689503.1;Parent=gene-LDO45_RS03795;Dbxref=GenBank:WP_059689503.1;Name=WP_059689503.1;Ontology_term=GO:0098561;gbkey=CDS;go_component=methyl accepting chemotaxis protein complex|0098561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404210.1;locus_tag=LDO45_RS03795;product=methyl-accepting chemotaxis protein;protein_id=WP_059689503.1;transl_table=11 NZ_CAJZAS010000019.1 RefSeq gene 11830 12342 . + . ID=gene-LDO45_RS03800;Name=LDO45_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03800;old_locus_tag=BDI4_1150010 NZ_CAJZAS010000019.1 Protein Homology CDS 11830 12342 . + 0 ID=cds-WP_059531672.1;Parent=gene-LDO45_RS03800;Dbxref=GenBank:WP_059531672.1;Name=WP_059531672.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756582.1;locus_tag=LDO45_RS03800;product=chemotaxis protein CheW;protein_id=WP_059531672.1;transl_table=11 NZ_CAJZAS010000019.1 RefSeq gene 12339 13754 . + . ID=gene-LDO45_RS03805;Name=LDO45_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03805;old_locus_tag=BDI4_1150011 NZ_CAJZAS010000019.1 Protein Homology CDS 12339 13754 . + 0 ID=cds-WP_223960118.1;Parent=gene-LDO45_RS03805;Dbxref=GenBank:WP_223960118.1;Name=WP_223960118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404208.1;locus_tag=LDO45_RS03805;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_223960118.1;transl_table=11 NZ_CAJZAS010000019.1 RefSeq gene 13800 14504 . + . ID=gene-LDO45_RS03810;Name=LDO45_RS03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03810;old_locus_tag=BDI4_1150012 NZ_CAJZAS010000019.1 Protein Homology CDS 13800 14504 . + 0 ID=cds-WP_223960120.1;Parent=gene-LDO45_RS03810;Dbxref=GenBank:WP_223960120.1;Name=WP_223960120.1;Ontology_term=GO:0006935,GO:0007165;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398022.1;locus_tag=LDO45_RS03810;product=chemotaxis protein CheW;protein_id=WP_223960120.1;transl_table=11 NZ_CAJZAS010000019.1 RefSeq gene 14501 14946 . + . ID=gene-LDO45_RS03815;Name=LDO45_RS03815;end_range=14946,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03815;partial=true NZ_CAJZAS010000019.1 Protein Homology CDS 14501 14946 . + 0 ID=cds-WP_223960122.1;Parent=gene-LDO45_RS03815;Dbxref=GenBank:WP_223960122.1;Name=WP_223960122.1;Ontology_term=GO:0000160;end_range=14946,.;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355897.1;locus_tag=LDO45_RS03815;partial=true;product=Hpt domain-containing protein;protein_id=WP_223960122.1;transl_table=11 ##sequence-region NZ_CAJZAS010000020.1 1 21905 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000020.1 RefSeq region 1 21905 . + . ID=NZ_CAJZAS010000020.1:1..21905;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_116 NZ_CAJZAS010000020.1 RefSeq gene 1 1006 . + . ID=gene-LDO45_RS03820;Name=LDO45_RS03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03820;old_locus_tag=BDI4_1160001;partial=true;start_range=.,1 NZ_CAJZAS010000020.1 Protein Homology CDS 1 1006 . + 1 ID=cds-WP_223960124.1;Parent=gene-LDO45_RS03820;Dbxref=GenBank:WP_223960124.1;Name=WP_223960124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328826.1;locus_tag=LDO45_RS03820;partial=true;product=dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_223960124.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000020.1 RefSeq gene 1279 3048 . + . ID=gene-LDO45_RS03825;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=LDO45_RS03825;old_locus_tag=BDI4_1160002 NZ_CAJZAS010000020.1 Protein Homology CDS 1279 3048 . + 0 ID=cds-WP_059535870.1;Parent=gene-LDO45_RS03825;Dbxref=GenBank:WP_059535870.1;Name=WP_059535870.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213072.1;locus_tag=LDO45_RS03825;product=dihydrolipoyl dehydrogenase;protein_id=WP_059535870.1;transl_table=11 NZ_CAJZAS010000020.1 RefSeq gene 3246 3812 . - . ID=gene-LDO45_RS03830;Name=LDO45_RS03830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03830;old_locus_tag=BDI4_1160003 NZ_CAJZAS010000020.1 Protein Homology CDS 3246 3812 . - 0 ID=cds-WP_059450463.1;Parent=gene-LDO45_RS03830;Dbxref=GenBank:WP_059450463.1;Name=WP_059450463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331817.1;locus_tag=LDO45_RS03830;product=phasin family protein;protein_id=WP_059450463.1;transl_table=11 NZ_CAJZAS010000020.1 RefSeq gene 4466 5617 . + . ID=gene-LDO45_RS03835;Name=pbpG;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=LDO45_RS03835;old_locus_tag=BDI4_1160005 NZ_CAJZAS010000020.1 Protein Homology CDS 4466 5617 . + 0 ID=cds-WP_059535869.1;Parent=gene-LDO45_RS03835;Dbxref=GenBank:WP_059535869.1;Name=WP_059535869.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=pbpG;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401961.1;locus_tag=LDO45_RS03835;product=D-alanyl-D-alanine endopeptidase;protein_id=WP_059535869.1;transl_table=11 NZ_CAJZAS010000020.1 RefSeq gene 5719 6528 . - . ID=gene-LDO45_RS03840;Name=LDO45_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03840;old_locus_tag=BDI4_1160007 NZ_CAJZAS010000020.1 Protein Homology CDS 5719 6528 . - 0 ID=cds-WP_059535866.1;Parent=gene-LDO45_RS03840;Dbxref=GenBank:WP_059535866.1;Name=WP_059535866.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478384.1;locus_tag=LDO45_RS03840;product=IclR family transcriptional regulator;protein_id=WP_059535866.1;transl_table=11 NZ_CAJZAS010000020.1 RefSeq gene 6712 7434 . + . ID=gene-LDO45_RS03845;Name=LDO45_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03845;old_locus_tag=BDI4_1160006 NZ_CAJZAS010000020.1 Protein Homology CDS 6712 7434 . + 0 ID=cds-WP_059535864.1;Parent=gene-LDO45_RS03845;Dbxref=GenBank:WP_059535864.1;Name=WP_059535864.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549455.1;locus_tag=LDO45_RS03845;product=(Fe-S)-binding protein;protein_id=WP_059535864.1;transl_table=11 NZ_CAJZAS010000020.1 RefSeq gene 7469 8881 . + . ID=gene-LDO45_RS03850;Name=LDO45_RS03850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03850;old_locus_tag=BDI4_1160008 NZ_CAJZAS010000020.1 Protein Homology CDS 7469 8881 . + 0 ID=cds-WP_059535861.1;Parent=gene-LDO45_RS03850;Dbxref=GenBank:WP_059535861.1;Name=WP_059535861.1;Ontology_term=GO:0019516,GO:0009055,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=lactate oxidation|0019516||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408173.1;locus_tag=LDO45_RS03850;product=lactate utilization protein B;protein_id=WP_059535861.1;transl_table=11 NZ_CAJZAS010000020.1 RefSeq gene 9009 9236 . + . ID=gene-LDO45_RS03855;Name=LDO45_RS03855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03855;old_locus_tag=BDI4_1160009 NZ_CAJZAS010000020.1 Protein Homology CDS 9009 9236 . + 0 ID=cds-WP_059535859.1;Parent=gene-LDO45_RS03855;Dbxref=GenBank:WP_059535859.1;Name=WP_059535859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478387.1;locus_tag=LDO45_RS03855;product=hypothetical protein;protein_id=WP_059535859.1;transl_table=11 NZ_CAJZAS010000020.1 RefSeq gene 9338 9820 . + . ID=gene-LDO45_RS03860;Name=LDO45_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03860;old_locus_tag=BDI4_1160010 NZ_CAJZAS010000020.1 Protein Homology CDS 9338 9820 . + 0 ID=cds-WP_223960126.1;Parent=gene-LDO45_RS03860;Dbxref=GenBank:WP_223960126.1;Name=WP_223960126.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478388.1;locus_tag=LDO45_RS03860;product=low molecular weight protein-tyrosine-phosphatase;protein_id=WP_223960126.1;transl_table=11 NZ_CAJZAS010000020.1 RefSeq gene 9940 10479 . + . ID=gene-LDO45_RS03865;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=LDO45_RS03865;old_locus_tag=BDI4_1160011 NZ_CAJZAS010000020.1 Protein Homology CDS 9940 10479 . + 0 ID=cds-WP_009691731.1;Parent=gene-LDO45_RS03865;Dbxref=GenBank:WP_009691731.1;Name=WP_009691731.1;Ontology_term=GO:0006355,GO:0003690,GO:0003700;gbkey=CDS;gene=iscR;go_function=double-stranded DNA binding|0003690||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195928.1;locus_tag=LDO45_RS03865;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_009691731.1;transl_table=11 NZ_CAJZAS010000020.1 RefSeq gene 10543 11766 . + . ID=gene-LDO45_RS03870;Name=LDO45_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03870;old_locus_tag=BDI4_1160012 NZ_CAJZAS010000020.1 Protein Homology CDS 10543 11766 . + 0 ID=cds-WP_059535854.1;Parent=gene-LDO45_RS03870;Dbxref=GenBank:WP_059535854.1;Name=WP_059535854.1;Ontology_term=GO:0044571,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=[2Fe-2S] cluster assembly|0044571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698736.1;locus_tag=LDO45_RS03870;product=IscS subfamily cysteine desulfurase;protein_id=WP_059535854.1;transl_table=11 NZ_CAJZAS010000020.1 RefSeq gene 11835 12242 . + . ID=gene-LDO45_RS03875;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=LDO45_RS03875;old_locus_tag=BDI4_1160014 NZ_CAJZAS010000020.1 Protein Homology CDS 11835 12242 . + 0 ID=cds-WP_009691729.1;Parent=gene-LDO45_RS03875;Dbxref=GenBank:WP_009691729.1;Name=WP_009691729.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533937.1;locus_tag=LDO45_RS03875;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_009691729.1;transl_table=11 NZ_CAJZAS010000020.1 RefSeq gene 12307 12630 . + . ID=gene-LDO45_RS03880;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=LDO45_RS03880;old_locus_tag=BDI4_1160015 NZ_CAJZAS010000020.1 Protein Homology CDS 12307 12630 . + 0 ID=cds-WP_011885413.1;Parent=gene-LDO45_RS03880;Dbxref=GenBank:WP_011885413.1;Name=WP_011885413.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=iscA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018417526.1;locus_tag=LDO45_RS03880;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_011885413.1;transl_table=11 NZ_CAJZAS010000020.1 RefSeq gene 12725 13252 . + . ID=gene-LDO45_RS03885;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=LDO45_RS03885;old_locus_tag=BDI4_1160016 NZ_CAJZAS010000020.1 Protein Homology CDS 12725 13252 . + 0 ID=cds-WP_034176899.1;Parent=gene-LDO45_RS03885;Dbxref=GenBank:WP_034176899.1;Name=WP_034176899.1;Ontology_term=GO:0051259,GO:0097428,GO:0051087;gbkey=CDS;gene=hscB;go_function=protein-folding chaperone binding|0051087||IEA;go_process=protein complex oligomerization|0051259||IEA,protein maturation by iron-sulfur cluster transfer|0097428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091954.1;locus_tag=LDO45_RS03885;product=Fe-S protein assembly co-chaperone HscB;protein_id=WP_034176899.1;transl_table=11 NZ_CAJZAS010000020.1 RefSeq gene 13307 15175 . + . ID=gene-LDO45_RS03890;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=LDO45_RS03890;old_locus_tag=BDI4_1160017 NZ_CAJZAS010000020.1 Protein Homology CDS 13307 15175 . + 0 ID=cds-WP_223960128.1;Parent=gene-LDO45_RS03890;Dbxref=GenBank:WP_223960128.1;Name=WP_223960128.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876413.1;locus_tag=LDO45_RS03890;product=Fe-S protein assembly chaperone HscA;protein_id=WP_223960128.1;transl_table=11 NZ_CAJZAS010000020.1 RefSeq gene 15260 15601 . + . ID=gene-LDO45_RS03895;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=LDO45_RS03895;old_locus_tag=BDI4_1160018 NZ_CAJZAS010000020.1 Protein Homology CDS 15260 15601 . + 0 ID=cds-WP_059464189.1;Parent=gene-LDO45_RS03895;Dbxref=GenBank:WP_059464189.1;Name=WP_059464189.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193872.1;locus_tag=LDO45_RS03895;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_059464189.1;transl_table=11 NZ_CAJZAS010000020.1 RefSeq gene 15646 15855 . + . ID=gene-LDO45_RS03900;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=LDO45_RS03900;old_locus_tag=BDI4_1160019 NZ_CAJZAS010000020.1 Protein Homology CDS 15646 15855 . + 0 ID=cds-WP_040144569.1;Parent=gene-LDO45_RS03900;Dbxref=GenBank:WP_040144569.1;Name=WP_040144569.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601144.1;locus_tag=LDO45_RS03900;product=Fe-S cluster assembly protein IscX;protein_id=WP_040144569.1;transl_table=11 NZ_CAJZAS010000020.1 RefSeq gene 15984 16727 . - . ID=gene-LDO45_RS03905;Name=LDO45_RS03905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03905;old_locus_tag=BDI4_1160020 NZ_CAJZAS010000020.1 Protein Homology CDS 15984 16727 . - 0 ID=cds-WP_223960130.1;Parent=gene-LDO45_RS03905;Dbxref=GenBank:WP_223960130.1;Name=WP_223960130.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409697.1;locus_tag=LDO45_RS03905;product=glycine zipper 2TM domain-containing protein;protein_id=WP_223960130.1;transl_table=11 NZ_CAJZAS010000020.1 RefSeq gene 17076 18602 . - . ID=gene-LDO45_RS03910;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=LDO45_RS03910;old_locus_tag=BDI4_1160021 NZ_CAJZAS010000020.1 Protein Homology CDS 17076 18602 . - 0 ID=cds-WP_059535844.1;Parent=gene-LDO45_RS03910;Dbxref=GenBank:WP_059535844.1;Name=WP_059535844.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091959.1;locus_tag=LDO45_RS03910;product=lysine--tRNA ligase;protein_id=WP_059535844.1;transl_table=11 NZ_CAJZAS010000020.1 RefSeq gene 18678 19782 . - . ID=gene-LDO45_RS03915;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=LDO45_RS03915;old_locus_tag=BDI4_1160022 NZ_CAJZAS010000020.1 Protein Homology CDS 19702 19782 . - 0 ID=cds-WP_107938119.1;Parent=gene-LDO45_RS03915;Dbxref=GenBank:WP_107938119.1;Name=WP_107938119.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006998981.1;locus_tag=LDO45_RS03915;product=peptide chain release factor 2;protein_id=WP_107938119.1;transl_table=11 NZ_CAJZAS010000020.1 Protein Homology CDS 18678 19700 . - 0 ID=cds-WP_107938119.1;Parent=gene-LDO45_RS03915;Dbxref=GenBank:WP_107938119.1;Name=WP_107938119.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006998981.1;locus_tag=LDO45_RS03915;product=peptide chain release factor 2;protein_id=WP_107938119.1;transl_table=11 NZ_CAJZAS010000020.1 RefSeq gene 19947 21644 . - . ID=gene-LDO45_RS03920;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=LDO45_RS03920;old_locus_tag=BDI4_1160024 NZ_CAJZAS010000020.1 Protein Homology CDS 19947 21644 . - 0 ID=cds-WP_223960132.1;Parent=gene-LDO45_RS03920;Dbxref=GenBank:WP_223960132.1;Name=WP_223960132.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352553.1;locus_tag=LDO45_RS03920;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_223960132.1;transl_table=11 NZ_CAJZAS010000020.1 RefSeq pseudogene 21655 21905 . - . ID=gene-LDO45_RS03925;Name=LDO45_RS03925;end_range=21905,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS03925;partial=true;pseudo=true NZ_CAJZAS010000020.1 Protein Homology CDS 21655 21905 . - 2 ID=cds-LDO45_RS03925;Parent=gene-LDO45_RS03925;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=21905,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025965.1;locus_tag=LDO45_RS03925;partial=true;product=regulator;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000021.1 1 10239 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000021.1 RefSeq region 1 10239 . + . ID=NZ_CAJZAS010000021.1:1..10239;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_117 NZ_CAJZAS010000021.1 RefSeq gene 1 290 . - . ID=gene-LDO45_RS34480;Name=LDO45_RS34480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34480;partial=true;start_range=.,1 NZ_CAJZAS010000021.1 GeneMarkS-2+ CDS 1 290 . - 0 ID=cds-WP_374109509.1;Parent=gene-LDO45_RS34480;Dbxref=GenBank:WP_374109509.1;Name=WP_374109509.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34480;partial=true;product=hypothetical protein;protein_id=WP_374109509.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000021.1 RefSeq gene 495 3689 . + . ID=gene-LDO45_RS03930;Name=LDO45_RS03930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03930 NZ_CAJZAS010000021.1 Protein Homology CDS 495 3689 . + 0 ID=cds-WP_374109508.1;Parent=gene-LDO45_RS03930;Dbxref=GenBank:WP_374109508.1;Name=WP_374109508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352783.1;locus_tag=LDO45_RS03930;product=DNA translocase FtsK;protein_id=WP_374109508.1;transl_table=11 NZ_CAJZAS010000021.1 RefSeq gene 3791 5038 . - . ID=gene-LDO45_RS03935;Name=LDO45_RS03935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03935;old_locus_tag=BDI4_1170004 NZ_CAJZAS010000021.1 Protein Homology CDS 3791 5038 . - 0 ID=cds-WP_223960137.1;Parent=gene-LDO45_RS03935;Dbxref=GenBank:WP_223960137.1;Name=WP_223960137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896430.1;locus_tag=LDO45_RS03935;product=lactonase family protein;protein_id=WP_223960137.1;transl_table=11 NZ_CAJZAS010000021.1 RefSeq gene 5204 7033 . + . ID=gene-LDO45_RS03940;Name=LDO45_RS03940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03940;old_locus_tag=BDI4_1170005 NZ_CAJZAS010000021.1 Protein Homology CDS 5204 7033 . + 0 ID=cds-WP_059527320.1;Parent=gene-LDO45_RS03940;Dbxref=GenBank:WP_059527320.1;Name=WP_059527320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331492.1;locus_tag=LDO45_RS03940;product=glycoside hydrolase family 15 protein;protein_id=WP_059527320.1;transl_table=11 NZ_CAJZAS010000021.1 RefSeq gene 7245 8732 . + . ID=gene-LDO45_RS03945;Name=LDO45_RS03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03945;old_locus_tag=BDI4_1170006 NZ_CAJZAS010000021.1 Protein Homology CDS 7245 8732 . + 0 ID=cds-WP_223960139.1;Parent=gene-LDO45_RS03945;Dbxref=GenBank:WP_223960139.1;Name=WP_223960139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545868.1;locus_tag=LDO45_RS03945;product=polyhydroxyalkanoate depolymerase;protein_id=WP_223960139.1;transl_table=11 NZ_CAJZAS010000021.1 RefSeq gene 8814 9446 . - . ID=gene-LDO45_RS03950;Name=LDO45_RS03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03950;old_locus_tag=BDI4_1170007 NZ_CAJZAS010000021.1 Protein Homology CDS 8814 9446 . - 0 ID=cds-WP_059527327.1;Parent=gene-LDO45_RS03950;Dbxref=GenBank:WP_059527327.1;Name=WP_059527327.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352787.1;locus_tag=LDO45_RS03950;product=TetR family transcriptional regulator;protein_id=WP_059527327.1;transl_table=11 NZ_CAJZAS010000021.1 RefSeq gene 9603 10239 . + . ID=gene-LDO45_RS03955;Name=rsxB;end_range=10239,.;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=LDO45_RS03955;partial=true NZ_CAJZAS010000021.1 Protein Homology CDS 9603 10239 . + 0 ID=cds-WP_223960141.1;Parent=gene-LDO45_RS03955;Dbxref=GenBank:WP_223960141.1;Name=WP_223960141.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;end_range=10239,.;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478197.1;locus_tag=LDO45_RS03955;partial=true;product=electron transport complex subunit RsxB;protein_id=WP_223960141.1;transl_table=11 ##sequence-region NZ_CAJZAS010000022.1 1 2299 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000022.1 RefSeq region 1 2299 . + . ID=NZ_CAJZAS010000022.1:1..2299;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_118 NZ_CAJZAS010000022.1 RefSeq gene 1 251 . - . ID=gene-LDO45_RS03960;Name=LDO45_RS03960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03960;partial=true;start_range=.,1 NZ_CAJZAS010000022.1 GeneMarkS-2+ CDS 1 251 . - 0 ID=cds-WP_223960143.1;Parent=gene-LDO45_RS03960;Dbxref=GenBank:WP_223960143.1;Name=WP_223960143.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS03960;partial=true;product=hypothetical protein;protein_id=WP_223960143.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000022.1 RefSeq gene 329 769 . + . ID=gene-LDO45_RS03965;Name=LDO45_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03965 NZ_CAJZAS010000022.1 GeneMarkS-2+ CDS 329 769 . + 0 ID=cds-WP_223960145.1;Parent=gene-LDO45_RS03965;Dbxref=GenBank:WP_223960145.1;Name=WP_223960145.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS03965;product=hypothetical protein;protein_id=WP_223960145.1;transl_table=11 NZ_CAJZAS010000022.1 RefSeq gene 1369 1611 . - . ID=gene-LDO45_RS03970;Name=LDO45_RS03970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03970;old_locus_tag=BDI4_1180006 NZ_CAJZAS010000022.1 GeneMarkS-2+ CDS 1369 1611 . - 0 ID=cds-WP_223960147.1;Parent=gene-LDO45_RS03970;Dbxref=GenBank:WP_223960147.1;Name=WP_223960147.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS03970;product=hypothetical protein;protein_id=WP_223960147.1;transl_table=11 NZ_CAJZAS010000022.1 RefSeq gene 1904 2233 . - . ID=gene-LDO45_RS03975;Name=LDO45_RS03975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03975;old_locus_tag=BDI4_1180007 NZ_CAJZAS010000022.1 GeneMarkS-2+ CDS 1904 2233 . - 0 ID=cds-WP_196493306.1;Parent=gene-LDO45_RS03975;Dbxref=GenBank:WP_196493306.1;Name=WP_196493306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS03975;product=hypothetical protein;protein_id=WP_196493306.1;transl_table=11 ##sequence-region NZ_CAJZAS010000023.1 1 18273 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000023.1 RefSeq region 1 18273 . + . ID=NZ_CAJZAS010000023.1:1..18273;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_119 NZ_CAJZAS010000023.1 RefSeq gene 1 259 . - . ID=gene-LDO45_RS03980;Name=LDO45_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03980;partial=true;start_range=.,1 NZ_CAJZAS010000023.1 Protein Homology CDS 1 259 . - 0 ID=cds-WP_223960148.1;Parent=gene-LDO45_RS03980;Dbxref=GenBank:WP_223960148.1;Name=WP_223960148.1;Ontology_term=GO:0009236,GO:0016994;gbkey=CDS;go_function=precorrin-6A reductase activity|0016994||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400061.1;locus_tag=LDO45_RS03980;partial=true;product=precorrin-6A/cobalt-precorrin-6A reductase;protein_id=WP_223960148.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000023.1 RefSeq gene 256 1344 . - . ID=gene-LDO45_RS03985;Name=LDO45_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS03985;old_locus_tag=BDI4_1190002 NZ_CAJZAS010000023.1 Protein Homology CDS 256 1344 . - 0 ID=cds-WP_223960151.1;Parent=gene-LDO45_RS03985;Dbxref=GenBank:WP_223960151.1;Name=WP_223960151.1;Ontology_term=GO:0009236,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496429.1;locus_tag=LDO45_RS03985;product=cobalt-precorrin-5B (C(1))-methyltransferase;protein_id=WP_223960151.1;transl_table=11 NZ_CAJZAS010000023.1 RefSeq gene 1344 2579 . - . ID=gene-LDO45_RS03990;Name=cbiE;gbkey=Gene;gene=cbiE;gene_biotype=protein_coding;locus_tag=LDO45_RS03990;old_locus_tag=BDI4_1190003 NZ_CAJZAS010000023.1 Protein Homology CDS 1344 2579 . - 0 ID=cds-WP_223960153.1;Parent=gene-LDO45_RS03990;Dbxref=GenBank:WP_223960153.1;Name=WP_223960153.1;Ontology_term=GO:0009236,GO:0046140,GO:0046025;gbkey=CDS;gene=cbiE;go_function=precorrin-6Y C5%2C15-methyltransferase (decarboxylating) activity|0046025||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,corrin biosynthetic process|0046140||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363888.1;locus_tag=LDO45_RS03990;product=precorrin-6y C5%2C15-methyltransferase (decarboxylating) subunit CbiE;protein_id=WP_223960153.1;transl_table=11 NZ_CAJZAS010000023.1 cmsearch riboswitch 2783 2974 . + . ID=id-NZ_CAJZAS010000023.1:2783..2974;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAS010000023.1 RefSeq gene 3081 4436 . + . ID=gene-LDO45_RS03995;Name=cobG;gbkey=Gene;gene=cobG;gene_biotype=protein_coding;locus_tag=LDO45_RS03995;old_locus_tag=BDI4_1190004 NZ_CAJZAS010000023.1 Protein Homology CDS 3081 4436 . + 0 ID=cds-WP_290370993.1;Parent=gene-LDO45_RS03995;Dbxref=GenBank:WP_290370993.1;Name=WP_290370993.1;Ontology_term=GO:0019250,GO:0016709;gbkey=CDS;gene=cobG;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=aerobic cobalamin biosynthetic process|0019250||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884845.1;locus_tag=LDO45_RS03995;product=precorrin-3B synthase;protein_id=WP_290370993.1;transl_table=11 NZ_CAJZAS010000023.1 RefSeq pseudogene 4429 5091 . + . ID=gene-LDO45_RS04000;Name=LDO45_RS04000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS04000;pseudo=true NZ_CAJZAS010000023.1 Protein Homology CDS 4429 5091 . + 0 ID=cds-LDO45_RS04000;Parent=gene-LDO45_RS04000;Note=too many ambiguous residues;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017778279.1;locus_tag=LDO45_RS04000;product=precorrin-8X methylmutase;pseudo=true;transl_table=11 NZ_CAJZAS010000023.1 RefSeq gene 5088 5822 . + . ID=gene-LDO45_RS04005;Name=LDO45_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04005;old_locus_tag=BDI4_1190007 NZ_CAJZAS010000023.1 Protein Homology CDS 5088 5822 . + 0 ID=cds-WP_059502040.1;Parent=gene-LDO45_RS04005;Dbxref=GenBank:WP_059502040.1;Name=WP_059502040.1;Ontology_term=GO:0009236,GO:0030788;gbkey=CDS;go_function=precorrin-2 C20-methyltransferase activity|0030788||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601722.1;locus_tag=LDO45_RS04005;product=precorrin-2 C(20)-methyltransferase;protein_id=WP_059502040.1;transl_table=11 NZ_CAJZAS010000023.1 RefSeq gene 5819 7534 . + . ID=gene-LDO45_RS04010;Name=cobJ;gbkey=Gene;gene=cobJ;gene_biotype=protein_coding;locus_tag=LDO45_RS04010;old_locus_tag=BDI4_1190008 NZ_CAJZAS010000023.1 Protein Homology CDS 5819 7534 . + 0 ID=cds-WP_223960157.1;Parent=gene-LDO45_RS04010;Dbxref=GenBank:WP_223960157.1;Name=WP_223960157.1;Ontology_term=GO:0009236,GO:0030789;gbkey=CDS;gene=cobJ;go_function=precorrin-3B C17-methyltransferase activity|0030789||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884840.1;locus_tag=LDO45_RS04010;product=precorrin-3B C(17)-methyltransferase;protein_id=WP_223960157.1;transl_table=11 NZ_CAJZAS010000023.1 RefSeq gene 7787 9142 . + . ID=gene-LDO45_RS04015;Name=LDO45_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04015;old_locus_tag=BDI4_1190010 NZ_CAJZAS010000023.1 Protein Homology CDS 7787 9142 . + 0 ID=cds-WP_223960159.1;Parent=gene-LDO45_RS04015;Dbxref=GenBank:WP_223960159.1;Name=WP_223960159.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496435.1;locus_tag=LDO45_RS04015;product=chitinase;protein_id=WP_223960159.1;transl_table=11 NZ_CAJZAS010000023.1 RefSeq gene 9250 9993 . - . ID=gene-LDO45_RS04020;Name=LDO45_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04020;old_locus_tag=BDI4_1190011 NZ_CAJZAS010000023.1 Protein Homology CDS 9250 9993 . - 0 ID=cds-WP_223960160.1;Parent=gene-LDO45_RS04020;Dbxref=GenBank:WP_223960160.1;Name=WP_223960160.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328481.1;locus_tag=LDO45_RS04020;product=IclR family transcriptional regulator;protein_id=WP_223960160.1;transl_table=11 NZ_CAJZAS010000023.1 RefSeq gene 10047 11213 . - . ID=gene-LDO45_RS04025;Name=LDO45_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04025;old_locus_tag=BDI4_1190012 NZ_CAJZAS010000023.1 Protein Homology CDS 10047 11213 . - 0 ID=cds-WP_059524367.1;Parent=gene-LDO45_RS04025;Dbxref=GenBank:WP_059524367.1;Name=WP_059524367.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363881.1;locus_tag=LDO45_RS04025;product=acyl-CoA dehydrogenase family protein;protein_id=WP_059524367.1;transl_table=11 NZ_CAJZAS010000023.1 RefSeq gene 11356 12522 . - . ID=gene-LDO45_RS04030;Name=LDO45_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04030;old_locus_tag=BDI4_1190013 NZ_CAJZAS010000023.1 Protein Homology CDS 11356 12522 . - 0 ID=cds-WP_223960162.1;Parent=gene-LDO45_RS04030;Dbxref=GenBank:WP_223960162.1;Name=WP_223960162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656852.1;locus_tag=LDO45_RS04030;product=CaiB/BaiF CoA-transferase family protein;protein_id=WP_223960162.1;transl_table=11 NZ_CAJZAS010000023.1 RefSeq gene 12796 13041 . + . ID=gene-LDO45_RS04035;Name=LDO45_RS04035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04035;old_locus_tag=BDI4_1190015 NZ_CAJZAS010000023.1 Protein Homology CDS 12796 13041 . + 0 ID=cds-WP_059524371.1;Parent=gene-LDO45_RS04035;Dbxref=GenBank:WP_059524371.1;Name=WP_059524371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404816.1;locus_tag=LDO45_RS04035;product=hypothetical protein;protein_id=WP_059524371.1;transl_table=11 NZ_CAJZAS010000023.1 RefSeq gene 13203 13637 . + . ID=gene-LDO45_RS04040;Name=LDO45_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04040;old_locus_tag=BDI4_1190014 NZ_CAJZAS010000023.1 Protein Homology CDS 13203 13637 . + 0 ID=cds-WP_223960164.1;Parent=gene-LDO45_RS04040;Dbxref=GenBank:WP_223960164.1;Name=WP_223960164.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755936.1;locus_tag=LDO45_RS04040;product=NUDIX hydrolase;protein_id=WP_223960164.1;transl_table=11 NZ_CAJZAS010000023.1 RefSeq gene 13653 13979 . - . ID=gene-LDO45_RS04045;Name=LDO45_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04045;old_locus_tag=BDI4_1190016 NZ_CAJZAS010000023.1 Protein Homology CDS 13653 13979 . - 0 ID=cds-WP_059524375.1;Parent=gene-LDO45_RS04045;Dbxref=GenBank:WP_059524375.1;Name=WP_059524375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897044.1;locus_tag=LDO45_RS04045;product=low molecular weight protein tyrosine phosphatase family protein;protein_id=WP_059524375.1;transl_table=11 NZ_CAJZAS010000023.1 RefSeq gene 14016 14588 . - . ID=gene-LDO45_RS04050;Name=LDO45_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04050;old_locus_tag=BDI4_1190017 NZ_CAJZAS010000023.1 Protein Homology CDS 14016 14588 . - 0 ID=cds-WP_223960166.1;Parent=gene-LDO45_RS04050;Dbxref=GenBank:WP_223960166.1;Name=WP_223960166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756007.1;locus_tag=LDO45_RS04050;product=DUF1993 family protein;protein_id=WP_223960166.1;transl_table=11 NZ_CAJZAS010000023.1 RefSeq gene 14709 15161 . - . ID=gene-LDO45_RS04055;Name=LDO45_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04055;old_locus_tag=BDI4_1190018 NZ_CAJZAS010000023.1 Protein Homology CDS 14709 15161 . - 0 ID=cds-WP_059524379.1;Parent=gene-LDO45_RS04055;Dbxref=GenBank:WP_059524379.1;Name=WP_059524379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897046.1;locus_tag=LDO45_RS04055;product=YaiI/YqxD family protein;protein_id=WP_059524379.1;transl_table=11 NZ_CAJZAS010000023.1 RefSeq gene 15238 15846 . - . ID=gene-LDO45_RS04060;Name=LDO45_RS04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04060;old_locus_tag=BDI4_1190020 NZ_CAJZAS010000023.1 Protein Homology CDS 15238 15846 . - 0 ID=cds-WP_223960168.1;Parent=gene-LDO45_RS04060;Dbxref=GenBank:WP_223960168.1;Name=WP_223960168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496442.1;locus_tag=LDO45_RS04060;product=VWA domain-containing protein;protein_id=WP_223960168.1;transl_table=11 NZ_CAJZAS010000023.1 RefSeq gene 15915 17003 . - . ID=gene-LDO45_RS04065;Name=LDO45_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04065;old_locus_tag=BDI4_1190021 NZ_CAJZAS010000023.1 Protein Homology CDS 15915 17003 . - 0 ID=cds-WP_223960170.1;Parent=gene-LDO45_RS04065;Dbxref=GenBank:WP_223960170.1;Name=WP_223960170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404820.1;locus_tag=LDO45_RS04065;product=ATP-binding protein;protein_id=WP_223960170.1;transl_table=11 NZ_CAJZAS010000023.1 RefSeq pseudogene 17000 18273 . - . ID=gene-LDO45_RS04070;Name=LDO45_RS04070;end_range=18273,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS04070;old_locus_tag=BDI4_1190022;partial=true;pseudo=true NZ_CAJZAS010000023.1 Protein Homology CDS 17000 18273 . - 0 ID=cds-LDO45_RS04070;Parent=gene-LDO45_RS04070;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing N-terminus;Ontology_term=GO:0009058;end_range=18273,.;gbkey=CDS;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213350.1;locus_tag=LDO45_RS04070;partial=true;product=cobaltochelatase subunit CobN;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000024.1 1 223782 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000024.1 RefSeq region 1 223782 . + . ID=NZ_CAJZAS010000024.1:1..223782;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_12 NZ_CAJZAS010000024.1 RefSeq pseudogene 6 170 . - . ID=gene-LDO45_RS04075;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=pseudogene;locus_tag=LDO45_RS04075;old_locus_tag=BDI4_120001;partial=true;pseudo=true;start_range=.,6 NZ_CAJZAS010000024.1 Protein Homology CDS 6 170 . - 0 ID=cds-LDO45_RS04075;Parent=gene-LDO45_RS04075;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;gene=glyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018442488.1;locus_tag=LDO45_RS04075;partial=true;product=serine hydroxymethyltransferase;pseudo=true;start_range=.,6;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 491 1270 . - . ID=gene-LDO45_RS04080;Name=LDO45_RS04080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04080;old_locus_tag=BDI4_120002 NZ_CAJZAS010000024.1 Protein Homology CDS 491 1270 . - 0 ID=cds-WP_223960172.1;Parent=gene-LDO45_RS04080;Dbxref=GenBank:WP_223960172.1;Name=WP_223960172.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660128.1;locus_tag=LDO45_RS04080;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_223960172.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 1304 2551 . - . ID=gene-LDO45_RS04085;Name=LDO45_RS04085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04085;old_locus_tag=BDI4_120004 NZ_CAJZAS010000024.1 Protein Homology CDS 1304 2551 . - 0 ID=cds-WP_223960174.1;Parent=gene-LDO45_RS04085;Dbxref=GenBank:WP_223960174.1;Name=WP_223960174.1;Ontology_term=GO:0003885,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=D-arabinono-1%2C4-lactone oxidase activity|0003885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749448.1;locus_tag=LDO45_RS04085;product=D-arabinono-1%2C4-lactone oxidase;protein_id=WP_223960174.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 2813 3838 . + . ID=gene-LDO45_RS04090;Name=LDO45_RS04090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04090;old_locus_tag=BDI4_120003 NZ_CAJZAS010000024.1 Protein Homology CDS 2813 3838 . + 0 ID=cds-WP_059818393.1;Parent=gene-LDO45_RS04090;Dbxref=GenBank:WP_059818393.1;Name=WP_059818393.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749447.1;locus_tag=LDO45_RS04090;product=helix-turn-helix domain-containing protein;protein_id=WP_059818393.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 3986 4375 . - . ID=gene-LDO45_RS04095;Name=LDO45_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04095;old_locus_tag=BDI4_120006 NZ_CAJZAS010000024.1 Protein Homology CDS 3986 4375 . - 0 ID=cds-WP_223960176.1;Parent=gene-LDO45_RS04095;Dbxref=GenBank:WP_223960176.1;Name=WP_223960176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760115.1;locus_tag=LDO45_RS04095;product=2-oxoglutarate dehydrogenase;protein_id=WP_223960176.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 4459 6309 . - . ID=gene-LDO45_RS04100;Name=LDO45_RS04100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04100;old_locus_tag=BDI4_120007 NZ_CAJZAS010000024.1 Protein Homology CDS 4459 6309 . - 0 ID=cds-WP_223960178.1;Parent=gene-LDO45_RS04100;Dbxref=GenBank:WP_223960178.1;Name=WP_223960178.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760114.1;locus_tag=LDO45_RS04100;product=peptidase S10;protein_id=WP_223960178.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 7058 8869 . - . ID=gene-LDO45_RS04105;Name=LDO45_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04105;old_locus_tag=BDI4_120009 NZ_CAJZAS010000024.1 Protein Homology CDS 7058 8869 . - 0 ID=cds-WP_223960180.1;Parent=gene-LDO45_RS04105;Dbxref=GenBank:WP_223960180.1;Name=WP_223960180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356351.1;locus_tag=LDO45_RS04105;product=ExeM/NucH family extracellular endonuclease;protein_id=WP_223960180.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 9059 10000 . - . ID=gene-LDO45_RS04110;Name=LDO45_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04110;old_locus_tag=BDI4_120010 NZ_CAJZAS010000024.1 Protein Homology CDS 9059 10000 . - 0 ID=cds-WP_223960182.1;Parent=gene-LDO45_RS04110;Dbxref=GenBank:WP_223960182.1;Name=WP_223960182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760112.1;locus_tag=LDO45_RS04110;product=copper resistance D family protein;protein_id=WP_223960182.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 9997 10377 . - . ID=gene-LDO45_RS04115;Name=copC;gbkey=Gene;gene=copC;gene_biotype=protein_coding;locus_tag=LDO45_RS04115;old_locus_tag=BDI4_120011 NZ_CAJZAS010000024.1 Protein Homology CDS 9997 10377 . - 0 ID=cds-WP_223960184.1;Parent=gene-LDO45_RS04115;Dbxref=GenBank:WP_223960184.1;Name=WP_223960184.1;Ontology_term=GO:0006825,GO:0005507,GO:0042597;gbkey=CDS;gene=copC;go_component=periplasmic space|0042597||IEA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356353.1;locus_tag=LDO45_RS04115;product=copper homeostasis periplasmic binding protein CopC;protein_id=WP_223960184.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 10392 10739 . - . ID=gene-LDO45_RS04120;Name=LDO45_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04120;old_locus_tag=BDI4_120012 NZ_CAJZAS010000024.1 Protein Homology CDS 10392 10739 . - 0 ID=cds-WP_059692489.1;Parent=gene-LDO45_RS04120;Dbxref=GenBank:WP_059692489.1;Name=WP_059692489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548385.1;locus_tag=LDO45_RS04120;product=copper-binding protein;protein_id=WP_059692489.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 10813 12108 . - . ID=gene-LDO45_RS04125;Name=LDO45_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04125;old_locus_tag=BDI4_120013 NZ_CAJZAS010000024.1 Protein Homology CDS 10813 12108 . - 0 ID=cds-WP_059692490.1;Parent=gene-LDO45_RS04125;Dbxref=GenBank:WP_059692490.1;Name=WP_059692490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900415.1;locus_tag=LDO45_RS04125;product=multicopper oxidase family protein;protein_id=WP_059692490.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 12110 13588 . - . ID=gene-LDO45_RS04130;Name=LDO45_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04130;old_locus_tag=BDI4_120014 NZ_CAJZAS010000024.1 Protein Homology CDS 12110 13588 . - 0 ID=cds-WP_223960186.1;Parent=gene-LDO45_RS04130;Dbxref=GenBank:WP_223960186.1;Name=WP_223960186.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495801.1;locus_tag=LDO45_RS04130;product=TolC family protein;protein_id=WP_223960186.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 13585 13878 . - . ID=gene-LDO45_RS04135;Name=LDO45_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04135;old_locus_tag=BDI4_120015 NZ_CAJZAS010000024.1 Protein Homology CDS 13585 13878 . - 0 ID=cds-WP_223960188.1;Parent=gene-LDO45_RS04135;Dbxref=GenBank:WP_223960188.1;Name=WP_223960188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660117.1;locus_tag=LDO45_RS04135;product=hypothetical protein;protein_id=WP_223960188.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 13967 14347 . - . ID=gene-LDO45_RS04140;Name=LDO45_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04140;old_locus_tag=BDI4_120016 NZ_CAJZAS010000024.1 Protein Homology CDS 13967 14347 . - 0 ID=cds-WP_223960190.1;Parent=gene-LDO45_RS04140;Dbxref=GenBank:WP_223960190.1;Name=WP_223960190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365253.1;locus_tag=LDO45_RS04140;product=hypothetical protein;protein_id=WP_223960190.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 14614 15285 . + . ID=gene-LDO45_RS04145;Name=LDO45_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04145;old_locus_tag=BDI4_120017 NZ_CAJZAS010000024.1 Protein Homology CDS 14614 15285 . + 0 ID=cds-WP_059533764.1;Parent=gene-LDO45_RS04145;Dbxref=GenBank:WP_059533764.1;Name=WP_059533764.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660115.1;locus_tag=LDO45_RS04145;product=heavy metal response regulator transcription factor;protein_id=WP_059533764.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 15282 16697 . + . ID=gene-LDO45_RS04150;Name=LDO45_RS04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04150;old_locus_tag=BDI4_120018 NZ_CAJZAS010000024.1 Protein Homology CDS 15282 16697 . + 0 ID=cds-WP_223960192.1;Parent=gene-LDO45_RS04150;Dbxref=GenBank:WP_223960192.1;Name=WP_223960192.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900420.1;locus_tag=LDO45_RS04150;product=heavy metal sensor histidine kinase;protein_id=WP_223960192.1;transl_table=11 NZ_CAJZAS010000024.1 cmsearch riboswitch 16812 16987 . + . ID=id-NZ_CAJZAS010000024.1:16812..16987;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAS010000024.1 RefSeq gene 17079 18089 . + . ID=gene-LDO45_RS04155;Name=LDO45_RS04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04155;old_locus_tag=BDI4_120020 NZ_CAJZAS010000024.1 Protein Homology CDS 17079 18089 . + 0 ID=cds-WP_059698842.1;Parent=gene-LDO45_RS04155;Dbxref=GenBank:WP_059698842.1;Name=WP_059698842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881283.1;locus_tag=LDO45_RS04155;product=sodium:calcium antiporter;protein_id=WP_059698842.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 18157 18525 . - . ID=gene-LDO45_RS04160;Name=LDO45_RS04160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04160;old_locus_tag=BDI4_120021 NZ_CAJZAS010000024.1 Protein Homology CDS 18157 18525 . - 0 ID=cds-WP_223960194.1;Parent=gene-LDO45_RS04160;Dbxref=GenBank:WP_223960194.1;Name=WP_223960194.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484513.1;locus_tag=LDO45_RS04160;product=copper-binding protein;protein_id=WP_223960194.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 18522 21728 . - . ID=gene-LDO45_RS04165;Name=LDO45_RS04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04165;old_locus_tag=BDI4_120022 NZ_CAJZAS010000024.1 Protein Homology CDS 18522 21728 . - 0 ID=cds-WP_223960196.1;Parent=gene-LDO45_RS04165;Dbxref=GenBank:WP_223960196.1;Name=WP_223960196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338825.1;locus_tag=LDO45_RS04165;product=efflux RND transporter permease subunit;protein_id=WP_223960196.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 21725 23236 . - . ID=gene-LDO45_RS04170;Name=LDO45_RS04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04170;old_locus_tag=BDI4_120023 NZ_CAJZAS010000024.1 Protein Homology CDS 21725 23236 . - 0 ID=cds-WP_223960198.1;Parent=gene-LDO45_RS04170;Dbxref=GenBank:WP_223960198.1;Name=WP_223960198.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548398.1;locus_tag=LDO45_RS04170;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_223960198.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 23248 24540 . - . ID=gene-LDO45_RS04175;Name=LDO45_RS04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04175;old_locus_tag=BDI4_120024 NZ_CAJZAS010000024.1 Protein Homology CDS 23248 24540 . - 0 ID=cds-WP_223960200.1;Parent=gene-LDO45_RS04175;Dbxref=GenBank:WP_223960200.1;Name=WP_223960200.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484631.1;locus_tag=LDO45_RS04175;product=TolC family protein;protein_id=WP_223960200.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 24632 25012 . - . ID=gene-LDO45_RS04180;Name=LDO45_RS04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04180;old_locus_tag=BDI4_120025 NZ_CAJZAS010000024.1 Protein Homology CDS 24632 25012 . - 0 ID=cds-WP_223960202.1;Parent=gene-LDO45_RS04180;Dbxref=GenBank:WP_223960202.1;Name=WP_223960202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484529.1;locus_tag=LDO45_RS04180;product=hypothetical protein;protein_id=WP_223960202.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 25272 25454 . + . ID=gene-LDO45_RS34485;Name=LDO45_RS34485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34485;old_locus_tag=BDI4_120026 NZ_CAJZAS010000024.1 Protein Homology CDS 25272 25454 . + 0 ID=cds-WP_223960204.1;Parent=gene-LDO45_RS34485;Dbxref=GenBank:WP_223960204.1;Name=WP_223960204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479865.1;locus_tag=LDO45_RS34485;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_223960204.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 25476 25844 . + . ID=gene-LDO45_RS04190;Name=LDO45_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04190;old_locus_tag=BDI4_120027 NZ_CAJZAS010000024.1 Protein Homology CDS 25476 25844 . + 0 ID=cds-WP_059533748.1;Parent=gene-LDO45_RS04190;Dbxref=GenBank:WP_059533748.1;Name=WP_059533748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881280.1;locus_tag=LDO45_RS04190;product=hypothetical protein;protein_id=WP_059533748.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 26004 26924 . - . ID=gene-LDO45_RS04195;Name=LDO45_RS04195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04195;old_locus_tag=BDI4_120028 NZ_CAJZAS010000024.1 Protein Homology CDS 26004 26924 . - 0 ID=cds-WP_059692501.1;Parent=gene-LDO45_RS04195;Dbxref=GenBank:WP_059692501.1;Name=WP_059692501.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217687.1;locus_tag=LDO45_RS04195;product=LysR family transcriptional regulator;protein_id=WP_059692501.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 27062 28522 . - . ID=gene-LDO45_RS04200;Name=LDO45_RS04200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04200;old_locus_tag=BDI4_120029 NZ_CAJZAS010000024.1 Protein Homology CDS 27062 28522 . - 0 ID=cds-WP_223960206.1;Parent=gene-LDO45_RS04200;Dbxref=GenBank:WP_223960206.1;Name=WP_223960206.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397740.1;locus_tag=LDO45_RS04200;product=FAD-binding oxidoreductase;protein_id=WP_223960206.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 28757 29101 . - . ID=gene-LDO45_RS04205;Name=LDO45_RS04205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04205;old_locus_tag=BDI4_120031 NZ_CAJZAS010000024.1 Protein Homology CDS 28757 29101 . - 0 ID=cds-WP_223960208.1;Parent=gene-LDO45_RS04205;Dbxref=GenBank:WP_223960208.1;Name=WP_223960208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397739.1;locus_tag=LDO45_RS04205;product=cupin domain-containing protein;protein_id=WP_223960208.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 29299 30168 . + . ID=gene-LDO45_RS04210;Name=LDO45_RS04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04210;old_locus_tag=BDI4_120033 NZ_CAJZAS010000024.1 Protein Homology CDS 29299 30168 . + 0 ID=cds-WP_059533742.1;Parent=gene-LDO45_RS04210;Dbxref=GenBank:WP_059533742.1;Name=WP_059533742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356377.1;locus_tag=LDO45_RS04210;product=helix-turn-helix transcriptional regulator;protein_id=WP_059533742.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 30334 31284 . + . ID=gene-LDO45_RS04215;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=LDO45_RS04215;old_locus_tag=BDI4_120034 NZ_CAJZAS010000024.1 Protein Homology CDS 30334 31284 . + 0 ID=cds-WP_223960210.1;Parent=gene-LDO45_RS04215;Dbxref=GenBank:WP_223960210.1;Name=WP_223960210.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900442.1;locus_tag=LDO45_RS04215;product=agmatinase;protein_id=WP_223960210.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 31307 32788 . + . ID=gene-LDO45_RS04220;Name=LDO45_RS04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04220;old_locus_tag=BDI4_120035 NZ_CAJZAS010000024.1 Protein Homology CDS 31307 32788 . + 0 ID=cds-WP_223960212.1;Parent=gene-LDO45_RS04220;Dbxref=GenBank:WP_223960212.1;Name=WP_223960212.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404465.1;locus_tag=LDO45_RS04220;product=aldehyde dehydrogenase family protein;protein_id=WP_223960212.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 32861 33265 . - . ID=gene-LDO45_RS04225;Name=LDO45_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04225;old_locus_tag=BDI4_120036 NZ_CAJZAS010000024.1 Protein Homology CDS 32861 33265 . - 0 ID=cds-WP_223960214.1;Parent=gene-LDO45_RS04225;Dbxref=GenBank:WP_223960214.1;Name=WP_223960214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007732117.1;locus_tag=LDO45_RS04225;product=nuclear transport factor 2 family protein;protein_id=WP_223960214.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq pseudogene 33509 33685 . + . ID=gene-LDO45_RS04230;Name=LDO45_RS04230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS04230;partial=true;pseudo=true;start_range=.,33509 NZ_CAJZAS010000024.1 Protein Homology CDS 33509 33685 . + 0 ID=cds-LDO45_RS04230;Parent=gene-LDO45_RS04230;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482220.1;locus_tag=LDO45_RS04230;partial=true;product=hypothetical protein;pseudo=true;start_range=.,33509;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 33853 33990 . + . ID=gene-LDO45_RS04235;Name=LDO45_RS04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04235 NZ_CAJZAS010000024.1 GeneMarkS-2+ CDS 33853 33990 . + 0 ID=cds-WP_223960215.1;Parent=gene-LDO45_RS04235;Dbxref=GenBank:WP_223960215.1;Name=WP_223960215.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS04235;product=hypothetical protein;protein_id=WP_223960215.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 34095 36545 . + . ID=gene-LDO45_RS04240;Name=LDO45_RS04240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04240;old_locus_tag=BDI4_120038 NZ_CAJZAS010000024.1 Protein Homology CDS 34095 36545 . + 0 ID=cds-WP_059692509.1;Parent=gene-LDO45_RS04240;Dbxref=GenBank:WP_059692509.1;Name=WP_059692509.1;Ontology_term=GO:0034480;gbkey=CDS;go_function=phosphatidylcholine phospholipase C activity|0034480||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495833.1;locus_tag=LDO45_RS04240;product=phosphocholine-specific phospholipase C;protein_id=WP_059692509.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 37036 37626 . + . ID=gene-LDO45_RS04245;Name=LDO45_RS04245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04245;old_locus_tag=BDI4_120040 NZ_CAJZAS010000024.1 Protein Homology CDS 37036 37626 . + 0 ID=cds-WP_223960217.1;Parent=gene-LDO45_RS04245;Dbxref=GenBank:WP_223960217.1;Name=WP_223960217.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749420.1;locus_tag=LDO45_RS04245;product=N-acetyltransferase;protein_id=WP_223960217.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 37663 38448 . - . ID=gene-LDO45_RS04250;Name=tam;gbkey=Gene;gene=tam;gene_biotype=protein_coding;locus_tag=LDO45_RS04250;old_locus_tag=BDI4_120041 NZ_CAJZAS010000024.1 Protein Homology CDS 37663 38448 . - 0 ID=cds-WP_059818427.1;Parent=gene-LDO45_RS04250;Dbxref=GenBank:WP_059818427.1;Name=WP_059818427.1;Ontology_term=GO:0030798;gbkey=CDS;gene=tam;go_function=trans-aconitate 2-methyltransferase activity|0030798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495838.1;locus_tag=LDO45_RS04250;product=trans-aconitate 2-methyltransferase;protein_id=WP_059818427.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 38571 39467 . + . ID=gene-LDO45_RS04255;Name=LDO45_RS04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04255;old_locus_tag=BDI4_120042 NZ_CAJZAS010000024.1 Protein Homology CDS 38571 39467 . + 0 ID=cds-WP_223960398.1;Parent=gene-LDO45_RS04255;Dbxref=GenBank:WP_223960398.1;Name=WP_223960398.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365235.1;locus_tag=LDO45_RS04255;product=LysR family transcriptional regulator;protein_id=WP_223960398.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 39484 39918 . - . ID=gene-LDO45_RS04260;Name=LDO45_RS04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04260;old_locus_tag=BDI4_120043 NZ_CAJZAS010000024.1 Protein Homology CDS 39484 39918 . - 0 ID=cds-WP_223960219.1;Parent=gene-LDO45_RS04260;Dbxref=GenBank:WP_223960219.1;Name=WP_223960219.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365234.1;locus_tag=LDO45_RS04260;product=N-acetyltransferase;protein_id=WP_223960219.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 40134 40334 . - . ID=gene-LDO45_RS04265;Name=LDO45_RS04265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04265;old_locus_tag=BDI4_120044 NZ_CAJZAS010000024.1 Protein Homology CDS 40134 40334 . - 0 ID=cds-WP_059692512.1;Parent=gene-LDO45_RS04265;Dbxref=GenBank:WP_059692512.1;Name=WP_059692512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749416.1;locus_tag=LDO45_RS04265;product=hypothetical protein;protein_id=WP_059692512.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 40365 41684 . - . ID=gene-LDO45_RS04270;Name=LDO45_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04270;old_locus_tag=BDI4_120045 NZ_CAJZAS010000024.1 Protein Homology CDS 40365 41684 . - 0 ID=cds-WP_059533714.1;Parent=gene-LDO45_RS04270;Dbxref=GenBank:WP_059533714.1;Name=WP_059533714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404467.1;locus_tag=LDO45_RS04270;product=DUF3422 family protein;protein_id=WP_059533714.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 41846 42721 . + . ID=gene-LDO45_RS04275;Name=LDO45_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04275;old_locus_tag=BDI4_120046 NZ_CAJZAS010000024.1 Protein Homology CDS 41846 42721 . + 0 ID=cds-WP_044848057.1;Parent=gene-LDO45_RS04275;Dbxref=GenBank:WP_044848057.1;Name=WP_044848057.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397730.1;locus_tag=LDO45_RS04275;product=LysR family transcriptional regulator;protein_id=WP_044848057.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 42755 43321 . - . ID=gene-LDO45_RS04280;Name=LDO45_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04280;old_locus_tag=BDI4_120047 NZ_CAJZAS010000024.1 Protein Homology CDS 42755 43321 . - 0 ID=cds-WP_223960221.1;Parent=gene-LDO45_RS04280;Dbxref=GenBank:WP_223960221.1;Name=WP_223960221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660091.1;locus_tag=LDO45_RS04280;product=hypothetical protein;protein_id=WP_223960221.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 43426 43806 . - . ID=gene-LDO45_RS04285;Name=LDO45_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04285;old_locus_tag=BDI4_120048 NZ_CAJZAS010000024.1 Protein Homology CDS 43426 43806 . - 0 ID=cds-WP_223960223.1;Parent=gene-LDO45_RS04285;Dbxref=GenBank:WP_223960223.1;Name=WP_223960223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548417.1;locus_tag=LDO45_RS04285;product=hypothetical protein;protein_id=WP_223960223.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 44238 45377 . + . ID=gene-LDO45_RS04290;Name=LDO45_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04290;old_locus_tag=BDI4_120050 NZ_CAJZAS010000024.1 Protein Homology CDS 44238 45377 . + 0 ID=cds-WP_223960225.1;Parent=gene-LDO45_RS04290;Dbxref=GenBank:WP_223960225.1;Name=WP_223960225.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660090.1;locus_tag=LDO45_RS04290;product=acyltransferase;protein_id=WP_223960225.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 45435 46025 . - . ID=gene-LDO45_RS04295;Name=LDO45_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04295;old_locus_tag=BDI4_120051 NZ_CAJZAS010000024.1 Protein Homology CDS 45435 46025 . - 0 ID=cds-WP_059692532.1;Parent=gene-LDO45_RS04295;Dbxref=GenBank:WP_059692532.1;Name=WP_059692532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365221.1;locus_tag=LDO45_RS04295;product=class I SAM-dependent methyltransferase;protein_id=WP_059692532.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 46248 47231 . - . ID=gene-LDO45_RS04300;Name=LDO45_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04300;old_locus_tag=BDI4_120052 NZ_CAJZAS010000024.1 Protein Homology CDS 46248 47231 . - 0 ID=cds-WP_059533706.1;Parent=gene-LDO45_RS04300;Dbxref=GenBank:WP_059533706.1;Name=WP_059533706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011492457.1;locus_tag=LDO45_RS04300;product=aldo/keto reductase;protein_id=WP_059533706.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 47352 48269 . + . ID=gene-LDO45_RS04305;Name=LDO45_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04305;old_locus_tag=BDI4_120053 NZ_CAJZAS010000024.1 Protein Homology CDS 47352 48269 . + 0 ID=cds-WP_059818439.1;Parent=gene-LDO45_RS04305;Dbxref=GenBank:WP_059818439.1;Name=WP_059818439.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011492456.1;locus_tag=LDO45_RS04305;product=LysR family transcriptional regulator;protein_id=WP_059818439.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 48292 50013 . - . ID=gene-LDO45_RS04310;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=LDO45_RS04310;old_locus_tag=BDI4_120054 NZ_CAJZAS010000024.1 Protein Homology CDS 48292 50013 . - 0 ID=cds-WP_223960400.1;Parent=gene-LDO45_RS04310;Dbxref=GenBank:WP_223960400.1;Name=WP_223960400.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762136.1;locus_tag=LDO45_RS04310;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_223960400.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 50218 50718 . - . ID=gene-LDO45_RS04315;Name=LDO45_RS04315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04315;old_locus_tag=BDI4_120055 NZ_CAJZAS010000024.1 Protein Homology CDS 50218 50718 . - 0 ID=cds-WP_223960226.1;Parent=gene-LDO45_RS04315;Dbxref=GenBank:WP_223960226.1;Name=WP_223960226.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762135.1;locus_tag=LDO45_RS04315;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_223960226.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 50910 51926 . + . ID=gene-LDO45_RS04320;Name=LDO45_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04320;old_locus_tag=BDI4_120056 NZ_CAJZAS010000024.1 Protein Homology CDS 50910 51926 . + 0 ID=cds-WP_059692533.1;Parent=gene-LDO45_RS04320;Dbxref=GenBank:WP_059692533.1;Name=WP_059692533.1;Ontology_term=GO:0009310,GO:0008660,GO:0030170;gbkey=CDS;go_function=1-aminocyclopropane-1-carboxylate deaminase activity|0008660||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=amine catabolic process|0009310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099870.1;locus_tag=LDO45_RS04320;product=1-aminocyclopropane-1-carboxylate deaminase;protein_id=WP_059692533.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq pseudogene 51948 52225 . - . ID=gene-LDO45_RS34375;Name=LDO45_RS34375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34375;partial=true;pseudo=true;start_range=.,51948 NZ_CAJZAS010000024.1 Protein Homology CDS 51948 52225 . - 0 ID=cds-LDO45_RS34375;Parent=gene-LDO45_RS34375;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481462.1;locus_tag=LDO45_RS34375;partial=true;product=sel1 repeat family protein;pseudo=true;start_range=.,51948;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 52562 53440 . + . ID=gene-LDO45_RS04330;Name=LDO45_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04330;old_locus_tag=BDI4_120057 NZ_CAJZAS010000024.1 Protein Homology CDS 52562 53440 . + 0 ID=cds-WP_059698780.1;Parent=gene-LDO45_RS04330;Dbxref=GenBank:WP_059698780.1;Name=WP_059698780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760897.1;locus_tag=LDO45_RS04330;product=helix-turn-helix domain-containing protein;protein_id=WP_059698780.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 53488 53988 . + . ID=gene-LDO45_RS04335;Name=LDO45_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04335;old_locus_tag=BDI4_120058 NZ_CAJZAS010000024.1 Protein Homology CDS 53488 53988 . + 0 ID=cds-WP_059533695.1;Parent=gene-LDO45_RS04335;Dbxref=GenBank:WP_059533695.1;Name=WP_059533695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543980.1;locus_tag=LDO45_RS04335;product=molybdopterin-dependent oxidoreductase;protein_id=WP_059533695.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 53998 55809 . + . ID=gene-LDO45_RS04340;Name=atsR;gbkey=Gene;gene=atsR;gene_biotype=protein_coding;locus_tag=LDO45_RS04340;old_locus_tag=BDI4_120059 NZ_CAJZAS010000024.1 Protein Homology CDS 53998 55809 . + 0 ID=cds-WP_059533693.1;Parent=gene-LDO45_RS04340;Dbxref=GenBank:WP_059533693.1;Name=WP_059533693.1;Note=AtsR signifies Adherence and T6SS Regulator.;gbkey=CDS;gene=atsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397681.1;locus_tag=LDO45_RS04340;product=hybrid sensor histidine kinase/response regulator AtsR;protein_id=WP_059533693.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 55867 56286 . - . ID=gene-LDO45_RS04345;Name=LDO45_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04345;old_locus_tag=BDI4_120060 NZ_CAJZAS010000024.1 Protein Homology CDS 55867 56286 . - 0 ID=cds-WP_059464957.1;Parent=gene-LDO45_RS04345;Dbxref=GenBank:WP_059464957.1;Name=WP_059464957.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255409.1;locus_tag=LDO45_RS04345;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_059464957.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 56297 56623 . - . ID=gene-LDO45_RS04350;Name=LDO45_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04350 NZ_CAJZAS010000024.1 Protein Homology CDS 56297 56623 . - 0 ID=cds-WP_059533691.1;Parent=gene-LDO45_RS04350;Dbxref=GenBank:WP_059533691.1;Name=WP_059533691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485487.1;locus_tag=LDO45_RS04350;product=thioredoxin family protein;protein_id=WP_059533691.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 56838 57530 . + . ID=gene-LDO45_RS04355;Name=LDO45_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04355;old_locus_tag=BDI4_120062 NZ_CAJZAS010000024.1 Protein Homology CDS 56838 57530 . + 0 ID=cds-WP_059533689.1;Parent=gene-LDO45_RS04355;Dbxref=GenBank:WP_059533689.1;Name=WP_059533689.1;Ontology_term=GO:0010181,GO:0016646;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on the CH-NH group of donors%2C NAD or NADP as acceptor|0016646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485480.1;locus_tag=LDO45_RS04355;product=flavin reductase family protein;protein_id=WP_059533689.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 57575 57907 . + . ID=gene-LDO45_RS04360;Name=LDO45_RS04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04360;old_locus_tag=BDI4_120063 NZ_CAJZAS010000024.1 Protein Homology CDS 57575 57907 . + 0 ID=cds-WP_059533687.1;Parent=gene-LDO45_RS04360;Dbxref=GenBank:WP_059533687.1;Name=WP_059533687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330686.1;locus_tag=LDO45_RS04360;product=DUF2322 family protein;protein_id=WP_059533687.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 57970 58830 . + . ID=gene-LDO45_RS04365;Name=LDO45_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04365;old_locus_tag=BDI4_120064 NZ_CAJZAS010000024.1 Protein Homology CDS 57970 58830 . + 0 ID=cds-WP_223960230.1;Parent=gene-LDO45_RS04365;Dbxref=GenBank:WP_223960230.1;Name=WP_223960230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486297.1;locus_tag=LDO45_RS04365;product=hypothetical protein;protein_id=WP_223960230.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 59017 59649 . + . ID=gene-LDO45_RS04370;Name=LDO45_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04370;old_locus_tag=BDI4_120065 NZ_CAJZAS010000024.1 Protein Homology CDS 59017 59649 . + 0 ID=cds-WP_223960232.1;Parent=gene-LDO45_RS04370;Dbxref=GenBank:WP_223960232.1;Name=WP_223960232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494613.1;locus_tag=LDO45_RS04370;product=LysE family translocator;protein_id=WP_223960232.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 59900 60469 . - . ID=gene-LDO45_RS04375;Name=LDO45_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04375;old_locus_tag=BDI4_120067 NZ_CAJZAS010000024.1 Protein Homology CDS 59900 60469 . - 0 ID=cds-WP_059685249.1;Parent=gene-LDO45_RS04375;Dbxref=GenBank:WP_059685249.1;Name=WP_059685249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188099.1;locus_tag=LDO45_RS04375;product=hypothetical protein;protein_id=WP_059685249.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 60689 61147 . - . ID=gene-LDO45_RS04380;Name=LDO45_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04380;old_locus_tag=BDI4_120069 NZ_CAJZAS010000024.1 Protein Homology CDS 60689 61147 . - 0 ID=cds-WP_006486309.1;Parent=gene-LDO45_RS04380;Dbxref=GenBank:WP_006486309.1;Name=WP_006486309.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330690.1;locus_tag=LDO45_RS04380;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_006486309.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 61273 62010 . + . ID=gene-LDO45_RS04385;Name=LDO45_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04385;old_locus_tag=BDI4_120071 NZ_CAJZAS010000024.1 Protein Homology CDS 61273 62010 . + 0 ID=cds-WP_223960234.1;Parent=gene-LDO45_RS04385;Dbxref=GenBank:WP_223960234.1;Name=WP_223960234.1;Ontology_term=GO:0006865,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660066.1;locus_tag=LDO45_RS04385;product=AzlC family ABC transporter permease;protein_id=WP_223960234.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 62000 62302 . + . ID=gene-LDO45_RS04390;Name=LDO45_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04390;old_locus_tag=BDI4_120072 NZ_CAJZAS010000024.1 Protein Homology CDS 62000 62302 . + 0 ID=cds-WP_082721853.1;Parent=gene-LDO45_RS04390;Dbxref=GenBank:WP_082721853.1;Name=WP_082721853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900507.1;locus_tag=LDO45_RS04390;product=AzlD family protein;protein_id=WP_082721853.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 62509 63288 . + . ID=gene-LDO45_RS04395;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=LDO45_RS04395;old_locus_tag=BDI4_120073 NZ_CAJZAS010000024.1 Protein Homology CDS 62509 63288 . + 0 ID=cds-WP_223960236.1;Parent=gene-LDO45_RS04395;Dbxref=GenBank:WP_223960236.1;Name=WP_223960236.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548440.1;locus_tag=LDO45_RS04395;product=5'/3'-nucleotidase SurE;protein_id=WP_223960236.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 63350 64171 . - . ID=gene-LDO45_RS04400;Name=LDO45_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04400;old_locus_tag=BDI4_120074 NZ_CAJZAS010000024.1 Protein Homology CDS 63350 64171 . - 0 ID=cds-WP_059698768.1;Parent=gene-LDO45_RS04400;Dbxref=GenBank:WP_059698768.1;Name=WP_059698768.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749366.1;locus_tag=LDO45_RS04400;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_059698768.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 64241 64708 . - . ID=gene-LDO45_RS04405;Name=LDO45_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04405;old_locus_tag=BDI4_120075 NZ_CAJZAS010000024.1 Protein Homology CDS 64241 64708 . - 0 ID=cds-WP_223960238.1;Parent=gene-LDO45_RS04405;Dbxref=GenBank:WP_223960238.1;Name=WP_223960238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488377.1;locus_tag=LDO45_RS04405;product=cupin domain-containing protein;protein_id=WP_223960238.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 64849 66201 . - . ID=gene-LDO45_RS04410;Name=LDO45_RS04410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04410;old_locus_tag=BDI4_120076 NZ_CAJZAS010000024.1 Protein Homology CDS 64849 66201 . - 0 ID=cds-WP_223960240.1;Parent=gene-LDO45_RS04410;Dbxref=GenBank:WP_223960240.1;Name=WP_223960240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494623.1;locus_tag=LDO45_RS04410;product=pyridoxal-dependent decarboxylase;protein_id=WP_223960240.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 66222 66521 . - . ID=gene-LDO45_RS04415;Name=LDO45_RS04415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04415;old_locus_tag=BDI4_120077 NZ_CAJZAS010000024.1 Protein Homology CDS 66222 66521 . - 0 ID=cds-WP_059533672.1;Parent=gene-LDO45_RS04415;Dbxref=GenBank:WP_059533672.1;Name=WP_059533672.1;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749362.1;locus_tag=LDO45_RS04415;product=helix-turn-helix transcriptional regulator;protein_id=WP_059533672.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 66713 67600 . - . ID=gene-LDO45_RS04420;Name=LDO45_RS04420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04420;old_locus_tag=BDI4_120078 NZ_CAJZAS010000024.1 Protein Homology CDS 66713 67600 . - 0 ID=cds-WP_059692541.1;Parent=gene-LDO45_RS04420;Dbxref=GenBank:WP_059692541.1;Name=WP_059692541.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660060.1;locus_tag=LDO45_RS04420;product=LysR family transcriptional regulator;protein_id=WP_059692541.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 67728 68765 . + . ID=gene-LDO45_RS04425;Name=LDO45_RS04425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04425;old_locus_tag=BDI4_120079 NZ_CAJZAS010000024.1 Protein Homology CDS 67728 68765 . + 0 ID=cds-WP_059692542.1;Parent=gene-LDO45_RS04425;Dbxref=GenBank:WP_059692542.1;Name=WP_059692542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548452.1;locus_tag=LDO45_RS04425;product=aldo/keto reductase;protein_id=WP_059692542.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 68820 70304 . - . ID=gene-LDO45_RS04430;Name=LDO45_RS04430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04430;old_locus_tag=BDI4_120080 NZ_CAJZAS010000024.1 Protein Homology CDS 68820 70304 . - 0 ID=cds-WP_223960242.1;Parent=gene-LDO45_RS04430;Dbxref=GenBank:WP_223960242.1;Name=WP_223960242.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365178.1;locus_tag=LDO45_RS04430;product=PLP-dependent aminotransferase family protein;protein_id=WP_223960242.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 70436 70912 . + . ID=gene-LDO45_RS04435;Name=LDO45_RS04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04435;old_locus_tag=BDI4_120081 NZ_CAJZAS010000024.1 Protein Homology CDS 70436 70912 . + 0 ID=cds-WP_059692544.1;Parent=gene-LDO45_RS04435;Dbxref=GenBank:WP_059692544.1;Name=WP_059692544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761363.1;locus_tag=LDO45_RS04435;product=GNAT family N-acetyltransferase;protein_id=WP_059692544.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 70944 71669 . - . ID=gene-LDO45_RS04440;Name=LDO45_RS04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04440;old_locus_tag=BDI4_120082 NZ_CAJZAS010000024.1 Protein Homology CDS 70944 71669 . - 0 ID=cds-WP_223960244.1;Parent=gene-LDO45_RS04440;Dbxref=GenBank:WP_223960244.1;Name=WP_223960244.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660056.1;locus_tag=LDO45_RS04440;product=methyltransferase domain-containing protein;protein_id=WP_223960244.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 71886 72899 . + . ID=gene-LDO45_RS04445;Name=LDO45_RS04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04445;old_locus_tag=BDI4_120083 NZ_CAJZAS010000024.1 Protein Homology CDS 71886 72899 . + 0 ID=cds-WP_223960246.1;Parent=gene-LDO45_RS04445;Dbxref=GenBank:WP_223960246.1;Name=WP_223960246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900519.1;locus_tag=LDO45_RS04445;product=hypothetical protein;protein_id=WP_223960246.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 73129 73938 . + . ID=gene-LDO45_RS04450;Name=LDO45_RS04450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04450;old_locus_tag=BDI4_120084 NZ_CAJZAS010000024.1 Protein Homology CDS 73129 73938 . + 0 ID=cds-WP_223960247.1;Parent=gene-LDO45_RS04450;Dbxref=GenBank:WP_223960247.1;Name=WP_223960247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548463.1;locus_tag=LDO45_RS04450;product=TlpA disulfide reductase family protein;protein_id=WP_223960247.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 74035 74439 . - . ID=gene-LDO45_RS04455;Name=LDO45_RS04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04455;old_locus_tag=BDI4_120085 NZ_CAJZAS010000024.1 Protein Homology CDS 74035 74439 . - 0 ID=cds-WP_059533657.1;Parent=gene-LDO45_RS04455;Dbxref=GenBank:WP_059533657.1;Name=WP_059533657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756235.1;locus_tag=LDO45_RS04455;product=hypothetical protein;protein_id=WP_059533657.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 74587 74868 . - . ID=gene-LDO45_RS04460;Name=LDO45_RS04460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04460 NZ_CAJZAS010000024.1 GeneMarkS-2+ CDS 74587 74868 . - 0 ID=cds-WP_223960249.1;Parent=gene-LDO45_RS04460;Dbxref=GenBank:WP_223960249.1;Name=WP_223960249.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS04460;product=hypothetical protein;protein_id=WP_223960249.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 74888 75277 . + . ID=gene-LDO45_RS04465;Name=LDO45_RS04465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04465;old_locus_tag=BDI4_120086 NZ_CAJZAS010000024.1 Protein Homology CDS 74888 75277 . + 0 ID=cds-WP_059533655.1;Parent=gene-LDO45_RS04465;Dbxref=GenBank:WP_059533655.1;Name=WP_059533655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404505.1;locus_tag=LDO45_RS04465;product=fucose-binding lectin II;protein_id=WP_059533655.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 75399 76133 . + . ID=gene-LDO45_RS04470;Name=LDO45_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04470;old_locus_tag=BDI4_120087 NZ_CAJZAS010000024.1 Protein Homology CDS 75399 76133 . + 0 ID=cds-WP_059533653.1;Parent=gene-LDO45_RS04470;Dbxref=GenBank:WP_059533653.1;Name=WP_059533653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548596.1;locus_tag=LDO45_RS04470;product=fucose-binding lectin II;protein_id=WP_059533653.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 76508 77383 . + . ID=gene-LDO45_RS04475;Name=LDO45_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04475;old_locus_tag=BDI4_120088 NZ_CAJZAS010000024.1 Protein Homology CDS 76508 77383 . + 0 ID=cds-WP_059533650.1;Parent=gene-LDO45_RS04475;Dbxref=GenBank:WP_059533650.1;Name=WP_059533650.1;Ontology_term=GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756238.1;locus_tag=LDO45_RS04475;product=mechanosensitive ion channel family protein;protein_id=WP_059533650.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 77509 77829 . + . ID=gene-LDO45_RS04480;Name=LDO45_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04480;old_locus_tag=BDI4_120089 NZ_CAJZAS010000024.1 Protein Homology CDS 77509 77829 . + 0 ID=cds-WP_223960402.1;Parent=gene-LDO45_RS04480;Dbxref=GenBank:WP_223960402.1;Name=WP_223960402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483262.1;locus_tag=LDO45_RS04480;product=hypothetical protein;protein_id=WP_223960402.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 78333 79994 . + . ID=gene-LDO45_RS04485;Name=mqo;gbkey=Gene;gene=mqo;gene_biotype=protein_coding;locus_tag=LDO45_RS04485;old_locus_tag=BDI4_120090 NZ_CAJZAS010000024.1 Protein Homology CDS 78333 79994 . + 0 ID=cds-WP_223960251.1;Parent=gene-LDO45_RS04485;Dbxref=GenBank:WP_223960251.1;Name=WP_223960251.1;Ontology_term=GO:0006099,GO:0008924;gbkey=CDS;gene=mqo;go_function=L-malate dehydrogenase (quinone) activity|0008924||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356540.1;locus_tag=LDO45_RS04485;product=malate dehydrogenase (quinone);protein_id=WP_223960251.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 80335 80532 . + . ID=gene-LDO45_RS04490;Name=LDO45_RS04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04490;old_locus_tag=BDI4_120091 NZ_CAJZAS010000024.1 Protein Homology CDS 80335 80532 . + 0 ID=cds-WP_059447636.1;Parent=gene-LDO45_RS04490;Dbxref=GenBank:WP_059447636.1;Name=WP_059447636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483193.1;locus_tag=LDO45_RS04490;product=hypothetical protein;protein_id=WP_059447636.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 80534 81931 . + . ID=gene-LDO45_RS04495;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=LDO45_RS04495;old_locus_tag=BDI4_120092 NZ_CAJZAS010000024.1 Protein Homology CDS 80534 81931 . + 0 ID=cds-WP_059533646.1;Parent=gene-LDO45_RS04495;Dbxref=GenBank:WP_059533646.1;Name=WP_059533646.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548605.1;locus_tag=LDO45_RS04495;product=ATP-dependent RNA helicase DbpA;protein_id=WP_059533646.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 81961 82845 . - . ID=gene-LDO45_RS04500;Name=LDO45_RS04500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04500;old_locus_tag=BDI4_120093 NZ_CAJZAS010000024.1 Protein Homology CDS 81961 82845 . - 0 ID=cds-WP_223960253.1;Parent=gene-LDO45_RS04500;Dbxref=GenBank:WP_223960253.1;Name=WP_223960253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413929.1;locus_tag=LDO45_RS04500;product=LysR substrate-binding domain-containing protein;protein_id=WP_223960253.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 82967 83917 . + . ID=gene-LDO45_RS04505;Name=hndA;gbkey=Gene;gene=hndA;gene_biotype=protein_coding;locus_tag=LDO45_RS04505;old_locus_tag=BDI4_120094 NZ_CAJZAS010000024.1 Protein Homology CDS 82967 83917 . + 0 ID=cds-WP_223960255.1;Parent=gene-LDO45_RS04505;Dbxref=GenBank:WP_223960255.1;Name=WP_223960255.1;gbkey=CDS;gene=hndA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_088621905.1;locus_tag=LDO45_RS04505;product=2-hydroxy-1-naphthoic acid nonoxidative decarboxylase;protein_id=WP_223960255.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 84003 84905 . - . ID=gene-LDO45_RS04510;Name=LDO45_RS04510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04510;old_locus_tag=BDI4_120095 NZ_CAJZAS010000024.1 Protein Homology CDS 84003 84905 . - 0 ID=cds-WP_223960257.1;Parent=gene-LDO45_RS04510;Dbxref=GenBank:WP_223960257.1;Name=WP_223960257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356545.1;locus_tag=LDO45_RS04510;product=transporter;protein_id=WP_223960257.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 84974 85795 . - . ID=gene-LDO45_RS04515;Name=LDO45_RS04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04515;old_locus_tag=BDI4_120096 NZ_CAJZAS010000024.1 Protein Homology CDS 84974 85795 . - 0 ID=cds-WP_223960259.1;Parent=gene-LDO45_RS04515;Dbxref=GenBank:WP_223960259.1;Name=WP_223960259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413931.1;locus_tag=LDO45_RS04515;product=alpha/beta fold hydrolase;protein_id=WP_223960259.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 85833 86027 . - . ID=gene-LDO45_RS04520;Name=LDO45_RS04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04520;old_locus_tag=BDI4_120097 NZ_CAJZAS010000024.1 Protein Homology CDS 85833 86027 . - 0 ID=cds-WP_257129466.1;Parent=gene-LDO45_RS04520;Dbxref=GenBank:WP_257129466.1;Name=WP_257129466.1;Ontology_term=GO:0008152,GO:0016862;gbkey=CDS;go_function=intramolecular oxidoreductase activity%2C interconverting keto- and enol-groups|0016862||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017775866.1;locus_tag=LDO45_RS04520;product=2-hydroxymuconate tautomerase;protein_id=WP_257129466.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 86052 86840 . - . ID=gene-LDO45_RS04525;Name=dmpH;gbkey=Gene;gene=dmpH;gene_biotype=protein_coding;locus_tag=LDO45_RS04525;old_locus_tag=BDI4_120098 NZ_CAJZAS010000024.1 Protein Homology CDS 86052 86840 . - 0 ID=cds-WP_223960261.1;Parent=gene-LDO45_RS04525;Dbxref=GenBank:WP_223960261.1;Name=WP_223960261.1;Ontology_term=GO:0047437;gbkey=CDS;gene=dmpH;go_function=4-oxalocrotonate decarboxylase activity|0047437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397653.1;locus_tag=LDO45_RS04525;product=2-oxo-3-hexenedioate decarboxylase;protein_id=WP_223960261.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 86837 87883 . - . ID=gene-LDO45_RS04530;Name=dmpG;gbkey=Gene;gene=dmpG;gene_biotype=protein_coding;locus_tag=LDO45_RS04530;old_locus_tag=BDI4_120099 NZ_CAJZAS010000024.1 Protein Homology CDS 86837 87883 . - 0 ID=cds-WP_223960263.1;Parent=gene-LDO45_RS04530;Dbxref=GenBank:WP_223960263.1;Name=WP_223960263.1;Ontology_term=GO:0009056,GO:0008701;gbkey=CDS;gene=dmpG;go_function=4-hydroxy-2-oxovalerate aldolase activity|0008701||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875733.1;locus_tag=LDO45_RS04530;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_223960263.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 87928 88848 . - . ID=gene-LDO45_RS04535;Name=LDO45_RS04535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04535;old_locus_tag=BDI4_120100 NZ_CAJZAS010000024.1 Protein Homology CDS 87928 88848 . - 0 ID=cds-WP_059818364.1;Parent=gene-LDO45_RS04535;Dbxref=GenBank:WP_059818364.1;Name=WP_059818364.1;Ontology_term=GO:0009056,GO:0008774;gbkey=CDS;go_function=acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012430578.1;locus_tag=LDO45_RS04535;product=acetaldehyde dehydrogenase (acetylating);protein_id=WP_059818364.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 88890 89672 . - . ID=gene-LDO45_RS04540;Name=dmpE;gbkey=Gene;gene=dmpE;gene_biotype=protein_coding;locus_tag=LDO45_RS04540;old_locus_tag=BDI4_120101 NZ_CAJZAS010000024.1 Protein Homology CDS 88890 89672 . - 0 ID=cds-WP_223960265.1;Parent=gene-LDO45_RS04540;Dbxref=GenBank:WP_223960265.1;Name=WP_223960265.1;Ontology_term=GO:0008684;gbkey=CDS;gene=dmpE;go_function=2-oxopent-4-enoate hydratase activity|0008684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413996.1;locus_tag=LDO45_RS04540;product=2-oxopent-4-enoate hydratase;protein_id=WP_223960265.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 89701 91212 . - . ID=gene-LDO45_RS04545;Name=LDO45_RS04545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04545;old_locus_tag=BDI4_120102 NZ_CAJZAS010000024.1 Protein Homology CDS 89701 91212 . - 0 ID=cds-WP_223960267.1;Parent=gene-LDO45_RS04545;Dbxref=GenBank:WP_223960267.1;Name=WP_223960267.1;Ontology_term=GO:0016620;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397649.1;locus_tag=LDO45_RS04545;product=2-hydroxymuconic semialdehyde dehydrogenase;protein_id=WP_223960267.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 91275 91724 . - . ID=gene-LDO45_RS04550;Name=LDO45_RS04550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04550;old_locus_tag=BDI4_120103 NZ_CAJZAS010000024.1 Protein Homology CDS 91275 91724 . - 0 ID=cds-WP_223960269.1;Parent=gene-LDO45_RS04550;Dbxref=GenBank:WP_223960269.1;Name=WP_223960269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900544.1;locus_tag=LDO45_RS04550;product=heme-binding protein;protein_id=WP_223960269.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 91745 92689 . - . ID=gene-LDO45_RS04555;Name=LDO45_RS04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04555;old_locus_tag=BDI4_120104 NZ_CAJZAS010000024.1 Protein Homology CDS 91745 92689 . - 0 ID=cds-WP_223960271.1;Parent=gene-LDO45_RS04555;Dbxref=GenBank:WP_223960271.1;Name=WP_223960271.1;Ontology_term=GO:0009712,GO:0008198,GO:0018577;gbkey=CDS;go_function=ferrous iron binding|0008198||IEA,catechol 2%2C3-dioxygenase activity|0018577||IEA;go_process=catechol-containing compound metabolic process|0009712||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356554.1;locus_tag=LDO45_RS04555;product=catechol 2%2C3-dioxygenase;protein_id=WP_223960271.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 92715 93071 . - . ID=gene-LDO45_RS04560;Name=LDO45_RS04560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04560;old_locus_tag=BDI4_120105 NZ_CAJZAS010000024.1 Protein Homology CDS 92715 93071 . - 0 ID=cds-WP_223960273.1;Parent=gene-LDO45_RS04560;Dbxref=GenBank:WP_223960273.1;Name=WP_223960273.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900546.1;locus_tag=LDO45_RS04560;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_223960273.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 93073 94137 . - . ID=gene-LDO45_RS04565;Name=LDO45_RS04565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04565;old_locus_tag=BDI4_120106 NZ_CAJZAS010000024.1 Protein Homology CDS 93073 94137 . - 0 ID=cds-WP_223960274.1;Parent=gene-LDO45_RS04565;Dbxref=GenBank:WP_223960274.1;Name=WP_223960274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397645.1;locus_tag=LDO45_RS04565;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;protein_id=WP_223960274.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 94163 94519 . - . ID=gene-LDO45_RS04570;Name=LDO45_RS04570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04570;old_locus_tag=BDI4_120107 NZ_CAJZAS010000024.1 Protein Homology CDS 94163 94519 . - 0 ID=cds-WP_059818385.1;Parent=gene-LDO45_RS04570;Dbxref=GenBank:WP_059818385.1;Name=WP_059818385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356557.1;locus_tag=LDO45_RS04570;product=phenol hydroxylase subunit P4;protein_id=WP_059818385.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 94594 96144 . - . ID=gene-LDO45_RS04575;Name=LDO45_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04575;old_locus_tag=BDI4_120108 NZ_CAJZAS010000024.1 Protein Homology CDS 94594 96144 . - 0 ID=cds-WP_059818358.1;Parent=gene-LDO45_RS04575;Dbxref=GenBank:WP_059818358.1;Name=WP_059818358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397643.1;locus_tag=LDO45_RS04575;product=aromatic/alkene/methane monooxygenase hydroxylase/oxygenase subunit alpha;protein_id=WP_059818358.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 96183 96452 . - . ID=gene-LDO45_RS04580;Name=LDO45_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04580;old_locus_tag=BDI4_120109 NZ_CAJZAS010000024.1 Protein Homology CDS 96183 96452 . - 0 ID=cds-WP_059692562.1;Parent=gene-LDO45_RS04580;Dbxref=GenBank:WP_059692562.1;Name=WP_059692562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900550.1;locus_tag=LDO45_RS04580;product=MmoB/DmpM family protein;protein_id=WP_059692562.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 96489 97484 . - . ID=gene-LDO45_RS04585;Name=LDO45_RS04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04585;old_locus_tag=BDI4_120110 NZ_CAJZAS010000024.1 Protein Homology CDS 96489 97484 . - 0 ID=cds-WP_223960276.1;Parent=gene-LDO45_RS04585;Dbxref=GenBank:WP_223960276.1;Name=WP_223960276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011516096.1;locus_tag=LDO45_RS04585;product=phenol hydroxylase;protein_id=WP_223960276.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 97501 97875 . - . ID=gene-LDO45_RS04590;Name=LDO45_RS04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04590 NZ_CAJZAS010000024.1 Protein Homology CDS 97501 97875 . - 0 ID=cds-WP_223960278.1;Parent=gene-LDO45_RS04590;Dbxref=GenBank:WP_223960278.1;Name=WP_223960278.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017872.5;locus_tag=LDO45_RS04590;product=phenol hydroxylase subunit;protein_id=WP_223960278.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 98018 99706 . + . ID=gene-LDO45_RS04595;Name=LDO45_RS04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04595;old_locus_tag=BDI4_120112 NZ_CAJZAS010000024.1 Protein Homology CDS 98018 99706 . + 0 ID=cds-WP_223960280.1;Parent=gene-LDO45_RS04595;Dbxref=GenBank:WP_223960280.1;Name=WP_223960280.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397639.1;locus_tag=LDO45_RS04595;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_223960280.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 99708 100451 . + . ID=gene-LDO45_RS04600;Name=LDO45_RS04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04600;old_locus_tag=BDI4_120113 NZ_CAJZAS010000024.1 Protein Homology CDS 99708 100451 . + 0 ID=cds-WP_223960282.1;Parent=gene-LDO45_RS04600;Dbxref=GenBank:WP_223960282.1;Name=WP_223960282.1;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356563.1;locus_tag=LDO45_RS04600;product=GntR family transcriptional regulator;protein_id=WP_223960282.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 100474 101298 . - . ID=gene-LDO45_RS04605;Name=LDO45_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04605;old_locus_tag=BDI4_120114 NZ_CAJZAS010000024.1 Protein Homology CDS 100474 101298 . - 0 ID=cds-WP_223960284.1;Parent=gene-LDO45_RS04605;Dbxref=GenBank:WP_223960284.1;Name=WP_223960284.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660029.1;locus_tag=LDO45_RS04605;product=phosphate/phosphite/phosphonate ABC transporter substrate-binding protein;protein_id=WP_223960284.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 101618 102643 . + . ID=gene-LDO45_RS04610;Name=LDO45_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04610;old_locus_tag=BDI4_120115 NZ_CAJZAS010000024.1 Protein Homology CDS 101618 102643 . + 0 ID=cds-WP_223960286.1;Parent=gene-LDO45_RS04610;Dbxref=GenBank:WP_223960286.1;Name=WP_223960286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356565.1;locus_tag=LDO45_RS04610;product=fatty acid desaturase;protein_id=WP_223960286.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 102873 104081 . + . ID=gene-LDO45_RS04615;Name=LDO45_RS04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04615;old_locus_tag=BDI4_120116 NZ_CAJZAS010000024.1 Protein Homology CDS 102873 104081 . + 0 ID=cds-WP_223960288.1;Parent=gene-LDO45_RS04615;Dbxref=GenBank:WP_223960288.1;Name=WP_223960288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900558.1;locus_tag=LDO45_RS04615;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_223960288.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 104155 105372 . - . ID=gene-LDO45_RS04620;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=LDO45_RS04620;old_locus_tag=BDI4_120117 NZ_CAJZAS010000024.1 Protein Homology CDS 104155 105372 . - 0 ID=cds-WP_223960291.1;Parent=gene-LDO45_RS04620;Dbxref=GenBank:WP_223960291.1;Name=WP_223960291.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700166.1;locus_tag=LDO45_RS04620;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_223960291.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 105392 109483 . - . ID=gene-LDO45_RS04625;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=LDO45_RS04625;old_locus_tag=BDI4_120118 NZ_CAJZAS010000024.1 Protein Homology CDS 105392 109483 . - 0 ID=cds-WP_223960293.1;Parent=gene-LDO45_RS04625;Dbxref=GenBank:WP_223960293.1;Name=WP_223960293.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssM;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750159.1;locus_tag=LDO45_RS04625;product=type VI secretion system membrane subunit TssM;protein_id=WP_223960293.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 109509 110825 . - . ID=gene-LDO45_RS04630;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=LDO45_RS04630;old_locus_tag=BDI4_120119 NZ_CAJZAS010000024.1 Protein Homology CDS 109509 110825 . - 0 ID=cds-WP_223960295.1;Parent=gene-LDO45_RS04630;Dbxref=GenBank:WP_223960295.1;Name=WP_223960295.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssL;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553104.1;locus_tag=LDO45_RS04630;product=type VI secretion system protein TssL%2C long form;protein_id=WP_223960295.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 110829 111110 . - . ID=gene-LDO45_RS04635;Name=LDO45_RS04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04635;old_locus_tag=BDI4_120120 NZ_CAJZAS010000024.1 Protein Homology CDS 110829 111110 . - 0 ID=cds-WP_223960297.1;Parent=gene-LDO45_RS04635;Dbxref=GenBank:WP_223960297.1;Name=WP_223960297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875666.1;locus_tag=LDO45_RS04635;product=PAAR domain-containing protein;protein_id=WP_223960297.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 111125 112003 . - . ID=gene-LDO45_RS04640;Name=LDO45_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04640;old_locus_tag=BDI4_120121 NZ_CAJZAS010000024.1 Protein Homology CDS 111125 112003 . - 0 ID=cds-WP_223960299.1;Parent=gene-LDO45_RS04640;Dbxref=GenBank:WP_223960299.1;Name=WP_223960299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012431523.1;locus_tag=LDO45_RS04640;product=DUF4123 domain-containing protein;protein_id=WP_223960299.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 112072 114384 . - . ID=gene-LDO45_RS04645;Name=LDO45_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04645;old_locus_tag=BDI4_120122 NZ_CAJZAS010000024.1 Protein Homology CDS 112072 114384 . - 0 ID=cds-WP_223960301.1;Parent=gene-LDO45_RS04645;Dbxref=GenBank:WP_223960301.1;Name=WP_223960301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396714.1;locus_tag=LDO45_RS04645;product=DUF2235 domain-containing protein;protein_id=WP_223960301.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 114339 114941 . - . ID=gene-LDO45_RS04650;Name=LDO45_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04650;old_locus_tag=BDI4_120123 NZ_CAJZAS010000024.1 Protein Homology CDS 114339 114941 . - 0 ID=cds-WP_223960303.1;Parent=gene-LDO45_RS04650;Dbxref=GenBank:WP_223960303.1;Name=WP_223960303.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012431518.1;locus_tag=LDO45_RS04650;product=DUF3304 domain-containing protein;protein_id=WP_223960303.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 115338 117860 . - . ID=gene-LDO45_RS04655;Name=LDO45_RS04655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04655;old_locus_tag=BDI4_120125 NZ_CAJZAS010000024.1 Protein Homology CDS 115338 117860 . - 0 ID=cds-WP_223960305.1;Parent=gene-LDO45_RS04655;Dbxref=GenBank:WP_223960305.1;Name=WP_223960305.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403140.1;locus_tag=LDO45_RS04655;product=type VI secretion system Vgr family protein;protein_id=WP_223960305.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 117933 119279 . - . ID=gene-LDO45_RS04660;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=LDO45_RS04660;old_locus_tag=BDI4_120126 NZ_CAJZAS010000024.1 Protein Homology CDS 117933 119279 . - 0 ID=cds-WP_223960307.1;Parent=gene-LDO45_RS04660;Dbxref=GenBank:WP_223960307.1;Name=WP_223960307.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410794.1;locus_tag=LDO45_RS04660;product=type VI secretion system baseplate subunit TssK;protein_id=WP_223960307.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 119413 119745 . - . ID=gene-LDO45_RS04665;Name=LDO45_RS04665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04665;old_locus_tag=BDI4_120127 NZ_CAJZAS010000024.1 Protein Homology CDS 119413 119745 . - 0 ID=cds-WP_059692579.1;Parent=gene-LDO45_RS04665;Dbxref=GenBank:WP_059692579.1;Name=WP_059692579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091857.1;locus_tag=LDO45_RS04665;product=DUF6693 family protein;protein_id=WP_059692579.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 119750 120256 . - . ID=gene-LDO45_RS04670;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=LDO45_RS04670;old_locus_tag=BDI4_120128 NZ_CAJZAS010000024.1 Protein Homology CDS 119750 120256 . - 0 ID=cds-WP_059692580.1;Parent=gene-LDO45_RS04670;Dbxref=GenBank:WP_059692580.1;Name=WP_059692580.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354590.1;locus_tag=LDO45_RS04670;product=type VI secretion system lipoprotein TssJ;protein_id=WP_059692580.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 120337 120822 . - . ID=gene-LDO45_RS04675;Name=LDO45_RS04675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04675;old_locus_tag=BDI4_120129 NZ_CAJZAS010000024.1 Protein Homology CDS 120337 120822 . - 0 ID=cds-WP_059447502.1;Parent=gene-LDO45_RS04675;Dbxref=GenBank:WP_059447502.1;Name=WP_059447502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188308.1;locus_tag=LDO45_RS04675;product=type VI secretion system tube protein Hcp;protein_id=WP_059447502.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 120919 122412 . - . ID=gene-LDO45_RS04680;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=LDO45_RS04680;old_locus_tag=BDI4_120130 NZ_CAJZAS010000024.1 Protein Homology CDS 120919 122412 . - 0 ID=cds-WP_059447501.1;Parent=gene-LDO45_RS04680;Dbxref=GenBank:WP_059447501.1;Name=WP_059447501.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007181815.1;locus_tag=LDO45_RS04680;product=type VI secretion system contractile sheath large subunit;protein_id=WP_059447501.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 122440 122982 . - . ID=gene-LDO45_RS04685;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=LDO45_RS04685;old_locus_tag=BDI4_120131 NZ_CAJZAS010000024.1 Protein Homology CDS 122440 122982 . - 0 ID=cds-WP_059447500.1;Parent=gene-LDO45_RS04685;Dbxref=GenBank:WP_059447500.1;Name=WP_059447500.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412743.1;locus_tag=LDO45_RS04685;product=type VI secretion system contractile sheath small subunit;protein_id=WP_059447500.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 123020 125701 . - . ID=gene-LDO45_RS04690;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=LDO45_RS04690;old_locus_tag=BDI4_120132 NZ_CAJZAS010000024.1 Protein Homology CDS 123020 125701 . - 0 ID=cds-WP_223960309.1;Parent=gene-LDO45_RS04690;Dbxref=GenBank:WP_223960309.1;Name=WP_223960309.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700174.1;locus_tag=LDO45_RS04690;product=type VI secretion system ATPase TssH;protein_id=WP_223960309.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 126238 126897 . + . ID=gene-LDO45_RS04695;Name=LDO45_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04695;old_locus_tag=BDI4_120134 NZ_CAJZAS010000024.1 Protein Homology CDS 126238 126897 . + 0 ID=cds-WP_223960311.1;Parent=gene-LDO45_RS04695;Dbxref=GenBank:WP_223960311.1;Name=WP_223960311.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033419.1;locus_tag=LDO45_RS04695;product=TagK domain-containing protein;protein_id=WP_223960311.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 126894 127745 . + . ID=gene-LDO45_RS04700;Name=LDO45_RS04700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04700;old_locus_tag=BDI4_120135 NZ_CAJZAS010000024.1 Protein Homology CDS 126894 127745 . + 0 ID=cds-WP_223960313.1;Parent=gene-LDO45_RS04700;Dbxref=GenBank:WP_223960313.1;Name=WP_223960313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700176.1;locus_tag=LDO45_RS04700;product=type VI secretion system accessory protein TagJ;protein_id=WP_223960313.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 127738 128298 . + . ID=gene-LDO45_RS04705;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=LDO45_RS04705;old_locus_tag=BDI4_120136 NZ_CAJZAS010000024.1 Protein Homology CDS 127738 128298 . + 0 ID=cds-WP_059692586.1;Parent=gene-LDO45_RS04705;Dbxref=GenBank:WP_059692586.1;Name=WP_059692586.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216745.1;locus_tag=LDO45_RS04705;product=type VI secretion system baseplate subunit TssE;protein_id=WP_059692586.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 128334 130223 . + . ID=gene-LDO45_RS04710;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LDO45_RS04710;old_locus_tag=BDI4_120137 NZ_CAJZAS010000024.1 Protein Homology CDS 128334 130223 . + 0 ID=cds-WP_223960404.1;Parent=gene-LDO45_RS04710;Dbxref=GenBank:WP_223960404.1;Name=WP_223960404.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700178.1;locus_tag=LDO45_RS04710;product=type VI secretion system baseplate subunit TssF;protein_id=WP_223960404.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 130223 131299 . + . ID=gene-LDO45_RS04715;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=LDO45_RS04715;old_locus_tag=BDI4_120138 NZ_CAJZAS010000024.1 Protein Homology CDS 130223 131299 . + 0 ID=cds-WP_223960315.1;Parent=gene-LDO45_RS04715;Dbxref=GenBank:WP_223960315.1;Name=WP_223960315.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750141.1;locus_tag=LDO45_RS04715;product=type VI secretion system baseplate subunit TssG;protein_id=WP_223960315.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 131296 132417 . + . ID=gene-LDO45_RS04720;Name=LDO45_RS04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04720;old_locus_tag=BDI4_120139 NZ_CAJZAS010000024.1 Protein Homology CDS 131296 132417 . + 0 ID=cds-WP_223960317.1;Parent=gene-LDO45_RS04720;Dbxref=GenBank:WP_223960317.1;Name=WP_223960317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412757.1;locus_tag=LDO45_RS04720;product=ImpA family type VI secretion system protein;protein_id=WP_223960317.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 132442 133335 . - . ID=gene-LDO45_RS04725;Name=LDO45_RS04725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04725;old_locus_tag=BDI4_120140 NZ_CAJZAS010000024.1 Protein Homology CDS 132442 133335 . - 0 ID=cds-WP_223960320.1;Parent=gene-LDO45_RS04725;Dbxref=GenBank:WP_223960320.1;Name=WP_223960320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548610.1;locus_tag=LDO45_RS04725;product=NAD(P)H-binding protein;protein_id=WP_223960320.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 133478 134401 . - . ID=gene-LDO45_RS04730;Name=LDO45_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04730;old_locus_tag=BDI4_120141 NZ_CAJZAS010000024.1 Protein Homology CDS 133478 134401 . - 0 ID=cds-WP_059698739.1;Parent=gene-LDO45_RS04730;Dbxref=GenBank:WP_059698739.1;Name=WP_059698739.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494518.1;locus_tag=LDO45_RS04730;product=AraC family transcriptional regulator;protein_id=WP_059698739.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 134595 134792 . + . ID=gene-LDO45_RS04735;Name=LDO45_RS04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04735;old_locus_tag=BDI4_120142 NZ_CAJZAS010000024.1 Protein Homology CDS 134595 134792 . + 0 ID=cds-WP_223960321.1;Parent=gene-LDO45_RS04735;Dbxref=GenBank:WP_223960321.1;Name=WP_223960321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756250.1;locus_tag=LDO45_RS04735;product=hypothetical protein;protein_id=WP_223960321.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 134841 135794 . - . ID=gene-LDO45_RS04740;Name=LDO45_RS04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04740;old_locus_tag=BDI4_120143 NZ_CAJZAS010000024.1 Protein Homology CDS 134841 135794 . - 0 ID=cds-WP_223960323.1;Parent=gene-LDO45_RS04740;Dbxref=GenBank:WP_223960323.1;Name=WP_223960323.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356572.1;locus_tag=LDO45_RS04740;product=LysR family transcriptional regulator;protein_id=WP_223960323.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 135895 137253 . + . ID=gene-LDO45_RS04745;Name=LDO45_RS04745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04745;old_locus_tag=BDI4_120144 NZ_CAJZAS010000024.1 Protein Homology CDS 135895 137253 . + 0 ID=cds-WP_223960325.1;Parent=gene-LDO45_RS04745;Dbxref=GenBank:WP_223960325.1;Name=WP_223960325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365154.1;locus_tag=LDO45_RS04745;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_223960325.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 137578 138012 . + . ID=gene-LDO45_RS04750;Name=LDO45_RS04750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04750;old_locus_tag=BDI4_120146 NZ_CAJZAS010000024.1 Protein Homology CDS 137578 138012 . + 0 ID=cds-WP_223960327.1;Parent=gene-LDO45_RS04750;Dbxref=GenBank:WP_223960327.1;Name=WP_223960327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756252.1;locus_tag=LDO45_RS04750;product=phosphatase;protein_id=WP_223960327.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 138187 138438 . - . ID=gene-LDO45_RS04755;Name=LDO45_RS04755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04755;old_locus_tag=BDI4_120147 NZ_CAJZAS010000024.1 Protein Homology CDS 138187 138438 . - 0 ID=cds-WP_059447486.1;Parent=gene-LDO45_RS04755;Dbxref=GenBank:WP_059447486.1;Name=WP_059447486.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF015506.5;locus_tag=LDO45_RS04755;product=energy transducer TonB;protein_id=WP_059447486.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 138480 138761 . - . ID=gene-LDO45_RS04760;Name=LDO45_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04760 NZ_CAJZAS010000024.1 Protein Homology CDS 138480 138761 . - 0 ID=cds-WP_223960329.1;Parent=gene-LDO45_RS04760;Dbxref=GenBank:WP_223960329.1;Name=WP_223960329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749332.1;locus_tag=LDO45_RS04760;product=transcriptional regulator;protein_id=WP_223960329.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 139133 139444 . + . ID=gene-LDO45_RS04765;Name=LDO45_RS04765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04765;old_locus_tag=BDI4_120149 NZ_CAJZAS010000024.1 Protein Homology CDS 139133 139444 . + 0 ID=cds-WP_223960331.1;Parent=gene-LDO45_RS04765;Dbxref=GenBank:WP_223960331.1;Name=WP_223960331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494523.1;locus_tag=LDO45_RS04765;product=hypothetical protein;protein_id=WP_223960331.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 139798 141444 . + . ID=gene-LDO45_RS04770;Name=LDO45_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04770;old_locus_tag=BDI4_120151 NZ_CAJZAS010000024.1 Protein Homology CDS 139798 141444 . + 0 ID=cds-WP_223960333.1;Parent=gene-LDO45_RS04770;Dbxref=GenBank:WP_223960333.1;Name=WP_223960333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660019.1;locus_tag=LDO45_RS04770;product=EAL domain-containing protein;protein_id=WP_223960333.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 141642 144008 . + . ID=gene-LDO45_RS04775;Name=LDO45_RS04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04775;old_locus_tag=BDI4_120152 NZ_CAJZAS010000024.1 Protein Homology CDS 141642 144008 . + 0 ID=cds-WP_223960335.1;Parent=gene-LDO45_RS04775;Dbxref=GenBank:WP_223960335.1;Name=WP_223960335.1;Ontology_term=GO:0000166,GO:0003676,GO:0003887;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleic acid binding|0003676||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365147.1;locus_tag=LDO45_RS04775;product=DNA polymerase II;protein_id=WP_223960335.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 144125 145258 . + . ID=gene-LDO45_RS04780;Name=LDO45_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04780;old_locus_tag=BDI4_120153 NZ_CAJZAS010000024.1 Protein Homology CDS 144125 145258 . + 0 ID=cds-WP_223960337.1;Parent=gene-LDO45_RS04780;Dbxref=GenBank:WP_223960337.1;Name=WP_223960337.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493657.1;locus_tag=LDO45_RS04780;product=J domain-containing protein;protein_id=WP_223960337.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 145302 146207 . - . ID=gene-LDO45_RS04785;Name=LDO45_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04785;old_locus_tag=BDI4_120154 NZ_CAJZAS010000024.1 Protein Homology CDS 145302 146207 . - 0 ID=cds-WP_223960339.1;Parent=gene-LDO45_RS04785;Dbxref=GenBank:WP_223960339.1;Name=WP_223960339.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881221.1;locus_tag=LDO45_RS04785;product=LysR family transcriptional regulator;protein_id=WP_223960339.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 146287 147531 . - . ID=gene-LDO45_RS04790;Name=LDO45_RS04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04790;old_locus_tag=BDI4_120155 NZ_CAJZAS010000024.1 Protein Homology CDS 146287 147531 . - 0 ID=cds-WP_223960341.1;Parent=gene-LDO45_RS04790;Dbxref=GenBank:WP_223960341.1;Name=WP_223960341.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404545.1;locus_tag=LDO45_RS04790;product=acyl-CoA dehydrogenase family protein;protein_id=WP_223960341.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 147571 148329 . - . ID=gene-LDO45_RS04795;Name=LDO45_RS04795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04795;old_locus_tag=BDI4_120156 NZ_CAJZAS010000024.1 Protein Homology CDS 147571 148329 . - 0 ID=cds-WP_223960344.1;Parent=gene-LDO45_RS04795;Dbxref=GenBank:WP_223960344.1;Name=WP_223960344.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756262.1;locus_tag=LDO45_RS04795;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_223960344.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 148337 149101 . - . ID=gene-LDO45_RS04800;Name=LDO45_RS04800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04800 NZ_CAJZAS010000024.1 Protein Homology CDS 148337 149101 . - 0 ID=cds-WP_223960406.1;Parent=gene-LDO45_RS04800;Dbxref=GenBank:WP_223960406.1;Name=WP_223960406.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014206877.1;locus_tag=LDO45_RS04800;product=SDR family oxidoreductase;protein_id=WP_223960406.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq pseudogene 149153 150181 . - . ID=gene-LDO45_RS04805;Name=LDO45_RS04805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS04805;partial=true;pseudo=true;start_range=.,149153 NZ_CAJZAS010000024.1 Protein Homology CDS 149153 150181 . - 0 ID=cds-LDO45_RS04805;Parent=gene-LDO45_RS04805;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094974.1;locus_tag=LDO45_RS04805;partial=true;product=phosphotransferase;pseudo=true;start_range=.,149153;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 150202 150876 . - . ID=gene-LDO45_RS04810;Name=LDO45_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04810;old_locus_tag=BDI4_120158 NZ_CAJZAS010000024.1 Protein Homology CDS 150202 150876 . - 0 ID=cds-WP_223960346.1;Parent=gene-LDO45_RS04810;Dbxref=GenBank:WP_223960346.1;Name=WP_223960346.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881217.1;locus_tag=LDO45_RS04810;product=histidine phosphatase family protein;protein_id=WP_223960346.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 151083 151238 . + . ID=gene-LDO45_RS04815;Name=LDO45_RS04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04815;old_locus_tag=BDI4_120160 NZ_CAJZAS010000024.1 Protein Homology CDS 151083 151238 . + 0 ID=cds-WP_082721856.1;Parent=gene-LDO45_RS04815;Dbxref=GenBank:WP_082721856.1;Name=WP_082721856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397610.1;locus_tag=LDO45_RS04815;product=DUF3309 family protein;protein_id=WP_082721856.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 151609 154494 . - . ID=gene-LDO45_RS04820;Name=LDO45_RS04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04820;old_locus_tag=BDI4_120161 NZ_CAJZAS010000024.1 Protein Homology CDS 151609 154494 . - 0 ID=cds-WP_374109510.1;Parent=gene-LDO45_RS04820;Dbxref=GenBank:WP_374109510.1;Name=WP_374109510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659996.1;locus_tag=LDO45_RS04820;product=beta-propeller fold lactonase family protein;protein_id=WP_374109510.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 154764 156698 . - . ID=gene-LDO45_RS04825;Name=LDO45_RS04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04825;old_locus_tag=BDI4_120163 NZ_CAJZAS010000024.1 Protein Homology CDS 154764 156698 . - 0 ID=cds-WP_223960350.1;Parent=gene-LDO45_RS04825;Dbxref=GenBank:WP_223960350.1;Name=WP_223960350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482280.1;locus_tag=LDO45_RS04825;product=SMP-30/gluconolaconase/LRE-like region family protein;protein_id=WP_223960350.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 157157 158455 . - . ID=gene-LDO45_RS04830;Name=LDO45_RS04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04830;old_locus_tag=BDI4_120164 NZ_CAJZAS010000024.1 Protein Homology CDS 157157 158455 . - 0 ID=cds-WP_223960352.1;Parent=gene-LDO45_RS04830;Dbxref=GenBank:WP_223960352.1;Name=WP_223960352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090772.1;locus_tag=LDO45_RS04830;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_223960352.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 158799 160004 . - . ID=gene-LDO45_RS04835;Name=LDO45_RS04835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04835;old_locus_tag=BDI4_120165 NZ_CAJZAS010000024.1 Protein Homology CDS 158799 160004 . - 0 ID=cds-WP_223960354.1;Parent=gene-LDO45_RS04835;Dbxref=GenBank:WP_223960354.1;Name=WP_223960354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659992.1;locus_tag=LDO45_RS04835;product=MFS transporter;protein_id=WP_223960354.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 160015 160200 . - . ID=gene-LDO45_RS04840;Name=LDO45_RS04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04840 NZ_CAJZAS010000024.1 Protein Homology CDS 160015 160200 . - 0 ID=cds-WP_059508013.1;Parent=gene-LDO45_RS04840;Dbxref=GenBank:WP_059508013.1;Name=WP_059508013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479855.1;locus_tag=LDO45_RS04840;product=DUF1289 domain-containing protein;protein_id=WP_059508013.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 160203 161489 . - . ID=gene-LDO45_RS04845;Name=dmeF;gbkey=Gene;gene=dmeF;gene_biotype=protein_coding;locus_tag=LDO45_RS04845;old_locus_tag=BDI4_120166 NZ_CAJZAS010000024.1 Protein Homology CDS 160203 161489 . - 0 ID=cds-WP_223960356.1;Parent=gene-LDO45_RS04845;Dbxref=GenBank:WP_223960356.1;Name=WP_223960356.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;gene=dmeF;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659989.1;locus_tag=LDO45_RS04845;product=CDF family Co(II)/Ni(II) efflux transporter DmeF;protein_id=WP_223960356.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 161501 161773 . - . ID=gene-LDO45_RS04850;Name=LDO45_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04850;old_locus_tag=BDI4_120167 NZ_CAJZAS010000024.1 Protein Homology CDS 161501 161773 . - 0 ID=cds-WP_223960358.1;Parent=gene-LDO45_RS04850;Dbxref=GenBank:WP_223960358.1;Name=WP_223960358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548394.1;locus_tag=LDO45_RS04850;product=metal/formaldehyde-sensitive transcriptional repressor;protein_id=WP_223960358.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 161935 162912 . + . ID=gene-LDO45_RS04855;Name=LDO45_RS04855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04855;old_locus_tag=BDI4_120168 NZ_CAJZAS010000024.1 Protein Homology CDS 161935 162912 . + 0 ID=cds-WP_223960360.1;Parent=gene-LDO45_RS04855;Dbxref=GenBank:WP_223960360.1;Name=WP_223960360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004539585.1;locus_tag=LDO45_RS04855;product=chromate resistance protein ChrB domain-containing protein;protein_id=WP_223960360.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 162909 164087 . + . ID=gene-LDO45_RS04860;Name=LDO45_RS04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04860;old_locus_tag=BDI4_120169 NZ_CAJZAS010000024.1 Protein Homology CDS 162909 164087 . + 0 ID=cds-WP_223960362.1;Parent=gene-LDO45_RS04860;Dbxref=GenBank:WP_223960362.1;Name=WP_223960362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659986.1;locus_tag=LDO45_RS04860;product=chromate transporter;protein_id=WP_223960362.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 164262 165422 . + . ID=gene-LDO45_RS04865;Name=LDO45_RS04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04865;old_locus_tag=BDI4_120170 NZ_CAJZAS010000024.1 Protein Homology CDS 164262 165422 . + 0 ID=cds-WP_223960408.1;Parent=gene-LDO45_RS04865;Dbxref=GenBank:WP_223960408.1;Name=WP_223960408.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900642.1;locus_tag=LDO45_RS04865;product=MFS transporter;protein_id=WP_223960408.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 165521 166576 . + . ID=gene-LDO45_RS04870;Name=LDO45_RS04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04870;old_locus_tag=BDI4_120171 NZ_CAJZAS010000024.1 Protein Homology CDS 165521 166576 . + 0 ID=cds-WP_223960364.1;Parent=gene-LDO45_RS04870;Dbxref=GenBank:WP_223960364.1;Name=WP_223960364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900643.1;locus_tag=LDO45_RS04870;product=YncE family protein;protein_id=WP_223960364.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 166787 167404 . + . ID=gene-LDO45_RS04875;Name=LDO45_RS04875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04875;old_locus_tag=BDI4_120172 NZ_CAJZAS010000024.1 Protein Homology CDS 166787 167404 . + 0 ID=cds-WP_059698690.1;Parent=gene-LDO45_RS04875;Dbxref=GenBank:WP_059698690.1;Name=WP_059698690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480126.1;locus_tag=LDO45_RS04875;product=LysE family translocator;protein_id=WP_059698690.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 167515 167763 . + . ID=gene-LDO45_RS04880;Name=LDO45_RS04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04880;old_locus_tag=BDI4_120173 NZ_CAJZAS010000024.1 Protein Homology CDS 167515 167763 . + 0 ID=cds-WP_059533587.1;Parent=gene-LDO45_RS04880;Dbxref=GenBank:WP_059533587.1;Name=WP_059533587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749284.1;locus_tag=LDO45_RS04880;product=hypothetical protein;protein_id=WP_059533587.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq pseudogene 167887 169117 . - . ID=gene-LDO45_RS04885;Name=LDO45_RS04885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS04885;old_locus_tag=BDI4_120174;pseudo=true NZ_CAJZAS010000024.1 Protein Homology CDS 167887 169117 . - 0 ID=cds-LDO45_RS04885;Parent=gene-LDO45_RS04885;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756642.1;locus_tag=LDO45_RS04885;product=MFS transporter;pseudo=true;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 169267 169653 . - . ID=gene-LDO45_RS04890;Name=pcaC;gbkey=Gene;gene=pcaC;gene_biotype=protein_coding;locus_tag=LDO45_RS04890;old_locus_tag=BDI4_120175 NZ_CAJZAS010000024.1 Protein Homology CDS 169267 169653 . - 0 ID=cds-WP_059692656.1;Parent=gene-LDO45_RS04890;Dbxref=GenBank:WP_059692656.1;Name=WP_059692656.1;Ontology_term=GO:0047575;gbkey=CDS;gene=pcaC;go_function=4-carboxymuconolactone decarboxylase activity|0047575||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480129.1;locus_tag=LDO45_RS04890;product=4-carboxymuconolactone decarboxylase;protein_id=WP_059692656.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 169664 170449 . - . ID=gene-LDO45_RS04895;Name=pcaD;gbkey=Gene;gene=pcaD;gene_biotype=protein_coding;locus_tag=LDO45_RS04895;old_locus_tag=BDI4_120176 NZ_CAJZAS010000024.1 Protein Homology CDS 169664 170449 . - 0 ID=cds-WP_059533583.1;Parent=gene-LDO45_RS04895;Dbxref=GenBank:WP_059533583.1;Name=WP_059533583.1;Ontology_term=GO:0042952,GO:0047570;gbkey=CDS;gene=pcaD;go_function=3-oxoadipate enol-lactonase activity|0047570||IEA;go_process=beta-ketoadipate pathway|0042952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010117629.1;locus_tag=LDO45_RS04895;product=3-oxoadipate enol-lactonase;protein_id=WP_059533583.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 170449 171822 . - . ID=gene-LDO45_RS04900;Name=LDO45_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04900;old_locus_tag=BDI4_120177 NZ_CAJZAS010000024.1 Protein Homology CDS 170449 171822 . - 0 ID=cds-WP_223960366.1;Parent=gene-LDO45_RS04900;Dbxref=GenBank:WP_223960366.1;Name=WP_223960366.1;Ontology_term=GO:0019619,GO:0047472;gbkey=CDS;go_function=3-carboxy-cis%2Ccis-muconate cycloisomerase activity|0047472||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900664.1;locus_tag=LDO45_RS04900;product=3-carboxy-cis%2Ccis-muconate cycloisomerase;protein_id=WP_223960366.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 171911 172567 . - . ID=gene-LDO45_RS04905;Name=LDO45_RS04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04905;old_locus_tag=BDI4_120179 NZ_CAJZAS010000024.1 Protein Homology CDS 171911 172567 . - 0 ID=cds-WP_012365076.1;Parent=gene-LDO45_RS04905;Dbxref=GenBank:WP_012365076.1;Name=WP_012365076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194517.1;locus_tag=LDO45_RS04905;product=CoA transferase subunit B;protein_id=WP_012365076.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 172586 173299 . - . ID=gene-LDO45_RS04910;Name=LDO45_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04910;old_locus_tag=BDI4_120180 NZ_CAJZAS010000024.1 Protein Homology CDS 172586 173299 . - 0 ID=cds-WP_014900666.1;Parent=gene-LDO45_RS04910;Dbxref=GenBank:WP_014900666.1;Name=WP_014900666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009945766.1;locus_tag=LDO45_RS04910;product=3-oxoacid CoA-transferase subunit A;protein_id=WP_014900666.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 173445 174677 . - . ID=gene-LDO45_RS04915;Name=pobA;gbkey=Gene;gene=pobA;gene_biotype=protein_coding;locus_tag=LDO45_RS04915;old_locus_tag=BDI4_120181 NZ_CAJZAS010000024.1 Protein Homology CDS 173445 174677 . - 0 ID=cds-WP_223960368.1;Parent=gene-LDO45_RS04915;Dbxref=GenBank:WP_223960368.1;Name=WP_223960368.1;Ontology_term=GO:0043639,GO:0018659,GO:0050660;gbkey=CDS;gene=pobA;go_function=4-hydroxybenzoate 3-monooxygenase activity|0018659||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=benzoate catabolic process|0043639||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766752.1;locus_tag=LDO45_RS04915;product=4-hydroxybenzoate 3-monooxygenase;protein_id=WP_223960368.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 174794 175720 . + . ID=gene-LDO45_RS04920;Name=LDO45_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04920;old_locus_tag=BDI4_120183 NZ_CAJZAS010000024.1 Protein Homology CDS 174794 175720 . + 0 ID=cds-WP_059692669.1;Parent=gene-LDO45_RS04920;Dbxref=GenBank:WP_059692669.1;Name=WP_059692669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532449.1;locus_tag=LDO45_RS04920;product=LysR family transcriptional regulator;protein_id=WP_059692669.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 175822 176451 . + . ID=gene-LDO45_RS04925;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=LDO45_RS04925;old_locus_tag=BDI4_120184 NZ_CAJZAS010000024.1 Protein Homology CDS 175822 176451 . + 0 ID=cds-WP_059533577.1;Parent=gene-LDO45_RS04925;Dbxref=GenBank:WP_059533577.1;Name=WP_059533577.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756649.1;locus_tag=LDO45_RS04925;product=GTP cyclohydrolase I FolE;protein_id=WP_059533577.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 176451 177254 . + . ID=gene-LDO45_RS04930;Name=LDO45_RS04930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04930;old_locus_tag=BDI4_120185 NZ_CAJZAS010000024.1 Protein Homology CDS 176451 177254 . + 0 ID=cds-WP_059692675.1;Parent=gene-LDO45_RS04930;Dbxref=GenBank:WP_059692675.1;Name=WP_059692675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494586.1;locus_tag=LDO45_RS04930;product=SDR family oxidoreductase;protein_id=WP_059692675.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 177369 178289 . - . ID=gene-LDO45_RS04935;Name=epsC;gbkey=Gene;gene=epsC;gene_biotype=protein_coding;locus_tag=LDO45_RS04935;old_locus_tag=BDI4_120186 NZ_CAJZAS010000024.1 Protein Homology CDS 177369 178289 . - 0 ID=cds-WP_059533573.1;Parent=gene-LDO45_RS04935;Dbxref=GenBank:WP_059533573.1;Name=WP_059533573.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=epsC;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756651.1;locus_tag=LDO45_RS04935;product=serine O-acetyltransferase EpsC;protein_id=WP_059533573.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 178427 178660 . - . ID=gene-LDO45_RS04940;Name=LDO45_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04940;old_locus_tag=BDI4_120187 NZ_CAJZAS010000024.1 Protein Homology CDS 178427 178660 . - 0 ID=cds-WP_011659947.1;Parent=gene-LDO45_RS04940;Dbxref=GenBank:WP_011659947.1;Name=WP_011659947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900672.1;locus_tag=LDO45_RS04940;product=hypothetical protein;protein_id=WP_011659947.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 178939 179349 . + . ID=gene-LDO45_RS04945;Name=LDO45_RS04945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04945;old_locus_tag=BDI4_120188 NZ_CAJZAS010000024.1 Protein Homology CDS 178939 179349 . + 0 ID=cds-WP_059698676.1;Parent=gene-LDO45_RS04945;Dbxref=GenBank:WP_059698676.1;Name=WP_059698676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416097.1;locus_tag=LDO45_RS04945;product=DUF3005 domain-containing protein;protein_id=WP_059698676.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 179690 180157 . + . ID=gene-LDO45_RS04950;Name=LDO45_RS04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04950;old_locus_tag=BDI4_120189 NZ_CAJZAS010000024.1 Protein Homology CDS 179690 180157 . + 0 ID=cds-WP_059533566.1;Parent=gene-LDO45_RS04950;Dbxref=GenBank:WP_059533566.1;Name=WP_059533566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756654.1;locus_tag=LDO45_RS04950;product=universal stress protein;protein_id=WP_059533566.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 180145 180357 . - . ID=gene-LDO45_RS04955;Name=LDO45_RS04955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04955;old_locus_tag=BDI4_120190 NZ_CAJZAS010000024.1 GeneMarkS-2+ CDS 180145 180357 . - 0 ID=cds-WP_223960410.1;Parent=gene-LDO45_RS04955;Dbxref=GenBank:WP_223960410.1;Name=WP_223960410.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS04955;product=hypothetical protein;protein_id=WP_223960410.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 180308 181054 . + . ID=gene-LDO45_RS04960;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=LDO45_RS04960;old_locus_tag=BDI4_120191 NZ_CAJZAS010000024.1 Protein Homology CDS 180308 181054 . + 0 ID=cds-WP_059447453.1;Parent=gene-LDO45_RS04960;Dbxref=GenBank:WP_059447453.1;Name=WP_059447453.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=fnr;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894572.1;locus_tag=LDO45_RS04960;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_059447453.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 181115 182008 . - . ID=gene-LDO45_RS04965;Name=LDO45_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04965;old_locus_tag=BDI4_120192 NZ_CAJZAS010000024.1 Protein Homology CDS 181115 182008 . - 0 ID=cds-WP_059533564.1;Parent=gene-LDO45_RS04965;Dbxref=GenBank:WP_059533564.1;Name=WP_059533564.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028391.1;locus_tag=LDO45_RS04965;product=LysR family transcriptional regulator ArgP;protein_id=WP_059533564.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 182115 182735 . + . ID=gene-LDO45_RS04970;Name=LDO45_RS04970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04970;old_locus_tag=BDI4_120193 NZ_CAJZAS010000024.1 Protein Homology CDS 182115 182735 . + 0 ID=cds-WP_175915051.1;Parent=gene-LDO45_RS04970;Dbxref=GenBank:WP_175915051.1;Name=WP_175915051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894570.1;locus_tag=LDO45_RS04970;product=LysE/ArgO family amino acid transporter;protein_id=WP_175915051.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 183062 184009 . + . ID=gene-LDO45_RS04975;Name=LDO45_RS04975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04975;old_locus_tag=BDI4_120194 NZ_CAJZAS010000024.1 Protein Homology CDS 183062 184009 . + 0 ID=cds-WP_223960370.1;Parent=gene-LDO45_RS04975;Dbxref=GenBank:WP_223960370.1;Name=WP_223960370.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756658.1;locus_tag=LDO45_RS04975;product=aldo/keto reductase;protein_id=WP_223960370.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 184142 184372 . + . ID=gene-LDO45_RS04980;Name=LDO45_RS04980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04980;old_locus_tag=BDI4_120195 NZ_CAJZAS010000024.1 Protein Homology CDS 184142 184372 . + 0 ID=cds-WP_223960372.1;Parent=gene-LDO45_RS04980;Dbxref=GenBank:WP_223960372.1;Name=WP_223960372.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015291.5;locus_tag=LDO45_RS04980;product=GH3 auxin-responsive promoter family protein;protein_id=WP_223960372.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 184736 185446 . + . ID=gene-LDO45_RS04985;Name=LDO45_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04985;old_locus_tag=BDI4_120198 NZ_CAJZAS010000024.1 Protein Homology CDS 184736 185446 . + 0 ID=cds-WP_059533790.1;Parent=gene-LDO45_RS04985;Dbxref=GenBank:WP_059533790.1;Name=WP_059533790.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548732.1;locus_tag=LDO45_RS04985;product=PadR family transcriptional regulator;protein_id=WP_059533790.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 185484 186305 . + . ID=gene-LDO45_RS04990;Name=LDO45_RS04990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04990;old_locus_tag=BDI4_120199 NZ_CAJZAS010000024.1 Protein Homology CDS 185484 186305 . + 0 ID=cds-WP_223960374.1;Parent=gene-LDO45_RS04990;Dbxref=GenBank:WP_223960374.1;Name=WP_223960374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485177.1;locus_tag=LDO45_RS04990;product=siderophore-interacting protein;protein_id=WP_223960374.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 186425 186649 . + . ID=gene-LDO45_RS04995;Name=LDO45_RS04995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS04995;old_locus_tag=BDI4_120200 NZ_CAJZAS010000024.1 Protein Homology CDS 186425 186649 . + 0 ID=cds-WP_223960376.1;Parent=gene-LDO45_RS04995;Dbxref=GenBank:WP_223960376.1;Name=WP_223960376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756670.1;locus_tag=LDO45_RS04995;product=hypothetical protein;protein_id=WP_223960376.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 186676 187257 . - . ID=gene-LDO45_RS05000;Name=LDO45_RS05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05000;old_locus_tag=BDI4_120201 NZ_CAJZAS010000024.1 Protein Homology CDS 186676 187257 . - 0 ID=cds-WP_223960378.1;Parent=gene-LDO45_RS05000;Dbxref=GenBank:WP_223960378.1;Name=WP_223960378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494607.1;locus_tag=LDO45_RS05000;product=undecaprenyl-diphosphatase;protein_id=WP_223960378.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 187716 188456 . + . ID=gene-LDO45_RS05005;Name=LDO45_RS05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05005;old_locus_tag=BDI4_120203 NZ_CAJZAS010000024.1 Protein Homology CDS 187716 188456 . + 0 ID=cds-WP_006485181.1;Parent=gene-LDO45_RS05005;Dbxref=GenBank:WP_006485181.1;Name=WP_006485181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724247.1;locus_tag=LDO45_RS05005;product=acetoacetate decarboxylase;protein_id=WP_006485181.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 188509 189294 . + . ID=gene-LDO45_RS05010;Name=LDO45_RS05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05010;old_locus_tag=BDI4_120204 NZ_CAJZAS010000024.1 Protein Homology CDS 188509 189294 . + 0 ID=cds-WP_107938172.1;Parent=gene-LDO45_RS05010;Dbxref=GenBank:WP_107938172.1;Name=WP_107938172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604033.1;locus_tag=LDO45_RS05010;product=3-hydroxybutyrate dehydrogenase;protein_id=WP_107938172.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 189425 190642 . + . ID=gene-LDO45_RS05015;Name=LDO45_RS05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05015;old_locus_tag=BDI4_120206 NZ_CAJZAS010000024.1 Protein Homology CDS 189425 190642 . + 0 ID=cds-WP_059529084.1;Parent=gene-LDO45_RS05015;Dbxref=GenBank:WP_059529084.1;Name=WP_059529084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194462.1;locus_tag=LDO45_RS05015;product=patatin-like phospholipase family protein;protein_id=WP_059529084.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 190702 191166 . + . ID=gene-LDO45_RS05020;Name=LDO45_RS05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05020;old_locus_tag=BDI4_120205 NZ_CAJZAS010000024.1 Protein Homology CDS 190702 191166 . + 0 ID=cds-WP_059698218.1;Parent=gene-LDO45_RS05020;Dbxref=GenBank:WP_059698218.1;Name=WP_059698218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751648.1;locus_tag=LDO45_RS05020;product=hypothetical protein;protein_id=WP_059698218.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 191228 192112 . - . ID=gene-LDO45_RS05025;Name=LDO45_RS05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05025;old_locus_tag=BDI4_120207 NZ_CAJZAS010000024.1 Protein Homology CDS 191228 192112 . - 0 ID=cds-WP_223960380.1;Parent=gene-LDO45_RS05025;Dbxref=GenBank:WP_223960380.1;Name=WP_223960380.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548739.1;locus_tag=LDO45_RS05025;product=LysR family transcriptional regulator;protein_id=WP_223960380.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 192231 193187 . + . ID=gene-LDO45_RS05030;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=LDO45_RS05030;old_locus_tag=BDI4_120209 NZ_CAJZAS010000024.1 Protein Homology CDS 192231 193187 . + 0 ID=cds-WP_223960382.1;Parent=gene-LDO45_RS05030;Dbxref=GenBank:WP_223960382.1;Name=WP_223960382.1;Ontology_term=GO:0006526,GO:0003942,GO:0005737;gbkey=CDS;gene=argC;go_component=cytoplasm|0005737||IEA;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900691.1;locus_tag=LDO45_RS05030;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_223960382.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 193339 194262 . - . ID=gene-LDO45_RS05035;Name=LDO45_RS05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05035;old_locus_tag=BDI4_120210 NZ_CAJZAS010000024.1 Protein Homology CDS 193339 194262 . - 0 ID=cds-WP_059689202.1;Parent=gene-LDO45_RS05035;Dbxref=GenBank:WP_059689202.1;Name=WP_059689202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485150.1;locus_tag=LDO45_RS05035;product=LysR substrate-binding domain-containing protein;protein_id=WP_059689202.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 194380 195465 . + . ID=gene-LDO45_RS05040;Name=LDO45_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05040;old_locus_tag=BDI4_120211 NZ_CAJZAS010000024.1 Protein Homology CDS 194380 195465 . + 0 ID=cds-WP_223960384.1;Parent=gene-LDO45_RS05040;Dbxref=GenBank:WP_223960384.1;Name=WP_223960384.1;Ontology_term=GO:0046395,GO:0009027,GO:0051287;gbkey=CDS;go_function=tartrate dehydrogenase activity|0009027||IEA,NAD binding|0051287||IEA;go_process=carboxylic acid catabolic process|0046395||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659912.1;locus_tag=LDO45_RS05040;product=tartrate dehydrogenase;protein_id=WP_223960384.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 195899 196378 . - . ID=gene-LDO45_RS05045;Name=LDO45_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05045;old_locus_tag=BDI4_120212 NZ_CAJZAS010000024.1 Protein Homology CDS 195899 196378 . - 0 ID=cds-WP_012365039.1;Parent=gene-LDO45_RS05045;Dbxref=GenBank:WP_012365039.1;Name=WP_012365039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894511.1;locus_tag=LDO45_RS05045;product=nuclear transport factor 2 family protein;protein_id=WP_012365039.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 196434 197048 . - . ID=gene-LDO45_RS05050;Name=LDO45_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05050;old_locus_tag=BDI4_120213 NZ_CAJZAS010000024.1 Protein Homology CDS 196434 197048 . - 0 ID=cds-WP_223960386.1;Parent=gene-LDO45_RS05050;Dbxref=GenBank:WP_223960386.1;Name=WP_223960386.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900695.1;locus_tag=LDO45_RS05050;product=TetR/AcrR family transcriptional regulator;protein_id=WP_223960386.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 197240 197878 . + . ID=gene-LDO45_RS05055;Name=LDO45_RS05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05055;old_locus_tag=BDI4_120214 NZ_CAJZAS010000024.1 Protein Homology CDS 197240 197878 . + 0 ID=cds-WP_059529066.1;Parent=gene-LDO45_RS05055;Dbxref=GenBank:WP_059529066.1;Name=WP_059529066.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485174.1;locus_tag=LDO45_RS05055;product=GNAT family N-acetyltransferase;protein_id=WP_059529066.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 197875 198276 . + . ID=gene-LDO45_RS05060;Name=LDO45_RS05060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05060;old_locus_tag=BDI4_120215 NZ_CAJZAS010000024.1 Protein Homology CDS 197875 198276 . + 0 ID=cds-WP_223960388.1;Parent=gene-LDO45_RS05060;Dbxref=GenBank:WP_223960388.1;Name=WP_223960388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900697.1;locus_tag=LDO45_RS05060;product=hypothetical protein;protein_id=WP_223960388.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 198801 199829 . - . ID=gene-LDO45_RS05065;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=LDO45_RS05065;old_locus_tag=BDI4_120217 NZ_CAJZAS010000024.1 Protein Homology CDS 198801 199829 . - 0 ID=cds-WP_059529060.1;Parent=gene-LDO45_RS05065;Dbxref=GenBank:WP_059529060.1;Name=WP_059529060.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012403454.1;locus_tag=LDO45_RS05065;product=L-threonine 3-dehydrogenase;protein_id=WP_059529060.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 199843 201042 . - . ID=gene-LDO45_RS05070;Name=LDO45_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05070;old_locus_tag=BDI4_120218 NZ_CAJZAS010000024.1 Protein Homology CDS 199843 201042 . - 0 ID=cds-WP_059529057.1;Parent=gene-LDO45_RS05070;Dbxref=GenBank:WP_059529057.1;Name=WP_059529057.1;Ontology_term=GO:0009058,GO:0008890,GO:0030170;gbkey=CDS;go_function=glycine C-acetyltransferase activity|0008890||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411924.1;locus_tag=LDO45_RS05070;product=glycine C-acetyltransferase;protein_id=WP_059529057.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 201204 201827 . + . ID=gene-LDO45_RS05075;Name=LDO45_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05075;old_locus_tag=BDI4_120219 NZ_CAJZAS010000024.1 Protein Homology CDS 201204 201827 . + 0 ID=cds-WP_223960389.1;Parent=gene-LDO45_RS05075;Dbxref=GenBank:WP_223960389.1;Name=WP_223960389.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028360.1;locus_tag=LDO45_RS05075;product=helix-turn-helix domain-containing protein;protein_id=WP_223960389.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 201945 202322 . + . ID=gene-LDO45_RS05080;Name=LDO45_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05080;old_locus_tag=BDI4_120220 NZ_CAJZAS010000024.1 Protein Homology CDS 201945 202322 . + 0 ID=cds-WP_223960391.1;Parent=gene-LDO45_RS05080;Dbxref=GenBank:WP_223960391.1;Name=WP_223960391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548749.1;locus_tag=LDO45_RS05080;product=DUF2471 family protein;protein_id=WP_223960391.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 202425 203438 . + . ID=gene-LDO45_RS05085;Name=LDO45_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05085;old_locus_tag=BDI4_120221 NZ_CAJZAS010000024.1 Protein Homology CDS 202425 203438 . + 0 ID=cds-WP_223960393.1;Parent=gene-LDO45_RS05085;Dbxref=GenBank:WP_223960393.1;Name=WP_223960393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339070.1;locus_tag=LDO45_RS05085;product=tyrosine-type recombinase/integrase;protein_id=WP_223960393.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 203578 204759 . - . ID=gene-LDO45_RS05090;Name=LDO45_RS05090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05090;old_locus_tag=BDI4_120222 NZ_CAJZAS010000024.1 Protein Homology CDS 203578 204759 . - 0 ID=cds-WP_059529045.1;Parent=gene-LDO45_RS05090;Dbxref=GenBank:WP_059529045.1;Name=WP_059529045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751660.1;locus_tag=LDO45_RS05090;product=DNA-binding protein;protein_id=WP_059529045.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 206581 207945 . + . ID=gene-LDO45_RS05095;Name=LDO45_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05095;old_locus_tag=BDI4_120224 NZ_CAJZAS010000024.1 Protein Homology CDS 206581 207945 . + 0 ID=cds-WP_059689210.1;Parent=gene-LDO45_RS05095;Dbxref=GenBank:WP_059689210.1;Name=WP_059689210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004544877.1;locus_tag=LDO45_RS05095;product=replication initiation protein;protein_id=WP_059689210.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 208036 209097 . - . ID=gene-LDO45_RS05100;Name=LDO45_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05100;old_locus_tag=BDI4_120225 NZ_CAJZAS010000024.1 Protein Homology CDS 208036 209097 . - 0 ID=cds-WP_059689211.1;Parent=gene-LDO45_RS05100;Dbxref=GenBank:WP_059689211.1;Name=WP_059689211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480194.1;locus_tag=LDO45_RS05100;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_059689211.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 209121 209783 . - . ID=gene-LDO45_RS05105;Name=parA;gbkey=Gene;gene=parA;gene_biotype=protein_coding;locus_tag=LDO45_RS05105;old_locus_tag=BDI4_120226 NZ_CAJZAS010000024.1 Protein Homology CDS 209121 209783 . - 0 ID=cds-WP_040138954.1;Parent=gene-LDO45_RS05105;Dbxref=GenBank:WP_040138954.1;Name=WP_040138954.1;gbkey=CDS;gene=parA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900706.1;locus_tag=LDO45_RS05105;product=ParA family partition ATPase;protein_id=WP_040138954.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 210680 211036 . + . ID=gene-LDO45_RS05110;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=LDO45_RS05110;old_locus_tag=BDI4_120227 NZ_CAJZAS010000024.1 Protein Homology CDS 210680 211036 . + 0 ID=cds-WP_059529036.1;Parent=gene-LDO45_RS05110;Dbxref=GenBank:WP_059529036.1;Name=WP_059529036.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724258.1;locus_tag=LDO45_RS05110;product=arsenate reductase (glutaredoxin);protein_id=WP_059529036.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 211254 211493 . - . ID=gene-LDO45_RS05115;Name=LDO45_RS05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05115;old_locus_tag=BDI4_120228 NZ_CAJZAS010000024.1 Protein Homology CDS 211254 211493 . - 0 ID=cds-WP_223960394.1;Parent=gene-LDO45_RS05115;Dbxref=GenBank:WP_223960394.1;Name=WP_223960394.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367161.1;locus_tag=LDO45_RS05115;product=zf-HC2 domain-containing protein;protein_id=WP_223960394.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 211474 212070 . - . ID=gene-LDO45_RS05120;Name=LDO45_RS05120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05120;old_locus_tag=BDI4_120229 NZ_CAJZAS010000024.1 Protein Homology CDS 211474 212070 . - 0 ID=cds-WP_059529031.1;Parent=gene-LDO45_RS05120;Dbxref=GenBank:WP_059529031.1;Name=WP_059529031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900709.1;locus_tag=LDO45_RS05120;product=RNA polymerase factor sigma-70;protein_id=WP_059529031.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 212444 212998 . + . ID=gene-LDO45_RS05125;Name=LDO45_RS05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05125;old_locus_tag=BDI4_120230 NZ_CAJZAS010000024.1 Protein Homology CDS 212444 212998 . + 0 ID=cds-WP_059529029.1;Parent=gene-LDO45_RS05125;Dbxref=GenBank:WP_059529029.1;Name=WP_059529029.1;Ontology_term=GO:0008752,GO:0010181,GO:0016491,GO:0052873;gbkey=CDS;go_function=FMN reductase (NAD(P)H) activity|0008752||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480199.1;locus_tag=LDO45_RS05125;product=NADPH-dependent FMN reductase;protein_id=WP_059529029.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 213044 215287 . - . ID=gene-LDO45_RS05130;Name=LDO45_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05130;old_locus_tag=BDI4_120231 NZ_CAJZAS010000024.1 Protein Homology CDS 213044 215287 . - 0 ID=cds-WP_059529027.1;Parent=gene-LDO45_RS05130;Dbxref=GenBank:WP_059529027.1;Name=WP_059529027.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480200.1;locus_tag=LDO45_RS05130;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_059529027.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 215730 216098 . + . ID=gene-LDO45_RS05135;Name=LDO45_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05135;old_locus_tag=BDI4_120233 NZ_CAJZAS010000024.1 Protein Homology CDS 215730 216098 . + 0 ID=cds-WP_011548759.1;Parent=gene-LDO45_RS05135;Dbxref=GenBank:WP_011548759.1;Name=WP_011548759.1;Ontology_term=GO:0000160,GO:0000156;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766715.1;locus_tag=LDO45_RS05135;product=response regulator;protein_id=WP_011548759.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 216091 216717 . + . ID=gene-LDO45_RS05140;Name=LDO45_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05140;old_locus_tag=BDI4_120234 NZ_CAJZAS010000024.1 Protein Homology CDS 216091 216717 . + 0 ID=cds-WP_059529024.1;Parent=gene-LDO45_RS05140;Dbxref=GenBank:WP_059529024.1;Name=WP_059529024.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530631.1;locus_tag=LDO45_RS05140;product=chemotaxis protein CheC;protein_id=WP_059529024.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 216714 217664 . + . ID=gene-LDO45_RS05145;Name=LDO45_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05145;old_locus_tag=BDI4_120235 NZ_CAJZAS010000024.1 Protein Homology CDS 216714 217664 . + 0 ID=cds-WP_059689215.1;Parent=gene-LDO45_RS05145;Dbxref=GenBank:WP_059689215.1;Name=WP_059689215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757766.1;locus_tag=LDO45_RS05145;product=GGDEF domain-containing protein;protein_id=WP_059689215.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 217703 218587 . - . ID=gene-LDO45_RS05150;Name=LDO45_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05150;old_locus_tag=BDI4_120236 NZ_CAJZAS010000024.1 Protein Homology CDS 217703 218587 . - 0 ID=cds-WP_059529019.1;Parent=gene-LDO45_RS05150;Dbxref=GenBank:WP_059529019.1;Name=WP_059529019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766712.1;locus_tag=LDO45_RS05150;product=alpha/beta fold hydrolase;protein_id=WP_059529019.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 218795 219127 . + . ID=gene-LDO45_RS05155;Name=LDO45_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05155;old_locus_tag=BDI4_120237 NZ_CAJZAS010000024.1 Protein Homology CDS 218795 219127 . + 0 ID=cds-WP_059529016.1;Parent=gene-LDO45_RS05155;Dbxref=GenBank:WP_059529016.1;Name=WP_059529016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766711.1;locus_tag=LDO45_RS05155;product=hypothetical protein;protein_id=WP_059529016.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 219385 220233 . + . ID=gene-LDO45_RS05160;Name=hpnD;gbkey=Gene;gene=hpnD;gene_biotype=protein_coding;locus_tag=LDO45_RS05160;old_locus_tag=BDI4_120239 NZ_CAJZAS010000024.1 Protein Homology CDS 219385 220233 . + 0 ID=cds-WP_059529130.1;Parent=gene-LDO45_RS05160;Dbxref=GenBank:WP_059529130.1;Name=WP_059529130.1;Ontology_term=GO:0016117,GO:0016767;gbkey=CDS;gene=hpnD;go_function=geranylgeranyl-diphosphate geranylgeranyltransferase activity|0016767||IEA;go_process=carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404656.1;locus_tag=LDO45_RS05160;product=presqualene diphosphate synthase HpnD;protein_id=WP_059529130.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 220238 221491 . + . ID=gene-LDO45_RS05165;Name=hpnE;gbkey=Gene;gene=hpnE;gene_biotype=protein_coding;locus_tag=LDO45_RS05165;old_locus_tag=BDI4_120240 NZ_CAJZAS010000024.1 Protein Homology CDS 220238 221491 . + 0 ID=cds-WP_223960396.1;Parent=gene-LDO45_RS05165;Dbxref=GenBank:WP_223960396.1;Name=WP_223960396.1;Ontology_term=GO:0016491;gbkey=CDS;gene=hpnE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493654.1;locus_tag=LDO45_RS05165;product=hydroxysqualene dehydroxylase HpnE;protein_id=WP_223960396.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq gene 221503 223476 . + . ID=gene-LDO45_RS05170;Name=shc;gbkey=Gene;gene=shc;gene_biotype=protein_coding;locus_tag=LDO45_RS05170;old_locus_tag=BDI4_120241 NZ_CAJZAS010000024.1 Protein Homology CDS 221503 223476 . + 0 ID=cds-WP_059529011.1;Parent=gene-LDO45_RS05170;Dbxref=GenBank:WP_059529011.1;Name=WP_059529011.1;Ontology_term=GO:0019746,GO:0016866,GO:0051007;gbkey=CDS;gene=shc;go_function=intramolecular transferase activity|0016866||IEA,squalene-hopene cyclase activity|0051007||IEA;go_process=hopanoid biosynthetic process|0019746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548765.1;locus_tag=LDO45_RS05170;product=squalene--hopene cyclase;protein_id=WP_059529011.1;transl_table=11 NZ_CAJZAS010000024.1 RefSeq pseudogene 223480 223782 . + . ID=gene-LDO45_RS05175;Name=LDO45_RS05175;end_range=223782,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS05175;partial=true;pseudo=true NZ_CAJZAS010000024.1 Protein Homology CDS 223480 223782 . + 0 ID=cds-LDO45_RS05175;Parent=gene-LDO45_RS05175;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=223782,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496236.1;locus_tag=LDO45_RS05175;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000025.1 1 94902 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000025.1 RefSeq region 1 94902 . + . ID=NZ_CAJZAS010000025.1:1..94902;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_120 NZ_CAJZAS010000025.1 RefSeq pseudogene 1 257 . + . ID=gene-LDO45_RS05180;Name=LDO45_RS05180;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS05180;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000025.1 Protein Homology CDS 1 257 . + 2 ID=cds-LDO45_RS05180;Parent=gene-LDO45_RS05180;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013093838.1;locus_tag=LDO45_RS05180;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 684 989 . - . ID=gene-LDO45_RS05185;Name=LDO45_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05185;old_locus_tag=BDI4_1200002 NZ_CAJZAS010000025.1 Protein Homology CDS 684 989 . - 0 ID=cds-WP_059810458.1;Parent=gene-LDO45_RS05185;Dbxref=GenBank:WP_059810458.1;Name=WP_059810458.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010098911.1;locus_tag=LDO45_RS05185;product=Txe/YoeB family addiction module toxin;protein_id=WP_059810458.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 967 1239 . - . ID=gene-LDO45_RS05190;Name=LDO45_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05190;old_locus_tag=BDI4_1200004 NZ_CAJZAS010000025.1 Protein Homology CDS 967 1239 . - 0 ID=cds-WP_081061912.1;Parent=gene-LDO45_RS05190;Dbxref=GenBank:WP_081061912.1;Name=WP_081061912.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010098913.1;locus_tag=LDO45_RS05190;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_081061912.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 1571 1753 . - . ID=gene-LDO45_RS05195;Name=LDO45_RS05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05195;old_locus_tag=BDI4_1200005 NZ_CAJZAS010000025.1 Protein Homology CDS 1571 1753 . - 0 ID=cds-WP_223960414.1;Parent=gene-LDO45_RS05195;Dbxref=GenBank:WP_223960414.1;Name=WP_223960414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009967279.1;locus_tag=LDO45_RS05195;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_223960414.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 1772 1939 . + . ID=gene-LDO45_RS05200;Name=LDO45_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05200 NZ_CAJZAS010000025.1 GeneMarkS-2+ CDS 1772 1939 . + 0 ID=cds-WP_223960416.1;Parent=gene-LDO45_RS05200;Dbxref=GenBank:WP_223960416.1;Name=WP_223960416.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS05200;product=hypothetical protein;protein_id=WP_223960416.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 2119 2769 . + . ID=gene-LDO45_RS05205;Name=LDO45_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05205;old_locus_tag=BDI4_1200007 NZ_CAJZAS010000025.1 Protein Homology CDS 2119 2769 . + 0 ID=cds-WP_223960531.1;Parent=gene-LDO45_RS05205;Dbxref=GenBank:WP_223960531.1;Name=WP_223960531.1;Ontology_term=GO:0009432,GO:0018142,GO:0003697,GO:0008233;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA,peptidase activity|0008233||IEA;go_process=SOS response|0009432||IEA,obsolete protein-DNA covalent cross-linking|0018142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764383.1;locus_tag=LDO45_RS05205;product=SOS response-associated peptidase;protein_id=WP_223960531.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 2993 3433 . - . ID=gene-LDO45_RS05210;Name=LDO45_RS05210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05210 NZ_CAJZAS010000025.1 Protein Homology CDS 2993 3433 . - 0 ID=cds-WP_223960418.1;Parent=gene-LDO45_RS05210;Dbxref=GenBank:WP_223960418.1;Name=WP_223960418.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046506.1;locus_tag=LDO45_RS05210;product=hypothetical protein;protein_id=WP_223960418.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 3433 3900 . - . ID=gene-LDO45_RS05215;Name=LDO45_RS05215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05215;old_locus_tag=BDI4_1200009 NZ_CAJZAS010000025.1 Protein Homology CDS 3433 3900 . - 0 ID=cds-WP_223960420.1;Parent=gene-LDO45_RS05215;Dbxref=GenBank:WP_223960420.1;Name=WP_223960420.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024835.5;locus_tag=LDO45_RS05215;product=helix-turn-helix domain-containing protein;protein_id=WP_223960420.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 3878 4288 . - . ID=gene-LDO45_RS05220;Name=LDO45_RS05220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05220;old_locus_tag=BDI4_1200010 NZ_CAJZAS010000025.1 GeneMarkS-2+ CDS 3878 4288 . - 0 ID=cds-WP_223960422.1;Parent=gene-LDO45_RS05220;Dbxref=GenBank:WP_223960422.1;Name=WP_223960422.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS05220;product=hypothetical protein;protein_id=WP_223960422.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 4288 4635 . - . ID=gene-LDO45_RS05225;Name=LDO45_RS05225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05225 NZ_CAJZAS010000025.1 GeneMarkS-2+ CDS 4288 4635 . - 0 ID=cds-WP_223960424.1;Parent=gene-LDO45_RS05225;Dbxref=GenBank:WP_223960424.1;Name=WP_223960424.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS05225;product=hypothetical protein;protein_id=WP_223960424.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 4654 4776 . + . ID=gene-LDO45_RS34200;Name=LDO45_RS34200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34200 NZ_CAJZAS010000025.1 GeneMarkS-2+ CDS 4654 4776 . + 0 ID=cds-WP_290370996.1;Parent=gene-LDO45_RS34200;Dbxref=GenBank:WP_290370996.1;Name=WP_290370996.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34200;product=hypothetical protein;protein_id=WP_290370996.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 4939 5202 . - . ID=gene-LDO45_RS05230;Name=LDO45_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05230;old_locus_tag=BDI4_1200013 NZ_CAJZAS010000025.1 Protein Homology CDS 4939 5202 . - 0 ID=cds-WP_223960426.1;Parent=gene-LDO45_RS05230;Dbxref=GenBank:WP_223960426.1;Name=WP_223960426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349749.1;locus_tag=LDO45_RS05230;product=HPr family phosphocarrier protein;protein_id=WP_223960426.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 5570 5914 . + . ID=gene-LDO45_RS05235;Name=LDO45_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05235;old_locus_tag=BDI4_1200014 NZ_CAJZAS010000025.1 Protein Homology CDS 5570 5914 . + 0 ID=cds-WP_031401187.1;Parent=gene-LDO45_RS05235;Dbxref=GenBank:WP_031401187.1;Name=WP_031401187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893416.1;locus_tag=LDO45_RS05235;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_031401187.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 5961 6797 . + . ID=gene-LDO45_RS05240;Name=LDO45_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05240;old_locus_tag=BDI4_1200015 NZ_CAJZAS010000025.1 Protein Homology CDS 5961 6797 . + 0 ID=cds-WP_059693000.1;Parent=gene-LDO45_RS05240;Dbxref=GenBank:WP_059693000.1;Name=WP_059693000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498246.1;locus_tag=LDO45_RS05240;product=hypothetical protein;protein_id=WP_059693000.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 6833 7018 . - . ID=gene-LDO45_RS05245;Name=LDO45_RS05245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05245;old_locus_tag=BDI4_1200016 NZ_CAJZAS010000025.1 Protein Homology CDS 6833 7018 . - 0 ID=cds-WP_059452402.1;Parent=gene-LDO45_RS05245;Dbxref=GenBank:WP_059452402.1;Name=WP_059452402.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661420.1;locus_tag=LDO45_RS05245;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_059452402.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 7460 7810 . + . ID=gene-LDO45_RS05250;Name=LDO45_RS05250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05250;old_locus_tag=BDI4_1200017 NZ_CAJZAS010000025.1 Protein Homology CDS 7460 7810 . + 0 ID=cds-WP_059536789.1;Parent=gene-LDO45_RS05250;Dbxref=GenBank:WP_059536789.1;Name=WP_059536789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752899.1;locus_tag=LDO45_RS05250;product=hypothetical protein;protein_id=WP_059536789.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 7807 8019 . + . ID=gene-LDO45_RS05255;Name=LDO45_RS05255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05255;old_locus_tag=BDI4_1200018 NZ_CAJZAS010000025.1 Protein Homology CDS 7807 8019 . + 0 ID=cds-WP_059511443.1;Parent=gene-LDO45_RS05255;Dbxref=GenBank:WP_059511443.1;Name=WP_059511443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489184.1;locus_tag=LDO45_RS05255;product=DUF2909 domain-containing protein;protein_id=WP_059511443.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 8092 8607 . - . ID=gene-LDO45_RS05260;Name=LDO45_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05260;old_locus_tag=BDI4_1200019 NZ_CAJZAS010000025.1 Protein Homology CDS 8092 8607 . - 0 ID=cds-WP_059816890.1;Parent=gene-LDO45_RS05260;Dbxref=GenBank:WP_059816890.1;Name=WP_059816890.1;Ontology_term=GO:0022900,GO:0008137,GO:0048038,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,quinone binding|0048038||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405235.1;locus_tag=LDO45_RS05260;product=NADH-quinone oxidoreductase subunit B family protein;protein_id=WP_059816890.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 8607 10169 . - . ID=gene-LDO45_RS05265;Name=LDO45_RS05265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05265;old_locus_tag=BDI4_1200020 NZ_CAJZAS010000025.1 Protein Homology CDS 8607 10169 . - 0 ID=cds-WP_223960428.1;Parent=gene-LDO45_RS05265;Dbxref=GenBank:WP_223960428.1;Name=WP_223960428.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008917175.1;locus_tag=LDO45_RS05265;product=NADH-quinone oxidoreductase subunit C;protein_id=WP_223960428.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 10173 11636 . - . ID=gene-LDO45_RS05270;Name=LDO45_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05270;old_locus_tag=BDI4_1200021 NZ_CAJZAS010000025.1 Protein Homology CDS 10173 11636 . - 0 ID=cds-WP_223960430.1;Parent=gene-LDO45_RS05270;Dbxref=GenBank:WP_223960430.1;Name=WP_223960430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018437146.1;locus_tag=LDO45_RS05270;product=hydrogenase 4 subunit F;protein_id=WP_223960430.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 11629 12288 . - . ID=gene-LDO45_RS05275;Name=LDO45_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05275;old_locus_tag=BDI4_1200022 NZ_CAJZAS010000025.1 Protein Homology CDS 11629 12288 . - 0 ID=cds-WP_059536774.1;Parent=gene-LDO45_RS05275;Dbxref=GenBank:WP_059536774.1;Name=WP_059536774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007735013.1;locus_tag=LDO45_RS05275;product=hypothetical protein;protein_id=WP_059536774.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 12289 13239 . - . ID=gene-LDO45_RS05280;Name=LDO45_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05280;old_locus_tag=BDI4_1200023 NZ_CAJZAS010000025.1 Protein Homology CDS 12289 13239 . - 0 ID=cds-WP_059536771.1;Parent=gene-LDO45_RS05280;Dbxref=GenBank:WP_059536771.1;Name=WP_059536771.1;Ontology_term=GO:0022900,GO:0016491,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=oxidoreductase activity|0016491||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554989.1;locus_tag=LDO45_RS05280;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_059536771.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 13233 15239 . - . ID=gene-LDO45_RS05285;Name=hyfB;gbkey=Gene;gene=hyfB;gene_biotype=protein_coding;locus_tag=LDO45_RS05285;old_locus_tag=BDI4_1200024 NZ_CAJZAS010000025.1 Protein Homology CDS 13233 15239 . - 0 ID=cds-WP_223960432.1;Parent=gene-LDO45_RS05285;Dbxref=GenBank:WP_223960432.1;Name=WP_223960432.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hyfB;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018437145.1;locus_tag=LDO45_RS05285;product=hydrogenase 4 subunit B;protein_id=WP_223960432.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 15486 16253 . + . ID=gene-LDO45_RS05290;Name=LDO45_RS05290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05290;old_locus_tag=BDI4_1200025 NZ_CAJZAS010000025.1 Protein Homology CDS 15486 16253 . + 0 ID=cds-WP_059536764.1;Parent=gene-LDO45_RS05290;Dbxref=GenBank:WP_059536764.1;Name=WP_059536764.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405241.1;locus_tag=LDO45_RS05290;product=YoaK family protein;protein_id=WP_059536764.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 16363 16560 . + . ID=gene-LDO45_RS05295;Name=LDO45_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05295;old_locus_tag=BDI4_1200026 NZ_CAJZAS010000025.1 Protein Homology CDS 16363 16560 . + 0 ID=cds-WP_059536760.1;Parent=gene-LDO45_RS05295;Dbxref=GenBank:WP_059536760.1;Name=WP_059536760.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007735029.1;locus_tag=LDO45_RS05295;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_059536760.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 16574 17410 . - . ID=gene-LDO45_RS05300;Name=LDO45_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05300;old_locus_tag=BDI4_1200027 NZ_CAJZAS010000025.1 Protein Homology CDS 16574 17410 . - 0 ID=cds-WP_223960434.1;Parent=gene-LDO45_RS05300;Dbxref=GenBank:WP_223960434.1;Name=WP_223960434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405243.1;locus_tag=LDO45_RS05300;product=spermidine synthase;protein_id=WP_223960434.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 17400 17738 . - . ID=gene-LDO45_RS05305;Name=LDO45_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05305;old_locus_tag=BDI4_1200028 NZ_CAJZAS010000025.1 Protein Homology CDS 17400 17738 . - 0 ID=cds-WP_223960436.1;Parent=gene-LDO45_RS05305;Dbxref=GenBank:WP_223960436.1;Name=WP_223960436.1;Ontology_term=GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018437142.1;locus_tag=LDO45_RS05305;product=alkylphosphonate utilization protein;protein_id=WP_223960436.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 17945 18391 . + . ID=gene-LDO45_RS05310;Name=LDO45_RS05310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05310;old_locus_tag=BDI4_1200030 NZ_CAJZAS010000025.1 Protein Homology CDS 17945 18391 . + 0 ID=cds-WP_223960438.1;Parent=gene-LDO45_RS05310;Dbxref=GenBank:WP_223960438.1;Name=WP_223960438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010097218.1;locus_tag=LDO45_RS05310;product=hypothetical protein;protein_id=WP_223960438.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 18711 18932 . + . ID=gene-LDO45_RS05315;Name=LDO45_RS05315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05315;old_locus_tag=BDI4_1200031 NZ_CAJZAS010000025.1 Protein Homology CDS 18711 18932 . + 0 ID=cds-WP_082721967.1;Parent=gene-LDO45_RS05315;Dbxref=GenBank:WP_082721967.1;Name=WP_082721967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336703.1;locus_tag=LDO45_RS05315;product=hypothetical protein;protein_id=WP_082721967.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 19116 19595 . + . ID=gene-LDO45_RS05320;Name=LDO45_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05320;old_locus_tag=BDI4_1200032 NZ_CAJZAS010000025.1 GeneMarkS-2+ CDS 19116 19595 . + 0 ID=cds-WP_223960439.1;Parent=gene-LDO45_RS05320;Dbxref=GenBank:WP_223960439.1;Name=WP_223960439.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS05320;product=hypothetical protein;protein_id=WP_223960439.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 19692 20114 . + . ID=gene-LDO45_RS05325;Name=LDO45_RS05325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05325;old_locus_tag=BDI4_1200033 NZ_CAJZAS010000025.1 Protein Homology CDS 19692 20114 . + 0 ID=cds-WP_059536754.1;Parent=gene-LDO45_RS05325;Dbxref=GenBank:WP_059536754.1;Name=WP_059536754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007587547.1;locus_tag=LDO45_RS05325;product=amino acid-binding protein;protein_id=WP_059536754.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 20723 21286 . - . ID=gene-LDO45_RS05330;Name=LDO45_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05330;old_locus_tag=BDI4_1200034 NZ_CAJZAS010000025.1 Protein Homology CDS 20723 21286 . - 0 ID=cds-WP_223960441.1;Parent=gene-LDO45_RS05330;Dbxref=GenBank:WP_223960441.1;Name=WP_223960441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759512.1;locus_tag=LDO45_RS05330;product=Hsp20/alpha crystallin family protein;protein_id=WP_223960441.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 21337 21537 . - . ID=gene-LDO45_RS05335;Name=LDO45_RS05335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05335 NZ_CAJZAS010000025.1 GeneMarkS-2+ CDS 21337 21537 . - 0 ID=cds-WP_223960443.1;Parent=gene-LDO45_RS05335;Dbxref=GenBank:WP_223960443.1;Name=WP_223960443.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS05335;product=hypothetical protein;protein_id=WP_223960443.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 21693 22100 . - . ID=gene-LDO45_RS05340;Name=LDO45_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05340;old_locus_tag=BDI4_1200035 NZ_CAJZAS010000025.1 Protein Homology CDS 21693 22100 . - 0 ID=cds-WP_223960445.1;Parent=gene-LDO45_RS05340;Dbxref=GenBank:WP_223960445.1;Name=WP_223960445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013093384.1;locus_tag=LDO45_RS05340;product=Hsp20/alpha crystallin family protein;protein_id=WP_223960445.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 22116 22556 . - . ID=gene-LDO45_RS05345;Name=LDO45_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05345;old_locus_tag=BDI4_1200036 NZ_CAJZAS010000025.1 Protein Homology CDS 22116 22556 . - 0 ID=cds-WP_059700852.1;Parent=gene-LDO45_RS05345;Dbxref=GenBank:WP_059700852.1;Name=WP_059700852.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751146.1;locus_tag=LDO45_RS05345;product=Hsp20/alpha crystallin family protein;protein_id=WP_059700852.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 22806 23189 . + . ID=gene-LDO45_RS05350;Name=LDO45_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05350;old_locus_tag=BDI4_1200037 NZ_CAJZAS010000025.1 Protein Homology CDS 22806 23189 . + 0 ID=cds-WP_223960447.1;Parent=gene-LDO45_RS05350;Dbxref=GenBank:WP_223960447.1;Name=WP_223960447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094374.1;locus_tag=LDO45_RS05350;product=hypothetical protein;protein_id=WP_223960447.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 23231 24535 . - . ID=gene-LDO45_RS05355;Name=LDO45_RS05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05355;old_locus_tag=BDI4_1200038 NZ_CAJZAS010000025.1 Protein Homology CDS 23231 24535 . - 0 ID=cds-WP_223960449.1;Parent=gene-LDO45_RS05355;Dbxref=GenBank:WP_223960449.1;Name=WP_223960449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372576.1;locus_tag=LDO45_RS05355;product=HipA domain-containing protein;protein_id=WP_223960449.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 24525 24809 . - . ID=gene-LDO45_RS05360;Name=LDO45_RS05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05360;old_locus_tag=BDI4_1200039 NZ_CAJZAS010000025.1 Protein Homology CDS 24525 24809 . - 0 ID=cds-WP_059700854.1;Parent=gene-LDO45_RS05360;Dbxref=GenBank:WP_059700854.1;Name=WP_059700854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880019.1;locus_tag=LDO45_RS05360;product=helix-turn-helix transcriptional regulator;protein_id=WP_059700854.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 25230 25940 . + . ID=gene-LDO45_RS05365;Name=LDO45_RS05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05365;old_locus_tag=BDI4_1200040 NZ_CAJZAS010000025.1 Protein Homology CDS 25230 25940 . + 0 ID=cds-WP_223960451.1;Parent=gene-LDO45_RS05365;Dbxref=GenBank:WP_223960451.1;Name=WP_223960451.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661407.1;locus_tag=LDO45_RS05365;product=MgtC/SapB family protein;protein_id=WP_223960451.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 25984 28173 . - . ID=gene-LDO45_RS05370;Name=LDO45_RS05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05370;old_locus_tag=BDI4_1200041 NZ_CAJZAS010000025.1 Protein Homology CDS 25984 28173 . - 0 ID=cds-WP_223960453.1;Parent=gene-LDO45_RS05370;Dbxref=GenBank:WP_223960453.1;Name=WP_223960453.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372574.1;locus_tag=LDO45_RS05370;product=ATP-binding protein;protein_id=WP_223960453.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 28462 28782 . - . ID=gene-LDO45_RS05375;Name=LDO45_RS05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05375;old_locus_tag=BDI4_1200043 NZ_CAJZAS010000025.1 Protein Homology CDS 28462 28782 . - 0 ID=cds-WP_063552892.1;Parent=gene-LDO45_RS05375;Dbxref=GenBank:WP_063552892.1;Name=WP_063552892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349774.1;locus_tag=LDO45_RS05375;product=hypothetical protein;protein_id=WP_063552892.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 28933 29547 . + . ID=gene-LDO45_RS05380;Name=LDO45_RS05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05380;old_locus_tag=BDI4_1200044 NZ_CAJZAS010000025.1 Protein Homology CDS 28933 29547 . + 0 ID=cds-WP_223960455.1;Parent=gene-LDO45_RS05380;Dbxref=GenBank:WP_223960455.1;Name=WP_223960455.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725761.1;locus_tag=LDO45_RS05380;product=class I SAM-dependent methyltransferase;protein_id=WP_223960455.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 29788 32199 . + . ID=gene-LDO45_RS05385;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=LDO45_RS05385;old_locus_tag=BDI4_1200045 NZ_CAJZAS010000025.1 Protein Homology CDS 29788 32199 . + 0 ID=cds-WP_223960457.1;Parent=gene-LDO45_RS05385;Dbxref=GenBank:WP_223960457.1;Name=WP_223960457.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218285.1;locus_tag=LDO45_RS05385;product=phosphoenolpyruvate synthase;protein_id=WP_223960457.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 32251 33465 . - . ID=gene-LDO45_RS05390;Name=phaZ;gbkey=Gene;gene=phaZ;gene_biotype=protein_coding;locus_tag=LDO45_RS05390;old_locus_tag=BDI4_1200046 NZ_CAJZAS010000025.1 Protein Homology CDS 32251 33465 . - 0 ID=cds-WP_223960459.1;Parent=gene-LDO45_RS05390;Dbxref=GenBank:WP_223960459.1;Name=WP_223960459.1;gbkey=CDS;gene=phaZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218284.1;locus_tag=LDO45_RS05390;product=polyhydroxyalkanoate depolymerase;protein_id=WP_223960459.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 33611 34132 . + . ID=gene-LDO45_RS05395;Name=LDO45_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05395;old_locus_tag=BDI4_1200047 NZ_CAJZAS010000025.1 Protein Homology CDS 33611 34132 . + 0 ID=cds-WP_223960461.1;Parent=gene-LDO45_RS05395;Dbxref=GenBank:WP_223960461.1;Name=WP_223960461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218283.1;locus_tag=LDO45_RS05395;product=flavodoxin domain-containing protein;protein_id=WP_223960461.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 34583 34990 . + . ID=gene-LDO45_RS05400;Name=LDO45_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05400;old_locus_tag=BDI4_1200048 NZ_CAJZAS010000025.1 Protein Homology CDS 34583 34990 . + 0 ID=cds-WP_223960463.1;Parent=gene-LDO45_RS05400;Dbxref=GenBank:WP_223960463.1;Name=WP_223960463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218278.1;locus_tag=LDO45_RS05400;product=hypothetical protein;protein_id=WP_223960463.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 35063 35245 . + . ID=gene-LDO45_RS05405;Name=LDO45_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05405;old_locus_tag=BDI4_1200049 NZ_CAJZAS010000025.1 Protein Homology CDS 35063 35245 . + 0 ID=cds-WP_223960465.1;Parent=gene-LDO45_RS05405;Dbxref=GenBank:WP_223960465.1;Name=WP_223960465.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016836.5;locus_tag=LDO45_RS05405;product=BON domain-containing protein;protein_id=WP_223960465.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 35307 35756 . + . ID=gene-LDO45_RS05410;Name=LDO45_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05410;old_locus_tag=BDI4_1200050 NZ_CAJZAS010000025.1 Protein Homology CDS 35307 35756 . + 0 ID=cds-WP_059536698.1;Parent=gene-LDO45_RS05410;Dbxref=GenBank:WP_059536698.1;Name=WP_059536698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372500.1;locus_tag=LDO45_RS05410;product=CBS domain-containing protein;protein_id=WP_059536698.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 35847 36356 . + . ID=gene-LDO45_RS05415;Name=LDO45_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05415;old_locus_tag=BDI4_1200051 NZ_CAJZAS010000025.1 Protein Homology CDS 35847 36356 . + 0 ID=cds-WP_223960467.1;Parent=gene-LDO45_RS05415;Dbxref=GenBank:WP_223960467.1;Name=WP_223960467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012464859.1;locus_tag=LDO45_RS05415;product=hypothetical protein;protein_id=WP_223960467.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 36340 36579 . + . ID=gene-LDO45_RS05420;Name=LDO45_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05420 NZ_CAJZAS010000025.1 Protein Homology CDS 36340 36579 . + 0 ID=cds-WP_059452422.1;Parent=gene-LDO45_RS05420;Dbxref=GenBank:WP_059452422.1;Name=WP_059452422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012464860.1;locus_tag=LDO45_RS05420;product=hypothetical protein;protein_id=WP_059452422.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 36761 37216 . + . ID=gene-LDO45_RS05425;Name=LDO45_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05425;old_locus_tag=BDI4_1200053 NZ_CAJZAS010000025.1 Protein Homology CDS 36761 37216 . + 0 ID=cds-WP_223960469.1;Parent=gene-LDO45_RS05425;Dbxref=GenBank:WP_223960469.1;Name=WP_223960469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012464861.1;locus_tag=LDO45_RS05425;product=hypothetical protein;protein_id=WP_223960469.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 37296 38672 . + . ID=gene-LDO45_RS05430;Name=LDO45_RS05430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05430;old_locus_tag=BDI4_1200054 NZ_CAJZAS010000025.1 Protein Homology CDS 37296 38672 . + 0 ID=cds-WP_223960533.1;Parent=gene-LDO45_RS05430;Dbxref=GenBank:WP_223960533.1;Name=WP_223960533.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012464862.1;locus_tag=LDO45_RS05430;product=nicotinate phosphoribosyltransferase;protein_id=WP_223960533.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 38669 38848 . + . ID=gene-LDO45_RS05435;Name=LDO45_RS05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05435;old_locus_tag=BDI4_1200055 NZ_CAJZAS010000025.1 GeneMarkS-2+ CDS 38669 38848 . + 0 ID=cds-WP_223960471.1;Parent=gene-LDO45_RS05435;Dbxref=GenBank:WP_223960471.1;Name=WP_223960471.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS05435;product=hypothetical protein;protein_id=WP_223960471.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 38845 39804 . + . ID=gene-LDO45_RS05440;Name=LDO45_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05440;old_locus_tag=BDI4_1200056 NZ_CAJZAS010000025.1 Protein Homology CDS 38845 39804 . + 0 ID=cds-WP_223960473.1;Parent=gene-LDO45_RS05440;Dbxref=GenBank:WP_223960473.1;Name=WP_223960473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218269.1;locus_tag=LDO45_RS05440;product=acetyltransferase;protein_id=WP_223960473.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 40003 41736 . + . ID=gene-LDO45_RS05445;Name=LDO45_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05445;old_locus_tag=BDI4_1200058 NZ_CAJZAS010000025.1 Protein Homology CDS 40003 41736 . + 0 ID=cds-WP_223960475.1;Parent=gene-LDO45_RS05445;Dbxref=GenBank:WP_223960475.1;Name=WP_223960475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004540996.1;locus_tag=LDO45_RS05445;product=ABC transporter permease subunit;protein_id=WP_223960475.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 41856 43115 . + . ID=gene-LDO45_RS05450;Name=LDO45_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05450;old_locus_tag=BDI4_1200057 NZ_CAJZAS010000025.1 Protein Homology CDS 41856 43115 . + 0 ID=cds-WP_223960535.1;Parent=gene-LDO45_RS05450;Dbxref=GenBank:WP_223960535.1;Name=WP_223960535.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004537895.1;locus_tag=LDO45_RS05450;product=nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein;protein_id=WP_223960535.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 43269 43733 . + . ID=gene-LDO45_RS05455;Name=LDO45_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05455;old_locus_tag=BDI4_1200060 NZ_CAJZAS010000025.1 Protein Homology CDS 43269 43733 . + 0 ID=cds-WP_059452427.1;Parent=gene-LDO45_RS05455;Dbxref=GenBank:WP_059452427.1;Name=WP_059452427.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880414.1;locus_tag=LDO45_RS05455;product=hypothetical protein;protein_id=WP_059452427.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 43930 44379 . + . ID=gene-LDO45_RS05460;Name=LDO45_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05460;old_locus_tag=BDI4_1200061 NZ_CAJZAS010000025.1 Protein Homology CDS 43930 44379 . + 0 ID=cds-WP_059452515.1;Parent=gene-LDO45_RS05460;Dbxref=GenBank:WP_059452515.1;Name=WP_059452515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009896286.1;locus_tag=LDO45_RS05460;product=CBS domain-containing protein;protein_id=WP_059452515.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 44441 46045 . - . ID=gene-LDO45_RS05465;Name=LDO45_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05465;old_locus_tag=BDI4_1200063 NZ_CAJZAS010000025.1 Protein Homology CDS 44441 46045 . - 0 ID=cds-WP_374109511.1;Parent=gene-LDO45_RS05465;Dbxref=GenBank:WP_374109511.1;Name=WP_374109511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218264.1;locus_tag=LDO45_RS05465;product=AAA family ATPase;protein_id=WP_374109511.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 46365 46805 . + . ID=gene-LDO45_RS05470;Name=LDO45_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05470;old_locus_tag=BDI4_1200064 NZ_CAJZAS010000025.1 Protein Homology CDS 46365 46805 . + 0 ID=cds-WP_059701027.1;Parent=gene-LDO45_RS05470;Dbxref=GenBank:WP_059701027.1;Name=WP_059701027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218263.1;locus_tag=LDO45_RS05470;product=hypothetical protein;protein_id=WP_059701027.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 47010 47483 . + . ID=gene-LDO45_RS05475;Name=LDO45_RS05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05475;old_locus_tag=BDI4_1200065 NZ_CAJZAS010000025.1 Protein Homology CDS 47010 47483 . + 0 ID=cds-WP_059536668.1;Parent=gene-LDO45_RS05475;Dbxref=GenBank:WP_059536668.1;Name=WP_059536668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218262.1;locus_tag=LDO45_RS05475;product=universal stress protein;protein_id=WP_059536668.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 47515 47790 . + . ID=gene-LDO45_RS05480;Name=LDO45_RS05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05480 NZ_CAJZAS010000025.1 Protein Homology CDS 47515 47790 . + 0 ID=cds-WP_059452516.1;Parent=gene-LDO45_RS05480;Dbxref=GenBank:WP_059452516.1;Name=WP_059452516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415464.1;locus_tag=LDO45_RS05480;product=DUF1488 domain-containing protein;protein_id=WP_059452516.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 47968 48402 . + . ID=gene-LDO45_RS05485;Name=LDO45_RS05485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05485;old_locus_tag=BDI4_1200067 NZ_CAJZAS010000025.1 Protein Homology CDS 47968 48402 . + 0 ID=cds-WP_223960479.1;Parent=gene-LDO45_RS05485;Dbxref=GenBank:WP_223960479.1;Name=WP_223960479.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415428.1;locus_tag=LDO45_RS05485;product=Hsp20/alpha crystallin family protein;protein_id=WP_223960479.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 48508 49173 . - . ID=gene-LDO45_RS05490;Name=LDO45_RS05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05490;old_locus_tag=BDI4_1200068 NZ_CAJZAS010000025.1 Protein Homology CDS 48508 49173 . - 0 ID=cds-WP_059452432.1;Parent=gene-LDO45_RS05490;Dbxref=GenBank:WP_059452432.1;Name=WP_059452432.1;Ontology_term=GO:0016491,GO:0016657;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,obsolete oxidoreductase activity%2C acting on NAD(P)H%2C nitrogenous group as acceptor|0016657||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372511.1;locus_tag=LDO45_RS05490;product=nitroreductase family protein;protein_id=WP_059452432.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 49404 50054 . + . ID=gene-LDO45_RS05495;Name=LDO45_RS05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05495;old_locus_tag=BDI4_1200069 NZ_CAJZAS010000025.1 Protein Homology CDS 49404 50054 . + 0 ID=cds-WP_059452433.1;Parent=gene-LDO45_RS05495;Dbxref=GenBank:WP_059452433.1;Name=WP_059452433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603916.1;locus_tag=LDO45_RS05495;product=BON domain-containing protein;protein_id=WP_059452433.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 50103 50342 . + . ID=gene-LDO45_RS05500;Name=LDO45_RS05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05500;old_locus_tag=BDI4_1200070 NZ_CAJZAS010000025.1 Protein Homology CDS 50103 50342 . + 0 ID=cds-WP_059452434.1;Parent=gene-LDO45_RS05500;Dbxref=GenBank:WP_059452434.1;Name=WP_059452434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009690622.1;locus_tag=LDO45_RS05500;product=hypothetical protein;protein_id=WP_059452434.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 50433 52190 . - . ID=gene-LDO45_RS05505;Name=LDO45_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05505;old_locus_tag=BDI4_1200071 NZ_CAJZAS010000025.1 Protein Homology CDS 50433 52190 . - 0 ID=cds-WP_223960480.1;Parent=gene-LDO45_RS05505;Dbxref=GenBank:WP_223960480.1;Name=WP_223960480.1;Ontology_term=GO:0015103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=inorganic anion transmembrane transporter activity|0015103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488350.1;locus_tag=LDO45_RS05505;product=SulP family inorganic anion transporter;protein_id=WP_223960480.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 52355 52588 . - . ID=gene-LDO45_RS05510;Name=LDO45_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05510;old_locus_tag=BDI4_1200072 NZ_CAJZAS010000025.1 Protein Homology CDS 52355 52588 . - 0 ID=cds-WP_059816818.1;Parent=gene-LDO45_RS05510;Dbxref=GenBank:WP_059816818.1;Name=WP_059816818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488339.1;locus_tag=LDO45_RS05510;product=hypothetical protein;protein_id=WP_059816818.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 52729 53757 . - . ID=gene-LDO45_RS05515;Name=LDO45_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05515;old_locus_tag=BDI4_1200073 NZ_CAJZAS010000025.1 Protein Homology CDS 52729 53757 . - 0 ID=cds-WP_223960482.1;Parent=gene-LDO45_RS05515;Dbxref=GenBank:WP_223960482.1;Name=WP_223960482.1;Ontology_term=GO:0009691,GO:0016799;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218255.1;locus_tag=LDO45_RS05515;product=LOG family protein;protein_id=WP_223960482.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 53780 54115 . - . ID=gene-LDO45_RS05520;Name=LDO45_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05520;old_locus_tag=BDI4_1200074 NZ_CAJZAS010000025.1 Protein Homology CDS 53780 54115 . - 0 ID=cds-WP_059536646.1;Parent=gene-LDO45_RS05520;Dbxref=GenBank:WP_059536646.1;Name=WP_059536646.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726033.1;locus_tag=LDO45_RS05520;product=c-type cytochrome;protein_id=WP_059536646.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 54135 55142 . - . ID=gene-LDO45_RS05525;Name=LDO45_RS05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05525;old_locus_tag=BDI4_1200075 NZ_CAJZAS010000025.1 Protein Homology CDS 54135 55142 . - 0 ID=cds-WP_223960484.1;Parent=gene-LDO45_RS05525;Dbxref=GenBank:WP_223960484.1;Name=WP_223960484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488462.1;locus_tag=LDO45_RS05525;product=nitroreductase family protein;protein_id=WP_223960484.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 55315 56304 . + . ID=gene-LDO45_RS05530;Name=LDO45_RS05530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05530;old_locus_tag=BDI4_1200076 NZ_CAJZAS010000025.1 Protein Homology CDS 55315 56304 . + 0 ID=cds-WP_059452440.1;Parent=gene-LDO45_RS05530;Dbxref=GenBank:WP_059452440.1;Name=WP_059452440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752861.1;locus_tag=LDO45_RS05530;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_059452440.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 56330 57103 . - . ID=gene-LDO45_RS05535;Name=fnr;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=LDO45_RS05535;old_locus_tag=BDI4_1200077 NZ_CAJZAS010000025.1 Protein Homology CDS 56330 57103 . - 0 ID=cds-WP_223960486.1;Parent=gene-LDO45_RS05535;Dbxref=GenBank:WP_223960486.1;Name=WP_223960486.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=fnr;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488370.1;locus_tag=LDO45_RS05535;product=fumarate/nitrate reduction transcriptional regulator Fnr;protein_id=WP_223960486.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 57527 58174 . - . ID=gene-LDO45_RS05540;Name=LDO45_RS05540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05540;old_locus_tag=BDI4_1200078 NZ_CAJZAS010000025.1 Protein Homology CDS 57527 58174 . - 0 ID=cds-WP_223960488.1;Parent=gene-LDO45_RS05540;Dbxref=GenBank:WP_223960488.1;Name=WP_223960488.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415450.1;locus_tag=LDO45_RS05540;product=response regulator transcription factor;protein_id=WP_223960488.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 58171 60165 . - . ID=gene-LDO45_RS05545;Name=LDO45_RS05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05545;old_locus_tag=BDI4_1200079 NZ_CAJZAS010000025.1 Protein Homology CDS 58171 60165 . - 0 ID=cds-WP_223960490.1;Parent=gene-LDO45_RS05545;Dbxref=GenBank:WP_223960490.1;Name=WP_223960490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488404.1;locus_tag=LDO45_RS05545;product=PAS domain S-box protein;protein_id=WP_223960490.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 60413 60883 . + . ID=gene-LDO45_RS05550;Name=LDO45_RS05550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05550;old_locus_tag=BDI4_1200080 NZ_CAJZAS010000025.1 Protein Homology CDS 60413 60883 . + 0 ID=cds-WP_059452444.1;Parent=gene-LDO45_RS05550;Dbxref=GenBank:WP_059452444.1;Name=WP_059452444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726027.1;locus_tag=LDO45_RS05550;product=universal stress protein;protein_id=WP_059452444.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 60934 61767 . - . ID=gene-LDO45_RS05555;Name=LDO45_RS05555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05555;old_locus_tag=BDI4_1200081 NZ_CAJZAS010000025.1 Protein Homology CDS 60934 61767 . - 0 ID=cds-WP_223960492.1;Parent=gene-LDO45_RS05555;Dbxref=GenBank:WP_223960492.1;Name=WP_223960492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880393.1;locus_tag=LDO45_RS05555;product=universal stress protein;protein_id=WP_223960492.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 61764 62267 . - . ID=gene-LDO45_RS05560;Name=LDO45_RS05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05560;old_locus_tag=BDI4_1200082 NZ_CAJZAS010000025.1 Protein Homology CDS 61764 62267 . - 0 ID=cds-WP_223960494.1;Parent=gene-LDO45_RS05560;Dbxref=GenBank:WP_223960494.1;Name=WP_223960494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218247.1;locus_tag=LDO45_RS05560;product=universal stress protein;protein_id=WP_223960494.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 62337 63539 . - . ID=gene-LDO45_RS05565;Name=LDO45_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05565;old_locus_tag=BDI4_1200083 NZ_CAJZAS010000025.1 Protein Homology CDS 62337 63539 . - 0 ID=cds-WP_223960496.1;Parent=gene-LDO45_RS05565;Dbxref=GenBank:WP_223960496.1;Name=WP_223960496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658823.1;locus_tag=LDO45_RS05565;product=acetate/propionate family kinase;protein_id=WP_223960496.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 63548 64387 . - . ID=gene-LDO45_RS05570;Name=LDO45_RS05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05570;old_locus_tag=BDI4_1200084 NZ_CAJZAS010000025.1 Protein Homology CDS 63548 64387 . - 0 ID=cds-WP_223960498.1;Parent=gene-LDO45_RS05570;Dbxref=GenBank:WP_223960498.1;Name=WP_223960498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009968117.1;locus_tag=LDO45_RS05570;product=universal stress protein;protein_id=WP_223960498.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 64578 65108 . + . ID=gene-LDO45_RS05575;Name=LDO45_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05575;old_locus_tag=BDI4_1200085 NZ_CAJZAS010000025.1 Protein Homology CDS 64578 65108 . + 0 ID=cds-WP_059452448.1;Parent=gene-LDO45_RS05575;Dbxref=GenBank:WP_059452448.1;Name=WP_059452448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752854.1;locus_tag=LDO45_RS05575;product=hypothetical protein;protein_id=WP_059452448.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 65098 65844 . + . ID=gene-LDO45_RS05580;Name=LDO45_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05580;old_locus_tag=BDI4_1200086 NZ_CAJZAS010000025.1 Protein Homology CDS 65098 65844 . + 0 ID=cds-WP_175916251.1;Parent=gene-LDO45_RS05580;Dbxref=GenBank:WP_175916251.1;Name=WP_175916251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752853.1;locus_tag=LDO45_RS05580;product=beta-ketoacyl-ACP reductase;protein_id=WP_175916251.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 65841 67679 . + . ID=gene-LDO45_RS05585;Name=LDO45_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05585;old_locus_tag=BDI4_1200087 NZ_CAJZAS010000025.1 Protein Homology CDS 65841 67679 . + 0 ID=cds-WP_223960500.1;Parent=gene-LDO45_RS05585;Dbxref=GenBank:WP_223960500.1;Name=WP_223960500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366073.1;locus_tag=LDO45_RS05585;product=alpha/beta hydrolase;protein_id=WP_223960500.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 67676 68707 . + . ID=gene-LDO45_RS05590;Name=LDO45_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05590;old_locus_tag=BDI4_1200088 NZ_CAJZAS010000025.1 Protein Homology CDS 67676 68707 . + 0 ID=cds-WP_223960502.1;Parent=gene-LDO45_RS05590;Dbxref=GenBank:WP_223960502.1;Name=WP_223960502.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488262.1;locus_tag=LDO45_RS05590;product=bifunctional enoyl-CoA hydratase/phosphate acetyltransferase;protein_id=WP_223960502.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 68704 69744 . + . ID=gene-LDO45_RS05595;Name=LDO45_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05595;old_locus_tag=BDI4_1200089 NZ_CAJZAS010000025.1 Protein Homology CDS 68704 69744 . + 0 ID=cds-WP_223960504.1;Parent=gene-LDO45_RS05595;Dbxref=GenBank:WP_223960504.1;Name=WP_223960504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415445.1;locus_tag=LDO45_RS05595;product=zinc-dependent alcohol dehydrogenase family protein;protein_id=WP_223960504.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 69828 71231 . - . ID=gene-LDO45_RS05600;Name=LDO45_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05600;old_locus_tag=BDI4_1200090 NZ_CAJZAS010000025.1 Protein Homology CDS 69828 71231 . - 0 ID=cds-WP_223960506.1;Parent=gene-LDO45_RS05600;Dbxref=GenBank:WP_223960506.1;Name=WP_223960506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415440.1;locus_tag=LDO45_RS05600;product=MBL fold metallo-hydrolase RNA specificity domain-containing protein;protein_id=WP_223960506.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 71498 71947 . + . ID=gene-LDO45_RS05605;Name=LDO45_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05605;old_locus_tag=BDI4_1200091 NZ_CAJZAS010000025.1 Protein Homology CDS 71498 71947 . + 0 ID=cds-WP_059452454.1;Parent=gene-LDO45_RS05605;Dbxref=GenBank:WP_059452454.1;Name=WP_059452454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415447.1;locus_tag=LDO45_RS05605;product=hypothetical protein;protein_id=WP_059452454.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 71989 73479 . - . ID=gene-LDO45_RS05610;Name=LDO45_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05610;old_locus_tag=BDI4_1200092 NZ_CAJZAS010000025.1 Protein Homology CDS 71989 73479 . - 0 ID=cds-WP_223960508.1;Parent=gene-LDO45_RS05610;Dbxref=GenBank:WP_223960508.1;Name=WP_223960508.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218241.1;locus_tag=LDO45_RS05610;product=efflux transporter outer membrane subunit;protein_id=WP_223960508.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 73457 74542 . - . ID=gene-LDO45_RS05615;Name=LDO45_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05615;old_locus_tag=BDI4_1200093 NZ_CAJZAS010000025.1 Protein Homology CDS 73457 74542 . - 0 ID=cds-WP_223960510.1;Parent=gene-LDO45_RS05615;Dbxref=GenBank:WP_223960510.1;Name=WP_223960510.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415444.1;locus_tag=LDO45_RS05615;product=HlyD family secretion protein;protein_id=WP_223960510.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 74539 75243 . - . ID=gene-LDO45_RS05620;Name=LDO45_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05620;old_locus_tag=BDI4_1200094 NZ_CAJZAS010000025.1 Protein Homology CDS 74539 75243 . - 0 ID=cds-WP_223960537.1;Parent=gene-LDO45_RS05620;Dbxref=GenBank:WP_223960537.1;Name=WP_223960537.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415426.1;locus_tag=LDO45_RS05620;product=ABC transporter ATP-binding protein;protein_id=WP_223960537.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 75240 76376 . - . ID=gene-LDO45_RS05625;Name=LDO45_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05625;old_locus_tag=BDI4_1200095 NZ_CAJZAS010000025.1 Protein Homology CDS 75240 76376 . - 0 ID=cds-WP_059452458.1;Parent=gene-LDO45_RS05625;Dbxref=GenBank:WP_059452458.1;Name=WP_059452458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853754.1;locus_tag=LDO45_RS05625;product=FtsX-like permease family protein;protein_id=WP_059452458.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 76409 76594 . - . ID=gene-LDO45_RS05630;Name=LDO45_RS05630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05630;old_locus_tag=BDI4_1200096 NZ_CAJZAS010000025.1 Protein Homology CDS 76409 76594 . - 0 ID=cds-WP_223960512.1;Parent=gene-LDO45_RS05630;Dbxref=GenBank:WP_223960512.1;Name=WP_223960512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880377.1;locus_tag=LDO45_RS05630;product=DUF2964 family protein;protein_id=WP_223960512.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 76736 77860 . - . ID=gene-LDO45_RS05635;Name=LDO45_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05635;old_locus_tag=BDI4_1200097 NZ_CAJZAS010000025.1 Protein Homology CDS 76736 77860 . - 0 ID=cds-WP_223960514.1;Parent=gene-LDO45_RS05635;Dbxref=GenBank:WP_223960514.1;Name=WP_223960514.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488436.1;locus_tag=LDO45_RS05635;product=ABC transporter permease;protein_id=WP_223960514.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 77863 80682 . - . ID=gene-LDO45_RS05640;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=LDO45_RS05640;old_locus_tag=BDI4_1200098 NZ_CAJZAS010000025.1 Protein Homology CDS 77863 80682 . - 0 ID=cds-WP_290370997.1;Parent=gene-LDO45_RS05640;Dbxref=GenBank:WP_290370997.1;Name=WP_290370997.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726013.1;locus_tag=LDO45_RS05640;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_290370997.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 80679 81752 . - . ID=gene-LDO45_RS05645;Name=LDO45_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05645;old_locus_tag=BDI4_1200099 NZ_CAJZAS010000025.1 Protein Homology CDS 80679 81752 . - 0 ID=cds-WP_059693100.1;Parent=gene-LDO45_RS05645;Dbxref=GenBank:WP_059693100.1;Name=WP_059693100.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880374.1;locus_tag=LDO45_RS05645;product=HlyD family secretion protein;protein_id=WP_059693100.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 81749 83242 . - . ID=gene-LDO45_RS05650;Name=LDO45_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05650;old_locus_tag=BDI4_1200100 NZ_CAJZAS010000025.1 Protein Homology CDS 81749 83242 . - 0 ID=cds-WP_374109512.1;Parent=gene-LDO45_RS05650;Dbxref=GenBank:WP_374109512.1;Name=WP_374109512.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488330.1;locus_tag=LDO45_RS05650;product=efflux transporter outer membrane subunit;protein_id=WP_374109512.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 83466 83654 . - . ID=gene-LDO45_RS05655;Name=LDO45_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05655;old_locus_tag=BDI4_1200101 NZ_CAJZAS010000025.1 Protein Homology CDS 83466 83654 . - 0 ID=cds-WP_223960518.1;Parent=gene-LDO45_RS05655;Dbxref=GenBank:WP_223960518.1;Name=WP_223960518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488308.1;locus_tag=LDO45_RS05655;product=DUF2964 family protein;protein_id=WP_223960518.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 83944 84591 . + . ID=gene-LDO45_RS05660;Name=LDO45_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05660;old_locus_tag=BDI4_1200102 NZ_CAJZAS010000025.1 Protein Homology CDS 83944 84591 . + 0 ID=cds-WP_059537371.1;Parent=gene-LDO45_RS05660;Dbxref=GenBank:WP_059537371.1;Name=WP_059537371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880371.1;locus_tag=LDO45_RS05660;product=BON domain-containing protein;protein_id=WP_059537371.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 84631 85140 . + . ID=gene-LDO45_RS05665;Name=LDO45_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05665;old_locus_tag=BDI4_1200103 NZ_CAJZAS010000025.1 Protein Homology CDS 84631 85140 . + 0 ID=cds-WP_223960520.1;Parent=gene-LDO45_RS05665;Dbxref=GenBank:WP_223960520.1;Name=WP_223960520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218232.1;locus_tag=LDO45_RS05665;product=BCAM0308 family protein;protein_id=WP_223960520.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 85173 87080 . + . ID=gene-LDO45_RS05670;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=LDO45_RS05670;old_locus_tag=BDI4_1200104 NZ_CAJZAS010000025.1 Protein Homology CDS 85173 87080 . + 0 ID=cds-WP_223960523.1;Parent=gene-LDO45_RS05670;Dbxref=GenBank:WP_223960523.1;Name=WP_223960523.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218231.1;locus_tag=LDO45_RS05670;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_223960523.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 87133 88929 . - . ID=gene-LDO45_RS05675;Name=LDO45_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05675;old_locus_tag=BDI4_1200105 NZ_CAJZAS010000025.1 Protein Homology CDS 87133 88929 . - 0 ID=cds-WP_223960525.1;Parent=gene-LDO45_RS05675;Dbxref=GenBank:WP_223960525.1;Name=WP_223960525.1;Ontology_term=GO:0000166,GO:0004748,GO:0031419;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488453.1;locus_tag=LDO45_RS05675;product=adenosylcobalamin-dependent ribonucleoside-diphosphate reductase;protein_id=WP_223960525.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 89145 90080 . + . ID=gene-LDO45_RS05680;Name=LDO45_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05680;old_locus_tag=BDI4_1200106 NZ_CAJZAS010000025.1 Protein Homology CDS 89145 90080 . + 0 ID=cds-WP_059536547.1;Parent=gene-LDO45_RS05680;Dbxref=GenBank:WP_059536547.1;Name=WP_059536547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372536.1;locus_tag=LDO45_RS05680;product=1-phosphofructokinase family hexose kinase;protein_id=WP_059536547.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 90199 90990 . + . ID=gene-LDO45_RS05685;Name=LDO45_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05685;old_locus_tag=BDI4_1200107 NZ_CAJZAS010000025.1 Protein Homology CDS 90199 90990 . + 0 ID=cds-WP_223960541.1;Parent=gene-LDO45_RS05685;Dbxref=GenBank:WP_223960541.1;Name=WP_223960541.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488471.1;locus_tag=LDO45_RS05685;product=polysaccharide deacetylase family protein;protein_id=WP_223960541.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 90987 92252 . + . ID=gene-LDO45_RS05690;Name=LDO45_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05690;old_locus_tag=BDI4_1200108 NZ_CAJZAS010000025.1 Protein Homology CDS 90987 92252 . + 0 ID=cds-WP_223960527.1;Parent=gene-LDO45_RS05690;Dbxref=GenBank:WP_223960527.1;Name=WP_223960527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372538.1;locus_tag=LDO45_RS05690;product=putative glycoside hydrolase;protein_id=WP_223960527.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 92298 92486 . + . ID=gene-LDO45_RS05695;Name=LDO45_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05695;old_locus_tag=BDI4_1200109 NZ_CAJZAS010000025.1 Protein Homology CDS 92298 92486 . + 0 ID=cds-WP_059536535.1;Parent=gene-LDO45_RS05695;Dbxref=GenBank:WP_059536535.1;Name=WP_059536535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011297331.1;locus_tag=LDO45_RS05695;product=hypothetical protein;protein_id=WP_059536535.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 92531 93028 . - . ID=gene-LDO45_RS05700;Name=LDO45_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05700;old_locus_tag=BDI4_1200110 NZ_CAJZAS010000025.1 Protein Homology CDS 92531 93028 . - 0 ID=cds-WP_223960543.1;Parent=gene-LDO45_RS05700;Dbxref=GenBank:WP_223960543.1;Name=WP_223960543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488275.1;locus_tag=LDO45_RS05700;product=lecithin retinol acyltransferase family protein;protein_id=WP_223960543.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq gene 93498 93962 . + . ID=gene-LDO45_RS05705;Name=LDO45_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05705;old_locus_tag=BDI4_1200111 NZ_CAJZAS010000025.1 Protein Homology CDS 93498 93962 . + 0 ID=cds-WP_223960529.1;Parent=gene-LDO45_RS05705;Dbxref=GenBank:WP_223960529.1;Name=WP_223960529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880362.1;locus_tag=LDO45_RS05705;product=carboxypeptidase-like regulatory domain-containing protein;protein_id=WP_223960529.1;transl_table=11 NZ_CAJZAS010000025.1 RefSeq pseudogene 94077 94902 . + . ID=gene-LDO45_RS05710;Name=LDO45_RS05710;end_range=94902,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS05710;old_locus_tag=BDI4_1200112;partial=true;pseudo=true NZ_CAJZAS010000025.1 Protein Homology CDS 94077 94902 . + 0 ID=cds-LDO45_RS05710;Parent=gene-LDO45_RS05710;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing C-terminus;Ontology_term=GO:0016787;end_range=94902,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725999.1;locus_tag=LDO45_RS05710;partial=true;product=serine hydrolase domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000026.1 1 9229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000026.1 RefSeq region 1 9229 . + . ID=NZ_CAJZAS010000026.1:1..9229;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_121 NZ_CAJZAS010000026.1 RefSeq gene 1 1559 . - . ID=gene-LDO45_RS05715;Name=LDO45_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05715;partial=true;start_range=.,1 NZ_CAJZAS010000026.1 Protein Homology CDS 1 1559 . - 0 ID=cds-WP_223960547.1;Parent=gene-LDO45_RS05715;Dbxref=GenBank:WP_223960547.1;Name=WP_223960547.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213362.1;locus_tag=LDO45_RS05715;partial=true;product=condensation domain-containing protein;protein_id=WP_223960547.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000026.1 RefSeq pseudogene 1569 9229 . - . ID=gene-LDO45_RS05720;Name=LDO45_RS05720;end_range=9229,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS05720;old_locus_tag=BDI4_1210002;partial=true;pseudo=true NZ_CAJZAS010000026.1 Protein Homology CDS 1569 9229 . - 1 ID=cds-LDO45_RS05720;Parent=gene-LDO45_RS05720;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing N-terminus;end_range=9229,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006499075.1;locus_tag=LDO45_RS05720;partial=true;product=amino acid adenylation domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000027.1 1 20913 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000027.1 RefSeq region 1 20913 . + . ID=NZ_CAJZAS010000027.1:1..20913;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_122 NZ_CAJZAS010000027.1 RefSeq gene 1 724 . + . ID=gene-LDO45_RS05725;Name=sctQ;gbkey=Gene;gene=sctQ;gene_biotype=protein_coding;locus_tag=LDO45_RS05725;old_locus_tag=BDI4_1220001;partial=true;start_range=.,1 NZ_CAJZAS010000027.1 Protein Homology CDS 1 724 . + 1 ID=cds-WP_223960549.1;Parent=gene-LDO45_RS05725;Dbxref=GenBank:WP_223960549.1;Name=WP_223960549.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctQ;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408427.1;locus_tag=LDO45_RS05725;partial=true;product=type III secretion system cytoplasmic ring protein SctQ;protein_id=WP_223960549.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000027.1 RefSeq gene 728 1402 . + . ID=gene-LDO45_RS05730;Name=sctR;gbkey=Gene;gene=sctR;gene_biotype=protein_coding;locus_tag=LDO45_RS05730;old_locus_tag=BDI4_1220003 NZ_CAJZAS010000027.1 Protein Homology CDS 728 1402 . + 0 ID=cds-WP_044847619.1;Parent=gene-LDO45_RS05730;Dbxref=GenBank:WP_044847619.1;Name=WP_044847619.1;Ontology_term=GO:0015031,GO:0030254,GO:0016020,GO:0030257;gbkey=CDS;gene=sctR;go_component=membrane|0016020||IEA,type III protein secretion system complex|0030257||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415582.1;locus_tag=LDO45_RS05730;product=type III secretion system export apparatus subunit SctR;protein_id=WP_044847619.1;transl_table=11 NZ_CAJZAS010000027.1 RefSeq pseudogene 1399 2106 . + . ID=gene-LDO45_RS05735;Name=LDO45_RS05735;end_range=2106,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS05735;partial=true;pseudo=true NZ_CAJZAS010000027.1 Protein Homology CDS 1399 2106 . + 0 ID=cds-LDO45_RS05735;Parent=gene-LDO45_RS05735;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=2106,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882598.1;locus_tag=LDO45_RS05735;partial=true;product=lytic transglycosylase domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAS010000027.1 RefSeq pseudogene 2076 2468 . - . ID=gene-LDO45_RS05740;Name=LDO45_RS05740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS05740;old_locus_tag=BDI4_1220004;partial=true;pseudo=true;start_range=.,2076 NZ_CAJZAS010000027.1 Protein Homology CDS 2076 2468 . - 0 ID=cds-LDO45_RS05740;Parent=gene-LDO45_RS05740;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761231.1;locus_tag=LDO45_RS05740;partial=true;product=CHAD domain-containing protein;pseudo=true;start_range=.,2076;transl_table=11 NZ_CAJZAS010000027.1 RefSeq gene 2608 2991 . - . ID=gene-LDO45_RS05745;Name=LDO45_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05745;old_locus_tag=BDI4_1220005 NZ_CAJZAS010000027.1 Protein Homology CDS 2608 2991 . - 0 ID=cds-WP_059531531.1;Parent=gene-LDO45_RS05745;Dbxref=GenBank:WP_059531531.1;Name=WP_059531531.1;Ontology_term=GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479459.1;locus_tag=LDO45_RS05745;product=tautomerase family protein;protein_id=WP_059531531.1;transl_table=11 NZ_CAJZAS010000027.1 RefSeq gene 3100 3957 . + . ID=gene-LDO45_RS05750;Name=LDO45_RS05750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05750;old_locus_tag=BDI4_1220006 NZ_CAJZAS010000027.1 Protein Homology CDS 3100 3957 . + 0 ID=cds-WP_059689601.1;Parent=gene-LDO45_RS05750;Dbxref=GenBank:WP_059689601.1;Name=WP_059689601.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493188.1;locus_tag=LDO45_RS05750;product=LysR family transcriptional regulator;protein_id=WP_059689601.1;transl_table=11 NZ_CAJZAS010000027.1 RefSeq gene 3999 4922 . + . ID=gene-LDO45_RS05755;Name=LDO45_RS05755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05755;old_locus_tag=BDI4_1220007 NZ_CAJZAS010000027.1 Protein Homology CDS 3999 4922 . + 0 ID=cds-WP_059689599.1;Parent=gene-LDO45_RS05755;Dbxref=GenBank:WP_059689599.1;Name=WP_059689599.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410288.1;locus_tag=LDO45_RS05755;product=DMT family transporter;protein_id=WP_059689599.1;transl_table=11 NZ_CAJZAS010000027.1 RefSeq gene 4990 5769 . + . ID=gene-LDO45_RS05760;Name=LDO45_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05760;old_locus_tag=BDI4_1220008 NZ_CAJZAS010000027.1 Protein Homology CDS 4990 5769 . + 0 ID=cds-WP_059531540.1;Parent=gene-LDO45_RS05760;Dbxref=GenBank:WP_059531540.1;Name=WP_059531540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497274.1;locus_tag=LDO45_RS05760;product=sensor histidine kinase KdpD;protein_id=WP_059531540.1;transl_table=11 NZ_CAJZAS010000027.1 RefSeq gene 5845 7185 . + . ID=gene-LDO45_RS05765;Name=LDO45_RS05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05765;old_locus_tag=BDI4_1220009 NZ_CAJZAS010000027.1 Protein Homology CDS 5845 7185 . + 0 ID=cds-WP_059689595.1;Parent=gene-LDO45_RS05765;Dbxref=GenBank:WP_059689595.1;Name=WP_059689595.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004546848.1;locus_tag=LDO45_RS05765;product=hemolysin family protein;protein_id=WP_059689595.1;transl_table=11 NZ_CAJZAS010000027.1 RefSeq gene 7214 7798 . + . ID=gene-LDO45_RS05770;Name=LDO45_RS05770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05770;old_locus_tag=BDI4_1220010 NZ_CAJZAS010000027.1 Protein Homology CDS 7214 7798 . + 0 ID=cds-WP_223960551.1;Parent=gene-LDO45_RS05770;Dbxref=GenBank:WP_223960551.1;Name=WP_223960551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404154.1;locus_tag=LDO45_RS05770;product=thiamine phosphate synthase;protein_id=WP_223960551.1;transl_table=11 NZ_CAJZAS010000027.1 RefSeq gene 7838 9487 . - . ID=gene-LDO45_RS05775;Name=LDO45_RS05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05775;old_locus_tag=BDI4_1220011 NZ_CAJZAS010000027.1 Protein Homology CDS 7838 9487 . - 0 ID=cds-WP_059532380.1;Parent=gene-LDO45_RS05775;Dbxref=GenBank:WP_059532380.1;Name=WP_059532380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900049.1;locus_tag=LDO45_RS05775;product=DUF3459 domain-containing protein;protein_id=WP_059532380.1;transl_table=11 NZ_CAJZAS010000027.1 RefSeq gene 9790 10518 . + . ID=gene-LDO45_RS05780;Name=LDO45_RS05780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05780;old_locus_tag=BDI4_1220012 NZ_CAJZAS010000027.1 Protein Homology CDS 9790 10518 . + 0 ID=cds-WP_223960553.1;Parent=gene-LDO45_RS05780;Dbxref=GenBank:WP_223960553.1;Name=WP_223960553.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660478.1;locus_tag=LDO45_RS05780;product=class I SAM-dependent methyltransferase;protein_id=WP_223960553.1;transl_table=11 NZ_CAJZAS010000027.1 RefSeq gene 10555 11208 . - . ID=gene-LDO45_RS05785;Name=LDO45_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05785;old_locus_tag=BDI4_1220013 NZ_CAJZAS010000027.1 Protein Homology CDS 10555 11208 . - 0 ID=cds-WP_059699864.1;Parent=gene-LDO45_RS05785;Dbxref=GenBank:WP_059699864.1;Name=WP_059699864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660476.1;locus_tag=LDO45_RS05785;product=DUF1345 domain-containing protein;protein_id=WP_059699864.1;transl_table=11 NZ_CAJZAS010000027.1 RefSeq gene 11345 12070 . + . ID=gene-LDO45_RS05790;Name=LDO45_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05790;old_locus_tag=BDI4_1220014 NZ_CAJZAS010000027.1 Protein Homology CDS 11345 12070 . + 0 ID=cds-WP_175906545.1;Parent=gene-LDO45_RS05790;Dbxref=GenBank:WP_175906545.1;Name=WP_175906545.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900053.1;locus_tag=LDO45_RS05790;product=metallophosphoesterase;protein_id=WP_175906545.1;transl_table=11 NZ_CAJZAS010000027.1 RefSeq gene 12161 12859 . - . ID=gene-LDO45_RS05795;Name=LDO45_RS05795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05795;old_locus_tag=BDI4_1220015 NZ_CAJZAS010000027.1 Protein Homology CDS 12161 12859 . - 0 ID=cds-WP_059818752.1;Parent=gene-LDO45_RS05795;Dbxref=GenBank:WP_059818752.1;Name=WP_059818752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660474.1;locus_tag=LDO45_RS05795;product=RES family NAD+ phosphorylase;protein_id=WP_059818752.1;transl_table=11 NZ_CAJZAS010000027.1 RefSeq gene 12862 13281 . - . ID=gene-LDO45_RS05800;Name=LDO45_RS05800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05800;old_locus_tag=BDI4_1220016 NZ_CAJZAS010000027.1 Protein Homology CDS 12862 13281 . - 0 ID=cds-WP_059531557.1;Parent=gene-LDO45_RS05800;Dbxref=GenBank:WP_059531557.1;Name=WP_059531557.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009895626.1;locus_tag=LDO45_RS05800;product=MbcA/ParS/Xre antitoxin family protein;protein_id=WP_059531557.1;transl_table=11 NZ_CAJZAS010000027.1 RefSeq gene 13515 14297 . + . ID=gene-LDO45_RS05805;Name=LDO45_RS05805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05805;old_locus_tag=BDI4_1220017 NZ_CAJZAS010000027.1 Protein Homology CDS 13515 14297 . + 0 ID=cds-WP_059689542.1;Parent=gene-LDO45_RS05805;Dbxref=GenBank:WP_059689542.1;Name=WP_059689542.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090202.1;locus_tag=LDO45_RS05805;product=ABC transporter substrate-binding protein;protein_id=WP_059689542.1;transl_table=11 NZ_CAJZAS010000027.1 RefSeq gene 15276 16748 . - . ID=gene-LDO45_RS05810;Name=LDO45_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05810;old_locus_tag=BDI4_1220018 NZ_CAJZAS010000027.1 Protein Homology CDS 15276 16748 . - 0 ID=cds-WP_059531561.1;Parent=gene-LDO45_RS05810;Dbxref=GenBank:WP_059531561.1;Name=WP_059531561.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754051.1;locus_tag=LDO45_RS05810;product=sigma-54 dependent transcriptional regulator;protein_id=WP_059531561.1;transl_table=11 NZ_CAJZAS010000027.1 RefSeq gene 17187 18104 . - . ID=gene-LDO45_RS05815;Name=LDO45_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05815;old_locus_tag=BDI4_1220019 NZ_CAJZAS010000027.1 Protein Homology CDS 17187 18104 . - 0 ID=cds-WP_223960555.1;Parent=gene-LDO45_RS05815;Dbxref=GenBank:WP_223960555.1;Name=WP_223960555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479473.1;locus_tag=LDO45_RS05815;product=metal-dependent hydrolase;protein_id=WP_223960555.1;transl_table=11 NZ_CAJZAS010000027.1 RefSeq gene 18687 19028 . + . ID=gene-LDO45_RS05820;Name=LDO45_RS05820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05820;old_locus_tag=BDI4_1220021 NZ_CAJZAS010000027.1 Protein Homology CDS 18687 19028 . + 0 ID=cds-WP_059531564.1;Parent=gene-LDO45_RS05820;Dbxref=GenBank:WP_059531564.1;Name=WP_059531564.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754049.1;locus_tag=LDO45_RS05820;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_059531564.1;transl_table=11 NZ_CAJZAS010000027.1 RefSeq gene 19055 19822 . + . ID=gene-LDO45_RS05825;Name=LDO45_RS05825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05825;old_locus_tag=BDI4_1220020 NZ_CAJZAS010000027.1 Protein Homology CDS 19055 19822 . + 0 ID=cds-WP_223960558.1;Parent=gene-LDO45_RS05825;Dbxref=GenBank:WP_223960558.1;Name=WP_223960558.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009895622.1;locus_tag=LDO45_RS05825;product=AraC family transcriptional regulator;protein_id=WP_223960558.1;transl_table=11 NZ_CAJZAS010000027.1 RefSeq gene 19827 20297 . - . ID=gene-LDO45_RS05830;Name=LDO45_RS05830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05830;old_locus_tag=BDI4_1220022 NZ_CAJZAS010000027.1 Protein Homology CDS 19827 20297 . - 0 ID=cds-WP_059532386.1;Parent=gene-LDO45_RS05830;Dbxref=GenBank:WP_059532386.1;Name=WP_059532386.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355858.1;locus_tag=LDO45_RS05830;product=helix-turn-helix domain-containing protein;protein_id=WP_059532386.1;transl_table=11 NZ_CAJZAS010000027.1 RefSeq gene 20454 20913 . + . ID=gene-LDO45_RS05835;Name=LDO45_RS05835;end_range=20913,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05835;partial=true NZ_CAJZAS010000027.1 Protein Homology CDS 20454 20913 . + 0 ID=cds-WP_223960560.1;Parent=gene-LDO45_RS05835;Dbxref=GenBank:WP_223960560.1;Name=WP_223960560.1;Ontology_term=GO:0055085,GO:0022857;end_range=20913,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493180.1;locus_tag=LDO45_RS05835;partial=true;product=MFS transporter;protein_id=WP_223960560.1;transl_table=11 ##sequence-region NZ_CAJZAS010000028.1 1 747 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000028.1 RefSeq region 1 747 . + . ID=NZ_CAJZAS010000028.1:1..747;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_123 NZ_CAJZAS010000028.1 RefSeq pseudogene 1 270 . - . ID=gene-LDO45_RS05840;Name=LDO45_RS05840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS05840;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000028.1 Protein Homology CDS 1 270 . - 0 ID=cds-LDO45_RS05840;Parent=gene-LDO45_RS05840;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655738.1;locus_tag=LDO45_RS05840;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAS010000029.1 1 13860 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000029.1 RefSeq region 1 13860 . + . ID=NZ_CAJZAS010000029.1:1..13860;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_124 NZ_CAJZAS010000029.1 RefSeq gene 202 1142 . - . ID=gene-LDO45_RS05845;Name=LDO45_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05845;old_locus_tag=BDI4_1240002;partial=true;start_range=.,202 NZ_CAJZAS010000029.1 Protein Homology CDS 202 1142 . - 0 ID=cds-WP_223960562.1;Parent=gene-LDO45_RS05845;Dbxref=GenBank:WP_223960562.1;Name=WP_223960562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008921302.1;locus_tag=LDO45_RS05845;partial=true;product=hypothetical protein;protein_id=WP_223960562.1;start_range=.,202;transl_table=11 NZ_CAJZAS010000029.1 RefSeq pseudogene 1277 1494 . + . ID=gene-LDO45_RS05850;Name=LDO45_RS05850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS05850;old_locus_tag=BDI4_1240003;partial=true;pseudo=true;start_range=.,1277 NZ_CAJZAS010000029.1 Protein Homology CDS 1277 1494 . + 0 ID=cds-LDO45_RS05850;Parent=gene-LDO45_RS05850;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014253371.1;locus_tag=LDO45_RS05850;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1277;transl_table=11 NZ_CAJZAS010000029.1 RefSeq gene 1638 2582 . - . ID=gene-LDO45_RS05855;Name=LDO45_RS05855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05855;old_locus_tag=BDI4_1240004 NZ_CAJZAS010000029.1 Protein Homology CDS 1638 2582 . - 0 ID=cds-WP_223960564.1;Parent=gene-LDO45_RS05855;Dbxref=GenBank:WP_223960564.1;Name=WP_223960564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699799.1;locus_tag=LDO45_RS05855;product=replication protein RepA;protein_id=WP_223960564.1;transl_table=11 NZ_CAJZAS010000029.1 RefSeq gene 3454 4509 . - . ID=gene-LDO45_RS05860;Name=LDO45_RS05860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05860;old_locus_tag=BDI4_1240006 NZ_CAJZAS010000029.1 Protein Homology CDS 3454 4509 . - 0 ID=cds-WP_223960566.1;Parent=gene-LDO45_RS05860;Dbxref=GenBank:WP_223960566.1;Name=WP_223960566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732802.1;locus_tag=LDO45_RS05860;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_223960566.1;transl_table=11 NZ_CAJZAS010000029.1 RefSeq gene 4506 5186 . - . ID=gene-LDO45_RS05865;Name=parA;gbkey=Gene;gene=parA;gene_biotype=protein_coding;locus_tag=LDO45_RS05865;old_locus_tag=BDI4_1240007 NZ_CAJZAS010000029.1 Protein Homology CDS 4506 5186 . - 0 ID=cds-WP_223960568.1;Parent=gene-LDO45_RS05865;Dbxref=GenBank:WP_223960568.1;Name=WP_223960568.1;gbkey=CDS;gene=parA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699971.1;locus_tag=LDO45_RS05865;product=ParA family partition ATPase;protein_id=WP_223960568.1;transl_table=11 NZ_CAJZAS010000029.1 RefSeq gene 5801 6379 . + . ID=gene-LDO45_RS05870;Name=LDO45_RS05870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05870;old_locus_tag=BDI4_1240009 NZ_CAJZAS010000029.1 GeneMarkS-2+ CDS 5801 6379 . + 0 ID=cds-WP_223960570.1;Parent=gene-LDO45_RS05870;Dbxref=GenBank:WP_223960570.1;Name=WP_223960570.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS05870;product=hypothetical protein;protein_id=WP_223960570.1;transl_table=11 NZ_CAJZAS010000029.1 RefSeq gene 6570 6812 . + . ID=gene-LDO45_RS05875;Name=LDO45_RS05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05875;old_locus_tag=BDI4_1240010 NZ_CAJZAS010000029.1 Protein Homology CDS 6570 6812 . + 0 ID=cds-WP_059512487.1;Parent=gene-LDO45_RS05875;Dbxref=GenBank:WP_059512487.1;Name=WP_059512487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009692911.1;locus_tag=LDO45_RS05875;product=antitoxin;protein_id=WP_059512487.1;transl_table=11 NZ_CAJZAS010000029.1 RefSeq gene 6809 7219 . + . ID=gene-LDO45_RS05880;Name=LDO45_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05880;old_locus_tag=BDI4_1240011 NZ_CAJZAS010000029.1 Protein Homology CDS 6809 7219 . + 0 ID=cds-WP_223960571.1;Parent=gene-LDO45_RS05880;Dbxref=GenBank:WP_223960571.1;Name=WP_223960571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029599.1;locus_tag=LDO45_RS05880;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_223960571.1;transl_table=11 NZ_CAJZAS010000029.1 RefSeq gene 7546 8259 . + . ID=gene-LDO45_RS05885;Name=LDO45_RS05885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05885;old_locus_tag=BDI4_1240012 NZ_CAJZAS010000029.1 GeneMarkS-2+ CDS 7546 8259 . + 0 ID=cds-WP_223960573.1;Parent=gene-LDO45_RS05885;Dbxref=GenBank:WP_223960573.1;Name=WP_223960573.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS05885;product=hypothetical protein;protein_id=WP_223960573.1;transl_table=11 NZ_CAJZAS010000029.1 RefSeq gene 8261 10558 . + . ID=gene-LDO45_RS05890;Name=LDO45_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05890;old_locus_tag=BDI4_1240013 NZ_CAJZAS010000029.1 Protein Homology CDS 8261 10558 . + 0 ID=cds-WP_223960574.1;Parent=gene-LDO45_RS05890;Dbxref=GenBank:WP_223960574.1;Name=WP_223960574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734044.1;locus_tag=LDO45_RS05890;product=phage integrase family protein;protein_id=WP_223960574.1;transl_table=11 NZ_CAJZAS010000029.1 RefSeq gene 10754 10984 . + . ID=gene-LDO45_RS05895;Name=LDO45_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05895;old_locus_tag=BDI4_1240014 NZ_CAJZAS010000029.1 GeneMarkS-2+ CDS 10754 10984 . + 0 ID=cds-WP_223960576.1;Parent=gene-LDO45_RS05895;Dbxref=GenBank:WP_223960576.1;Name=WP_223960576.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS05895;product=hypothetical protein;protein_id=WP_223960576.1;transl_table=11 NZ_CAJZAS010000029.1 RefSeq gene 11052 11240 . - . ID=gene-LDO45_RS05900;Name=traD;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=LDO45_RS05900;old_locus_tag=BDI4_1240015 NZ_CAJZAS010000029.1 Protein Homology CDS 11052 11240 . - 0 ID=cds-WP_223960588.1;Parent=gene-LDO45_RS05900;Dbxref=GenBank:WP_223960588.1;Name=WP_223960588.1;gbkey=CDS;gene=traD;inference=COORDINATES: protein motif:HMM:NF018152.5;locus_tag=LDO45_RS05900;product=conjugal transfer protein TraD;protein_id=WP_223960588.1;transl_table=11 NZ_CAJZAS010000029.1 RefSeq gene 11667 11918 . + . ID=gene-LDO45_RS05905;Name=LDO45_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05905;old_locus_tag=BDI4_1240017 NZ_CAJZAS010000029.1 Protein Homology CDS 11667 11918 . + 0 ID=cds-WP_102636070.1;Parent=gene-LDO45_RS05905;Dbxref=GenBank:WP_102636070.1;Name=WP_102636070.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734108.1;locus_tag=LDO45_RS05905;product=AbrB/MazE/SpoVT family DNA-binding domain-containing protein;protein_id=WP_102636070.1;transl_table=11 NZ_CAJZAS010000029.1 RefSeq gene 11912 12262 . + . ID=gene-LDO45_RS05910;Name=LDO45_RS05910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05910;old_locus_tag=BDI4_1240018 NZ_CAJZAS010000029.1 Protein Homology CDS 11912 12262 . + 0 ID=cds-WP_223960578.1;Parent=gene-LDO45_RS05910;Dbxref=GenBank:WP_223960578.1;Name=WP_223960578.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397259.1;locus_tag=LDO45_RS05910;product=type II toxin-antitoxin system ChpB family toxin;protein_id=WP_223960578.1;transl_table=11 NZ_CAJZAS010000029.1 RefSeq gene 12277 12516 . + . ID=gene-LDO45_RS05915;Name=LDO45_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05915;old_locus_tag=BDI4_1240019 NZ_CAJZAS010000029.1 Protein Homology CDS 12277 12516 . + 0 ID=cds-WP_223960581.1;Parent=gene-LDO45_RS05915;Dbxref=GenBank:WP_223960581.1;Name=WP_223960581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734062.1;locus_tag=LDO45_RS05915;product=hypothetical protein;protein_id=WP_223960581.1;transl_table=11 NZ_CAJZAS010000029.1 RefSeq gene 12529 12771 . + . ID=gene-LDO45_RS05920;Name=LDO45_RS05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05920;old_locus_tag=BDI4_1240020 NZ_CAJZAS010000029.1 Protein Homology CDS 12529 12771 . + 0 ID=cds-WP_223960583.1;Parent=gene-LDO45_RS05920;Dbxref=GenBank:WP_223960583.1;Name=WP_223960583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758187.1;locus_tag=LDO45_RS05920;product=hypothetical protein;protein_id=WP_223960583.1;transl_table=11 NZ_CAJZAS010000029.1 RefSeq gene 13032 13262 . + . ID=gene-LDO45_RS05925;Name=LDO45_RS05925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05925;old_locus_tag=BDI4_1240021 NZ_CAJZAS010000029.1 GeneMarkS-2+ CDS 13032 13262 . + 0 ID=cds-WP_223960585.1;Parent=gene-LDO45_RS05925;Dbxref=GenBank:WP_223960585.1;Name=WP_223960585.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS05925;product=hypothetical protein;protein_id=WP_223960585.1;transl_table=11 NZ_CAJZAS010000029.1 RefSeq gene 13481 13786 . + . ID=gene-LDO45_RS05930;Name=LDO45_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05930;old_locus_tag=BDI4_1240022 NZ_CAJZAS010000029.1 GeneMarkS-2+ CDS 13481 13786 . + 0 ID=cds-WP_223960586.1;Parent=gene-LDO45_RS05930;Dbxref=GenBank:WP_223960586.1;Name=WP_223960586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS05930;product=hypothetical protein;protein_id=WP_223960586.1;transl_table=11 ##sequence-region NZ_CAJZAS010000030.1 1 16404 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000030.1 RefSeq region 1 16404 . + . ID=NZ_CAJZAS010000030.1:1..16404;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_125 NZ_CAJZAS010000030.1 RefSeq gene 275 1390 . - . ID=gene-LDO45_RS05935;Name=LDO45_RS05935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05935;old_locus_tag=BDI4_1250001 NZ_CAJZAS010000030.1 Protein Homology CDS 275 1390 . - 0 ID=cds-WP_059532455.1;Parent=gene-LDO45_RS05935;Dbxref=GenBank:WP_059532455.1;Name=WP_059532455.1;Ontology_term=GO:0015846,GO:0019808,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411182.1;locus_tag=LDO45_RS05935;product=polyamine ABC transporter substrate-binding protein;protein_id=WP_059532455.1;transl_table=11 NZ_CAJZAS010000030.1 RefSeq pseudogene 1453 2789 . - . ID=gene-LDO45_RS05940;Name=LDO45_RS05940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS05940;pseudo=true NZ_CAJZAS010000030.1 Protein Homology CDS 1453 2789 . - 0 ID=cds-LDO45_RS05940;Parent=gene-LDO45_RS05940;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334492.1;locus_tag=LDO45_RS05940;product=aspartate aminotransferase family protein;pseudo=true;transl_table=11 NZ_CAJZAS010000030.1 RefSeq gene 2827 4164 . - . ID=gene-LDO45_RS05945;Name=LDO45_RS05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05945;old_locus_tag=BDI4_1250004 NZ_CAJZAS010000030.1 Protein Homology CDS 2827 4164 . - 0 ID=cds-WP_059691371.1;Parent=gene-LDO45_RS05945;Dbxref=GenBank:WP_059691371.1;Name=WP_059691371.1;Ontology_term=GO:0006542,GO:0004356,GO:0005524;gbkey=CDS;go_function=glutamine synthetase activity|0004356||IEA,ATP binding|0005524||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851914.1;locus_tag=LDO45_RS05945;product=glutamine synthetase family protein;protein_id=WP_059691371.1;transl_table=11 NZ_CAJZAS010000030.1 RefSeq gene 4194 4979 . - . ID=gene-LDO45_RS05950;Name=LDO45_RS05950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05950;old_locus_tag=BDI4_1250005 NZ_CAJZAS010000030.1 Protein Homology CDS 4194 4979 . - 0 ID=cds-WP_059691372.1;Parent=gene-LDO45_RS05950;Dbxref=GenBank:WP_059691372.1;Name=WP_059691372.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895827.1;locus_tag=LDO45_RS05950;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_059691372.1;transl_table=11 NZ_CAJZAS010000030.1 RefSeq gene 5265 5447 . - . ID=gene-LDO45_RS05955;Name=LDO45_RS05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05955 NZ_CAJZAS010000030.1 Protein Homology CDS 5265 5447 . - 0 ID=cds-WP_006402789.1;Parent=gene-LDO45_RS05955;Dbxref=GenBank:WP_006402789.1;Name=WP_006402789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402789.1;locus_tag=LDO45_RS05955;product=hypothetical protein;protein_id=WP_006402789.1;transl_table=11 NZ_CAJZAS010000030.1 RefSeq gene 5916 6467 . + . ID=gene-LDO45_RS05960;Name=LDO45_RS05960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05960;old_locus_tag=BDI4_1250006 NZ_CAJZAS010000030.1 Protein Homology CDS 5916 6467 . + 0 ID=cds-WP_014895828.1;Parent=gene-LDO45_RS05960;Dbxref=GenBank:WP_014895828.1;Name=WP_014895828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529988.1;locus_tag=LDO45_RS05960;product=cupin domain-containing protein;protein_id=WP_014895828.1;transl_table=11 NZ_CAJZAS010000030.1 RefSeq gene 6553 8043 . + . ID=gene-LDO45_RS05965;Name=LDO45_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05965;old_locus_tag=BDI4_1250007 NZ_CAJZAS010000030.1 Protein Homology CDS 6553 8043 . + 0 ID=cds-WP_223960590.1;Parent=gene-LDO45_RS05965;Dbxref=GenBank:WP_223960590.1;Name=WP_223960590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010108095.1;locus_tag=LDO45_RS05965;product=aldehyde dehydrogenase;protein_id=WP_223960590.1;transl_table=11 NZ_CAJZAS010000030.1 RefSeq gene 8094 8294 . - . ID=gene-LDO45_RS05970;Name=LDO45_RS05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05970;old_locus_tag=BDI4_1250008 NZ_CAJZAS010000030.1 Protein Homology CDS 8094 8294 . - 0 ID=cds-WP_006754615.1;Parent=gene-LDO45_RS05970;Dbxref=GenBank:WP_006754615.1;Name=WP_006754615.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364874.1;locus_tag=LDO45_RS05970;product=heavy-metal-associated domain-containing protein;protein_id=WP_006754615.1;transl_table=11 NZ_CAJZAS010000030.1 RefSeq gene 8628 8960 . + . ID=gene-LDO45_RS05975;Name=LDO45_RS05975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05975;old_locus_tag=BDI4_1250009 NZ_CAJZAS010000030.1 Protein Homology CDS 8628 8960 . + 0 ID=cds-WP_223960592.1;Parent=gene-LDO45_RS05975;Dbxref=GenBank:WP_223960592.1;Name=WP_223960592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407998.1;locus_tag=LDO45_RS05975;product=cupredoxin domain-containing protein;protein_id=WP_223960592.1;transl_table=11 NZ_CAJZAS010000030.1 RefSeq gene 8973 9809 . + . ID=gene-LDO45_RS05980;Name=LDO45_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05980;old_locus_tag=BDI4_1250010 NZ_CAJZAS010000030.1 Protein Homology CDS 8973 9809 . + 0 ID=cds-WP_059523855.1;Parent=gene-LDO45_RS05980;Dbxref=GenBank:WP_059523855.1;Name=WP_059523855.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524928.1;locus_tag=LDO45_RS05980;product=FTR1 family protein;protein_id=WP_059523855.1;transl_table=11 NZ_CAJZAS010000030.1 RefSeq gene 9899 10117 . - . ID=gene-LDO45_RS05985;Name=LDO45_RS05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05985;old_locus_tag=BDI4_1250011 NZ_CAJZAS010000030.1 Protein Homology CDS 9899 10117 . - 0 ID=cds-WP_059450688.1;Parent=gene-LDO45_RS05985;Dbxref=GenBank:WP_059450688.1;Name=WP_059450688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334484.1;locus_tag=LDO45_RS05985;product=hypothetical protein;protein_id=WP_059450688.1;transl_table=11 NZ_CAJZAS010000030.1 RefSeq gene 10117 10587 . - . ID=gene-LDO45_RS05990;Name=LDO45_RS05990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05990;old_locus_tag=BDI4_1250012 NZ_CAJZAS010000030.1 Protein Homology CDS 10117 10587 . - 0 ID=cds-WP_223960594.1;Parent=gene-LDO45_RS05990;Dbxref=GenBank:WP_223960594.1;Name=WP_223960594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402797.1;locus_tag=LDO45_RS05990;product=hypothetical protein;protein_id=WP_223960594.1;transl_table=11 NZ_CAJZAS010000030.1 RefSeq gene 10676 10996 . - . ID=gene-LDO45_RS05995;Name=LDO45_RS05995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS05995;old_locus_tag=BDI4_1250013 NZ_CAJZAS010000030.1 Protein Homology CDS 10676 10996 . - 0 ID=cds-WP_059523859.1;Parent=gene-LDO45_RS05995;Dbxref=GenBank:WP_059523859.1;Name=WP_059523859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402798.1;locus_tag=LDO45_RS05995;product=DNA-binding transcriptional regulator;protein_id=WP_059523859.1;transl_table=11 NZ_CAJZAS010000030.1 RefSeq gene 10989 11354 . - . ID=gene-LDO45_RS06000;Name=LDO45_RS06000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06000;old_locus_tag=BDI4_1250014 NZ_CAJZAS010000030.1 Protein Homology CDS 10989 11354 . - 0 ID=cds-WP_059523861.1;Parent=gene-LDO45_RS06000;Dbxref=GenBank:WP_059523861.1;Name=WP_059523861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477597.1;locus_tag=LDO45_RS06000;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_059523861.1;transl_table=11 NZ_CAJZAS010000030.1 RefSeq gene 11485 13302 . - . ID=gene-LDO45_RS06005;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LDO45_RS06005;old_locus_tag=BDI4_1250015 NZ_CAJZAS010000030.1 Protein Homology CDS 11485 13302 . - 0 ID=cds-WP_059523863.1;Parent=gene-LDO45_RS06005;Dbxref=GenBank:WP_059523863.1;Name=WP_059523863.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011000145.1;locus_tag=LDO45_RS06005;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_059523863.1;transl_table=11 NZ_CAJZAS010000030.1 RefSeq gene 13357 14718 . - . ID=gene-LDO45_RS06010;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=LDO45_RS06010;old_locus_tag=BDI4_1250016 NZ_CAJZAS010000030.1 Protein Homology CDS 13357 14718 . - 0 ID=cds-WP_059691377.1;Parent=gene-LDO45_RS06010;Dbxref=GenBank:WP_059691377.1;Name=WP_059691377.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134,GO:0005737;gbkey=CDS;gene=glmU;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353430.1;locus_tag=LDO45_RS06010;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_059691377.1;transl_table=11 NZ_CAJZAS010000030.1 RefSeq gene 14853 15848 . - . ID=gene-LDO45_RS06015;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=LDO45_RS06015;old_locus_tag=BDI4_1250017 NZ_CAJZAS010000030.1 Protein Homology CDS 14853 15848 . - 0 ID=cds-WP_059523868.1;Parent=gene-LDO45_RS06015;Dbxref=GenBank:WP_059523868.1;Name=WP_059523868.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214279.1;locus_tag=LDO45_RS06015;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_059523868.1;transl_table=11 NZ_CAJZAS010000030.1 RefSeq gene 15845 16249 . - . ID=gene-LDO45_RS06020;Name=LDO45_RS06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06020;old_locus_tag=BDI4_1250018 NZ_CAJZAS010000030.1 Protein Homology CDS 15845 16249 . - 0 ID=cds-WP_059450683.1;Parent=gene-LDO45_RS06020;Dbxref=GenBank:WP_059450683.1;Name=WP_059450683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893357.1;locus_tag=LDO45_RS06020;product=dihydroneopterin aldolase;protein_id=WP_059450683.1;transl_table=11 ##sequence-region NZ_CAJZAS010000031.1 1 1182 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000031.1 RefSeq region 1 1182 . + . ID=NZ_CAJZAS010000031.1:1..1182;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_126 NZ_CAJZAS010000031.1 RefSeq gene 1 1182 . + . ID=gene-LDO45_RS06025;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=LDO45_RS06025;old_locus_tag=BDI4_1260001;partial=true;start_range=.,1 NZ_CAJZAS010000031.1 Protein Homology CDS 1 1182 . + 0 ID=cds-WP_034191706.1;Parent=gene-LDO45_RS06025;Dbxref=GenBank:WP_034191706.1;Name=WP_034191706.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011299314.1;locus_tag=LDO45_RS06025;partial=true;product=elongation factor Tu;protein_id=WP_034191706.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAS010000032.1 1 14119 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000032.1 RefSeq region 1 14119 . + . ID=NZ_CAJZAS010000032.1:1..14119;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_127 NZ_CAJZAS010000032.1 RefSeq pseudogene 1 228 . + . ID=gene-LDO45_RS06030;Name=LDO45_RS06030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS06030;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000032.1 Protein Homology CDS 1 228 . + 0 ID=cds-LDO45_RS06030;Parent=gene-LDO45_RS06030;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661443.1;locus_tag=LDO45_RS06030;partial=true;product=cytochrome c;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000032.1 RefSeq gene 302 700 . - . ID=gene-LDO45_RS06035;Name=LDO45_RS06035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06035;old_locus_tag=BDI4_1270001 NZ_CAJZAS010000032.1 Protein Homology CDS 302 700 . - 0 ID=cds-WP_059537413.1;Parent=gene-LDO45_RS06035;Dbxref=GenBank:WP_059537413.1;Name=WP_059537413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014251997.1;locus_tag=LDO45_RS06035;product=RidA family protein;protein_id=WP_059537413.1;transl_table=11 NZ_CAJZAS010000032.1 RefSeq gene 814 1590 . - . ID=gene-LDO45_RS06040;Name=benD;gbkey=Gene;gene=benD;gene_biotype=protein_coding;locus_tag=LDO45_RS06040;old_locus_tag=BDI4_1270002 NZ_CAJZAS010000032.1 Protein Homology CDS 814 1590 . - 0 ID=cds-WP_059536856.1;Parent=gene-LDO45_RS06040;Dbxref=GenBank:WP_059536856.1;Name=WP_059536856.1;gbkey=CDS;gene=benD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336679.1;locus_tag=LDO45_RS06040;product=benzoate diol dehydrogenase BenD;protein_id=WP_059536856.1;transl_table=11 NZ_CAJZAS010000032.1 RefSeq gene 1587 2609 . - . ID=gene-LDO45_RS06045;Name=benC;gbkey=Gene;gene=benC;gene_biotype=protein_coding;locus_tag=LDO45_RS06045;old_locus_tag=BDI4_1270003 NZ_CAJZAS010000032.1 Protein Homology CDS 1587 2609 . - 0 ID=cds-WP_223960598.1;Parent=gene-LDO45_RS06045;Dbxref=GenBank:WP_223960598.1;Name=WP_223960598.1;gbkey=CDS;gene=benC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485361.1;locus_tag=LDO45_RS06045;product=benzoate 1%2C2-dioxygenase electron transfer component BenC;protein_id=WP_223960598.1;transl_table=11 NZ_CAJZAS010000032.1 RefSeq gene 2649 3137 . - . ID=gene-LDO45_RS06050;Name=benB;gbkey=Gene;gene=benB;gene_biotype=protein_coding;locus_tag=LDO45_RS06050;old_locus_tag=BDI4_1270005 NZ_CAJZAS010000032.1 Protein Homology CDS 2649 3137 . - 0 ID=cds-WP_223960600.1;Parent=gene-LDO45_RS06050;Dbxref=GenBank:WP_223960600.1;Name=WP_223960600.1;Ontology_term=GO:0008152;gbkey=CDS;gene=benB;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011695017.1;locus_tag=LDO45_RS06050;product=benzoate 1%2C2-dioxygenase small subunit;protein_id=WP_223960600.1;transl_table=11 NZ_CAJZAS010000032.1 RefSeq gene 3134 4492 . - . ID=gene-LDO45_RS06055;Name=LDO45_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06055;old_locus_tag=BDI4_1270006 NZ_CAJZAS010000032.1 Protein Homology CDS 3134 4492 . - 0 ID=cds-WP_059536868.1;Parent=gene-LDO45_RS06055;Dbxref=GenBank:WP_059536868.1;Name=WP_059536868.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661450.1;locus_tag=LDO45_RS06055;product=Rieske 2Fe-2S domain-containing protein;protein_id=WP_059536868.1;transl_table=11 NZ_CAJZAS010000032.1 RefSeq gene 4609 5553 . - . ID=gene-LDO45_RS06060;Name=catA;gbkey=Gene;gene=catA;gene_biotype=protein_coding;locus_tag=LDO45_RS06060;old_locus_tag=BDI4_1270007 NZ_CAJZAS010000032.1 Protein Homology CDS 4609 5553 . - 0 ID=cds-WP_223960602.1;Parent=gene-LDO45_RS06060;Dbxref=GenBank:WP_223960602.1;Name=WP_223960602.1;Ontology_term=GO:0019615,GO:0005506,GO:0018576;gbkey=CDS;gene=catA;go_function=iron ion binding|0005506||IEA,catechol 1%2C2-dioxygenase activity|0018576||IEA;go_process=catechol catabolic process%2C ortho-cleavage|0019615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008919234.1;locus_tag=LDO45_RS06060;product=catechol 1%2C2-dioxygenase;protein_id=WP_223960602.1;transl_table=11 NZ_CAJZAS010000032.1 RefSeq gene 5627 5917 . - . ID=gene-LDO45_RS06065;Name=catC;gbkey=Gene;gene=catC;gene_biotype=protein_coding;locus_tag=LDO45_RS06065;old_locus_tag=BDI4_1270008 NZ_CAJZAS010000032.1 Protein Homology CDS 5627 5917 . - 0 ID=cds-WP_059536876.1;Parent=gene-LDO45_RS06065;Dbxref=GenBank:WP_059536876.1;Name=WP_059536876.1;Ontology_term=GO:0042952,GO:0016159;gbkey=CDS;gene=catC;go_function=muconolactone delta-isomerase activity|0016159||IEA;go_process=beta-ketoadipate pathway|0042952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407850.1;locus_tag=LDO45_RS06065;product=muconolactone Delta-isomerase;protein_id=WP_059536876.1;transl_table=11 NZ_CAJZAS010000032.1 RefSeq gene 5963 7099 . - . ID=gene-LDO45_RS06070;Name=LDO45_RS06070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06070;old_locus_tag=BDI4_1270009 NZ_CAJZAS010000032.1 Protein Homology CDS 5963 7099 . - 0 ID=cds-WP_223960604.1;Parent=gene-LDO45_RS06070;Dbxref=GenBank:WP_223960604.1;Name=WP_223960604.1;Ontology_term=GO:0018849,GO:0018850,GO:0030145;gbkey=CDS;go_function=muconate cycloisomerase activity|0018849||IEA,chloromuconate cycloisomerase activity|0018850||IEA,manganese ion binding|0030145||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413726.1;locus_tag=LDO45_RS06070;product=muconate/chloromuconate family cycloisomerase;protein_id=WP_223960604.1;transl_table=11 NZ_CAJZAS010000032.1 RefSeq gene 7472 8998 . - . ID=gene-LDO45_RS06075;Name=LDO45_RS06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06075;old_locus_tag=BDI4_1270010 NZ_CAJZAS010000032.1 Protein Homology CDS 7472 8998 . - 0 ID=cds-WP_223960606.1;Parent=gene-LDO45_RS06075;Dbxref=GenBank:WP_223960606.1;Name=WP_223960606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366710.1;locus_tag=LDO45_RS06075;product=CYTH and CHAD domain-containing protein;protein_id=WP_223960606.1;transl_table=11 NZ_CAJZAS010000032.1 RefSeq gene 9138 10322 . - . ID=gene-LDO45_RS06080;Name=LDO45_RS06080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06080;old_locus_tag=BDI4_1270011 NZ_CAJZAS010000032.1 Protein Homology CDS 9138 10322 . - 0 ID=cds-WP_059700828.1;Parent=gene-LDO45_RS06080;Dbxref=GenBank:WP_059700828.1;Name=WP_059700828.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758807.1;locus_tag=LDO45_RS06080;product=sugar transporter;protein_id=WP_059700828.1;transl_table=11 NZ_CAJZAS010000032.1 RefSeq gene 10512 11186 . + . ID=gene-LDO45_RS06085;Name=LDO45_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06085;old_locus_tag=BDI4_1270012 NZ_CAJZAS010000032.1 Protein Homology CDS 10512 11186 . + 0 ID=cds-WP_044843419.1;Parent=gene-LDO45_RS06085;Dbxref=GenBank:WP_044843419.1;Name=WP_044843419.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008347718.1;locus_tag=LDO45_RS06085;product=HAD family hydrolase;protein_id=WP_044843419.1;transl_table=11 NZ_CAJZAS010000032.1 RefSeq gene 11289 11531 . - . ID=gene-LDO45_RS06090;Name=LDO45_RS06090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06090;old_locus_tag=BDI4_1270014 NZ_CAJZAS010000032.1 Protein Homology CDS 11289 11531 . - 0 ID=cds-WP_059536889.1;Parent=gene-LDO45_RS06090;Dbxref=GenBank:WP_059536889.1;Name=WP_059536889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372628.1;locus_tag=LDO45_RS06090;product=DUF6566 family protein;protein_id=WP_059536889.1;transl_table=11 NZ_CAJZAS010000032.1 RefSeq gene 11710 12405 . + . ID=gene-LDO45_RS06095;Name=LDO45_RS06095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06095;old_locus_tag=BDI4_1270015 NZ_CAJZAS010000032.1 Protein Homology CDS 11710 12405 . + 0 ID=cds-WP_059536892.1;Parent=gene-LDO45_RS06095;Dbxref=GenBank:WP_059536892.1;Name=WP_059536892.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660492.1;locus_tag=LDO45_RS06095;product=MgtC/SapB family protein;protein_id=WP_059536892.1;transl_table=11 NZ_CAJZAS010000032.1 RefSeq gene 12402 12740 . + . ID=gene-LDO45_RS06100;Name=LDO45_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06100;old_locus_tag=BDI4_1270013 NZ_CAJZAS010000032.1 Protein Homology CDS 12402 12740 . + 0 ID=cds-WP_059536895.1;Parent=gene-LDO45_RS06100;Dbxref=GenBank:WP_059536895.1;Name=WP_059536895.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405125.1;locus_tag=LDO45_RS06100;product=hypothetical protein;protein_id=WP_059536895.1;transl_table=11 NZ_CAJZAS010000032.1 RefSeq gene 12737 14119 . + . ID=gene-LDO45_RS06105;Name=LDO45_RS06105;end_range=14119,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06105;partial=true NZ_CAJZAS010000032.1 Protein Homology CDS 12737 14119 . + 0 ID=cds-WP_223960607.1;Parent=gene-LDO45_RS06105;Dbxref=GenBank:WP_223960607.1;Name=WP_223960607.1;end_range=14119,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417153.1;locus_tag=LDO45_RS06105;partial=true;product=phospholipase D-like domain-containing protein;protein_id=WP_223960607.1;transl_table=11 ##sequence-region NZ_CAJZAS010000033.1 1 23815 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000033.1 RefSeq region 1 23815 . + . ID=NZ_CAJZAS010000033.1:1..23815;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_128 NZ_CAJZAS010000033.1 RefSeq gene 1 1212 . + . ID=gene-LDO45_RS06110;Name=LDO45_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06110;old_locus_tag=BDI4_1280001;partial=true;start_range=.,1 NZ_CAJZAS010000033.1 Protein Homology CDS 1 1212 . + 0 ID=cds-WP_223960609.1;Parent=gene-LDO45_RS06110;Dbxref=GenBank:WP_223960609.1;Name=WP_223960609.1;Ontology_term=GO:0033922;gbkey=CDS;go_function=peptidoglycan beta-N-acetylmuramidase activity|0033922||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218224.1;locus_tag=LDO45_RS06110;partial=true;product=exo-beta-N-acetylmuramidase NamZ domain-containing protein;protein_id=WP_223960609.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000033.1 RefSeq gene 1443 1859 . + . ID=gene-LDO45_RS06115;Name=LDO45_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06115;old_locus_tag=BDI4_1280002 NZ_CAJZAS010000033.1 Protein Homology CDS 1443 1859 . + 0 ID=cds-WP_374109513.1;Parent=gene-LDO45_RS06115;Dbxref=GenBank:WP_374109513.1;Name=WP_374109513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218223.1;locus_tag=LDO45_RS06115;product=DUF1924 domain-containing protein;protein_id=WP_374109513.1;transl_table=11 NZ_CAJZAS010000033.1 RefSeq gene 1947 2393 . + . ID=gene-LDO45_RS06120;Name=LDO45_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06120;old_locus_tag=BDI4_1280003 NZ_CAJZAS010000033.1 Protein Homology CDS 1947 2393 . + 0 ID=cds-WP_223960645.1;Parent=gene-LDO45_RS06120;Dbxref=GenBank:WP_223960645.1;Name=WP_223960645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218222.1;locus_tag=LDO45_RS06120;product=diheme cytochrome c;protein_id=WP_223960645.1;transl_table=11 NZ_CAJZAS010000033.1 RefSeq gene 2359 3096 . + . ID=gene-LDO45_RS06125;Name=LDO45_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06125;old_locus_tag=BDI4_1280004 NZ_CAJZAS010000033.1 Protein Homology CDS 2359 3096 . + 0 ID=cds-WP_223960611.1;Parent=gene-LDO45_RS06125;Dbxref=GenBank:WP_223960611.1;Name=WP_223960611.1;Ontology_term=GO:0009055,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372548.1;locus_tag=LDO45_RS06125;product=cytochrome b/b6 domain-containing protein;protein_id=WP_223960611.1;transl_table=11 NZ_CAJZAS010000033.1 RefSeq gene 3120 3785 . + . ID=gene-LDO45_RS06130;Name=LDO45_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06130;old_locus_tag=BDI4_1280005 NZ_CAJZAS010000033.1 Protein Homology CDS 3120 3785 . + 0 ID=cds-WP_223960613.1;Parent=gene-LDO45_RS06130;Dbxref=GenBank:WP_223960613.1;Name=WP_223960613.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218220.1;locus_tag=LDO45_RS06130;product=response regulator;protein_id=WP_223960613.1;transl_table=11 NZ_CAJZAS010000033.1 RefSeq gene 3782 5170 . + . ID=gene-LDO45_RS06135;Name=LDO45_RS06135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06135;old_locus_tag=BDI4_1280006 NZ_CAJZAS010000033.1 Protein Homology CDS 3782 5170 . + 0 ID=cds-WP_059536454.1;Parent=gene-LDO45_RS06135;Dbxref=GenBank:WP_059536454.1;Name=WP_059536454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218219.1;locus_tag=LDO45_RS06135;product=ATP-binding protein;protein_id=WP_059536454.1;transl_table=11 NZ_CAJZAS010000033.1 RefSeq gene 5288 5680 . - . ID=gene-LDO45_RS06140;Name=LDO45_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06140;old_locus_tag=BDI4_1280007 NZ_CAJZAS010000033.1 Protein Homology CDS 5288 5680 . - 0 ID=cds-WP_223960615.1;Parent=gene-LDO45_RS06140;Dbxref=GenBank:WP_223960615.1;Name=WP_223960615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009898199.1;locus_tag=LDO45_RS06140;product=hypothetical protein;protein_id=WP_223960615.1;transl_table=11 NZ_CAJZAS010000033.1 RefSeq gene 5939 6895 . + . ID=gene-LDO45_RS06145;Name=LDO45_RS06145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06145;old_locus_tag=BDI4_1280009 NZ_CAJZAS010000033.1 Protein Homology CDS 5939 6895 . + 0 ID=cds-WP_374109514.1;Parent=gene-LDO45_RS06145;Dbxref=GenBank:WP_374109514.1;Name=WP_374109514.1;Ontology_term=GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011400776.1;locus_tag=LDO45_RS06145;product=cation diffusion facilitator family transporter;protein_id=WP_374109514.1;transl_table=11 NZ_CAJZAS010000033.1 RefSeq gene 6946 7563 . - . ID=gene-LDO45_RS06150;Name=LDO45_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06150;old_locus_tag=BDI4_1280010 NZ_CAJZAS010000033.1 Protein Homology CDS 6946 7563 . - 0 ID=cds-WP_223960617.1;Parent=gene-LDO45_RS06150;Dbxref=GenBank:WP_223960617.1;Name=WP_223960617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488463.1;locus_tag=LDO45_RS06150;product=hypothetical protein;protein_id=WP_223960617.1;transl_table=11 NZ_CAJZAS010000033.1 RefSeq gene 7792 10083 . + . ID=gene-LDO45_RS06155;Name=LDO45_RS06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06155;old_locus_tag=BDI4_1280011 NZ_CAJZAS010000033.1 Protein Homology CDS 7792 10083 . + 0 ID=cds-WP_223960619.1;Parent=gene-LDO45_RS06155;Dbxref=GenBank:WP_223960619.1;Name=WP_223960619.1;Ontology_term=GO:0005524,GO:0015662,GO:0016887,GO:0019829,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,P-type ion transporter activity|0015662||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218216.1;locus_tag=LDO45_RS06155;product=heavy metal translocating P-type ATPase;protein_id=WP_223960619.1;transl_table=11 NZ_CAJZAS010000033.1 RefSeq gene 10096 11049 . - . ID=gene-LDO45_RS06160;Name=LDO45_RS06160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06160;old_locus_tag=BDI4_1280012 NZ_CAJZAS010000033.1 Protein Homology CDS 10096 11049 . - 0 ID=cds-WP_223960621.1;Parent=gene-LDO45_RS06160;Dbxref=GenBank:WP_223960621.1;Name=WP_223960621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880350.1;locus_tag=LDO45_RS06160;product=universal stress protein;protein_id=WP_223960621.1;transl_table=11 NZ_CAJZAS010000033.1 RefSeq gene 11376 11696 . + . ID=gene-LDO45_RS06165;Name=LDO45_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06165;old_locus_tag=BDI4_1280014 NZ_CAJZAS010000033.1 Protein Homology CDS 11376 11696 . + 0 ID=cds-WP_223960623.1;Parent=gene-LDO45_RS06165;Dbxref=GenBank:WP_223960623.1;Name=WP_223960623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897737.1;locus_tag=LDO45_RS06165;product=DUF4148 domain-containing protein;protein_id=WP_223960623.1;transl_table=11 NZ_CAJZAS010000033.1 RefSeq gene 11729 12523 . - . ID=gene-LDO45_RS06170;Name=LDO45_RS06170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06170;old_locus_tag=BDI4_1280015 NZ_CAJZAS010000033.1 Protein Homology CDS 11729 12523 . - 0 ID=cds-WP_223960625.1;Parent=gene-LDO45_RS06170;Dbxref=GenBank:WP_223960625.1;Name=WP_223960625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481461.1;locus_tag=LDO45_RS06170;product=hypothetical protein;protein_id=WP_223960625.1;transl_table=11 NZ_CAJZAS010000033.1 RefSeq gene 12678 13505 . - . ID=gene-LDO45_RS06175;Name=LDO45_RS06175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06175;old_locus_tag=BDI4_1280016 NZ_CAJZAS010000033.1 Protein Homology CDS 12678 13505 . - 0 ID=cds-WP_059693146.1;Parent=gene-LDO45_RS06175;Dbxref=GenBank:WP_059693146.1;Name=WP_059693146.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498538.1;locus_tag=LDO45_RS06175;product=hypothetical protein;protein_id=WP_059693146.1;transl_table=11 NZ_CAJZAS010000033.1 RefSeq gene 13626 14210 . - . ID=gene-LDO45_RS06180;Name=LDO45_RS06180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06180;old_locus_tag=BDI4_1280017 NZ_CAJZAS010000033.1 Protein Homology CDS 13626 14210 . - 0 ID=cds-WP_223960627.1;Parent=gene-LDO45_RS06180;Dbxref=GenBank:WP_223960627.1;Name=WP_223960627.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479894.1;locus_tag=LDO45_RS06180;product=tetratricopeptide repeat protein;protein_id=WP_223960627.1;transl_table=11 NZ_CAJZAS010000033.1 RefSeq gene 14708 15319 . + . ID=gene-LDO45_RS06185;Name=LDO45_RS06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06185;old_locus_tag=BDI4_1280018 NZ_CAJZAS010000033.1 Protein Homology CDS 14708 15319 . + 0 ID=cds-WP_223960628.1;Parent=gene-LDO45_RS06185;Dbxref=GenBank:WP_223960628.1;Name=WP_223960628.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485824.1;locus_tag=LDO45_RS06185;product=TetR/AcrR family transcriptional regulator;protein_id=WP_223960628.1;transl_table=11 NZ_CAJZAS010000033.1 RefSeq gene 15413 16903 . - . ID=gene-LDO45_RS06190;Name=ansP;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=LDO45_RS06190;old_locus_tag=BDI4_1280019 NZ_CAJZAS010000033.1 Protein Homology CDS 15413 16903 . - 0 ID=cds-WP_223960630.1;Parent=gene-LDO45_RS06190;Dbxref=GenBank:WP_223960630.1;Name=WP_223960630.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;gene=ansP;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337455.1;locus_tag=LDO45_RS06190;product=L-asparagine permease;protein_id=WP_223960630.1;transl_table=11 NZ_CAJZAS010000033.1 RefSeq gene 17402 18208 . + . ID=gene-LDO45_RS06195;Name=LDO45_RS06195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06195;old_locus_tag=BDI4_1280020 NZ_CAJZAS010000033.1 Protein Homology CDS 17402 18208 . + 0 ID=cds-WP_059536415.1;Parent=gene-LDO45_RS06195;Dbxref=GenBank:WP_059536415.1;Name=WP_059536415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484387.1;locus_tag=LDO45_RS06195;product=transporter substrate-binding domain-containing protein;protein_id=WP_059536415.1;transl_table=11 NZ_CAJZAS010000033.1 RefSeq gene 18298 18984 . + . ID=gene-LDO45_RS06200;Name=LDO45_RS06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06200;old_locus_tag=BDI4_1280022 NZ_CAJZAS010000033.1 Protein Homology CDS 18298 18984 . + 0 ID=cds-WP_223960632.1;Parent=gene-LDO45_RS06200;Dbxref=GenBank:WP_223960632.1;Name=WP_223960632.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484385.1;locus_tag=LDO45_RS06200;product=amino acid ABC transporter permease;protein_id=WP_223960632.1;transl_table=11 NZ_CAJZAS010000033.1 RefSeq gene 18981 19631 . + . ID=gene-LDO45_RS06205;Name=LDO45_RS06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06205;old_locus_tag=BDI4_1280021 NZ_CAJZAS010000033.1 Protein Homology CDS 18981 19631 . + 0 ID=cds-WP_059700904.1;Parent=gene-LDO45_RS06205;Dbxref=GenBank:WP_059700904.1;Name=WP_059700904.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010097593.1;locus_tag=LDO45_RS06205;product=amino acid ABC transporter permease;protein_id=WP_059700904.1;transl_table=11 NZ_CAJZAS010000033.1 RefSeq pseudogene 19618 19743 . + . ID=gene-LDO45_RS06210;Name=LDO45_RS06210;end_range=19743,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS06210;partial=true;pseudo=true NZ_CAJZAS010000033.1 Protein Homology CDS 19618 19743 . + 0 ID=cds-LDO45_RS06210;Parent=gene-LDO45_RS06210;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=19743,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545691.1;locus_tag=LDO45_RS06210;partial=true;product=amino acid ABC transporter ATP-binding protein;pseudo=true;transl_table=11 NZ_CAJZAS010000033.1 RefSeq gene 19837 20274 . - . ID=gene-LDO45_RS06215;Name=LDO45_RS06215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06215;old_locus_tag=BDI4_1280023 NZ_CAJZAS010000033.1 Protein Homology CDS 19837 20274 . - 0 ID=cds-WP_223960633.1;Parent=gene-LDO45_RS06215;Dbxref=GenBank:WP_223960633.1;Name=WP_223960633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762354.1;locus_tag=LDO45_RS06215;product=hypothetical protein;protein_id=WP_223960633.1;transl_table=11 NZ_CAJZAS010000033.1 RefSeq gene 20326 20616 . - . ID=gene-LDO45_RS06220;Name=LDO45_RS06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06220;old_locus_tag=BDI4_1280024 NZ_CAJZAS010000033.1 Protein Homology CDS 20326 20616 . - 0 ID=cds-WP_223960635.1;Parent=gene-LDO45_RS06220;Dbxref=GenBank:WP_223960635.1;Name=WP_223960635.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880553.1;locus_tag=LDO45_RS06220;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_223960635.1;transl_table=11 NZ_CAJZAS010000033.1 RefSeq gene 21139 21657 . + . ID=gene-LDO45_RS06225;Name=LDO45_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06225;old_locus_tag=BDI4_1280026 NZ_CAJZAS010000033.1 GeneMarkS-2+ CDS 21139 21657 . + 0 ID=cds-WP_223960637.1;Parent=gene-LDO45_RS06225;Dbxref=GenBank:WP_223960637.1;Name=WP_223960637.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS06225;product=hypothetical protein;protein_id=WP_223960637.1;transl_table=11 NZ_CAJZAS010000033.1 RefSeq gene 21710 21982 . + . ID=gene-LDO45_RS06230;Name=LDO45_RS06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06230;old_locus_tag=BDI4_1280027 NZ_CAJZAS010000033.1 GeneMarkS-2+ CDS 21710 21982 . + 0 ID=cds-WP_223960639.1;Parent=gene-LDO45_RS06230;Dbxref=GenBank:WP_223960639.1;Name=WP_223960639.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS06230;product=hypothetical protein;protein_id=WP_223960639.1;transl_table=11 NZ_CAJZAS010000033.1 RefSeq gene 22221 22763 . + . ID=gene-LDO45_RS06235;Name=LDO45_RS06235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06235 NZ_CAJZAS010000033.1 GeneMarkS-2+ CDS 22221 22763 . + 0 ID=cds-WP_223960641.1;Parent=gene-LDO45_RS06235;Dbxref=GenBank:WP_223960641.1;Name=WP_223960641.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS06235;product=hypothetical protein;protein_id=WP_223960641.1;transl_table=11 NZ_CAJZAS010000033.1 RefSeq gene 22942 23815 . + . ID=gene-LDO45_RS34490;Name=LDO45_RS34490;end_range=23815,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34490;partial=true NZ_CAJZAS010000033.1 Protein Homology CDS 22942 23815 . + 0 ID=cds-WP_374109515.1;Parent=gene-LDO45_RS34490;Dbxref=GenBank:WP_374109515.1;Name=WP_374109515.1;end_range=23815,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024418.5;locus_tag=LDO45_RS34490;partial=true;product=ESPR domain-containing protein;protein_id=WP_374109515.1;transl_table=11 ##sequence-region NZ_CAJZAS010000034.1 1 680 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000034.1 RefSeq region 1 680 . + . ID=NZ_CAJZAS010000034.1:1..680;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_129 NZ_CAJZAS010000034.1 RefSeq pseudogene 3 170 . + . ID=gene-LDO45_RS06250;Name=LDO45_RS06250;end_range=170,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS06250;old_locus_tag=BDI4_1290001;partial=true;pseudo=true NZ_CAJZAS010000034.1 Protein Homology CDS 3 170 . + 0 ID=cds-LDO45_RS06250;Parent=gene-LDO45_RS06250;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=170,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762187.1;locus_tag=LDO45_RS06250;partial=true;product=MFS transporter;pseudo=true;transl_table=11 NZ_CAJZAS010000034.1 RefSeq gene 395 680 . + . ID=gene-LDO45_RS06255;Name=LDO45_RS06255;end_range=680,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06255;partial=true NZ_CAJZAS010000034.1 GeneMarkS-2+ CDS 395 680 . + 0 ID=cds-WP_223960649.1;Parent=gene-LDO45_RS06255;Dbxref=GenBank:WP_223960649.1;Name=WP_223960649.1;end_range=680,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS06255;partial=true;product=hypothetical protein;protein_id=WP_223960649.1;transl_table=11 ##sequence-region NZ_CAJZAS010000035.1 1 87379 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000035.1 RefSeq region 1 87379 . + . ID=NZ_CAJZAS010000035.1:1..87379;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_13 NZ_CAJZAS010000035.1 RefSeq pseudogene 1 236 . + . ID=gene-LDO45_RS06260;Name=LDO45_RS06260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS06260;old_locus_tag=BDI4_130001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000035.1 Protein Homology CDS 1 236 . + 2 ID=cds-LDO45_RS06260;Parent=gene-LDO45_RS06260;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545027.1;locus_tag=LDO45_RS06260;partial=true;product=MFS transporter;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 258 1439 . - . ID=gene-LDO45_RS06265;Name=LDO45_RS06265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06265;old_locus_tag=BDI4_130002 NZ_CAJZAS010000035.1 Protein Homology CDS 258 1439 . - 0 ID=cds-WP_223960652.1;Parent=gene-LDO45_RS06265;Dbxref=GenBank:WP_223960652.1;Name=WP_223960652.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656444.1;locus_tag=LDO45_RS06265;product=EamA family transporter;protein_id=WP_223960652.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 1934 2287 . + . ID=gene-LDO45_RS06270;Name=LDO45_RS06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06270;old_locus_tag=BDI4_130004 NZ_CAJZAS010000035.1 Protein Homology CDS 1934 2287 . + 0 ID=cds-WP_223960654.1;Parent=gene-LDO45_RS06270;Dbxref=GenBank:WP_223960654.1;Name=WP_223960654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328204.1;locus_tag=LDO45_RS06270;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_223960654.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 2284 2565 . + . ID=gene-LDO45_RS06275;Name=LDO45_RS06275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06275;old_locus_tag=BDI4_130005 NZ_CAJZAS010000035.1 Protein Homology CDS 2284 2565 . + 0 ID=cds-WP_223960656.1;Parent=gene-LDO45_RS06275;Dbxref=GenBank:WP_223960656.1;Name=WP_223960656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497662.1;locus_tag=LDO45_RS06275;product=helix-turn-helix domain-containing protein;protein_id=WP_223960656.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 2607 3395 . - . ID=gene-LDO45_RS06280;Name=LDO45_RS06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06280;old_locus_tag=BDI4_130006 NZ_CAJZAS010000035.1 Protein Homology CDS 2607 3395 . - 0 ID=cds-WP_059523572.1;Parent=gene-LDO45_RS06280;Dbxref=GenBank:WP_059523572.1;Name=WP_059523572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754215.1;locus_tag=LDO45_RS06280;product=molybdopterin-dependent oxidoreductase;protein_id=WP_059523572.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 3425 4057 . - . ID=gene-LDO45_RS06285;Name=LDO45_RS06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06285;old_locus_tag=BDI4_130007 NZ_CAJZAS010000035.1 Protein Homology CDS 3425 4057 . - 0 ID=cds-WP_223960658.1;Parent=gene-LDO45_RS06285;Dbxref=GenBank:WP_223960658.1;Name=WP_223960658.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483711.1;locus_tag=LDO45_RS06285;product=cytochrome b/b6 domain-containing protein;protein_id=WP_223960658.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 4146 4397 . - . ID=gene-LDO45_RS06290;Name=LDO45_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06290;old_locus_tag=BDI4_130008 NZ_CAJZAS010000035.1 Protein Homology CDS 4146 4397 . - 0 ID=cds-WP_059523577.1;Parent=gene-LDO45_RS06290;Dbxref=GenBank:WP_059523577.1;Name=WP_059523577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363482.1;locus_tag=LDO45_RS06290;product=pentapeptide MXKDX repeat protein;protein_id=WP_059523577.1;transl_table=11 NZ_CAJZAS010000035.1 cmsearch riboswitch 4667 4783 . + . ID=id-NZ_CAJZAS010000035.1:4667..4783;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAS010000035.1 RefSeq gene 4908 6839 . + . ID=gene-LDO45_RS06295;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=LDO45_RS06295;old_locus_tag=BDI4_130009 NZ_CAJZAS010000035.1 Protein Homology CDS 4908 6839 . + 0 ID=cds-WP_059702128.1;Parent=gene-LDO45_RS06295;Dbxref=GenBank:WP_059702128.1;Name=WP_059702128.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697214.1;locus_tag=LDO45_RS06295;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_059702128.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 7105 7320 . + . ID=gene-LDO45_RS06300;Name=LDO45_RS06300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06300;old_locus_tag=BDI4_130010 NZ_CAJZAS010000035.1 Protein Homology CDS 7105 7320 . + 0 ID=cds-WP_059523582.1;Parent=gene-LDO45_RS06300;Dbxref=GenBank:WP_059523582.1;Name=WP_059523582.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011402513.1;locus_tag=LDO45_RS06300;product=glycine zipper 2TM domain-containing protein;protein_id=WP_059523582.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 7530 7778 . + . ID=gene-LDO45_RS06305;Name=LDO45_RS06305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06305;old_locus_tag=BDI4_130011 NZ_CAJZAS010000035.1 Protein Homology CDS 7530 7778 . + 0 ID=cds-WP_059523584.1;Parent=gene-LDO45_RS06305;Dbxref=GenBank:WP_059523584.1;Name=WP_059523584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363480.1;locus_tag=LDO45_RS06305;product=hypothetical protein;protein_id=WP_059523584.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 7923 8849 . + . ID=gene-LDO45_RS06310;Name=LDO45_RS06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06310;old_locus_tag=BDI4_130012 NZ_CAJZAS010000035.1 Protein Homology CDS 7923 8849 . + 0 ID=cds-WP_059702130.1;Parent=gene-LDO45_RS06310;Dbxref=GenBank:WP_059702130.1;Name=WP_059702130.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545018.1;locus_tag=LDO45_RS06310;product=DMT family transporter;protein_id=WP_059702130.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 9290 10570 . + . ID=gene-LDO45_RS06315;Name=LDO45_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06315;old_locus_tag=BDI4_130014 NZ_CAJZAS010000035.1 Protein Homology CDS 9290 10570 . + 0 ID=cds-WP_223960661.1;Parent=gene-LDO45_RS06315;Dbxref=GenBank:WP_223960661.1;Name=WP_223960661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213733.1;locus_tag=LDO45_RS06315;product=EAL domain-containing protein;protein_id=WP_223960661.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 10626 11030 . - . ID=gene-LDO45_RS06320;Name=arfB;gbkey=Gene;gene=arfB;gene_biotype=protein_coding;locus_tag=LDO45_RS06320;old_locus_tag=BDI4_130015 NZ_CAJZAS010000035.1 Protein Homology CDS 10626 11030 . - 0 ID=cds-WP_223960663.1;Parent=gene-LDO45_RS06320;Dbxref=GenBank:WP_223960663.1;Name=WP_223960663.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=arfB;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526513.1;locus_tag=LDO45_RS06320;product=alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB;protein_id=WP_223960663.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 11027 13315 . - . ID=gene-LDO45_RS06325;Name=LDO45_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06325;old_locus_tag=BDI4_130016 NZ_CAJZAS010000035.1 Protein Homology CDS 11027 13315 . - 0 ID=cds-WP_223960665.1;Parent=gene-LDO45_RS06325;Dbxref=GenBank:WP_223960665.1;Name=WP_223960665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363477.1;locus_tag=LDO45_RS06325;product=AAA family ATPase;protein_id=WP_223960665.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 13312 17016 . - . ID=gene-LDO45_RS06330;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=LDO45_RS06330;old_locus_tag=BDI4_130017 NZ_CAJZAS010000035.1 Protein Homology CDS 13312 17016 . - 0 ID=cds-WP_223960667.1;Parent=gene-LDO45_RS06330;Dbxref=GenBank:WP_223960667.1;Name=WP_223960667.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524,GO:0008854,GO:0009338;gbkey=CDS;gene=recB;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476411.1;locus_tag=LDO45_RS06330;product=exodeoxyribonuclease V subunit beta;protein_id=WP_223960667.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 17013 20351 . - . ID=gene-LDO45_RS06335;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=LDO45_RS06335;old_locus_tag=BDI4_130018 NZ_CAJZAS010000035.1 Protein Homology CDS 17013 20351 . - 0 ID=cds-WP_223960669.1;Parent=gene-LDO45_RS06335;Dbxref=GenBank:WP_223960669.1;Name=WP_223960669.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011204976.1;locus_tag=LDO45_RS06335;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_223960669.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 20533 22824 . + . ID=gene-LDO45_RS06340;Name=LDO45_RS06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06340;old_locus_tag=BDI4_130019 NZ_CAJZAS010000035.1 Protein Homology CDS 20533 22824 . + 0 ID=cds-WP_059523595.1;Parent=gene-LDO45_RS06340;Dbxref=GenBank:WP_059523595.1;Name=WP_059523595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754388.1;locus_tag=LDO45_RS06340;product=FUSC family membrane protein;protein_id=WP_059523595.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 23122 24489 . + . ID=gene-LDO45_RS06345;Name=LDO45_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06345;old_locus_tag=BDI4_130020 NZ_CAJZAS010000035.1 Protein Homology CDS 23122 24489 . + 0 ID=cds-WP_223960671.1;Parent=gene-LDO45_RS06345;Dbxref=GenBank:WP_223960671.1;Name=WP_223960671.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538452.1;locus_tag=LDO45_RS06345;product=amino acid permease;protein_id=WP_223960671.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 24649 24810 . - . ID=gene-LDO45_RS06350;Name=LDO45_RS06350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06350;old_locus_tag=BDI4_130021 NZ_CAJZAS010000035.1 Protein Homology CDS 24649 24810 . - 0 ID=cds-WP_006476417.1;Parent=gene-LDO45_RS06350;Dbxref=GenBank:WP_006476417.1;Name=WP_006476417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415664.1;locus_tag=LDO45_RS06350;product=hypothetical protein;protein_id=WP_006476417.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 25042 26085 . + . ID=gene-LDO45_RS06355;Name=LDO45_RS06355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06355;old_locus_tag=BDI4_130022 NZ_CAJZAS010000035.1 Protein Homology CDS 25042 26085 . + 0 ID=cds-WP_223960673.1;Parent=gene-LDO45_RS06355;Dbxref=GenBank:WP_223960673.1;Name=WP_223960673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764706.1;locus_tag=LDO45_RS06355;product=Fe(3+) ABC transporter substrate-binding protein;protein_id=WP_223960673.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 26075 27751 . + . ID=gene-LDO45_RS06360;Name=LDO45_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06360;old_locus_tag=BDI4_130023 NZ_CAJZAS010000035.1 Protein Homology CDS 26075 27751 . + 0 ID=cds-WP_223960675.1;Parent=gene-LDO45_RS06360;Dbxref=GenBank:WP_223960675.1;Name=WP_223960675.1;Ontology_term=GO:0006826,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851358.1;locus_tag=LDO45_RS06360;product=iron ABC transporter permease;protein_id=WP_223960675.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 27756 28529 . + . ID=gene-LDO45_RS06365;Name=LDO45_RS06365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06365;old_locus_tag=BDI4_130024 NZ_CAJZAS010000035.1 Protein Homology CDS 27756 28529 . + 0 ID=cds-WP_059691128.1;Parent=gene-LDO45_RS06365;Dbxref=GenBank:WP_059691128.1;Name=WP_059691128.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410734.1;locus_tag=LDO45_RS06365;product=ABC transporter ATP-binding protein;protein_id=WP_059691128.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 28610 29080 . - . ID=gene-LDO45_RS06370;Name=LDO45_RS06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06370;old_locus_tag=BDI4_130025 NZ_CAJZAS010000035.1 Protein Homology CDS 28610 29080 . - 0 ID=cds-WP_006754321.1;Parent=gene-LDO45_RS06370;Dbxref=GenBank:WP_006754321.1;Name=WP_006754321.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332862.1;locus_tag=LDO45_RS06370;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_006754321.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 29366 30007 . - . ID=gene-LDO45_RS06375;Name=LDO45_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06375;old_locus_tag=BDI4_130026 NZ_CAJZAS010000035.1 Protein Homology CDS 29366 30007 . - 0 ID=cds-WP_059702145.1;Parent=gene-LDO45_RS06375;Dbxref=GenBank:WP_059702145.1;Name=WP_059702145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601647.1;locus_tag=LDO45_RS06375;product=NAD(P)-dependent oxidoreductase;protein_id=WP_059702145.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 30145 30600 . - . ID=gene-LDO45_RS06380;Name=LDO45_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06380;old_locus_tag=BDI4_130027 NZ_CAJZAS010000035.1 Protein Homology CDS 30145 30600 . - 0 ID=cds-WP_175916896.1;Parent=gene-LDO45_RS06380;Dbxref=GenBank:WP_175916896.1;Name=WP_175916896.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351480.1;locus_tag=LDO45_RS06380;product=Rrf2 family transcriptional regulator;protein_id=WP_175916896.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 30692 31120 . - . ID=gene-LDO45_RS06385;Name=LDO45_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06385;old_locus_tag=BDI4_130028 NZ_CAJZAS010000035.1 Protein Homology CDS 30692 31120 . - 0 ID=cds-WP_059523609.1;Parent=gene-LDO45_RS06385;Dbxref=GenBank:WP_059523609.1;Name=WP_059523609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897553.1;locus_tag=LDO45_RS06385;product=hypothetical protein;protein_id=WP_059523609.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 31314 31649 . + . ID=gene-LDO45_RS06390;Name=LDO45_RS06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06390;old_locus_tag=BDI4_130029 NZ_CAJZAS010000035.1 Protein Homology CDS 31314 31649 . + 0 ID=cds-WP_059691126.1;Parent=gene-LDO45_RS06390;Dbxref=GenBank:WP_059691126.1;Name=WP_059691126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656423.1;locus_tag=LDO45_RS06390;product=hypothetical protein;protein_id=WP_059691126.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 31893 33086 . + . ID=gene-LDO45_RS06395;Name=LDO45_RS06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06395;old_locus_tag=BDI4_130030 NZ_CAJZAS010000035.1 Protein Homology CDS 31893 33086 . + 0 ID=cds-WP_059815895.1;Parent=gene-LDO45_RS06395;Dbxref=GenBank:WP_059815895.1;Name=WP_059815895.1;Ontology_term=GO:0072488,GO:0008519,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694238.1;locus_tag=LDO45_RS06395;product=ammonium transporter;protein_id=WP_059815895.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 33280 35238 . + . ID=gene-LDO45_RS06400;Name=LDO45_RS06400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06400;old_locus_tag=BDI4_130031 NZ_CAJZAS010000035.1 Protein Homology CDS 33280 35238 . + 0 ID=cds-WP_223960677.1;Parent=gene-LDO45_RS06400;Dbxref=GenBank:WP_223960677.1;Name=WP_223960677.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415668.1;locus_tag=LDO45_RS06400;product=PhoX family phosphatase;protein_id=WP_223960677.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 35801 36625 . + . ID=gene-LDO45_RS06405;Name=LDO45_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06405;old_locus_tag=BDI4_130033 NZ_CAJZAS010000035.1 Protein Homology CDS 35801 36625 . + 0 ID=cds-WP_059691123.1;Parent=gene-LDO45_RS06405;Dbxref=GenBank:WP_059691123.1;Name=WP_059691123.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884053.1;locus_tag=LDO45_RS06405;product=IclR family transcriptional regulator;protein_id=WP_059691123.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 36876 38246 . + . ID=gene-LDO45_RS06410;Name=LDO45_RS06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06410;old_locus_tag=BDI4_130034 NZ_CAJZAS010000035.1 Protein Homology CDS 36876 38246 . + 0 ID=cds-WP_223960679.1;Parent=gene-LDO45_RS06410;Dbxref=GenBank:WP_223960679.1;Name=WP_223960679.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694235.1;locus_tag=LDO45_RS06410;product=MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit;protein_id=WP_223960679.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 38262 41381 . + . ID=gene-LDO45_RS06415;Name=LDO45_RS06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06415;old_locus_tag=BDI4_130035 NZ_CAJZAS010000035.1 Protein Homology CDS 38262 41381 . + 0 ID=cds-WP_223960681.1;Parent=gene-LDO45_RS06415;Dbxref=GenBank:WP_223960681.1;Name=WP_223960681.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401193.1;locus_tag=LDO45_RS06415;product=MdtB/MuxB family multidrug efflux RND transporter permease subunit;protein_id=WP_223960681.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 41385 44693 . + . ID=gene-LDO45_RS06420;Name=LDO45_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06420;old_locus_tag=BDI4_130036 NZ_CAJZAS010000035.1 Protein Homology CDS 41385 44693 . + 0 ID=cds-WP_223960684.1;Parent=gene-LDO45_RS06420;Dbxref=GenBank:WP_223960684.1;Name=WP_223960684.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897587.1;locus_tag=LDO45_RS06420;product=efflux RND transporter permease subunit;protein_id=WP_223960684.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 44809 45192 . + . ID=gene-LDO45_RS06425;Name=LDO45_RS06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06425;old_locus_tag=BDI4_130037 NZ_CAJZAS010000035.1 Protein Homology CDS 44809 45192 . + 0 ID=cds-WP_059467132.1;Parent=gene-LDO45_RS06425;Dbxref=GenBank:WP_059467132.1;Name=WP_059467132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491250.1;locus_tag=LDO45_RS06425;product=VOC family protein;protein_id=WP_059467132.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq pseudogene 45277 46709 . - . ID=gene-LDO45_RS06430;Name=LDO45_RS06430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS06430;old_locus_tag=BDI4_130038;pseudo=true NZ_CAJZAS010000035.1 Protein Homology CDS 45277 46709 . - 0 ID=cds-LDO45_RS06430;Parent=gene-LDO45_RS06430;Note=frameshifted;Ontology_term=GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328187.1;locus_tag=LDO45_RS06430;product=NYN domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 46964 47593 . + . ID=gene-LDO45_RS06435;Name=LDO45_RS06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06435;old_locus_tag=BDI4_130040 NZ_CAJZAS010000035.1 Protein Homology CDS 46964 47593 . + 0 ID=cds-WP_059702160.1;Parent=gene-LDO45_RS06435;Dbxref=GenBank:WP_059702160.1;Name=WP_059702160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521880.1;locus_tag=LDO45_RS06435;product=SDR family oxidoreductase;protein_id=WP_059702160.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 47687 48238 . - . ID=gene-LDO45_RS06440;Name=LDO45_RS06440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06440;old_locus_tag=BDI4_130041 NZ_CAJZAS010000035.1 Protein Homology CDS 47687 48238 . - 0 ID=cds-WP_223960688.1;Parent=gene-LDO45_RS06440;Dbxref=GenBank:WP_223960688.1;Name=WP_223960688.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897592.1;locus_tag=LDO45_RS06440;product=peroxiredoxin;protein_id=WP_223960688.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 48518 50257 . + . ID=gene-LDO45_RS06445;Name=cdpA;gbkey=Gene;gene=cdpA;gene_biotype=protein_coding;locus_tag=LDO45_RS06445;old_locus_tag=BDI4_130042 NZ_CAJZAS010000035.1 Protein Homology CDS 48518 50257 . + 0 ID=cds-WP_218921644.1;Parent=gene-LDO45_RS06445;Dbxref=GenBank:WP_218921644.1;Name=WP_218921644.1;gbkey=CDS;gene=cdpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544994.1;locus_tag=LDO45_RS06445;product=cyclic di-GMP phosphodiesterase CdpA;protein_id=WP_218921644.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 50285 51790 . + . ID=gene-LDO45_RS06450;Name=LDO45_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06450;old_locus_tag=BDI4_130043 NZ_CAJZAS010000035.1 Protein Homology CDS 50285 51790 . + 0 ID=cds-WP_223960691.1;Parent=gene-LDO45_RS06450;Dbxref=GenBank:WP_223960691.1;Name=WP_223960691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656405.1;locus_tag=LDO45_RS06450;product=HDOD domain-containing protein;protein_id=WP_223960691.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 51861 52655 . - . ID=gene-LDO45_RS06455;Name=LDO45_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06455;old_locus_tag=BDI4_130044 NZ_CAJZAS010000035.1 Protein Homology CDS 51861 52655 . - 0 ID=cds-WP_059467138.1;Parent=gene-LDO45_RS06455;Dbxref=GenBank:WP_059467138.1;Name=WP_059467138.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025859.1;locus_tag=LDO45_RS06455;product=ABC transporter substrate-binding protein;protein_id=WP_059467138.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 53010 54059 . - . ID=gene-LDO45_RS06460;Name=astE;gbkey=Gene;gene=astE;gene_biotype=protein_coding;locus_tag=LDO45_RS06460;old_locus_tag=BDI4_130045 NZ_CAJZAS010000035.1 Protein Homology CDS 53010 54059 . - 0 ID=cds-WP_223960712.1;Parent=gene-LDO45_RS06460;Dbxref=GenBank:WP_223960712.1;Name=WP_223960712.1;Ontology_term=GO:0006527,GO:0008270,GO:0009017;gbkey=CDS;gene=astE;go_function=zinc ion binding|0008270||IEA,succinylglutamate desuccinylase activity|0009017||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328183.1;locus_tag=LDO45_RS06460;product=succinylglutamate desuccinylase;protein_id=WP_223960712.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 54067 55407 . - . ID=gene-LDO45_RS06465;Name=astB;gbkey=Gene;gene=astB;gene_biotype=protein_coding;locus_tag=LDO45_RS06465;old_locus_tag=BDI4_130046 NZ_CAJZAS010000035.1 Protein Homology CDS 54067 55407 . - 0 ID=cds-WP_223960693.1;Parent=gene-LDO45_RS06465;Dbxref=GenBank:WP_223960693.1;Name=WP_223960693.1;Ontology_term=GO:0006527,GO:0009015;gbkey=CDS;gene=astB;go_function=N-succinylarginine dihydrolase activity|0009015||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025855.1;locus_tag=LDO45_RS06465;product=N-succinylarginine dihydrolase;protein_id=WP_223960693.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 55422 56885 . - . ID=gene-LDO45_RS06470;Name=astD;gbkey=Gene;gene=astD;gene_biotype=protein_coding;locus_tag=LDO45_RS06470;old_locus_tag=BDI4_130047 NZ_CAJZAS010000035.1 Protein Homology CDS 55422 56885 . - 0 ID=cds-WP_223960695.1;Parent=gene-LDO45_RS06470;Dbxref=GenBank:WP_223960695.1;Name=WP_223960695.1;Ontology_term=GO:0006527,GO:0043824;gbkey=CDS;gene=astD;go_function=succinylglutamate-semialdehyde dehydrogenase activity|0043824||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656401.1;locus_tag=LDO45_RS06470;product=succinylglutamate-semialdehyde dehydrogenase;protein_id=WP_223960695.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 56893 57939 . - . ID=gene-LDO45_RS06475;Name=astA;gbkey=Gene;gene=astA;gene_biotype=protein_coding;locus_tag=LDO45_RS06475;old_locus_tag=BDI4_130048 NZ_CAJZAS010000035.1 Protein Homology CDS 56893 57939 . - 0 ID=cds-WP_059523644.1;Parent=gene-LDO45_RS06475;Dbxref=GenBank:WP_059523644.1;Name=WP_059523644.1;Ontology_term=GO:0006527,GO:0008791;gbkey=CDS;gene=astA;go_function=arginine N-succinyltransferase activity|0008791||IEA;go_process=arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009931289.1;locus_tag=LDO45_RS06475;product=arginine N-succinyltransferase;protein_id=WP_059523644.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 57936 59003 . - . ID=gene-LDO45_RS06480;Name=aruF;gbkey=Gene;gene=aruF;gene_biotype=protein_coding;locus_tag=LDO45_RS06480;old_locus_tag=BDI4_130049 NZ_CAJZAS010000035.1 Protein Homology CDS 57936 59003 . - 0 ID=cds-WP_223960697.1;Parent=gene-LDO45_RS06480;Dbxref=GenBank:WP_223960697.1;Name=WP_223960697.1;gbkey=CDS;gene=aruF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524646.1;locus_tag=LDO45_RS06480;product=arginine/ornithine succinyltransferase subunit alpha;protein_id=WP_223960697.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 59034 60266 . - . ID=gene-LDO45_RS06485;Name=LDO45_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06485;old_locus_tag=BDI4_130050 NZ_CAJZAS010000035.1 Protein Homology CDS 59034 60266 . - 0 ID=cds-WP_059523648.1;Parent=gene-LDO45_RS06485;Dbxref=GenBank:WP_059523648.1;Name=WP_059523648.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755011.1;locus_tag=LDO45_RS06485;product=aspartate aminotransferase family protein;protein_id=WP_059523648.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 60918 61499 . + . ID=gene-LDO45_RS06490;Name=LDO45_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06490;old_locus_tag=BDI4_130051 NZ_CAJZAS010000035.1 Protein Homology CDS 60918 61499 . + 0 ID=cds-WP_223960699.1;Parent=gene-LDO45_RS06490;Dbxref=GenBank:WP_223960699.1;Name=WP_223960699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656397.1;locus_tag=LDO45_RS06490;product=PAAR domain-containing protein;protein_id=WP_223960699.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 61492 62109 . + . ID=gene-LDO45_RS06495;Name=LDO45_RS06495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06495;old_locus_tag=BDI4_130052 NZ_CAJZAS010000035.1 Protein Homology CDS 61492 62109 . + 0 ID=cds-WP_223960700.1;Parent=gene-LDO45_RS06495;Dbxref=GenBank:WP_223960700.1;Name=WP_223960700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216349.1;locus_tag=LDO45_RS06495;product=type VI secretion system amidase effector protein Tae4;protein_id=WP_223960700.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 62106 62441 . + . ID=gene-LDO45_RS06500;Name=LDO45_RS06500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06500;old_locus_tag=BDI4_130053 NZ_CAJZAS010000035.1 Protein Homology CDS 62106 62441 . + 0 ID=cds-WP_223960702.1;Parent=gene-LDO45_RS06500;Dbxref=GenBank:WP_223960702.1;Name=WP_223960702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011002206.1;locus_tag=LDO45_RS06500;product=hypothetical protein;protein_id=WP_223960702.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 62842 63885 . - . ID=gene-LDO45_RS06505;Name=LDO45_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06505;old_locus_tag=BDI4_130054 NZ_CAJZAS010000035.1 Protein Homology CDS 62842 63885 . - 0 ID=cds-WP_059691111.1;Parent=gene-LDO45_RS06505;Dbxref=GenBank:WP_059691111.1;Name=WP_059691111.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897602.1;locus_tag=LDO45_RS06505;product=GlxA family transcriptional regulator;protein_id=WP_059691111.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 63907 64707 . - . ID=gene-LDO45_RS06510;Name=LDO45_RS06510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06510;old_locus_tag=BDI4_130055 NZ_CAJZAS010000035.1 Protein Homology CDS 63907 64707 . - 0 ID=cds-WP_006488736.1;Parent=gene-LDO45_RS06510;Dbxref=GenBank:WP_006488736.1;Name=WP_006488736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254933.1;locus_tag=LDO45_RS06510;product=ABC transporter ATP-binding protein;protein_id=WP_006488736.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 64729 65442 . - . ID=gene-LDO45_RS06515;Name=LDO45_RS06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06515;old_locus_tag=BDI4_130056 NZ_CAJZAS010000035.1 Protein Homology CDS 64729 65442 . - 0 ID=cds-WP_059447650.1;Parent=gene-LDO45_RS06515;Dbxref=GenBank:WP_059447650.1;Name=WP_059447650.1;Ontology_term=GO:0022857,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424506.1;locus_tag=LDO45_RS06515;product=ABC transporter permease;protein_id=WP_059447650.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 65439 66128 . - . ID=gene-LDO45_RS06520;Name=LDO45_RS06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06520;old_locus_tag=BDI4_130057 NZ_CAJZAS010000035.1 Protein Homology CDS 65439 66128 . - 0 ID=cds-WP_059523652.1;Parent=gene-LDO45_RS06520;Dbxref=GenBank:WP_059523652.1;Name=WP_059523652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527442.1;locus_tag=LDO45_RS06520;product=ABC transporter permease;protein_id=WP_059523652.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 66394 66951 . - . ID=gene-LDO45_RS06525;Name=LDO45_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06525;old_locus_tag=BDI4_130058 NZ_CAJZAS010000035.1 Protein Homology CDS 66394 66951 . - 0 ID=cds-WP_059691110.1;Parent=gene-LDO45_RS06525;Dbxref=GenBank:WP_059691110.1;Name=WP_059691110.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333215.1;locus_tag=LDO45_RS06525;product=hypothetical protein;protein_id=WP_059691110.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 67039 68079 . - . ID=gene-LDO45_RS06530;Name=LDO45_RS06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06530;old_locus_tag=BDI4_130059 NZ_CAJZAS010000035.1 Protein Homology CDS 67039 68079 . - 0 ID=cds-WP_059691109.1;Parent=gene-LDO45_RS06530;Dbxref=GenBank:WP_059691109.1;Name=WP_059691109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213764.1;locus_tag=LDO45_RS06530;product=HpnL family protein;protein_id=WP_059691109.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 68076 68960 . - . ID=gene-LDO45_RS06535;Name=hpnK;gbkey=Gene;gene=hpnK;gene_biotype=protein_coding;locus_tag=LDO45_RS06535;old_locus_tag=BDI4_130060 NZ_CAJZAS010000035.1 Protein Homology CDS 68076 68960 . - 0 ID=cds-WP_059691108.1;Parent=gene-LDO45_RS06535;Dbxref=GenBank:WP_059691108.1;Name=WP_059691108.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=hpnK;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401218.1;locus_tag=LDO45_RS06535;product=hopanoid biosynthesis-associated protein HpnK;protein_id=WP_059691108.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 68964 70406 . - . ID=gene-LDO45_RS06540;Name=hpnJ;gbkey=Gene;gene=hpnJ;gene_biotype=protein_coding;locus_tag=LDO45_RS06540;old_locus_tag=BDI4_130061 NZ_CAJZAS010000035.1 Protein Homology CDS 68964 70406 . - 0 ID=cds-WP_306426965.1;Parent=gene-LDO45_RS06540;Dbxref=GenBank:WP_306426965.1;Name=WP_306426965.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;gene=hpnJ;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722751.1;locus_tag=LDO45_RS06540;product=hopanoid biosynthesis associated radical SAM protein HpnJ;protein_id=WP_306426965.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 70573 71748 . - . ID=gene-LDO45_RS06545;Name=hpnI;gbkey=Gene;gene=hpnI;gene_biotype=protein_coding;locus_tag=LDO45_RS06545;old_locus_tag=BDI4_130062 NZ_CAJZAS010000035.1 Protein Homology CDS 70573 71748 . - 0 ID=cds-WP_059691107.1;Parent=gene-LDO45_RS06545;Dbxref=GenBank:WP_059691107.1;Name=WP_059691107.1;Ontology_term=GO:0016757;gbkey=CDS;gene=hpnI;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897610.1;locus_tag=LDO45_RS06545;product=bacteriohopanetetrol glucosamine biosynthesis glycosyltransferase HpnI;protein_id=WP_059691107.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 72391 73389 . + . ID=gene-LDO45_RS06550;Name=LDO45_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06550;old_locus_tag=BDI4_130064 NZ_CAJZAS010000035.1 Protein Homology CDS 72391 73389 . + 0 ID=cds-WP_223960704.1;Parent=gene-LDO45_RS06550;Dbxref=GenBank:WP_223960704.1;Name=WP_223960704.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656385.1;locus_tag=LDO45_RS06550;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_223960704.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 73415 74476 . - . ID=gene-LDO45_RS06555;Name=LDO45_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06555;old_locus_tag=BDI4_130065 NZ_CAJZAS010000035.1 Protein Homology CDS 73415 74476 . - 0 ID=cds-WP_059523662.1;Parent=gene-LDO45_RS06555;Dbxref=GenBank:WP_059523662.1;Name=WP_059523662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351448.1;locus_tag=LDO45_RS06555;product=alpha/beta fold hydrolase;protein_id=WP_059523662.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 74651 75511 . + . ID=gene-LDO45_RS06560;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=LDO45_RS06560;old_locus_tag=BDI4_130066 NZ_CAJZAS010000035.1 Protein Homology CDS 74651 75511 . + 0 ID=cds-WP_059523664.1;Parent=gene-LDO45_RS06560;Dbxref=GenBank:WP_059523664.1;Name=WP_059523664.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884000.1;locus_tag=LDO45_RS06560;product=pyridoxal kinase PdxY;protein_id=WP_059523664.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 75846 77990 . + . ID=gene-LDO45_RS06565;Name=LDO45_RS06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06565;old_locus_tag=BDI4_130067 NZ_CAJZAS010000035.1 Protein Homology CDS 75846 77990 . + 0 ID=cds-WP_223960706.1;Parent=gene-LDO45_RS06565;Dbxref=GenBank:WP_223960706.1;Name=WP_223960706.1;Ontology_term=GO:0034480;gbkey=CDS;go_function=phosphatidylcholine phospholipase C activity|0034480||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484309.1;locus_tag=LDO45_RS06565;product=phosphocholine-specific phospholipase C;protein_id=WP_223960706.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 78364 79512 . + . ID=gene-LDO45_RS06570;Name=LDO45_RS06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06570;old_locus_tag=BDI4_130070 NZ_CAJZAS010000035.1 Protein Homology CDS 78364 79512 . + 0 ID=cds-WP_059691105.1;Parent=gene-LDO45_RS06570;Dbxref=GenBank:WP_059691105.1;Name=WP_059691105.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497706.1;locus_tag=LDO45_RS06570;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_059691105.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 79719 80480 . - . ID=gene-LDO45_RS06575;Name=LDO45_RS06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06575;old_locus_tag=BDI4_130071 NZ_CAJZAS010000035.1 Protein Homology CDS 79719 80480 . - 0 ID=cds-WP_059465220.1;Parent=gene-LDO45_RS06575;Dbxref=GenBank:WP_059465220.1;Name=WP_059465220.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401228.1;locus_tag=LDO45_RS06575;product=FadR/GntR family transcriptional regulator;protein_id=WP_059465220.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 80906 82258 . + . ID=gene-LDO45_RS06580;Name=gudD;gbkey=Gene;gene=gudD;gene_biotype=protein_coding;locus_tag=LDO45_RS06580;old_locus_tag=BDI4_130072 NZ_CAJZAS010000035.1 Protein Homology CDS 80906 82258 . + 0 ID=cds-WP_059523670.1;Parent=gene-LDO45_RS06580;Dbxref=GenBank:WP_059523670.1;Name=WP_059523670.1;Ontology_term=GO:0019394,GO:0000287,GO:0008872;gbkey=CDS;gene=gudD;go_function=magnesium ion binding|0000287||IEA,glucarate dehydratase activity|0008872||IEA;go_process=glucarate catabolic process|0019394||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764752.1;locus_tag=LDO45_RS06580;product=glucarate dehydratase;protein_id=WP_059523670.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 82300 82764 . - . ID=gene-LDO45_RS06585;Name=LDO45_RS06585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06585;old_locus_tag=BDI4_130073 NZ_CAJZAS010000035.1 Protein Homology CDS 82300 82764 . - 0 ID=cds-WP_223960708.1;Parent=gene-LDO45_RS06585;Dbxref=GenBank:WP_223960708.1;Name=WP_223960708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476457.1;locus_tag=LDO45_RS06585;product=DUF2214 family protein;protein_id=WP_223960708.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 82802 83602 . - . ID=gene-LDO45_RS06590;Name=LDO45_RS06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06590;old_locus_tag=BDI4_130074 NZ_CAJZAS010000035.1 Protein Homology CDS 82802 83602 . - 0 ID=cds-WP_223960710.1;Parent=gene-LDO45_RS06590;Dbxref=GenBank:WP_223960710.1;Name=WP_223960710.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751848.1;locus_tag=LDO45_RS06590;product=hypothetical protein;protein_id=WP_223960710.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 83839 84903 . - . ID=gene-LDO45_RS06595;Name=LDO45_RS06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06595;old_locus_tag=BDI4_130075 NZ_CAJZAS010000035.1 Protein Homology CDS 83839 84903 . - 0 ID=cds-WP_059523676.1;Parent=gene-LDO45_RS06595;Dbxref=GenBank:WP_059523676.1;Name=WP_059523676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476459.1;locus_tag=LDO45_RS06595;product=glycosyltransferase family 4 protein;protein_id=WP_059523676.1;transl_table=11 NZ_CAJZAS010000035.1 RefSeq gene 85465 87294 . + . ID=gene-LDO45_RS06600;Name=LDO45_RS06600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06600;old_locus_tag=BDI4_130076 NZ_CAJZAS010000035.1 Protein Homology CDS 85465 87294 . + 0 ID=cds-WP_059523678.1;Parent=gene-LDO45_RS06600;Dbxref=GenBank:WP_059523678.1;Name=WP_059523678.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401234.1;locus_tag=LDO45_RS06600;product=ABC transporter ATP-binding protein;protein_id=WP_059523678.1;transl_table=11 ##sequence-region NZ_CAJZAS010000036.1 1 1136 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000036.1 RefSeq region 1 1136 . + . ID=NZ_CAJZAS010000036.1:1..1136;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_130 NZ_CAJZAS010000036.1 RefSeq gene 530 706 . - . ID=gene-LDO45_RS34495;Name=LDO45_RS34495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34495;old_locus_tag=BDI4_1300004 NZ_CAJZAS010000036.1 Protein Homology CDS 530 706 . - 0 ID=cds-WP_374109516.1;Parent=gene-LDO45_RS34495;Dbxref=GenBank:WP_374109516.1;Name=WP_374109516.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024835.5;locus_tag=LDO45_RS34495;product=hypothetical protein;protein_id=WP_374109516.1;transl_table=11 NZ_CAJZAS010000036.1 RefSeq pseudogene 801 1097 . - . ID=gene-LDO45_RS06610;Name=LDO45_RS06610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS06610;old_locus_tag=BDI4_1300005;partial=true;pseudo=true;start_range=.,801 NZ_CAJZAS010000036.1 Protein Homology CDS 801 1097 . - 0 ID=cds-LDO45_RS06610;Parent=gene-LDO45_RS06610;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF013540.5;locus_tag=LDO45_RS06610;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,801;transl_table=11 ##sequence-region NZ_CAJZAS010000037.1 1 12956 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000037.1 RefSeq region 1 12956 . + . ID=NZ_CAJZAS010000037.1:1..12956;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_131 NZ_CAJZAS010000037.1 RefSeq pseudogene 1 162 . - . ID=gene-LDO45_RS06615;Name=LDO45_RS06615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS06615;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000037.1 Protein Homology CDS 1 162 . - 0 ID=cds-LDO45_RS06615;Parent=gene-LDO45_RS06615;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526314.1;locus_tag=LDO45_RS06615;partial=true;product=cobalamin biosynthesis protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000037.1 RefSeq gene 156 716 . - . ID=gene-LDO45_RS06620;Name=cobU;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=LDO45_RS06620;old_locus_tag=BDI4_1310002 NZ_CAJZAS010000037.1 Protein Homology CDS 156 716 . - 0 ID=cds-WP_059528305.1;Parent=gene-LDO45_RS06620;Dbxref=GenBank:WP_059528305.1;Name=WP_059528305.1;Ontology_term=GO:0009236,GO:0000166,GO:0043752;gbkey=CDS;gene=cobU;go_function=nucleotide binding|0000166||IEA,adenosylcobinamide kinase activity|0043752||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364467.1;locus_tag=LDO45_RS06620;product=bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase;protein_id=WP_059528305.1;transl_table=11 NZ_CAJZAS010000037.1 RefSeq gene 792 2294 . + . ID=gene-LDO45_RS06625;Name=LDO45_RS06625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06625;old_locus_tag=BDI4_1310003 NZ_CAJZAS010000037.1 Protein Homology CDS 792 2294 . + 0 ID=cds-WP_223960717.1;Parent=gene-LDO45_RS06625;Dbxref=GenBank:WP_223960717.1;Name=WP_223960717.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657662.1;locus_tag=LDO45_RS06625;product=cobyric acid synthase;protein_id=WP_223960717.1;transl_table=11 NZ_CAJZAS010000037.1 RefSeq gene 2377 2517 . + . ID=gene-LDO45_RS06630;Name=LDO45_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06630 NZ_CAJZAS010000037.1 Protein Homology CDS 2377 2517 . + 0 ID=cds-WP_179949187.1;Parent=gene-LDO45_RS06630;Dbxref=GenBank:WP_179949187.1;Name=WP_179949187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364465.1;locus_tag=LDO45_RS06630;product=hypothetical protein;protein_id=WP_179949187.1;transl_table=11 NZ_CAJZAS010000037.1 RefSeq gene 2682 3095 . + . ID=gene-LDO45_RS06635;Name=LDO45_RS06635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06635;old_locus_tag=BDI4_1310004 NZ_CAJZAS010000037.1 Protein Homology CDS 2682 3095 . + 0 ID=cds-WP_059528303.1;Parent=gene-LDO45_RS06635;Dbxref=GenBank:WP_059528303.1;Name=WP_059528303.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761257.1;locus_tag=LDO45_RS06635;product=DoxX family protein;protein_id=WP_059528303.1;transl_table=11 NZ_CAJZAS010000037.1 RefSeq gene 3224 3883 . + . ID=gene-LDO45_RS06640;Name=LDO45_RS06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06640;old_locus_tag=BDI4_1310005 NZ_CAJZAS010000037.1 Protein Homology CDS 3224 3883 . + 0 ID=cds-WP_059527575.1;Parent=gene-LDO45_RS06640;Dbxref=GenBank:WP_059527575.1;Name=WP_059527575.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212899.1;locus_tag=LDO45_RS06640;product=ParA family protein;protein_id=WP_059527575.1;transl_table=11 NZ_CAJZAS010000037.1 RefSeq gene 4010 4396 . - . ID=gene-LDO45_RS06645;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=LDO45_RS06645;old_locus_tag=BDI4_1310006 NZ_CAJZAS010000037.1 Protein Homology CDS 4010 4396 . - 0 ID=cds-WP_006484038.1;Parent=gene-LDO45_RS06645;Dbxref=GenBank:WP_006484038.1;Name=WP_006484038.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006048527.1;locus_tag=LDO45_RS06645;product=aspartate 1-decarboxylase;protein_id=WP_006484038.1;transl_table=11 NZ_CAJZAS010000037.1 RefSeq gene 4438 5277 . - . ID=gene-LDO45_RS06650;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=LDO45_RS06650;old_locus_tag=BDI4_1310007 NZ_CAJZAS010000037.1 Protein Homology CDS 4438 5277 . - 0 ID=cds-WP_059528301.1;Parent=gene-LDO45_RS06650;Dbxref=GenBank:WP_059528301.1;Name=WP_059528301.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352891.1;locus_tag=LDO45_RS06650;product=pantoate--beta-alanine ligase;protein_id=WP_059528301.1;transl_table=11 NZ_CAJZAS010000037.1 RefSeq gene 5537 6409 . - . ID=gene-LDO45_RS06655;Name=LDO45_RS06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06655;old_locus_tag=BDI4_1310008 NZ_CAJZAS010000037.1 Protein Homology CDS 5537 6409 . - 0 ID=cds-WP_059527573.1;Parent=gene-LDO45_RS06655;Dbxref=GenBank:WP_059527573.1;Name=WP_059527573.1;Ontology_term=GO:0007059,GO:0051301;gbkey=CDS;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102217.1;locus_tag=LDO45_RS06655;product=ScpA family protein;protein_id=WP_059527573.1;transl_table=11 NZ_CAJZAS010000037.1 RefSeq gene 6414 6602 . - . ID=gene-LDO45_RS06660;Name=LDO45_RS06660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06660;old_locus_tag=BDI4_1310009 NZ_CAJZAS010000037.1 Protein Homology CDS 6414 6602 . - 0 ID=cds-WP_044849219.1;Parent=gene-LDO45_RS06660;Dbxref=GenBank:WP_044849219.1;Name=WP_044849219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333879.1;locus_tag=LDO45_RS06660;product=DUF3460 family protein;protein_id=WP_044849219.1;transl_table=11 NZ_CAJZAS010000037.1 RefSeq gene 6856 8682 . + . ID=gene-LDO45_RS06665;Name=LDO45_RS06665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06665;old_locus_tag=BDI4_1310010 NZ_CAJZAS010000037.1 Protein Homology CDS 6856 8682 . + 0 ID=cds-WP_059527570.1;Parent=gene-LDO45_RS06665;Dbxref=GenBank:WP_059527570.1;Name=WP_059527570.1;Ontology_term=GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405825.1;locus_tag=LDO45_RS06665;product=autotransporter assembly complex family protein;protein_id=WP_059527570.1;transl_table=11 NZ_CAJZAS010000037.1 RefSeq gene 8711 12766 . + . ID=gene-LDO45_RS06670;Name=LDO45_RS06670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06670;old_locus_tag=BDI4_1310011 NZ_CAJZAS010000037.1 Protein Homology CDS 8711 12766 . + 0 ID=cds-WP_223960719.1;Parent=gene-LDO45_RS06670;Dbxref=GenBank:WP_223960719.1;Name=WP_223960719.1;Ontology_term=GO:0009306,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478109.1;locus_tag=LDO45_RS06670;product=translocation/assembly module TamB domain-containing protein;protein_id=WP_223960719.1;transl_table=11 NZ_CAJZAS010000037.1 RefSeq gene 12873 12956 . - . ID=gene-LDO45_RS34500;Name=LDO45_RS34500;end_range=12956,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34500;partial=true NZ_CAJZAS010000037.1 Protein Homology CDS 12873 12956 . - 0 ID=cds-WP_374109517.1;Parent=gene-LDO45_RS34500;Dbxref=GenBank:WP_374109517.1;Name=WP_374109517.1;Ontology_term=GO:0015074;end_range=12956,.;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF024729.5;locus_tag=LDO45_RS34500;partial=true;product=IS3 family transposase;protein_id=WP_374109517.1;transl_table=11 ##sequence-region NZ_CAJZAS010000038.1 1 11286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000038.1 RefSeq region 1 11286 . + . ID=NZ_CAJZAS010000038.1:1..11286;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_132 NZ_CAJZAS010000038.1 RefSeq pseudogene 1 7702 . - . ID=gene-LDO45_RS06675;Name=LDO45_RS06675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS06675;old_locus_tag=BDI4_1320002;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000038.1 Protein Homology CDS 1 7702 . - 0 ID=cds-LDO45_RS06675;Parent=gene-LDO45_RS06675;Note=too many ambiguous residues%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366089.1;locus_tag=LDO45_RS06675;partial=true;product=DUF4781 domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000038.1 RefSeq gene 8113 9369 . + . ID=gene-LDO45_RS06680;Name=LDO45_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06680;old_locus_tag=BDI4_1320003 NZ_CAJZAS010000038.1 Protein Homology CDS 8113 9369 . + 0 ID=cds-WP_223960721.1;Parent=gene-LDO45_RS06680;Dbxref=GenBank:WP_223960721.1;Name=WP_223960721.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366090.1;locus_tag=LDO45_RS06680;product=porin;protein_id=WP_223960721.1;transl_table=11 NZ_CAJZAS010000038.1 RefSeq gene 9701 10192 . + . ID=gene-LDO45_RS06685;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=LDO45_RS06685;old_locus_tag=BDI4_1320004 NZ_CAJZAS010000038.1 Protein Homology CDS 9701 10192 . + 0 ID=cds-WP_059468012.1;Parent=gene-LDO45_RS06685;Dbxref=GenBank:WP_059468012.1;Name=WP_059468012.1;Ontology_term=GO:0009279;gbkey=CDS;gene=pal;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409874.1;locus_tag=LDO45_RS06685;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_059468012.1;transl_table=11 NZ_CAJZAS010000038.1 RefSeq gene 10432 10602 . + . ID=gene-LDO45_RS06690;Name=LDO45_RS06690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06690;old_locus_tag=BDI4_1320006 NZ_CAJZAS010000038.1 Protein Homology CDS 10432 10602 . + 0 ID=cds-WP_175906937.1;Parent=gene-LDO45_RS06690;Dbxref=GenBank:WP_175906937.1;Name=WP_175906937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899342.1;locus_tag=LDO45_RS06690;product=hypothetical protein;protein_id=WP_175906937.1;transl_table=11 NZ_CAJZAS010000038.1 RefSeq gene 10695 11286 . - . ID=gene-LDO45_RS06695;Name=LDO45_RS06695;end_range=11286,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06695;old_locus_tag=BDI4_1320007;partial=true NZ_CAJZAS010000038.1 Protein Homology CDS 10695 11286 . - 1 ID=cds-WP_223960723.1;Parent=gene-LDO45_RS06695;Dbxref=GenBank:WP_223960723.1;Name=WP_223960723.1;end_range=11286,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759871.1;locus_tag=LDO45_RS06695;partial=true;product=cytochrome c;protein_id=WP_223960723.1;transl_table=11 ##sequence-region NZ_CAJZAS010000039.1 1 6705 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000039.1 RefSeq region 1 6705 . + . ID=NZ_CAJZAS010000039.1:1..6705;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_133 NZ_CAJZAS010000039.1 RefSeq pseudogene 69 355 . + . ID=gene-LDO45_RS06700;Name=LDO45_RS06700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS06700;old_locus_tag=BDI4_1330001;pseudo=true NZ_CAJZAS010000039.1 Protein Homology CDS 69 355 . + 0 ID=cds-LDO45_RS06700;Parent=gene-LDO45_RS06700;Note=frameshifted%3B too many ambiguous residues;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658433.1;locus_tag=LDO45_RS06700;product=hydrogenase maturation factor;pseudo=true;transl_table=11 NZ_CAJZAS010000039.1 RefSeq gene 406 618 . - . ID=gene-LDO45_RS06705;Name=LDO45_RS06705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06705;old_locus_tag=BDI4_1330002 NZ_CAJZAS010000039.1 Protein Homology CDS 406 618 . - 0 ID=cds-WP_059524815.1;Parent=gene-LDO45_RS06705;Dbxref=GenBank:WP_059524815.1;Name=WP_059524815.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899787.1;locus_tag=LDO45_RS06705;product=hypothetical protein;protein_id=WP_059524815.1;transl_table=11 NZ_CAJZAS010000039.1 RefSeq pseudogene 1048 1676 . + . ID=gene-LDO45_RS06710;Name=LDO45_RS06710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS06710;partial=true;pseudo=true;start_range=.,1048 NZ_CAJZAS010000039.1 Protein Homology CDS 1048 1676 . + 0 ID=cds-LDO45_RS06710;Parent=gene-LDO45_RS06710;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011850889.1;locus_tag=LDO45_RS06710;partial=true;product=DUF4382 domain-containing protein;pseudo=true;start_range=.,1048;transl_table=11 NZ_CAJZAS010000039.1 RefSeq gene 2249 3467 . + . ID=gene-LDO45_RS34095;Name=LDO45_RS34095;end_range=3467,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34095;old_locus_tag=BDI4_1330005;partial=true NZ_CAJZAS010000039.1 Protein Homology CDS 2249 3467 . + 0 ID=cds-WP_253074724.1;Parent=gene-LDO45_RS34095;Dbxref=GenBank:WP_253074724.1;Name=WP_253074724.1;end_range=3467,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037611.5;locus_tag=LDO45_RS34095;partial=true;product=glycoside hydrolase domain-containing protein;protein_id=WP_253074724.1;transl_table=11 NZ_CAJZAS010000039.1 RefSeq gene 3486 4583 . + . ID=gene-LDO45_RS34100;Name=LDO45_RS34100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34100;old_locus_tag=BDI4_1330006 NZ_CAJZAS010000039.1 Protein Homology CDS 3486 4583 . + 0 ID=cds-WP_253074725.1;Parent=gene-LDO45_RS34100;Dbxref=GenBank:WP_253074725.1;Name=WP_253074725.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019583.5;locus_tag=LDO45_RS34100;product=glycoside hydrolase domain-containing protein;protein_id=WP_253074725.1;transl_table=11 NZ_CAJZAS010000039.1 RefSeq gene 4588 4812 . - . ID=gene-LDO45_RS06720;Name=LDO45_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06720 NZ_CAJZAS010000039.1 GeneMarkS-2+ CDS 4588 4812 . - 0 ID=cds-WP_223960725.1;Parent=gene-LDO45_RS06720;Dbxref=GenBank:WP_223960725.1;Name=WP_223960725.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS06720;product=hypothetical protein;protein_id=WP_223960725.1;transl_table=11 NZ_CAJZAS010000039.1 RefSeq gene 4838 5584 . + . ID=gene-LDO45_RS06725;Name=LDO45_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06725;old_locus_tag=BDI4_1330007 NZ_CAJZAS010000039.1 GeneMarkS-2+ CDS 4838 5584 . + 0 ID=cds-WP_223960727.1;Parent=gene-LDO45_RS06725;Dbxref=GenBank:WP_223960727.1;Name=WP_223960727.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS06725;product=hypothetical protein;protein_id=WP_223960727.1;transl_table=11 NZ_CAJZAS010000039.1 RefSeq gene 5596 5928 . + . ID=gene-LDO45_RS06730;Name=LDO45_RS06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06730;old_locus_tag=BDI4_1330008 NZ_CAJZAS010000039.1 Protein Homology CDS 5596 5928 . + 0 ID=cds-WP_223960728.1;Parent=gene-LDO45_RS06730;Dbxref=GenBank:WP_223960728.1;Name=WP_223960728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495295.1;locus_tag=LDO45_RS06730;product=hypothetical protein;protein_id=WP_223960728.1;transl_table=11 NZ_CAJZAS010000039.1 RefSeq pseudogene 5930 6315 . - . ID=gene-LDO45_RS06735;Name=LDO45_RS06735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS06735;pseudo=true NZ_CAJZAS010000039.1 Protein Homology CDS 5930 6315 . - 0 ID=cds-LDO45_RS06735;Parent=gene-LDO45_RS06735;Note=frameshifted%3B too many ambiguous residues;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008923515.1;locus_tag=LDO45_RS06735;product=DUF4337 family protein;pseudo=true;transl_table=11 NZ_CAJZAS010000039.1 RefSeq pseudogene 6216 6705 . - . ID=gene-LDO45_RS06740;Name=LDO45_RS06740;end_range=6705,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS06740;partial=true;pseudo=true NZ_CAJZAS010000039.1 GeneMarkS-2+ CDS 6216 6705 . - 1 ID=cds-LDO45_RS06740;Parent=gene-LDO45_RS06740;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=6705,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS06740;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000040.1 1 622 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000040.1 RefSeq region 1 622 . + . ID=NZ_CAJZAS010000040.1:1..622;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_134 NZ_CAJZAS010000040.1 RefSeq gene 1 224 . - . ID=gene-LDO45_RS34210;Name=LDO45_RS34210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34210;partial=true;start_range=.,1 NZ_CAJZAS010000040.1 GeneMarkS-2+ CDS 1 224 . - 0 ID=cds-WP_290370999.1;Parent=gene-LDO45_RS34210;Dbxref=GenBank:WP_290370999.1;Name=WP_290370999.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34210;partial=true;product=hypothetical protein;protein_id=WP_290370999.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000040.1 RefSeq pseudogene 124 622 . + . ID=gene-LDO45_RS06745;Name=LDO45_RS06745;end_range=622,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS06745;partial=true;pseudo=true NZ_CAJZAS010000040.1 Protein Homology CDS 124 622 . + 0 ID=cds-LDO45_RS06745;Parent=gene-LDO45_RS06745;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=622,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017472.5;locus_tag=LDO45_RS06745;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000041.1 1 17182 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000041.1 RefSeq region 1 17182 . + . ID=NZ_CAJZAS010000041.1:1..17182;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_135 NZ_CAJZAS010000041.1 RefSeq pseudogene 1 475 . + . ID=gene-LDO45_RS06750;Name=LDO45_RS06750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS06750;old_locus_tag=BDI4_1350001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000041.1 Protein Homology CDS 1 475 . + 1 ID=cds-LDO45_RS06750;Parent=gene-LDO45_RS06750;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490616.1;locus_tag=LDO45_RS06750;partial=true;product=lytic transglycosylase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000041.1 RefSeq gene 497 832 . - . ID=gene-LDO45_RS06755;Name=LDO45_RS06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06755;old_locus_tag=BDI4_1350002 NZ_CAJZAS010000041.1 Protein Homology CDS 497 832 . - 0 ID=cds-WP_059523359.1;Parent=gene-LDO45_RS06755;Dbxref=GenBank:WP_059523359.1;Name=WP_059523359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492516.1;locus_tag=LDO45_RS06755;product=hypothetical protein;protein_id=WP_059523359.1;transl_table=11 NZ_CAJZAS010000041.1 RefSeq gene 1111 1857 . - . ID=gene-LDO45_RS06760;Name=LDO45_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06760;old_locus_tag=BDI4_1350004 NZ_CAJZAS010000041.1 Protein Homology CDS 1111 1857 . - 0 ID=cds-WP_059523361.1;Parent=gene-LDO45_RS06760;Dbxref=GenBank:WP_059523361.1;Name=WP_059523361.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897364.1;locus_tag=LDO45_RS06760;product=MipA/OmpV family protein;protein_id=WP_059523361.1;transl_table=11 NZ_CAJZAS010000041.1 RefSeq gene 2103 2831 . + . ID=gene-LDO45_RS06765;Name=LDO45_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06765;old_locus_tag=BDI4_1350005 NZ_CAJZAS010000041.1 Protein Homology CDS 2103 2831 . + 0 ID=cds-WP_059523362.1;Parent=gene-LDO45_RS06765;Dbxref=GenBank:WP_059523362.1;Name=WP_059523362.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523775.1;locus_tag=LDO45_RS06765;product=response regulator;protein_id=WP_059523362.1;transl_table=11 NZ_CAJZAS010000041.1 RefSeq gene 2832 4199 . + . ID=gene-LDO45_RS06770;Name=LDO45_RS06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06770;old_locus_tag=BDI4_1350006 NZ_CAJZAS010000041.1 Protein Homology CDS 2832 4199 . + 0 ID=cds-WP_223960732.1;Parent=gene-LDO45_RS06770;Dbxref=GenBank:WP_223960732.1;Name=WP_223960732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363611.1;locus_tag=LDO45_RS06770;product=ATP-binding protein;protein_id=WP_223960732.1;transl_table=11 NZ_CAJZAS010000041.1 RefSeq gene 4229 4672 . - . ID=gene-LDO45_RS06775;Name=LDO45_RS06775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06775;old_locus_tag=BDI4_1350007 NZ_CAJZAS010000041.1 Protein Homology CDS 4229 4672 . - 0 ID=cds-WP_223960750.1;Parent=gene-LDO45_RS06775;Dbxref=GenBank:WP_223960750.1;Name=WP_223960750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545128.1;locus_tag=LDO45_RS06775;product=nuclear transport factor 2 family protein;protein_id=WP_223960750.1;transl_table=11 NZ_CAJZAS010000041.1 RefSeq gene 4758 5738 . - . ID=gene-LDO45_RS06780;Name=LDO45_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06780;old_locus_tag=BDI4_1350008 NZ_CAJZAS010000041.1 Protein Homology CDS 4758 5738 . - 0 ID=cds-WP_223960734.1;Parent=gene-LDO45_RS06780;Dbxref=GenBank:WP_223960734.1;Name=WP_223960734.1;Ontology_term=GO:0003960,GO:0016491,GO:0048038,GO:0070402;gbkey=CDS;go_function=NADPH:quinone reductase activity|0003960||IEA,oxidoreductase activity|0016491||IEA,quinone binding|0048038||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405037.1;locus_tag=LDO45_RS06780;product=NADPH:quinone oxidoreductase family protein;protein_id=WP_223960734.1;transl_table=11 NZ_CAJZAS010000041.1 RefSeq pseudogene 5851 6015 . - . ID=gene-LDO45_RS06785;Name=LDO45_RS06785;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS06785;old_locus_tag=BDI4_1350009;partial=true;pseudo=true;start_range=.,5851 NZ_CAJZAS010000041.1 Protein Homology CDS 5851 6015 . - 0 ID=cds-LDO45_RS06785;Parent=gene-LDO45_RS06785;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754737.1;locus_tag=LDO45_RS06785;partial=true;product=acyl-CoA dehydrogenase N-terminal domain-containing protein;pseudo=true;start_range=.,5851;transl_table=11 NZ_CAJZAS010000041.1 RefSeq gene 6223 6957 . - . ID=gene-LDO45_RS06790;Name=LDO45_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06790;old_locus_tag=BDI4_1350010 NZ_CAJZAS010000041.1 Protein Homology CDS 6223 6957 . - 0 ID=cds-WP_223960736.1;Parent=gene-LDO45_RS06790;Dbxref=GenBank:WP_223960736.1;Name=WP_223960736.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881887.1;locus_tag=LDO45_RS06790;product=winged helix-turn-helix domain-containing protein;protein_id=WP_223960736.1;transl_table=11 NZ_CAJZAS010000041.1 RefSeq gene 7075 7812 . - . ID=gene-LDO45_RS06795;Name=LDO45_RS06795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06795;old_locus_tag=BDI4_1350011 NZ_CAJZAS010000041.1 Protein Homology CDS 7075 7812 . - 0 ID=cds-WP_059523369.1;Parent=gene-LDO45_RS06795;Dbxref=GenBank:WP_059523369.1;Name=WP_059523369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881886.1;locus_tag=LDO45_RS06795;product=TenA family transcriptional regulator;protein_id=WP_059523369.1;transl_table=11 NZ_CAJZAS010000041.1 RefSeq gene 7832 10231 . - . ID=gene-LDO45_RS06800;Name=LDO45_RS06800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06800;old_locus_tag=BDI4_1350012 NZ_CAJZAS010000041.1 Protein Homology CDS 7832 10231 . - 0 ID=cds-WP_059700626.1;Parent=gene-LDO45_RS06800;Dbxref=GenBank:WP_059700626.1;Name=WP_059700626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881885.1;locus_tag=LDO45_RS06800;product=bifunctional diguanylate cyclase/phosphodiesterase;protein_id=WP_059700626.1;transl_table=11 NZ_CAJZAS010000041.1 RefSeq gene 10371 11147 . - . ID=gene-LDO45_RS06805;Name=LDO45_RS06805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06805;old_locus_tag=BDI4_1350013 NZ_CAJZAS010000041.1 Protein Homology CDS 10371 11147 . - 0 ID=cds-WP_059691197.1;Parent=gene-LDO45_RS06805;Dbxref=GenBank:WP_059691197.1;Name=WP_059691197.1;Ontology_term=GO:0006355,GO:0003700,GO:0030552;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,cAMP binding|0030552||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467894.1;locus_tag=LDO45_RS06805;product=Crp/Fnr family transcriptional regulator;protein_id=WP_059691197.1;transl_table=11 NZ_CAJZAS010000041.1 RefSeq gene 11571 12584 . - . ID=gene-LDO45_RS06810;Name=LDO45_RS06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06810;old_locus_tag=BDI4_1350014 NZ_CAJZAS010000041.1 Protein Homology CDS 11571 12584 . - 0 ID=cds-WP_223960738.1;Parent=gene-LDO45_RS06810;Dbxref=GenBank:WP_223960738.1;Name=WP_223960738.1;Ontology_term=GO:0006457,GO:0051082,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213623.1;locus_tag=LDO45_RS06810;product=lipase secretion chaperone;protein_id=WP_223960738.1;transl_table=11 NZ_CAJZAS010000041.1 RefSeq gene 12588 13739 . - . ID=gene-LDO45_RS06815;Name=LDO45_RS06815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06815;old_locus_tag=BDI4_1350015 NZ_CAJZAS010000041.1 Protein Homology CDS 12588 13739 . - 0 ID=cds-WP_223960740.1;Parent=gene-LDO45_RS06815;Dbxref=GenBank:WP_223960740.1;Name=WP_223960740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479374.1;locus_tag=LDO45_RS06815;product=triacylglycerol lipase;protein_id=WP_223960740.1;transl_table=11 NZ_CAJZAS010000041.1 RefSeq gene 13732 14148 . - . ID=gene-LDO45_RS06820;Name=LDO45_RS06820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06820;old_locus_tag=BDI4_1350016 NZ_CAJZAS010000041.1 Protein Homology CDS 13732 14148 . - 0 ID=cds-WP_223960742.1;Parent=gene-LDO45_RS06820;Dbxref=GenBank:WP_223960742.1;Name=WP_223960742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028324.1;locus_tag=LDO45_RS06820;product=DUF4345 domain-containing protein;protein_id=WP_223960742.1;transl_table=11 NZ_CAJZAS010000041.1 RefSeq gene 14165 15460 . - . ID=gene-LDO45_RS06825;Name=LDO45_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06825;old_locus_tag=BDI4_1350017 NZ_CAJZAS010000041.1 Protein Homology CDS 14165 15460 . - 0 ID=cds-WP_374109518.1;Parent=gene-LDO45_RS06825;Dbxref=GenBank:WP_374109518.1;Name=WP_374109518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190424.1;locus_tag=LDO45_RS06825;product=hypothetical protein;protein_id=WP_374109518.1;transl_table=11 NZ_CAJZAS010000041.1 RefSeq gene 15481 16260 . - . ID=gene-LDO45_RS06830;Name=LDO45_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06830;old_locus_tag=BDI4_1350018 NZ_CAJZAS010000041.1 Protein Homology CDS 15481 16260 . - 0 ID=cds-WP_223960746.1;Parent=gene-LDO45_RS06830;Dbxref=GenBank:WP_223960746.1;Name=WP_223960746.1;Ontology_term=GO:0042953,GO:0044874,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=lipoprotein transport|0042953||IEA,lipoprotein localization to outer membrane|0044874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213627.1;locus_tag=LDO45_RS06830;product=outer membrane lipoprotein-sorting protein;protein_id=WP_223960746.1;transl_table=11 NZ_CAJZAS010000041.1 RefSeq gene 16312 17182 . - . ID=gene-LDO45_RS06835;Name=LDO45_RS06835;end_range=17182,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06835;old_locus_tag=BDI4_1350019;partial=true NZ_CAJZAS010000041.1 Protein Homology CDS 16312 17182 . - 1 ID=cds-WP_223960748.1;Parent=gene-LDO45_RS06835;Dbxref=GenBank:WP_223960748.1;Name=WP_223960748.1;end_range=17182,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213628.1;locus_tag=LDO45_RS06835;partial=true;product=ABC transporter permease;protein_id=WP_223960748.1;transl_table=11 ##sequence-region NZ_CAJZAS010000042.1 1 2044 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000042.1 RefSeq region 1 2044 . + . ID=NZ_CAJZAS010000042.1:1..2044;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_136 NZ_CAJZAS010000042.1 RefSeq pseudogene 1 367 . + . ID=gene-LDO45_RS06840;Name=LDO45_RS06840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS06840;old_locus_tag=BDI4_1360001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000042.1 GeneMarkS-2+ CDS 1 367 . + 1 ID=cds-LDO45_RS06840;Parent=gene-LDO45_RS06840;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS06840;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000042.1 RefSeq gene 364 1089 . + . ID=gene-LDO45_RS06845;Name=LDO45_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06845;old_locus_tag=BDI4_1360002 NZ_CAJZAS010000042.1 Protein Homology CDS 364 1089 . + 0 ID=cds-WP_223960754.1;Parent=gene-LDO45_RS06845;Dbxref=GenBank:WP_223960754.1;Name=WP_223960754.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014273.5;locus_tag=LDO45_RS06845;product=ParB/Srx family N-terminal domain-containing protein;protein_id=WP_223960754.1;transl_table=11 NZ_CAJZAS010000042.1 RefSeq gene 1520 2044 . + . ID=gene-LDO45_RS06850;Name=LDO45_RS06850;end_range=2044,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06850;partial=true;start_range=.,1520 NZ_CAJZAS010000042.1 Protein Homology CDS 1520 2044 . + 1 ID=cds-WP_223960756.1;Parent=gene-LDO45_RS06850;Dbxref=GenBank:WP_223960756.1;Name=WP_223960756.1;end_range=2044,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019498.5;locus_tag=LDO45_RS06850;partial=true;product=cupin domain-containing protein;protein_id=WP_223960756.1;start_range=.,1520;transl_table=11 ##sequence-region NZ_CAJZAS010000043.1 1 637 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000043.1 RefSeq region 1 637 . + . ID=NZ_CAJZAS010000043.1:1..637;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_137 NZ_CAJZAS010000043.1 RefSeq gene 1 262 . - . ID=gene-LDO45_RS06855;Name=LDO45_RS06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06855;partial=true;start_range=.,1 NZ_CAJZAS010000043.1 GeneMarkS-2+ CDS 1 262 . - 0 ID=cds-WP_223960758.1;Parent=gene-LDO45_RS06855;Dbxref=GenBank:WP_223960758.1;Name=WP_223960758.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS06855;partial=true;product=hypothetical protein;protein_id=WP_223960758.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000043.1 RefSeq gene 263 637 . - . ID=gene-LDO45_RS06860;Name=LDO45_RS06860;end_range=637,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06860;old_locus_tag=BDI4_1370002;partial=true NZ_CAJZAS010000043.1 GeneMarkS-2+ CDS 263 637 . - 0 ID=cds-WP_223960760.1;Parent=gene-LDO45_RS06860;Dbxref=GenBank:WP_223960760.1;Name=WP_223960760.1;end_range=637,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS06860;partial=true;product=hypothetical protein;protein_id=WP_223960760.1;transl_table=11 ##sequence-region NZ_CAJZAS010000044.1 1 732 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000044.1 RefSeq region 1 732 . + . ID=NZ_CAJZAS010000044.1:1..732;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_138 NZ_CAJZAS010000044.1 RefSeq pseudogene 1 357 . - . ID=gene-LDO45_RS06865;Name=LDO45_RS06865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS06865;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000044.1 Protein Homology CDS 1 357 . - 0 ID=cds-LDO45_RS06865;Parent=gene-LDO45_RS06865;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024912.5;locus_tag=LDO45_RS06865;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000044.1 RefSeq gene 358 732 . - . ID=gene-LDO45_RS06870;Name=LDO45_RS06870;end_range=732,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06870;old_locus_tag=BDI4_1380002;partial=true NZ_CAJZAS010000044.1 GeneMarkS-2+ CDS 358 732 . - 0 ID=cds-WP_374109519.1;Parent=gene-LDO45_RS06870;Dbxref=GenBank:WP_374109519.1;Name=WP_374109519.1;end_range=732,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS06870;partial=true;product=hypothetical protein;protein_id=WP_374109519.1;transl_table=11 ##sequence-region NZ_CAJZAS010000045.1 1 18504 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000045.1 RefSeq region 1 18504 . + . ID=NZ_CAJZAS010000045.1:1..18504;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_139 NZ_CAJZAS010000045.1 RefSeq gene 1 864 . - . ID=gene-LDO45_RS06875;Name=LDO45_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06875;partial=true;start_range=.,1 NZ_CAJZAS010000045.1 Protein Homology CDS 1 864 . - 0 ID=cds-WP_223960762.1;Parent=gene-LDO45_RS06875;Dbxref=GenBank:WP_223960762.1;Name=WP_223960762.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334492.1;locus_tag=LDO45_RS06875;partial=true;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_223960762.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000045.1 RefSeq gene 902 2239 . - . ID=gene-LDO45_RS06880;Name=LDO45_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06880;old_locus_tag=BDI4_1390002 NZ_CAJZAS010000045.1 Protein Homology CDS 902 2239 . - 0 ID=cds-WP_059689197.1;Parent=gene-LDO45_RS06880;Dbxref=GenBank:WP_059689197.1;Name=WP_059689197.1;Ontology_term=GO:0006542,GO:0004356,GO:0005524;gbkey=CDS;go_function=glutamine synthetase activity|0004356||IEA,ATP binding|0005524||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657410.1;locus_tag=LDO45_RS06880;product=glutamine synthetase family protein;protein_id=WP_059689197.1;transl_table=11 NZ_CAJZAS010000045.1 RefSeq gene 2252 3058 . - . ID=gene-LDO45_RS06885;Name=LDO45_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06885;old_locus_tag=BDI4_1390003 NZ_CAJZAS010000045.1 Protein Homology CDS 2252 3058 . - 0 ID=cds-WP_223960764.1;Parent=gene-LDO45_RS06885;Dbxref=GenBank:WP_223960764.1;Name=WP_223960764.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497798.1;locus_tag=LDO45_RS06885;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_223960764.1;transl_table=11 NZ_CAJZAS010000045.1 RefSeq gene 3785 4582 . - . ID=gene-LDO45_RS06890;Name=hutG;gbkey=Gene;gene=hutG;gene_biotype=protein_coding;locus_tag=LDO45_RS06890;old_locus_tag=BDI4_1390004 NZ_CAJZAS010000045.1 Protein Homology CDS 3785 4582 . - 0 ID=cds-WP_223960766.1;Parent=gene-LDO45_RS06890;Dbxref=GenBank:WP_223960766.1;Name=WP_223960766.1;Ontology_term=GO:0019557,GO:0050129;gbkey=CDS;gene=hutG;go_function=N-formylglutamate deformylase activity|0050129||IEA;go_process=L-histidine catabolic process to glutamate and formate|0019557||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352604.1;locus_tag=LDO45_RS06890;product=N-formylglutamate deformylase;protein_id=WP_223960766.1;transl_table=11 NZ_CAJZAS010000045.1 RefSeq gene 4641 6017 . - . ID=gene-LDO45_RS06895;Name=LDO45_RS06895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06895;old_locus_tag=BDI4_1390005 NZ_CAJZAS010000045.1 Protein Homology CDS 4641 6017 . - 0 ID=cds-WP_059535684.1;Parent=gene-LDO45_RS06895;Dbxref=GenBank:WP_059535684.1;Name=WP_059535684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488097.1;locus_tag=LDO45_RS06895;product=formimidoylglutamate deiminase;protein_id=WP_059535684.1;transl_table=11 NZ_CAJZAS010000045.1 RefSeq gene 6041 7264 . - . ID=gene-LDO45_RS06900;Name=hutI;gbkey=Gene;gene=hutI;gene_biotype=protein_coding;locus_tag=LDO45_RS06900;old_locus_tag=BDI4_1390006 NZ_CAJZAS010000045.1 Protein Homology CDS 6041 7264 . - 0 ID=cds-WP_059689194.1;Parent=gene-LDO45_RS06900;Dbxref=GenBank:WP_059689194.1;Name=WP_059689194.1;Ontology_term=GO:0019556,GO:0016812,GO:0050480,GO:0005737;gbkey=CDS;gene=hutI;go_component=cytoplasm|0005737||IEA;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA,imidazolonepropionase activity|0050480||IEA;go_process=L-histidine catabolic process to glutamate and formamide|0019556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488078.1;locus_tag=LDO45_RS06900;product=imidazolonepropionase;protein_id=WP_059689194.1;transl_table=11 NZ_CAJZAS010000045.1 RefSeq gene 7269 7880 . - . ID=gene-LDO45_RS06905;Name=LDO45_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06905;old_locus_tag=BDI4_1390007 NZ_CAJZAS010000045.1 Protein Homology CDS 7269 7880 . - 0 ID=cds-WP_223960768.1;Parent=gene-LDO45_RS06905;Dbxref=GenBank:WP_223960768.1;Name=WP_223960768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328849.1;locus_tag=LDO45_RS06905;product=HutD family protein;protein_id=WP_223960768.1;transl_table=11 NZ_CAJZAS010000045.1 RefSeq gene 7883 9571 . - . ID=gene-LDO45_RS06910;Name=hutU;gbkey=Gene;gene=hutU;gene_biotype=protein_coding;locus_tag=LDO45_RS06910;old_locus_tag=BDI4_1390008 NZ_CAJZAS010000045.1 Protein Homology CDS 7883 9571 . - 0 ID=cds-WP_175908693.1;Parent=gene-LDO45_RS06910;Dbxref=GenBank:WP_175908693.1;Name=WP_175908693.1;Ontology_term=GO:0006548,GO:0016153;gbkey=CDS;gene=hutU;go_function=urocanate hydratase activity|0016153||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600548.1;locus_tag=LDO45_RS06910;product=urocanate hydratase;protein_id=WP_175908693.1;transl_table=11 NZ_CAJZAS010000045.1 RefSeq gene 9612 10307 . - . ID=gene-LDO45_RS06915;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=LDO45_RS06915;old_locus_tag=BDI4_1390009 NZ_CAJZAS010000045.1 Protein Homology CDS 9612 10307 . - 0 ID=cds-WP_044847652.1;Parent=gene-LDO45_RS06915;Dbxref=GenBank:WP_044847652.1;Name=WP_044847652.1;Ontology_term=GO:0006355,GO:0006547,GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-histidine metabolic process|0006547||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010116292.1;locus_tag=LDO45_RS06915;product=histidine utilization repressor;protein_id=WP_044847652.1;transl_table=11 NZ_CAJZAS010000045.1 RefSeq gene 10312 11835 . - . ID=gene-LDO45_RS06920;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=LDO45_RS06920;old_locus_tag=BDI4_1390010 NZ_CAJZAS010000045.1 Protein Homology CDS 10312 11835 . - 0 ID=cds-WP_059701623.1;Parent=gene-LDO45_RS06920;Dbxref=GenBank:WP_059701623.1;Name=WP_059701623.1;Ontology_term=GO:0006548,GO:0004397,GO:0005737;gbkey=CDS;gene=hutH;go_component=cytoplasm|0005737||IEA;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657420.1;locus_tag=LDO45_RS06920;product=histidine ammonia-lyase;protein_id=WP_059701623.1;transl_table=11 NZ_CAJZAS010000045.1 RefSeq gene 12062 12982 . + . ID=gene-LDO45_RS06925;Name=LDO45_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06925;old_locus_tag=BDI4_1390013 NZ_CAJZAS010000045.1 Protein Homology CDS 12062 12982 . + 0 ID=cds-WP_059535692.1;Parent=gene-LDO45_RS06925;Dbxref=GenBank:WP_059535692.1;Name=WP_059535692.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402006.1;locus_tag=LDO45_RS06925;product=glutamate/aspartate ABC transporter substrate-binding protein;protein_id=WP_059535692.1;transl_table=11 NZ_CAJZAS010000045.1 RefSeq gene 13004 13756 . - . ID=gene-LDO45_RS06930;Name=LDO45_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06930;old_locus_tag=BDI4_1390014 NZ_CAJZAS010000045.1 Protein Homology CDS 13004 13756 . - 0 ID=cds-WP_223960770.1;Parent=gene-LDO45_RS06930;Dbxref=GenBank:WP_223960770.1;Name=WP_223960770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896577.1;locus_tag=LDO45_RS06930;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=WP_223960770.1;transl_table=11 NZ_CAJZAS010000045.1 RefSeq gene 13874 14917 . - . ID=gene-LDO45_RS06935;Name=LDO45_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06935;old_locus_tag=BDI4_1390015 NZ_CAJZAS010000045.1 Protein Homology CDS 13874 14917 . - 0 ID=cds-WP_223960772.1;Parent=gene-LDO45_RS06935;Dbxref=GenBank:WP_223960772.1;Name=WP_223960772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497791.1;locus_tag=LDO45_RS06935;product=alpha/beta fold hydrolase;protein_id=WP_223960772.1;transl_table=11 NZ_CAJZAS010000045.1 RefSeq gene 15037 15978 . + . ID=gene-LDO45_RS06940;Name=LDO45_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06940;old_locus_tag=BDI4_1390016 NZ_CAJZAS010000045.1 Protein Homology CDS 15037 15978 . + 0 ID=cds-WP_223960774.1;Parent=gene-LDO45_RS06940;Dbxref=GenBank:WP_223960774.1;Name=WP_223960774.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364265.1;locus_tag=LDO45_RS06940;product=LysR substrate-binding domain-containing protein;protein_id=WP_223960774.1;transl_table=11 NZ_CAJZAS010000045.1 RefSeq gene 16287 17519 . + . ID=gene-LDO45_RS06945;Name=LDO45_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06945;old_locus_tag=BDI4_1390018 NZ_CAJZAS010000045.1 Protein Homology CDS 16287 17519 . + 0 ID=cds-WP_223960776.1;Parent=gene-LDO45_RS06945;Dbxref=GenBank:WP_223960776.1;Name=WP_223960776.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896574.1;locus_tag=LDO45_RS06945;product=MFS transporter;protein_id=WP_223960776.1;transl_table=11 NZ_CAJZAS010000045.1 RefSeq gene 17510 17632 . + . ID=gene-LDO45_RS34215;Name=LDO45_RS34215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34215;old_locus_tag=BDI4_1390017 NZ_CAJZAS010000045.1 GeneMarkS-2+ CDS 17510 17632 . + 0 ID=cds-WP_290371000.1;Parent=gene-LDO45_RS34215;Dbxref=GenBank:WP_290371000.1;Name=WP_290371000.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34215;product=hypothetical protein;protein_id=WP_290371000.1;transl_table=11 NZ_CAJZAS010000045.1 RefSeq gene 17684 18504 . - . ID=gene-LDO45_RS06950;Name=LDO45_RS06950;end_range=18504,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06950;old_locus_tag=BDI4_1390019;partial=true NZ_CAJZAS010000045.1 Protein Homology CDS 17684 18504 . - 2 ID=cds-WP_223960778.1;Parent=gene-LDO45_RS06950;Dbxref=GenBank:WP_223960778.1;Name=WP_223960778.1;Ontology_term=GO:0006281,GO:0003677,GO:0003904,GO:0050660;end_range=18504,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,deoxyribodipyrimidine photo-lyase activity|0003904||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549418.1;locus_tag=LDO45_RS06950;partial=true;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_223960778.1;transl_table=11 ##sequence-region NZ_CAJZAS010000046.1 1 13942 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000046.1 RefSeq region 1 13942 . + . ID=NZ_CAJZAS010000046.1:1..13942;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_14 NZ_CAJZAS010000046.1 RefSeq gene 78 722 . + . ID=gene-LDO45_RS06955;Name=LDO45_RS06955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06955;old_locus_tag=BDI4_140001 NZ_CAJZAS010000046.1 Protein Homology CDS 78 722 . + 0 ID=cds-WP_059691419.1;Parent=gene-LDO45_RS06955;Dbxref=GenBank:WP_059691419.1;Name=WP_059691419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908400.1;locus_tag=LDO45_RS06955;product=alpha/beta hydrolase;protein_id=WP_059691419.1;transl_table=11 NZ_CAJZAS010000046.1 RefSeq gene 1208 2524 . + . ID=gene-LDO45_RS06960;Name=LDO45_RS06960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06960;old_locus_tag=BDI4_140002 NZ_CAJZAS010000046.1 Protein Homology CDS 1208 2524 . + 0 ID=cds-WP_059703286.1;Parent=gene-LDO45_RS06960;Dbxref=GenBank:WP_059703286.1;Name=WP_059703286.1;Ontology_term=GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534083.1;locus_tag=LDO45_RS06960;product=D-alanyl-D-alanine carboxypeptidase family protein;protein_id=WP_059703286.1;transl_table=11 NZ_CAJZAS010000046.1 RefSeq gene 2573 3499 . + . ID=gene-LDO45_RS06965;Name=LDO45_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06965;old_locus_tag=BDI4_140003 NZ_CAJZAS010000046.1 Protein Homology CDS 2573 3499 . + 0 ID=cds-WP_059524008.1;Parent=gene-LDO45_RS06965;Dbxref=GenBank:WP_059524008.1;Name=WP_059524008.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886142.1;locus_tag=LDO45_RS06965;product=D-amino acid aminotransferase;protein_id=WP_059524008.1;transl_table=11 NZ_CAJZAS010000046.1 RefSeq gene 3499 3807 . + . ID=gene-LDO45_RS06970;Name=LDO45_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06970;old_locus_tag=BDI4_140004 NZ_CAJZAS010000046.1 Protein Homology CDS 3499 3807 . + 0 ID=cds-WP_223960780.1;Parent=gene-LDO45_RS06970;Dbxref=GenBank:WP_223960780.1;Name=WP_223960780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601869.1;locus_tag=LDO45_RS06970;product=YbeD family protein;protein_id=WP_223960780.1;transl_table=11 NZ_CAJZAS010000046.1 RefSeq gene 4093 5064 . - . ID=gene-LDO45_RS06975;Name=LDO45_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06975;old_locus_tag=BDI4_140005 NZ_CAJZAS010000046.1 Protein Homology CDS 4093 5064 . - 0 ID=cds-WP_223960782.1;Parent=gene-LDO45_RS06975;Dbxref=GenBank:WP_223960782.1;Name=WP_223960782.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895918.1;locus_tag=LDO45_RS06975;product=transcriptional regulator GcvA;protein_id=WP_223960782.1;transl_table=11 NZ_CAJZAS010000046.1 RefSeq gene 5167 5493 . + . ID=gene-LDO45_RS06980;Name=LDO45_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS06980;old_locus_tag=BDI4_140007 NZ_CAJZAS010000046.1 Protein Homology CDS 5167 5493 . + 0 ID=cds-WP_059524043.1;Parent=gene-LDO45_RS06980;Dbxref=GenBank:WP_059524043.1;Name=WP_059524043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546304.1;locus_tag=LDO45_RS06980;product=DUF2917 domain-containing protein;protein_id=WP_059524043.1;transl_table=11 NZ_CAJZAS010000046.1 RefSeq gene 5577 6332 . + . ID=gene-LDO45_RS06985;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=LDO45_RS06985;old_locus_tag=BDI4_140006 NZ_CAJZAS010000046.1 Protein Homology CDS 5577 6332 . + 0 ID=cds-WP_223960784.1;Parent=gene-LDO45_RS06985;Dbxref=GenBank:WP_223960784.1;Name=WP_223960784.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364793.1;locus_tag=LDO45_RS06985;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_223960784.1;transl_table=11 NZ_CAJZAS010000046.1 RefSeq gene 6325 7317 . + . ID=gene-LDO45_RS06990;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=LDO45_RS06990;old_locus_tag=BDI4_140008 NZ_CAJZAS010000046.1 Protein Homology CDS 6325 7317 . + 0 ID=cds-WP_057928546.1;Parent=gene-LDO45_RS06990;Dbxref=GenBank:WP_057928546.1;Name=WP_057928546.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601526.1;locus_tag=LDO45_RS06990;product=lipoyl synthase;protein_id=WP_057928546.1;transl_table=11 NZ_CAJZAS010000046.1 RefSeq gene 7575 8591 . + . ID=gene-LDO45_RS06995;Name=tauA;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=LDO45_RS06995;old_locus_tag=BDI4_140009 NZ_CAJZAS010000046.1 Protein Homology CDS 7575 8591 . + 0 ID=cds-WP_223960786.1;Parent=gene-LDO45_RS06995;Dbxref=GenBank:WP_223960786.1;Name=WP_223960786.1;Ontology_term=GO:0015734,GO:0015411,GO:0030977,GO:0042597,GO:0055052;gbkey=CDS;gene=tauA;go_component=periplasmic space|0042597||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type taurine transporter transporter activity|0015411||IEA,taurine binding|0030977||IEA;go_process=taurine transmembrane transport|0015734||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763294.1;locus_tag=LDO45_RS06995;product=taurine ABC transporter substrate-binding protein;protein_id=WP_223960786.1;transl_table=11 NZ_CAJZAS010000046.1 RefSeq gene 8640 9437 . + . ID=gene-LDO45_RS07000;Name=LDO45_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07000;old_locus_tag=BDI4_140010 NZ_CAJZAS010000046.1 Protein Homology CDS 8640 9437 . + 0 ID=cds-WP_059691423.1;Parent=gene-LDO45_RS07000;Dbxref=GenBank:WP_059691423.1;Name=WP_059691423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412682.1;locus_tag=LDO45_RS07000;product=taurine ABC transporter ATP-binding protein;protein_id=WP_059691423.1;transl_table=11 NZ_CAJZAS010000046.1 RefSeq gene 9437 10390 . + . ID=gene-LDO45_RS07005;Name=LDO45_RS07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07005;old_locus_tag=BDI4_140011 NZ_CAJZAS010000046.1 Protein Homology CDS 9437 10390 . + 0 ID=cds-WP_223960792.1;Parent=gene-LDO45_RS07005;Dbxref=GenBank:WP_223960792.1;Name=WP_223960792.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895924.1;locus_tag=LDO45_RS07005;product=ABC transporter permease subunit;protein_id=WP_223960792.1;transl_table=11 NZ_CAJZAS010000046.1 RefSeq gene 10434 12317 . - . ID=gene-LDO45_RS07010;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=LDO45_RS07010;old_locus_tag=BDI4_140012 NZ_CAJZAS010000046.1 Protein Homology CDS 10434 12317 . - 0 ID=cds-WP_223960788.1;Parent=gene-LDO45_RS07010;Dbxref=GenBank:WP_223960788.1;Name=WP_223960788.1;Ontology_term=GO:0006750,GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione biosynthetic process|0006750||IEA,glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477697.1;locus_tag=LDO45_RS07010;product=gamma-glutamyltransferase;protein_id=WP_223960788.1;transl_table=11 NZ_CAJZAS010000046.1 RefSeq gene 12388 13350 . - . ID=gene-LDO45_RS07015;Name=LDO45_RS07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07015;old_locus_tag=BDI4_140013 NZ_CAJZAS010000046.1 Protein Homology CDS 12388 13350 . - 0 ID=cds-WP_059691426.1;Parent=gene-LDO45_RS07015;Dbxref=GenBank:WP_059691426.1;Name=WP_059691426.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353323.1;locus_tag=LDO45_RS07015;product=LysR family transcriptional regulator;protein_id=WP_059691426.1;transl_table=11 NZ_CAJZAS010000046.1 RefSeq gene 13601 13942 . + . ID=gene-LDO45_RS07020;Name=LDO45_RS07020;end_range=13942,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07020;partial=true NZ_CAJZAS010000046.1 Protein Homology CDS 13601 13942 . + 0 ID=cds-WP_223960790.1;Parent=gene-LDO45_RS07020;Dbxref=GenBank:WP_223960790.1;Name=WP_223960790.1;Ontology_term=GO:0003824;end_range=13942,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411006.1;locus_tag=LDO45_RS07020;partial=true;product=enoyl-CoA hydratase-related protein;protein_id=WP_223960790.1;transl_table=11 ##sequence-region NZ_CAJZAS010000047.1 1 660 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000047.1 RefSeq region 1 660 . + . ID=NZ_CAJZAS010000047.1:1..660;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_140 NZ_CAJZAS010000047.1 RefSeq pseudogene 558 660 . + . ID=gene-LDO45_RS34380;Name=LDO45_RS34380;end_range=660,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34380;partial=true;pseudo=true NZ_CAJZAS010000047.1 Protein Homology CDS 558 660 . + 0 ID=cds-LDO45_RS34380;Parent=gene-LDO45_RS34380;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=660,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548046.1;locus_tag=LDO45_RS34380;partial=true;product=sulfonate ABC transporter substrate-binding protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000048.1 1 24244 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000048.1 RefSeq region 1 24244 . + . ID=NZ_CAJZAS010000048.1:1..24244;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_141 NZ_CAJZAS010000048.1 RefSeq gene 1 1764 . + . ID=gene-LDO45_RS07025;Name=LDO45_RS07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07025;old_locus_tag=BDI4_1410001;partial=true;start_range=.,1 NZ_CAJZAS010000048.1 Protein Homology CDS 1 1764 . + 0 ID=cds-WP_223960794.1;Parent=gene-LDO45_RS07025;Dbxref=GenBank:WP_223960794.1;Name=WP_223960794.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350950.1;locus_tag=LDO45_RS07025;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_223960794.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000048.1 RefSeq gene 1891 2616 . - . ID=gene-LDO45_RS07030;Name=LDO45_RS07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07030;old_locus_tag=BDI4_1410002 NZ_CAJZAS010000048.1 Protein Homology CDS 1891 2616 . - 0 ID=cds-WP_059465398.1;Parent=gene-LDO45_RS07030;Dbxref=GenBank:WP_059465398.1;Name=WP_059465398.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=LDO45_RS07030;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_059465398.1;transl_table=11 NZ_CAJZAS010000048.1 RefSeq gene 2613 3290 . - . ID=gene-LDO45_RS07035;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=LDO45_RS07035;old_locus_tag=BDI4_1410003 NZ_CAJZAS010000048.1 Protein Homology CDS 2613 3290 . - 0 ID=cds-WP_059535318.1;Parent=gene-LDO45_RS07035;Dbxref=GenBank:WP_059535318.1;Name=WP_059535318.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025271.1;locus_tag=LDO45_RS07035;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_059535318.1;transl_table=11 NZ_CAJZAS010000048.1 RefSeq gene 3290 4030 . - . ID=gene-LDO45_RS07040;Name=LDO45_RS07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07040;old_locus_tag=BDI4_1410004 NZ_CAJZAS010000048.1 Protein Homology CDS 3290 4030 . - 0 ID=cds-WP_059535316.1;Parent=gene-LDO45_RS07040;Dbxref=GenBank:WP_059535316.1;Name=WP_059535316.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601464.1;locus_tag=LDO45_RS07040;product=amino acid ABC transporter permease;protein_id=WP_059535316.1;transl_table=11 NZ_CAJZAS010000048.1 RefSeq gene 4115 5008 . - . ID=gene-LDO45_RS07045;Name=LDO45_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07045;old_locus_tag=BDI4_1410005 NZ_CAJZAS010000048.1 Protein Homology CDS 4115 5008 . - 0 ID=cds-WP_059689134.1;Parent=gene-LDO45_RS07045;Dbxref=GenBank:WP_059689134.1;Name=WP_059689134.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889082.1;locus_tag=LDO45_RS07045;product=glutamate/aspartate ABC transporter substrate-binding protein;protein_id=WP_059689134.1;transl_table=11 NZ_CAJZAS010000048.1 RefSeq gene 5259 6545 . - . ID=gene-LDO45_RS07050;Name=LDO45_RS07050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07050;old_locus_tag=BDI4_1410006 NZ_CAJZAS010000048.1 Protein Homology CDS 5259 6545 . - 0 ID=cds-WP_059465395.1;Parent=gene-LDO45_RS07050;Dbxref=GenBank:WP_059465395.1;Name=WP_059465395.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898081.1;locus_tag=LDO45_RS07050;product=Glu/Leu/Phe/Val dehydrogenase;protein_id=WP_059465395.1;transl_table=11 NZ_CAJZAS010000048.1 RefSeq gene 6823 7776 . - . ID=gene-LDO45_RS07055;Name=LDO45_RS07055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07055;old_locus_tag=BDI4_1410007 NZ_CAJZAS010000048.1 Protein Homology CDS 6823 7776 . - 0 ID=cds-WP_059535314.1;Parent=gene-LDO45_RS07055;Dbxref=GenBank:WP_059535314.1;Name=WP_059535314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413390.1;locus_tag=LDO45_RS07055;product=LysR substrate-binding domain-containing protein;protein_id=WP_059535314.1;transl_table=11 NZ_CAJZAS010000048.1 RefSeq gene 8043 9431 . + . ID=gene-LDO45_RS07060;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=LDO45_RS07060;old_locus_tag=BDI4_1410009 NZ_CAJZAS010000048.1 Protein Homology CDS 8043 9431 . + 0 ID=cds-WP_223960796.1;Parent=gene-LDO45_RS07060;Dbxref=GenBank:WP_223960796.1;Name=WP_223960796.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908754.1;locus_tag=LDO45_RS07060;product=adenylosuccinate lyase;protein_id=WP_223960796.1;transl_table=11 NZ_CAJZAS010000048.1 RefSeq gene 9532 10953 . - . ID=gene-LDO45_RS07065;Name=LDO45_RS07065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07065;old_locus_tag=BDI4_1410010 NZ_CAJZAS010000048.1 Protein Homology CDS 9532 10953 . - 0 ID=cds-WP_223960797.1;Parent=gene-LDO45_RS07065;Dbxref=GenBank:WP_223960797.1;Name=WP_223960797.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496716.1;locus_tag=LDO45_RS07065;product=FAD-binding oxidoreductase;protein_id=WP_223960797.1;transl_table=11 NZ_CAJZAS010000048.1 RefSeq gene 11219 11866 . + . ID=gene-LDO45_RS07070;Name=LDO45_RS07070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07070;old_locus_tag=BDI4_1410011 NZ_CAJZAS010000048.1 Protein Homology CDS 11219 11866 . + 0 ID=cds-WP_223960799.1;Parent=gene-LDO45_RS07070;Dbxref=GenBank:WP_223960799.1;Name=WP_223960799.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350941.1;locus_tag=LDO45_RS07070;product=TetR/AcrR family transcriptional regulator;protein_id=WP_223960799.1;transl_table=11 NZ_CAJZAS010000048.1 RefSeq gene 11950 12453 . - . ID=gene-LDO45_RS07075;Name=LDO45_RS07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07075;old_locus_tag=BDI4_1410012 NZ_CAJZAS010000048.1 Protein Homology CDS 11950 12453 . - 0 ID=cds-WP_223960801.1;Parent=gene-LDO45_RS07075;Dbxref=GenBank:WP_223960801.1;Name=WP_223960801.1;Ontology_term=GO:0046177,GO:0005524,GO:0046316;gbkey=CDS;go_function=ATP binding|0005524||IEA,gluconokinase activity|0046316||IEA;go_process=D-gluconate catabolic process|0046177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753807.1;locus_tag=LDO45_RS07075;product=gluconokinase;protein_id=WP_223960801.1;transl_table=11 NZ_CAJZAS010000048.1 RefSeq gene 12467 13828 . - . ID=gene-LDO45_RS07080;Name=LDO45_RS07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07080;old_locus_tag=BDI4_1410013 NZ_CAJZAS010000048.1 Protein Homology CDS 12467 13828 . - 0 ID=cds-WP_059535304.1;Parent=gene-LDO45_RS07080;Dbxref=GenBank:WP_059535304.1;Name=WP_059535304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600646.1;locus_tag=LDO45_RS07080;product=GntP family permease;protein_id=WP_059535304.1;transl_table=11 NZ_CAJZAS010000048.1 RefSeq gene 14050 14676 . - . ID=gene-LDO45_RS07085;Name=eda;gbkey=Gene;gene=eda;gene_biotype=protein_coding;locus_tag=LDO45_RS07085;old_locus_tag=BDI4_1410014 NZ_CAJZAS010000048.1 Protein Homology CDS 14050 14676 . - 0 ID=cds-WP_059465387.1;Parent=gene-LDO45_RS07085;Dbxref=GenBank:WP_059465387.1;Name=WP_059465387.1;Ontology_term=GO:0009255,GO:0008675,GO:0008700;gbkey=CDS;gene=eda;go_function=2-dehydro-3-deoxy-phosphogluconate aldolase activity|0008675||IEA,4-hydroxy-2-oxoglutarate aldolase activity|0008700||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760216.1;locus_tag=LDO45_RS07085;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_059465387.1;transl_table=11 NZ_CAJZAS010000048.1 RefSeq gene 14696 16552 . - . ID=gene-LDO45_RS07090;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=LDO45_RS07090;old_locus_tag=BDI4_1410015 NZ_CAJZAS010000048.1 Protein Homology CDS 14696 16552 . - 0 ID=cds-WP_059700704.1;Parent=gene-LDO45_RS07090;Dbxref=GenBank:WP_059700704.1;Name=WP_059700704.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407565.1;locus_tag=LDO45_RS07090;product=phosphogluconate dehydratase;protein_id=WP_059700704.1;transl_table=11 NZ_CAJZAS010000048.1 RefSeq gene 16846 17694 . + . ID=gene-LDO45_RS07095;Name=LDO45_RS07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07095;old_locus_tag=BDI4_1410017 NZ_CAJZAS010000048.1 Protein Homology CDS 16846 17694 . + 0 ID=cds-WP_223960803.1;Parent=gene-LDO45_RS07095;Dbxref=GenBank:WP_223960803.1;Name=WP_223960803.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476919.1;locus_tag=LDO45_RS07095;product=MurR/RpiR family transcriptional regulator;protein_id=WP_223960803.1;transl_table=11 NZ_CAJZAS010000048.1 RefSeq gene 17779 18201 . - . ID=gene-LDO45_RS07100;Name=LDO45_RS07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07100;old_locus_tag=BDI4_1410018 NZ_CAJZAS010000048.1 Protein Homology CDS 17779 18201 . - 0 ID=cds-WP_223960805.1;Parent=gene-LDO45_RS07100;Dbxref=GenBank:WP_223960805.1;Name=WP_223960805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483416.1;locus_tag=LDO45_RS07100;product=CopD family protein;protein_id=WP_223960805.1;transl_table=11 NZ_CAJZAS010000048.1 RefSeq gene 18219 19490 . - . ID=gene-LDO45_RS07105;Name=LDO45_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07105;old_locus_tag=BDI4_1410019 NZ_CAJZAS010000048.1 Protein Homology CDS 18219 19490 . - 0 ID=cds-WP_223960807.1;Parent=gene-LDO45_RS07105;Dbxref=GenBank:WP_223960807.1;Name=WP_223960807.1;Ontology_term=GO:0006561,GO:0004350,GO:0016620;gbkey=CDS;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413382.1;locus_tag=LDO45_RS07105;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_223960807.1;transl_table=11 NZ_CAJZAS010000048.1 RefSeq gene 19628 20722 . - . ID=gene-LDO45_RS07110;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=LDO45_RS07110;old_locus_tag=BDI4_1410020 NZ_CAJZAS010000048.1 Protein Homology CDS 19628 20722 . - 0 ID=cds-WP_223960809.1;Parent=gene-LDO45_RS07110;Dbxref=GenBank:WP_223960809.1;Name=WP_223960809.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400342.1;locus_tag=LDO45_RS07110;product=DNA polymerase III subunit delta;protein_id=WP_223960809.1;transl_table=11 NZ_CAJZAS010000048.1 RefSeq gene 20741 21295 . - . ID=gene-LDO45_RS07115;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=LDO45_RS07115;old_locus_tag=BDI4_1410021 NZ_CAJZAS010000048.1 Protein Homology CDS 20741 21295 . - 0 ID=cds-WP_059689078.1;Parent=gene-LDO45_RS07115;Dbxref=GenBank:WP_059689078.1;Name=WP_059689078.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765183.1;locus_tag=LDO45_RS07115;product=LPS assembly lipoprotein LptE;protein_id=WP_059689078.1;transl_table=11 NZ_CAJZAS010000048.1 RefSeq gene 21334 23928 . - . ID=gene-LDO45_RS07120;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=LDO45_RS07120;old_locus_tag=BDI4_1410022 NZ_CAJZAS010000048.1 Protein Homology CDS 21334 23928 . - 0 ID=cds-WP_059535290.1;Parent=gene-LDO45_RS07120;Dbxref=GenBank:WP_059535290.1;Name=WP_059535290.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363082.1;locus_tag=LDO45_RS07120;product=leucine--tRNA ligase;protein_id=WP_059535290.1;transl_table=11 ##sequence-region NZ_CAJZAS010000049.1 1 14862 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000049.1 RefSeq region 1 14862 . + . ID=NZ_CAJZAS010000049.1:1..14862;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_142 NZ_CAJZAS010000049.1 RefSeq gene 1 238 . - . ID=gene-LDO45_RS07125;Name=LDO45_RS07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07125;partial=true;start_range=.,1 NZ_CAJZAS010000049.1 GeneMarkS-2+ CDS 1 238 . - 0 ID=cds-WP_223960811.1;Parent=gene-LDO45_RS07125;Dbxref=GenBank:WP_223960811.1;Name=WP_223960811.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS07125;partial=true;product=hypothetical protein;protein_id=WP_223960811.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000049.1 RefSeq gene 293 1360 . + . ID=gene-LDO45_RS07130;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=LDO45_RS07130;old_locus_tag=BDI4_1420001 NZ_CAJZAS010000049.1 Protein Homology CDS 293 1360 . + 0 ID=cds-WP_059535378.1;Parent=gene-LDO45_RS07130;Dbxref=GenBank:WP_059535378.1;Name=WP_059535378.1;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476866.1;locus_tag=LDO45_RS07130;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_059535378.1;transl_table=11 NZ_CAJZAS010000049.1 RefSeq gene 1579 2766 . + . ID=gene-LDO45_RS07135;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=LDO45_RS07135;old_locus_tag=BDI4_1420002 NZ_CAJZAS010000049.1 Protein Homology CDS 1579 2766 . + 0 ID=cds-WP_059535520.1;Parent=gene-LDO45_RS07135;Dbxref=GenBank:WP_059535520.1;Name=WP_059535520.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363129.1;locus_tag=LDO45_RS07135;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_059535520.1;transl_table=11 NZ_CAJZAS010000049.1 RefSeq gene 3034 3357 . + . ID=gene-LDO45_RS07140;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=LDO45_RS07140;old_locus_tag=BDI4_1420004 NZ_CAJZAS010000049.1 Protein Homology CDS 3034 3357 . + 0 ID=cds-WP_006476868.1;Parent=gene-LDO45_RS07140;Dbxref=GenBank:WP_006476868.1;Name=WP_006476868.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014190436.1;locus_tag=LDO45_RS07140;product=preprotein translocase subunit YajC;protein_id=WP_006476868.1;transl_table=11 NZ_CAJZAS010000049.1 RefSeq gene 3464 5485 . + . ID=gene-LDO45_RS07145;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=LDO45_RS07145;old_locus_tag=BDI4_1420005 NZ_CAJZAS010000049.1 Protein Homology CDS 3464 5485 . + 0 ID=cds-WP_059535377.1;Parent=gene-LDO45_RS07145;Dbxref=GenBank:WP_059535377.1;Name=WP_059535377.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363128.1;locus_tag=LDO45_RS07145;product=protein translocase subunit SecD;protein_id=WP_059535377.1;transl_table=11 NZ_CAJZAS010000049.1 RefSeq gene 5504 6454 . + . ID=gene-LDO45_RS07150;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=LDO45_RS07150;old_locus_tag=BDI4_1420006 NZ_CAJZAS010000049.1 Protein Homology CDS 5504 6454 . + 0 ID=cds-WP_059465429.1;Parent=gene-LDO45_RS07150;Dbxref=GenBank:WP_059465429.1;Name=WP_059465429.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011852175.1;locus_tag=LDO45_RS07150;product=protein translocase subunit SecF;protein_id=WP_059465429.1;transl_table=11 NZ_CAJZAS010000049.1 RefSeq gene 6613 8154 . + . ID=gene-LDO45_RS07155;Name=LDO45_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07155;old_locus_tag=BDI4_1420007 NZ_CAJZAS010000049.1 Protein Homology CDS 6613 8154 . + 0 ID=cds-WP_223960813.1;Parent=gene-LDO45_RS07155;Dbxref=GenBank:WP_223960813.1;Name=WP_223960813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350994.1;locus_tag=LDO45_RS07155;product=S41 family peptidase;protein_id=WP_223960813.1;transl_table=11 NZ_CAJZAS010000049.1 RefSeq gene 8176 9453 . - . ID=gene-LDO45_RS07160;Name=LDO45_RS07160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07160;old_locus_tag=BDI4_1420008 NZ_CAJZAS010000049.1 Protein Homology CDS 8176 9453 . - 0 ID=cds-WP_175915721.1;Parent=gene-LDO45_RS07160;Dbxref=GenBank:WP_175915721.1;Name=WP_175915721.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760287.1;locus_tag=LDO45_RS07160;product=MFS transporter;protein_id=WP_175915721.1;transl_table=11 NZ_CAJZAS010000049.1 RefSeq gene 9629 10210 . - . ID=gene-LDO45_RS07165;Name=LDO45_RS07165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07165;old_locus_tag=BDI4_1420009 NZ_CAJZAS010000049.1 Protein Homology CDS 9629 10210 . - 0 ID=cds-WP_059535372.1;Parent=gene-LDO45_RS07165;Dbxref=GenBank:WP_059535372.1;Name=WP_059535372.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760288.1;locus_tag=LDO45_RS07165;product=YceI family protein;protein_id=WP_059535372.1;transl_table=11 NZ_CAJZAS010000049.1 RefSeq gene 10277 10837 . - . ID=gene-LDO45_RS07170;Name=LDO45_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07170;old_locus_tag=BDI4_1420010 NZ_CAJZAS010000049.1 Protein Homology CDS 10277 10837 . - 0 ID=cds-WP_059535517.1;Parent=gene-LDO45_RS07170;Dbxref=GenBank:WP_059535517.1;Name=WP_059535517.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106308.1;locus_tag=LDO45_RS07170;product=YceI family protein;protein_id=WP_059535517.1;transl_table=11 NZ_CAJZAS010000049.1 RefSeq gene 10846 11406 . - . ID=gene-LDO45_RS07175;Name=LDO45_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07175;old_locus_tag=BDI4_1420011 NZ_CAJZAS010000049.1 Protein Homology CDS 10846 11406 . - 0 ID=cds-WP_223960815.1;Parent=gene-LDO45_RS07175;Dbxref=GenBank:WP_223960815.1;Name=WP_223960815.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602248.1;locus_tag=LDO45_RS07175;product=cytochrome b;protein_id=WP_223960815.1;transl_table=11 NZ_CAJZAS010000049.1 RefSeq gene 11666 12331 . + . ID=gene-LDO45_RS07180;Name=LDO45_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07180;old_locus_tag=BDI4_1420012 NZ_CAJZAS010000049.1 Protein Homology CDS 11666 12331 . + 0 ID=cds-WP_223960817.1;Parent=gene-LDO45_RS07180;Dbxref=GenBank:WP_223960817.1;Name=WP_223960817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327922.1;locus_tag=LDO45_RS07180;product=paraquat-inducible protein A;protein_id=WP_223960817.1;transl_table=11 NZ_CAJZAS010000049.1 RefSeq gene 12328 12957 . + . ID=gene-LDO45_RS07185;Name=LDO45_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07185;old_locus_tag=BDI4_1420013 NZ_CAJZAS010000049.1 Protein Homology CDS 12328 12957 . + 0 ID=cds-WP_059535367.1;Parent=gene-LDO45_RS07185;Dbxref=GenBank:WP_059535367.1;Name=WP_059535367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883309.1;locus_tag=LDO45_RS07185;product=paraquat-inducible protein A;protein_id=WP_059535367.1;transl_table=11 NZ_CAJZAS010000049.1 RefSeq gene 12950 14566 . + . ID=gene-LDO45_RS07190;Name=LDO45_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07190;old_locus_tag=BDI4_1420014 NZ_CAJZAS010000049.1 Protein Homology CDS 12950 14566 . + 0 ID=cds-WP_059535365.1;Parent=gene-LDO45_RS07190;Dbxref=GenBank:WP_059535365.1;Name=WP_059535365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009974101.1;locus_tag=LDO45_RS07190;product=intermembrane transport protein PqiB;protein_id=WP_059535365.1;transl_table=11 NZ_CAJZAS010000049.1 RefSeq gene 14566 14862 . + . ID=gene-LDO45_RS07195;Name=LDO45_RS07195;end_range=14862,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07195;partial=true NZ_CAJZAS010000049.1 Protein Homology CDS 14566 14862 . + 0 ID=cds-WP_223960818.1;Parent=gene-LDO45_RS07195;Dbxref=GenBank:WP_223960818.1;Name=WP_223960818.1;end_range=14862,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401658.1;locus_tag=LDO45_RS07195;partial=true;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_223960818.1;transl_table=11 ##sequence-region NZ_CAJZAS010000050.1 1 4514 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000050.1 RefSeq region 1 4514 . + . ID=NZ_CAJZAS010000050.1:1..4514;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_143 NZ_CAJZAS010000050.1 RefSeq gene 1 2013 . + . ID=gene-LDO45_RS07200;Name=LDO45_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07200;old_locus_tag=BDI4_1430002;partial=true;start_range=.,1 NZ_CAJZAS010000050.1 Protein Homology CDS 1 2013 . + 0 ID=cds-WP_223960821.1;Parent=gene-LDO45_RS07200;Dbxref=GenBank:WP_223960821.1;Name=WP_223960821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659538.1;locus_tag=LDO45_RS07200;partial=true;product=YadA family autotransporter adhesin;protein_id=WP_223960821.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000050.1 RefSeq gene 2137 2811 . + . ID=gene-LDO45_RS07205;Name=LDO45_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07205;old_locus_tag=BDI4_1430003 NZ_CAJZAS010000050.1 Protein Homology CDS 2137 2811 . + 0 ID=cds-WP_059697639.1;Parent=gene-LDO45_RS07205;Dbxref=GenBank:WP_059697639.1;Name=WP_059697639.1;Ontology_term=GO:0015288,GO:0042834;gbkey=CDS;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405964.1;locus_tag=LDO45_RS07205;product=OmpA family protein;protein_id=WP_059697639.1;transl_table=11 NZ_CAJZAS010000050.1 RefSeq pseudogene 3211 4170 . + . ID=gene-LDO45_RS07210;Name=LDO45_RS07210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS07210;pseudo=true NZ_CAJZAS010000050.1 Protein Homology CDS 3211 4170 . + 0 ID=cds-LDO45_RS07210;Parent=gene-LDO45_RS07210;Note=too many ambiguous residues;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216418.1;locus_tag=LDO45_RS07210;product=DUF2827 family protein;pseudo=true;transl_table=11 NZ_CAJZAS010000050.1 RefSeq gene 4185 4514 . + . ID=gene-LDO45_RS07215;Name=LDO45_RS07215;end_range=4514,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07215;partial=true NZ_CAJZAS010000050.1 Protein Homology CDS 4185 4514 . + 0 ID=cds-WP_223960823.1;Parent=gene-LDO45_RS07215;Dbxref=GenBank:WP_223960823.1;Name=WP_223960823.1;end_range=4514,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009899818.1;locus_tag=LDO45_RS07215;partial=true;product=DUF2827 family protein;protein_id=WP_223960823.1;transl_table=11 ##sequence-region NZ_CAJZAS010000051.1 1 2450 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000051.1 RefSeq region 1 2450 . + . ID=NZ_CAJZAS010000051.1:1..2450;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_144 NZ_CAJZAS010000051.1 RefSeq gene 1 1908 . + . ID=gene-LDO45_RS07220;Name=LDO45_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07220;old_locus_tag=BDI4_1440002;partial=true;start_range=.,1 NZ_CAJZAS010000051.1 Protein Homology CDS 1 1908 . + 0 ID=cds-WP_223960825.1;Parent=gene-LDO45_RS07220;Dbxref=GenBank:WP_223960825.1;Name=WP_223960825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493550.1;locus_tag=LDO45_RS07220;partial=true;product=YadA family autotransporter adhesin;protein_id=WP_223960825.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000051.1 RefSeq gene 2149 2450 . + . ID=gene-LDO45_RS07225;Name=LDO45_RS07225;end_range=2450,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07225;partial=true;start_range=.,2149 NZ_CAJZAS010000051.1 Protein Homology CDS 2149 2450 . + 2 ID=cds-WP_223960827.1;Parent=gene-LDO45_RS07225;Dbxref=GenBank:WP_223960827.1;Name=WP_223960827.1;end_range=2450,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216418.1;locus_tag=LDO45_RS07225;partial=true;product=DUF2827 family protein;protein_id=WP_223960827.1;start_range=.,2149;transl_table=11 ##sequence-region NZ_CAJZAS010000052.1 1 14088 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000052.1 RefSeq region 1 14088 . + . ID=NZ_CAJZAS010000052.1:1..14088;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_145 NZ_CAJZAS010000052.1 RefSeq gene 1 2646 . + . ID=gene-LDO45_RS07230;Name=LDO45_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07230;old_locus_tag=BDI4_1450001;partial=true;start_range=.,1 NZ_CAJZAS010000052.1 Protein Homology CDS 1 2646 . + 0 ID=cds-WP_223960829.1;Parent=gene-LDO45_RS07230;Dbxref=GenBank:WP_223960829.1;Name=WP_223960829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898452.1;locus_tag=LDO45_RS07230;partial=true;product=DUF2339 domain-containing protein;protein_id=WP_223960829.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000052.1 RefSeq gene 2643 3995 . + . ID=gene-LDO45_RS07235;Name=LDO45_RS07235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07235;old_locus_tag=BDI4_1450002 NZ_CAJZAS010000052.1 Protein Homology CDS 2643 3995 . + 0 ID=cds-WP_223960831.1;Parent=gene-LDO45_RS07235;Dbxref=GenBank:WP_223960831.1;Name=WP_223960831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724010.1;locus_tag=LDO45_RS07235;product=DUF3999 domain-containing protein;protein_id=WP_223960831.1;transl_table=11 NZ_CAJZAS010000052.1 RefSeq gene 4328 4633 . + . ID=gene-LDO45_RS07240;Name=LDO45_RS07240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07240;old_locus_tag=BDI4_1450003 NZ_CAJZAS010000052.1 Protein Homology CDS 4328 4633 . + 0 ID=cds-WP_059598866.1;Parent=gene-LDO45_RS07240;Dbxref=GenBank:WP_059598866.1;Name=WP_059598866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018907302.1;locus_tag=LDO45_RS07240;product=NIPSNAP family protein;protein_id=WP_059598866.1;transl_table=11 NZ_CAJZAS010000052.1 RefSeq gene 4945 5595 . + . ID=gene-LDO45_RS07245;Name=LDO45_RS07245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07245;old_locus_tag=BDI4_1450004 NZ_CAJZAS010000052.1 Protein Homology CDS 4945 5595 . + 0 ID=cds-WP_059534039.1;Parent=gene-LDO45_RS07245;Dbxref=GenBank:WP_059534039.1;Name=WP_059534039.1;Ontology_term=GO:0008752,GO:0010181,GO:0016491,GO:0052873;gbkey=CDS;go_function=FMN reductase (NAD(P)H) activity|0008752||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749915.1;locus_tag=LDO45_RS07245;product=NADPH-dependent FMN reductase;protein_id=WP_059534039.1;transl_table=11 NZ_CAJZAS010000052.1 RefSeq gene 5819 6037 . + . ID=gene-LDO45_RS07250;Name=LDO45_RS07250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07250;old_locus_tag=BDI4_1450005 NZ_CAJZAS010000052.1 Protein Homology CDS 5819 6037 . + 0 ID=cds-WP_059534037.1;Parent=gene-LDO45_RS07250;Dbxref=GenBank:WP_059534037.1;Name=WP_059534037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898447.1;locus_tag=LDO45_RS07250;product=hypothetical protein;protein_id=WP_059534037.1;transl_table=11 NZ_CAJZAS010000052.1 RefSeq gene 6130 7032 . + . ID=gene-LDO45_RS07255;Name=LDO45_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07255;old_locus_tag=BDI4_1450006 NZ_CAJZAS010000052.1 Protein Homology CDS 6130 7032 . + 0 ID=cds-WP_059534035.1;Parent=gene-LDO45_RS07255;Dbxref=GenBank:WP_059534035.1;Name=WP_059534035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009934541.1;locus_tag=LDO45_RS07255;product=hypothetical protein;protein_id=WP_059534035.1;transl_table=11 NZ_CAJZAS010000052.1 RefSeq gene 8102 13217 . + . ID=gene-LDO45_RS07260;Name=LDO45_RS07260;end_range=13217,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07260;old_locus_tag=BDI4_1450009;partial=true NZ_CAJZAS010000052.1 Protein Homology CDS 8102 13217 . + 0 ID=cds-WP_374109520.1;Parent=gene-LDO45_RS07260;Dbxref=GenBank:WP_374109520.1;Name=WP_374109520.1;end_range=13217,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694851.1;locus_tag=LDO45_RS07260;partial=true;product=ESPR-type extended signal peptide-containing protein;protein_id=WP_374109520.1;transl_table=11 ##sequence-region NZ_CAJZAS010000053.1 1 6183 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000053.1 RefSeq region 1 6183 . + . ID=NZ_CAJZAS010000053.1:1..6183;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_146 NZ_CAJZAS010000053.1 RefSeq gene 115 1149 . - . ID=gene-LDO45_RS07265;Name=LDO45_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07265;old_locus_tag=BDI4_1460001 NZ_CAJZAS010000053.1 Protein Homology CDS 115 1149 . - 0 ID=cds-WP_059692086.1;Parent=gene-LDO45_RS07265;Dbxref=GenBank:WP_059692086.1;Name=WP_059692086.1;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898634.1;locus_tag=LDO45_RS07265;product=AraC family transcriptional regulator;protein_id=WP_059692086.1;transl_table=11 NZ_CAJZAS010000053.1 RefSeq gene 1287 2420 . + . ID=gene-LDO45_RS07270;Name=LDO45_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07270;old_locus_tag=BDI4_1460002 NZ_CAJZAS010000053.1 Protein Homology CDS 1287 2420 . + 0 ID=cds-WP_059527243.1;Parent=gene-LDO45_RS07270;Dbxref=GenBank:WP_059527243.1;Name=WP_059527243.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603915.1;locus_tag=LDO45_RS07270;product=acyl-CoA dehydrogenase family protein;protein_id=WP_059527243.1;transl_table=11 NZ_CAJZAS010000053.1 RefSeq gene 2618 4324 . + . ID=gene-LDO45_RS07275;Name=LDO45_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07275;old_locus_tag=BDI4_1460003 NZ_CAJZAS010000053.1 Protein Homology CDS 2618 4324 . + 0 ID=cds-WP_223960834.1;Parent=gene-LDO45_RS07275;Dbxref=GenBank:WP_223960834.1;Name=WP_223960834.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004530826.1;locus_tag=LDO45_RS07275;product=AMP-binding protein;protein_id=WP_223960834.1;transl_table=11 NZ_CAJZAS010000053.1 RefSeq gene 4434 5963 . + . ID=gene-LDO45_RS07280;Name=LDO45_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07280;old_locus_tag=BDI4_1460004 NZ_CAJZAS010000053.1 Protein Homology CDS 4434 5963 . + 0 ID=cds-WP_059692088.1;Parent=gene-LDO45_RS07280;Dbxref=GenBank:WP_059692088.1;Name=WP_059692088.1;Ontology_term=GO:0018478;gbkey=CDS;go_function=malonate-semialdehyde dehydrogenase (acetylating) activity|0018478||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523210.1;locus_tag=LDO45_RS07280;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_059692088.1;transl_table=11 NZ_CAJZAS010000053.1 RefSeq gene 5982 6183 . + . ID=gene-LDO45_RS07285;Name=LDO45_RS07285;end_range=6183,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07285;partial=true NZ_CAJZAS010000053.1 Protein Homology CDS 5982 6183 . + 0 ID=cds-WP_223960836.1;Parent=gene-LDO45_RS07285;Dbxref=GenBank:WP_223960836.1;Name=WP_223960836.1;Ontology_term=GO:0050661;end_range=6183,.;gbkey=CDS;go_function=NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523211.1;locus_tag=LDO45_RS07285;partial=true;product=NAD(P)-binding domain-containing protein;protein_id=WP_223960836.1;transl_table=11 ##sequence-region NZ_CAJZAS010000054.1 1 5436 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000054.1 RefSeq region 1 5436 . + . ID=NZ_CAJZAS010000054.1:1..5436;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_147 NZ_CAJZAS010000054.1 RefSeq gene 1 708 . + . ID=gene-LDO45_RS07290;Name=LDO45_RS07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07290;old_locus_tag=BDI4_1470001;partial=true;start_range=.,1 NZ_CAJZAS010000054.1 Protein Homology CDS 1 708 . + 0 ID=cds-WP_223960838.1;Parent=gene-LDO45_RS07290;Dbxref=GenBank:WP_223960838.1;Name=WP_223960838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480553.1;locus_tag=LDO45_RS07290;partial=true;product=DUF2827 family protein;protein_id=WP_223960838.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000054.1 RefSeq gene 1460 2263 . + . ID=gene-LDO45_RS07295;Name=LDO45_RS07295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07295;old_locus_tag=BDI4_1470002 NZ_CAJZAS010000054.1 Protein Homology CDS 1460 2263 . + 0 ID=cds-WP_223960840.1;Parent=gene-LDO45_RS07295;Dbxref=GenBank:WP_223960840.1;Name=WP_223960840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366806.1;locus_tag=LDO45_RS07295;product=EAL domain-containing protein;protein_id=WP_223960840.1;transl_table=11 NZ_CAJZAS010000054.1 RefSeq gene 2324 2767 . + . ID=gene-LDO45_RS07300;Name=LDO45_RS07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07300;old_locus_tag=BDI4_1470003 NZ_CAJZAS010000054.1 Protein Homology CDS 2324 2767 . + 0 ID=cds-WP_223960842.1;Parent=gene-LDO45_RS07300;Dbxref=GenBank:WP_223960842.1;Name=WP_223960842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754842.1;locus_tag=LDO45_RS07300;product=hypothetical protein;protein_id=WP_223960842.1;transl_table=11 NZ_CAJZAS010000054.1 RefSeq gene 2810 3136 . - . ID=gene-LDO45_RS07305;Name=LDO45_RS07305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07305;old_locus_tag=BDI4_1470004 NZ_CAJZAS010000054.1 GeneMarkS-2+ CDS 2810 3136 . - 0 ID=cds-WP_223960844.1;Parent=gene-LDO45_RS07305;Dbxref=GenBank:WP_223960844.1;Name=WP_223960844.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS07305;product=hypothetical protein;protein_id=WP_223960844.1;transl_table=11 NZ_CAJZAS010000054.1 RefSeq gene 3361 4497 . - . ID=gene-LDO45_RS07310;Name=LDO45_RS07310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07310;old_locus_tag=BDI4_1470005 NZ_CAJZAS010000054.1 Protein Homology CDS 3361 4497 . - 0 ID=cds-WP_059532471.1;Parent=gene-LDO45_RS07310;Dbxref=GenBank:WP_059532471.1;Name=WP_059532471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331303.1;locus_tag=LDO45_RS07310;product=DUF2827 family protein;protein_id=WP_059532471.1;transl_table=11 NZ_CAJZAS010000054.1 RefSeq gene 4526 4993 . - . ID=gene-LDO45_RS07315;Name=LDO45_RS07315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07315;old_locus_tag=BDI4_1470006 NZ_CAJZAS010000054.1 Protein Homology CDS 4526 4993 . - 0 ID=cds-WP_223960846.1;Parent=gene-LDO45_RS07315;Dbxref=GenBank:WP_223960846.1;Name=WP_223960846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366804.1;locus_tag=LDO45_RS07315;product=DUF4019 domain-containing protein;protein_id=WP_223960846.1;transl_table=11 NZ_CAJZAS010000054.1 RefSeq gene 5019 5436 . - . ID=gene-LDO45_RS07320;Name=LDO45_RS07320;end_range=5436,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07320;partial=true NZ_CAJZAS010000054.1 Protein Homology CDS 5019 5436 . - 1 ID=cds-WP_223960848.1;Parent=gene-LDO45_RS07320;Dbxref=GenBank:WP_223960848.1;Name=WP_223960848.1;end_range=5436,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898439.1;locus_tag=LDO45_RS07320;partial=true;product=DUF2827 family protein;protein_id=WP_223960848.1;transl_table=11 ##sequence-region NZ_CAJZAS010000055.1 1 2314 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000055.1 RefSeq region 1 2314 . + . ID=NZ_CAJZAS010000055.1:1..2314;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_148 NZ_CAJZAS010000055.1 RefSeq gene 1 211 . + . ID=gene-LDO45_RS07325;Name=LDO45_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07325;partial=true;start_range=.,1 NZ_CAJZAS010000055.1 Protein Homology CDS 1 211 . + 1 ID=cds-WP_223960850.1;Parent=gene-LDO45_RS07325;Dbxref=GenBank:WP_223960850.1;Name=WP_223960850.1;Ontology_term=GO:0009055,GO:0020037,GO:0046872;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498275.1;locus_tag=LDO45_RS07325;partial=true;product=cytochrome c family protein;protein_id=WP_223960850.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000055.1 RefSeq gene 225 2314 . + . ID=gene-LDO45_RS07330;Name=ctaD;end_range=2314,.;gbkey=Gene;gene=ctaD;gene_biotype=protein_coding;locus_tag=LDO45_RS07330;partial=true NZ_CAJZAS010000055.1 Protein Homology CDS 225 2314 . + 0 ID=cds-WP_223960852.1;Parent=gene-LDO45_RS07330;Dbxref=GenBank:WP_223960852.1;Name=WP_223960852.1;Ontology_term=GO:0015990,GO:0004129;end_range=2314,.;gbkey=CDS;gene=ctaD;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493757.1;locus_tag=LDO45_RS07330;partial=true;product=cytochrome c oxidase subunit I;protein_id=WP_223960852.1;transl_table=11 ##sequence-region NZ_CAJZAS010000056.1 1 1439 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000056.1 RefSeq region 1 1439 . + . ID=NZ_CAJZAS010000056.1:1..1439;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_149 NZ_CAJZAS010000056.1 RefSeq pseudogene 1 174 . - . ID=gene-LDO45_RS07335;Name=LDO45_RS07335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS07335;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000056.1 Protein Homology CDS 1 174 . - 0 ID=cds-LDO45_RS07335;Parent=gene-LDO45_RS07335;Note=catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896593.1;locus_tag=LDO45_RS07335;partial=true;product=aromatic amino acid aminotransferase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000056.1 RefSeq pseudogene 366 467 . + . ID=gene-LDO45_RS07340;Name=LDO45_RS07340;end_range=467,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS07340;partial=true;pseudo=true NZ_CAJZAS010000056.1 Protein Homology CDS 366 467 . + 0 ID=cds-LDO45_RS07340;Parent=gene-LDO45_RS07340;Note=too many ambiguous residues%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0043565;end_range=467,.;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010110710.1;locus_tag=LDO45_RS07340;partial=true;product=AsnC family transcriptional regulator;pseudo=true;transl_table=11 NZ_CAJZAS010000056.1 RefSeq gene 568 642 . + . ID=gene-LDO45_RS07345;Name=LDO45_RS07345;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS07345;old_locus_tag=BDI4_TRNA28 NZ_CAJZAS010000056.1 tRNAscan-SE tRNA 568 642 . + . ID=rna-LDO45_RS07345;Parent=gene-LDO45_RS07345;anticodon=(pos:600..602);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS07345;product=tRNA-Val NZ_CAJZAS010000056.1 tRNAscan-SE exon 568 642 . + . ID=exon-LDO45_RS07345-1;Parent=rna-LDO45_RS07345;anticodon=(pos:600..602);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS07345;product=tRNA-Val NZ_CAJZAS010000056.1 RefSeq gene 1022 1306 . + . ID=gene-LDO45_RS07350;Name=LDO45_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07350 NZ_CAJZAS010000056.1 Protein Homology CDS 1022 1306 . + 0 ID=cds-WP_253074728.1;Parent=gene-LDO45_RS07350;Dbxref=GenBank:WP_253074728.1;Name=WP_253074728.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013730.5;locus_tag=LDO45_RS07350;product=adenylyl-sulfate kinase;protein_id=WP_253074728.1;transl_table=11 NZ_CAJZAS010000056.1 RefSeq gene 1325 1439 . - . ID=gene-LDO45_RS07355;Name=LDO45_RS07355;end_range=1439,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07355;old_locus_tag=BDI4_1490005;partial=true NZ_CAJZAS010000056.1 Protein Homology CDS 1325 1439 . - 1 ID=cds-WP_223960858.1;Parent=gene-LDO45_RS07355;Dbxref=GenBank:WP_223960858.1;Name=WP_223960858.1;end_range=1439,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478352.1;locus_tag=LDO45_RS07355;partial=true;product=aminotransferase;protein_id=WP_223960858.1;transl_table=11 ##sequence-region NZ_CAJZAS010000057.1 1 2741 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000057.1 RefSeq region 1 2741 . + . ID=NZ_CAJZAS010000057.1:1..2741;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_15 NZ_CAJZAS010000057.1 RefSeq gene 1 2573 . - . ID=gene-LDO45_RS07360;Name=LDO45_RS07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07360;partial=true;start_range=.,1 NZ_CAJZAS010000057.1 Protein Homology CDS 1 2573 . - 0 ID=cds-WP_223960860.1;Parent=gene-LDO45_RS07360;Dbxref=GenBank:WP_223960860.1;Name=WP_223960860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895981.1;locus_tag=LDO45_RS07360;partial=true;product=error-prone DNA polymerase;protein_id=WP_223960860.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000057.1 RefSeq pseudogene 2580 2741 . - . ID=gene-LDO45_RS07365;Name=LDO45_RS07365;end_range=2741,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS07365;partial=true;pseudo=true NZ_CAJZAS010000057.1 Protein Homology CDS 2580 2741 . - 0 ID=cds-LDO45_RS07365;Parent=gene-LDO45_RS07365;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=2741,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723686.1;locus_tag=LDO45_RS07365;partial=true;product=DNA polymerase Y family protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000058.1 1 11202 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000058.1 RefSeq region 1 11202 . + . ID=NZ_CAJZAS010000058.1:1..11202;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_150 NZ_CAJZAS010000058.1 RefSeq gene 185 649 . + . ID=gene-LDO45_RS07370;Name=LDO45_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07370;old_locus_tag=BDI4_1500001 NZ_CAJZAS010000058.1 Protein Homology CDS 185 649 . + 0 ID=cds-WP_223960870.1;Parent=gene-LDO45_RS07370;Dbxref=GenBank:WP_223960870.1;Name=WP_223960870.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402608.1;locus_tag=LDO45_RS07370;product=N-acetyltransferase;protein_id=WP_223960870.1;transl_table=11 NZ_CAJZAS010000058.1 RefSeq gene 688 1566 . - . ID=gene-LDO45_RS07375;Name=LDO45_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07375;old_locus_tag=BDI4_1500002 NZ_CAJZAS010000058.1 Protein Homology CDS 688 1566 . - 0 ID=cds-WP_223960862.1;Parent=gene-LDO45_RS07375;Dbxref=GenBank:WP_223960862.1;Name=WP_223960862.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407735.1;locus_tag=LDO45_RS07375;product=helix-turn-helix domain-containing protein;protein_id=WP_223960862.1;transl_table=11 NZ_CAJZAS010000058.1 RefSeq gene 1868 2281 . + . ID=gene-LDO45_RS07380;Name=LDO45_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07380;old_locus_tag=BDI4_1500003 NZ_CAJZAS010000058.1 Protein Homology CDS 1868 2281 . + 0 ID=cds-WP_059529250.1;Parent=gene-LDO45_RS07380;Dbxref=GenBank:WP_059529250.1;Name=WP_059529250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657314.1;locus_tag=LDO45_RS07380;product=gamma-glutamylcyclotransferase;protein_id=WP_059529250.1;transl_table=11 NZ_CAJZAS010000058.1 RefSeq gene 2414 4006 . - . ID=gene-LDO45_RS07385;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=LDO45_RS07385;old_locus_tag=BDI4_1500004 NZ_CAJZAS010000058.1 Protein Homology CDS 2414 4006 . - 0 ID=cds-WP_223960864.1;Parent=gene-LDO45_RS07385;Dbxref=GenBank:WP_223960864.1;Name=WP_223960864.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026029.1;locus_tag=LDO45_RS07385;product=malate synthase A;protein_id=WP_223960864.1;transl_table=11 NZ_CAJZAS010000058.1 RefSeq gene 4074 4835 . - . ID=gene-LDO45_RS07390;Name=LDO45_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07390;old_locus_tag=BDI4_1500005 NZ_CAJZAS010000058.1 Protein Homology CDS 4074 4835 . - 0 ID=cds-WP_223960866.1;Parent=gene-LDO45_RS07390;Dbxref=GenBank:WP_223960866.1;Name=WP_223960866.1;Ontology_term=GO:0019120;gbkey=CDS;go_function=hydrolase activity%2C acting on acid halide bonds%2C in C-halide compounds|0019120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213122.1;locus_tag=LDO45_RS07390;product=haloacid dehalogenase type II;protein_id=WP_223960866.1;transl_table=11 NZ_CAJZAS010000058.1 RefSeq gene 4989 5894 . + . ID=gene-LDO45_RS07395;Name=LDO45_RS07395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07395;old_locus_tag=BDI4_1500006 NZ_CAJZAS010000058.1 Protein Homology CDS 4989 5894 . + 0 ID=cds-WP_059529255.1;Parent=gene-LDO45_RS07395;Dbxref=GenBank:WP_059529255.1;Name=WP_059529255.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762069.1;locus_tag=LDO45_RS07395;product=LysR family transcriptional regulator;protein_id=WP_059529255.1;transl_table=11 NZ_CAJZAS010000058.1 RefSeq gene 6054 6488 . + . ID=gene-LDO45_RS07400;Name=LDO45_RS07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07400;old_locus_tag=BDI4_1500007 NZ_CAJZAS010000058.1 Protein Homology CDS 6054 6488 . + 0 ID=cds-WP_057929788.1;Parent=gene-LDO45_RS07400;Dbxref=GenBank:WP_057929788.1;Name=WP_057929788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007580518.1;locus_tag=LDO45_RS07400;product=universal stress protein;protein_id=WP_057929788.1;transl_table=11 NZ_CAJZAS010000058.1 RefSeq gene 6713 8020 . - . ID=gene-LDO45_RS07405;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=LDO45_RS07405;old_locus_tag=BDI4_1500008 NZ_CAJZAS010000058.1 Protein Homology CDS 6713 8020 . - 0 ID=cds-WP_059529257.1;Parent=gene-LDO45_RS07405;Dbxref=GenBank:WP_059529257.1;Name=WP_059529257.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009931004.1;locus_tag=LDO45_RS07405;product=isocitrate lyase;protein_id=WP_059529257.1;transl_table=11 NZ_CAJZAS010000058.1 RefSeq gene 8403 9944 . - . ID=gene-LDO45_RS07410;Name=LDO45_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07410;old_locus_tag=BDI4_1500009 NZ_CAJZAS010000058.1 Protein Homology CDS 8403 9944 . - 0 ID=cds-WP_059692009.1;Parent=gene-LDO45_RS07410;Dbxref=GenBank:WP_059692009.1;Name=WP_059692009.1;Ontology_term=GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491421.1;locus_tag=LDO45_RS07410;product=DEAD/DEAH box helicase;protein_id=WP_059692009.1;transl_table=11 NZ_CAJZAS010000058.1 RefSeq gene 10304 10573 . - . ID=gene-LDO45_RS07415;Name=LDO45_RS07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07415;old_locus_tag=BDI4_1500011 NZ_CAJZAS010000058.1 Protein Homology CDS 10304 10573 . - 0 ID=cds-WP_059529263.1;Parent=gene-LDO45_RS07415;Dbxref=GenBank:WP_059529263.1;Name=WP_059529263.1;Ontology_term=GO:0000062;gbkey=CDS;go_function=fatty-acyl-CoA binding|0000062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763999.1;locus_tag=LDO45_RS07415;product=acyl-CoA-binding protein;protein_id=WP_059529263.1;transl_table=11 NZ_CAJZAS010000058.1 RefSeq gene 10721 11202 . + . ID=gene-LDO45_RS07420;Name=tsaB;end_range=11202,.;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=LDO45_RS07420;partial=true NZ_CAJZAS010000058.1 Protein Homology CDS 10721 11202 . + 0 ID=cds-WP_223960868.1;Parent=gene-LDO45_RS07420;Dbxref=GenBank:WP_223960868.1;Name=WP_223960868.1;Ontology_term=GO:0002949;end_range=11202,.;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549519.1;locus_tag=LDO45_RS07420;partial=true;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_223960868.1;transl_table=11 ##sequence-region NZ_CAJZAS010000059.1 1 17998 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000059.1 RefSeq region 1 17998 . + . ID=NZ_CAJZAS010000059.1:1..17998;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_151 NZ_CAJZAS010000059.1 RefSeq gene 1 520 . - . ID=gene-LDO45_RS07425;Name=LDO45_RS07425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07425;partial=true;start_range=.,1 NZ_CAJZAS010000059.1 Protein Homology CDS 1 520 . - 0 ID=cds-WP_223960873.1;Parent=gene-LDO45_RS07425;Dbxref=GenBank:WP_223960873.1;Name=WP_223960873.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194189.1;locus_tag=LDO45_RS07425;partial=true;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_223960873.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000059.1 RefSeq gene 538 954 . - . ID=gene-LDO45_RS07430;Name=LDO45_RS07430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07430;old_locus_tag=BDI4_1510002 NZ_CAJZAS010000059.1 Protein Homology CDS 538 954 . - 0 ID=cds-WP_059535265.1;Parent=gene-LDO45_RS07430;Dbxref=GenBank:WP_059535265.1;Name=WP_059535265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407581.1;locus_tag=LDO45_RS07430;product=glyoxalase/bleomycin resistance/extradiol dioxygenase family protein;protein_id=WP_059535265.1;transl_table=11 NZ_CAJZAS010000059.1 RefSeq gene 1161 2018 . - . ID=gene-LDO45_RS07435;Name=speE;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=LDO45_RS07435;old_locus_tag=BDI4_1510003 NZ_CAJZAS010000059.1 Protein Homology CDS 1161 2018 . - 0 ID=cds-WP_059535267.1;Parent=gene-LDO45_RS07435;Dbxref=GenBank:WP_059535267.1;Name=WP_059535267.1;gbkey=CDS;gene=speE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203762.1;locus_tag=LDO45_RS07435;product=polyamine aminopropyltransferase;protein_id=WP_059535267.1;transl_table=11 NZ_CAJZAS010000059.1 RefSeq gene 2279 4306 . + . ID=gene-LDO45_RS07440;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=LDO45_RS07440;old_locus_tag=BDI4_1510005 NZ_CAJZAS010000059.1 Protein Homology CDS 2279 4306 . + 0 ID=cds-WP_223960875.1;Parent=gene-LDO45_RS07440;Dbxref=GenBank:WP_223960875.1;Name=WP_223960875.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424068.1;locus_tag=LDO45_RS07440;product=transketolase;protein_id=WP_223960875.1;transl_table=11 NZ_CAJZAS010000059.1 RefSeq gene 4393 5403 . + . ID=gene-LDO45_RS07445;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=LDO45_RS07445;old_locus_tag=BDI4_1510006 NZ_CAJZAS010000059.1 Protein Homology CDS 4393 5403 . + 0 ID=cds-WP_006476940.1;Parent=gene-LDO45_RS07445;Dbxref=GenBank:WP_006476940.1;Name=WP_006476940.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883251.1;locus_tag=LDO45_RS07445;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_006476940.1;transl_table=11 NZ_CAJZAS010000059.1 RefSeq gene 5481 6371 . - . ID=gene-LDO45_RS07450;Name=LDO45_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07450;old_locus_tag=BDI4_1510007 NZ_CAJZAS010000059.1 Protein Homology CDS 5481 6371 . - 0 ID=cds-WP_223960889.1;Parent=gene-LDO45_RS07450;Dbxref=GenBank:WP_223960889.1;Name=WP_223960889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496730.1;locus_tag=LDO45_RS07450;product=LysR family transcriptional regulator;protein_id=WP_223960889.1;transl_table=11 NZ_CAJZAS010000059.1 RefSeq gene 6517 7290 . + . ID=gene-LDO45_RS07455;Name=LDO45_RS07455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07455;old_locus_tag=BDI4_1510008 NZ_CAJZAS010000059.1 Protein Homology CDS 6517 7290 . + 0 ID=cds-WP_223960877.1;Parent=gene-LDO45_RS07455;Dbxref=GenBank:WP_223960877.1;Name=WP_223960877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492962.1;locus_tag=LDO45_RS07455;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_223960877.1;transl_table=11 NZ_CAJZAS010000059.1 RefSeq gene 7300 8358 . + . ID=gene-LDO45_RS07460;Name=LDO45_RS07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07460;old_locus_tag=BDI4_1510009 NZ_CAJZAS010000059.1 Protein Homology CDS 7300 8358 . + 0 ID=cds-WP_223960879.1;Parent=gene-LDO45_RS07460;Dbxref=GenBank:WP_223960879.1;Name=WP_223960879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327885.1;locus_tag=LDO45_RS07460;product=L-idonate 5-dehydrogenase;protein_id=WP_223960879.1;transl_table=11 NZ_CAJZAS010000059.1 RefSeq gene 8451 9650 . - . ID=gene-LDO45_RS07465;Name=LDO45_RS07465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07465;old_locus_tag=BDI4_1510010 NZ_CAJZAS010000059.1 Protein Homology CDS 8451 9650 . - 0 ID=cds-WP_223960881.1;Parent=gene-LDO45_RS07465;Dbxref=GenBank:WP_223960881.1;Name=WP_223960881.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214132.1;locus_tag=LDO45_RS07465;product=MFS transporter;protein_id=WP_223960881.1;transl_table=11 NZ_CAJZAS010000059.1 RefSeq gene 9964 10854 . + . ID=gene-LDO45_RS07470;Name=cynR;gbkey=Gene;gene=cynR;gene_biotype=protein_coding;locus_tag=LDO45_RS07470;old_locus_tag=BDI4_1510011 NZ_CAJZAS010000059.1 Protein Homology CDS 9964 10854 . + 0 ID=cds-WP_059689081.1;Parent=gene-LDO45_RS07470;Dbxref=GenBank:WP_059689081.1;Name=WP_059689081.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cynR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350921.1;locus_tag=LDO45_RS07470;product=transcriptional regulator CynR;protein_id=WP_059689081.1;transl_table=11 NZ_CAJZAS010000059.1 RefSeq gene 10912 11634 . - . ID=gene-LDO45_RS07475;Name=LDO45_RS07475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07475;old_locus_tag=BDI4_1510012 NZ_CAJZAS010000059.1 Protein Homology CDS 10912 11634 . - 0 ID=cds-WP_175911119.1;Parent=gene-LDO45_RS07475;Dbxref=GenBank:WP_175911119.1;Name=WP_175911119.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407575.1;locus_tag=LDO45_RS07475;product=FadR/GntR family transcriptional regulator;protein_id=WP_175911119.1;transl_table=11 NZ_CAJZAS010000059.1 RefSeq gene 11823 13142 . + . ID=gene-LDO45_RS07480;Name=LDO45_RS07480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07480;old_locus_tag=BDI4_1510013 NZ_CAJZAS010000059.1 Protein Homology CDS 11823 13142 . + 0 ID=cds-WP_223960883.1;Parent=gene-LDO45_RS07480;Dbxref=GenBank:WP_223960883.1;Name=WP_223960883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350923.1;locus_tag=LDO45_RS07480;product=C4-dicarboxylate transporter DctA;protein_id=WP_223960883.1;transl_table=11 NZ_CAJZAS010000059.1 RefSeq gene 13244 14251 . + . ID=gene-LDO45_RS07485;Name=alc;gbkey=Gene;gene=alc;gene_biotype=protein_coding;locus_tag=LDO45_RS07485;old_locus_tag=BDI4_1510014 NZ_CAJZAS010000059.1 Protein Homology CDS 13244 14251 . + 0 ID=cds-WP_223960885.1;Parent=gene-LDO45_RS07485;Dbxref=GenBank:WP_223960885.1;Name=WP_223960885.1;Ontology_term=GO:0000256,GO:0004037;gbkey=CDS;gene=alc;go_function=allantoicase activity|0004037||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476931.1;locus_tag=LDO45_RS07485;product=allantoicase;protein_id=WP_223960885.1;transl_table=11 NZ_CAJZAS010000059.1 RefSeq gene 14265 14789 . + . ID=gene-LDO45_RS07490;Name=LDO45_RS07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07490;old_locus_tag=BDI4_1510015 NZ_CAJZAS010000059.1 Protein Homology CDS 14265 14789 . + 0 ID=cds-WP_059535280.1;Parent=gene-LDO45_RS07490;Dbxref=GenBank:WP_059535280.1;Name=WP_059535280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091325.1;locus_tag=LDO45_RS07490;product=ureidoglycolate lyase;protein_id=WP_059535280.1;transl_table=11 NZ_CAJZAS010000059.1 RefSeq gene 14983 15411 . - . ID=gene-LDO45_RS07495;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=LDO45_RS07495;old_locus_tag=BDI4_1510016 NZ_CAJZAS010000059.1 Protein Homology CDS 14983 15411 . - 0 ID=cds-WP_006753314.1;Parent=gene-LDO45_RS07495;Dbxref=GenBank:WP_006753314.1;Name=WP_006753314.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006051897.1;locus_tag=LDO45_RS07495;product=ferric iron uptake transcriptional regulator;protein_id=WP_006753314.1;transl_table=11 NZ_CAJZAS010000059.1 RefSeq gene 15554 16357 . + . ID=gene-LDO45_RS07500;Name=LDO45_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07500;old_locus_tag=BDI4_1510017 NZ_CAJZAS010000059.1 Protein Homology CDS 15554 16357 . + 0 ID=cds-WP_059535282.1;Parent=gene-LDO45_RS07500;Dbxref=GenBank:WP_059535282.1;Name=WP_059535282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400348.1;locus_tag=LDO45_RS07500;product=outer membrane protein assembly factor BamE;protein_id=WP_059535282.1;transl_table=11 NZ_CAJZAS010000059.1 RefSeq gene 16423 17220 . + . ID=gene-LDO45_RS07505;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=LDO45_RS07505;old_locus_tag=BDI4_1510018 NZ_CAJZAS010000059.1 Protein Homology CDS 16423 17220 . + 0 ID=cds-WP_059535284.1;Parent=gene-LDO45_RS07505;Dbxref=GenBank:WP_059535284.1;Name=WP_059535284.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762730.1;locus_tag=LDO45_RS07505;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_059535284.1;transl_table=11 NZ_CAJZAS010000059.1 RefSeq gene 17240 17908 . + . ID=gene-LDO45_RS07510;Name=LDO45_RS07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07510;old_locus_tag=BDI4_1510019 NZ_CAJZAS010000059.1 Protein Homology CDS 17240 17908 . + 0 ID=cds-WP_223960887.1;Parent=gene-LDO45_RS07510;Dbxref=GenBank:WP_223960887.1;Name=WP_223960887.1;Ontology_term=GO:0015031,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476926.1;locus_tag=LDO45_RS07510;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_223960887.1;transl_table=11 NZ_CAJZAS010000059.1 RefSeq pseudogene 17931 17998 . + . ID=gene-LDO45_RS07515;Name=LDO45_RS07515;end_range=17998,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS07515;partial=true;pseudo=true NZ_CAJZAS010000059.1 Protein Homology CDS 17931 17998 . + 0 ID=cds-LDO45_RS07515;Parent=gene-LDO45_RS07515;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=17998,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883260.1;locus_tag=LDO45_RS07515;partial=true;product=biopolymer transporter ExbD;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000060.1 1 10970 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000060.1 RefSeq region 1 10970 . + . ID=NZ_CAJZAS010000060.1:1..10970;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_152 NZ_CAJZAS010000060.1 RefSeq gene 1 598 . - . ID=gene-LDO45_RS07520;Name=LDO45_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07520;partial=true;start_range=.,1 NZ_CAJZAS010000060.1 Protein Homology CDS 1 598 . - 0 ID=cds-WP_223960892.1;Parent=gene-LDO45_RS07520;Dbxref=GenBank:WP_223960892.1;Name=WP_223960892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491361.1;locus_tag=LDO45_RS07520;partial=true;product=MFS transporter;protein_id=WP_223960892.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000060.1 RefSeq gene 700 1578 . + . ID=gene-LDO45_RS07525;Name=LDO45_RS07525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07525;old_locus_tag=BDI4_1520002 NZ_CAJZAS010000060.1 Protein Homology CDS 700 1578 . + 0 ID=cds-WP_223960894.1;Parent=gene-LDO45_RS07525;Dbxref=GenBank:WP_223960894.1;Name=WP_223960894.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762614.1;locus_tag=LDO45_RS07525;product=LysR family transcriptional regulator;protein_id=WP_223960894.1;transl_table=11 NZ_CAJZAS010000060.1 RefSeq gene 1805 2794 . + . ID=gene-LDO45_RS07530;Name=LDO45_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07530;old_locus_tag=BDI4_1520003 NZ_CAJZAS010000060.1 Protein Homology CDS 1805 2794 . + 0 ID=cds-WP_223960896.1;Parent=gene-LDO45_RS07530;Dbxref=GenBank:WP_223960896.1;Name=WP_223960896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881904.1;locus_tag=LDO45_RS07530;product=ABC transporter substrate-binding protein;protein_id=WP_223960896.1;transl_table=11 NZ_CAJZAS010000060.1 RefSeq gene 2811 2951 . - . ID=gene-LDO45_RS07535;Name=LDO45_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07535;old_locus_tag=BDI4_1520004 NZ_CAJZAS010000060.1 GeneMarkS-2+ CDS 2811 2951 . - 0 ID=cds-WP_223960907.1;Parent=gene-LDO45_RS07535;Dbxref=GenBank:WP_223960907.1;Name=WP_223960907.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS07535;product=hypothetical protein;protein_id=WP_223960907.1;transl_table=11 NZ_CAJZAS010000060.1 RefSeq gene 3217 4293 . + . ID=gene-LDO45_RS07540;Name=LDO45_RS07540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07540;old_locus_tag=BDI4_1520005 NZ_CAJZAS010000060.1 Protein Homology CDS 3217 4293 . + 0 ID=cds-WP_059524863.1;Parent=gene-LDO45_RS07540;Dbxref=GenBank:WP_059524863.1;Name=WP_059524863.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760803.1;locus_tag=LDO45_RS07540;product=glycosyltransferase family 2 protein;protein_id=WP_059524863.1;transl_table=11 NZ_CAJZAS010000060.1 RefSeq gene 4310 5572 . + . ID=gene-LDO45_RS07545;Name=LDO45_RS07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07545;old_locus_tag=BDI4_1520006 NZ_CAJZAS010000060.1 Protein Homology CDS 4310 5572 . + 0 ID=cds-WP_223960898.1;Parent=gene-LDO45_RS07545;Dbxref=GenBank:WP_223960898.1;Name=WP_223960898.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658456.1;locus_tag=LDO45_RS07545;product=glycosyltransferase family 87 protein;protein_id=WP_223960898.1;transl_table=11 NZ_CAJZAS010000060.1 RefSeq gene 5536 6576 . - . ID=gene-LDO45_RS07550;Name=LDO45_RS07550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07550;old_locus_tag=BDI4_1520007 NZ_CAJZAS010000060.1 Protein Homology CDS 5536 6576 . - 0 ID=cds-WP_223960901.1;Parent=gene-LDO45_RS07550;Dbxref=GenBank:WP_223960901.1;Name=WP_223960901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899757.1;locus_tag=LDO45_RS07550;product=TadG family pilus assembly protein;protein_id=WP_223960901.1;transl_table=11 NZ_CAJZAS010000060.1 RefSeq gene 6569 6997 . - . ID=gene-LDO45_RS07555;Name=LDO45_RS07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07555;old_locus_tag=BDI4_1520008 NZ_CAJZAS010000060.1 Protein Homology CDS 6569 6997 . - 0 ID=cds-WP_223960903.1;Parent=gene-LDO45_RS07555;Dbxref=GenBank:WP_223960903.1;Name=WP_223960903.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009917531.1;locus_tag=LDO45_RS07555;product=TadE/TadG family type IV pilus assembly protein;protein_id=WP_223960903.1;transl_table=11 NZ_CAJZAS010000060.1 RefSeq gene 6994 7851 . - . ID=gene-LDO45_RS07560;Name=LDO45_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07560;old_locus_tag=BDI4_1520009 NZ_CAJZAS010000060.1 Protein Homology CDS 6994 7851 . - 0 ID=cds-WP_175906351.1;Parent=gene-LDO45_RS07560;Dbxref=GenBank:WP_175906351.1;Name=WP_175906351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760799.1;locus_tag=LDO45_RS07560;product=lipopolysaccharide assembly protein LapB;protein_id=WP_175906351.1;transl_table=11 NZ_CAJZAS010000060.1 RefSeq gene 7848 8792 . - . ID=gene-LDO45_RS07565;Name=LDO45_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07565;old_locus_tag=BDI4_1520010 NZ_CAJZAS010000060.1 Protein Homology CDS 7848 8792 . - 0 ID=cds-WP_059689809.1;Parent=gene-LDO45_RS07565;Dbxref=GenBank:WP_059689809.1;Name=WP_059689809.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760798.1;locus_tag=LDO45_RS07565;product=type II secretion system F family protein;protein_id=WP_059689809.1;transl_table=11 NZ_CAJZAS010000060.1 RefSeq gene 8789 9766 . - . ID=gene-LDO45_RS07570;Name=LDO45_RS07570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07570;old_locus_tag=BDI4_1520011 NZ_CAJZAS010000060.1 Protein Homology CDS 8789 9766 . - 0 ID=cds-WP_223960905.1;Parent=gene-LDO45_RS07570;Dbxref=GenBank:WP_223960905.1;Name=WP_223960905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365758.1;locus_tag=LDO45_RS07570;product=type II secretion system F family protein;protein_id=WP_223960905.1;transl_table=11 NZ_CAJZAS010000060.1 RefSeq gene 9763 10970 . - . ID=gene-LDO45_RS07575;Name=LDO45_RS07575;end_range=10970,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07575;old_locus_tag=BDI4_1520012;partial=true NZ_CAJZAS010000060.1 Protein Homology CDS 9763 10970 . - 2 ID=cds-WP_223960906.1;Parent=gene-LDO45_RS07575;Dbxref=GenBank:WP_223960906.1;Name=WP_223960906.1;end_range=10970,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760796.1;locus_tag=LDO45_RS07575;partial=true;product=CpaF family protein;protein_id=WP_223960906.1;transl_table=11 ##sequence-region NZ_CAJZAS010000061.1 1 21373 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000061.1 RefSeq region 1 21373 . + . ID=NZ_CAJZAS010000061.1:1..21373;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_153 NZ_CAJZAS010000061.1 RefSeq gene 1 510 . - . ID=gene-LDO45_RS07580;Name=LDO45_RS07580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07580;partial=true;start_range=.,1 NZ_CAJZAS010000061.1 Protein Homology CDS 1 510 . - 0 ID=cds-WP_223960909.1;Parent=gene-LDO45_RS07580;Dbxref=GenBank:WP_223960909.1;Name=WP_223960909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493029.1;locus_tag=LDO45_RS07580;partial=true;product=polysaccharide pyruvyl transferase family protein;protein_id=WP_223960909.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000061.1 RefSeq gene 507 1706 . - . ID=gene-LDO45_RS07585;Name=LDO45_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07585;old_locus_tag=BDI4_1530002 NZ_CAJZAS010000061.1 Protein Homology CDS 507 1706 . - 0 ID=cds-WP_223960912.1;Parent=gene-LDO45_RS07585;Dbxref=GenBank:WP_223960912.1;Name=WP_223960912.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483305.1;locus_tag=LDO45_RS07585;product=glycosyltransferase family 4 protein;protein_id=WP_223960912.1;transl_table=11 NZ_CAJZAS010000061.1 RefSeq gene 1703 3973 . - . ID=gene-LDO45_RS07590;Name=LDO45_RS07590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07590;old_locus_tag=BDI4_1530003 NZ_CAJZAS010000061.1 Protein Homology CDS 1703 3973 . - 0 ID=cds-WP_223960914.1;Parent=gene-LDO45_RS07590;Dbxref=GenBank:WP_223960914.1;Name=WP_223960914.1;Ontology_term=GO:0045226;gbkey=CDS;go_process=extracellular polysaccharide biosynthetic process|0045226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749388.1;locus_tag=LDO45_RS07590;product=polysaccharide biosynthesis tyrosine autokinase;protein_id=WP_223960914.1;transl_table=11 NZ_CAJZAS010000061.1 RefSeq gene 3970 4467 . - . ID=gene-LDO45_RS07595;Name=LDO45_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07595;old_locus_tag=BDI4_1530004 NZ_CAJZAS010000061.1 Protein Homology CDS 3970 4467 . - 0 ID=cds-WP_223960916.1;Parent=gene-LDO45_RS07595;Dbxref=GenBank:WP_223960916.1;Name=WP_223960916.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479965.1;locus_tag=LDO45_RS07595;product=low molecular weight protein-tyrosine-phosphatase;protein_id=WP_223960916.1;transl_table=11 NZ_CAJZAS010000061.1 RefSeq gene 4464 5654 . - . ID=gene-LDO45_RS07600;Name=LDO45_RS07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07600;old_locus_tag=BDI4_1530005 NZ_CAJZAS010000061.1 Protein Homology CDS 4464 5654 . - 0 ID=cds-WP_223960918.1;Parent=gene-LDO45_RS07600;Dbxref=GenBank:WP_223960918.1;Name=WP_223960918.1;Ontology_term=GO:0015774,GO:0015159,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=polysaccharide transmembrane transporter activity|0015159||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489574.1;locus_tag=LDO45_RS07600;product=polysaccharide biosynthesis/export family protein;protein_id=WP_223960918.1;transl_table=11 NZ_CAJZAS010000061.1 RefSeq gene 5783 7171 . - . ID=gene-LDO45_RS07605;Name=LDO45_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07605;old_locus_tag=BDI4_1530006 NZ_CAJZAS010000061.1 Protein Homology CDS 5783 7171 . - 0 ID=cds-WP_223960920.1;Parent=gene-LDO45_RS07605;Dbxref=GenBank:WP_223960920.1;Name=WP_223960920.1;Ontology_term=GO:0016780;gbkey=CDS;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489565.1;locus_tag=LDO45_RS07605;product=undecaprenyl-phosphate glucose phosphotransferase;protein_id=WP_223960920.1;transl_table=11 NZ_CAJZAS010000061.1 RefSeq gene 7499 7747 . - . ID=gene-LDO45_RS07610;Name=LDO45_RS07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07610 NZ_CAJZAS010000061.1 GeneMarkS-2+ CDS 7499 7747 . - 0 ID=cds-WP_223960922.1;Parent=gene-LDO45_RS07610;Dbxref=GenBank:WP_223960922.1;Name=WP_223960922.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS07610;product=hypothetical protein;protein_id=WP_223960922.1;transl_table=11 NZ_CAJZAS010000061.1 RefSeq gene 7790 8617 . + . ID=gene-LDO45_RS07615;Name=LDO45_RS07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07615;old_locus_tag=BDI4_1530007 NZ_CAJZAS010000061.1 Protein Homology CDS 7790 8617 . + 0 ID=cds-WP_223960924.1;Parent=gene-LDO45_RS07615;Dbxref=GenBank:WP_223960924.1;Name=WP_223960924.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338882.1;locus_tag=LDO45_RS07615;product=peptidyl-prolyl cis-trans isomerase;protein_id=WP_223960924.1;transl_table=11 NZ_CAJZAS010000061.1 RefSeq gene 9074 9685 . + . ID=gene-LDO45_RS07620;Name=LDO45_RS07620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07620;old_locus_tag=BDI4_1530009 NZ_CAJZAS010000061.1 Protein Homology CDS 9074 9685 . + 0 ID=cds-WP_223960926.1;Parent=gene-LDO45_RS07620;Dbxref=GenBank:WP_223960926.1;Name=WP_223960926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009898672.1;locus_tag=LDO45_RS07620;product=cysteine hydrolase family protein;protein_id=WP_223960926.1;transl_table=11 NZ_CAJZAS010000061.1 RefSeq gene 9748 10407 . + . ID=gene-LDO45_RS07625;Name=LDO45_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07625;old_locus_tag=BDI4_1530010 NZ_CAJZAS010000061.1 Protein Homology CDS 9748 10407 . + 0 ID=cds-WP_223960932.1;Parent=gene-LDO45_RS07625;Dbxref=GenBank:WP_223960932.1;Name=WP_223960932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338863.1;locus_tag=LDO45_RS07625;product=cysteine hydrolase family protein;protein_id=WP_223960932.1;transl_table=11 NZ_CAJZAS010000061.1 RefSeq gene 10463 11356 . + . ID=gene-LDO45_RS07630;Name=LDO45_RS07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07630;old_locus_tag=BDI4_1530011 NZ_CAJZAS010000061.1 Protein Homology CDS 10463 11356 . + 0 ID=cds-WP_223960928.1;Parent=gene-LDO45_RS07630;Dbxref=GenBank:WP_223960928.1;Name=WP_223960928.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338864.1;locus_tag=LDO45_RS07630;product=LysR family transcriptional regulator;protein_id=WP_223960928.1;transl_table=11 NZ_CAJZAS010000061.1 RefSeq pseudogene 11418 11601 . - . ID=gene-LDO45_RS07635;Name=LDO45_RS07635;end_range=11601,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS07635;partial=true;pseudo=true;start_range=.,11418 NZ_CAJZAS010000061.1 Protein Homology CDS 11418 11601 . - 0 ID=cds-LDO45_RS07635;Parent=gene-LDO45_RS07635;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=11601,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005732991.1;locus_tag=LDO45_RS07635;partial=true;product=XRE family transcriptional regulator;pseudo=true;start_range=.,11418;transl_table=11 NZ_CAJZAS010000061.1 RefSeq gene 11626 14649 . - . ID=gene-LDO45_RS07640;Name=LDO45_RS07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07640;old_locus_tag=BDI4_1530012 NZ_CAJZAS010000061.1 Protein Homology CDS 11626 14649 . - 0 ID=cds-WP_223960930.1;Parent=gene-LDO45_RS07640;Dbxref=GenBank:WP_223960930.1;Name=WP_223960930.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479953.1;locus_tag=LDO45_RS07640;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_223960930.1;transl_table=11 NZ_CAJZAS010000061.1 RefSeq gene 15117 20920 . + . ID=gene-LDO45_RS07645;Name=LDO45_RS07645;end_range=20920,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07645;old_locus_tag=BDI4_1530014;partial=true NZ_CAJZAS010000061.1 Protein Homology CDS 15117 20920 . + 0 ID=cds-WP_290371001.1;Parent=gene-LDO45_RS07645;Dbxref=GenBank:WP_290371001.1;Name=WP_290371001.1;end_range=20920,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024418.5;locus_tag=LDO45_RS07645;partial=true;product=ESPR-type extended signal peptide-containing protein;protein_id=WP_290371001.1;transl_table=11 NZ_CAJZAS010000061.1 RefSeq pseudogene 20954 21373 . + . ID=gene-LDO45_RS34220;Name=LDO45_RS34220;end_range=21373,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34220;partial=true;pseudo=true NZ_CAJZAS010000061.1 Protein Homology CDS 20954 21373 . + 0 ID=cds-LDO45_RS34220;Parent=gene-LDO45_RS34220;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=21373,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017476.5;locus_tag=LDO45_RS34220;partial=true;product=adhesin;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000062.1 1 619 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000062.1 RefSeq region 1 619 . + . ID=NZ_CAJZAS010000062.1:1..619;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_154 NZ_CAJZAS010000062.1 RefSeq pseudogene 160 619 . + . ID=gene-LDO45_RS07660;Name=LDO45_RS07660;end_range=619,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS07660;partial=true;pseudo=true NZ_CAJZAS010000062.1 Protein Homology CDS 160 619 . + 0 ID=cds-LDO45_RS07660;Parent=gene-LDO45_RS07660;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=619,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017476.5;locus_tag=LDO45_RS07660;partial=true;product=adhesin;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000063.1 1 6387 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000063.1 RefSeq region 1 6387 . + . ID=NZ_CAJZAS010000063.1:1..6387;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_155 NZ_CAJZAS010000063.1 RefSeq pseudogene 1 124 . - . ID=gene-LDO45_RS34385;Name=LDO45_RS34385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34385;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000063.1 Protein Homology CDS 1 124 . - 0 ID=cds-LDO45_RS34385;Parent=gene-LDO45_RS34385;Note=catalyzes the formation of cobalt-precorrin 4 from cobalt-precorrin 3%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545388.1;locus_tag=LDO45_RS34385;partial=true;product=cobalamin biosynthesis protein CbiG;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000063.1 RefSeq gene 121 870 . - . ID=gene-LDO45_RS07665;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=LDO45_RS07665;old_locus_tag=BDI4_1550002 NZ_CAJZAS010000063.1 Protein Homology CDS 121 870 . - 0 ID=cds-WP_223960936.1;Parent=gene-LDO45_RS07665;Dbxref=GenBank:WP_223960936.1;Name=WP_223960936.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694284.1;locus_tag=LDO45_RS07665;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_223960936.1;transl_table=11 NZ_CAJZAS010000063.1 cmsearch riboswitch 1040 1276 . - . ID=id-NZ_CAJZAS010000063.1:1040..1276;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAS010000063.1 cmsearch riboswitch 1402 1665 . + . ID=id-NZ_CAJZAS010000063.1:1402..1665;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAS010000063.1 RefSeq gene 1850 2908 . + . ID=gene-LDO45_RS07670;Name=LDO45_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07670;old_locus_tag=BDI4_1550004 NZ_CAJZAS010000063.1 Protein Homology CDS 1850 2908 . + 0 ID=cds-WP_223960938.1;Parent=gene-LDO45_RS07670;Dbxref=GenBank:WP_223960938.1;Name=WP_223960938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004266608.1;locus_tag=LDO45_RS07670;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_223960938.1;transl_table=11 NZ_CAJZAS010000063.1 RefSeq gene 2934 4022 . + . ID=gene-LDO45_RS07675;Name=cobW;gbkey=Gene;gene=cobW;gene_biotype=protein_coding;locus_tag=LDO45_RS07675;old_locus_tag=BDI4_1550005 NZ_CAJZAS010000063.1 Protein Homology CDS 2934 4022 . + 0 ID=cds-WP_223960940.1;Parent=gene-LDO45_RS07675;Dbxref=GenBank:WP_223960940.1;Name=WP_223960940.1;Ontology_term=GO:0009236;gbkey=CDS;gene=cobW;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004531257.1;locus_tag=LDO45_RS07675;product=cobalamin biosynthesis protein CobW;protein_id=WP_223960940.1;transl_table=11 NZ_CAJZAS010000063.1 RefSeq gene 4029 6387 . + . ID=gene-LDO45_RS07680;Name=cobN;end_range=6387,.;gbkey=Gene;gene=cobN;gene_biotype=protein_coding;locus_tag=LDO45_RS07680;old_locus_tag=BDI4_1550006;partial=true NZ_CAJZAS010000063.1 Protein Homology CDS 4029 6387 . + 0 ID=cds-WP_223960942.1;Parent=gene-LDO45_RS07680;Dbxref=GenBank:WP_223960942.1;Name=WP_223960942.1;Ontology_term=GO:0009236,GO:0051116;end_range=6387,.;gbkey=CDS;gene=cobN;go_function=cobaltochelatase activity|0051116||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213350.1;locus_tag=LDO45_RS07680;partial=true;product=cobaltochelatase subunit CobN;protein_id=WP_223960942.1;transl_table=11 ##sequence-region NZ_CAJZAS010000064.1 1 2286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000064.1 RefSeq region 1 2286 . + . ID=NZ_CAJZAS010000064.1:1..2286;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_156 NZ_CAJZAS010000064.1 RefSeq pseudogene 1 378 . - . ID=gene-LDO45_RS07685;Name=LDO45_RS07685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS07685;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000064.1 Protein Homology CDS 1 378 . - 0 ID=cds-LDO45_RS07685;Parent=gene-LDO45_RS07685;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364711.1;locus_tag=LDO45_RS07685;partial=true;product=endoribonuclease L-PSP;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000064.1 RefSeq gene 476 1192 . - . ID=gene-LDO45_RS07690;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=LDO45_RS07690;old_locus_tag=BDI4_1560002 NZ_CAJZAS010000064.1 Protein Homology CDS 476 1192 . - 0 ID=cds-WP_059528261.1;Parent=gene-LDO45_RS07690;Dbxref=GenBank:WP_059528261.1;Name=WP_059528261.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fabG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755110.1;locus_tag=LDO45_RS07690;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_059528261.1;transl_table=11 NZ_CAJZAS010000064.1 RefSeq gene 1308 1592 . - . ID=gene-LDO45_RS07695;Name=LDO45_RS07695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07695;old_locus_tag=BDI4_1560003 NZ_CAJZAS010000064.1 Protein Homology CDS 1308 1592 . - 0 ID=cds-WP_082722004.1;Parent=gene-LDO45_RS07695;Dbxref=GenBank:WP_082722004.1;Name=WP_082722004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896047.1;locus_tag=LDO45_RS07695;product=phosphopantetheine-binding protein;protein_id=WP_082722004.1;transl_table=11 ##sequence-region NZ_CAJZAS010000065.1 1 28825 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000065.1 RefSeq region 1 28825 . + . ID=NZ_CAJZAS010000065.1:1..28825;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_157 NZ_CAJZAS010000065.1 RefSeq pseudogene 451 731 . + . ID=gene-LDO45_RS07700;Name=LDO45_RS07700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS07700;partial=true;pseudo=true;start_range=.,451 NZ_CAJZAS010000065.1 Protein Homology CDS 451 731 . + 0 ID=cds-LDO45_RS07700;Parent=gene-LDO45_RS07700;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350266.1;locus_tag=LDO45_RS07700;partial=true;product=RNA-directed DNA polymerase;pseudo=true;start_range=.,451;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 1044 1373 . + . ID=gene-LDO45_RS07705;Name=LDO45_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07705;old_locus_tag=BDI4_1570002 NZ_CAJZAS010000065.1 Protein Homology CDS 1044 1373 . + 0 ID=cds-WP_059525998.1;Parent=gene-LDO45_RS07705;Dbxref=GenBank:WP_059525998.1;Name=WP_059525998.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760669.1;locus_tag=LDO45_RS07705;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_059525998.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 1642 2889 . + . ID=gene-LDO45_RS07710;Name=LDO45_RS07710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07710;old_locus_tag=BDI4_1570003 NZ_CAJZAS010000065.1 Protein Homology CDS 1642 2889 . + 0 ID=cds-WP_223960944.1;Parent=gene-LDO45_RS07710;Dbxref=GenBank:WP_223960944.1;Name=WP_223960944.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405387.1;locus_tag=LDO45_RS07710;product=MFS transporter;protein_id=WP_223960944.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 2966 3532 . + . ID=gene-LDO45_RS07715;Name=LDO45_RS07715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07715;old_locus_tag=BDI4_1570004 NZ_CAJZAS010000065.1 Protein Homology CDS 2966 3532 . + 0 ID=cds-WP_059693660.1;Parent=gene-LDO45_RS07715;Dbxref=GenBank:WP_059693660.1;Name=WP_059693660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493675.1;locus_tag=LDO45_RS07715;product=hypothetical protein;protein_id=WP_059693660.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 3562 4680 . - . ID=gene-LDO45_RS07720;Name=LDO45_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07720;old_locus_tag=BDI4_1570005 NZ_CAJZAS010000065.1 Protein Homology CDS 3562 4680 . - 0 ID=cds-WP_223960946.1;Parent=gene-LDO45_RS07720;Dbxref=GenBank:WP_223960946.1;Name=WP_223960946.1;Ontology_term=GO:0015846,GO:0019808,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350251.1;locus_tag=LDO45_RS07720;product=polyamine ABC transporter substrate-binding protein;protein_id=WP_223960946.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 4874 5161 . - . ID=gene-LDO45_RS07725;Name=LDO45_RS07725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07725;old_locus_tag=BDI4_1570006 NZ_CAJZAS010000065.1 GeneMarkS-2+ CDS 4874 5161 . - 0 ID=cds-WP_218921330.1;Parent=gene-LDO45_RS07725;Dbxref=GenBank:WP_218921330.1;Name=WP_218921330.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS07725;product=hypothetical protein;protein_id=WP_218921330.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 5493 6185 . - . ID=gene-LDO45_RS07730;Name=LDO45_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07730;old_locus_tag=BDI4_1570007 NZ_CAJZAS010000065.1 Protein Homology CDS 5493 6185 . - 0 ID=cds-WP_223960948.1;Parent=gene-LDO45_RS07730;Dbxref=GenBank:WP_223960948.1;Name=WP_223960948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484829.1;locus_tag=LDO45_RS07730;product=pentapeptide repeat-containing protein;protein_id=WP_223960948.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 6270 6908 . - . ID=gene-LDO45_RS07735;Name=LDO45_RS07735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07735;old_locus_tag=BDI4_1570008 NZ_CAJZAS010000065.1 Protein Homology CDS 6270 6908 . - 0 ID=cds-WP_223960949.1;Parent=gene-LDO45_RS07735;Dbxref=GenBank:WP_223960949.1;Name=WP_223960949.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012655.5;locus_tag=LDO45_RS07735;product=TetR/AcrR family transcriptional regulator;protein_id=WP_223960949.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 7183 8370 . + . ID=gene-LDO45_RS07740;Name=LDO45_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07740;old_locus_tag=BDI4_1570009 NZ_CAJZAS010000065.1 Protein Homology CDS 7183 8370 . + 0 ID=cds-WP_223960951.1;Parent=gene-LDO45_RS07740;Dbxref=GenBank:WP_223960951.1;Name=WP_223960951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350230.1;locus_tag=LDO45_RS07740;product=beta-propeller fold lactonase family protein;protein_id=WP_223960951.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 8420 8554 . - . ID=gene-LDO45_RS34225;Name=LDO45_RS34225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34225 NZ_CAJZAS010000065.1 Protein Homology CDS 8420 8554 . - 0 ID=cds-WP_006750603.1;Parent=gene-LDO45_RS34225;Dbxref=GenBank:WP_006750603.1;Name=WP_006750603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880630.1;locus_tag=LDO45_RS34225;product=hypothetical protein;protein_id=WP_006750603.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 8956 9372 . + . ID=gene-LDO45_RS07745;Name=LDO45_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07745;old_locus_tag=BDI4_1570011 NZ_CAJZAS010000065.1 Protein Homology CDS 8956 9372 . + 0 ID=cds-WP_223960953.1;Parent=gene-LDO45_RS07745;Dbxref=GenBank:WP_223960953.1;Name=WP_223960953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760662.1;locus_tag=LDO45_RS07745;product=hypothetical protein;protein_id=WP_223960953.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 9475 10287 . + . ID=gene-LDO45_RS07750;Name=LDO45_RS07750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07750;old_locus_tag=BDI4_1570012 NZ_CAJZAS010000065.1 Protein Homology CDS 9475 10287 . + 0 ID=cds-WP_223960955.1;Parent=gene-LDO45_RS07750;Dbxref=GenBank:WP_223960955.1;Name=WP_223960955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750605.1;locus_tag=LDO45_RS07750;product=alpha/beta fold hydrolase;protein_id=WP_223960955.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 10473 11642 . + . ID=gene-LDO45_RS07755;Name=ampC;gbkey=Gene;gene=ampC;gene_biotype=protein_coding;locus_tag=LDO45_RS07755;old_locus_tag=BDI4_1570013 NZ_CAJZAS010000065.1 Protein Homology CDS 10473 11642 . + 0 ID=cds-WP_223960957.1;Parent=gene-LDO45_RS07755;Dbxref=GenBank:WP_223960957.1;Name=WP_223960957.1;Ontology_term=GO:0008800,GO:0030288;gbkey=CDS;gene=ampC;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750606.1;locus_tag=LDO45_RS07755;product=class C beta-lactamase;protein_id=WP_223960957.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 11816 13861 . - . ID=gene-LDO45_RS07760;Name=shc;gbkey=Gene;gene=shc;gene_biotype=protein_coding;locus_tag=LDO45_RS07760;old_locus_tag=BDI4_1570014 NZ_CAJZAS010000065.1 Protein Homology CDS 11816 13861 . - 0 ID=cds-WP_223960959.1;Parent=gene-LDO45_RS07760;Dbxref=GenBank:WP_223960959.1;Name=WP_223960959.1;Ontology_term=GO:0019746,GO:0016866,GO:0051007;gbkey=CDS;gene=shc;go_function=intramolecular transferase activity|0016866||IEA,squalene-hopene cyclase activity|0051007||IEA;go_process=hopanoid biosynthetic process|0019746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750607.1;locus_tag=LDO45_RS07760;product=squalene--hopene cyclase;protein_id=WP_223960959.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 13914 14618 . + . ID=gene-LDO45_RS07765;Name=LDO45_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07765;old_locus_tag=BDI4_1570015 NZ_CAJZAS010000065.1 Protein Homology CDS 13914 14618 . + 0 ID=cds-WP_223960961.1;Parent=gene-LDO45_RS07765;Dbxref=GenBank:WP_223960961.1;Name=WP_223960961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750608.1;locus_tag=LDO45_RS07765;product=TetR/AcrR family transcriptional regulator;protein_id=WP_223960961.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 14634 14990 . - . ID=gene-LDO45_RS07770;Name=LDO45_RS07770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07770 NZ_CAJZAS010000065.1 GeneMarkS-2+ CDS 14634 14990 . - 0 ID=cds-WP_223960963.1;Parent=gene-LDO45_RS07770;Dbxref=GenBank:WP_223960963.1;Name=WP_223960963.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS07770;product=hypothetical protein;protein_id=WP_223960963.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 14982 15257 . + . ID=gene-LDO45_RS07775;Name=LDO45_RS07775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07775;old_locus_tag=BDI4_1570016 NZ_CAJZAS010000065.1 GeneMarkS-2+ CDS 14982 15257 . + 0 ID=cds-WP_374109521.1;Parent=gene-LDO45_RS07775;Dbxref=GenBank:WP_374109521.1;Name=WP_374109521.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS07775;product=hypothetical protein;protein_id=WP_374109521.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 15404 16345 . - . ID=gene-LDO45_RS07780;Name=LDO45_RS07780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07780;old_locus_tag=BDI4_1570017 NZ_CAJZAS010000065.1 Protein Homology CDS 15404 16345 . - 0 ID=cds-WP_059525958.1;Parent=gene-LDO45_RS07780;Dbxref=GenBank:WP_059525958.1;Name=WP_059525958.1;Ontology_term=GO:0009436,GO:0071704;gbkey=CDS;go_process=glyoxylate catabolic process|0009436||IEA,obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660982.1;locus_tag=LDO45_RS07780;product=dihydrodipicolinate synthase family protein;protein_id=WP_059525958.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 16938 18317 . + . ID=gene-LDO45_RS07785;Name=abaF;gbkey=Gene;gene=abaF;gene_biotype=protein_coding;locus_tag=LDO45_RS07785;old_locus_tag=BDI4_1570018 NZ_CAJZAS010000065.1 Protein Homology CDS 16938 18317 . + 0 ID=cds-WP_059525956.1;Parent=gene-LDO45_RS07785;Dbxref=GenBank:WP_059525956.1;Name=WP_059525956.1;gbkey=CDS;gene=abaF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372216.1;locus_tag=LDO45_RS07785;product=fosfomycin efflux MFS transporter AbaF;protein_id=WP_059525956.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 18607 19530 . - . ID=gene-LDO45_RS07790;Name=LDO45_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07790;old_locus_tag=BDI4_1570019 NZ_CAJZAS010000065.1 Protein Homology CDS 18607 19530 . - 0 ID=cds-WP_223960965.1;Parent=gene-LDO45_RS07790;Dbxref=GenBank:WP_223960965.1;Name=WP_223960965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014617801.1;locus_tag=LDO45_RS07790;product=recombination-associated protein RdgC;protein_id=WP_223960965.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 19801 20403 . + . ID=gene-LDO45_RS07795;Name=LDO45_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07795;old_locus_tag=BDI4_1570020 NZ_CAJZAS010000065.1 Protein Homology CDS 19801 20403 . + 0 ID=cds-WP_223960975.1;Parent=gene-LDO45_RS07795;Dbxref=GenBank:WP_223960975.1;Name=WP_223960975.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898966.1;locus_tag=LDO45_RS07795;product=J domain-containing protein;protein_id=WP_223960975.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 20712 21095 . + . ID=gene-LDO45_RS07800;Name=LDO45_RS07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07800;old_locus_tag=BDI4_1570021 NZ_CAJZAS010000065.1 Protein Homology CDS 20712 21095 . + 0 ID=cds-WP_223960967.1;Parent=gene-LDO45_RS07800;Dbxref=GenBank:WP_223960967.1;Name=WP_223960967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403790.1;locus_tag=LDO45_RS07800;product=ATP-dependent protease;protein_id=WP_223960967.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 21302 21982 . + . ID=gene-LDO45_RS07805;Name=LDO45_RS07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07805;old_locus_tag=BDI4_1570022 NZ_CAJZAS010000065.1 Protein Homology CDS 21302 21982 . + 0 ID=cds-WP_059525948.1;Parent=gene-LDO45_RS07805;Dbxref=GenBank:WP_059525948.1;Name=WP_059525948.1;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750619.1;locus_tag=LDO45_RS07805;product=GntR family transcriptional regulator;protein_id=WP_059525948.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 22067 22261 . - . ID=gene-LDO45_RS07810;Name=LDO45_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07810;old_locus_tag=BDI4_1570023 NZ_CAJZAS010000065.1 Protein Homology CDS 22067 22261 . - 0 ID=cds-WP_223960968.1;Parent=gene-LDO45_RS07810;Dbxref=GenBank:WP_223960968.1;Name=WP_223960968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399114.1;locus_tag=LDO45_RS07810;product=hypothetical protein;protein_id=WP_223960968.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 22816 23802 . + . ID=gene-LDO45_RS07815;Name=LDO45_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07815;old_locus_tag=BDI4_1570024 NZ_CAJZAS010000065.1 Protein Homology CDS 22816 23802 . + 0 ID=cds-WP_223960970.1;Parent=gene-LDO45_RS07815;Dbxref=GenBank:WP_223960970.1;Name=WP_223960970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726257.1;locus_tag=LDO45_RS07815;product=TRAP transporter substrate-binding protein;protein_id=WP_223960970.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 23799 24377 . + . ID=gene-LDO45_RS07820;Name=LDO45_RS07820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07820;old_locus_tag=BDI4_1570025 NZ_CAJZAS010000065.1 Protein Homology CDS 23799 24377 . + 0 ID=cds-WP_059525942.1;Parent=gene-LDO45_RS07820;Dbxref=GenBank:WP_059525942.1;Name=WP_059525942.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493692.1;locus_tag=LDO45_RS07820;product=TRAP transporter small permease;protein_id=WP_059525942.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 24382 25734 . + . ID=gene-LDO45_RS07825;Name=LDO45_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07825;old_locus_tag=BDI4_1570026 NZ_CAJZAS010000065.1 Protein Homology CDS 24382 25734 . + 0 ID=cds-WP_059449222.1;Parent=gene-LDO45_RS07825;Dbxref=GenBank:WP_059449222.1;Name=WP_059449222.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350121.1;locus_tag=LDO45_RS07825;product=TRAP transporter large permease;protein_id=WP_059449222.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 26074 26898 . + . ID=gene-LDO45_RS07830;Name=LDO45_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07830;old_locus_tag=BDI4_1570027 NZ_CAJZAS010000065.1 Protein Homology CDS 26074 26898 . + 0 ID=cds-WP_223960972.1;Parent=gene-LDO45_RS07830;Dbxref=GenBank:WP_223960972.1;Name=WP_223960972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350094.1;locus_tag=LDO45_RS07830;product=alpha/beta fold hydrolase;protein_id=WP_223960972.1;transl_table=11 NZ_CAJZAS010000065.1 RefSeq pseudogene 26968 27144 . - . ID=gene-LDO45_RS07835;Name=LDO45_RS07835;end_range=27144,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS07835;old_locus_tag=BDI4_1570028;partial=true;pseudo=true NZ_CAJZAS010000065.1 Protein Homology CDS 26968 27144 . - 0 ID=cds-LDO45_RS07835;Parent=gene-LDO45_RS07835;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=27144,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336998.1;locus_tag=LDO45_RS07835;partial=true;product=MFS transporter;pseudo=true;transl_table=11 NZ_CAJZAS010000065.1 RefSeq gene 27189 28256 . - . ID=gene-LDO45_RS07840;Name=LDO45_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07840;old_locus_tag=BDI4_1570029 NZ_CAJZAS010000065.1 Protein Homology CDS 27189 28256 . - 0 ID=cds-WP_223960976.1;Parent=gene-LDO45_RS07840;Dbxref=GenBank:WP_223960976.1;Name=WP_223960976.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339490.1;locus_tag=LDO45_RS07840;product=porin;protein_id=WP_223960976.1;transl_table=11 ##sequence-region NZ_CAJZAS010000066.1 1 10836 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000066.1 RefSeq region 1 10836 . + . ID=NZ_CAJZAS010000066.1:1..10836;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_158 NZ_CAJZAS010000066.1 RefSeq gene 1 367 . + . ID=gene-LDO45_RS07850;Name=LDO45_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07850;old_locus_tag=BDI4_1580002;partial=true;start_range=.,1 NZ_CAJZAS010000066.1 GeneMarkS-2+ CDS 1 367 . + 1 ID=cds-WP_223960981.1;Parent=gene-LDO45_RS07850;Dbxref=GenBank:WP_223960981.1;Name=WP_223960981.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS07850;partial=true;product=hypothetical protein;protein_id=WP_223960981.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000066.1 RefSeq gene 364 1185 . + . ID=gene-LDO45_RS07855;Name=LDO45_RS07855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07855;old_locus_tag=BDI4_1580003 NZ_CAJZAS010000066.1 Protein Homology CDS 364 1185 . + 0 ID=cds-WP_059535974.1;Parent=gene-LDO45_RS07855;Dbxref=GenBank:WP_059535974.1;Name=WP_059535974.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755480.1;locus_tag=LDO45_RS07855;product=hypothetical protein;protein_id=WP_059535974.1;transl_table=11 NZ_CAJZAS010000066.1 RefSeq gene 1182 2654 . + . ID=gene-LDO45_RS07860;Name=LDO45_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07860;old_locus_tag=BDI4_1580004 NZ_CAJZAS010000066.1 Protein Homology CDS 1182 2654 . + 0 ID=cds-WP_223960983.1;Parent=gene-LDO45_RS07860;Dbxref=GenBank:WP_223960983.1;Name=WP_223960983.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755479.1;locus_tag=LDO45_RS07860;product=S8 family serine peptidase;protein_id=WP_223960983.1;transl_table=11 NZ_CAJZAS010000066.1 RefSeq gene 2713 4506 . + . ID=gene-LDO45_RS07865;Name=LDO45_RS07865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07865;old_locus_tag=BDI4_1580005 NZ_CAJZAS010000066.1 Protein Homology CDS 2713 4506 . + 0 ID=cds-WP_223960985.1;Parent=gene-LDO45_RS07865;Dbxref=GenBank:WP_223960985.1;Name=WP_223960985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755478.1;locus_tag=LDO45_RS07865;product=hypothetical protein;protein_id=WP_223960985.1;transl_table=11 NZ_CAJZAS010000066.1 RefSeq gene 4563 5609 . + . ID=gene-LDO45_RS07870;Name=LDO45_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07870;old_locus_tag=BDI4_1580006 NZ_CAJZAS010000066.1 Protein Homology CDS 4563 5609 . + 0 ID=cds-WP_223960987.1;Parent=gene-LDO45_RS07870;Dbxref=GenBank:WP_223960987.1;Name=WP_223960987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761789.1;locus_tag=LDO45_RS07870;product=hypothetical protein;protein_id=WP_223960987.1;transl_table=11 NZ_CAJZAS010000066.1 RefSeq gene 5643 7034 . + . ID=gene-LDO45_RS07875;Name=LDO45_RS07875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07875;old_locus_tag=BDI4_1580007 NZ_CAJZAS010000066.1 Protein Homology CDS 5643 7034 . + 0 ID=cds-WP_223960989.1;Parent=gene-LDO45_RS07875;Dbxref=GenBank:WP_223960989.1;Name=WP_223960989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761788.1;locus_tag=LDO45_RS07875;product=hypothetical protein;protein_id=WP_223960989.1;transl_table=11 NZ_CAJZAS010000066.1 RefSeq gene 7038 8345 . + . ID=gene-LDO45_RS07880;Name=LDO45_RS07880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07880;old_locus_tag=BDI4_1580008 NZ_CAJZAS010000066.1 GeneMarkS-2+ CDS 7038 8345 . + 0 ID=cds-WP_175910354.1;Parent=gene-LDO45_RS07880;Dbxref=GenBank:WP_175910354.1;Name=WP_175910354.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS07880;product=hypothetical protein;protein_id=WP_175910354.1;transl_table=11 NZ_CAJZAS010000066.1 RefSeq gene 8349 9344 . + . ID=gene-LDO45_RS07885;Name=LDO45_RS07885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07885;old_locus_tag=BDI4_1580009 NZ_CAJZAS010000066.1 Protein Homology CDS 8349 9344 . + 0 ID=cds-WP_223960991.1;Parent=gene-LDO45_RS07885;Dbxref=GenBank:WP_223960991.1;Name=WP_223960991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755739.1;locus_tag=LDO45_RS07885;product=hypothetical protein;protein_id=WP_223960991.1;transl_table=11 ##sequence-region NZ_CAJZAS010000067.1 1 5923 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000067.1 RefSeq region 1 5923 . + . ID=NZ_CAJZAS010000067.1:1..5923;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_159 NZ_CAJZAS010000067.1 RefSeq gene 1 356 . - . ID=gene-LDO45_RS07890;Name=LDO45_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07890;partial=true;start_range=.,1 NZ_CAJZAS010000067.1 Protein Homology CDS 1 356 . - 0 ID=cds-WP_374109522.1;Parent=gene-LDO45_RS07890;Dbxref=GenBank:WP_374109522.1;Name=WP_374109522.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522939.1;locus_tag=LDO45_RS07890;partial=true;product=ABC-type transport auxiliary lipoprotein family protein;protein_id=WP_374109522.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000067.1 RefSeq gene 404 1336 . - . ID=gene-LDO45_RS07895;Name=LDO45_RS07895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07895;old_locus_tag=BDI4_1590002 NZ_CAJZAS010000067.1 Protein Homology CDS 404 1336 . - 0 ID=cds-WP_059524000.1;Parent=gene-LDO45_RS07895;Dbxref=GenBank:WP_059524000.1;Name=WP_059524000.1;Ontology_term=GO:0015914;gbkey=CDS;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763282.1;locus_tag=LDO45_RS07895;product=MlaD family protein;protein_id=WP_059524000.1;transl_table=11 NZ_CAJZAS010000067.1 RefSeq gene 1364 2305 . - . ID=gene-LDO45_RS07900;Name=LDO45_RS07900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07900;old_locus_tag=BDI4_1590003 NZ_CAJZAS010000067.1 Protein Homology CDS 1364 2305 . - 0 ID=cds-WP_059523998.1;Parent=gene-LDO45_RS07900;Dbxref=GenBank:WP_059523998.1;Name=WP_059523998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398139.1;locus_tag=LDO45_RS07900;product=ABC transporter ATP-binding protein;protein_id=WP_059523998.1;transl_table=11 NZ_CAJZAS010000067.1 RefSeq gene 2302 3426 . - . ID=gene-LDO45_RS07905;Name=LDO45_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07905;old_locus_tag=BDI4_1590004 NZ_CAJZAS010000067.1 Protein Homology CDS 2302 3426 . - 0 ID=cds-WP_059691416.1;Parent=gene-LDO45_RS07905;Dbxref=GenBank:WP_059691416.1;Name=WP_059691416.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329299.1;locus_tag=LDO45_RS07905;product=ABC transporter permease;protein_id=WP_059691416.1;transl_table=11 NZ_CAJZAS010000067.1 RefSeq gene 3746 5809 . + . ID=gene-LDO45_RS07910;Name=LDO45_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07910;old_locus_tag=BDI4_1590005 NZ_CAJZAS010000067.1 Protein Homology CDS 3746 5809 . + 0 ID=cds-WP_223960995.1;Parent=gene-LDO45_RS07910;Dbxref=GenBank:WP_223960995.1;Name=WP_223960995.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329300.1;locus_tag=LDO45_RS07910;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_223960995.1;transl_table=11 ##sequence-region NZ_CAJZAS010000068.1 1 106331 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000068.1 RefSeq region 1 106331 . + . ID=NZ_CAJZAS010000068.1:1..106331;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_16 NZ_CAJZAS010000068.1 RefSeq gene 216 1433 . + . ID=gene-LDO45_RS07915;Name=LDO45_RS07915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07915;old_locus_tag=BDI4_160001 NZ_CAJZAS010000068.1 Protein Homology CDS 216 1433 . + 0 ID=cds-WP_059689367.1;Parent=gene-LDO45_RS07915;Dbxref=GenBank:WP_059689367.1;Name=WP_059689367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331593.1;locus_tag=LDO45_RS07915;product=DUF2863 family protein;protein_id=WP_059689367.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 1643 2479 . + . ID=gene-LDO45_RS07920;Name=LDO45_RS07920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07920;old_locus_tag=BDI4_160002 NZ_CAJZAS010000068.1 Protein Homology CDS 1643 2479 . + 0 ID=cds-WP_059689368.1;Parent=gene-LDO45_RS07920;Dbxref=GenBank:WP_059689368.1;Name=WP_059689368.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657462.1;locus_tag=LDO45_RS07920;product=response regulator transcription factor;protein_id=WP_059689368.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 2555 3229 . + . ID=gene-LDO45_RS07925;Name=LDO45_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07925;old_locus_tag=BDI4_160003 NZ_CAJZAS010000068.1 Protein Homology CDS 2555 3229 . + 0 ID=cds-WP_059533167.1;Parent=gene-LDO45_RS07925;Dbxref=GenBank:WP_059533167.1;Name=WP_059533167.1;Ontology_term=GO:0000041,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transition metal ion transport|0000041||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600792.1;locus_tag=LDO45_RS07925;product=energy-coupling factor ABC transporter permease;protein_id=WP_059533167.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 3366 4019 . + . ID=gene-LDO45_RS07930;Name=LDO45_RS07930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07930;old_locus_tag=BDI4_160004 NZ_CAJZAS010000068.1 Protein Homology CDS 3366 4019 . + 0 ID=cds-WP_059533169.1;Parent=gene-LDO45_RS07930;Dbxref=GenBank:WP_059533169.1;Name=WP_059533169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492731.1;locus_tag=LDO45_RS07930;product=BspC domain-containing protein;protein_id=WP_059533169.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 4102 5256 . - . ID=gene-LDO45_RS07935;Name=LDO45_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07935;old_locus_tag=BDI4_160005 NZ_CAJZAS010000068.1 Protein Homology CDS 4102 5256 . - 0 ID=cds-WP_059703378.1;Parent=gene-LDO45_RS07935;Dbxref=GenBank:WP_059703378.1;Name=WP_059703378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213020.1;locus_tag=LDO45_RS07935;product=M14-type cytosolic carboxypeptidase;protein_id=WP_059703378.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 5345 6127 . - . ID=gene-LDO45_RS07940;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=LDO45_RS07940;old_locus_tag=BDI4_160006 NZ_CAJZAS010000068.1 Protein Homology CDS 5345 6127 . - 0 ID=cds-WP_059689371.1;Parent=gene-LDO45_RS07940;Dbxref=GenBank:WP_059689371.1;Name=WP_059689371.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331598.1;locus_tag=LDO45_RS07940;product=peroxide stress protein YaaA;protein_id=WP_059689371.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 6185 6682 . + . ID=gene-LDO45_RS07945;Name=LDO45_RS07945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07945;old_locus_tag=BDI4_160007 NZ_CAJZAS010000068.1 Protein Homology CDS 6185 6682 . + 0 ID=cds-WP_059533175.1;Parent=gene-LDO45_RS07945;Dbxref=GenBank:WP_059533175.1;Name=WP_059533175.1;Ontology_term=GO:0004521,GO:0005515;gbkey=CDS;go_function=RNA endonuclease activity|0004521||IEA,protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415580.1;locus_tag=LDO45_RS07945;product=putative toxin-antitoxin system toxin component%2C PIN family;protein_id=WP_059533175.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 6716 7888 . + . ID=gene-LDO45_RS07950;Name=LDO45_RS07950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07950;old_locus_tag=BDI4_160008 NZ_CAJZAS010000068.1 Protein Homology CDS 6716 7888 . + 0 ID=cds-WP_223960997.1;Parent=gene-LDO45_RS07950;Dbxref=GenBank:WP_223960997.1;Name=WP_223960997.1;Ontology_term=GO:0008483,GO:0016740;gbkey=CDS;go_function=transaminase activity|0008483||IEA,transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025129.1;locus_tag=LDO45_RS07950;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_223960997.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 7938 8594 . - . ID=gene-LDO45_RS07955;Name=LDO45_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07955;old_locus_tag=BDI4_160009 NZ_CAJZAS010000068.1 Protein Homology CDS 7938 8594 . - 0 ID=cds-WP_059533180.1;Parent=gene-LDO45_RS07955;Dbxref=GenBank:WP_059533180.1;Name=WP_059533180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398820.1;locus_tag=LDO45_RS07955;product=glutathione S-transferase;protein_id=WP_059533180.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 8805 9596 . + . ID=gene-LDO45_RS07960;Name=LDO45_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07960;old_locus_tag=BDI4_160010 NZ_CAJZAS010000068.1 Protein Homology CDS 8805 9596 . + 0 ID=cds-WP_223961000.1;Parent=gene-LDO45_RS07960;Dbxref=GenBank:WP_223961000.1;Name=WP_223961000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196422.1;locus_tag=LDO45_RS07960;product=oxepin-CoA hydrolase%2C alternative type;protein_id=WP_223961000.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 9747 10439 . + . ID=gene-LDO45_RS07965;Name=LDO45_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07965;old_locus_tag=BDI4_160011 NZ_CAJZAS010000068.1 Protein Homology CDS 9747 10439 . + 0 ID=cds-WP_223961001.1;Parent=gene-LDO45_RS07965;Dbxref=GenBank:WP_223961001.1;Name=WP_223961001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723350.1;locus_tag=LDO45_RS07965;product=glutathione binding-like protein;protein_id=WP_223961001.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 10491 10967 . - . ID=gene-LDO45_RS07970;Name=LDO45_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07970;old_locus_tag=BDI4_160012 NZ_CAJZAS010000068.1 Protein Homology CDS 10491 10967 . - 0 ID=cds-WP_059820668.1;Parent=gene-LDO45_RS07970;Dbxref=GenBank:WP_059820668.1;Name=WP_059820668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398817.1;locus_tag=LDO45_RS07970;product=MaoC family dehydratase;protein_id=WP_059820668.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 10964 11425 . - . ID=gene-LDO45_RS07975;Name=LDO45_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07975;old_locus_tag=BDI4_160013 NZ_CAJZAS010000068.1 Protein Homology CDS 10964 11425 . - 0 ID=cds-WP_059533186.1;Parent=gene-LDO45_RS07975;Dbxref=GenBank:WP_059533186.1;Name=WP_059533186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364310.1;locus_tag=LDO45_RS07975;product=MaoC family dehydratase;protein_id=WP_059533186.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 11460 12593 . - . ID=gene-LDO45_RS07980;Name=LDO45_RS07980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07980;old_locus_tag=BDI4_160014 NZ_CAJZAS010000068.1 Protein Homology CDS 11460 12593 . - 0 ID=cds-WP_223961002.1;Parent=gene-LDO45_RS07980;Dbxref=GenBank:WP_223961002.1;Name=WP_223961002.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723352.1;locus_tag=LDO45_RS07980;product=acyl-CoA dehydrogenase family protein;protein_id=WP_223961002.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 12613 13809 . - . ID=gene-LDO45_RS07985;Name=LDO45_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07985;old_locus_tag=BDI4_160015 NZ_CAJZAS010000068.1 Protein Homology CDS 12613 13809 . - 0 ID=cds-WP_044844732.1;Parent=gene-LDO45_RS07985;Dbxref=GenBank:WP_044844732.1;Name=WP_044844732.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763850.1;locus_tag=LDO45_RS07985;product=acyl-CoA dehydrogenase family protein;protein_id=WP_044844732.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 13864 14286 . - . ID=gene-LDO45_RS07990;Name=LDO45_RS07990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07990;old_locus_tag=BDI4_160016 NZ_CAJZAS010000068.1 Protein Homology CDS 13864 14286 . - 0 ID=cds-WP_006750470.1;Parent=gene-LDO45_RS07990;Dbxref=GenBank:WP_006750470.1;Name=WP_006750470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185972.1;locus_tag=LDO45_RS07990;product=DUF1178 family protein;protein_id=WP_006750470.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 14423 15013 . - . ID=gene-LDO45_RS07995;Name=LDO45_RS07995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS07995;old_locus_tag=BDI4_160017 NZ_CAJZAS010000068.1 Protein Homology CDS 14423 15013 . - 0 ID=cds-WP_223961004.1;Parent=gene-LDO45_RS07995;Dbxref=GenBank:WP_223961004.1;Name=WP_223961004.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908710.1;locus_tag=LDO45_RS07995;product=NUDIX domain-containing protein;protein_id=WP_223961004.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 15055 15351 . - . ID=gene-LDO45_RS08000;Name=LDO45_RS08000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08000;old_locus_tag=BDI4_160018 NZ_CAJZAS010000068.1 Protein Homology CDS 15055 15351 . - 0 ID=cds-WP_059533192.1;Parent=gene-LDO45_RS08000;Dbxref=GenBank:WP_059533192.1;Name=WP_059533192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601582.1;locus_tag=LDO45_RS08000;product=DUF2818 family protein;protein_id=WP_059533192.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 15351 16805 . - . ID=gene-LDO45_RS08005;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=LDO45_RS08005;old_locus_tag=BDI4_160019 NZ_CAJZAS010000068.1 Protein Homology CDS 15351 16805 . - 0 ID=cds-WP_175910931.1;Parent=gene-LDO45_RS08005;Dbxref=GenBank:WP_175910931.1;Name=WP_175910931.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186468.1;locus_tag=LDO45_RS08005;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_175910931.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 16842 18332 . - . ID=gene-LDO45_RS08010;Name=LDO45_RS08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08010;old_locus_tag=BDI4_160020 NZ_CAJZAS010000068.1 Protein Homology CDS 16842 18332 . - 0 ID=cds-WP_223961006.1;Parent=gene-LDO45_RS08010;Dbxref=GenBank:WP_223961006.1;Name=WP_223961006.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025113.1;locus_tag=LDO45_RS08010;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_223961006.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 18351 20405 . - . ID=gene-LDO45_RS08015;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=LDO45_RS08015;old_locus_tag=BDI4_160021 NZ_CAJZAS010000068.1 Protein Homology CDS 18351 20405 . - 0 ID=cds-WP_059533198.1;Parent=gene-LDO45_RS08015;Dbxref=GenBank:WP_059533198.1;Name=WP_059533198.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185765.1;locus_tag=LDO45_RS08015;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_059533198.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 20423 20728 . - . ID=gene-LDO45_RS08020;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=LDO45_RS08020;old_locus_tag=BDI4_160022 NZ_CAJZAS010000068.1 Protein Homology CDS 20423 20728 . - 0 ID=cds-WP_004185739.1;Parent=gene-LDO45_RS08020;Dbxref=GenBank:WP_004185739.1;Name=WP_004185739.1;gbkey=CDS;gene=nuoK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007588140.1;locus_tag=LDO45_RS08020;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_004185739.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 20747 21397 . - . ID=gene-LDO45_RS08025;Name=LDO45_RS08025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08025;old_locus_tag=BDI4_160023 NZ_CAJZAS010000068.1 Protein Homology CDS 20747 21397 . - 0 ID=cds-WP_059533200.1;Parent=gene-LDO45_RS08025;Dbxref=GenBank:WP_059533200.1;Name=WP_059533200.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885528.1;locus_tag=LDO45_RS08025;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_059533200.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 21512 22000 . - . ID=gene-LDO45_RS08030;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=LDO45_RS08030;old_locus_tag=BDI4_160024 NZ_CAJZAS010000068.1 Protein Homology CDS 21512 22000 . - 0 ID=cds-WP_011885529.1;Parent=gene-LDO45_RS08030;Dbxref=GenBank:WP_011885529.1;Name=WP_011885529.1;Ontology_term=GO:0016651,GO:0051539;gbkey=CDS;gene=nuoI;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885529.1;locus_tag=LDO45_RS08030;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_011885529.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 22016 23083 . - . ID=gene-LDO45_RS08035;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=LDO45_RS08035;old_locus_tag=BDI4_160025 NZ_CAJZAS010000068.1 Protein Homology CDS 22016 23083 . - 0 ID=cds-WP_059533202.1;Parent=gene-LDO45_RS08035;Dbxref=GenBank:WP_059533202.1;Name=WP_059533202.1;Ontology_term=GO:0016020;gbkey=CDS;gene=nuoH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896507.1;locus_tag=LDO45_RS08035;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_059533202.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 23084 25414 . - . ID=gene-LDO45_RS08040;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=LDO45_RS08040;old_locus_tag=BDI4_160026 NZ_CAJZAS010000068.1 Protein Homology CDS 23084 25414 . - 0 ID=cds-WP_059533204.1;Parent=gene-LDO45_RS08040;Dbxref=GenBank:WP_059533204.1;Name=WP_059533204.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213012.1;locus_tag=LDO45_RS08040;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_059533204.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 25499 26809 . - . ID=gene-LDO45_RS08045;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=LDO45_RS08045;old_locus_tag=BDI4_160027 NZ_CAJZAS010000068.1 Protein Homology CDS 25499 26809 . - 0 ID=cds-WP_006756904.1;Parent=gene-LDO45_RS08045;Dbxref=GenBank:WP_006756904.1;Name=WP_006756904.1;Ontology_term=GO:0010181,GO:0050136,GO:0051287,GO:0051539;gbkey=CDS;gene=nuoF;go_function=FMN binding|0010181||IEA,NADH:ubiquinone reductase (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896505.1;locus_tag=LDO45_RS08045;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_006756904.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 26806 27291 . - . ID=gene-LDO45_RS08050;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=LDO45_RS08050;old_locus_tag=BDI4_160028 NZ_CAJZAS010000068.1 Protein Homology CDS 26806 27291 . - 0 ID=cds-WP_006478266.1;Parent=gene-LDO45_RS08050;Dbxref=GenBank:WP_006478266.1;Name=WP_006478266.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401393.1;locus_tag=LDO45_RS08050;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_006478266.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 27460 28713 . - . ID=gene-LDO45_RS08055;Name=LDO45_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08055;old_locus_tag=BDI4_160029 NZ_CAJZAS010000068.1 Protein Homology CDS 27460 28713 . - 0 ID=cds-WP_012364320.1;Parent=gene-LDO45_RS08055;Dbxref=GenBank:WP_012364320.1;Name=WP_012364320.1;Ontology_term=GO:0016651,GO:0048038,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,quinone binding|0048038||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014191758.1;locus_tag=LDO45_RS08055;product=NADH-quinone oxidoreductase subunit D;protein_id=WP_012364320.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 28723 29325 . - . ID=gene-LDO45_RS08060;Name=LDO45_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08060;old_locus_tag=BDI4_160030 NZ_CAJZAS010000068.1 Protein Homology CDS 28723 29325 . - 0 ID=cds-WP_059689381.1;Parent=gene-LDO45_RS08060;Dbxref=GenBank:WP_059689381.1;Name=WP_059689381.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018442918.1;locus_tag=LDO45_RS08060;product=NADH-quinone oxidoreductase subunit C;protein_id=WP_059689381.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 29347 29826 . - . ID=gene-LDO45_RS08065;Name=LDO45_RS08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08065;old_locus_tag=BDI4_160031 NZ_CAJZAS010000068.1 Protein Homology CDS 29347 29826 . - 0 ID=cds-WP_006398799.1;Parent=gene-LDO45_RS08065;Dbxref=GenBank:WP_006398799.1;Name=WP_006398799.1;Ontology_term=GO:0008137,GO:0048038,GO:0051539,GO:0045271;gbkey=CDS;go_component=respiratory chain complex I|0045271||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,quinone binding|0048038||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186402.1;locus_tag=LDO45_RS08065;product=NADH-quinone oxidoreductase subunit B family protein;protein_id=WP_006398799.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 29889 30248 . - . ID=gene-LDO45_RS08070;Name=LDO45_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08070;old_locus_tag=BDI4_160032 NZ_CAJZAS010000068.1 Protein Homology CDS 29889 30248 . - 0 ID=cds-WP_006398798.1;Parent=gene-LDO45_RS08070;Dbxref=GenBank:WP_006398798.1;Name=WP_006398798.1;Ontology_term=GO:0016655,GO:0048038,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013339872.1;locus_tag=LDO45_RS08070;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_006398798.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 30403 30487 . - . ID=gene-LDO45_RS08075;Name=LDO45_RS08075;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS08075;old_locus_tag=BDI4_TRNA50 NZ_CAJZAS010000068.1 tRNAscan-SE tRNA 30403 30487 . - . ID=rna-LDO45_RS08075;Parent=gene-LDO45_RS08075;anticodon=(pos:complement(30451..30453));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS08075;product=tRNA-Leu NZ_CAJZAS010000068.1 tRNAscan-SE exon 30403 30487 . - . ID=exon-LDO45_RS08075-1;Parent=rna-LDO45_RS08075;anticodon=(pos:complement(30451..30453));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS08075;product=tRNA-Leu NZ_CAJZAS010000068.1 RefSeq gene 30599 30976 . - . ID=gene-LDO45_RS08080;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=LDO45_RS08080;old_locus_tag=BDI4_160033 NZ_CAJZAS010000068.1 Protein Homology CDS 30599 30976 . - 0 ID=cds-WP_059533209.1;Parent=gene-LDO45_RS08080;Dbxref=GenBank:WP_059533209.1;Name=WP_059533209.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545815.1;locus_tag=LDO45_RS08080;product=preprotein translocase subunit SecG;protein_id=WP_059533209.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 31049 31804 . - . ID=gene-LDO45_RS08085;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=LDO45_RS08085;old_locus_tag=BDI4_160034 NZ_CAJZAS010000068.1 Protein Homology CDS 31049 31804 . - 0 ID=cds-WP_223961008.1;Parent=gene-LDO45_RS08085;Dbxref=GenBank:WP_223961008.1;Name=WP_223961008.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657484.1;locus_tag=LDO45_RS08085;product=triose-phosphate isomerase;protein_id=WP_223961008.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 31946 32965 . - . ID=gene-LDO45_RS08090;Name=LDO45_RS08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08090;old_locus_tag=BDI4_160035 NZ_CAJZAS010000068.1 Protein Homology CDS 31946 32965 . - 0 ID=cds-WP_223961010.1;Parent=gene-LDO45_RS08090;Dbxref=GenBank:WP_223961010.1;Name=WP_223961010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600129.1;locus_tag=LDO45_RS08090;product=NAD(P)H-quinone oxidoreductase;protein_id=WP_223961010.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 33106 35253 . - . ID=gene-LDO45_RS08095;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=LDO45_RS08095;old_locus_tag=BDI4_160036 NZ_CAJZAS010000068.1 Protein Homology CDS 33106 35253 . - 0 ID=cds-WP_059533215.1;Parent=gene-LDO45_RS08095;Dbxref=GenBank:WP_059533215.1;Name=WP_059533215.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410113.1;locus_tag=LDO45_RS08095;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_059533215.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 35544 35813 . - . ID=gene-LDO45_RS08100;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=LDO45_RS08100;old_locus_tag=BDI4_160037 NZ_CAJZAS010000068.1 Protein Homology CDS 35544 35813 . - 0 ID=cds-WP_006398792.1;Parent=gene-LDO45_RS08100;Dbxref=GenBank:WP_006398792.1;Name=WP_006398792.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401401.1;locus_tag=LDO45_RS08100;product=30S ribosomal protein S15;protein_id=WP_006398792.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 35933 37192 . - . ID=gene-LDO45_RS08105;Name=LDO45_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08105;old_locus_tag=BDI4_160038 NZ_CAJZAS010000068.1 Protein Homology CDS 35933 37192 . - 0 ID=cds-WP_223961012.1;Parent=gene-LDO45_RS08105;Dbxref=GenBank:WP_223961012.1;Name=WP_223961012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478259.1;locus_tag=LDO45_RS08105;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_223961012.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 37383 37895 . + . ID=gene-LDO45_RS08110;Name=LDO45_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08110;old_locus_tag=BDI4_160039 NZ_CAJZAS010000068.1 Protein Homology CDS 37383 37895 . + 0 ID=cds-WP_059533217.1;Parent=gene-LDO45_RS08110;Dbxref=GenBank:WP_059533217.1;Name=WP_059533217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405570.1;locus_tag=LDO45_RS08110;product=hypothetical protein;protein_id=WP_059533217.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 38281 38922 . + . ID=gene-LDO45_RS08115;Name=LDO45_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08115;old_locus_tag=BDI4_160040 NZ_CAJZAS010000068.1 Protein Homology CDS 38281 38922 . + 0 ID=cds-WP_223961014.1;Parent=gene-LDO45_RS08115;Dbxref=GenBank:WP_223961014.1;Name=WP_223961014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415554.1;locus_tag=LDO45_RS08115;product=carbonic anhydrase;protein_id=WP_223961014.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 38959 40509 . + . ID=gene-LDO45_RS08120;Name=LDO45_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08120;old_locus_tag=BDI4_160041 NZ_CAJZAS010000068.1 Protein Homology CDS 38959 40509 . + 0 ID=cds-WP_059533222.1;Parent=gene-LDO45_RS08120;Dbxref=GenBank:WP_059533222.1;Name=WP_059533222.1;Ontology_term=GO:0015103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=inorganic anion transmembrane transporter activity|0015103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723364.1;locus_tag=LDO45_RS08120;product=SulP family inorganic anion transporter;protein_id=WP_059533222.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 40590 42134 . - . ID=gene-LDO45_RS08125;Name=LDO45_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08125;old_locus_tag=BDI4_160042 NZ_CAJZAS010000068.1 Protein Homology CDS 40590 42134 . - 0 ID=cds-WP_059533224.1;Parent=gene-LDO45_RS08125;Dbxref=GenBank:WP_059533224.1;Name=WP_059533224.1;Ontology_term=GO:0003852;gbkey=CDS;go_function=2-isopropylmalate synthase activity|0003852||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398785.1;locus_tag=LDO45_RS08125;product=2-isopropylmalate synthase;protein_id=WP_059533224.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 42458 43330 . - . ID=gene-LDO45_RS08130;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=LDO45_RS08130;old_locus_tag=BDI4_160044 NZ_CAJZAS010000068.1 Protein Homology CDS 42458 43330 . - 0 ID=cds-WP_059533226.1;Parent=gene-LDO45_RS08130;Dbxref=GenBank:WP_059533226.1;Name=WP_059533226.1;Ontology_term=GO:0008654,GO:0003882;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-serine O-phosphatidyltransferase activity|0003882||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186682.1;locus_tag=LDO45_RS08130;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_059533226.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 43346 43990 . - . ID=gene-LDO45_RS08135;Name=LDO45_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08135;old_locus_tag=BDI4_160045 NZ_CAJZAS010000068.1 Protein Homology CDS 43346 43990 . - 0 ID=cds-WP_059468119.1;Parent=gene-LDO45_RS08135;Dbxref=GenBank:WP_059468119.1;Name=WP_059468119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331633.1;locus_tag=LDO45_RS08135;product=phosphatidylserine decarboxylase;protein_id=WP_059468119.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 44118 45134 . - . ID=gene-LDO45_RS08140;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=LDO45_RS08140;old_locus_tag=BDI4_160046 NZ_CAJZAS010000068.1 Protein Homology CDS 44118 45134 . - 0 ID=cds-WP_059533228.1;Parent=gene-LDO45_RS08140;Dbxref=GenBank:WP_059533228.1;Name=WP_059533228.1;gbkey=CDS;gene=ilvC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011902902.1;locus_tag=LDO45_RS08140;product=ketol-acid reductoisomerase;protein_id=WP_059533228.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 45230 45721 . - . ID=gene-LDO45_RS08145;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=LDO45_RS08145;old_locus_tag=BDI4_160047 NZ_CAJZAS010000068.1 Protein Homology CDS 45230 45721 . - 0 ID=cds-WP_034207977.1;Parent=gene-LDO45_RS08145;Dbxref=GenBank:WP_034207977.1;Name=WP_034207977.1;Ontology_term=GO:0009082,GO:1990610;gbkey=CDS;gene=ilvN;go_function=acetolactate synthase regulator activity|1990610||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004630835.1;locus_tag=LDO45_RS08145;product=acetolactate synthase small subunit;protein_id=WP_034207977.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 45833 47596 . - . ID=gene-LDO45_RS08150;Name=LDO45_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08150;old_locus_tag=BDI4_160048 NZ_CAJZAS010000068.1 Protein Homology CDS 45833 47596 . - 0 ID=cds-WP_059689386.1;Parent=gene-LDO45_RS08150;Dbxref=GenBank:WP_059689386.1;Name=WP_059689386.1;Ontology_term=GO:0009082,GO:0003984;gbkey=CDS;go_function=acetolactate synthase activity|0003984||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185769.1;locus_tag=LDO45_RS08150;product=acetolactate synthase 3 catalytic subunit;protein_id=WP_059689386.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 47949 48512 . + . ID=gene-LDO45_RS08155;Name=LDO45_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08155;old_locus_tag=BDI4_160049 NZ_CAJZAS010000068.1 Protein Homology CDS 47949 48512 . + 0 ID=cds-WP_059468121.1;Parent=gene-LDO45_RS08155;Dbxref=GenBank:WP_059468121.1;Name=WP_059468121.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011487480.1;locus_tag=LDO45_RS08155;product=RNA polymerase sigma factor;protein_id=WP_059468121.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 48509 48861 . + . ID=gene-LDO45_RS08160;Name=LDO45_RS08160;end_range=48861,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08160;old_locus_tag=BDI4_160050;partial=true NZ_CAJZAS010000068.1 Protein Homology CDS 48509 48861 . + 0 ID=cds-WP_223961051.1;Parent=gene-LDO45_RS08160;Dbxref=GenBank:WP_223961051.1;Name=WP_223961051.1;end_range=48861,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185907.1;locus_tag=LDO45_RS08160;partial=true;product=DUF3619 family protein;protein_id=WP_223961051.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 48872 49515 . + . ID=gene-LDO45_RS08165;Name=LDO45_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08165;partial=true;start_range=.,48872 NZ_CAJZAS010000068.1 Protein Homology CDS 48872 49515 . + 2 ID=cds-WP_223961053.1;Parent=gene-LDO45_RS08165;Dbxref=GenBank:WP_223961053.1;Name=WP_223961053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328911.1;locus_tag=LDO45_RS08165;partial=true;product=DUF3106 domain-containing protein;protein_id=WP_223961053.1;start_range=.,48872;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 49594 50034 . + . ID=gene-LDO45_RS08170;Name=LDO45_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08170;old_locus_tag=BDI4_160052 NZ_CAJZAS010000068.1 Protein Homology CDS 49594 50034 . + 0 ID=cds-WP_373559454.1;Parent=gene-LDO45_RS08170;Dbxref=GenBank:WP_373559454.1;Name=WP_373559454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763820.1;locus_tag=LDO45_RS08170;product=RDD family protein;protein_id=WP_373559454.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 50305 51243 . + . ID=gene-LDO45_RS08175;Name=LDO45_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08175;old_locus_tag=BDI4_160053 NZ_CAJZAS010000068.1 Protein Homology CDS 50305 51243 . + 0 ID=cds-WP_223961018.1;Parent=gene-LDO45_RS08175;Dbxref=GenBank:WP_223961018.1;Name=WP_223961018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196438.1;locus_tag=LDO45_RS08175;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_223961018.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 51274 52308 . + . ID=gene-LDO45_RS08180;Name=LDO45_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08180;old_locus_tag=BDI4_160055 NZ_CAJZAS010000068.1 Protein Homology CDS 51274 52308 . + 0 ID=cds-WP_059533238.1;Parent=gene-LDO45_RS08180;Dbxref=GenBank:WP_059533238.1;Name=WP_059533238.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328913.1;locus_tag=LDO45_RS08180;product=glycosyltransferase family 1 protein;protein_id=WP_059533238.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 52305 52841 . + . ID=gene-LDO45_RS08185;Name=LDO45_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08185;old_locus_tag=BDI4_160054 NZ_CAJZAS010000068.1 Protein Homology CDS 52305 52841 . + 0 ID=cds-WP_059533240.1;Parent=gene-LDO45_RS08185;Dbxref=GenBank:WP_059533240.1;Name=WP_059533240.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872;gbkey=CDS;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411034.1;locus_tag=LDO45_RS08185;product=diacylglycerol kinase;protein_id=WP_059533240.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 53034 53789 . + . ID=gene-LDO45_RS08190;Name=LDO45_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08190;old_locus_tag=BDI4_160057 NZ_CAJZAS010000068.1 Protein Homology CDS 53034 53789 . + 0 ID=cds-WP_059533242.1;Parent=gene-LDO45_RS08190;Dbxref=GenBank:WP_059533242.1;Name=WP_059533242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212998.1;locus_tag=LDO45_RS08190;product=TetR/AcrR family transcriptional regulator;protein_id=WP_059533242.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 53786 54367 . + . ID=gene-LDO45_RS08195;Name=LDO45_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08195;old_locus_tag=BDI4_160056 NZ_CAJZAS010000068.1 Protein Homology CDS 53786 54367 . + 0 ID=cds-WP_059533245.1;Parent=gene-LDO45_RS08195;Dbxref=GenBank:WP_059533245.1;Name=WP_059533245.1;Ontology_term=GO:0009691,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885556.1;locus_tag=LDO45_RS08195;product=TIGR00730 family Rossman fold protein;protein_id=WP_059533245.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 54390 55154 . + . ID=gene-LDO45_RS08200;Name=LDO45_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08200;old_locus_tag=BDI4_160058 NZ_CAJZAS010000068.1 Protein Homology CDS 54390 55154 . + 0 ID=cds-WP_059533247.1;Parent=gene-LDO45_RS08200;Dbxref=GenBank:WP_059533247.1;Name=WP_059533247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545827.1;locus_tag=LDO45_RS08200;product=SDR family oxidoreductase;protein_id=WP_059533247.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 55384 57279 . + . ID=gene-LDO45_RS08205;Name=LDO45_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08205;old_locus_tag=BDI4_160059 NZ_CAJZAS010000068.1 Protein Homology CDS 55384 57279 . + 0 ID=cds-WP_223961020.1;Parent=gene-LDO45_RS08205;Dbxref=GenBank:WP_223961020.1;Name=WP_223961020.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723372.1;locus_tag=LDO45_RS08205;product=glycosyltransferase family 39 protein;protein_id=WP_223961020.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 57381 57998 . - . ID=gene-LDO45_RS08210;Name=LDO45_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08210;old_locus_tag=BDI4_160060 NZ_CAJZAS010000068.1 Protein Homology CDS 57381 57998 . - 0 ID=cds-WP_223961022.1;Parent=gene-LDO45_RS08210;Dbxref=GenBank:WP_223961022.1;Name=WP_223961022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601103.1;locus_tag=LDO45_RS08210;product=DUF924 family protein;protein_id=WP_223961022.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 57995 58726 . - . ID=gene-LDO45_RS08215;Name=LDO45_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08215;old_locus_tag=BDI4_160061 NZ_CAJZAS010000068.1 Protein Homology CDS 57995 58726 . - 0 ID=cds-WP_059533251.1;Parent=gene-LDO45_RS08215;Dbxref=GenBank:WP_059533251.1;Name=WP_059533251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398766.1;locus_tag=LDO45_RS08215;product=alanyl-tRNA editing protein;protein_id=WP_059533251.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 58828 59238 . - . ID=gene-LDO45_RS08220;Name=LDO45_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08220;old_locus_tag=BDI4_160062 NZ_CAJZAS010000068.1 Protein Homology CDS 58828 59238 . - 0 ID=cds-WP_059533253.1;Parent=gene-LDO45_RS08220;Dbxref=GenBank:WP_059533253.1;Name=WP_059533253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331548.1;locus_tag=LDO45_RS08220;product=group II truncated hemoglobin;protein_id=WP_059533253.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 59281 61785 . - . ID=gene-LDO45_RS08225;Name=LDO45_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08225;old_locus_tag=BDI4_160063 NZ_CAJZAS010000068.1 Protein Homology CDS 59281 61785 . - 0 ID=cds-WP_223961055.1;Parent=gene-LDO45_RS08225;Dbxref=GenBank:WP_223961055.1;Name=WP_223961055.1;Ontology_term=GO:0006810,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754236.1;locus_tag=LDO45_RS08225;product=ABC transporter permease;protein_id=WP_223961055.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 61893 62510 . - . ID=gene-LDO45_RS08230;Name=LDO45_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08230;old_locus_tag=BDI4_160064 NZ_CAJZAS010000068.1 Protein Homology CDS 61893 62510 . - 0 ID=cds-WP_040144699.1;Parent=gene-LDO45_RS08230;Dbxref=GenBank:WP_040144699.1;Name=WP_040144699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009980272.1;locus_tag=LDO45_RS08230;product=DUF4126 domain-containing protein;protein_id=WP_040144699.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 62733 63053 . - . ID=gene-LDO45_RS08235;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=LDO45_RS08235;old_locus_tag=BDI4_160065 NZ_CAJZAS010000068.1 Protein Homology CDS 62733 63053 . - 0 ID=cds-WP_059533257.1;Parent=gene-LDO45_RS08235;Dbxref=GenBank:WP_059533257.1;Name=WP_059533257.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896472.1;locus_tag=LDO45_RS08235;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_059533257.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 63233 63517 . - . ID=gene-LDO45_RS08240;Name=LDO45_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08240;old_locus_tag=BDI4_160066 NZ_CAJZAS010000068.1 Protein Homology CDS 63233 63517 . - 0 ID=cds-WP_059533259.1;Parent=gene-LDO45_RS08240;Dbxref=GenBank:WP_059533259.1;Name=WP_059533259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483516.1;locus_tag=LDO45_RS08240;product=DUF333 domain-containing protein;protein_id=WP_059533259.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 63676 64374 . - . ID=gene-LDO45_RS08245;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=LDO45_RS08245;old_locus_tag=BDI4_160067 NZ_CAJZAS010000068.1 Protein Homology CDS 63676 64374 . - 0 ID=cds-WP_059533261.1;Parent=gene-LDO45_RS08245;Dbxref=GenBank:WP_059533261.1;Name=WP_059533261.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752204.1;locus_tag=LDO45_RS08245;product=two-component system response regulator KdpE;protein_id=WP_059533261.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 64367 67210 . - . ID=gene-LDO45_RS08250;Name=LDO45_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08250;old_locus_tag=BDI4_160068 NZ_CAJZAS010000068.1 Protein Homology CDS 64367 67210 . - 0 ID=cds-WP_059533263.1;Parent=gene-LDO45_RS08250;Dbxref=GenBank:WP_059533263.1;Name=WP_059533263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398755.1;locus_tag=LDO45_RS08250;product=sensor histidine kinase KdpD;protein_id=WP_059533263.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 67358 67939 . - . ID=gene-LDO45_RS08255;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=LDO45_RS08255;old_locus_tag=BDI4_160069 NZ_CAJZAS010000068.1 Protein Homology CDS 67358 67939 . - 0 ID=cds-WP_059689394.1;Parent=gene-LDO45_RS08255;Dbxref=GenBank:WP_059689394.1;Name=WP_059689394.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102455.1;locus_tag=LDO45_RS08255;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_059689394.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 67967 70051 . - . ID=gene-LDO45_RS08260;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=LDO45_RS08260;old_locus_tag=BDI4_160070 NZ_CAJZAS010000068.1 Protein Homology CDS 67967 70051 . - 0 ID=cds-WP_223961024.1;Parent=gene-LDO45_RS08260;Dbxref=GenBank:WP_223961024.1;Name=WP_223961024.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352735.1;locus_tag=LDO45_RS08260;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_223961024.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 70106 71911 . - . ID=gene-LDO45_RS08265;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=LDO45_RS08265;old_locus_tag=BDI4_160071 NZ_CAJZAS010000068.1 Protein Homology CDS 70106 71911 . - 0 ID=cds-WP_059703417.1;Parent=gene-LDO45_RS08265;Dbxref=GenBank:WP_059703417.1;Name=WP_059703417.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352736.1;locus_tag=LDO45_RS08265;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_059703417.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 71908 72000 . - . ID=gene-LDO45_RS08270;Name=kdpF;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=LDO45_RS08270 NZ_CAJZAS010000068.1 Protein Homology CDS 71908 72000 . - 0 ID=cds-WP_006752209.1;Parent=gene-LDO45_RS08270;Dbxref=GenBank:WP_006752209.1;Name=WP_006752209.1;Ontology_term=GO:0006813,GO:0043462,GO:0031004;gbkey=CDS;gene=kdpF;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_process=potassium ion transport|0006813||IEA,regulation of ATP-dependent activity|0043462||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331558.1;locus_tag=LDO45_RS08270;product=K(+)-transporting ATPase subunit F;protein_id=WP_006752209.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 72308 73282 . - . ID=gene-LDO45_RS08275;Name=LDO45_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08275;old_locus_tag=BDI4_160072 NZ_CAJZAS010000068.1 Protein Homology CDS 72308 73282 . - 0 ID=cds-WP_223961026.1;Parent=gene-LDO45_RS08275;Dbxref=GenBank:WP_223961026.1;Name=WP_223961026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405597.1;locus_tag=LDO45_RS08275;product=quinone oxidoreductase;protein_id=WP_223961026.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 73455 73847 . - . ID=gene-LDO45_RS08280;Name=LDO45_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08280;old_locus_tag=BDI4_160073 NZ_CAJZAS010000068.1 Protein Homology CDS 73455 73847 . - 0 ID=cds-WP_059533273.1;Parent=gene-LDO45_RS08280;Dbxref=GenBank:WP_059533273.1;Name=WP_059533273.1;Ontology_term=GO:0019242,GO:0008929;gbkey=CDS;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752212.1;locus_tag=LDO45_RS08280;product=methylglyoxal synthase;protein_id=WP_059533273.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 73903 74682 . - . ID=gene-LDO45_RS08285;Name=LDO45_RS08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08285;old_locus_tag=BDI4_160074 NZ_CAJZAS010000068.1 Protein Homology CDS 73903 74682 . - 0 ID=cds-WP_059703420.1;Parent=gene-LDO45_RS08285;Dbxref=GenBank:WP_059703420.1;Name=WP_059703420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892270.1;locus_tag=LDO45_RS08285;product=SDR family oxidoreductase;protein_id=WP_059703420.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 74900 75550 . + . ID=gene-LDO45_RS08290;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=LDO45_RS08290;old_locus_tag=BDI4_160075 NZ_CAJZAS010000068.1 Protein Homology CDS 74900 75550 . + 0 ID=cds-WP_006478229.1;Parent=gene-LDO45_RS08290;Dbxref=GenBank:WP_006478229.1;Name=WP_006478229.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091140.1;locus_tag=LDO45_RS08290;product=uracil phosphoribosyltransferase;protein_id=WP_006478229.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 75768 76496 . + . ID=gene-LDO45_RS08295;Name=LDO45_RS08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08295;old_locus_tag=BDI4_160076 NZ_CAJZAS010000068.1 Protein Homology CDS 75768 76496 . + 0 ID=cds-WP_044844700.1;Parent=gene-LDO45_RS08295;Dbxref=GenBank:WP_044844700.1;Name=WP_044844700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091139.1;locus_tag=LDO45_RS08295;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_044844700.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 76602 77882 . + . ID=gene-LDO45_RS08300;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=LDO45_RS08300;old_locus_tag=BDI4_160077 NZ_CAJZAS010000068.1 Protein Homology CDS 76602 77882 . + 0 ID=cds-WP_059468145.1;Parent=gene-LDO45_RS08300;Dbxref=GenBank:WP_059468145.1;Name=WP_059468145.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657519.1;locus_tag=LDO45_RS08300;product=phosphoribosylamine--glycine ligase;protein_id=WP_059468145.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 78001 78921 . + . ID=gene-LDO45_RS08305;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=LDO45_RS08305;old_locus_tag=BDI4_160078 NZ_CAJZAS010000068.1 Protein Homology CDS 78001 78921 . + 0 ID=cds-WP_223961028.1;Parent=gene-LDO45_RS08305;Dbxref=GenBank:WP_223961028.1;Name=WP_223961028.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405601.1;locus_tag=LDO45_RS08305;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_223961028.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 78918 79676 . + . ID=gene-LDO45_RS08310;Name=LDO45_RS08310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08310;old_locus_tag=BDI4_160079 NZ_CAJZAS010000068.1 Protein Homology CDS 78918 79676 . + 0 ID=cds-WP_373557203.1;Parent=gene-LDO45_RS08310;Dbxref=GenBank:WP_373557203.1;Name=WP_373557203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364347.1;locus_tag=LDO45_RS08310;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_373557203.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 79681 80127 . + . ID=gene-LDO45_RS08315;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=LDO45_RS08315;old_locus_tag=BDI4_160080 NZ_CAJZAS010000068.1 Protein Homology CDS 79681 80127 . + 0 ID=cds-WP_059533282.1;Parent=gene-LDO45_RS08315;Dbxref=GenBank:WP_059533282.1;Name=WP_059533282.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398740.1;locus_tag=LDO45_RS08315;product=ribosome silencing factor;protein_id=WP_059533282.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 80147 80617 . + . ID=gene-LDO45_RS08320;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=LDO45_RS08320;old_locus_tag=BDI4_160081 NZ_CAJZAS010000068.1 Protein Homology CDS 80147 80617 . + 0 ID=cds-WP_044844705.1;Parent=gene-LDO45_RS08320;Dbxref=GenBank:WP_044844705.1;Name=WP_044844705.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352746.1;locus_tag=LDO45_RS08320;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_044844705.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 80669 81301 . + . ID=gene-LDO45_RS08325;Name=LDO45_RS08325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08325;old_locus_tag=BDI4_160082 NZ_CAJZAS010000068.1 Protein Homology CDS 80669 81301 . + 0 ID=cds-WP_223961030.1;Parent=gene-LDO45_RS08325;Dbxref=GenBank:WP_223961030.1;Name=WP_223961030.1;Ontology_term=GO:0009117,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352747.1;locus_tag=LDO45_RS08325;product=nucleoside triphosphate pyrophosphatase;protein_id=WP_223961030.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 81310 82779 . + . ID=gene-LDO45_RS08330;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=LDO45_RS08330;old_locus_tag=BDI4_160083 NZ_CAJZAS010000068.1 Protein Homology CDS 81310 82779 . + 0 ID=cds-WP_059703423.1;Parent=gene-LDO45_RS08330;Dbxref=GenBank:WP_059703423.1;Name=WP_059703423.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545847.1;locus_tag=LDO45_RS08330;product=ribonuclease G;protein_id=WP_059703423.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 82901 83236 . + . ID=gene-LDO45_RS08335;Name=LDO45_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08335;old_locus_tag=BDI4_160084 NZ_CAJZAS010000068.1 Protein Homology CDS 82901 83236 . + 0 ID=cds-WP_059527263.1;Parent=gene-LDO45_RS08335;Dbxref=GenBank:WP_059527263.1;Name=WP_059527263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478219.1;locus_tag=LDO45_RS08335;product=YggL family protein;protein_id=WP_059527263.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 83562 84527 . + . ID=gene-LDO45_RS08340;Name=LDO45_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08340;old_locus_tag=BDI4_160085 NZ_CAJZAS010000068.1 Protein Homology CDS 83562 84527 . + 0 ID=cds-WP_059527265.1;Parent=gene-LDO45_RS08340;Dbxref=GenBank:WP_059527265.1;Name=WP_059527265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415303.1;locus_tag=LDO45_RS08340;product=PRC-barrel domain-containing protein;protein_id=WP_059527265.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 84524 85783 . + . ID=gene-LDO45_RS08345;Name=LDO45_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08345;old_locus_tag=BDI4_160086 NZ_CAJZAS010000068.1 Protein Homology CDS 84524 85783 . + 0 ID=cds-WP_223961032.1;Parent=gene-LDO45_RS08345;Dbxref=GenBank:WP_223961032.1;Name=WP_223961032.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761058.1;locus_tag=LDO45_RS08345;product=MFS transporter;protein_id=WP_223961032.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 85815 86393 . + . ID=gene-LDO45_RS08350;Name=LDO45_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08350;old_locus_tag=BDI4_160087 NZ_CAJZAS010000068.1 Protein Homology CDS 85815 86393 . + 0 ID=cds-WP_059689405.1;Parent=gene-LDO45_RS08350;Dbxref=GenBank:WP_059689405.1;Name=WP_059689405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761059.1;locus_tag=LDO45_RS08350;product=aromatic acid exporter family protein;protein_id=WP_059689405.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 86452 86844 . - . ID=gene-LDO45_RS08355;Name=LDO45_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08355;old_locus_tag=BDI4_160088 NZ_CAJZAS010000068.1 Protein Homology CDS 86452 86844 . - 0 ID=cds-WP_059820635.1;Parent=gene-LDO45_RS08355;Dbxref=GenBank:WP_059820635.1;Name=WP_059820635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405607.1;locus_tag=LDO45_RS08355;product=RcnB family protein;protein_id=WP_059820635.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 86933 88684 . - . ID=gene-LDO45_RS08360;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=LDO45_RS08360;old_locus_tag=BDI4_160089 NZ_CAJZAS010000068.1 Protein Homology CDS 86933 88684 . - 0 ID=cds-WP_059689407.1;Parent=gene-LDO45_RS08360;Dbxref=GenBank:WP_059689407.1;Name=WP_059689407.1;Ontology_term=GO:0006869,GO:0005319,GO:0005524,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=lipid transporter activity|0005319||IEA,ATP binding|0005524||IEA;go_process=lipid transport|0006869||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896445.1;locus_tag=LDO45_RS08360;product=lipid A export permease/ATP-binding protein MsbA;protein_id=WP_059689407.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 88908 89660 . + . ID=gene-LDO45_RS08365;Name=LDO45_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08365;old_locus_tag=BDI4_160090 NZ_CAJZAS010000068.1 Protein Homology CDS 88908 89660 . + 0 ID=cds-WP_059527280.1;Parent=gene-LDO45_RS08365;Dbxref=GenBank:WP_059527280.1;Name=WP_059527280.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364356.1;locus_tag=LDO45_RS08365;product=glycosyltransferase family 2 protein;protein_id=WP_059527280.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 89805 90647 . + . ID=gene-LDO45_RS08370;Name=LDO45_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08370;old_locus_tag=BDI4_160091 NZ_CAJZAS010000068.1 Protein Homology CDS 89805 90647 . + 0 ID=cds-WP_223961034.1;Parent=gene-LDO45_RS08370;Dbxref=GenBank:WP_223961034.1;Name=WP_223961034.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409051.1;locus_tag=LDO45_RS08370;product=glycosyltransferase family 2 protein;protein_id=WP_223961034.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 90782 92062 . + . ID=gene-LDO45_RS08375;Name=LDO45_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08375;old_locus_tag=BDI4_160092 NZ_CAJZAS010000068.1 Protein Homology CDS 90782 92062 . + 0 ID=cds-WP_223961036.1;Parent=gene-LDO45_RS08375;Dbxref=GenBank:WP_223961036.1;Name=WP_223961036.1;Ontology_term=GO:0008754,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=O antigen ligase activity|0008754||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657533.1;locus_tag=LDO45_RS08375;product=O-antigen ligase;protein_id=WP_223961036.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 92211 93389 . - . ID=gene-LDO45_RS08380;Name=LDO45_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08380;old_locus_tag=BDI4_160093 NZ_CAJZAS010000068.1 Protein Homology CDS 92211 93389 . - 0 ID=cds-WP_059689411.1;Parent=gene-LDO45_RS08380;Dbxref=GenBank:WP_059689411.1;Name=WP_059689411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328936.1;locus_tag=LDO45_RS08380;product=glycosyltransferase family 9 protein;protein_id=WP_059689411.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 93586 94674 . - . ID=gene-LDO45_RS08385;Name=LDO45_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08385;old_locus_tag=BDI4_160094 NZ_CAJZAS010000068.1 Protein Homology CDS 93586 94674 . - 0 ID=cds-WP_223961038.1;Parent=gene-LDO45_RS08385;Dbxref=GenBank:WP_223961038.1;Name=WP_223961038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657535.1;locus_tag=LDO45_RS08385;product=glycosyltransferase family 9 protein;protein_id=WP_223961038.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 94995 98528 . - . ID=gene-LDO45_RS08390;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=LDO45_RS08390;old_locus_tag=BDI4_160095 NZ_CAJZAS010000068.1 Protein Homology CDS 94995 98528 . - 0 ID=cds-WP_223961040.1;Parent=gene-LDO45_RS08390;Dbxref=GenBank:WP_223961040.1;Name=WP_223961040.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892329.1;locus_tag=LDO45_RS08390;product=DNA polymerase III subunit alpha;protein_id=WP_223961040.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 98751 99605 . + . ID=gene-LDO45_RS08395;Name=LDO45_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08395;old_locus_tag=BDI4_160096 NZ_CAJZAS010000068.1 Protein Homology CDS 98751 99605 . + 0 ID=cds-WP_223961042.1;Parent=gene-LDO45_RS08395;Dbxref=GenBank:WP_223961042.1;Name=WP_223961042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758622.1;locus_tag=LDO45_RS08395;product=sulfurtransferase;protein_id=WP_223961042.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 99628 100521 . + . ID=gene-LDO45_RS08400;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=LDO45_RS08400;old_locus_tag=BDI4_160097 NZ_CAJZAS010000068.1 Protein Homology CDS 99628 100521 . + 0 ID=cds-WP_223961044.1;Parent=gene-LDO45_RS08400;Dbxref=GenBank:WP_223961044.1;Name=WP_223961044.1;Ontology_term=GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;gene=gluQRS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896437.1;locus_tag=LDO45_RS08400;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_223961044.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 100768 102315 . - . ID=gene-LDO45_RS08405;Name=LDO45_RS08405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08405;old_locus_tag=BDI4_160098 NZ_CAJZAS010000068.1 Protein Homology CDS 100768 102315 . - 0 ID=cds-WP_059528283.1;Parent=gene-LDO45_RS08405;Dbxref=GenBank:WP_059528283.1;Name=WP_059528283.1;Ontology_term=GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545860.1;locus_tag=LDO45_RS08405;product=DEAD/DEAH box helicase;protein_id=WP_059528283.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 102748 103131 . - . ID=gene-LDO45_RS08410;Name=LDO45_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08410;old_locus_tag=BDI4_160099 NZ_CAJZAS010000068.1 Protein Homology CDS 102748 103131 . - 0 ID=cds-WP_175910922.1;Parent=gene-LDO45_RS08410;Dbxref=GenBank:WP_175910922.1;Name=WP_175910922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415292.1;locus_tag=LDO45_RS08410;product=MliC family protein;protein_id=WP_175910922.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 103214 103408 . - . ID=gene-LDO45_RS08415;Name=LDO45_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08415;old_locus_tag=BDI4_160100 NZ_CAJZAS010000068.1 Protein Homology CDS 103214 103408 . - 0 ID=cds-WP_223961046.1;Parent=gene-LDO45_RS08415;Dbxref=GenBank:WP_223961046.1;Name=WP_223961046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415297.1;locus_tag=LDO45_RS08415;product=DUF6726 family protein;protein_id=WP_223961046.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 103427 104641 . - . ID=gene-LDO45_RS08420;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=LDO45_RS08420;old_locus_tag=BDI4_160101 NZ_CAJZAS010000068.1 Protein Homology CDS 103427 104641 . - 0 ID=cds-WP_059703437.1;Parent=gene-LDO45_RS08420;Dbxref=GenBank:WP_059703437.1;Name=WP_059703437.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698942.1;locus_tag=LDO45_RS08420;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_059703437.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq gene 104857 105402 . + . ID=gene-LDO45_RS08425;Name=LDO45_RS08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08425;old_locus_tag=BDI4_160102 NZ_CAJZAS010000068.1 Protein Homology CDS 104857 105402 . + 0 ID=cds-WP_223961048.1;Parent=gene-LDO45_RS08425;Dbxref=GenBank:WP_223961048.1;Name=WP_223961048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753762.1;locus_tag=LDO45_RS08425;product=META domain-containing protein;protein_id=WP_223961048.1;transl_table=11 NZ_CAJZAS010000068.1 RefSeq pseudogene 105583 106331 . + . ID=gene-LDO45_RS08430;Name=LDO45_RS08430;end_range=106331,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS08430;partial=true;pseudo=true NZ_CAJZAS010000068.1 Protein Homology CDS 105583 106331 . + 0 ID=cds-LDO45_RS08430;Parent=gene-LDO45_RS08430;Note=too many ambiguous residues%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=106331,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405620.1;locus_tag=LDO45_RS08430;partial=true;product=DNA translocase FtsK;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000069.1 1 864 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000069.1 RefSeq region 1 864 . + . ID=NZ_CAJZAS010000069.1:1..864;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_160 NZ_CAJZAS010000069.1 RefSeq gene 1 199 . + . ID=gene-LDO45_RS08435;Name=LDO45_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08435;old_locus_tag=BDI4_1600001;partial=true;start_range=.,1 NZ_CAJZAS010000069.1 GeneMarkS-2+ CDS 1 199 . + 1 ID=cds-WP_223961058.1;Parent=gene-LDO45_RS08435;Dbxref=GenBank:WP_223961058.1;Name=WP_223961058.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS08435;partial=true;product=hypothetical protein;protein_id=WP_223961058.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000069.1 RefSeq gene 462 864 . + . ID=gene-LDO45_RS08440;Name=LDO45_RS08440;end_range=864,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08440;partial=true NZ_CAJZAS010000069.1 Protein Homology CDS 462 864 . + 0 ID=cds-WP_290371004.1;Parent=gene-LDO45_RS08440;Dbxref=GenBank:WP_290371004.1;Name=WP_290371004.1;end_range=864,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012409.5;locus_tag=LDO45_RS08440;partial=true;product=glycoside hydrolase family 19 protein;protein_id=WP_290371004.1;transl_table=11 ##sequence-region NZ_CAJZAS010000070.1 1 1521 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000070.1 RefSeq region 1 1521 . + . ID=NZ_CAJZAS010000070.1:1..1521;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_161 NZ_CAJZAS010000070.1 RefSeq pseudogene 1 80 . + . ID=gene-LDO45_RS34505;Name=LDO45_RS34505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34505;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000070.1 Protein Homology CDS 1 80 . + 2 ID=cds-LDO45_RS34505;Parent=gene-LDO45_RS34505;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004556790.1;locus_tag=LDO45_RS34505;partial=true;product=peptide transporter;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000070.1 RefSeq gene 339 632 . + . ID=gene-LDO45_RS08445;Name=LDO45_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08445;old_locus_tag=BDI4_1610001 NZ_CAJZAS010000070.1 Protein Homology CDS 339 632 . + 0 ID=cds-WP_223961061.1;Parent=gene-LDO45_RS08445;Dbxref=GenBank:WP_223961061.1;Name=WP_223961061.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004556791.1;locus_tag=LDO45_RS08445;product=hypothetical protein;protein_id=WP_223961061.1;transl_table=11 ##sequence-region NZ_CAJZAS010000071.1 1 2252 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000071.1 RefSeq region 1 2252 . + . ID=NZ_CAJZAS010000071.1:1..2252;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_162 NZ_CAJZAS010000071.1 RefSeq gene 528 671 . - . ID=gene-LDO45_RS08450;Name=LDO45_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08450 NZ_CAJZAS010000071.1 GeneMarkS-2+ CDS 528 671 . - 0 ID=cds-WP_223961063.1;Parent=gene-LDO45_RS08450;Dbxref=GenBank:WP_223961063.1;Name=WP_223961063.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS08450;product=hypothetical protein;protein_id=WP_223961063.1;transl_table=11 NZ_CAJZAS010000071.1 RefSeq gene 668 1345 . - . ID=gene-LDO45_RS08455;Name=LDO45_RS08455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08455;old_locus_tag=BDI4_1620001 NZ_CAJZAS010000071.1 GeneMarkS-2+ CDS 668 1345 . - 0 ID=cds-WP_223961064.1;Parent=gene-LDO45_RS08455;Dbxref=GenBank:WP_223961064.1;Name=WP_223961064.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS08455;product=hypothetical protein;protein_id=WP_223961064.1;transl_table=11 NZ_CAJZAS010000071.1 RefSeq pseudogene 1614 2011 . - . ID=gene-LDO45_RS08460;Name=LDO45_RS08460;end_range=2011,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS08460;partial=true;pseudo=true NZ_CAJZAS010000071.1 Protein Homology CDS 1614 2011 . - 0 ID=cds-LDO45_RS08460;Parent=gene-LDO45_RS08460;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=2011,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546399.1;locus_tag=LDO45_RS08460;partial=true;product=GNA1162 family protein;pseudo=true;transl_table=11 NZ_CAJZAS010000071.1 RefSeq gene 2102 2252 . - . ID=gene-LDO45_RS08465;Name=LDO45_RS08465;end_range=2252,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08465;old_locus_tag=BDI4_1620004;partial=true NZ_CAJZAS010000071.1 Protein Homology CDS 2102 2252 . - 1 ID=cds-WP_223961066.1;Parent=gene-LDO45_RS08465;Dbxref=GenBank:WP_223961066.1;Name=WP_223961066.1;end_range=2252,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416254.1;locus_tag=LDO45_RS08465;partial=true;product=DUF4810 domain-containing protein;protein_id=WP_223961066.1;transl_table=11 ##sequence-region NZ_CAJZAS010000072.1 1 602 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000072.1 RefSeq region 1 602 . + . ID=NZ_CAJZAS010000072.1:1..602;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_163 NZ_CAJZAS010000072.1 RefSeq gene 230 602 . + . ID=gene-LDO45_RS08470;Name=LDO45_RS08470;end_range=602,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08470;partial=true NZ_CAJZAS010000072.1 Protein Homology CDS 230 602 . + 0 ID=cds-WP_223961068.1;Parent=gene-LDO45_RS08470;Dbxref=GenBank:WP_223961068.1;Name=WP_223961068.1;end_range=602,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493799.1;locus_tag=LDO45_RS08470;partial=true;product=hypothetical protein;protein_id=WP_223961068.1;transl_table=11 ##sequence-region NZ_CAJZAS010000073.1 1 22055 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000073.1 RefSeq region 1 22055 . + . ID=NZ_CAJZAS010000073.1:1..22055;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_164 NZ_CAJZAS010000073.1 RefSeq pseudogene 1 163 . + . ID=gene-LDO45_RS08475;Name=LDO45_RS08475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS08475;old_locus_tag=BDI4_1640001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000073.1 Protein Homology CDS 1 163 . + 1 ID=cds-LDO45_RS08475;Parent=gene-LDO45_RS08475;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549519.1;locus_tag=LDO45_RS08475;partial=true;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000073.1 RefSeq gene 160 660 . + . ID=gene-LDO45_RS08480;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=LDO45_RS08480;old_locus_tag=BDI4_1640002 NZ_CAJZAS010000073.1 Protein Homology CDS 160 660 . + 0 ID=cds-WP_223961070.1;Parent=gene-LDO45_RS08480;Dbxref=GenBank:WP_223961070.1;Name=WP_223961070.1;Ontology_term=GO:0036211,GO:0042254,GO:0008999;gbkey=CDS;gene=rimI;go_function=peptide-alanine-alpha-N-acetyltransferase activity|0008999||IEA;go_process=protein modification process|0036211||IEA,ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364154.1;locus_tag=LDO45_RS08480;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_223961070.1;transl_table=11 NZ_CAJZAS010000073.1 RefSeq gene 647 1693 . + . ID=gene-LDO45_RS08485;Name=LDO45_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08485;old_locus_tag=BDI4_1640003 NZ_CAJZAS010000073.1 Protein Homology CDS 647 1693 . + 0 ID=cds-WP_223961072.1;Parent=gene-LDO45_RS08485;Dbxref=GenBank:WP_223961072.1;Name=WP_223961072.1;Ontology_term=GO:0006281,GO:0004844,GO:0046872,GO:0051539;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754538.1;locus_tag=LDO45_RS08485;product=uracil-DNA glycosylase;protein_id=WP_223961072.1;transl_table=11 NZ_CAJZAS010000073.1 RefSeq gene 1690 2649 . + . ID=gene-LDO45_RS08490;Name=LDO45_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08490;old_locus_tag=BDI4_1640004 NZ_CAJZAS010000073.1 Protein Homology CDS 1690 2649 . + 0 ID=cds-WP_223961074.1;Parent=gene-LDO45_RS08490;Dbxref=GenBank:WP_223961074.1;Name=WP_223961074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478466.1;locus_tag=LDO45_RS08490;product=DUF1853 family protein;protein_id=WP_223961074.1;transl_table=11 NZ_CAJZAS010000073.1 RefSeq gene 2668 3477 . - . ID=gene-LDO45_RS08495;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=LDO45_RS08495;old_locus_tag=BDI4_1640005 NZ_CAJZAS010000073.1 Protein Homology CDS 2668 3477 . - 0 ID=cds-WP_223961076.1;Parent=gene-LDO45_RS08495;Dbxref=GenBank:WP_223961076.1;Name=WP_223961076.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092038.1;locus_tag=LDO45_RS08495;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_223961076.1;transl_table=11 NZ_CAJZAS010000073.1 RefSeq gene 3536 4843 . - . ID=gene-LDO45_RS08500;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=LDO45_RS08500;old_locus_tag=BDI4_1640006 NZ_CAJZAS010000073.1 Protein Homology CDS 3536 4843 . - 0 ID=cds-WP_059529280.1;Parent=gene-LDO45_RS08500;Dbxref=GenBank:WP_059529280.1;Name=WP_059529280.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885164.1;locus_tag=LDO45_RS08500;product=lysophospholipid transporter LplT;protein_id=WP_059529280.1;transl_table=11 NZ_CAJZAS010000073.1 RefSeq gene 5062 6132 . + . ID=gene-LDO45_RS08505;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=LDO45_RS08505;old_locus_tag=BDI4_1640007 NZ_CAJZAS010000073.1 Protein Homology CDS 5062 6132 . + 0 ID=cds-WP_223961078.1;Parent=gene-LDO45_RS08505;Dbxref=GenBank:WP_223961078.1;Name=WP_223961078.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331722.1;locus_tag=LDO45_RS08505;product=alanine racemase;protein_id=WP_223961078.1;transl_table=11 NZ_CAJZAS010000073.1 RefSeq gene 6144 7520 . + . ID=gene-LDO45_RS08510;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=LDO45_RS08510;old_locus_tag=BDI4_1640008 NZ_CAJZAS010000073.1 Protein Homology CDS 6144 7520 . + 0 ID=cds-WP_044847946.1;Parent=gene-LDO45_RS08510;Dbxref=GenBank:WP_044847946.1;Name=WP_044847946.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026043.1;locus_tag=LDO45_RS08510;product=DNA repair protein RadA;protein_id=WP_044847946.1;transl_table=11 NZ_CAJZAS010000073.1 RefSeq gene 7670 7936 . + . ID=gene-LDO45_RS08515;Name=LDO45_RS08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08515;old_locus_tag=BDI4_1640009 NZ_CAJZAS010000073.1 Protein Homology CDS 7670 7936 . + 0 ID=cds-WP_059529286.1;Parent=gene-LDO45_RS08515;Dbxref=GenBank:WP_059529286.1;Name=WP_059529286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759630.1;locus_tag=LDO45_RS08515;product=DUF2866 domain-containing protein;protein_id=WP_059529286.1;transl_table=11 NZ_CAJZAS010000073.1 RefSeq gene 8128 10059 . - . ID=gene-LDO45_RS08520;Name=LDO45_RS08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08520;old_locus_tag=BDI4_1640010 NZ_CAJZAS010000073.1 Protein Homology CDS 8128 10059 . - 0 ID=cds-WP_223961080.1;Parent=gene-LDO45_RS08520;Dbxref=GenBank:WP_223961080.1;Name=WP_223961080.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851825.1;locus_tag=LDO45_RS08520;product=ATP-binding cassette domain-containing protein;protein_id=WP_223961080.1;transl_table=11 NZ_CAJZAS010000073.1 RefSeq gene 10196 10675 . + . ID=gene-LDO45_RS08525;Name=LDO45_RS08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08525;old_locus_tag=BDI4_1640011 NZ_CAJZAS010000073.1 Protein Homology CDS 10196 10675 . + 0 ID=cds-WP_059529292.1;Parent=gene-LDO45_RS08525;Dbxref=GenBank:WP_059529292.1;Name=WP_059529292.1;Ontology_term=GO:0004602,GO:0043295;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA,glutathione binding|0043295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904829.1;locus_tag=LDO45_RS08525;product=glutathione peroxidase;protein_id=WP_059529292.1;transl_table=11 NZ_CAJZAS010000073.1 RefSeq gene 10796 12235 . - . ID=gene-LDO45_RS08530;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=LDO45_RS08530;old_locus_tag=BDI4_1640012 NZ_CAJZAS010000073.1 Protein Homology CDS 10796 12235 . - 0 ID=cds-WP_223961081.1;Parent=gene-LDO45_RS08530;Dbxref=GenBank:WP_223961081.1;Name=WP_223961081.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601207.1;locus_tag=LDO45_RS08530;product=cardiolipin synthase;protein_id=WP_223961081.1;transl_table=11 NZ_CAJZAS010000073.1 RefSeq gene 12349 13257 . - . ID=gene-LDO45_RS08535;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=LDO45_RS08535;old_locus_tag=BDI4_1640013 NZ_CAJZAS010000073.1 Protein Homology CDS 12349 13257 . - 0 ID=cds-WP_059529297.1;Parent=gene-LDO45_RS08535;Dbxref=GenBank:WP_059529297.1;Name=WP_059529297.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755452.1;locus_tag=LDO45_RS08535;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_059529297.1;transl_table=11 NZ_CAJZAS010000073.1 RefSeq gene 13269 14408 . - . ID=gene-LDO45_RS08540;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=LDO45_RS08540;old_locus_tag=BDI4_1640014 NZ_CAJZAS010000073.1 Protein Homology CDS 13269 14408 . - 0 ID=cds-WP_059529300.1;Parent=gene-LDO45_RS08540;Dbxref=GenBank:WP_059529300.1;Name=WP_059529300.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493370.1;locus_tag=LDO45_RS08540;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_059529300.1;transl_table=11 NZ_CAJZAS010000073.1 RefSeq gene 14497 14865 . - . ID=gene-LDO45_RS08545;Name=LDO45_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08545;old_locus_tag=BDI4_1640015 NZ_CAJZAS010000073.1 Protein Homology CDS 14497 14865 . - 0 ID=cds-WP_044847939.1;Parent=gene-LDO45_RS08545;Dbxref=GenBank:WP_044847939.1;Name=WP_044847939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885155.1;locus_tag=LDO45_RS08545;product=ArsC family reductase;protein_id=WP_044847939.1;transl_table=11 NZ_CAJZAS010000073.1 RefSeq gene 14865 15692 . - . ID=gene-LDO45_RS08550;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=LDO45_RS08550;old_locus_tag=BDI4_1640016 NZ_CAJZAS010000073.1 Protein Homology CDS 14865 15692 . - 0 ID=cds-WP_006478479.1;Parent=gene-LDO45_RS08550;Dbxref=GenBank:WP_006478479.1;Name=WP_006478479.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007580558.1;locus_tag=LDO45_RS08550;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_006478479.1;transl_table=11 NZ_CAJZAS010000073.1 RefSeq gene 15738 16970 . - . ID=gene-LDO45_RS08555;Name=dapC;gbkey=Gene;gene=dapC;gene_biotype=protein_coding;locus_tag=LDO45_RS08555;old_locus_tag=BDI4_1640017 NZ_CAJZAS010000073.1 Protein Homology CDS 15738 16970 . - 0 ID=cds-WP_059529303.1;Parent=gene-LDO45_RS08555;Dbxref=GenBank:WP_059529303.1;Name=WP_059529303.1;Ontology_term=GO:0009089,GO:0009016;gbkey=CDS;gene=dapC;go_function=succinyldiaminopimelate transaminase activity|0009016||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402636.1;locus_tag=LDO45_RS08555;product=succinyldiaminopimelate transaminase;protein_id=WP_059529303.1;transl_table=11 NZ_CAJZAS010000073.1 RefSeq gene 17130 18071 . + . ID=gene-LDO45_RS08560;Name=LDO45_RS08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08560;old_locus_tag=BDI4_1640018 NZ_CAJZAS010000073.1 Protein Homology CDS 17130 18071 . + 0 ID=cds-WP_059701553.1;Parent=gene-LDO45_RS08560;Dbxref=GenBank:WP_059701553.1;Name=WP_059701553.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364141.1;locus_tag=LDO45_RS08560;product=DMT family transporter;protein_id=WP_059701553.1;transl_table=11 NZ_CAJZAS010000073.1 RefSeq gene 18211 21723 . + . ID=gene-LDO45_RS08565;Name=smc;gbkey=Gene;gene=smc;gene_biotype=protein_coding;locus_tag=LDO45_RS08565;old_locus_tag=BDI4_1640019 NZ_CAJZAS010000073.1 Protein Homology CDS 18211 21723 . + 0 ID=cds-WP_059701555.1;Parent=gene-LDO45_RS08565;Dbxref=GenBank:WP_059701555.1;Name=WP_059701555.1;Ontology_term=GO:0007059,GO:0030261,GO:0005524;gbkey=CDS;gene=smc;go_function=ATP binding|0005524||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527298.1;locus_tag=LDO45_RS08565;product=chromosome segregation protein SMC;protein_id=WP_059701555.1;transl_table=11 NZ_CAJZAS010000073.1 RefSeq pseudogene 21809 22055 . + . ID=gene-LDO45_RS08570;Name=LDO45_RS08570;end_range=22055,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS08570;partial=true;pseudo=true NZ_CAJZAS010000073.1 Protein Homology CDS 21809 22055 . + 0 ID=cds-LDO45_RS08570;Parent=gene-LDO45_RS08570;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=22055,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402639.1;locus_tag=LDO45_RS08570;partial=true;product=cell division protein FtsZ;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000074.1 1 1717 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000074.1 RefSeq region 1 1717 . + . ID=NZ_CAJZAS010000074.1:1..1717;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_165 NZ_CAJZAS010000074.1 RefSeq gene 199 420 . + . ID=gene-LDO45_RS08575;Name=LDO45_RS08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08575;old_locus_tag=BDI4_1650001 NZ_CAJZAS010000074.1 Protein Homology CDS 199 420 . + 0 ID=cds-WP_059527208.1;Parent=gene-LDO45_RS08575;Dbxref=GenBank:WP_059527208.1;Name=WP_059527208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480857.1;locus_tag=LDO45_RS08575;product=hypothetical protein;protein_id=WP_059527208.1;transl_table=11 NZ_CAJZAS010000074.1 RefSeq gene 545 1027 . + . ID=gene-LDO45_RS08580;Name=LDO45_RS08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08580;old_locus_tag=BDI4_1650002 NZ_CAJZAS010000074.1 Protein Homology CDS 545 1027 . + 0 ID=cds-WP_059527205.1;Parent=gene-LDO45_RS08580;Dbxref=GenBank:WP_059527205.1;Name=WP_059527205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547296.1;locus_tag=LDO45_RS08580;product=hypothetical protein;protein_id=WP_059527205.1;transl_table=11 NZ_CAJZAS010000074.1 RefSeq gene 1081 1717 . + . ID=gene-LDO45_RS08585;Name=sctJ;end_range=1717,.;gbkey=Gene;gene=sctJ;gene_biotype=protein_coding;locus_tag=LDO45_RS08585;partial=true NZ_CAJZAS010000074.1 Protein Homology CDS 1081 1717 . + 0 ID=cds-WP_223961084.1;Parent=gene-LDO45_RS08585;Dbxref=GenBank:WP_223961084.1;Name=WP_223961084.1;Ontology_term=GO:0009306,GO:0030254;end_range=1717,.;gbkey=CDS;gene=sctJ;go_process=protein secretion|0009306||IEA,protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725404.1;locus_tag=LDO45_RS08585;partial=true;product=type III secretion system inner membrane ring lipoprotein SctJ;protein_id=WP_223961084.1;transl_table=11 ##sequence-region NZ_CAJZAS010000075.1 1 7840 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000075.1 RefSeq region 1 7840 . + . ID=NZ_CAJZAS010000075.1:1..7840;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_166 NZ_CAJZAS010000075.1 RefSeq pseudogene 1 508 . - . ID=gene-LDO45_RS08590;Name=LDO45_RS08590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS08590;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000075.1 Protein Homology CDS 1 508 . - 0 ID=cds-LDO45_RS08590;Parent=gene-LDO45_RS08590;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723835.1;locus_tag=LDO45_RS08590;partial=true;product=flagellar hook-length control protein FliK;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000075.1 RefSeq gene 584 916 . - . ID=gene-LDO45_RS08595;Name=LDO45_RS08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08595;old_locus_tag=BDI4_1660003 NZ_CAJZAS010000075.1 Protein Homology CDS 584 916 . - 0 ID=cds-WP_059535015.1;Parent=gene-LDO45_RS08595;Dbxref=GenBank:WP_059535015.1;Name=WP_059535015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197170.1;locus_tag=LDO45_RS08595;product=flagellar protein FliT;protein_id=WP_059535015.1;transl_table=11 NZ_CAJZAS010000075.1 RefSeq gene 913 1347 . - . ID=gene-LDO45_RS08600;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=LDO45_RS08600;old_locus_tag=BDI4_1660004 NZ_CAJZAS010000075.1 Protein Homology CDS 913 1347 . - 0 ID=cds-WP_059535013.1;Parent=gene-LDO45_RS08600;Dbxref=GenBank:WP_059535013.1;Name=WP_059535013.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203429.1;locus_tag=LDO45_RS08600;product=flagellar export chaperone FliS;protein_id=WP_059535013.1;transl_table=11 NZ_CAJZAS010000075.1 RefSeq gene 1523 1867 . - . ID=gene-LDO45_RS08605;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=LDO45_RS08605;old_locus_tag=BDI4_1660005 NZ_CAJZAS010000075.1 Protein Homology CDS 1523 1867 . - 0 ID=cds-WP_059448462.1;Parent=gene-LDO45_RS08605;Dbxref=GenBank:WP_059448462.1;Name=WP_059448462.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761724.1;locus_tag=LDO45_RS08605;product=flagellar hook-basal body complex protein FliE;protein_id=WP_059448462.1;transl_table=11 NZ_CAJZAS010000075.1 RefSeq gene 2118 3881 . + . ID=gene-LDO45_RS08610;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=LDO45_RS08610;old_locus_tag=BDI4_1660006 NZ_CAJZAS010000075.1 Protein Homology CDS 2118 3881 . + 0 ID=cds-WP_059819932.1;Parent=gene-LDO45_RS08610;Dbxref=GenBank:WP_059819932.1;Name=WP_059819932.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197168.1;locus_tag=LDO45_RS08610;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_059819932.1;transl_table=11 NZ_CAJZAS010000075.1 RefSeq gene 3871 4866 . + . ID=gene-LDO45_RS08615;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=LDO45_RS08615;old_locus_tag=BDI4_1660007 NZ_CAJZAS010000075.1 Protein Homology CDS 3871 4866 . + 0 ID=cds-WP_059535009.1;Parent=gene-LDO45_RS08615;Dbxref=GenBank:WP_059535009.1;Name=WP_059535009.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334572.1;locus_tag=LDO45_RS08615;product=flagellar motor switch protein FliG;protein_id=WP_059535009.1;transl_table=11 NZ_CAJZAS010000075.1 RefSeq gene 4859 5542 . + . ID=gene-LDO45_RS08620;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=LDO45_RS08620;old_locus_tag=BDI4_1660008 NZ_CAJZAS010000075.1 Protein Homology CDS 4859 5542 . + 0 ID=cds-WP_059535007.1;Parent=gene-LDO45_RS08620;Dbxref=GenBank:WP_059535007.1;Name=WP_059535007.1;Ontology_term=GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525877.1;locus_tag=LDO45_RS08620;product=flagellar assembly protein FliH;protein_id=WP_059535007.1;transl_table=11 NZ_CAJZAS010000075.1 RefSeq gene 5536 7077 . + . ID=gene-LDO45_RS08625;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=LDO45_RS08625;old_locus_tag=BDI4_1660009 NZ_CAJZAS010000075.1 Protein Homology CDS 5536 7077 . + 0 ID=cds-WP_223961086.1;Parent=gene-LDO45_RS08625;Dbxref=GenBank:WP_223961086.1;Name=WP_223961086.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658178.1;locus_tag=LDO45_RS08625;product=flagellar protein export ATPase FliI;protein_id=WP_223961086.1;transl_table=11 NZ_CAJZAS010000075.1 RefSeq gene 7083 7541 . + . ID=gene-LDO45_RS08630;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=LDO45_RS08630;old_locus_tag=BDI4_1660010 NZ_CAJZAS010000075.1 Protein Homology CDS 7083 7541 . + 0 ID=cds-WP_059535003.1;Parent=gene-LDO45_RS08630;Dbxref=GenBank:WP_059535003.1;Name=WP_059535003.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895750.1;locus_tag=LDO45_RS08630;product=flagellar export protein FliJ;protein_id=WP_059535003.1;transl_table=11 NZ_CAJZAS010000075.1 RefSeq pseudogene 7573 7840 . + . ID=gene-LDO45_RS08635;Name=LDO45_RS08635;end_range=7840,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS08635;partial=true;pseudo=true NZ_CAJZAS010000075.1 Protein Homology CDS 7573 7840 . + 0 ID=cds-LDO45_RS08635;Parent=gene-LDO45_RS08635;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=7840,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658180.1;locus_tag=LDO45_RS08635;partial=true;product=flagellar hook-length control protein FliK;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000076.1 1 1312 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000076.1 RefSeq region 1 1312 . + . ID=NZ_CAJZAS010000076.1:1..1312;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_167 NZ_CAJZAS010000076.1 RefSeq gene 54 1276 . + . ID=gene-LDO45_RS08640;Name=LDO45_RS08640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08640;old_locus_tag=BDI4_1670002 NZ_CAJZAS010000076.1 Protein Homology CDS 54 419 . + 0 ID=cds-WP_374109523.1;Parent=gene-LDO45_RS08640;Dbxref=GenBank:WP_374109523.1;Name=WP_374109523.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612240.1;locus_tag=LDO45_RS08640;product=IS3 family transposase;protein_id=WP_374109523.1;transl_table=11 NZ_CAJZAS010000076.1 Protein Homology CDS 422 1276 . + 0 ID=cds-WP_374109523.1;Parent=gene-LDO45_RS08640;Dbxref=GenBank:WP_374109523.1;Name=WP_374109523.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612240.1;locus_tag=LDO45_RS08640;product=IS3 family transposase;protein_id=WP_374109523.1;transl_table=11 ##sequence-region NZ_CAJZAS010000077.1 1 2779 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000077.1 RefSeq region 1 2779 . + . ID=NZ_CAJZAS010000077.1:1..2779;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_168 NZ_CAJZAS010000077.1 RefSeq pseudogene 1 687 . + . ID=gene-LDO45_RS34390;Name=LDO45_RS34390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34390;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000077.1 Protein Homology CDS 1 687 . + 1 ID=cds-LDO45_RS34390;Parent=gene-LDO45_RS34390;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396592.1;locus_tag=LDO45_RS34390;partial=true;product=SctK family type III secretion system sorting platform protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000077.1 RefSeq gene 669 1298 . + . ID=gene-LDO45_RS08650;Name=sctL;gbkey=Gene;gene=sctL;gene_biotype=protein_coding;locus_tag=LDO45_RS08650;old_locus_tag=BDI4_1680003 NZ_CAJZAS010000077.1 Protein Homology CDS 669 1298 . + 0 ID=cds-WP_059526757.1;Parent=gene-LDO45_RS08650;Dbxref=GenBank:WP_059526757.1;Name=WP_059526757.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctL;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547299.1;locus_tag=LDO45_RS08650;product=type III secretion system stator protein SctL;protein_id=WP_059526757.1;transl_table=11 NZ_CAJZAS010000077.1 RefSeq pseudogene 1295 2643 . + . ID=gene-LDO45_RS08655;Name=LDO45_RS08655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS08655;old_locus_tag=BDI4_1680004;pseudo=true NZ_CAJZAS010000077.1 Protein Homology CDS 1295 2643 . + 0 ID=cds-LDO45_RS08655;Parent=gene-LDO45_RS08655;Note=frameshifted%3B too many ambiguous residues;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216602.1;locus_tag=LDO45_RS08655;product=FliI/YscN family ATPase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000078.1 1 36149 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000078.1 RefSeq region 1 36149 . + . ID=NZ_CAJZAS010000078.1:1..36149;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_169 NZ_CAJZAS010000078.1 RefSeq gene 1 1005 . + . ID=gene-LDO45_RS08660;Name=LDO45_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08660;old_locus_tag=BDI4_1690001;partial=true;start_range=.,1 NZ_CAJZAS010000078.1 Protein Homology CDS 1 1005 . + 0 ID=cds-WP_290371005.1;Parent=gene-LDO45_RS08660;Dbxref=GenBank:WP_290371005.1;Name=WP_290371005.1;Ontology_term=GO:0003887;gbkey=CDS;go_function=DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213246.1;locus_tag=LDO45_RS08660;partial=true;product=DNA polymerase III subunit gamma/tau C-terminal domain-containing protein;protein_id=WP_290371005.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 1099 1425 . + . ID=gene-LDO45_RS08665;Name=LDO45_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08665;old_locus_tag=BDI4_1690002 NZ_CAJZAS010000078.1 Protein Homology CDS 1099 1425 . + 0 ID=cds-WP_006755698.1;Parent=gene-LDO45_RS08665;Dbxref=GenBank:WP_006755698.1;Name=WP_006755698.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006048866.1;locus_tag=LDO45_RS08665;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_006755698.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 1457 2053 . + . ID=gene-LDO45_RS08670;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=LDO45_RS08670;old_locus_tag=BDI4_1690003 NZ_CAJZAS010000078.1 Protein Homology CDS 1457 2053 . + 0 ID=cds-WP_014896897.1;Parent=gene-LDO45_RS08670;Dbxref=GenBank:WP_014896897.1;Name=WP_014896897.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875477.1;locus_tag=LDO45_RS08670;product=recombination mediator RecR;protein_id=WP_014896897.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 2102 3307 . + . ID=gene-LDO45_RS08675;Name=LDO45_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08675;old_locus_tag=BDI4_1690004 NZ_CAJZAS010000078.1 Protein Homology CDS 2102 3307 . + 0 ID=cds-WP_059529902.1;Parent=gene-LDO45_RS08675;Dbxref=GenBank:WP_059529902.1;Name=WP_059529902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191282.1;locus_tag=LDO45_RS08675;product=CaiB/BaiF CoA-transferase family protein;protein_id=WP_059529902.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 3520 4281 . + . ID=gene-LDO45_RS08680;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=LDO45_RS08680;old_locus_tag=BDI4_1690005 NZ_CAJZAS010000078.1 Protein Homology CDS 3520 4281 . + 0 ID=cds-WP_059529905.1;Parent=gene-LDO45_RS08680;Dbxref=GenBank:WP_059529905.1;Name=WP_059529905.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011488250.1;locus_tag=LDO45_RS08680;product=5'/3'-nucleotidase SurE;protein_id=WP_059529905.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 4278 5207 . + . ID=gene-LDO45_RS08685;Name=LDO45_RS08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08685;old_locus_tag=BDI4_1690006 NZ_CAJZAS010000078.1 Protein Homology CDS 4278 5207 . + 0 ID=cds-WP_059817537.1;Parent=gene-LDO45_RS08685;Dbxref=GenBank:WP_059817537.1;Name=WP_059817537.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352272.1;locus_tag=LDO45_RS08685;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_059817537.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 5213 6094 . + . ID=gene-LDO45_RS08690;Name=LDO45_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08690;old_locus_tag=BDI4_1690007 NZ_CAJZAS010000078.1 Protein Homology CDS 5213 6094 . + 0 ID=cds-WP_223961089.1;Parent=gene-LDO45_RS08690;Dbxref=GenBank:WP_223961089.1;Name=WP_223961089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478669.1;locus_tag=LDO45_RS08690;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_223961089.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 6106 7191 . + . ID=gene-LDO45_RS08695;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=LDO45_RS08695;old_locus_tag=BDI4_1690008 NZ_CAJZAS010000078.1 Protein Homology CDS 6106 7191 . + 0 ID=cds-WP_059817533.1;Parent=gene-LDO45_RS08695;Dbxref=GenBank:WP_059817533.1;Name=WP_059817533.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193640.1;locus_tag=LDO45_RS08695;product=RNA polymerase sigma factor RpoS;protein_id=WP_059817533.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 7195 7971 . + . ID=gene-LDO45_RS08700;Name=LDO45_RS08700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08700;old_locus_tag=BDI4_1690009 NZ_CAJZAS010000078.1 Protein Homology CDS 7195 7971 . + 0 ID=cds-WP_059449876.1;Parent=gene-LDO45_RS08700;Dbxref=GenBank:WP_059449876.1;Name=WP_059449876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851735.1;locus_tag=LDO45_RS08700;product=3'-5' exonuclease;protein_id=WP_059449876.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 7999 8853 . - . ID=gene-LDO45_RS08705;Name=LDO45_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08705;old_locus_tag=BDI4_1690010 NZ_CAJZAS010000078.1 Protein Homology CDS 7999 8853 . - 0 ID=cds-WP_223961091.1;Parent=gene-LDO45_RS08705;Dbxref=GenBank:WP_223961091.1;Name=WP_223961091.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723104.1;locus_tag=LDO45_RS08705;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_223961091.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 9063 10460 . + . ID=gene-LDO45_RS08710;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=LDO45_RS08710;old_locus_tag=BDI4_1690011 NZ_CAJZAS010000078.1 Protein Homology CDS 9063 10460 . + 0 ID=cds-WP_082721843.1;Parent=gene-LDO45_RS08710;Dbxref=GenBank:WP_082721843.1;Name=WP_082721843.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192701.1;locus_tag=LDO45_RS08710;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_082721843.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 10528 11226 . - . ID=gene-LDO45_RS08715;Name=LDO45_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08715;old_locus_tag=BDI4_1690012 NZ_CAJZAS010000078.1 Protein Homology CDS 10528 11226 . - 0 ID=cds-WP_006761414.1;Parent=gene-LDO45_RS08715;Dbxref=GenBank:WP_006761414.1;Name=WP_006761414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698250.1;locus_tag=LDO45_RS08715;product=Bax inhibitor-1/YccA family protein;protein_id=WP_006761414.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 11476 11901 . + . ID=gene-LDO45_RS08720;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=LDO45_RS08720;old_locus_tag=BDI4_1690014 NZ_CAJZAS010000078.1 Protein Homology CDS 11476 11901 . + 0 ID=cds-WP_006478674.1;Parent=gene-LDO45_RS08720;Dbxref=GenBank:WP_006478674.1;Name=WP_006478674.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012433533.1;locus_tag=LDO45_RS08720;product=nucleoside-diphosphate kinase;protein_id=WP_006478674.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 11957 13096 . + . ID=gene-LDO45_RS08725;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;locus_tag=LDO45_RS08725;old_locus_tag=BDI4_1690015 NZ_CAJZAS010000078.1 Protein Homology CDS 11957 13096 . + 0 ID=cds-WP_014896906.1;Parent=gene-LDO45_RS08725;Dbxref=GenBank:WP_014896906.1;Name=WP_014896906.1;Ontology_term=GO:0030488,GO:0070475,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=tRNA methylation|0030488||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012433532.1;locus_tag=LDO45_RS08725;product=23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN;protein_id=WP_014896906.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 13233 14258 . + . ID=gene-LDO45_RS08730;Name=LDO45_RS08730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08730;old_locus_tag=BDI4_1690016 NZ_CAJZAS010000078.1 Protein Homology CDS 13233 14258 . + 0 ID=cds-WP_059529926.1;Parent=gene-LDO45_RS08730;Dbxref=GenBank:WP_059529926.1;Name=WP_059529926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496411.1;locus_tag=LDO45_RS08730;product=helix-turn-helix domain-containing protein;protein_id=WP_059529926.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 14365 15669 . + . ID=gene-LDO45_RS08735;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=LDO45_RS08735;old_locus_tag=BDI4_1690017 NZ_CAJZAS010000078.1 Protein Homology CDS 14365 15669 . + 0 ID=cds-WP_027787235.1;Parent=gene-LDO45_RS08735;Dbxref=GenBank:WP_027787235.1;Name=WP_027787235.1;Ontology_term=GO:0044237,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=cellular metabolic process|0044237||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483314.1;locus_tag=LDO45_RS08735;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_027787235.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 15691 17031 . + . ID=gene-LDO45_RS08740;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=LDO45_RS08740;old_locus_tag=BDI4_1690018 NZ_CAJZAS010000078.1 Protein Homology CDS 15691 17031 . + 0 ID=cds-WP_044848982.1;Parent=gene-LDO45_RS08740;Dbxref=GenBank:WP_044848982.1;Name=WP_044848982.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764216.1;locus_tag=LDO45_RS08740;product=histidine--tRNA ligase;protein_id=WP_044848982.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 17087 17716 . + . ID=gene-LDO45_RS08745;Name=LDO45_RS08745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08745;old_locus_tag=BDI4_1690019 NZ_CAJZAS010000078.1 Protein Homology CDS 17087 17716 . + 0 ID=cds-WP_059529930.1;Parent=gene-LDO45_RS08745;Dbxref=GenBank:WP_059529930.1;Name=WP_059529930.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890825.1;locus_tag=LDO45_RS08745;product=tetratricopeptide repeat protein;protein_id=WP_059529930.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 17757 18902 . + . ID=gene-LDO45_RS08750;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=LDO45_RS08750;old_locus_tag=BDI4_1690020 NZ_CAJZAS010000078.1 Protein Homology CDS 17757 18902 . + 0 ID=cds-WP_059529933.1;Parent=gene-LDO45_RS08750;Dbxref=GenBank:WP_059529933.1;Name=WP_059529933.1;Ontology_term=GO:0005515,GO:0009279;gbkey=CDS;gene=bamB;go_component=cell outer membrane|0009279||IEA;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875493.1;locus_tag=LDO45_RS08750;product=outer membrane protein assembly factor BamB;protein_id=WP_059529933.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 19154 20491 . + . ID=gene-LDO45_RS08755;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=LDO45_RS08755;old_locus_tag=BDI4_1690022 NZ_CAJZAS010000078.1 Protein Homology CDS 19154 20491 . + 0 ID=cds-WP_044848985.1;Parent=gene-LDO45_RS08755;Dbxref=GenBank:WP_044848985.1;Name=WP_044848985.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006051314.1;locus_tag=LDO45_RS08755;product=ribosome biogenesis GTPase Der;protein_id=WP_044848985.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 20633 20872 . + . ID=gene-LDO45_RS08760;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=LDO45_RS08760;old_locus_tag=BDI4_1690023 NZ_CAJZAS010000078.1 Protein Homology CDS 20633 20872 . + 0 ID=cds-WP_006399927.1;Parent=gene-LDO45_RS08760;Dbxref=GenBank:WP_006399927.1;Name=WP_006399927.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399927.1;locus_tag=LDO45_RS08760;product=RNA chaperone Hfq;protein_id=WP_006399927.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 20945 22120 . + . ID=gene-LDO45_RS08765;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=LDO45_RS08765;old_locus_tag=BDI4_1690024 NZ_CAJZAS010000078.1 Protein Homology CDS 20945 22120 . + 0 ID=cds-WP_174908897.1;Parent=gene-LDO45_RS08765;Dbxref=GenBank:WP_174908897.1;Name=WP_174908897.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521337.1;locus_tag=LDO45_RS08765;product=GTPase HflX;protein_id=WP_174908897.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 22168 23517 . + . ID=gene-LDO45_RS08770;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=LDO45_RS08770;old_locus_tag=BDI4_1690025 NZ_CAJZAS010000078.1 Protein Homology CDS 22168 23517 . + 0 ID=cds-WP_059817520.1;Parent=gene-LDO45_RS08770;Dbxref=GenBank:WP_059817520.1;Name=WP_059817520.1;Ontology_term=GO:0045861,GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;go_process=negative regulation of proteolysis|0045861||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493684.1;locus_tag=LDO45_RS08770;product=FtsH protease activity modulator HflK;protein_id=WP_059817520.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 23533 24432 . + . ID=gene-LDO45_RS08775;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=LDO45_RS08775;old_locus_tag=BDI4_1690026 NZ_CAJZAS010000078.1 Protein Homology CDS 23533 24432 . + 0 ID=cds-WP_059529941.1;Parent=gene-LDO45_RS08775;Dbxref=GenBank:WP_059529941.1;Name=WP_059529941.1;Ontology_term=GO:0052547,GO:0016020,GO:0098797;gbkey=CDS;gene=hflC;go_component=membrane|0016020||IEA,plasma membrane protein complex|0098797||IEA;go_process=regulation of peptidase activity|0052547||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896916.1;locus_tag=LDO45_RS08775;product=protease modulator HflC;protein_id=WP_059529941.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 24470 24661 . + . ID=gene-LDO45_RS08780;Name=LDO45_RS08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08780;old_locus_tag=BDI4_1690027 NZ_CAJZAS010000078.1 Protein Homology CDS 24470 24661 . + 0 ID=cds-WP_009687995.1;Parent=gene-LDO45_RS08780;Dbxref=GenBank:WP_009687995.1;Name=WP_009687995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009973312.1;locus_tag=LDO45_RS08780;product=DUF2065 domain-containing protein;protein_id=WP_009687995.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 24763 25911 . + . ID=gene-LDO45_RS08785;Name=LDO45_RS08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08785;old_locus_tag=BDI4_1690028 NZ_CAJZAS010000078.1 Protein Homology CDS 24763 25911 . + 0 ID=cds-WP_059693226.1;Parent=gene-LDO45_RS08785;Dbxref=GenBank:WP_059693226.1;Name=WP_059693226.1;Ontology_term=GO:0000105;gbkey=CDS;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192327.1;locus_tag=LDO45_RS08785;product=ATP phosphoribosyltransferase regulatory subunit;protein_id=WP_059693226.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 26025 27371 . + . ID=gene-LDO45_RS08790;Name=LDO45_RS08790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08790;old_locus_tag=BDI4_1690029 NZ_CAJZAS010000078.1 Protein Homology CDS 26025 27371 . + 0 ID=cds-WP_059693224.1;Parent=gene-LDO45_RS08790;Dbxref=GenBank:WP_059693224.1;Name=WP_059693224.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193462.1;locus_tag=LDO45_RS08790;product=adenylosuccinate synthase;protein_id=WP_059693224.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 27380 27976 . + . ID=gene-LDO45_RS08795;Name=LDO45_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08795;old_locus_tag=BDI4_1690030 NZ_CAJZAS010000078.1 Protein Homology CDS 27380 27976 . + 0 ID=cds-WP_059464415.1;Parent=gene-LDO45_RS08795;Dbxref=GenBank:WP_059464415.1;Name=WP_059464415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478688.1;locus_tag=LDO45_RS08795;product=phosphoribosyltransferase;protein_id=WP_059464415.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 28251 30164 . + . ID=gene-LDO45_RS08800;Name=LDO45_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08800;old_locus_tag=BDI4_1690031 NZ_CAJZAS010000078.1 Protein Homology CDS 28251 30164 . + 0 ID=cds-WP_059693222.1;Parent=gene-LDO45_RS08800;Dbxref=GenBank:WP_059693222.1;Name=WP_059693222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478689.1;locus_tag=LDO45_RS08800;product=potassium transporter Kup;protein_id=WP_059693222.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 30277 32601 . - . ID=gene-LDO45_RS08805;Name=LDO45_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08805;old_locus_tag=BDI4_1690032 NZ_CAJZAS010000078.1 Protein Homology CDS 30277 32601 . - 0 ID=cds-WP_223961093.1;Parent=gene-LDO45_RS08805;Dbxref=GenBank:WP_223961093.1;Name=WP_223961093.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352249.1;locus_tag=LDO45_RS08805;product=Tex family protein;protein_id=WP_223961093.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 32762 33514 . + . ID=gene-LDO45_RS08810;Name=LDO45_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08810;old_locus_tag=BDI4_1690033 NZ_CAJZAS010000078.1 Protein Homology CDS 32762 33514 . + 0 ID=cds-WP_059698470.1;Parent=gene-LDO45_RS08810;Dbxref=GenBank:WP_059698470.1;Name=WP_059698470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478691.1;locus_tag=LDO45_RS08810;product=hypothetical protein;protein_id=WP_059698470.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 33592 33807 . + . ID=gene-LDO45_RS08815;Name=LDO45_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08815;old_locus_tag=BDI4_1690034 NZ_CAJZAS010000078.1 Protein Homology CDS 33592 33807 . + 0 ID=cds-WP_006755091.1;Parent=gene-LDO45_RS08815;Dbxref=GenBank:WP_006755091.1;Name=WP_006755091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010103275.1;locus_tag=LDO45_RS08815;product=YdcH family protein;protein_id=WP_006755091.1;transl_table=11 NZ_CAJZAS010000078.1 RefSeq gene 33863 36106 . + . ID=gene-LDO45_RS08820;Name=LDO45_RS08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08820;old_locus_tag=BDI4_1690035 NZ_CAJZAS010000078.1 Protein Homology CDS 33863 36106 . + 0 ID=cds-WP_059526051.1;Parent=gene-LDO45_RS08820;Dbxref=GenBank:WP_059526051.1;Name=WP_059526051.1;Ontology_term=GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493492.1;locus_tag=LDO45_RS08820;product=ATP-dependent DNA helicase;protein_id=WP_059526051.1;transl_table=11 ##sequence-region NZ_CAJZAS010000079.1 1 36077 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000079.1 RefSeq region 1 36077 . + . ID=NZ_CAJZAS010000079.1:1..36077;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_17 NZ_CAJZAS010000079.1 RefSeq gene 1 1003 . + . ID=gene-LDO45_RS08825;Name=LDO45_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08825;old_locus_tag=BDI4_170001;partial=true;start_range=.,1 NZ_CAJZAS010000079.1 Protein Homology CDS 1 1003 . + 1 ID=cds-WP_223961095.1;Parent=gene-LDO45_RS08825;Dbxref=GenBank:WP_223961095.1;Name=WP_223961095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879674.1;locus_tag=LDO45_RS08825;partial=true;product=thioredoxin family protein;protein_id=WP_223961095.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 1064 1807 . + . ID=gene-LDO45_RS08830;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=LDO45_RS08830;old_locus_tag=BDI4_170002 NZ_CAJZAS010000079.1 Protein Homology CDS 1064 1807 . + 0 ID=cds-WP_223961097.1;Parent=gene-LDO45_RS08830;Dbxref=GenBank:WP_223961097.1;Name=WP_223961097.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481493.1;locus_tag=LDO45_RS08830;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_223961097.1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 2053 3168 . + . ID=gene-LDO45_RS08835;Name=LDO45_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08835;old_locus_tag=BDI4_170003 NZ_CAJZAS010000079.1 Protein Homology CDS 2053 3168 . + 0 ID=cds-WP_059534449.1;Parent=gene-LDO45_RS08835;Dbxref=GenBank:WP_059534449.1;Name=WP_059534449.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545782.1;locus_tag=LDO45_RS08835;product=aromatic ring-hydroxylating dioxygenase subunit alpha;protein_id=WP_059534449.1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 3197 3586 . - . ID=gene-LDO45_RS08840;Name=LDO45_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08840;old_locus_tag=BDI4_170004 NZ_CAJZAS010000079.1 Protein Homology CDS 3197 3586 . - 0 ID=cds-WP_223961099.1;Parent=gene-LDO45_RS08840;Dbxref=GenBank:WP_223961099.1;Name=WP_223961099.1;Ontology_term=GO:0009972,GO:0004126,GO:0008270;gbkey=CDS;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=cytidine deamination|0009972||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485641.1;locus_tag=LDO45_RS08840;product=cytidine deaminase;protein_id=WP_223961099.1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 3714 5057 . - . ID=gene-LDO45_RS08845;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=LDO45_RS08845;old_locus_tag=BDI4_170005 NZ_CAJZAS010000079.1 Protein Homology CDS 3714 5057 . - 0 ID=cds-WP_223961101.1;Parent=gene-LDO45_RS08845;Dbxref=GenBank:WP_223961101.1;Name=WP_223961101.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337200.1;locus_tag=LDO45_RS08845;product=thymidine phosphorylase;protein_id=WP_223961101.1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 5078 6352 . - . ID=gene-LDO45_RS08850;Name=LDO45_RS08850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08850;old_locus_tag=BDI4_170006 NZ_CAJZAS010000079.1 Protein Homology CDS 5078 6352 . - 0 ID=cds-WP_059690276.1;Parent=gene-LDO45_RS08850;Dbxref=GenBank:WP_059690276.1;Name=WP_059690276.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485647.1;locus_tag=LDO45_RS08850;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_059690276.1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 6698 8155 . - . ID=gene-LDO45_RS08855;Name=hydA;gbkey=Gene;gene=hydA;gene_biotype=protein_coding;locus_tag=LDO45_RS08855;old_locus_tag=BDI4_170007 NZ_CAJZAS010000079.1 Protein Homology CDS 6698 8155 . - 0 ID=cds-WP_223961103.1;Parent=gene-LDO45_RS08855;Dbxref=GenBank:WP_223961103.1;Name=WP_223961103.1;Ontology_term=GO:0008152,GO:0004157,GO:0005737;gbkey=CDS;gene=hydA;go_component=cytoplasm|0005737||IEA;go_function=dihydropyrimidinase activity|0004157||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485639.1;locus_tag=LDO45_RS08855;product=dihydropyrimidinase;protein_id=WP_223961103.1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 8202 9710 . - . ID=gene-LDO45_RS08860;Name=LDO45_RS08860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08860;old_locus_tag=BDI4_170008 NZ_CAJZAS010000079.1 Protein Homology CDS 8202 9710 . - 0 ID=cds-WP_059690277.1;Parent=gene-LDO45_RS08860;Dbxref=GenBank:WP_059690277.1;Name=WP_059690277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753680.1;locus_tag=LDO45_RS08860;product=NCS1 family nucleobase:cation symporter-1;protein_id=WP_059690277.1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 9810 11117 . - . ID=gene-LDO45_RS08865;Name=preA;gbkey=Gene;gene=preA;gene_biotype=protein_coding;locus_tag=LDO45_RS08865;old_locus_tag=BDI4_170009 NZ_CAJZAS010000079.1 Protein Homology CDS 9810 11117 . - 0 ID=cds-WP_059534461.1;Parent=gene-LDO45_RS08865;Dbxref=GenBank:WP_059534461.1;Name=WP_059534461.1;Ontology_term=GO:0006210,GO:0006212,GO:0017113;gbkey=CDS;gene=preA;go_function=dihydropyrimidine dehydrogenase (NADP+) activity|0017113||IEA;go_process=thymine catabolic process|0006210||IEA,uracil catabolic process|0006212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335435.1;locus_tag=LDO45_RS08865;product=NAD-dependent dihydropyrimidine dehydrogenase subunit PreA;protein_id=WP_059534461.1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 11208 12545 . - . ID=gene-LDO45_RS08870;Name=LDO45_RS08870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08870;old_locus_tag=BDI4_170010 NZ_CAJZAS010000079.1 Protein Homology CDS 11208 12545 . - 0 ID=cds-WP_223961105.1;Parent=gene-LDO45_RS08870;Dbxref=GenBank:WP_223961105.1;Name=WP_223961105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725527.1;locus_tag=LDO45_RS08870;product=NAD(P)-dependent oxidoreductase;protein_id=WP_223961105.1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 12674 13954 . - . ID=gene-LDO45_RS08875;Name=LDO45_RS08875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08875;old_locus_tag=BDI4_170011 NZ_CAJZAS010000079.1 Protein Homology CDS 12674 13954 . - 0 ID=cds-WP_223961107.1;Parent=gene-LDO45_RS08875;Dbxref=GenBank:WP_223961107.1;Name=WP_223961107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065405.1;locus_tag=LDO45_RS08875;product=Zn-dependent hydrolase;protein_id=WP_223961107.1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 14317 15015 . + . ID=gene-LDO45_RS08880;Name=LDO45_RS08880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08880;old_locus_tag=BDI4_170012 NZ_CAJZAS010000079.1 Protein Homology CDS 14317 15015 . + 0 ID=cds-WP_223961109.1;Parent=gene-LDO45_RS08880;Dbxref=GenBank:WP_223961109.1;Name=WP_223961109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217798.1;locus_tag=LDO45_RS08880;product=TetR/AcrR family transcriptional regulator;protein_id=WP_223961109.1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 15051 16736 . - . ID=gene-LDO45_RS08885;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=LDO45_RS08885;old_locus_tag=BDI4_170013 NZ_CAJZAS010000079.1 Protein Homology CDS 15051 16736 . - 0 ID=cds-WP_223961111.1;Parent=gene-LDO45_RS08885;Dbxref=GenBank:WP_223961111.1;Name=WP_223961111.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009899903.1;locus_tag=LDO45_RS08885;product=choline dehydrogenase;protein_id=WP_223961111.1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 16777 18282 . - . ID=gene-LDO45_RS08890;Name=LDO45_RS08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08890;old_locus_tag=BDI4_170014 NZ_CAJZAS010000079.1 Protein Homology CDS 16777 18282 . - 0 ID=cds-WP_059698987.1;Parent=gene-LDO45_RS08890;Dbxref=GenBank:WP_059698987.1;Name=WP_059698987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007732335.1;locus_tag=LDO45_RS08890;product=cytosine permease;protein_id=WP_059698987.1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 18441 19949 . - . ID=gene-LDO45_RS08895;Name=LDO45_RS08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08895;old_locus_tag=BDI4_170016 NZ_CAJZAS010000079.1 Protein Homology CDS 18441 19949 . - 0 ID=cds-WP_223961113.1;Parent=gene-LDO45_RS08895;Dbxref=GenBank:WP_223961113.1;Name=WP_223961113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007584234.1;locus_tag=LDO45_RS08895;product=aldehyde dehydrogenase;protein_id=WP_223961113.1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 20063 21040 . - . ID=gene-LDO45_RS08900;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=LDO45_RS08900;old_locus_tag=BDI4_170017 NZ_CAJZAS010000079.1 Protein Homology CDS 20063 21040 . - 0 ID=cds-WP_059534472.1;Parent=gene-LDO45_RS08900;Dbxref=GenBank:WP_059534472.1;Name=WP_059534472.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006156571.1;locus_tag=LDO45_RS08900;product=agmatinase;protein_id=WP_059534472.1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 21201 22124 . + . ID=gene-LDO45_RS08905;Name=LDO45_RS08905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08905;old_locus_tag=BDI4_170018 NZ_CAJZAS010000079.1 Protein Homology CDS 21201 22124 . + 0 ID=cds-WP_124921612.1;Parent=gene-LDO45_RS08905;Dbxref=GenBank:WP_124921612.1;Name=WP_124921612.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007732328.1;locus_tag=LDO45_RS08905;product=LysR family transcriptional regulator;protein_id=WP_124921612.1;transl_table=11 NZ_CAJZAS010000079.1 cmsearch riboswitch 22317 22403 . + . ID=id-NZ_CAJZAS010000079.1:22317..22403;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAS010000079.1 RefSeq gene 22633 23007 . + . ID=gene-LDO45_RS08910;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=LDO45_RS08910;old_locus_tag=BDI4_170019 NZ_CAJZAS010000079.1 Protein Homology CDS 22633 23007 . + 0 ID=cds-WP_223961115.1;Parent=gene-LDO45_RS08910;Dbxref=GenBank:WP_223961115.1;Name=WP_223961115.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011482799.1;locus_tag=LDO45_RS08910;product=glycine cleavage system protein GcvH;protein_id=WP_223961115.1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 23004 25883 . + . ID=gene-LDO45_RS08915;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=LDO45_RS08915;old_locus_tag=BDI4_170020 NZ_CAJZAS010000079.1 Protein Homology CDS 23004 25883 . + 0 ID=cds-WP_374109524.1;Parent=gene-LDO45_RS08915;Dbxref=GenBank:WP_374109524.1;Name=WP_374109524.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019450401.1;locus_tag=LDO45_RS08915;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_374109524.1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 25977 27233 . + . ID=gene-LDO45_RS08920;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=LDO45_RS08920;old_locus_tag=BDI4_170021 NZ_CAJZAS010000079.1 Protein Homology CDS 25977 27233 . + 0 ID=cds-WP_059534479.1;Parent=gene-LDO45_RS08920;Dbxref=GenBank:WP_059534479.1;Name=WP_059534479.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013122464.1;locus_tag=LDO45_RS08920;product=serine hydroxymethyltransferase;protein_id=WP_059534479.1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 27396 28514 . + . ID=gene-LDO45_RS08925;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=LDO45_RS08925;old_locus_tag=BDI4_170022 NZ_CAJZAS010000079.1 Protein Homology CDS 27396 28514 . + 0 ID=cds-WP_223961119.1;Parent=gene-LDO45_RS08925;Dbxref=GenBank:WP_223961119.1;Name=WP_223961119.1;Ontology_term=GO:0006546,GO:0004047;gbkey=CDS;gene=gcvT;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013900792.1;locus_tag=LDO45_RS08925;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_223961119.1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 28518 29492 . + . ID=gene-LDO45_RS08930;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=LDO45_RS08930;old_locus_tag=BDI4_170023 NZ_CAJZAS010000079.1 Protein Homology CDS 28518 29492 . + 0 ID=cds-WP_374109525.1;Parent=gene-LDO45_RS08930;Dbxref=GenBank:WP_374109525.1;Name=WP_374109525.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016344099.1;locus_tag=LDO45_RS08930;product=lipoyl synthase;protein_id=WP_374109525.1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 29581 30771 . - . ID=gene-LDO45_RS08935;Name=LDO45_RS08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08935;old_locus_tag=BDI4_170024 NZ_CAJZAS010000079.1 Protein Homology CDS 29581 30771 . - 0 ID=cds-WP_059534484.1;Parent=gene-LDO45_RS08935;Dbxref=GenBank:WP_059534484.1;Name=WP_059534484.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660855.1;locus_tag=LDO45_RS08935;product=acetyl-CoA C-acetyltransferase;protein_id=WP_059534484.1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 30790 31557 . - . ID=gene-LDO45_RS08940;Name=LDO45_RS08940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08940;old_locus_tag=BDI4_170025 NZ_CAJZAS010000079.1 Protein Homology CDS 30790 31557 . - 0 ID=cds-WP_223961121.1;Parent=gene-LDO45_RS08940;Dbxref=GenBank:WP_223961121.1;Name=WP_223961121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483642.1;locus_tag=LDO45_RS08940;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_223961121.1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 31578 33251 . - . ID=gene-LDO45_RS08945;Name=LDO45_RS08945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08945;old_locus_tag=BDI4_170026 NZ_CAJZAS010000079.1 Protein Homology CDS 31578 33251 . - 0 ID=cds-WP_223961123.1;Parent=gene-LDO45_RS08945;Dbxref=GenBank:WP_223961123.1;Name=WP_223961123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372095.1;locus_tag=LDO45_RS08945;product=acyl-CoA synthetase;protein_id=WP_223961123.1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 33387 34391 . + . ID=gene-LDO45_RS08950;Name=LDO45_RS08950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08950;old_locus_tag=BDI4_170028 NZ_CAJZAS010000079.1 Protein Homology CDS 33387 34391 . + 0 ID=cds-WP_223961125.1;Parent=gene-LDO45_RS08950;Dbxref=GenBank:WP_223961125.1;Name=WP_223961125.1;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762734.1;locus_tag=LDO45_RS08950;product=AraC family transcriptional regulator;protein_id=WP_223961125.1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 34745 35344 . + . ID=gene-LDO45_RS08955;Name=LDO45_RS08955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08955;old_locus_tag=BDI4_170029 NZ_CAJZAS010000079.1 Protein Homology CDS 34745 35344 . + 0 ID=cds-WP_223961127.1;Parent=gene-LDO45_RS08955;Dbxref=GenBank:WP_223961127.1;Name=WP_223961127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331771.1;locus_tag=LDO45_RS08955;product=hypothetical protein;protein_id=WP_223961127.1;transl_table=11 NZ_CAJZAS010000079.1 RefSeq gene 35447 35818 . + . ID=gene-LDO45_RS08960;Name=LDO45_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08960;old_locus_tag=BDI4_170031 NZ_CAJZAS010000079.1 Protein Homology CDS 35447 35818 . + 0 ID=cds-WP_059690290.1;Parent=gene-LDO45_RS08960;Dbxref=GenBank:WP_059690290.1;Name=WP_059690290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372097.1;locus_tag=LDO45_RS08960;product=nuclear transport factor 2 family protein;protein_id=WP_059690290.1;transl_table=11 ##sequence-region NZ_CAJZAS010000080.1 1 1407 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000080.1 RefSeq region 1 1407 . + . ID=NZ_CAJZAS010000080.1:1..1407;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_170 NZ_CAJZAS010000080.1 RefSeq gene 1 430 . - . ID=gene-LDO45_RS08965;Name=LDO45_RS08965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08965;old_locus_tag=BDI4_1700002;partial=true;start_range=.,1 NZ_CAJZAS010000080.1 Protein Homology CDS 1 430 . - 0 ID=cds-WP_223961131.1;Parent=gene-LDO45_RS08965;Dbxref=GenBank:WP_223961131.1;Name=WP_223961131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491398.1;locus_tag=LDO45_RS08965;partial=true;product=manganese catalase family protein;protein_id=WP_223961131.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000080.1 RefSeq gene 626 925 . - . ID=gene-LDO45_RS08970;Name=LDO45_RS08970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08970 NZ_CAJZAS010000080.1 GeneMarkS-2+ CDS 626 925 . - 0 ID=cds-WP_179949201.1;Parent=gene-LDO45_RS08970;Dbxref=GenBank:WP_179949201.1;Name=WP_179949201.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS08970;product=hypothetical protein;protein_id=WP_179949201.1;transl_table=11 NZ_CAJZAS010000080.1 RefSeq gene 1263 1407 . + . ID=gene-LDO45_RS34510;Name=LDO45_RS34510;end_range=1407,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34510;partial=true;start_range=.,1263 NZ_CAJZAS010000080.1 Protein Homology CDS 1263 1407 . + 2 ID=cds-WP_223961133.1;Parent=gene-LDO45_RS34510;Dbxref=GenBank:WP_223961133.1;Name=WP_223961133.1;end_range=1407,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498259.1;locus_tag=LDO45_RS34510;partial=true;product=biotin/lipoyl-binding protein;protein_id=WP_223961133.1;start_range=.,1263;transl_table=11 ##sequence-region NZ_CAJZAS010000081.1 1 1147 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000081.1 RefSeq region 1 1147 . + . ID=NZ_CAJZAS010000081.1:1..1147;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_171 NZ_CAJZAS010000081.1 RefSeq pseudogene 1 362 . - . ID=gene-LDO45_RS08980;Name=LDO45_RS08980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS08980;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000081.1 Protein Homology CDS 1 362 . - 0 ID=cds-LDO45_RS08980;Parent=gene-LDO45_RS08980;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212554.1;locus_tag=LDO45_RS08980;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000081.1 RefSeq pseudogene 562 1147 . + . ID=gene-LDO45_RS08985;Name=LDO45_RS08985;end_range=1147,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS08985;partial=true;pseudo=true NZ_CAJZAS010000081.1 Protein Homology CDS 562 1147 . + 0 ID=cds-LDO45_RS08985;Parent=gene-LDO45_RS08985;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing C-terminus;Ontology_term=GO:0010124;end_range=1147,.;gbkey=CDS;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023750.1;locus_tag=LDO45_RS08985;partial=true;product=Phenylacetic acid catabolic protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000082.1 1 14520 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000082.1 RefSeq region 1 14520 . + . ID=NZ_CAJZAS010000082.1:1..14520;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_172 NZ_CAJZAS010000082.1 RefSeq pseudogene 1 1356 . - . ID=gene-LDO45_RS08990;Name=LDO45_RS08990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS08990;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000082.1 Protein Homology CDS 1 1356 . - 0 ID=cds-LDO45_RS08990;Parent=gene-LDO45_RS08990;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing C-terminus;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758862.1;locus_tag=LDO45_RS08990;partial=true;product=TolC family protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000082.1 RefSeq gene 1365 2303 . - . ID=gene-LDO45_RS08995;Name=LDO45_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS08995;old_locus_tag=BDI4_1720003 NZ_CAJZAS010000082.1 Protein Homology CDS 1365 2303 . - 0 ID=cds-WP_223961135.1;Parent=gene-LDO45_RS08995;Dbxref=GenBank:WP_223961135.1;Name=WP_223961135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758863.1;locus_tag=LDO45_RS08995;product=glycosyltransferase family 2 protein;protein_id=WP_223961135.1;transl_table=11 NZ_CAJZAS010000082.1 RefSeq gene 2314 3900 . - . ID=gene-LDO45_RS09000;Name=LDO45_RS09000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09000;old_locus_tag=BDI4_1720004 NZ_CAJZAS010000082.1 Protein Homology CDS 2314 3900 . - 0 ID=cds-WP_223961137.1;Parent=gene-LDO45_RS09000;Dbxref=GenBank:WP_223961137.1;Name=WP_223961137.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898520.1;locus_tag=LDO45_RS09000;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_223961137.1;transl_table=11 NZ_CAJZAS010000082.1 RefSeq gene 3897 5180 . - . ID=gene-LDO45_RS09005;Name=LDO45_RS09005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09005;old_locus_tag=BDI4_1720005 NZ_CAJZAS010000082.1 Protein Homology CDS 3897 5180 . - 0 ID=cds-WP_223961139.1;Parent=gene-LDO45_RS09005;Dbxref=GenBank:WP_223961139.1;Name=WP_223961139.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498733.1;locus_tag=LDO45_RS09005;product=glycosyltransferase;protein_id=WP_223961139.1;transl_table=11 NZ_CAJZAS010000082.1 RefSeq gene 5198 5767 . - . ID=gene-LDO45_RS09010;Name=LDO45_RS09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09010;old_locus_tag=BDI4_1720006 NZ_CAJZAS010000082.1 Protein Homology CDS 5198 5767 . - 0 ID=cds-WP_059692019.1;Parent=gene-LDO45_RS09010;Dbxref=GenBank:WP_059692019.1;Name=WP_059692019.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898518.1;locus_tag=LDO45_RS09010;product=isoprenylcysteine carboxylmethyltransferase family protein;protein_id=WP_059692019.1;transl_table=11 NZ_CAJZAS010000082.1 RefSeq gene 5835 6737 . - . ID=gene-LDO45_RS09015;Name=LDO45_RS09015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09015;old_locus_tag=BDI4_1720007 NZ_CAJZAS010000082.1 Protein Homology CDS 5835 6737 . - 0 ID=cds-WP_223961141.1;Parent=gene-LDO45_RS09015;Dbxref=GenBank:WP_223961141.1;Name=WP_223961141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659480.1;locus_tag=LDO45_RS09015;product=alpha/beta fold hydrolase;protein_id=WP_223961141.1;transl_table=11 NZ_CAJZAS010000082.1 RefSeq gene 7459 8043 . + . ID=gene-LDO45_RS09020;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=LDO45_RS09020;old_locus_tag=BDI4_1720011 NZ_CAJZAS010000082.1 Protein Homology CDS 7459 8043 . + 0 ID=cds-WP_059534154.1;Parent=gene-LDO45_RS09020;Dbxref=GenBank:WP_059534154.1;Name=WP_059534154.1;Ontology_term=GO:0003677;gbkey=CDS;gene=betI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331398.1;locus_tag=LDO45_RS09020;product=transcriptional regulator BetI;protein_id=WP_059534154.1;transl_table=11 NZ_CAJZAS010000082.1 RefSeq gene 8076 9545 . + . ID=gene-LDO45_RS09025;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=LDO45_RS09025;old_locus_tag=BDI4_1720012 NZ_CAJZAS010000082.1 Protein Homology CDS 8076 9545 . + 0 ID=cds-WP_223961142.1;Parent=gene-LDO45_RS09025;Dbxref=GenBank:WP_223961142.1;Name=WP_223961142.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533333.1;locus_tag=LDO45_RS09025;product=betaine-aldehyde dehydrogenase;protein_id=WP_223961142.1;transl_table=11 NZ_CAJZAS010000082.1 RefSeq gene 9568 11268 . + . ID=gene-LDO45_RS09030;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=LDO45_RS09030;old_locus_tag=BDI4_1720013 NZ_CAJZAS010000082.1 Protein Homology CDS 9568 11268 . + 0 ID=cds-WP_059692016.1;Parent=gene-LDO45_RS09030;Dbxref=GenBank:WP_059692016.1;Name=WP_059692016.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406015.1;locus_tag=LDO45_RS09030;product=choline dehydrogenase;protein_id=WP_059692016.1;transl_table=11 NZ_CAJZAS010000082.1 RefSeq pseudogene 11328 11622 . - . ID=gene-LDO45_RS09035;Name=LDO45_RS09035;end_range=11622,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS09035;old_locus_tag=BDI4_1720014;partial=true;pseudo=true NZ_CAJZAS010000082.1 Protein Homology CDS 11328 11622 . - 0 ID=cds-LDO45_RS09035;Parent=gene-LDO45_RS09035;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=11622,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548482.1;locus_tag=LDO45_RS09035;partial=true;product=IS481 family transposase;pseudo=true;transl_table=11 NZ_CAJZAS010000082.1 RefSeq gene 11621 12055 . - . ID=gene-LDO45_RS09040;Name=LDO45_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09040 NZ_CAJZAS010000082.1 Protein Homology CDS 11621 12055 . - 0 ID=cds-WP_223961151.1;Parent=gene-LDO45_RS09040;Dbxref=GenBank:WP_223961151.1;Name=WP_223961151.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03696.1;locus_tag=LDO45_RS09040;product=RHS repeat-associated core domain-containing protein;protein_id=WP_223961151.1;transl_table=11 NZ_CAJZAS010000082.1 RefSeq gene 12084 12476 . - . ID=gene-LDO45_RS09045;Name=LDO45_RS09045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09045;old_locus_tag=BDI4_1720016 NZ_CAJZAS010000082.1 GeneMarkS-2+ CDS 12084 12476 . - 0 ID=cds-WP_223961144.1;Parent=gene-LDO45_RS09045;Dbxref=GenBank:WP_223961144.1;Name=WP_223961144.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS09045;product=hypothetical protein;protein_id=WP_223961144.1;transl_table=11 NZ_CAJZAS010000082.1 RefSeq gene 13039 13434 . - . ID=gene-LDO45_RS09050;Name=LDO45_RS09050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09050 NZ_CAJZAS010000082.1 GeneMarkS-2+ CDS 13039 13434 . - 0 ID=cds-WP_223961146.1;Parent=gene-LDO45_RS09050;Dbxref=GenBank:WP_223961146.1;Name=WP_223961146.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS09050;product=hypothetical protein;protein_id=WP_223961146.1;transl_table=11 NZ_CAJZAS010000082.1 RefSeq gene 13437 13673 . - . ID=gene-LDO45_RS09055;Name=LDO45_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09055;old_locus_tag=BDI4_1720018 NZ_CAJZAS010000082.1 GeneMarkS-2+ CDS 13437 13673 . - 0 ID=cds-WP_223961148.1;Parent=gene-LDO45_RS09055;Dbxref=GenBank:WP_223961148.1;Name=WP_223961148.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS09055;product=hypothetical protein;protein_id=WP_223961148.1;transl_table=11 NZ_CAJZAS010000082.1 RefSeq gene 13812 14520 . - . ID=gene-LDO45_RS09060;Name=LDO45_RS09060;end_range=14520,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09060;old_locus_tag=BDI4_1720019;partial=true NZ_CAJZAS010000082.1 Protein Homology CDS 13812 14520 . - 1 ID=cds-WP_223961149.1;Parent=gene-LDO45_RS09060;Dbxref=GenBank:WP_223961149.1;Name=WP_223961149.1;end_range=14520,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700163.1;locus_tag=LDO45_RS09060;partial=true;product=RHS repeat-associated core domain-containing protein;protein_id=WP_223961149.1;transl_table=11 ##sequence-region NZ_CAJZAS010000083.1 1 12267 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000083.1 RefSeq region 1 12267 . + . ID=NZ_CAJZAS010000083.1:1..12267;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_173 NZ_CAJZAS010000083.1 RefSeq gene 1 1233 . - . ID=gene-LDO45_RS09065;Name=LDO45_RS09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09065;partial=true;start_range=.,1 NZ_CAJZAS010000083.1 Protein Homology CDS 1 1233 . - 0 ID=cds-WP_223961152.1;Parent=gene-LDO45_RS09065;Dbxref=GenBank:WP_223961152.1;Name=WP_223961152.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355135.1;locus_tag=LDO45_RS09065;partial=true;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_223961152.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000083.1 RefSeq gene 1241 2290 . - . ID=gene-LDO45_RS09070;Name=LDO45_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09070;old_locus_tag=BDI4_1730002 NZ_CAJZAS010000083.1 Protein Homology CDS 1241 2290 . - 0 ID=cds-WP_223961153.1;Parent=gene-LDO45_RS09070;Dbxref=GenBank:WP_223961153.1;Name=WP_223961153.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754408.1;locus_tag=LDO45_RS09070;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_223961153.1;transl_table=11 NZ_CAJZAS010000083.1 RefSeq gene 2329 3270 . - . ID=gene-LDO45_RS09075;Name=LDO45_RS09075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09075;old_locus_tag=BDI4_1730003 NZ_CAJZAS010000083.1 Protein Homology CDS 2329 3270 . - 0 ID=cds-WP_059525535.1;Parent=gene-LDO45_RS09075;Dbxref=GenBank:WP_059525535.1;Name=WP_059525535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899327.1;locus_tag=LDO45_RS09075;product=ABC transporter substrate-binding protein;protein_id=WP_059525535.1;transl_table=11 NZ_CAJZAS010000083.1 RefSeq gene 3334 3894 . - . ID=gene-LDO45_RS09080;Name=LDO45_RS09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09080;old_locus_tag=BDI4_1730004 NZ_CAJZAS010000083.1 Protein Homology CDS 3334 3894 . - 0 ID=cds-WP_059525532.1;Parent=gene-LDO45_RS09080;Dbxref=GenBank:WP_059525532.1;Name=WP_059525532.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413127.1;locus_tag=LDO45_RS09080;product=GNAT family N-acetyltransferase;protein_id=WP_059525532.1;transl_table=11 NZ_CAJZAS010000083.1 RefSeq gene 4168 5202 . - . ID=gene-LDO45_RS09085;Name=LDO45_RS09085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09085;old_locus_tag=BDI4_1730006 NZ_CAJZAS010000083.1 Protein Homology CDS 4168 5202 . - 0 ID=cds-WP_223961155.1;Parent=gene-LDO45_RS09085;Dbxref=GenBank:WP_223961155.1;Name=WP_223961155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882262.1;locus_tag=LDO45_RS09085;product=succinylglutamate desuccinylase/aspartoacylase family protein;protein_id=WP_223961155.1;transl_table=11 NZ_CAJZAS010000083.1 RefSeq gene 5434 5709 . - . ID=gene-LDO45_RS09090;Name=LDO45_RS09090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09090;old_locus_tag=BDI4_1730007 NZ_CAJZAS010000083.1 Protein Homology CDS 5434 5709 . - 0 ID=cds-WP_059525528.1;Parent=gene-LDO45_RS09090;Dbxref=GenBank:WP_059525528.1;Name=WP_059525528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413125.1;locus_tag=LDO45_RS09090;product=hypothetical protein;protein_id=WP_059525528.1;transl_table=11 NZ_CAJZAS010000083.1 RefSeq gene 5978 7528 . - . ID=gene-LDO45_RS09095;Name=LDO45_RS09095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09095;old_locus_tag=BDI4_1730008 NZ_CAJZAS010000083.1 Protein Homology CDS 5978 7528 . - 0 ID=cds-WP_223961158.1;Parent=gene-LDO45_RS09095;Dbxref=GenBank:WP_223961158.1;Name=WP_223961158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658860.1;locus_tag=LDO45_RS09095;product=diguanylate cyclase domain-containing protein;protein_id=WP_223961158.1;transl_table=11 NZ_CAJZAS010000083.1 RefSeq gene 8019 10895 . + . ID=gene-LDO45_RS09100;Name=LDO45_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09100;old_locus_tag=BDI4_1730009 NZ_CAJZAS010000083.1 Protein Homology CDS 8019 10895 . + 0 ID=cds-WP_223961160.1;Parent=gene-LDO45_RS09100;Dbxref=GenBank:WP_223961160.1;Name=WP_223961160.1;Ontology_term=GO:0043546;gbkey=CDS;go_function=molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694739.1;locus_tag=LDO45_RS09100;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;protein_id=WP_223961160.1;transl_table=11 NZ_CAJZAS010000083.1 RefSeq gene 10892 11578 . + . ID=gene-LDO45_RS09105;Name=LDO45_RS09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09105;old_locus_tag=BDI4_1730010 NZ_CAJZAS010000083.1 Protein Homology CDS 10892 11578 . + 0 ID=cds-WP_223961162.1;Parent=gene-LDO45_RS09105;Dbxref=GenBank:WP_223961162.1;Name=WP_223961162.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216972.1;locus_tag=LDO45_RS09105;product=(2Fe-2S)-binding protein;protein_id=WP_223961162.1;transl_table=11 NZ_CAJZAS010000083.1 RefSeq gene 11575 12267 . + . ID=gene-LDO45_RS09110;Name=LDO45_RS09110;end_range=12267,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09110;partial=true NZ_CAJZAS010000083.1 Protein Homology CDS 11575 12267 . + 0 ID=cds-WP_223961164.1;Parent=gene-LDO45_RS09110;Dbxref=GenBank:WP_223961164.1;Name=WP_223961164.1;end_range=12267,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339955.1;locus_tag=LDO45_RS09110;partial=true;product=c-type cytochrome;protein_id=WP_223961164.1;transl_table=11 ##sequence-region NZ_CAJZAS010000084.1 1 12107 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000084.1 RefSeq region 1 12107 . + . ID=NZ_CAJZAS010000084.1:1..12107;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_174 NZ_CAJZAS010000084.1 RefSeq gene 1 692 . + . ID=gene-LDO45_RS09115;Name=LDO45_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09115;partial=true;start_range=.,1 NZ_CAJZAS010000084.1 Protein Homology CDS 1 692 . + 2 ID=cds-WP_223961166.1;Parent=gene-LDO45_RS09115;Dbxref=GenBank:WP_223961166.1;Name=WP_223961166.1;Ontology_term=GO:0009236,GO:0015420,GO:0048472;gbkey=CDS;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA,threonine-phosphate decarboxylase activity|0048472||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352897.1;locus_tag=LDO45_RS09115;partial=true;product=CobD/CbiB family cobalamin biosynthesis protein;protein_id=WP_223961166.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000084.1 RefSeq gene 685 1704 . + . ID=gene-LDO45_RS09120;Name=cobD;gbkey=Gene;gene=cobD;gene_biotype=protein_coding;locus_tag=LDO45_RS09120;old_locus_tag=BDI4_1740002 NZ_CAJZAS010000084.1 Protein Homology CDS 685 1704 . + 0 ID=cds-WP_223961168.1;Parent=gene-LDO45_RS09120;Dbxref=GenBank:WP_223961168.1;Name=WP_223961168.1;Ontology_term=GO:0009236,GO:0003824;gbkey=CDS;gene=cobD;go_function=catalytic activity|0003824||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329017.1;locus_tag=LDO45_RS09120;product=threonine-phosphate decarboxylase CobD;protein_id=WP_223961168.1;transl_table=11 NZ_CAJZAS010000084.1 RefSeq gene 1701 2618 . + . ID=gene-LDO45_RS09125;Name=LDO45_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09125;old_locus_tag=BDI4_1740003 NZ_CAJZAS010000084.1 Protein Homology CDS 1701 2618 . + 0 ID=cds-WP_223961170.1;Parent=gene-LDO45_RS09125;Dbxref=GenBank:WP_223961170.1;Name=WP_223961170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545969.1;locus_tag=LDO45_RS09125;product=cobalamin-binding protein;protein_id=WP_223961170.1;transl_table=11 NZ_CAJZAS010000084.1 RefSeq gene 2666 3250 . - . ID=gene-LDO45_RS09130;Name=cobC;gbkey=Gene;gene=cobC;gene_biotype=protein_coding;locus_tag=LDO45_RS09130;old_locus_tag=BDI4_1740004 NZ_CAJZAS010000084.1 Protein Homology CDS 2666 3250 . - 0 ID=cds-WP_223961171.1;Parent=gene-LDO45_RS09130;Dbxref=GenBank:WP_223961171.1;Name=WP_223961171.1;Ontology_term=GO:0009236,GO:0043755;gbkey=CDS;gene=cobC;go_function=alpha-ribazole phosphatase activity|0043755||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484442.1;locus_tag=LDO45_RS09130;product=alpha-ribazole phosphatase;protein_id=WP_223961171.1;transl_table=11 NZ_CAJZAS010000084.1 RefSeq gene 3235 4011 . - . ID=gene-LDO45_RS09135;Name=LDO45_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09135;old_locus_tag=BDI4_1740005 NZ_CAJZAS010000084.1 Protein Homology CDS 3235 4011 . - 0 ID=cds-WP_223961173.1;Parent=gene-LDO45_RS09135;Dbxref=GenBank:WP_223961173.1;Name=WP_223961173.1;Ontology_term=GO:0051073;gbkey=CDS;go_function=adenosylcobinamide-GDP ribazoletransferase activity|0051073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478096.1;locus_tag=LDO45_RS09135;product=adenosylcobinamide-GDP ribazoletransferase;protein_id=WP_223961173.1;transl_table=11 NZ_CAJZAS010000084.1 RefSeq gene 4001 5056 . - . ID=gene-LDO45_RS09140;Name=cobT;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=LDO45_RS09140;old_locus_tag=BDI4_1740006 NZ_CAJZAS010000084.1 Protein Homology CDS 4001 5056 . - 0 ID=cds-WP_223961175.1;Parent=gene-LDO45_RS09140;Dbxref=GenBank:WP_223961175.1;Name=WP_223961175.1;Ontology_term=GO:0009236,GO:0008939;gbkey=CDS;gene=cobT;go_function=nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity|0008939||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694361.1;locus_tag=LDO45_RS09140;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=WP_223961175.1;transl_table=11 NZ_CAJZAS010000084.1 RefSeq gene 5109 5921 . - . ID=gene-LDO45_RS09145;Name=LDO45_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09145;old_locus_tag=BDI4_1740007 NZ_CAJZAS010000084.1 Protein Homology CDS 5109 5921 . - 0 ID=cds-WP_223961177.1;Parent=gene-LDO45_RS09145;Dbxref=GenBank:WP_223961177.1;Name=WP_223961177.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761137.1;locus_tag=LDO45_RS09145;product=ABC transporter ATP-binding protein;protein_id=WP_223961177.1;transl_table=11 NZ_CAJZAS010000084.1 RefSeq gene 5918 6916 . - . ID=gene-LDO45_RS09150;Name=LDO45_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09150;old_locus_tag=BDI4_1740008 NZ_CAJZAS010000084.1 Protein Homology CDS 5918 6916 . - 0 ID=cds-WP_223961179.1;Parent=gene-LDO45_RS09150;Dbxref=GenBank:WP_223961179.1;Name=WP_223961179.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493438.1;locus_tag=LDO45_RS09150;product=iron ABC transporter permease;protein_id=WP_223961179.1;transl_table=11 NZ_CAJZAS010000084.1 cmsearch riboswitch 7606 7859 . - . ID=id-NZ_CAJZAS010000084.1:7606..7859;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAS010000084.1 RefSeq gene 8036 8386 . + . ID=gene-LDO45_RS09155;Name=LDO45_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09155;old_locus_tag=BDI4_1740010 NZ_CAJZAS010000084.1 Protein Homology CDS 8036 8386 . + 0 ID=cds-WP_059527607.1;Parent=gene-LDO45_RS09155;Dbxref=GenBank:WP_059527607.1;Name=WP_059527607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600179.1;locus_tag=LDO45_RS09155;product=hypothetical protein;protein_id=WP_059527607.1;transl_table=11 NZ_CAJZAS010000084.1 RefSeq gene 8383 8697 . + . ID=gene-LDO45_RS09160;Name=LDO45_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09160;old_locus_tag=BDI4_1740011 NZ_CAJZAS010000084.1 Protein Homology CDS 8383 8697 . + 0 ID=cds-WP_011885730.1;Parent=gene-LDO45_RS09160;Dbxref=GenBank:WP_011885730.1;Name=WP_011885730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024874.1;locus_tag=LDO45_RS09160;product=cell division protein ZapA;protein_id=WP_011885730.1;transl_table=11 NZ_CAJZAS010000084.1 RefSeq gene 8778 8959 . + . ID=gene-LDO45_RS09165;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=LDO45_RS09165;old_locus_tag=BDI4_MISCRNA53 NZ_CAJZAS010000084.1 cmsearch ncRNA 8778 8959 . + . ID=rna-LDO45_RS09165;Parent=gene-LDO45_RS09165;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO45_RS09165;product=6S RNA NZ_CAJZAS010000084.1 cmsearch exon 8778 8959 . + . ID=exon-LDO45_RS09165-1;Parent=rna-LDO45_RS09165;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO45_RS09165;product=6S RNA NZ_CAJZAS010000084.1 RefSeq gene 9068 9529 . + . ID=gene-LDO45_RS09170;Name=LDO45_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09170;old_locus_tag=BDI4_1740013 NZ_CAJZAS010000084.1 Protein Homology CDS 9068 9529 . + 0 ID=cds-WP_059527611.1;Parent=gene-LDO45_RS09170;Dbxref=GenBank:WP_059527611.1;Name=WP_059527611.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602326.1;locus_tag=LDO45_RS09170;product=EVE domain-containing protein;protein_id=WP_059527611.1;transl_table=11 NZ_CAJZAS010000084.1 RefSeq gene 9748 10488 . + . ID=gene-LDO45_RS09175;Name=LDO45_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09175;old_locus_tag=BDI4_1740014 NZ_CAJZAS010000084.1 Protein Homology CDS 9748 10488 . + 0 ID=cds-WP_223961181.1;Parent=gene-LDO45_RS09175;Dbxref=GenBank:WP_223961181.1;Name=WP_223961181.1;Note=The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26%2C from Brucella%2C was shown to assemble into a channel-like structure%2C while YggE from E. coli has been associated with resistance to oxidative stress.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750009.1;locus_tag=LDO45_RS09175;product=SIMPL domain-containing protein;protein_id=WP_223961181.1;transl_table=11 NZ_CAJZAS010000084.1 RefSeq gene 10644 11534 . - . ID=gene-LDO45_RS09180;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=LDO45_RS09180;old_locus_tag=BDI4_1740015 NZ_CAJZAS010000084.1 Protein Homology CDS 10644 11534 . - 0 ID=cds-WP_223961183.1;Parent=gene-LDO45_RS09180;Dbxref=GenBank:WP_223961183.1;Name=WP_223961183.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657673.1;locus_tag=LDO45_RS09180;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_223961183.1;transl_table=11 NZ_CAJZAS010000084.1 RefSeq gene 11624 12107 . - . ID=gene-LDO45_RS09185;Name=LDO45_RS09185;end_range=12107,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09185;old_locus_tag=BDI4_1740016;partial=true NZ_CAJZAS010000084.1 Protein Homology CDS 11624 12107 . - 1 ID=cds-WP_253074731.1;Parent=gene-LDO45_RS09185;Dbxref=GenBank:WP_253074731.1;Name=WP_253074731.1;end_range=12107,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329026.1;locus_tag=LDO45_RS09185;partial=true;product=LysR substrate-binding domain-containing protein;protein_id=WP_253074731.1;transl_table=11 ##sequence-region NZ_CAJZAS010000085.1 1 8752 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000085.1 RefSeq region 1 8752 . + . ID=NZ_CAJZAS010000085.1:1..8752;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_175 NZ_CAJZAS010000085.1 RefSeq gene 1 2364 . + . ID=gene-LDO45_RS09190;Name=LDO45_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09190;old_locus_tag=BDI4_1750001;partial=true;start_range=.,1 NZ_CAJZAS010000085.1 Protein Homology CDS 1 2364 . + 0 ID=cds-WP_223961185.1;Parent=gene-LDO45_RS09190;Dbxref=GenBank:WP_223961185.1;Name=WP_223961185.1;Ontology_term=GO:0006812,GO:0042625,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled ion transmembrane transporter activity|0042625||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408114.1;locus_tag=LDO45_RS09190;partial=true;product=heavy metal translocating P-type ATPase;protein_id=WP_223961185.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000085.1 RefSeq gene 2375 2731 . + . ID=gene-LDO45_RS09195;Name=LDO45_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09195;old_locus_tag=BDI4_1750002 NZ_CAJZAS010000085.1 Protein Homology CDS 2375 2731 . + 0 ID=cds-WP_223961187.1;Parent=gene-LDO45_RS09195;Dbxref=GenBank:WP_223961187.1;Name=WP_223961187.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754013.1;locus_tag=LDO45_RS09195;product=zinc ribbon domain-containing protein;protein_id=WP_223961187.1;transl_table=11 NZ_CAJZAS010000085.1 RefSeq gene 2824 3702 . - . ID=gene-LDO45_RS09200;Name=LDO45_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09200;old_locus_tag=BDI4_1750003 NZ_CAJZAS010000085.1 Protein Homology CDS 2824 3702 . - 0 ID=cds-WP_059699607.1;Parent=gene-LDO45_RS09200;Dbxref=GenBank:WP_059699607.1;Name=WP_059699607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895518.1;locus_tag=LDO45_RS09200;product=GyrI-like domain-containing protein;protein_id=WP_059699607.1;transl_table=11 NZ_CAJZAS010000085.1 RefSeq gene 3978 5450 . + . ID=gene-LDO45_RS09205;Name=LDO45_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09205;old_locus_tag=BDI4_1750004 NZ_CAJZAS010000085.1 Protein Homology CDS 3978 5450 . + 0 ID=cds-WP_059531158.1;Parent=gene-LDO45_RS09205;Dbxref=GenBank:WP_059531158.1;Name=WP_059531158.1;Ontology_term=GO:0055085,GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401442.1;locus_tag=LDO45_RS09205;product=mechanosensitive ion channel;protein_id=WP_059531158.1;transl_table=11 NZ_CAJZAS010000085.1 RefSeq gene 5644 7056 . + . ID=gene-LDO45_RS09210;Name=eat;gbkey=Gene;gene=eat;gene_biotype=protein_coding;locus_tag=LDO45_RS09210;old_locus_tag=BDI4_1750005 NZ_CAJZAS010000085.1 Protein Homology CDS 5644 7056 . + 0 ID=cds-WP_223961189.1;Parent=gene-LDO45_RS09210;Dbxref=GenBank:WP_223961189.1;Name=WP_223961189.1;Ontology_term=GO:0006865,GO:0015171,GO:0016020;gbkey=CDS;gene=eat;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195858.1;locus_tag=LDO45_RS09210;product=ethanolamine permease;protein_id=WP_223961189.1;transl_table=11 NZ_CAJZAS010000085.1 RefSeq gene 7163 8560 . + . ID=gene-LDO45_RS09215;Name=LDO45_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09215;old_locus_tag=BDI4_1750006 NZ_CAJZAS010000085.1 Protein Homology CDS 7163 8560 . + 0 ID=cds-WP_059816435.1;Parent=gene-LDO45_RS09215;Dbxref=GenBank:WP_059816435.1;Name=WP_059816435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762947.1;locus_tag=LDO45_RS09215;product=ethanolamine ammonia-lyase subunit EutB;protein_id=WP_059816435.1;transl_table=11 NZ_CAJZAS010000085.1 RefSeq gene 8452 8752 . + . ID=gene-LDO45_RS09220;Name=LDO45_RS09220;end_range=8752,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09220;partial=true NZ_CAJZAS010000085.1 Protein Homology CDS 8452 8752 . + 0 ID=cds-WP_223961191.1;Parent=gene-LDO45_RS09220;Dbxref=GenBank:WP_223961191.1;Name=WP_223961191.1;Ontology_term=GO:0006520,GO:0008851;end_range=8752,.;gbkey=CDS;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762946.1;locus_tag=LDO45_RS09220;partial=true;product=ethanolamine ammonia-lyase light chain EutC;protein_id=WP_223961191.1;transl_table=11 ##sequence-region NZ_CAJZAS010000086.1 1 4393 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000086.1 RefSeq region 1 4393 . + . ID=NZ_CAJZAS010000086.1:1..4393;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_176 NZ_CAJZAS010000086.1 RefSeq pseudogene 1 547 . + . ID=gene-LDO45_RS09225;Name=LDO45_RS09225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS09225;old_locus_tag=BDI4_1760001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000086.1 Protein Homology CDS 1 547 . + 1 ID=cds-LDO45_RS09225;Parent=gene-LDO45_RS09225;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004541116.1;locus_tag=LDO45_RS09225;partial=true;product=error-prone DNA polymerase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000086.1 RefSeq gene 868 1602 . + . ID=gene-LDO45_RS09230;Name=LDO45_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09230;old_locus_tag=BDI4_1760002 NZ_CAJZAS010000086.1 Protein Homology CDS 868 1602 . + 0 ID=cds-WP_059526168.1;Parent=gene-LDO45_RS09230;Dbxref=GenBank:WP_059526168.1;Name=WP_059526168.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334292.1;locus_tag=LDO45_RS09230;product=GntR family transcriptional regulator;protein_id=WP_059526168.1;transl_table=11 NZ_CAJZAS010000086.1 RefSeq gene 1710 2813 . + . ID=gene-LDO45_RS09235;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=LDO45_RS09235;old_locus_tag=BDI4_1760003 NZ_CAJZAS010000086.1 Protein Homology CDS 1710 2813 . + 0 ID=cds-WP_059691447.1;Parent=gene-LDO45_RS09235;Dbxref=GenBank:WP_059691447.1;Name=WP_059691447.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008921875.1;locus_tag=LDO45_RS09235;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_059691447.1;transl_table=11 NZ_CAJZAS010000086.1 RefSeq gene 2806 3813 . + . ID=gene-LDO45_RS09240;Name=LDO45_RS09240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09240;old_locus_tag=BDI4_1760004 NZ_CAJZAS010000086.1 Protein Homology CDS 2806 3813 . + 0 ID=cds-WP_059526163.1;Parent=gene-LDO45_RS09240;Dbxref=GenBank:WP_059526163.1;Name=WP_059526163.1;Ontology_term=GO:0005975,GO:0016787,GO:0097367;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024455.1;locus_tag=LDO45_RS09240;product=SIS domain-containing protein;protein_id=WP_059526163.1;transl_table=11 NZ_CAJZAS010000086.1 RefSeq gene 3829 4393 . + . ID=gene-LDO45_RS09245;Name=LDO45_RS09245;end_range=4393,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09245;partial=true NZ_CAJZAS010000086.1 Protein Homology CDS 3829 4393 . + 0 ID=cds-WP_223961193.1;Parent=gene-LDO45_RS09245;Dbxref=GenBank:WP_223961193.1;Name=WP_223961193.1;end_range=4393,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546260.1;locus_tag=LDO45_RS09245;partial=true;product=PTS glucose transporter subunit IIA;protein_id=WP_223961193.1;transl_table=11 ##sequence-region NZ_CAJZAS010000087.1 1 7971 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000087.1 RefSeq region 1 7971 . + . ID=NZ_CAJZAS010000087.1:1..7971;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_177 NZ_CAJZAS010000087.1 RefSeq gene 1 620 . + . ID=gene-LDO45_RS09250;Name=eutC;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=LDO45_RS09250;old_locus_tag=BDI4_1770001;partial=true;start_range=.,1 NZ_CAJZAS010000087.1 Protein Homology CDS 1 620 . + 2 ID=cds-WP_223961195.1;Parent=gene-LDO45_RS09250;Dbxref=GenBank:WP_223961195.1;Name=WP_223961195.1;Ontology_term=GO:0006520,GO:0008851;gbkey=CDS;gene=eutC;go_function=ethanolamine ammonia-lyase activity|0008851||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010093070.1;locus_tag=LDO45_RS09250;partial=true;product=ethanolamine ammonia-lyase subunit EutC;protein_id=WP_223961195.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000087.1 RefSeq gene 634 1518 . - . ID=gene-LDO45_RS09255;Name=LDO45_RS09255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09255;old_locus_tag=BDI4_1770002 NZ_CAJZAS010000087.1 Protein Homology CDS 634 1518 . - 0 ID=cds-WP_059699614.1;Parent=gene-LDO45_RS09255;Dbxref=GenBank:WP_059699614.1;Name=WP_059699614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546777.1;locus_tag=LDO45_RS09255;product=LysR family transcriptional regulator;protein_id=WP_059699614.1;transl_table=11 NZ_CAJZAS010000087.1 RefSeq pseudogene 1661 3083 . + . ID=gene-LDO45_RS09260;Name=LDO45_RS09260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS09260;old_locus_tag=BDI4_1770004;pseudo=true NZ_CAJZAS010000087.1 Protein Homology CDS 1661 3083 . + 0 ID=cds-LDO45_RS09260;Parent=gene-LDO45_RS09260;Note=frameshifted%3B too many ambiguous residues;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754006.1;locus_tag=LDO45_RS09260;product=MFS transporter;pseudo=true;transl_table=11 NZ_CAJZAS010000087.1 RefSeq gene 3308 3736 . - . ID=gene-LDO45_RS09265;Name=LDO45_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09265;old_locus_tag=BDI4_1770005 NZ_CAJZAS010000087.1 Protein Homology CDS 3308 3736 . - 0 ID=cds-WP_059691516.1;Parent=gene-LDO45_RS09265;Dbxref=GenBank:WP_059691516.1;Name=WP_059691516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362790.1;locus_tag=LDO45_RS09265;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_059691516.1;transl_table=11 NZ_CAJZAS010000087.1 RefSeq gene 4054 5580 . + . ID=gene-LDO45_RS09270;Name=LDO45_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09270;old_locus_tag=BDI4_1770006 NZ_CAJZAS010000087.1 Protein Homology CDS 4054 5580 . + 0 ID=cds-WP_059531136.1;Parent=gene-LDO45_RS09270;Dbxref=GenBank:WP_059531136.1;Name=WP_059531136.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489874.1;locus_tag=LDO45_RS09270;product=aldehyde dehydrogenase family protein;protein_id=WP_059531136.1;transl_table=11 NZ_CAJZAS010000087.1 RefSeq gene 5830 6372 . + . ID=gene-LDO45_RS09275;Name=LDO45_RS09275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09275;old_locus_tag=BDI4_1770007 NZ_CAJZAS010000087.1 Protein Homology CDS 5830 6372 . + 0 ID=cds-WP_223961197.1;Parent=gene-LDO45_RS09275;Dbxref=GenBank:WP_223961197.1;Name=WP_223961197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882842.1;locus_tag=LDO45_RS09275;product=hypothetical protein;protein_id=WP_223961197.1;transl_table=11 NZ_CAJZAS010000087.1 RefSeq gene 6558 7592 . + . ID=gene-LDO45_RS09280;Name=LDO45_RS09280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09280;old_locus_tag=BDI4_1770008 NZ_CAJZAS010000087.1 Protein Homology CDS 6558 7592 . + 0 ID=cds-WP_059531131.1;Parent=gene-LDO45_RS09280;Dbxref=GenBank:WP_059531131.1;Name=WP_059531131.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362792.1;locus_tag=LDO45_RS09280;product=helix-turn-helix domain-containing protein;protein_id=WP_059531131.1;transl_table=11 NZ_CAJZAS010000087.1 RefSeq pseudogene 7654 7971 . - . ID=gene-LDO45_RS09285;Name=LDO45_RS09285;end_range=7971,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS09285;old_locus_tag=BDI4_1770009;partial=true;pseudo=true NZ_CAJZAS010000087.1 Protein Homology CDS 7654 7971 . - 0 ID=cds-LDO45_RS09285;Parent=gene-LDO45_RS09285;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=7971,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759707.1;locus_tag=LDO45_RS09285;partial=true;product=ADP-heptose--LPS heptosyltransferase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000088.1 1 4958 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000088.1 RefSeq region 1 4958 . + . ID=NZ_CAJZAS010000088.1:1..4958;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_178 NZ_CAJZAS010000088.1 RefSeq pseudogene 302 382 . + . ID=gene-LDO45_RS34515;Name=LDO45_RS34515;end_range=382,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34515;old_locus_tag=BDI4_1780001;partial=true;pseudo=true NZ_CAJZAS010000088.1 Protein Homology CDS 302 382 . + 0 ID=cds-LDO45_RS34515;Parent=gene-LDO45_RS34515;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003677;end_range=382,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012576.5;locus_tag=LDO45_RS34515;partial=true;product=LacI family DNA-binding transcriptional regulator;pseudo=true;transl_table=11 NZ_CAJZAS010000088.1 RefSeq gene 405 907 . + . ID=gene-LDO45_RS09290;Name=LDO45_RS09290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09290;old_locus_tag=BDI4_1780002;partial=true;start_range=.,405 NZ_CAJZAS010000088.1 Protein Homology CDS 405 907 . + 2 ID=cds-WP_374109526.1;Parent=gene-LDO45_RS09290;Dbxref=GenBank:WP_374109526.1;Name=WP_374109526.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398052.1;locus_tag=LDO45_RS09290;partial=true;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_374109526.1;start_range=.,405;transl_table=11 NZ_CAJZAS010000088.1 RefSeq gene 904 2184 . + . ID=gene-LDO45_RS09295;Name=LDO45_RS09295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09295;old_locus_tag=BDI4_1780003 NZ_CAJZAS010000088.1 Protein Homology CDS 904 2184 . + 0 ID=cds-WP_175981842.1;Parent=gene-LDO45_RS09295;Dbxref=GenBank:WP_175981842.1;Name=WP_175981842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754116.1;locus_tag=LDO45_RS09295;product=AGE family epimerase/isomerase;protein_id=WP_175981842.1;transl_table=11 NZ_CAJZAS010000088.1 RefSeq gene 2181 3089 . + . ID=gene-LDO45_RS09300;Name=LDO45_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09300;old_locus_tag=BDI4_1780004 NZ_CAJZAS010000088.1 Protein Homology CDS 2181 3089 . + 0 ID=cds-WP_175981844.1;Parent=gene-LDO45_RS09300;Dbxref=GenBank:WP_175981844.1;Name=WP_175981844.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409152.1;locus_tag=LDO45_RS09300;product=carbohydrate kinase;protein_id=WP_175981844.1;transl_table=11 NZ_CAJZAS010000088.1 RefSeq gene 3188 3409 . + . ID=gene-LDO45_RS09305;Name=LDO45_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09305;old_locus_tag=BDI4_1780005 NZ_CAJZAS010000088.1 Protein Homology CDS 3188 3409 . + 0 ID=cds-WP_059523876.1;Parent=gene-LDO45_RS09305;Dbxref=GenBank:WP_059523876.1;Name=WP_059523876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353424.1;locus_tag=LDO45_RS09305;product=hypothetical protein;protein_id=WP_059523876.1;transl_table=11 NZ_CAJZAS010000088.1 RefSeq gene 3487 3681 . - . ID=gene-LDO45_RS09310;Name=LDO45_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09310;old_locus_tag=BDI4_1780006 NZ_CAJZAS010000088.1 Protein Homology CDS 3487 3681 . - 0 ID=cds-WP_223961199.1;Parent=gene-LDO45_RS09310;Dbxref=GenBank:WP_223961199.1;Name=WP_223961199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895841.1;locus_tag=LDO45_RS09310;product=DUF2905 domain-containing protein;protein_id=WP_223961199.1;transl_table=11 NZ_CAJZAS010000088.1 RefSeq pseudogene 3695 4905 . - . ID=gene-LDO45_RS09315;Name=LDO45_RS09315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS09315;old_locus_tag=BDI4_1780007;pseudo=true NZ_CAJZAS010000088.1 Protein Homology CDS 3695 4905 . - 0 ID=cds-LDO45_RS09315;Parent=gene-LDO45_RS09315;Note=frameshifted%3B too many ambiguous residues;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019256186.1;locus_tag=LDO45_RS09315;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000089.1 1 5296 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000089.1 RefSeq region 1 5296 . + . ID=NZ_CAJZAS010000089.1:1..5296;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_179 NZ_CAJZAS010000089.1 RefSeq gene 1 1003 . + . ID=gene-LDO45_RS09320;Name=LDO45_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09320;old_locus_tag=BDI4_1790001;partial=true;start_range=.,1 NZ_CAJZAS010000089.1 Protein Homology CDS 1 1003 . + 1 ID=cds-WP_223961201.1;Parent=gene-LDO45_RS09320;Dbxref=GenBank:WP_223961201.1;Name=WP_223961201.1;Ontology_term=GO:0090529;gbkey=CDS;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755126.1;locus_tag=LDO45_RS09320;partial=true;product=cell division protein ZipA C-terminal FtsZ-binding domain-containing protein;protein_id=WP_223961201.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000089.1 RefSeq gene 1177 3252 . + . ID=gene-LDO45_RS09325;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=LDO45_RS09325;old_locus_tag=BDI4_1790002 NZ_CAJZAS010000089.1 Protein Homology CDS 1177 3252 . + 0 ID=cds-WP_059529314.1;Parent=gene-LDO45_RS09325;Dbxref=GenBank:WP_059529314.1;Name=WP_059529314.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328763.1;locus_tag=LDO45_RS09325;product=NAD-dependent DNA ligase LigA;protein_id=WP_059529314.1;transl_table=11 NZ_CAJZAS010000089.1 RefSeq gene 3249 3782 . + . ID=gene-LDO45_RS09330;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=LDO45_RS09330;old_locus_tag=BDI4_1790003 NZ_CAJZAS010000089.1 Protein Homology CDS 3249 3782 . + 0 ID=cds-WP_059511077.1;Parent=gene-LDO45_RS09330;Dbxref=GenBank:WP_059511077.1;Name=WP_059511077.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890431.1;locus_tag=LDO45_RS09330;product=peptide deformylase;protein_id=WP_059511077.1;transl_table=11 NZ_CAJZAS010000089.1 RefSeq gene 3880 5296 . - . ID=gene-LDO45_RS09335;Name=LDO45_RS09335;end_range=5296,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09335;partial=true NZ_CAJZAS010000089.1 Protein Homology CDS 3880 5296 . - 1 ID=cds-WP_223961203.1;Parent=gene-LDO45_RS09335;Dbxref=GenBank:WP_223961203.1;Name=WP_223961203.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0016866;end_range=5296,.;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,intramolecular transferase activity|0016866||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657287.1;locus_tag=LDO45_RS09335;partial=true;product=pseudouridine synthase;protein_id=WP_223961203.1;transl_table=11 ##sequence-region NZ_CAJZAS010000090.1 1 26071 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000090.1 RefSeq region 1 26071 . + . ID=NZ_CAJZAS010000090.1:1..26071;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_18 NZ_CAJZAS010000090.1 RefSeq gene 18 2753 . - . ID=gene-LDO45_RS09340;Name=LDO45_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09340;old_locus_tag=BDI4_180001 NZ_CAJZAS010000090.1 Protein Homology CDS 18 2753 . - 0 ID=cds-WP_223961205.1;Parent=gene-LDO45_RS09340;Dbxref=GenBank:WP_223961205.1;Name=WP_223961205.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700164.1;locus_tag=LDO45_RS09340;product=type VI secretion system Vgr family protein;protein_id=WP_223961205.1;transl_table=11 NZ_CAJZAS010000090.1 RefSeq gene 2771 3022 . - . ID=gene-LDO45_RS09345;Name=LDO45_RS09345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09345;old_locus_tag=BDI4_180002 NZ_CAJZAS010000090.1 Protein Homology CDS 2771 3022 . - 0 ID=cds-WP_082725317.1;Parent=gene-LDO45_RS09345;Dbxref=GenBank:WP_082725317.1;Name=WP_082725317.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012402950.1;locus_tag=LDO45_RS09345;product=PAAR domain-containing protein;protein_id=WP_082725317.1;transl_table=11 NZ_CAJZAS010000090.1 RefSeq gene 3281 4285 . + . ID=gene-LDO45_RS09350;Name=LDO45_RS09350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09350;old_locus_tag=BDI4_180004 NZ_CAJZAS010000090.1 Protein Homology CDS 3281 4285 . + 0 ID=cds-WP_059690698.1;Parent=gene-LDO45_RS09350;Dbxref=GenBank:WP_059690698.1;Name=WP_059690698.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895426.1;locus_tag=LDO45_RS09350;product=ABC transporter substrate-binding protein;protein_id=WP_059690698.1;transl_table=11 NZ_CAJZAS010000090.1 RefSeq gene 4407 5204 . + . ID=gene-LDO45_RS09355;Name=LDO45_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09355;old_locus_tag=BDI4_180005 NZ_CAJZAS010000090.1 Protein Homology CDS 4407 5204 . + 0 ID=cds-WP_059531344.1;Parent=gene-LDO45_RS09355;Dbxref=GenBank:WP_059531344.1;Name=WP_059531344.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004205003.1;locus_tag=LDO45_RS09355;product=ABC transporter ATP-binding protein;protein_id=WP_059531344.1;transl_table=11 NZ_CAJZAS010000090.1 RefSeq gene 5229 6086 . + . ID=gene-LDO45_RS09360;Name=LDO45_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09360;old_locus_tag=BDI4_180006 NZ_CAJZAS010000090.1 Protein Homology CDS 5229 6086 . + 0 ID=cds-WP_107938093.1;Parent=gene-LDO45_RS09360;Dbxref=GenBank:WP_107938093.1;Name=WP_107938093.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882748.1;locus_tag=LDO45_RS09360;product=ABC transporter permease;protein_id=WP_107938093.1;transl_table=11 NZ_CAJZAS010000090.1 RefSeq gene 6160 7527 . + . ID=gene-LDO45_RS09365;Name=LDO45_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09365;old_locus_tag=BDI4_180007 NZ_CAJZAS010000090.1 Protein Homology CDS 6160 7527 . + 0 ID=cds-WP_223961207.1;Parent=gene-LDO45_RS09365;Dbxref=GenBank:WP_223961207.1;Name=WP_223961207.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495405.1;locus_tag=LDO45_RS09365;product=sensor histidine kinase;protein_id=WP_223961207.1;transl_table=11 NZ_CAJZAS010000090.1 RefSeq gene 7540 8217 . + . ID=gene-LDO45_RS09370;Name=LDO45_RS09370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09370;old_locus_tag=BDI4_180008 NZ_CAJZAS010000090.1 Protein Homology CDS 7540 8217 . + 0 ID=cds-WP_059531350.1;Parent=gene-LDO45_RS09370;Dbxref=GenBank:WP_059531350.1;Name=WP_059531350.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655563.1;locus_tag=LDO45_RS09370;product=response regulator;protein_id=WP_059531350.1;transl_table=11 NZ_CAJZAS010000090.1 RefSeq gene 8473 9603 . + . ID=gene-LDO45_RS09375;Name=LDO45_RS09375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09375;old_locus_tag=BDI4_180009 NZ_CAJZAS010000090.1 Protein Homology CDS 8473 9603 . + 0 ID=cds-WP_059699551.1;Parent=gene-LDO45_RS09375;Dbxref=GenBank:WP_059699551.1;Name=WP_059699551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895421.1;locus_tag=LDO45_RS09375;product=porin;protein_id=WP_059699551.1;transl_table=11 NZ_CAJZAS010000090.1 RefSeq gene 9940 11958 . + . ID=gene-LDO45_RS09380;Name=LDO45_RS09380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09380;old_locus_tag=BDI4_180010 NZ_CAJZAS010000090.1 Protein Homology CDS 9940 11958 . + 0 ID=cds-WP_059699549.1;Parent=gene-LDO45_RS09380;Dbxref=GenBank:WP_059699549.1;Name=WP_059699549.1;Ontology_term=GO:0006306,GO:0003677,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=obsolete DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722124.1;locus_tag=LDO45_RS09380;product=site-specific DNA-methyltransferase;protein_id=WP_059699549.1;transl_table=11 NZ_CAJZAS010000090.1 RefSeq gene 11958 14993 . + . ID=gene-LDO45_RS09385;Name=LDO45_RS09385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09385;old_locus_tag=BDI4_180011 NZ_CAJZAS010000090.1 Protein Homology CDS 11958 14993 . + 0 ID=cds-WP_223961209.1;Parent=gene-LDO45_RS09385;Dbxref=GenBank:WP_223961209.1;Name=WP_223961209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495409.1;locus_tag=LDO45_RS09385;product=type III restriction-modification system endonuclease;protein_id=WP_223961209.1;transl_table=11 NZ_CAJZAS010000090.1 RefSeq gene 15221 15592 . - . ID=gene-LDO45_RS09390;Name=LDO45_RS09390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09390;old_locus_tag=BDI4_180012 NZ_CAJZAS010000090.1 Protein Homology CDS 15221 15592 . - 0 ID=cds-WP_223961211.1;Parent=gene-LDO45_RS09390;Dbxref=GenBank:WP_223961211.1;Name=WP_223961211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750409.1;locus_tag=LDO45_RS09390;product=hypothetical protein;protein_id=WP_223961211.1;transl_table=11 NZ_CAJZAS010000090.1 RefSeq gene 15825 16079 . - . ID=gene-LDO45_RS09395;Name=LDO45_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09395;old_locus_tag=BDI4_180014 NZ_CAJZAS010000090.1 Protein Homology CDS 15825 16079 . - 0 ID=cds-WP_059531365.1;Parent=gene-LDO45_RS09395;Dbxref=GenBank:WP_059531365.1;Name=WP_059531365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212432.1;locus_tag=LDO45_RS09395;product=hypothetical protein;protein_id=WP_059531365.1;transl_table=11 NZ_CAJZAS010000090.1 RefSeq gene 16136 16438 . - . ID=gene-LDO45_RS09400;Name=LDO45_RS09400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09400;old_locus_tag=BDI4_180015 NZ_CAJZAS010000090.1 Protein Homology CDS 16136 16438 . - 0 ID=cds-WP_059531368.1;Parent=gene-LDO45_RS09400;Dbxref=GenBank:WP_059531368.1;Name=WP_059531368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882740.1;locus_tag=LDO45_RS09400;product=hypothetical protein;protein_id=WP_059531368.1;transl_table=11 NZ_CAJZAS010000090.1 RefSeq gene 16688 17701 . - . ID=gene-LDO45_RS09405;Name=egtD;gbkey=Gene;gene=egtD;gene_biotype=protein_coding;locus_tag=LDO45_RS09405;old_locus_tag=BDI4_180016 NZ_CAJZAS010000090.1 Protein Homology CDS 16688 17701 . - 0 ID=cds-WP_223961213.1;Parent=gene-LDO45_RS09405;Dbxref=GenBank:WP_223961213.1;Name=WP_223961213.1;Ontology_term=GO:0052699,GO:0030745;gbkey=CDS;gene=egtD;go_function=dimethylhistidine N-methyltransferase activity|0030745||IEA;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412578.1;locus_tag=LDO45_RS09405;product=L-histidine N(alpha)-methyltransferase;protein_id=WP_223961213.1;transl_table=11 NZ_CAJZAS010000090.1 RefSeq gene 17685 18914 . - . ID=gene-LDO45_RS09410;Name=egtB;gbkey=Gene;gene=egtB;gene_biotype=protein_coding;locus_tag=LDO45_RS09410;old_locus_tag=BDI4_180017 NZ_CAJZAS010000090.1 Protein Homology CDS 17685 18914 . - 0 ID=cds-WP_223961215.1;Parent=gene-LDO45_RS09410;Dbxref=GenBank:WP_223961215.1;Name=WP_223961215.1;Ontology_term=GO:0052699;gbkey=CDS;gene=egtB;go_process=ergothioneine biosynthetic process|0052699||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327561.1;locus_tag=LDO45_RS09410;product=ergothioneine biosynthesis protein EgtB;protein_id=WP_223961215.1;transl_table=11 NZ_CAJZAS010000090.1 RefSeq gene 18911 19324 . - . ID=gene-LDO45_RS09415;Name=LDO45_RS09415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09415 NZ_CAJZAS010000090.1 GeneMarkS-2+ CDS 18911 19324 . - 0 ID=cds-WP_223961217.1;Parent=gene-LDO45_RS09415;Dbxref=GenBank:WP_223961217.1;Name=WP_223961217.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS09415;product=hypothetical protein;protein_id=WP_223961217.1;transl_table=11 NZ_CAJZAS010000090.1 RefSeq gene 19497 19973 . + . ID=gene-LDO45_RS09420;Name=LDO45_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09420;old_locus_tag=BDI4_180018 NZ_CAJZAS010000090.1 Protein Homology CDS 19497 19973 . + 0 ID=cds-WP_059602222.1;Parent=gene-LDO45_RS09420;Dbxref=GenBank:WP_059602222.1;Name=WP_059602222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477215.1;locus_tag=LDO45_RS09420;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_059602222.1;transl_table=11 NZ_CAJZAS010000090.1 RefSeq gene 19973 20854 . + . ID=gene-LDO45_RS09425;Name=LDO45_RS09425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09425;old_locus_tag=BDI4_180019 NZ_CAJZAS010000090.1 Protein Homology CDS 19973 20854 . + 0 ID=cds-WP_223961219.1;Parent=gene-LDO45_RS09425;Dbxref=GenBank:WP_223961219.1;Name=WP_223961219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655554.1;locus_tag=LDO45_RS09425;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_223961219.1;transl_table=11 NZ_CAJZAS010000090.1 RefSeq gene 21065 21141 . - . ID=gene-LDO45_RS09430;Name=LDO45_RS09430;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS09430;old_locus_tag=BDI4_TRNA49 NZ_CAJZAS010000090.1 tRNAscan-SE tRNA 21065 21141 . - . ID=rna-LDO45_RS09430;Parent=gene-LDO45_RS09430;anticodon=(pos:complement(21105..21107));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS09430;product=tRNA-Val NZ_CAJZAS010000090.1 tRNAscan-SE exon 21065 21141 . - . ID=exon-LDO45_RS09430-1;Parent=rna-LDO45_RS09430;anticodon=(pos:complement(21105..21107));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS09430;product=tRNA-Val NZ_CAJZAS010000090.1 RefSeq gene 21776 22333 . + . ID=gene-LDO45_RS09435;Name=LDO45_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09435;old_locus_tag=BDI4_180020 NZ_CAJZAS010000090.1 GeneMarkS-2+ CDS 21776 22333 . + 0 ID=cds-WP_223961224.1;Parent=gene-LDO45_RS09435;Dbxref=GenBank:WP_223961224.1;Name=WP_223961224.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS09435;product=hypothetical protein;protein_id=WP_223961224.1;transl_table=11 NZ_CAJZAS010000090.1 RefSeq gene 22806 23567 . - . ID=gene-LDO45_RS09440;Name=LDO45_RS09440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09440;old_locus_tag=BDI4_180021 NZ_CAJZAS010000090.1 Protein Homology CDS 22806 23567 . - 0 ID=cds-WP_059531388.1;Parent=gene-LDO45_RS09440;Dbxref=GenBank:WP_059531388.1;Name=WP_059531388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882732.1;locus_tag=LDO45_RS09440;product=anti-sigma factor;protein_id=WP_059531388.1;transl_table=11 NZ_CAJZAS010000090.1 RefSeq gene 23564 24082 . - . ID=gene-LDO45_RS09445;Name=LDO45_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09445;old_locus_tag=BDI4_180022 NZ_CAJZAS010000090.1 Protein Homology CDS 23564 24082 . - 0 ID=cds-WP_059531391.1;Parent=gene-LDO45_RS09445;Dbxref=GenBank:WP_059531391.1;Name=WP_059531391.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011401646.1;locus_tag=LDO45_RS09445;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_059531391.1;transl_table=11 NZ_CAJZAS010000090.1 RefSeq gene 24240 25328 . + . ID=gene-LDO45_RS09450;Name=LDO45_RS09450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09450;old_locus_tag=BDI4_180023 NZ_CAJZAS010000090.1 Protein Homology CDS 24240 25328 . + 0 ID=cds-WP_223961222.1;Parent=gene-LDO45_RS09450;Dbxref=GenBank:WP_223961222.1;Name=WP_223961222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416504.1;locus_tag=LDO45_RS09450;product=catalase family peroxidase;protein_id=WP_223961222.1;transl_table=11 NZ_CAJZAS010000090.1 RefSeq gene 25325 25858 . + . ID=gene-LDO45_RS09455;Name=LDO45_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09455;old_locus_tag=BDI4_180024 NZ_CAJZAS010000090.1 Protein Homology CDS 25325 25858 . + 0 ID=cds-WP_059531397.1;Parent=gene-LDO45_RS09455;Dbxref=GenBank:WP_059531397.1;Name=WP_059531397.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004541787.1;locus_tag=LDO45_RS09455;product=cytochrome b;protein_id=WP_059531397.1;transl_table=11 ##sequence-region NZ_CAJZAS010000091.1 1 6420 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000091.1 RefSeq region 1 6420 . + . ID=NZ_CAJZAS010000091.1:1..6420;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_180 NZ_CAJZAS010000091.1 RefSeq gene 1 238 . + . ID=gene-LDO45_RS09460;Name=LDO45_RS09460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09460;old_locus_tag=BDI4_1800001;partial=true;start_range=.,1 NZ_CAJZAS010000091.1 Protein Homology CDS 1 238 . + 1 ID=cds-WP_223961226.1;Parent=gene-LDO45_RS09460;Dbxref=GenBank:WP_223961226.1;Name=WP_223961226.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004548392.1;locus_tag=LDO45_RS09460;partial=true;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_223961226.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000091.1 RefSeq gene 256 1086 . + . ID=gene-LDO45_RS09465;Name=LDO45_RS09465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09465;old_locus_tag=BDI4_1800002 NZ_CAJZAS010000091.1 Protein Homology CDS 256 1086 . + 0 ID=cds-WP_223961228.1;Parent=gene-LDO45_RS09465;Dbxref=GenBank:WP_223961228.1;Name=WP_223961228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353831.1;locus_tag=LDO45_RS09465;product=heme ABC transporter ATP-binding protein;protein_id=WP_223961228.1;transl_table=11 NZ_CAJZAS010000091.1 RefSeq gene 1123 1734 . - . ID=gene-LDO45_RS09470;Name=LDO45_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09470;old_locus_tag=BDI4_1800003 NZ_CAJZAS010000091.1 Protein Homology CDS 1123 1734 . - 0 ID=cds-WP_223961230.1;Parent=gene-LDO45_RS09470;Dbxref=GenBank:WP_223961230.1;Name=WP_223961230.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900898.1;locus_tag=LDO45_RS09470;product=trimeric intracellular cation channel family protein;protein_id=WP_223961230.1;transl_table=11 NZ_CAJZAS010000091.1 RefSeq gene 1743 3869 . - . ID=gene-LDO45_RS09475;Name=LDO45_RS09475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09475;old_locus_tag=BDI4_1800004 NZ_CAJZAS010000091.1 Protein Homology CDS 1743 3869 . - 0 ID=cds-WP_223961232.1;Parent=gene-LDO45_RS09475;Dbxref=GenBank:WP_223961232.1;Name=WP_223961232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496214.1;locus_tag=LDO45_RS09475;product=penicillin-binding protein 1A;protein_id=WP_223961232.1;transl_table=11 NZ_CAJZAS010000091.1 RefSeq gene 4079 4876 . + . ID=gene-LDO45_RS09480;Name=LDO45_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09480;old_locus_tag=BDI4_1800005 NZ_CAJZAS010000091.1 Protein Homology CDS 4079 4876 . + 0 ID=cds-WP_223961233.1;Parent=gene-LDO45_RS09480;Dbxref=GenBank:WP_223961233.1;Name=WP_223961233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353827.1;locus_tag=LDO45_RS09480;product=aminoglycoside phosphotransferase family protein;protein_id=WP_223961233.1;transl_table=11 NZ_CAJZAS010000091.1 RefSeq gene 4984 5781 . - . ID=gene-LDO45_RS09485;Name=LDO45_RS09485;end_range=5781,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09485;old_locus_tag=BDI4_1800006;partial=true NZ_CAJZAS010000091.1 Protein Homology CDS 4984 5781 . - 0 ID=cds-WP_223961234.1;Parent=gene-LDO45_RS09485;Dbxref=GenBank:WP_223961234.1;Name=WP_223961234.1;Ontology_term=GO:0010136,GO:0004037,GO:0071522;end_range=5781,.;gbkey=CDS;go_function=allantoicase activity|0004037||IEA,ureidoglycine aminohydrolase activity|0071522||IEA;go_process=ureide catabolic process|0010136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880980.1;locus_tag=LDO45_RS09485;partial=true;product=bifunctional allantoicase/(S)-ureidoglycine aminohydrolase;protein_id=WP_223961234.1;transl_table=11 NZ_CAJZAS010000091.1 RefSeq gene 6196 6420 . + . ID=gene-LDO45_RS09490;Name=LDO45_RS09490;end_range=6420,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09490;partial=true NZ_CAJZAS010000091.1 GeneMarkS-2+ CDS 6196 6420 . + 0 ID=cds-WP_223961236.1;Parent=gene-LDO45_RS09490;Dbxref=GenBank:WP_223961236.1;Name=WP_223961236.1;end_range=6420,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS09490;partial=true;product=hypothetical protein;protein_id=WP_223961236.1;transl_table=11 ##sequence-region NZ_CAJZAS010000092.1 1 12048 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000092.1 RefSeq region 1 12048 . + . ID=NZ_CAJZAS010000092.1:1..12048;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_181 NZ_CAJZAS010000092.1 RefSeq gene 1 1098 . + . ID=gene-LDO45_RS09495;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=LDO45_RS09495;old_locus_tag=BDI4_1810001;partial=true;start_range=.,1 NZ_CAJZAS010000092.1 Protein Homology CDS 1 1098 . + 0 ID=cds-WP_223961238.1;Parent=gene-LDO45_RS09495;Dbxref=GenBank:WP_223961238.1;Name=WP_223961238.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401751.1;locus_tag=LDO45_RS09495;partial=true;product=chromosomal replication initiator protein DnaA;protein_id=WP_223961238.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000092.1 RefSeq gene 1269 2375 . + . ID=gene-LDO45_RS09500;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=LDO45_RS09500;old_locus_tag=BDI4_1810002 NZ_CAJZAS010000092.1 Protein Homology CDS 1269 2375 . + 0 ID=cds-WP_006756934.1;Parent=gene-LDO45_RS09500;Dbxref=GenBank:WP_006756934.1;Name=WP_006756934.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906826.1;locus_tag=LDO45_RS09500;product=DNA polymerase III subunit beta;protein_id=WP_006756934.1;transl_table=11 NZ_CAJZAS010000092.1 RefSeq gene 2569 5043 . + . ID=gene-LDO45_RS09505;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=LDO45_RS09505;old_locus_tag=BDI4_1810003 NZ_CAJZAS010000092.1 Protein Homology CDS 2569 5043 . + 0 ID=cds-WP_175911207.1;Parent=gene-LDO45_RS09505;Dbxref=GenBank:WP_175911207.1;Name=WP_175911207.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906825.1;locus_tag=LDO45_RS09505;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_175911207.1;transl_table=11 NZ_CAJZAS010000092.1 RefSeq pseudogene 5159 5995 . + . ID=gene-LDO45_RS09510;Name=LDO45_RS09510;end_range=5995,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS09510;partial=true;pseudo=true NZ_CAJZAS010000092.1 Protein Homology CDS 5159 5995 . + 0 ID=cds-LDO45_RS09510;Parent=gene-LDO45_RS09510;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=5995,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010959400.1;locus_tag=LDO45_RS09510;partial=true;product=IS256 family transposase;pseudo=true;transl_table=11 NZ_CAJZAS010000092.1 RefSeq pseudogene 6123 6281 . - . ID=gene-LDO45_RS09515;Name=LDO45_RS09515;end_range=6281,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS09515;old_locus_tag=BDI4_1810007;partial=true;pseudo=true;start_range=.,6123 NZ_CAJZAS010000092.1 Protein Homology CDS 6123 6281 . - 0 ID=cds-LDO45_RS09515;Parent=gene-LDO45_RS09515;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=6281,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611304.1;locus_tag=LDO45_RS09515;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,6123;transl_table=11 NZ_CAJZAS010000092.1 RefSeq gene 6577 9189 . + . ID=gene-LDO45_RS09520;Name=LDO45_RS09520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09520;old_locus_tag=BDI4_1810008 NZ_CAJZAS010000092.1 Protein Homology CDS 6577 9189 . + 0 ID=cds-WP_223961240.1;Parent=gene-LDO45_RS09520;Dbxref=GenBank:WP_223961240.1;Name=WP_223961240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020204197.1;locus_tag=LDO45_RS09520;product=McrB family protein;protein_id=WP_223961240.1;transl_table=11 NZ_CAJZAS010000092.1 RefSeq gene 9193 11478 . + . ID=gene-LDO45_RS09525;Name=LDO45_RS09525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09525;old_locus_tag=BDI4_1810009 NZ_CAJZAS010000092.1 Protein Homology CDS 9193 11478 . + 0 ID=cds-WP_223961243.1;Parent=gene-LDO45_RS09525;Dbxref=GenBank:WP_223961243.1;Name=WP_223961243.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655547.1;locus_tag=LDO45_RS09525;product=DUF2357 domain-containing protein;protein_id=WP_223961243.1;transl_table=11 ##sequence-region NZ_CAJZAS010000093.1 1 546 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000093.1 RefSeq region 1 546 . + . ID=NZ_CAJZAS010000093.1:1..546;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_182 NZ_CAJZAS010000093.1 RefSeq pseudogene 1 546 . + . ID=gene-LDO45_RS09530;Name=LDO45_RS09530;end_range=546,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS09530;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000093.1 Protein Homology CDS 1 546 . + 2 ID=cds-LDO45_RS09530;Parent=gene-LDO45_RS09530;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=546,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406002.1;locus_tag=LDO45_RS09530;partial=true;product=adhesin;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAS010000094.1 1 11150 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000094.1 RefSeq region 1 11150 . + . ID=NZ_CAJZAS010000094.1:1..11150;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_183 NZ_CAJZAS010000094.1 RefSeq gene 1 1176 . - . ID=gene-LDO45_RS09535;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=LDO45_RS09535;partial=true;start_range=.,1 NZ_CAJZAS010000094.1 Protein Homology CDS 1 1176 . - 0 ID=cds-WP_223961245.1;Parent=gene-LDO45_RS09535;Dbxref=GenBank:WP_223961245.1;Name=WP_223961245.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213246.1;locus_tag=LDO45_RS09535;partial=true;product=DNA polymerase III subunit gamma/tau;protein_id=WP_223961245.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000094.1 RefSeq gene 1304 1402 . - . ID=gene-LDO45_RS09540;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=LDO45_RS09540;old_locus_tag=BDI4_MISCRNA54 NZ_CAJZAS010000094.1 cmsearch SRP_RNA 1304 1402 . - . ID=rna-LDO45_RS09540;Parent=gene-LDO45_RS09540;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO45_RS09540;product=signal recognition particle sRNA small type NZ_CAJZAS010000094.1 cmsearch exon 1304 1402 . - . ID=exon-LDO45_RS09540-1;Parent=rna-LDO45_RS09540;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO45_RS09540;product=signal recognition particle sRNA small type NZ_CAJZAS010000094.1 RefSeq gene 1816 2142 . + . ID=gene-LDO45_RS09545;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=LDO45_RS09545;old_locus_tag=BDI4_1830002 NZ_CAJZAS010000094.1 Protein Homology CDS 1816 2142 . + 0 ID=cds-WP_006402348.1;Parent=gene-LDO45_RS09545;Dbxref=GenBank:WP_006402348.1;Name=WP_006402348.1;Ontology_term=GO:0006662,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=glycerol ether metabolic process|0006662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026981.1;locus_tag=LDO45_RS09545;product=thioredoxin TrxA;protein_id=WP_006402348.1;transl_table=11 NZ_CAJZAS010000094.1 RefSeq gene 2337 3599 . + . ID=gene-LDO45_RS09550;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=LDO45_RS09550;old_locus_tag=BDI4_1830004 NZ_CAJZAS010000094.1 Protein Homology CDS 2337 3599 . + 0 ID=cds-WP_006478662.1;Parent=gene-LDO45_RS09550;Dbxref=GenBank:WP_006478662.1;Name=WP_006478662.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013435079.1;locus_tag=LDO45_RS09550;product=transcription termination factor Rho;protein_id=WP_006478662.1;transl_table=11 NZ_CAJZAS010000094.1 RefSeq gene 3731 4231 . + . ID=gene-LDO45_RS09555;Name=LDO45_RS09555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09555;old_locus_tag=BDI4_1830006 NZ_CAJZAS010000094.1 Protein Homology CDS 3731 4231 . + 0 ID=cds-WP_059693252.1;Parent=gene-LDO45_RS09555;Dbxref=GenBank:WP_059693252.1;Name=WP_059693252.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328636.1;locus_tag=LDO45_RS09555;product=MerR family transcriptional regulator;protein_id=WP_059693252.1;transl_table=11 NZ_CAJZAS010000094.1 RefSeq gene 4228 5784 . + . ID=gene-LDO45_RS09560;Name=LDO45_RS09560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09560;old_locus_tag=BDI4_1830005 NZ_CAJZAS010000094.1 Protein Homology CDS 4228 5784 . + 0 ID=cds-WP_223961247.1;Parent=gene-LDO45_RS09560;Dbxref=GenBank:WP_223961247.1;Name=WP_223961247.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255169.1;locus_tag=LDO45_RS09560;product=MFS transporter;protein_id=WP_223961247.1;transl_table=11 NZ_CAJZAS010000094.1 RefSeq gene 5823 6656 . + . ID=gene-LDO45_RS09565;Name=LDO45_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09565;old_locus_tag=BDI4_1830007 NZ_CAJZAS010000094.1 Protein Homology CDS 5823 6656 . + 0 ID=cds-WP_059529890.1;Parent=gene-LDO45_RS09565;Dbxref=GenBank:WP_059529890.1;Name=WP_059529890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764196.1;locus_tag=LDO45_RS09565;product=zinc-dependent peptidase;protein_id=WP_059529890.1;transl_table=11 NZ_CAJZAS010000094.1 RefSeq gene 6814 7077 . + . ID=gene-LDO45_RS09570;Name=LDO45_RS09570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09570;old_locus_tag=BDI4_1830008 NZ_CAJZAS010000094.1 Protein Homology CDS 6814 7077 . + 0 ID=cds-WP_040144297.1;Parent=gene-LDO45_RS09570;Dbxref=GenBank:WP_040144297.1;Name=WP_040144297.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010103191.1;locus_tag=LDO45_RS09570;product=type B 50S ribosomal protein L31;protein_id=WP_040144297.1;transl_table=11 NZ_CAJZAS010000094.1 RefSeq gene 7308 9065 . + . ID=gene-LDO45_RS09575;Name=LDO45_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09575;old_locus_tag=BDI4_1830009 NZ_CAJZAS010000094.1 Protein Homology CDS 7308 9065 . + 0 ID=cds-WP_059529887.1;Parent=gene-LDO45_RS09575;Dbxref=GenBank:WP_059529887.1;Name=WP_059529887.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753670.1;locus_tag=LDO45_RS09575;product=glycosyltransferase family 39 protein;protein_id=WP_059529887.1;transl_table=11 NZ_CAJZAS010000094.1 RefSeq gene 9068 10432 . + . ID=gene-LDO45_RS09580;Name=LDO45_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09580;old_locus_tag=BDI4_1830010 NZ_CAJZAS010000094.1 Protein Homology CDS 9068 10432 . + 0 ID=cds-WP_059529884.1;Parent=gene-LDO45_RS09580;Dbxref=GenBank:WP_059529884.1;Name=WP_059529884.1;Ontology_term=GO:0006855,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485071.1;locus_tag=LDO45_RS09580;product=MATE family efflux transporter;protein_id=WP_059529884.1;transl_table=11 NZ_CAJZAS010000094.1 RefSeq gene 10448 11150 . - . ID=gene-LDO45_RS09585;Name=lipA;end_range=11150,.;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=LDO45_RS09585;old_locus_tag=BDI4_1830011;partial=true NZ_CAJZAS010000094.1 Protein Homology CDS 10448 11150 . - 1 ID=cds-WP_223961249.1;Parent=gene-LDO45_RS09585;Dbxref=GenBank:WP_223961249.1;Name=WP_223961249.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;end_range=11150,.;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657038.1;locus_tag=LDO45_RS09585;partial=true;product=lipoyl synthase;protein_id=WP_223961249.1;transl_table=11 ##sequence-region NZ_CAJZAS010000095.1 1 2996 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000095.1 RefSeq region 1 2996 . + . ID=NZ_CAJZAS010000095.1:1..2996;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_184 NZ_CAJZAS010000095.1 RefSeq gene 1 1612 . + . ID=gene-LDO45_RS09590;Name=LDO45_RS09590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09590;old_locus_tag=BDI4_1840001;partial=true;start_range=.,1 NZ_CAJZAS010000095.1 Protein Homology CDS 1 1612 . + 1 ID=cds-WP_223961252.1;Parent=gene-LDO45_RS09590;Dbxref=GenBank:WP_223961252.1;Name=WP_223961252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483179.1;locus_tag=LDO45_RS09590;partial=true;product=M24 family metallopeptidase;protein_id=WP_223961252.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000095.1 RefSeq gene 1708 2148 . - . ID=gene-LDO45_RS09595;Name=LDO45_RS09595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09595;old_locus_tag=BDI4_1840002 NZ_CAJZAS010000095.1 Protein Homology CDS 1708 2148 . - 0 ID=cds-WP_006762551.1;Parent=gene-LDO45_RS09595;Dbxref=GenBank:WP_006762551.1;Name=WP_006762551.1;Ontology_term=GO:0044780;gbkey=CDS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402753.1;locus_tag=LDO45_RS09595;product=flagella synthesis protein FlgN;protein_id=WP_006762551.1;transl_table=11 NZ_CAJZAS010000095.1 RefSeq gene 2234 2566 . - . ID=gene-LDO45_RS09600;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=LDO45_RS09600;old_locus_tag=BDI4_1840003 NZ_CAJZAS010000095.1 Protein Homology CDS 2234 2566 . - 0 ID=cds-WP_223961254.1;Parent=gene-LDO45_RS09600;Dbxref=GenBank:WP_223961254.1;Name=WP_223961254.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408032.1;locus_tag=LDO45_RS09600;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_223961254.1;transl_table=11 NZ_CAJZAS010000095.1 RefSeq gene 2685 2996 . - . ID=gene-LDO45_RS09605;Name=flgA;end_range=2996,.;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=LDO45_RS09605;old_locus_tag=BDI4_1840004;partial=true NZ_CAJZAS010000095.1 Protein Homology CDS 2685 2996 . - 0 ID=cds-WP_223961256.1;Parent=gene-LDO45_RS09605;Dbxref=GenBank:WP_223961256.1;Name=WP_223961256.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;end_range=2996,.;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214311.1;locus_tag=LDO45_RS09605;partial=true;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_223961256.1;transl_table=11 ##sequence-region NZ_CAJZAS010000096.1 1 647 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000096.1 RefSeq region 1 647 . + . ID=NZ_CAJZAS010000096.1:1..647;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_185 NZ_CAJZAS010000096.1 RefSeq gene 1 639 . - . ID=gene-LDO45_RS34235;Name=LDO45_RS34235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34235;partial=true;start_range=.,1 NZ_CAJZAS010000096.1 GeneMarkS-2+ CDS 1 639 . - 0 ID=cds-WP_290371006.1;Parent=gene-LDO45_RS34235;Dbxref=GenBank:WP_290371006.1;Name=WP_290371006.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34235;partial=true;product=hypothetical protein;protein_id=WP_290371006.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAS010000097.1 1 1448 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000097.1 RefSeq region 1 1448 . + . ID=NZ_CAJZAS010000097.1:1..1448;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_186 NZ_CAJZAS010000097.1 RefSeq pseudogene 1 925 . - . ID=gene-LDO45_RS09615;Name=LDO45_RS09615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS09615;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000097.1 Protein Homology CDS 1 925 . - 0 ID=cds-LDO45_RS09615;Parent=gene-LDO45_RS09615;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing C-terminus;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA,ATP binding|0005524||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884423.1;locus_tag=LDO45_RS09615;partial=true;product=alanine--tRNA ligase-related protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000097.1 RefSeq pseudogene 1165 1448 . + . ID=gene-LDO45_RS09620;Name=LDO45_RS09620;end_range=1448,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS09620;partial=true;pseudo=true NZ_CAJZAS010000097.1 Protein Homology CDS 1165 1448 . + 0 ID=cds-LDO45_RS09620;Parent=gene-LDO45_RS09620;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing C-terminus;Ontology_term=GO:0003824,GO:0008410;end_range=1448,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA,CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754069.1;locus_tag=LDO45_RS09620;partial=true;product=CoA transferase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000098.1 1 7327 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000098.1 RefSeq region 1 7327 . + . ID=NZ_CAJZAS010000098.1:1..7327;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_187 NZ_CAJZAS010000098.1 RefSeq gene 1 569 . - . ID=gene-LDO45_RS09625;Name=LDO45_RS09625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09625;partial=true;start_range=.,1 NZ_CAJZAS010000098.1 Protein Homology CDS 1 569 . - 0 ID=cds-WP_253074732.1;Parent=gene-LDO45_RS09625;Dbxref=GenBank:WP_253074732.1;Name=WP_253074732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365959.1;locus_tag=LDO45_RS09625;partial=true;product=rhodanese-like domain-containing protein;protein_id=WP_253074732.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000098.1 RefSeq gene 693 1259 . - . ID=gene-LDO45_RS09630;Name=LDO45_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09630;old_locus_tag=BDI4_1870002 NZ_CAJZAS010000098.1 Protein Homology CDS 693 1259 . - 0 ID=cds-WP_223961258.1;Parent=gene-LDO45_RS09630;Dbxref=GenBank:WP_223961258.1;Name=WP_223961258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755516.1;locus_tag=LDO45_RS09630;product=cysteine dioxygenase;protein_id=WP_223961258.1;transl_table=11 NZ_CAJZAS010000098.1 RefSeq gene 1334 2257 . + . ID=gene-LDO45_RS09635;Name=LDO45_RS09635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09635;old_locus_tag=BDI4_1870003 NZ_CAJZAS010000098.1 Protein Homology CDS 1334 2257 . + 0 ID=cds-WP_223961259.1;Parent=gene-LDO45_RS09635;Dbxref=GenBank:WP_223961259.1;Name=WP_223961259.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899519.1;locus_tag=LDO45_RS09635;product=LysR family transcriptional regulator;protein_id=WP_223961259.1;transl_table=11 NZ_CAJZAS010000098.1 RefSeq gene 2319 3656 . - . ID=gene-LDO45_RS09640;Name=LDO45_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09640;old_locus_tag=BDI4_1870004 NZ_CAJZAS010000098.1 Protein Homology CDS 2319 3656 . - 0 ID=cds-WP_223961261.1;Parent=gene-LDO45_RS09640;Dbxref=GenBank:WP_223961261.1;Name=WP_223961261.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547820.1;locus_tag=LDO45_RS09640;product=acyl-CoA dehydrogenase family protein;protein_id=WP_223961261.1;transl_table=11 NZ_CAJZAS010000098.1 RefSeq pseudogene 4093 5107 . + . ID=gene-LDO45_RS09645;Name=LDO45_RS09645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS09645;old_locus_tag=BDI4_1870005;pseudo=true NZ_CAJZAS010000098.1 Protein Homology CDS 4093 5107 . + 0 ID=cds-LDO45_RS09645;Parent=gene-LDO45_RS09645;Note=frameshifted%3B too many ambiguous residues;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402355.1;locus_tag=LDO45_RS09645;product=LLM class flavin-dependent oxidoreductase;pseudo=true;transl_table=11 NZ_CAJZAS010000098.1 RefSeq gene 5128 5973 . + . ID=gene-LDO45_RS09650;Name=LDO45_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09650;old_locus_tag=BDI4_1870007 NZ_CAJZAS010000098.1 Protein Homology CDS 5128 5973 . + 0 ID=cds-WP_223961263.1;Parent=gene-LDO45_RS09650;Dbxref=GenBank:WP_223961263.1;Name=WP_223961263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402356.1;locus_tag=LDO45_RS09650;product=class II aldolase/adducin family protein;protein_id=WP_223961263.1;transl_table=11 NZ_CAJZAS010000098.1 RefSeq gene 6010 7044 . + . ID=gene-LDO45_RS09655;Name=LDO45_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09655;old_locus_tag=BDI4_1870008 NZ_CAJZAS010000098.1 Protein Homology CDS 6010 7044 . + 0 ID=cds-WP_059689977.1;Parent=gene-LDO45_RS09655;Dbxref=GenBank:WP_059689977.1;Name=WP_059689977.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365953.1;locus_tag=LDO45_RS09655;product=ABC transporter substrate-binding protein;protein_id=WP_059689977.1;transl_table=11 NZ_CAJZAS010000098.1 RefSeq pseudogene 7049 7327 . + . ID=gene-LDO45_RS09660;Name=LDO45_RS09660;end_range=7327,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS09660;partial=true;pseudo=true NZ_CAJZAS010000098.1 Protein Homology CDS 7049 7327 . + 0 ID=cds-LDO45_RS09660;Parent=gene-LDO45_RS09660;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=7327,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488659.1;locus_tag=LDO45_RS09660;partial=true;product=ABC transporter permease;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000099.1 1 16209 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000099.1 RefSeq region 1 16209 . + . ID=NZ_CAJZAS010000099.1:1..16209;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_188 NZ_CAJZAS010000099.1 RefSeq gene 1 249 . + . ID=gene-LDO45_RS09665;Name=LDO45_RS09665;end_range=249,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09665;old_locus_tag=BDI4_1880001;partial=true;start_range=.,1 NZ_CAJZAS010000099.1 Protein Homology CDS 1 249 . + 2 ID=cds-WP_223961264.1;Parent=gene-LDO45_RS09665;Dbxref=GenBank:WP_223961264.1;Name=WP_223961264.1;end_range=249,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700163.1;locus_tag=LDO45_RS09665;partial=true;product=hypothetical protein;protein_id=WP_223961264.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000099.1 RefSeq pseudogene 286 807 . + . ID=gene-LDO45_RS34520;Name=LDO45_RS34520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34520;old_locus_tag=BDI4_1880002;partial=true;pseudo=true;start_range=.,286 NZ_CAJZAS010000099.1 Protein Homology CDS 286 807 . + 0 ID=cds-LDO45_RS34520;Parent=gene-LDO45_RS34520;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013700163.1;locus_tag=LDO45_RS34520;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,286;transl_table=11 NZ_CAJZAS010000099.1 RefSeq gene 804 1061 . + . ID=gene-LDO45_RS09680;Name=LDO45_RS09680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09680;old_locus_tag=BDI4_1880003 NZ_CAJZAS010000099.1 GeneMarkS-2+ CDS 804 1061 . + 0 ID=cds-WP_223961266.1;Parent=gene-LDO45_RS09680;Dbxref=GenBank:WP_223961266.1;Name=WP_223961266.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS09680;product=hypothetical protein;protein_id=WP_223961266.1;transl_table=11 NZ_CAJZAS010000099.1 RefSeq pseudogene 1375 1521 . + . ID=gene-LDO45_RS09685;Name=LDO45_RS09685;end_range=1521,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS09685;partial=true;pseudo=true;start_range=.,1375 NZ_CAJZAS010000099.1 Protein Homology CDS 1375 1521 . + 0 ID=cds-LDO45_RS09685;Parent=gene-LDO45_RS09685;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1521,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722336.1;locus_tag=LDO45_RS09685;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,1375;transl_table=11 NZ_CAJZAS010000099.1 RefSeq gene 1516 1803 . + . ID=gene-LDO45_RS34525;Name=LDO45_RS34525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34525;old_locus_tag=BDI4_1880006 NZ_CAJZAS010000099.1 Protein Homology CDS 1516 1803 . + 0 ID=cds-WP_223961284.1;Parent=gene-LDO45_RS34525;Dbxref=GenBank:WP_223961284.1;Name=WP_223961284.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026873.5;locus_tag=LDO45_RS34525;product=polymorphic toxin type 37 domain-containing protein;protein_id=WP_223961284.1;transl_table=11 NZ_CAJZAS010000099.1 RefSeq gene 1807 2100 . + . ID=gene-LDO45_RS09695;Name=LDO45_RS09695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09695;old_locus_tag=BDI4_1880008 NZ_CAJZAS010000099.1 GeneMarkS-2+ CDS 1807 2100 . + 0 ID=cds-WP_223961268.1;Parent=gene-LDO45_RS09695;Dbxref=GenBank:WP_223961268.1;Name=WP_223961268.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS09695;product=hypothetical protein;protein_id=WP_223961268.1;transl_table=11 NZ_CAJZAS010000099.1 RefSeq gene 2651 3433 . - . ID=gene-LDO45_RS09700;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=LDO45_RS09700;old_locus_tag=BDI4_1880011 NZ_CAJZAS010000099.1 Protein Homology CDS 2651 3433 . - 0 ID=cds-WP_059691479.1;Parent=gene-LDO45_RS09700;Dbxref=GenBank:WP_059691479.1;Name=WP_059691479.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491278.1;locus_tag=LDO45_RS09700;product=flagellar biosynthetic protein FliR;protein_id=WP_059691479.1;transl_table=11 NZ_CAJZAS010000099.1 RefSeq gene 3462 3734 . - . ID=gene-LDO45_RS09705;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=LDO45_RS09705;old_locus_tag=BDI4_1880012 NZ_CAJZAS010000099.1 Protein Homology CDS 3462 3734 . - 0 ID=cds-WP_006750427.1;Parent=gene-LDO45_RS09705;Dbxref=GenBank:WP_006750427.1;Name=WP_006750427.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199882.1;locus_tag=LDO45_RS09705;product=flagellar biosynthesis protein FliQ;protein_id=WP_006750427.1;transl_table=11 NZ_CAJZAS010000099.1 RefSeq gene 3751 4512 . - . ID=gene-LDO45_RS09710;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=LDO45_RS09710;old_locus_tag=BDI4_1880013 NZ_CAJZAS010000099.1 Protein Homology CDS 3751 4512 . - 0 ID=cds-WP_223961270.1;Parent=gene-LDO45_RS09710;Dbxref=GenBank:WP_223961270.1;Name=WP_223961270.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011325008.1;locus_tag=LDO45_RS09710;product=flagellar type III secretion system pore protein FliP;protein_id=WP_223961270.1;transl_table=11 NZ_CAJZAS010000099.1 RefSeq gene 4549 5118 . - . ID=gene-LDO45_RS09715;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=LDO45_RS09715;old_locus_tag=BDI4_1880014 NZ_CAJZAS010000099.1 Protein Homology CDS 4549 5118 . - 0 ID=cds-WP_223961271.1;Parent=gene-LDO45_RS09715;Dbxref=GenBank:WP_223961271.1;Name=WP_223961271.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495402.1;locus_tag=LDO45_RS09715;product=flagellar biosynthetic protein FliO;protein_id=WP_223961271.1;transl_table=11 NZ_CAJZAS010000099.1 RefSeq gene 5115 5606 . - . ID=gene-LDO45_RS09720;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=LDO45_RS09720;old_locus_tag=BDI4_1880015 NZ_CAJZAS010000099.1 Protein Homology CDS 5115 5606 . - 0 ID=cds-WP_059531336.1;Parent=gene-LDO45_RS09720;Dbxref=GenBank:WP_059531336.1;Name=WP_059531336.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407291.1;locus_tag=LDO45_RS09720;product=flagellar motor switch protein FliN;protein_id=WP_059531336.1;transl_table=11 NZ_CAJZAS010000099.1 RefSeq gene 5599 6597 . - . ID=gene-LDO45_RS09725;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=LDO45_RS09725;old_locus_tag=BDI4_1880016 NZ_CAJZAS010000099.1 Protein Homology CDS 5599 6597 . - 0 ID=cds-WP_059531334.1;Parent=gene-LDO45_RS09725;Dbxref=GenBank:WP_059531334.1;Name=WP_059531334.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524547.1;locus_tag=LDO45_RS09725;product=flagellar motor switch protein FliM;protein_id=WP_059531334.1;transl_table=11 NZ_CAJZAS010000099.1 RefSeq gene 6620 7156 . - . ID=gene-LDO45_RS09730;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=LDO45_RS09730;old_locus_tag=BDI4_1880017 NZ_CAJZAS010000099.1 Protein Homology CDS 6620 7156 . - 0 ID=cds-WP_059531331.1;Parent=gene-LDO45_RS09730;Dbxref=GenBank:WP_059531331.1;Name=WP_059531331.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750432.1;locus_tag=LDO45_RS09730;product=flagellar basal body-associated protein FliL;protein_id=WP_059531331.1;transl_table=11 NZ_CAJZAS010000099.1 RefSeq gene 7336 8058 . - . ID=gene-LDO45_RS09735;Name=LDO45_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09735;old_locus_tag=BDI4_1880018 NZ_CAJZAS010000099.1 Protein Homology CDS 7336 8058 . - 0 ID=cds-WP_059531328.1;Parent=gene-LDO45_RS09735;Dbxref=GenBank:WP_059531328.1;Name=WP_059531328.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895445.1;locus_tag=LDO45_RS09735;product=LrgB family protein;protein_id=WP_059531328.1;transl_table=11 NZ_CAJZAS010000099.1 RefSeq gene 8072 8548 . - . ID=gene-LDO45_RS09740;Name=LDO45_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09740;old_locus_tag=BDI4_1880019 NZ_CAJZAS010000099.1 Protein Homology CDS 8072 8548 . - 0 ID=cds-WP_059531325.1;Parent=gene-LDO45_RS09740;Dbxref=GenBank:WP_059531325.1;Name=WP_059531325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757442.1;locus_tag=LDO45_RS09740;product=CidA/LrgA family protein;protein_id=WP_059531325.1;transl_table=11 NZ_CAJZAS010000099.1 RefSeq gene 8689 9615 . + . ID=gene-LDO45_RS09745;Name=LDO45_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09745;old_locus_tag=BDI4_1880021 NZ_CAJZAS010000099.1 Protein Homology CDS 8689 9615 . + 0 ID=cds-WP_059531322.1;Parent=gene-LDO45_RS09745;Dbxref=GenBank:WP_059531322.1;Name=WP_059531322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477236.1;locus_tag=LDO45_RS09745;product=LysR family transcriptional regulator;protein_id=WP_059531322.1;transl_table=11 NZ_CAJZAS010000099.1 RefSeq gene 9673 11235 . - . ID=gene-LDO45_RS09750;Name=LDO45_RS09750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09750;old_locus_tag=BDI4_1880022 NZ_CAJZAS010000099.1 Protein Homology CDS 9673 11235 . - 0 ID=cds-WP_223961273.1;Parent=gene-LDO45_RS09750;Dbxref=GenBank:WP_223961273.1;Name=WP_223961273.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416603.1;locus_tag=LDO45_RS09750;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_223961273.1;transl_table=11 NZ_CAJZAS010000099.1 RefSeq gene 11410 11898 . - . ID=gene-LDO45_RS09755;Name=LDO45_RS09755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09755;old_locus_tag=BDI4_1880023 NZ_CAJZAS010000099.1 Protein Homology CDS 11410 11898 . - 0 ID=cds-WP_059531315.1;Parent=gene-LDO45_RS09755;Dbxref=GenBank:WP_059531315.1;Name=WP_059531315.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895449.1;locus_tag=LDO45_RS09755;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_059531315.1;transl_table=11 NZ_CAJZAS010000099.1 RefSeq gene 12075 12359 . + . ID=gene-LDO45_RS09760;Name=LDO45_RS09760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09760;old_locus_tag=BDI4_1880024 NZ_CAJZAS010000099.1 Protein Homology CDS 12075 12359 . + 0 ID=cds-WP_082721891.1;Parent=gene-LDO45_RS09760;Dbxref=GenBank:WP_082721891.1;Name=WP_082721891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750438.1;locus_tag=LDO45_RS09760;product=multidrug ABC transporter ATPase;protein_id=WP_082721891.1;transl_table=11 NZ_CAJZAS010000099.1 RefSeq gene 12635 14173 . + . ID=gene-LDO45_RS09765;Name=LDO45_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09765;old_locus_tag=BDI4_1880025 NZ_CAJZAS010000099.1 Protein Homology CDS 12635 14173 . + 0 ID=cds-WP_223961275.1;Parent=gene-LDO45_RS09765;Dbxref=GenBank:WP_223961275.1;Name=WP_223961275.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544458.1;locus_tag=LDO45_RS09765;product=efflux transporter outer membrane subunit;protein_id=WP_223961275.1;transl_table=11 NZ_CAJZAS010000099.1 RefSeq gene 14211 14999 . - . ID=gene-LDO45_RS09770;Name=LDO45_RS09770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09770;old_locus_tag=BDI4_1880026 NZ_CAJZAS010000099.1 Protein Homology CDS 14211 14999 . - 0 ID=cds-WP_223961277.1;Parent=gene-LDO45_RS09770;Dbxref=GenBank:WP_223961277.1;Name=WP_223961277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750440.1;locus_tag=LDO45_RS09770;product=type II secretion system protein N;protein_id=WP_223961277.1;transl_table=11 NZ_CAJZAS010000099.1 RefSeq gene 15031 15537 . - . ID=gene-LDO45_RS09775;Name=gspM;gbkey=Gene;gene=gspM;gene_biotype=protein_coding;locus_tag=LDO45_RS09775;old_locus_tag=BDI4_1880027 NZ_CAJZAS010000099.1 Protein Homology CDS 15031 15537 . - 0 ID=cds-WP_059531425.1;Parent=gene-LDO45_RS09775;Dbxref=GenBank:WP_059531425.1;Name=WP_059531425.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspM;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411158.1;locus_tag=LDO45_RS09775;product=type II secretion system protein GspM;protein_id=WP_059531425.1;transl_table=11 NZ_CAJZAS010000099.1 RefSeq gene 15534 16209 . - . ID=gene-LDO45_RS09780;Name=gspL;end_range=16209,.;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=LDO45_RS09780;old_locus_tag=BDI4_1880028;partial=true NZ_CAJZAS010000099.1 Protein Homology CDS 15534 16209 . - 1 ID=cds-WP_223961279.1;Parent=gene-LDO45_RS09780;Dbxref=GenBank:WP_223961279.1;Name=WP_223961279.1;Ontology_term=GO:0015628,GO:0009276,GO:0015627;end_range=16209,.;gbkey=CDS;gene=gspL;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544455.1;locus_tag=LDO45_RS09780;partial=true;product=type II secretion system protein GspL;protein_id=WP_223961279.1;transl_table=11 ##sequence-region NZ_CAJZAS010000100.1 1 11444 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000100.1 RefSeq region 1 11444 . + . ID=NZ_CAJZAS010000100.1:1..11444;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_189 NZ_CAJZAS010000100.1 RefSeq gene 1 943 . + . ID=gene-LDO45_RS09785;Name=LDO45_RS09785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09785;old_locus_tag=BDI4_1890001;partial=true;start_range=.,1 NZ_CAJZAS010000100.1 Protein Homology CDS 1 943 . + 1 ID=cds-WP_223961286.1;Parent=gene-LDO45_RS09785;Dbxref=GenBank:WP_223961286.1;Name=WP_223961286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409335.1;locus_tag=LDO45_RS09785;partial=true;product=SidA/IucD/PvdA family monooxygenase;protein_id=WP_223961286.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000100.1 RefSeq gene 990 3242 . + . ID=gene-LDO45_RS09790;Name=LDO45_RS09790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09790;old_locus_tag=BDI4_1890002 NZ_CAJZAS010000100.1 Protein Homology CDS 990 3242 . + 0 ID=cds-WP_223961288.1;Parent=gene-LDO45_RS09790;Dbxref=GenBank:WP_223961288.1;Name=WP_223961288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404834.1;locus_tag=LDO45_RS09790;product=TonB-dependent siderophore receptor;protein_id=WP_223961288.1;transl_table=11 NZ_CAJZAS010000100.1 RefSeq gene 3330 4169 . + . ID=gene-LDO45_RS09795;Name=LDO45_RS09795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09795;old_locus_tag=BDI4_1890003 NZ_CAJZAS010000100.1 Protein Homology CDS 3330 4169 . + 0 ID=cds-WP_223961290.1;Parent=gene-LDO45_RS09795;Dbxref=GenBank:WP_223961290.1;Name=WP_223961290.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213359.1;locus_tag=LDO45_RS09795;product=formyltransferase family protein;protein_id=WP_223961290.1;transl_table=11 NZ_CAJZAS010000100.1 RefSeq gene 4169 5188 . + . ID=gene-LDO45_RS09800;Name=LDO45_RS09800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09800;old_locus_tag=BDI4_1890004 NZ_CAJZAS010000100.1 Protein Homology CDS 4169 5188 . + 0 ID=cds-WP_059701220.1;Parent=gene-LDO45_RS09800;Dbxref=GenBank:WP_059701220.1;Name=WP_059701220.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328462.1;locus_tag=LDO45_RS09800;product=GNAT family N-acetyltransferase;protein_id=WP_059701220.1;transl_table=11 NZ_CAJZAS010000100.1 RefSeq gene 5234 6139 . - . ID=gene-LDO45_RS09805;Name=LDO45_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09805;old_locus_tag=BDI4_1890005 NZ_CAJZAS010000100.1 Protein Homology CDS 5234 6139 . - 0 ID=cds-WP_223961293.1;Parent=gene-LDO45_RS09805;Dbxref=GenBank:WP_223961293.1;Name=WP_223961293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328463.1;locus_tag=LDO45_RS09805;product=nucleotidyl transferase AbiEii/AbiGii toxin family protein;protein_id=WP_223961293.1;transl_table=11 NZ_CAJZAS010000100.1 RefSeq gene 6108 7175 . - . ID=gene-LDO45_RS09810;Name=LDO45_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09810;old_locus_tag=BDI4_1890006 NZ_CAJZAS010000100.1 Protein Homology CDS 6108 7175 . - 0 ID=cds-WP_223961294.1;Parent=gene-LDO45_RS09810;Dbxref=GenBank:WP_223961294.1;Name=WP_223961294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897058.1;locus_tag=LDO45_RS09810;product=type IV toxin-antitoxin system AbiEi family antitoxin;protein_id=WP_223961294.1;transl_table=11 NZ_CAJZAS010000100.1 RefSeq gene 7542 8705 . + . ID=gene-LDO45_RS09815;Name=LDO45_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09815;old_locus_tag=BDI4_1890007 NZ_CAJZAS010000100.1 Protein Homology CDS 7542 8705 . + 0 ID=cds-WP_223961296.1;Parent=gene-LDO45_RS09815;Dbxref=GenBank:WP_223961296.1;Name=WP_223961296.1;Ontology_term=GO:0016787,GO:0016810;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013089043.1;locus_tag=LDO45_RS09815;product=M20 aminoacylase family protein;protein_id=WP_223961296.1;transl_table=11 NZ_CAJZAS010000100.1 RefSeq gene 8876 9415 . + . ID=gene-LDO45_RS09820;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=LDO45_RS09820;old_locus_tag=BDI4_1890008 NZ_CAJZAS010000100.1 Protein Homology CDS 8876 9415 . + 0 ID=cds-WP_223961298.1;Parent=gene-LDO45_RS09820;Dbxref=GenBank:WP_223961298.1;Name=WP_223961298.1;Ontology_term=GO:0019867;gbkey=CDS;gene=bamE;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897056.1;locus_tag=LDO45_RS09820;product=outer membrane protein assembly factor BamE;protein_id=WP_223961298.1;transl_table=11 NZ_CAJZAS010000100.1 RefSeq gene 9440 10744 . - . ID=gene-LDO45_RS09825;Name=LDO45_RS09825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09825;old_locus_tag=BDI4_1890009 NZ_CAJZAS010000100.1 Protein Homology CDS 9440 10744 . - 0 ID=cds-WP_223961300.1;Parent=gene-LDO45_RS09825;Dbxref=GenBank:WP_223961300.1;Name=WP_223961300.1;Ontology_term=GO:0042242;gbkey=CDS;go_function=cobyrinic acid a%2Cc-diamide synthase activity|0042242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496450.1;locus_tag=LDO45_RS09825;product=cobyrinate a%2Cc-diamide synthase;protein_id=WP_223961300.1;transl_table=11 NZ_CAJZAS010000100.1 RefSeq pseudogene 10748 11294 . - . ID=gene-LDO45_RS09830;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=pseudogene;locus_tag=LDO45_RS09830;pseudo=true NZ_CAJZAS010000100.1 Protein Homology CDS 10748 11294 . - 0 ID=cds-LDO45_RS09830;Parent=gene-LDO45_RS09830;Note=frameshifted%3B too many ambiguous residues;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006682944.1;locus_tag=LDO45_RS09830;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;pseudo=true;transl_table=11 NZ_CAJZAS010000100.1 RefSeq gene 11329 11444 . - . ID=gene-LDO45_RS09835;Name=LDO45_RS09835;end_range=11444,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09835;old_locus_tag=BDI4_1890012;partial=true NZ_CAJZAS010000100.1 Protein Homology CDS 11329 11444 . - 2 ID=cds-WP_223961302.1;Parent=gene-LDO45_RS09835;Dbxref=GenBank:WP_223961302.1;Name=WP_223961302.1;Ontology_term=GO:0009236;end_range=11444,.;gbkey=CDS;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004546528.1;locus_tag=LDO45_RS09835;partial=true;product=cobalamin biosynthesis protein;protein_id=WP_223961302.1;transl_table=11 ##sequence-region NZ_CAJZAS010000101.1 1 124196 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000101.1 RefSeq region 1 124196 . + . ID=NZ_CAJZAS010000101.1:1..124196;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_19 NZ_CAJZAS010000101.1 RefSeq gene 1 1099 . + . ID=gene-LDO45_RS09840;Name=LDO45_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09840;old_locus_tag=BDI4_190001;partial=true;start_range=.,1 NZ_CAJZAS010000101.1 Protein Homology CDS 1 1099 . + 1 ID=cds-WP_223961304.1;Parent=gene-LDO45_RS09840;Dbxref=GenBank:WP_223961304.1;Name=WP_223961304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011401085.1;locus_tag=LDO45_RS09840;partial=true;product=YadA-like family protein;protein_id=WP_223961304.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 1230 1895 . + . ID=gene-LDO45_RS09845;Name=LDO45_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09845;old_locus_tag=BDI4_190002 NZ_CAJZAS010000101.1 Protein Homology CDS 1230 1895 . + 0 ID=cds-WP_223961306.1;Parent=gene-LDO45_RS09845;Dbxref=GenBank:WP_223961306.1;Name=WP_223961306.1;Ontology_term=GO:0015288,GO:0042834;gbkey=CDS;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366802.1;locus_tag=LDO45_RS09845;product=OmpA family protein;protein_id=WP_223961306.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq pseudogene 2073 2514 . + . ID=gene-LDO45_RS09850;Name=LDO45_RS09850;end_range=2514,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS09850;partial=true;pseudo=true;start_range=.,2073 NZ_CAJZAS010000101.1 Protein Homology CDS 2073 2514 . + 0 ID=cds-LDO45_RS09850;Parent=gene-LDO45_RS09850;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0007165,GO:0000155;end_range=2514,.;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725985.1;locus_tag=LDO45_RS09850;partial=true;product=histidine kinase dimerization/phospho-acceptor domain-containing protein;pseudo=true;start_range=.,2073;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 3244 3828 . - . ID=gene-LDO45_RS09855;Name=LDO45_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09855;old_locus_tag=BDI4_190007 NZ_CAJZAS010000101.1 Protein Homology CDS 3244 3828 . - 0 ID=cds-WP_253074733.1;Parent=gene-LDO45_RS09855;Dbxref=GenBank:WP_253074733.1;Name=WP_253074733.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013015.5;locus_tag=LDO45_RS09855;product=S24 family peptidase;protein_id=WP_253074733.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 3965 4231 . - . ID=gene-LDO45_RS09860;Name=LDO45_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09860;old_locus_tag=BDI4_190008 NZ_CAJZAS010000101.1 GeneMarkS-2+ CDS 3965 4231 . - 0 ID=cds-WP_223961308.1;Parent=gene-LDO45_RS09860;Dbxref=GenBank:WP_223961308.1;Name=WP_223961308.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS09860;product=hypothetical protein;protein_id=WP_223961308.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 4326 4562 . - . ID=gene-LDO45_RS09865;Name=LDO45_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09865 NZ_CAJZAS010000101.1 GeneMarkS-2+ CDS 4326 4562 . - 0 ID=cds-WP_223961309.1;Parent=gene-LDO45_RS09865;Dbxref=GenBank:WP_223961309.1;Name=WP_223961309.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS09865;product=hypothetical protein;protein_id=WP_223961309.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 4586 5572 . - . ID=gene-LDO45_RS09870;Name=LDO45_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09870;old_locus_tag=BDI4_190010 NZ_CAJZAS010000101.1 GeneMarkS-2+ CDS 4586 5572 . - 0 ID=cds-WP_223961311.1;Parent=gene-LDO45_RS09870;Dbxref=GenBank:WP_223961311.1;Name=WP_223961311.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS09870;product=hypothetical protein;protein_id=WP_223961311.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 5709 6302 . - . ID=gene-LDO45_RS09875;Name=LDO45_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09875;old_locus_tag=BDI4_190011 NZ_CAJZAS010000101.1 Protein Homology CDS 5709 6302 . - 0 ID=cds-WP_223961313.1;Parent=gene-LDO45_RS09875;Dbxref=GenBank:WP_223961313.1;Name=WP_223961313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019717971.1;locus_tag=LDO45_RS09875;product=lipase family protein;protein_id=WP_223961313.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 6624 6926 . - . ID=gene-LDO45_RS09880;Name=LDO45_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09880;old_locus_tag=BDI4_190012 NZ_CAJZAS010000101.1 GeneMarkS-2+ CDS 6624 6926 . - 0 ID=cds-WP_223961315.1;Parent=gene-LDO45_RS09880;Dbxref=GenBank:WP_223961315.1;Name=WP_223961315.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS09880;product=hypothetical protein;protein_id=WP_223961315.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 6935 7549 . - . ID=gene-LDO45_RS09885;Name=LDO45_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09885;old_locus_tag=BDI4_190013 NZ_CAJZAS010000101.1 Protein Homology CDS 6935 7549 . - 0 ID=cds-WP_223961317.1;Parent=gene-LDO45_RS09885;Dbxref=GenBank:WP_223961317.1;Name=WP_223961317.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013954.5;locus_tag=LDO45_RS09885;product=glycoside hydrolase family 73 protein;protein_id=WP_223961317.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 7539 7790 . - . ID=gene-LDO45_RS09890;Name=LDO45_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09890;old_locus_tag=BDI4_190014 NZ_CAJZAS010000101.1 GeneMarkS-2+ CDS 7539 7790 . - 0 ID=cds-WP_223961319.1;Parent=gene-LDO45_RS09890;Dbxref=GenBank:WP_223961319.1;Name=WP_223961319.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS09890;product=hypothetical protein;protein_id=WP_223961319.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 7988 8527 . - . ID=gene-LDO45_RS09895;Name=LDO45_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09895;old_locus_tag=BDI4_190015 NZ_CAJZAS010000101.1 Protein Homology CDS 7988 8527 . - 0 ID=cds-WP_223961321.1;Parent=gene-LDO45_RS09895;Dbxref=GenBank:WP_223961321.1;Name=WP_223961321.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: protein motif:HMM:NF013460.5;locus_tag=LDO45_RS09895;product=cytochrome b;protein_id=WP_223961321.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 8716 9048 . - . ID=gene-LDO45_RS09900;Name=LDO45_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09900;old_locus_tag=BDI4_190017 NZ_CAJZAS010000101.1 GeneMarkS-2+ CDS 8716 9048 . - 0 ID=cds-WP_223961323.1;Parent=gene-LDO45_RS09900;Dbxref=GenBank:WP_223961323.1;Name=WP_223961323.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS09900;product=hypothetical protein;protein_id=WP_223961323.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 9049 9888 . + . ID=gene-LDO45_RS09905;Name=LDO45_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09905;old_locus_tag=BDI4_190016 NZ_CAJZAS010000101.1 Protein Homology CDS 9049 9888 . + 0 ID=cds-WP_223961325.1;Parent=gene-LDO45_RS09905;Dbxref=GenBank:WP_223961325.1;Name=WP_223961325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751117.1;locus_tag=LDO45_RS09905;product=polysaccharide deacetylase;protein_id=WP_223961325.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 9885 11291 . + . ID=gene-LDO45_RS09910;Name=LDO45_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09910;old_locus_tag=BDI4_190018 NZ_CAJZAS010000101.1 Protein Homology CDS 9885 11291 . + 0 ID=cds-WP_223961327.1;Parent=gene-LDO45_RS09910;Dbxref=GenBank:WP_223961327.1;Name=WP_223961327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661333.1;locus_tag=LDO45_RS09910;product=MmgE/PrpD family protein;protein_id=WP_223961327.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 11446 13011 . + . ID=gene-LDO45_RS09915;Name=LDO45_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09915;old_locus_tag=BDI4_190019 NZ_CAJZAS010000101.1 Protein Homology CDS 11446 13011 . + 0 ID=cds-WP_223961330.1;Parent=gene-LDO45_RS09915;Dbxref=GenBank:WP_223961330.1;Name=WP_223961330.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880340.1;locus_tag=LDO45_RS09915;product=methyl-accepting chemotaxis protein;protein_id=WP_223961330.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 13098 14111 . + . ID=gene-LDO45_RS09920;Name=LDO45_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09920;old_locus_tag=BDI4_190020 NZ_CAJZAS010000101.1 Protein Homology CDS 13098 14111 . + 0 ID=cds-WP_223961331.1;Parent=gene-LDO45_RS09920;Dbxref=GenBank:WP_223961331.1;Name=WP_223961331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363507.1;locus_tag=LDO45_RS09920;product=porin family protein;protein_id=WP_223961331.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 14419 15417 . - . ID=gene-LDO45_RS09925;Name=LDO45_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09925;old_locus_tag=BDI4_190022 NZ_CAJZAS010000101.1 Protein Homology CDS 14419 15417 . - 0 ID=cds-WP_059536367.1;Parent=gene-LDO45_RS09925;Dbxref=GenBank:WP_059536367.1;Name=WP_059536367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758215.1;locus_tag=LDO45_RS09925;product=ABC transporter substrate-binding protein;protein_id=WP_059536367.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 15484 15828 . - . ID=gene-LDO45_RS09930;Name=LDO45_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09930;old_locus_tag=BDI4_190024 NZ_CAJZAS010000101.1 Protein Homology CDS 15484 15828 . - 0 ID=cds-WP_059536364.1;Parent=gene-LDO45_RS09930;Dbxref=GenBank:WP_059536364.1;Name=WP_059536364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545446.1;locus_tag=LDO45_RS09930;product=DUF3088 domain-containing protein;protein_id=WP_059536364.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 15924 16313 . - . ID=gene-LDO45_RS09935;Name=LDO45_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09935 NZ_CAJZAS010000101.1 GeneMarkS-2+ CDS 15924 16313 . - 0 ID=cds-WP_156437207.1;Parent=gene-LDO45_RS09935;Dbxref=GenBank:WP_156437207.1;Name=WP_156437207.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS09935;product=hypothetical protein;protein_id=WP_156437207.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 16312 17496 . + . ID=gene-LDO45_RS09940;Name=LDO45_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09940;old_locus_tag=BDI4_190025 NZ_CAJZAS010000101.1 Protein Homology CDS 16312 17496 . + 0 ID=cds-WP_059536358.1;Parent=gene-LDO45_RS09940;Dbxref=GenBank:WP_059536358.1;Name=WP_059536358.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336737.1;locus_tag=LDO45_RS09940;product=porin;protein_id=WP_059536358.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 17629 18888 . + . ID=gene-LDO45_RS09945;Name=soxC;gbkey=Gene;gene=soxC;gene_biotype=protein_coding;locus_tag=LDO45_RS09945;old_locus_tag=BDI4_190026 NZ_CAJZAS010000101.1 Protein Homology CDS 17629 18888 . + 0 ID=cds-WP_223961333.1;Parent=gene-LDO45_RS09945;Dbxref=GenBank:WP_223961333.1;Name=WP_223961333.1;Ontology_term=GO:0016491,GO:0030151;gbkey=CDS;gene=soxC;go_function=oxidoreductase activity|0016491||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751976.1;locus_tag=LDO45_RS09945;product=sulfite dehydrogenase;protein_id=WP_223961333.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 18881 19429 . + . ID=gene-LDO45_RS09950;Name=LDO45_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09950;old_locus_tag=BDI4_190027 NZ_CAJZAS010000101.1 Protein Homology CDS 18881 19429 . + 0 ID=cds-WP_223961336.1;Parent=gene-LDO45_RS09950;Dbxref=GenBank:WP_223961336.1;Name=WP_223961336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336735.1;locus_tag=LDO45_RS09950;product=c-type cytochrome;protein_id=WP_223961336.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 19527 20738 . + . ID=gene-LDO45_RS09955;Name=LDO45_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09955;old_locus_tag=BDI4_190028 NZ_CAJZAS010000101.1 Protein Homology CDS 19527 20738 . + 0 ID=cds-WP_223961338.1;Parent=gene-LDO45_RS09955;Dbxref=GenBank:WP_223961338.1;Name=WP_223961338.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029560.1;locus_tag=LDO45_RS09955;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_223961338.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 20741 22129 . - . ID=gene-LDO45_RS09960;Name=LDO45_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09960;old_locus_tag=BDI4_190029 NZ_CAJZAS010000101.1 Protein Homology CDS 20741 22129 . - 0 ID=cds-WP_223961341.1;Parent=gene-LDO45_RS09960;Dbxref=GenBank:WP_223961341.1;Name=WP_223961341.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020202729.1;locus_tag=LDO45_RS09960;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_223961341.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq pseudogene 22169 23385 . - . ID=gene-LDO45_RS09965;Name=LDO45_RS09965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS09965;old_locus_tag=BDI4_190031;pseudo=true NZ_CAJZAS010000101.1 Protein Homology CDS 22169 23385 . - 0 ID=cds-LDO45_RS09965;Parent=gene-LDO45_RS09965;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349769.1;locus_tag=LDO45_RS09965;product=acyl-CoA dehydrogenase family protein;pseudo=true;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 23561 24448 . - . ID=gene-LDO45_RS09970;Name=LDO45_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09970;old_locus_tag=BDI4_190032 NZ_CAJZAS010000101.1 Protein Homology CDS 23561 24448 . - 0 ID=cds-WP_223961343.1;Parent=gene-LDO45_RS09970;Dbxref=GenBank:WP_223961343.1;Name=WP_223961343.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481264.1;locus_tag=LDO45_RS09970;product=ABC transporter permease;protein_id=WP_223961343.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 24445 25434 . - . ID=gene-LDO45_RS09975;Name=LDO45_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09975;old_locus_tag=BDI4_190033 NZ_CAJZAS010000101.1 Protein Homology CDS 24445 25434 . - 0 ID=cds-WP_059690543.1;Parent=gene-LDO45_RS09975;Dbxref=GenBank:WP_059690543.1;Name=WP_059690543.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545453.1;locus_tag=LDO45_RS09975;product=ABC transporter ATP-binding protein;protein_id=WP_059690543.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 25502 26533 . - . ID=gene-LDO45_RS09980;Name=LDO45_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09980;old_locus_tag=BDI4_190034 NZ_CAJZAS010000101.1 Protein Homology CDS 25502 26533 . - 0 ID=cds-WP_223961345.1;Parent=gene-LDO45_RS09980;Dbxref=GenBank:WP_223961345.1;Name=WP_223961345.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410174.1;locus_tag=LDO45_RS09980;product=ABC transporter substrate-binding protein;protein_id=WP_223961345.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 26581 27507 . - . ID=gene-LDO45_RS09985;Name=LDO45_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09985;old_locus_tag=BDI4_190035 NZ_CAJZAS010000101.1 Protein Homology CDS 26581 27507 . - 0 ID=cds-WP_223961347.1;Parent=gene-LDO45_RS09985;Dbxref=GenBank:WP_223961347.1;Name=WP_223961347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752883.1;locus_tag=LDO45_RS09985;product=TauD/TfdA family dioxygenase;protein_id=WP_223961347.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 27658 29040 . - . ID=gene-LDO45_RS09990;Name=LDO45_RS09990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09990;old_locus_tag=BDI4_190036 NZ_CAJZAS010000101.1 Protein Homology CDS 27658 29040 . - 0 ID=cds-WP_223961350.1;Parent=gene-LDO45_RS09990;Dbxref=GenBank:WP_223961350.1;Name=WP_223961350.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604101.1;locus_tag=LDO45_RS09990;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_223961350.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 29067 29834 . - . ID=gene-LDO45_RS09995;Name=LDO45_RS09995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS09995;old_locus_tag=BDI4_190037 NZ_CAJZAS010000101.1 Protein Homology CDS 29067 29834 . - 0 ID=cds-WP_059536322.1;Parent=gene-LDO45_RS09995;Dbxref=GenBank:WP_059536322.1;Name=WP_059536322.1;Note=The N-terminal region of this protein%2C as described by TIGR01726%2C is a three transmembrane segment that identifies a subfamily of ABC transporter permease subunits%2C which specificities that include histidine%2C arginine%2C glutamine%2C glutamate%2C L-cystine (sic)%2C the opines (in Agrobacterium) octopine and nopaline%2C etc.;Ontology_term=GO:0015837,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=amine transport|0015837||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725212.1;locus_tag=LDO45_RS09995;product=ABC transporter permease subunit;protein_id=WP_059536322.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 29831 30565 . - . ID=gene-LDO45_RS10000;Name=LDO45_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10000;old_locus_tag=BDI4_190038 NZ_CAJZAS010000101.1 Protein Homology CDS 29831 30565 . - 0 ID=cds-WP_223961352.1;Parent=gene-LDO45_RS10000;Dbxref=GenBank:WP_223961352.1;Name=WP_223961352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092711.1;locus_tag=LDO45_RS10000;product=ABC transporter permease;protein_id=WP_223961352.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 30570 31373 . - . ID=gene-LDO45_RS10005;Name=LDO45_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10005;old_locus_tag=BDI4_190039 NZ_CAJZAS010000101.1 Protein Homology CDS 30570 31373 . - 0 ID=cds-WP_308051204.1;Parent=gene-LDO45_RS10005;Dbxref=GenBank:WP_308051204.1;Name=WP_308051204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603116.1;locus_tag=LDO45_RS10005;product=transporter substrate-binding domain-containing protein;protein_id=WP_308051204.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 32097 35039 . - . ID=gene-LDO45_RS10010;Name=LDO45_RS10010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10010;old_locus_tag=BDI4_190041 NZ_CAJZAS010000101.1 Protein Homology CDS 32097 35039 . - 0 ID=cds-WP_223961356.1;Parent=gene-LDO45_RS10010;Dbxref=GenBank:WP_223961356.1;Name=WP_223961356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405762.1;locus_tag=LDO45_RS10010;product=sensor histidine kinase;protein_id=WP_223961356.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 35123 35785 . - . ID=gene-LDO45_RS10015;Name=LDO45_RS10015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10015;old_locus_tag=BDI4_190042 NZ_CAJZAS010000101.1 Protein Homology CDS 35123 35785 . - 0 ID=cds-WP_223961462.1;Parent=gene-LDO45_RS10015;Dbxref=GenBank:WP_223961462.1;Name=WP_223961462.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494722.1;locus_tag=LDO45_RS10015;product=response regulator;protein_id=WP_223961462.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq pseudogene 35929 36479 . - . ID=gene-LDO45_RS34530;Name=LDO45_RS34530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34530;pseudo=true NZ_CAJZAS010000101.1 Protein Homology CDS 35929 36479 . - 0 ID=cds-LDO45_RS34530;Parent=gene-LDO45_RS34530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025320.5;locus_tag=LDO45_RS34530;product=FimD/PapC N-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 36602 37279 . - . ID=gene-LDO45_RS10025;Name=LDO45_RS10025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10025;old_locus_tag=BDI4_190045 NZ_CAJZAS010000101.1 Protein Homology CDS 36602 37279 . - 0 ID=cds-WP_059536295.1;Parent=gene-LDO45_RS10025;Dbxref=GenBank:WP_059536295.1;Name=WP_059536295.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367304.1;locus_tag=LDO45_RS10025;product=response regulator transcription factor;protein_id=WP_059536295.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 37827 39197 . + . ID=gene-LDO45_RS10030;Name=LDO45_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10030;old_locus_tag=BDI4_190049 NZ_CAJZAS010000101.1 Protein Homology CDS 37827 39197 . + 0 ID=cds-WP_223961358.1;Parent=gene-LDO45_RS10030;Dbxref=GenBank:WP_223961358.1;Name=WP_223961358.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349785.1;locus_tag=LDO45_RS10030;product=MFS transporter;protein_id=WP_223961358.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 39210 41966 . - . ID=gene-LDO45_RS10035;Name=LDO45_RS10035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10035;old_locus_tag=BDI4_190050 NZ_CAJZAS010000101.1 Protein Homology CDS 39210 41966 . - 0 ID=cds-WP_223961359.1;Parent=gene-LDO45_RS10035;Dbxref=GenBank:WP_223961359.1;Name=WP_223961359.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018311068.1;locus_tag=LDO45_RS10035;product=UPF0182 family protein;protein_id=WP_223961359.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 42291 42710 . + . ID=gene-LDO45_RS10040;Name=LDO45_RS10040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10040;old_locus_tag=BDI4_190051 NZ_CAJZAS010000101.1 Protein Homology CDS 42291 42710 . + 0 ID=cds-WP_059536288.1;Parent=gene-LDO45_RS10040;Dbxref=GenBank:WP_059536288.1;Name=WP_059536288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014006878.1;locus_tag=LDO45_RS10040;product=DUF1810 domain-containing protein;protein_id=WP_059536288.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 42766 43080 . + . ID=gene-LDO45_RS10045;Name=LDO45_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10045;old_locus_tag=BDI4_190052 NZ_CAJZAS010000101.1 Protein Homology CDS 42766 43080 . + 0 ID=cds-WP_223961360.1;Parent=gene-LDO45_RS10045;Dbxref=GenBank:WP_223961360.1;Name=WP_223961360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481895.1;locus_tag=LDO45_RS10045;product=helicase;protein_id=WP_223961360.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 43601 43894 . - . ID=gene-LDO45_RS10055;Name=LDO45_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10055 NZ_CAJZAS010000101.1 Protein Homology CDS 43601 43894 . - 0 ID=cds-WP_059690532.1;Parent=gene-LDO45_RS10055;Dbxref=GenBank:WP_059690532.1;Name=WP_059690532.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492757.1;locus_tag=LDO45_RS10055;product=H-NS histone family protein;protein_id=WP_059690532.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 44289 44966 . - . ID=gene-LDO45_RS10060;Name=LDO45_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10060;old_locus_tag=BDI4_190055 NZ_CAJZAS010000101.1 Protein Homology CDS 44289 44966 . - 0 ID=cds-WP_290371008.1;Parent=gene-LDO45_RS10060;Dbxref=GenBank:WP_290371008.1;Name=WP_290371008.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367298.1;locus_tag=LDO45_RS10060;product=response regulator transcription factor;protein_id=WP_290371008.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 45317 47740 . + . ID=gene-LDO45_RS10065;Name=LDO45_RS10065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10065;old_locus_tag=BDI4_190056 NZ_CAJZAS010000101.1 Protein Homology CDS 45317 47740 . + 0 ID=cds-WP_290371009.1;Parent=gene-LDO45_RS10065;Dbxref=GenBank:WP_290371009.1;Name=WP_290371009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367299.1;locus_tag=LDO45_RS10065;product=ATP-binding protein;protein_id=WP_290371009.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 47743 49899 . - . ID=gene-LDO45_RS10070;Name=LDO45_RS10070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10070;old_locus_tag=BDI4_190057 NZ_CAJZAS010000101.1 Protein Homology CDS 47743 49899 . - 0 ID=cds-WP_290371010.1;Parent=gene-LDO45_RS10070;Dbxref=GenBank:WP_290371010.1;Name=WP_290371010.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493131.1;locus_tag=LDO45_RS10070;product=ATP-binding protein;protein_id=WP_290371010.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 50762 51499 . - . ID=gene-LDO45_RS10075;Name=LDO45_RS10075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10075;old_locus_tag=BDI4_190060 NZ_CAJZAS010000101.1 GeneMarkS-2+ CDS 50762 51499 . - 0 ID=cds-WP_223961363.1;Parent=gene-LDO45_RS10075;Dbxref=GenBank:WP_223961363.1;Name=WP_223961363.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS10075;product=hypothetical protein;protein_id=WP_223961363.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 51678 54353 . - . ID=gene-LDO45_RS10080;Name=LDO45_RS10080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10080;old_locus_tag=BDI4_190061 NZ_CAJZAS010000101.1 Protein Homology CDS 51678 54353 . - 0 ID=cds-WP_223961364.1;Parent=gene-LDO45_RS10080;Dbxref=GenBank:WP_223961364.1;Name=WP_223961364.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027306.5;locus_tag=LDO45_RS10080;product=TcfC E-set like domain-containing protein;protein_id=WP_223961364.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 54406 55113 . - . ID=gene-LDO45_RS10085;Name=LDO45_RS10085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10085;old_locus_tag=BDI4_190062 NZ_CAJZAS010000101.1 Protein Homology CDS 54406 55113 . - 0 ID=cds-WP_223961365.1;Parent=gene-LDO45_RS10085;Dbxref=GenBank:WP_223961365.1;Name=WP_223961365.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: protein motif:HMM:NF012565.5;locus_tag=LDO45_RS10085;product=fimbria/pilus periplasmic chaperone;protein_id=WP_223961365.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 55226 55879 . - . ID=gene-LDO45_RS10090;Name=LDO45_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10090;old_locus_tag=BDI4_190063 NZ_CAJZAS010000101.1 Protein Homology CDS 55226 55879 . - 0 ID=cds-WP_059536252.1;Parent=gene-LDO45_RS10090;Dbxref=GenBank:WP_059536252.1;Name=WP_059536252.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027764.5;locus_tag=LDO45_RS10090;product=common pilus major fimbrillin subunit EcpA;protein_id=WP_059536252.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 56022 56474 . - . ID=gene-LDO45_RS10095;Name=LDO45_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10095;old_locus_tag=BDI4_190064 NZ_CAJZAS010000101.1 GeneMarkS-2+ CDS 56022 56474 . - 0 ID=cds-WP_223961366.1;Parent=gene-LDO45_RS10095;Dbxref=GenBank:WP_223961366.1;Name=WP_223961366.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS10095;product=hypothetical protein;protein_id=WP_223961366.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 56979 58607 . + . ID=gene-LDO45_RS10100;Name=LDO45_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10100;old_locus_tag=BDI4_190066 NZ_CAJZAS010000101.1 GeneMarkS-2+ CDS 56979 58607 . + 0 ID=cds-WP_223961368.1;Parent=gene-LDO45_RS10100;Dbxref=GenBank:WP_223961368.1;Name=WP_223961368.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS10100;product=hypothetical protein;protein_id=WP_223961368.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 59079 59372 . + . ID=gene-LDO45_RS10105;Name=LDO45_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10105;old_locus_tag=BDI4_190068 NZ_CAJZAS010000101.1 GeneMarkS-2+ CDS 59079 59372 . + 0 ID=cds-WP_223961370.1;Parent=gene-LDO45_RS10105;Dbxref=GenBank:WP_223961370.1;Name=WP_223961370.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS10105;product=hypothetical protein;protein_id=WP_223961370.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 59577 59753 . - . ID=gene-LDO45_RS10110;Name=LDO45_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10110;old_locus_tag=BDI4_190070 NZ_CAJZAS010000101.1 Protein Homology CDS 59577 59753 . - 0 ID=cds-WP_223961372.1;Parent=gene-LDO45_RS10110;Dbxref=GenBank:WP_223961372.1;Name=WP_223961372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365726.1;locus_tag=LDO45_RS10110;product=CsbD family protein;protein_id=WP_223961372.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 59985 60131 . + . ID=gene-LDO45_RS10115;Name=LDO45_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10115;old_locus_tag=BDI4_190071 NZ_CAJZAS010000101.1 Protein Homology CDS 59985 60131 . + 0 ID=cds-WP_081053095.1;Parent=gene-LDO45_RS10115;Dbxref=GenBank:WP_081053095.1;Name=WP_081053095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328534.1;locus_tag=LDO45_RS10115;product=DUF3096 domain-containing protein;protein_id=WP_081053095.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 60804 61103 . + . ID=gene-LDO45_RS10120;Name=LDO45_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10120;old_locus_tag=BDI4_190073 NZ_CAJZAS010000101.1 Protein Homology CDS 60804 61103 . + 0 ID=cds-WP_223961466.1;Parent=gene-LDO45_RS10120;Dbxref=GenBank:WP_223961466.1;Name=WP_223961466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761448.1;locus_tag=LDO45_RS10120;product=hypothetical protein;protein_id=WP_223961466.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 61206 62444 . - . ID=gene-LDO45_RS10125;Name=LDO45_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10125;old_locus_tag=BDI4_190074 NZ_CAJZAS010000101.1 Protein Homology CDS 61206 62444 . - 0 ID=cds-WP_223961374.1;Parent=gene-LDO45_RS10125;Dbxref=GenBank:WP_223961374.1;Name=WP_223961374.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186205.1;locus_tag=LDO45_RS10125;product=S53 family peptidase;protein_id=WP_223961374.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 62479 64611 . - . ID=gene-LDO45_RS10130;Name=LDO45_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10130;old_locus_tag=BDI4_190075 NZ_CAJZAS010000101.1 Protein Homology CDS 62479 64611 . - 0 ID=cds-WP_223961376.1;Parent=gene-LDO45_RS10130;Dbxref=GenBank:WP_223961376.1;Name=WP_223961376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372418.1;locus_tag=LDO45_RS10130;product=polysaccharide deacetylase family protein;protein_id=WP_223961376.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 65298 67379 . - . ID=gene-LDO45_RS10135;Name=LDO45_RS10135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10135;old_locus_tag=BDI4_190076 NZ_CAJZAS010000101.1 Protein Homology CDS 65298 67379 . - 0 ID=cds-WP_223961378.1;Parent=gene-LDO45_RS10135;Dbxref=GenBank:WP_223961378.1;Name=WP_223961378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754434.1;locus_tag=LDO45_RS10135;product=hypothetical protein;protein_id=WP_223961378.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 67613 68731 . + . ID=gene-LDO45_RS10140;Name=LDO45_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10140;old_locus_tag=BDI4_190077 NZ_CAJZAS010000101.1 Protein Homology CDS 67613 68731 . + 0 ID=cds-WP_223961380.1;Parent=gene-LDO45_RS10140;Dbxref=GenBank:WP_223961380.1;Name=WP_223961380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758640.1;locus_tag=LDO45_RS10140;product=helix-turn-helix transcriptional regulator;protein_id=WP_223961380.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 68780 70969 . - . ID=gene-LDO45_RS10145;Name=LDO45_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10145;old_locus_tag=BDI4_190078 NZ_CAJZAS010000101.1 Protein Homology CDS 68780 70969 . - 0 ID=cds-WP_223961382.1;Parent=gene-LDO45_RS10145;Dbxref=GenBank:WP_223961382.1;Name=WP_223961382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661238.1;locus_tag=LDO45_RS10145;product=TonB-dependent siderophore receptor;protein_id=WP_223961382.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 71617 73809 . + . ID=gene-LDO45_RS10150;Name=LDO45_RS10150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10150;old_locus_tag=BDI4_190080 NZ_CAJZAS010000101.1 Protein Homology CDS 71617 73809 . + 0 ID=cds-WP_223961384.1;Parent=gene-LDO45_RS10150;Dbxref=GenBank:WP_223961384.1;Name=WP_223961384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372405.1;locus_tag=LDO45_RS10150;product=LamG-like jellyroll fold domain-containing protein;protein_id=WP_223961384.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 73886 75073 . - . ID=gene-LDO45_RS10155;Name=LDO45_RS10155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10155;old_locus_tag=BDI4_190081 NZ_CAJZAS010000101.1 Protein Homology CDS 73886 75073 . - 0 ID=cds-WP_223961386.1;Parent=gene-LDO45_RS10155;Dbxref=GenBank:WP_223961386.1;Name=WP_223961386.1;Ontology_term=GO:0016787,GO:0016810;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749710.1;locus_tag=LDO45_RS10155;product=M20 aminoacylase family protein;protein_id=WP_223961386.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 75124 76593 . - . ID=gene-LDO45_RS10160;Name=LDO45_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10160;old_locus_tag=BDI4_190082 NZ_CAJZAS010000101.1 Protein Homology CDS 75124 76593 . - 0 ID=cds-WP_223961388.1;Parent=gene-LDO45_RS10160;Dbxref=GenBank:WP_223961388.1;Name=WP_223961388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661234.1;locus_tag=LDO45_RS10160;product=aldehyde dehydrogenase family protein;protein_id=WP_223961388.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 76655 77980 . - . ID=gene-LDO45_RS10165;Name=LDO45_RS10165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10165;old_locus_tag=BDI4_190083 NZ_CAJZAS010000101.1 Protein Homology CDS 76655 77980 . - 0 ID=cds-WP_223961390.1;Parent=gene-LDO45_RS10165;Dbxref=GenBank:WP_223961390.1;Name=WP_223961390.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661232.1;locus_tag=LDO45_RS10165;product=FAD-binding oxidoreductase;protein_id=WP_223961390.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 77983 78717 . - . ID=gene-LDO45_RS10170;Name=LDO45_RS10170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10170;old_locus_tag=BDI4_190084 NZ_CAJZAS010000101.1 Protein Homology CDS 77983 78717 . - 0 ID=cds-WP_223961392.1;Parent=gene-LDO45_RS10170;Dbxref=GenBank:WP_223961392.1;Name=WP_223961392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758405.1;locus_tag=LDO45_RS10170;product=cupin domain-containing protein;protein_id=WP_223961392.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 78808 79263 . - . ID=gene-LDO45_RS10175;Name=LDO45_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10175;old_locus_tag=BDI4_190085 NZ_CAJZAS010000101.1 Protein Homology CDS 78808 79263 . - 0 ID=cds-WP_223961394.1;Parent=gene-LDO45_RS10175;Dbxref=GenBank:WP_223961394.1;Name=WP_223961394.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661230.1;locus_tag=LDO45_RS10175;product=helix-turn-helix domain-containing protein;protein_id=WP_223961394.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 79275 79421 . - . ID=gene-LDO45_RS10180;Name=LDO45_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10180 NZ_CAJZAS010000101.1 GeneMarkS-2+ CDS 79275 79421 . - 0 ID=cds-WP_223961396.1;Parent=gene-LDO45_RS10180;Dbxref=GenBank:WP_223961396.1;Name=WP_223961396.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS10180;product=hypothetical protein;protein_id=WP_223961396.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 79447 80724 . - . ID=gene-LDO45_RS10185;Name=LDO45_RS10185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10185;old_locus_tag=BDI4_190086 NZ_CAJZAS010000101.1 Protein Homology CDS 79447 80724 . - 0 ID=cds-WP_223961397.1;Parent=gene-LDO45_RS10185;Dbxref=GenBank:WP_223961397.1;Name=WP_223961397.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372397.1;locus_tag=LDO45_RS10185;product=FAD-binding oxidoreductase;protein_id=WP_223961397.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 80891 82762 . - . ID=gene-LDO45_RS10190;Name=LDO45_RS10190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10190;old_locus_tag=BDI4_190087 NZ_CAJZAS010000101.1 Protein Homology CDS 80891 82762 . - 0 ID=cds-WP_223961399.1;Parent=gene-LDO45_RS10190;Dbxref=GenBank:WP_223961399.1;Name=WP_223961399.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880470.1;locus_tag=LDO45_RS10190;product=ABC transporter ATP-binding protein;protein_id=WP_223961399.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 82762 83721 . - . ID=gene-LDO45_RS10195;Name=LDO45_RS10195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10195;old_locus_tag=BDI4_190088 NZ_CAJZAS010000101.1 Protein Homology CDS 82762 83721 . - 0 ID=cds-WP_223961400.1;Parent=gene-LDO45_RS10195;Dbxref=GenBank:WP_223961400.1;Name=WP_223961400.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424675.1;locus_tag=LDO45_RS10195;product=ABC transporter permease;protein_id=WP_223961400.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 83752 84705 . - . ID=gene-LDO45_RS10200;Name=LDO45_RS10200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10200;old_locus_tag=BDI4_190089 NZ_CAJZAS010000101.1 Protein Homology CDS 83752 84705 . - 0 ID=cds-WP_059536198.1;Parent=gene-LDO45_RS10200;Dbxref=GenBank:WP_059536198.1;Name=WP_059536198.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335753.1;locus_tag=LDO45_RS10200;product=ABC transporter permease;protein_id=WP_059536198.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 84785 86368 . - . ID=gene-LDO45_RS10205;Name=LDO45_RS10205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10205;old_locus_tag=BDI4_190090 NZ_CAJZAS010000101.1 Protein Homology CDS 84785 86368 . - 0 ID=cds-WP_059593563.1;Parent=gene-LDO45_RS10205;Dbxref=GenBank:WP_059593563.1;Name=WP_059593563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661225.1;locus_tag=LDO45_RS10205;product=ABC transporter substrate-binding protein;protein_id=WP_059593563.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 86476 86694 . - . ID=gene-LDO45_RS10210;Name=LDO45_RS10210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10210;old_locus_tag=BDI4_190091 NZ_CAJZAS010000101.1 Protein Homology CDS 86476 86694 . - 0 ID=cds-WP_059690511.1;Parent=gene-LDO45_RS10210;Dbxref=GenBank:WP_059690511.1;Name=WP_059690511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482804.1;locus_tag=LDO45_RS10210;product=hypothetical protein;protein_id=WP_059690511.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 87053 88591 . - . ID=gene-LDO45_RS10215;Name=LDO45_RS10215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10215;old_locus_tag=BDI4_190092 NZ_CAJZAS010000101.1 Protein Homology CDS 87053 88591 . - 0 ID=cds-WP_223961401.1;Parent=gene-LDO45_RS10215;Dbxref=GenBank:WP_223961401.1;Name=WP_223961401.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762108.1;locus_tag=LDO45_RS10215;product=methyl-accepting chemotaxis protein;protein_id=WP_223961401.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 88759 89427 . - . ID=gene-LDO45_RS10220;Name=LDO45_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10220;old_locus_tag=BDI4_190093 NZ_CAJZAS010000101.1 Protein Homology CDS 88759 89427 . - 0 ID=cds-WP_059536187.1;Parent=gene-LDO45_RS10220;Dbxref=GenBank:WP_059536187.1;Name=WP_059536187.1;Ontology_term=GO:0019120;gbkey=CDS;go_function=hydrolase activity%2C acting on acid halide bonds%2C in C-halide compounds|0019120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549842.1;locus_tag=LDO45_RS10220;product=haloacid dehalogenase type II;protein_id=WP_059536187.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 89542 90069 . + . ID=gene-LDO45_RS10225;Name=LDO45_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10225;old_locus_tag=BDI4_190094 NZ_CAJZAS010000101.1 Protein Homology CDS 89542 90069 . + 0 ID=cds-WP_223961402.1;Parent=gene-LDO45_RS10225;Dbxref=GenBank:WP_223961402.1;Name=WP_223961402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413676.1;locus_tag=LDO45_RS10225;product=IS21 family transposase;protein_id=WP_223961402.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 90126 90476 . + . ID=gene-LDO45_RS10230;Name=LDO45_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10230;old_locus_tag=BDI4_190095 NZ_CAJZAS010000101.1 Protein Homology CDS 90126 90476 . + 0 ID=cds-WP_223961403.1;Parent=gene-LDO45_RS10230;Dbxref=GenBank:WP_223961403.1;Name=WP_223961403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089496.1;locus_tag=LDO45_RS10230;product=hypothetical protein;protein_id=WP_223961403.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 90613 90948 . + . ID=gene-LDO45_RS10235;Name=LDO45_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10235;old_locus_tag=BDI4_190097 NZ_CAJZAS010000101.1 Protein Homology CDS 90613 90948 . + 0 ID=cds-WP_060028118.1;Parent=gene-LDO45_RS10235;Dbxref=GenBank:WP_060028118.1;Name=WP_060028118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413660.1;locus_tag=LDO45_RS10235;product=hypothetical protein;protein_id=WP_060028118.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 91032 91586 . + . ID=gene-LDO45_RS10240;Name=LDO45_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10240;old_locus_tag=BDI4_190098 NZ_CAJZAS010000101.1 Protein Homology CDS 91032 91586 . + 0 ID=cds-WP_223961404.1;Parent=gene-LDO45_RS10240;Dbxref=GenBank:WP_223961404.1;Name=WP_223961404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875781.1;locus_tag=LDO45_RS10240;product=PAAR domain-containing protein;protein_id=WP_223961404.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 91590 92210 . + . ID=gene-LDO45_RS10245;Name=LDO45_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10245;old_locus_tag=BDI4_190099 NZ_CAJZAS010000101.1 Protein Homology CDS 91590 92210 . + 0 ID=cds-WP_223961405.1;Parent=gene-LDO45_RS10245;Dbxref=GenBank:WP_223961405.1;Name=WP_223961405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089498.1;locus_tag=LDO45_RS10245;product=type VI secretion system amidase effector protein Tae4;protein_id=WP_223961405.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 92210 92548 . + . ID=gene-LDO45_RS10250;Name=LDO45_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10250 NZ_CAJZAS010000101.1 Protein Homology CDS 92210 92548 . + 0 ID=cds-WP_223961407.1;Parent=gene-LDO45_RS10250;Dbxref=GenBank:WP_223961407.1;Name=WP_223961407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875779.1;locus_tag=LDO45_RS10250;product=hypothetical protein;protein_id=WP_223961407.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 92632 92982 . - . ID=gene-LDO45_RS10255;Name=LDO45_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10255 NZ_CAJZAS010000101.1 GeneMarkS-2+ CDS 92632 92982 . - 0 ID=cds-WP_223961409.1;Parent=gene-LDO45_RS10255;Dbxref=GenBank:WP_223961409.1;Name=WP_223961409.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS10255;product=hypothetical protein;protein_id=WP_223961409.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 93091 94161 . - . ID=gene-LDO45_RS10260;Name=LDO45_RS10260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10260;old_locus_tag=BDI4_190100 NZ_CAJZAS010000101.1 Protein Homology CDS 93091 94161 . - 0 ID=cds-WP_223961411.1;Parent=gene-LDO45_RS10260;Dbxref=GenBank:WP_223961411.1;Name=WP_223961411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100783.1;locus_tag=LDO45_RS10260;product=phage late control D family protein;protein_id=WP_223961411.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq pseudogene 94482 94868 . - . ID=gene-LDO45_RS34400;Name=LDO45_RS34400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34400;partial=true;pseudo=true;start_range=.,94482 NZ_CAJZAS010000101.1 Protein Homology CDS 94482 94868 . - 0 ID=cds-LDO45_RS34400;Parent=gene-LDO45_RS34400;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009976644.1;locus_tag=LDO45_RS34400;partial=true;product=phage tail protein;pseudo=true;start_range=.,94482;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 94885 98106 . - . ID=gene-LDO45_RS10270;Name=LDO45_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10270;old_locus_tag=BDI4_190102 NZ_CAJZAS010000101.1 Protein Homology CDS 94885 98106 . - 0 ID=cds-WP_374109527.1;Parent=gene-LDO45_RS10270;Dbxref=GenBank:WP_374109527.1;Name=WP_374109527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016038195.1;locus_tag=LDO45_RS10270;product=hypothetical protein;protein_id=WP_374109527.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 98109 98225 . - . ID=gene-LDO45_RS10280;Name=LDO45_RS10280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10280;old_locus_tag=BDI4_190103 NZ_CAJZAS010000101.1 Protein Homology CDS 98109 98225 . - 0 ID=cds-WP_223961415.1;Parent=gene-LDO45_RS10280;Dbxref=GenBank:WP_223961415.1;Name=WP_223961415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004555837.1;locus_tag=LDO45_RS10280;product=GpE family phage tail protein;protein_id=WP_223961415.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 98234 98587 . - . ID=gene-LDO45_RS10285;Name=LDO45_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10285;old_locus_tag=BDI4_190104 NZ_CAJZAS010000101.1 Protein Homology CDS 98234 98587 . - 0 ID=cds-WP_223961416.1;Parent=gene-LDO45_RS10285;Dbxref=GenBank:WP_223961416.1;Name=WP_223961416.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413682.1;locus_tag=LDO45_RS10285;product=phage tail assembly protein;protein_id=WP_223961416.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 98651 99160 . - . ID=gene-LDO45_RS10290;Name=LDO45_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10290;old_locus_tag=BDI4_190105 NZ_CAJZAS010000101.1 Protein Homology CDS 98651 99160 . - 0 ID=cds-WP_223961417.1;Parent=gene-LDO45_RS10290;Dbxref=GenBank:WP_223961417.1;Name=WP_223961417.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011205533.1;locus_tag=LDO45_RS10290;product=phage major tail tube protein;protein_id=WP_223961417.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 99198 100373 . - . ID=gene-LDO45_RS10295;Name=LDO45_RS10295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10295;old_locus_tag=BDI4_190106 NZ_CAJZAS010000101.1 Protein Homology CDS 99198 100373 . - 0 ID=cds-WP_223961418.1;Parent=gene-LDO45_RS10295;Dbxref=GenBank:WP_223961418.1;Name=WP_223961418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089506.1;locus_tag=LDO45_RS10295;product=phage tail sheath protein;protein_id=WP_223961418.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 100411 100851 . - . ID=gene-LDO45_RS10300;Name=LDO45_RS10300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10300;old_locus_tag=BDI4_190107 NZ_CAJZAS010000101.1 Protein Homology CDS 100411 100851 . - 0 ID=cds-WP_223961419.1;Parent=gene-LDO45_RS10300;Dbxref=GenBank:WP_223961419.1;Name=WP_223961419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089507.1;locus_tag=LDO45_RS10300;product=tail fiber assembly protein;protein_id=WP_223961419.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 100853 101950 . - . ID=gene-LDO45_RS10305;Name=LDO45_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10305;old_locus_tag=BDI4_190108 NZ_CAJZAS010000101.1 GeneMarkS-2+ CDS 100853 101950 . - 0 ID=cds-WP_223961420.1;Parent=gene-LDO45_RS10305;Dbxref=GenBank:WP_223961420.1;Name=WP_223961420.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS10305;product=hypothetical protein;protein_id=WP_223961420.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 101950 102513 . - . ID=gene-LDO45_RS10310;Name=LDO45_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10310;old_locus_tag=BDI4_190109 NZ_CAJZAS010000101.1 Protein Homology CDS 101950 102513 . - 0 ID=cds-WP_223961421.1;Parent=gene-LDO45_RS10310;Dbxref=GenBank:WP_223961421.1;Name=WP_223961421.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413672.1;locus_tag=LDO45_RS10310;product=phage tail protein I;protein_id=WP_223961421.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 102506 103417 . - . ID=gene-LDO45_RS10315;Name=LDO45_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10315;old_locus_tag=BDI4_190110 NZ_CAJZAS010000101.1 Protein Homology CDS 102506 103417 . - 0 ID=cds-WP_223961423.1;Parent=gene-LDO45_RS10315;Dbxref=GenBank:WP_223961423.1;Name=WP_223961423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089510.1;locus_tag=LDO45_RS10315;product=baseplate J/gp47 family protein;protein_id=WP_223961423.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 103414 103782 . - . ID=gene-LDO45_RS10320;Name=LDO45_RS10320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10320;old_locus_tag=BDI4_190111 NZ_CAJZAS010000101.1 Protein Homology CDS 103414 103782 . - 0 ID=cds-WP_223961424.1;Parent=gene-LDO45_RS10320;Dbxref=GenBank:WP_223961424.1;Name=WP_223961424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496265.1;locus_tag=LDO45_RS10320;product=GPW/gp25 family protein;protein_id=WP_223961424.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 103779 104462 . - . ID=gene-LDO45_RS10325;Name=LDO45_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10325;old_locus_tag=BDI4_190112 NZ_CAJZAS010000101.1 Protein Homology CDS 103779 104462 . - 0 ID=cds-WP_223961425.1;Parent=gene-LDO45_RS10325;Dbxref=GenBank:WP_223961425.1;Name=WP_223961425.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334859.1;locus_tag=LDO45_RS10325;product=phage baseplate assembly protein V;protein_id=WP_223961425.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 104550 104972 . - . ID=gene-LDO45_RS10330;Name=LDO45_RS10330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10330;old_locus_tag=BDI4_190113 NZ_CAJZAS010000101.1 Protein Homology CDS 104550 104972 . - 0 ID=cds-WP_253074737.1;Parent=gene-LDO45_RS10330;Dbxref=GenBank:WP_253074737.1;Name=WP_253074737.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004531055.1;locus_tag=LDO45_RS10330;product=phage virion morphogenesis protein;protein_id=WP_253074737.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 105005 105472 . - . ID=gene-LDO45_RS10335;Name=LDO45_RS10335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10335;old_locus_tag=BDI4_190114 NZ_CAJZAS010000101.1 Protein Homology CDS 105005 105472 . - 0 ID=cds-WP_308051205.1;Parent=gene-LDO45_RS10335;Dbxref=GenBank:WP_308051205.1;Name=WP_308051205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089514.1;locus_tag=LDO45_RS10335;product=phage tail protein;protein_id=WP_308051205.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 105441 105686 . - . ID=gene-LDO45_RS10340;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=LDO45_RS10340;old_locus_tag=BDI4_190115 NZ_CAJZAS010000101.1 Protein Homology CDS 105441 105686 . - 0 ID=cds-WP_253074736.1;Parent=gene-LDO45_RS10340;Dbxref=GenBank:WP_253074736.1;Name=WP_253074736.1;Note=LysC is an Rz1-like component of a phage lytic system%2C substantially overlapping although not fully embedded in the gene for the Rz-like LysB component.;gbkey=CDS;gene=lysC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334865.1;locus_tag=LDO45_RS10340;product=Rz1-like lysis system protein LysC;protein_id=WP_253074736.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 105580 106014 . - . ID=gene-LDO45_RS10345;Name=lysB;gbkey=Gene;gene=lysB;gene_biotype=protein_coding;locus_tag=LDO45_RS10345;old_locus_tag=BDI4_190116 NZ_CAJZAS010000101.1 Protein Homology CDS 105580 106014 . - 0 ID=cds-WP_223961428.1;Parent=gene-LDO45_RS10345;Dbxref=GenBank:WP_223961428.1;Name=WP_223961428.1;Note=The gene for this Rz-like phage lysis system protein may overlap extensively with the gene for the other spanin subunit%2C the Rz1-like protein in the outer membrane.;gbkey=CDS;gene=lysB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413662.1;locus_tag=LDO45_RS10345;product=Rz-like lysis system protein LysB;protein_id=WP_223961428.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 106011 106817 . - . ID=gene-LDO45_RS10350;Name=LDO45_RS10350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10350;old_locus_tag=BDI4_190117 NZ_CAJZAS010000101.1 Protein Homology CDS 106011 106817 . - 0 ID=cds-WP_223961429.1;Parent=gene-LDO45_RS10350;Dbxref=GenBank:WP_223961429.1;Name=WP_223961429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909360.1;locus_tag=LDO45_RS10350;product=N-acetylmuramidase family protein;protein_id=WP_223961429.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 106814 107086 . - . ID=gene-LDO45_RS10355;Name=LDO45_RS10355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10355;old_locus_tag=BDI4_190118 NZ_CAJZAS010000101.1 Protein Homology CDS 106814 107086 . - 0 ID=cds-WP_074802675.1;Parent=gene-LDO45_RS10355;Dbxref=GenBank:WP_074802675.1;Name=WP_074802675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524440.1;locus_tag=LDO45_RS10355;product=phage holin family protein;protein_id=WP_074802675.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 107092 107436 . - . ID=gene-LDO45_RS10360;Name=LDO45_RS10360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10360;old_locus_tag=BDI4_190119 NZ_CAJZAS010000101.1 Protein Homology CDS 107092 107436 . - 0 ID=cds-WP_060028097.1;Parent=gene-LDO45_RS10360;Dbxref=GenBank:WP_060028097.1;Name=WP_060028097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009969796.1;locus_tag=LDO45_RS10360;product=putative holin;protein_id=WP_060028097.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 107455 107661 . - . ID=gene-LDO45_RS10365;Name=LDO45_RS10365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10365;old_locus_tag=BDI4_190120 NZ_CAJZAS010000101.1 Protein Homology CDS 107455 107661 . - 0 ID=cds-WP_223961431.1;Parent=gene-LDO45_RS10365;Dbxref=GenBank:WP_223961431.1;Name=WP_223961431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334870.1;locus_tag=LDO45_RS10365;product=tail protein X;protein_id=WP_223961431.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 107658 108011 . - . ID=gene-LDO45_RS10370;Name=LDO45_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10370;old_locus_tag=BDI4_190121 NZ_CAJZAS010000101.1 GeneMarkS-2+ CDS 107658 108011 . - 0 ID=cds-WP_223961433.1;Parent=gene-LDO45_RS10370;Dbxref=GenBank:WP_223961433.1;Name=WP_223961433.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS10370;product=hypothetical protein;protein_id=WP_223961433.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 108011 108490 . - . ID=gene-LDO45_RS10375;Name=LDO45_RS10375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10375;old_locus_tag=BDI4_190122 NZ_CAJZAS010000101.1 Protein Homology CDS 108011 108490 . - 0 ID=cds-WP_223961435.1;Parent=gene-LDO45_RS10375;Dbxref=GenBank:WP_223961435.1;Name=WP_223961435.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017713.5;locus_tag=LDO45_RS10375;product=head completion/stabilization protein;protein_id=WP_223961435.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 108593 109318 . - . ID=gene-LDO45_RS10380;Name=gpM;gbkey=Gene;gene=gpM;gene_biotype=protein_coding;locus_tag=LDO45_RS10380;old_locus_tag=BDI4_190123 NZ_CAJZAS010000101.1 Protein Homology CDS 108593 109318 . - 0 ID=cds-WP_223961470.1;Parent=gene-LDO45_RS10380;Dbxref=GenBank:WP_223961470.1;Name=WP_223961470.1;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;gene=gpM;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015985025.1;locus_tag=LDO45_RS10380;product=phage terminase small subunit;protein_id=WP_223961470.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 109315 110334 . - . ID=gene-LDO45_RS10385;Name=LDO45_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10385;old_locus_tag=BDI4_190124 NZ_CAJZAS010000101.1 Protein Homology CDS 109315 110334 . - 0 ID=cds-WP_223961437.1;Parent=gene-LDO45_RS10385;Dbxref=GenBank:WP_223961437.1;Name=WP_223961437.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413709.1;locus_tag=LDO45_RS10385;product=phage major capsid protein%2C P2 family;protein_id=WP_223961437.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 110391 111440 . - . ID=gene-LDO45_RS10390;Name=LDO45_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10390;old_locus_tag=BDI4_190125 NZ_CAJZAS010000101.1 Protein Homology CDS 110391 111440 . - 0 ID=cds-WP_223961472.1;Parent=gene-LDO45_RS10390;Dbxref=GenBank:WP_223961472.1;Name=WP_223961472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413711.1;locus_tag=LDO45_RS10390;product=GPO family capsid scaffolding protein;protein_id=WP_223961472.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 111592 113364 . + . ID=gene-LDO45_RS10395;Name=LDO45_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10395;old_locus_tag=BDI4_190126 NZ_CAJZAS010000101.1 Protein Homology CDS 111592 113364 . + 0 ID=cds-WP_223961439.1;Parent=gene-LDO45_RS10395;Dbxref=GenBank:WP_223961439.1;Name=WP_223961439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027260.1;locus_tag=LDO45_RS10395;product=terminase ATPase subunit family protein;protein_id=WP_223961439.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 113361 114422 . + . ID=gene-LDO45_RS10400;Name=LDO45_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10400;old_locus_tag=BDI4_190127 NZ_CAJZAS010000101.1 Protein Homology CDS 113361 114422 . + 0 ID=cds-WP_223961441.1;Parent=gene-LDO45_RS10400;Dbxref=GenBank:WP_223961441.1;Name=WP_223961441.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013589988.1;locus_tag=LDO45_RS10400;product=phage portal protein;protein_id=WP_223961441.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 114404 114712 . - . ID=gene-LDO45_RS10405;Name=LDO45_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10405;old_locus_tag=BDI4_190128 NZ_CAJZAS010000101.1 Protein Homology CDS 114404 114712 . - 0 ID=cds-WP_223961443.1;Parent=gene-LDO45_RS10405;Dbxref=GenBank:WP_223961443.1;Name=WP_223961443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015039429.1;locus_tag=LDO45_RS10405;product=hypothetical protein;protein_id=WP_223961443.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 114737 115096 . - . ID=gene-LDO45_RS10410;Name=LDO45_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10410;old_locus_tag=BDI4_190129 NZ_CAJZAS010000101.1 Protein Homology CDS 114737 115096 . - 0 ID=cds-WP_223961445.1;Parent=gene-LDO45_RS10410;Dbxref=GenBank:WP_223961445.1;Name=WP_223961445.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413688.1;locus_tag=LDO45_RS10410;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_223961445.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 115093 115347 . - . ID=gene-LDO45_RS10415;Name=LDO45_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10415;old_locus_tag=BDI4_190130 NZ_CAJZAS010000101.1 Protein Homology CDS 115093 115347 . - 0 ID=cds-WP_223961447.1;Parent=gene-LDO45_RS10415;Dbxref=GenBank:WP_223961447.1;Name=WP_223961447.1;Ontology_term=GO:0003729;gbkey=CDS;go_function=mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875749.1;locus_tag=LDO45_RS10415;product=type II toxin-antitoxin system HicA family toxin;protein_id=WP_223961447.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 115767 115955 . - . ID=gene-LDO45_RS10420;Name=LDO45_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10420;old_locus_tag=BDI4_190132 NZ_CAJZAS010000101.1 Protein Homology CDS 115767 115955 . - 0 ID=cds-WP_223961448.1;Parent=gene-LDO45_RS10420;Dbxref=GenBank:WP_223961448.1;Name=WP_223961448.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF013561.5;locus_tag=LDO45_RS10420;product=ribbon-helix-helix protein%2C CopG family;protein_id=WP_223961448.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 116119 116772 . - . ID=gene-LDO45_RS10425;Name=LDO45_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10425;old_locus_tag=BDI4_190133 NZ_CAJZAS010000101.1 Protein Homology CDS 116119 116772 . - 0 ID=cds-WP_223961449.1;Parent=gene-LDO45_RS10425;Dbxref=GenBank:WP_223961449.1;Name=WP_223961449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601099.1;locus_tag=LDO45_RS10425;product=AAA family ATPase;protein_id=WP_223961449.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 116861 117067 . - . ID=gene-LDO45_RS10430;Name=LDO45_RS10430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10430;old_locus_tag=BDI4_190134 NZ_CAJZAS010000101.1 Protein Homology CDS 116861 117067 . - 0 ID=cds-WP_059561353.1;Parent=gene-LDO45_RS10430;Dbxref=GenBank:WP_059561353.1;Name=WP_059561353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532731.1;locus_tag=LDO45_RS10430;product=ogr/Delta-like zinc finger family protein;protein_id=WP_059561353.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 117064 117330 . - . ID=gene-LDO45_RS10435;Name=LDO45_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10435;old_locus_tag=BDI4_190135 NZ_CAJZAS010000101.1 Protein Homology CDS 117064 117330 . - 0 ID=cds-WP_223961450.1;Parent=gene-LDO45_RS10435;Dbxref=GenBank:WP_223961450.1;Name=WP_223961450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009971787.1;locus_tag=LDO45_RS10435;product=ogr/Delta-like zinc finger family protein;protein_id=WP_223961450.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 117344 119362 . - . ID=gene-LDO45_RS10440;Name=LDO45_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10440;old_locus_tag=BDI4_190136 NZ_CAJZAS010000101.1 Protein Homology CDS 117344 119362 . - 0 ID=cds-WP_223961451.1;Parent=gene-LDO45_RS10440;Dbxref=GenBank:WP_223961451.1;Name=WP_223961451.1;Ontology_term=GO:0006260,GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013592342.1;locus_tag=LDO45_RS10440;product=replication endonuclease;protein_id=WP_223961451.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 119359 119526 . - . ID=gene-LDO45_RS10445;Name=LDO45_RS10445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10445;old_locus_tag=BDI4_190137 NZ_CAJZAS010000101.1 GeneMarkS-2+ CDS 119359 119526 . - 0 ID=cds-WP_223961452.1;Parent=gene-LDO45_RS10445;Dbxref=GenBank:WP_223961452.1;Name=WP_223961452.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS10445;product=hypothetical protein;protein_id=WP_223961452.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 119562 119837 . - . ID=gene-LDO45_RS10450;Name=LDO45_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10450;old_locus_tag=BDI4_190138 NZ_CAJZAS010000101.1 GeneMarkS-2+ CDS 119562 119837 . - 0 ID=cds-WP_223961453.1;Parent=gene-LDO45_RS10450;Dbxref=GenBank:WP_223961453.1;Name=WP_223961453.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS10450;product=hypothetical protein;protein_id=WP_223961453.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 119834 120028 . - . ID=gene-LDO45_RS10455;Name=LDO45_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10455;old_locus_tag=BDI4_190139 NZ_CAJZAS010000101.1 GeneMarkS-2+ CDS 119834 120028 . - 0 ID=cds-WP_223961454.1;Parent=gene-LDO45_RS10455;Dbxref=GenBank:WP_223961454.1;Name=WP_223961454.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS10455;product=hypothetical protein;protein_id=WP_223961454.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 120031 120168 . - . ID=gene-LDO45_RS10460;Name=LDO45_RS10460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10460;old_locus_tag=BDI4_190140 NZ_CAJZAS010000101.1 GeneMarkS-2+ CDS 120031 120168 . - 0 ID=cds-WP_223961456.1;Parent=gene-LDO45_RS10460;Dbxref=GenBank:WP_223961456.1;Name=WP_223961456.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS10460;product=hypothetical protein;protein_id=WP_223961456.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 120353 120598 . - . ID=gene-LDO45_RS10465;Name=LDO45_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10465;old_locus_tag=BDI4_190141 NZ_CAJZAS010000101.1 GeneMarkS-2+ CDS 120353 120598 . - 0 ID=cds-WP_223961457.1;Parent=gene-LDO45_RS10465;Dbxref=GenBank:WP_223961457.1;Name=WP_223961457.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS10465;product=hypothetical protein;protein_id=WP_223961457.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 120597 120902 . + . ID=gene-LDO45_RS10470;Name=LDO45_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10470;old_locus_tag=BDI4_190142 NZ_CAJZAS010000101.1 GeneMarkS-2+ CDS 120597 120902 . + 0 ID=cds-WP_223961458.1;Parent=gene-LDO45_RS10470;Dbxref=GenBank:WP_223961458.1;Name=WP_223961458.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS10470;product=hypothetical protein;protein_id=WP_223961458.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 120938 121618 . - . ID=gene-LDO45_RS10475;Name=LDO45_RS10475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10475 NZ_CAJZAS010000101.1 Protein Homology CDS 120938 121618 . - 0 ID=cds-WP_223961459.1;Parent=gene-LDO45_RS10475;Dbxref=GenBank:WP_223961459.1;Name=WP_223961459.1;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:NF017640.5;locus_tag=LDO45_RS10475;product=replication endonuclease;protein_id=WP_223961459.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 121615 121776 . - . ID=gene-LDO45_RS10480;Name=LDO45_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10480 NZ_CAJZAS010000101.1 GeneMarkS-2+ CDS 121615 121776 . - 0 ID=cds-WP_155628959.1;Parent=gene-LDO45_RS10480;Dbxref=GenBank:WP_155628959.1;Name=WP_155628959.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS10480;product=hypothetical protein;protein_id=WP_155628959.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 122018 122356 . + . ID=gene-LDO45_RS10485;Name=LDO45_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10485;old_locus_tag=BDI4_190145 NZ_CAJZAS010000101.1 Protein Homology CDS 122018 122356 . + 0 ID=cds-WP_223961460.1;Parent=gene-LDO45_RS10485;Dbxref=GenBank:WP_223961460.1;Name=WP_223961460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009976611.1;locus_tag=LDO45_RS10485;product=DUF3693 domain-containing protein;protein_id=WP_223961460.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 122814 123674 . + . ID=gene-LDO45_RS10490;Name=LDO45_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10490;old_locus_tag=BDI4_190147 NZ_CAJZAS010000101.1 Protein Homology CDS 122814 123674 . + 0 ID=cds-WP_059820088.1;Parent=gene-LDO45_RS10490;Dbxref=GenBank:WP_059820088.1;Name=WP_059820088.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482807.1;locus_tag=LDO45_RS10490;product=GNAT family N-acetyltransferase;protein_id=WP_059820088.1;transl_table=11 NZ_CAJZAS010000101.1 RefSeq gene 123687 124196 . + . ID=gene-LDO45_RS10495;Name=LDO45_RS10495;end_range=124196,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10495;partial=true NZ_CAJZAS010000101.1 Protein Homology CDS 123687 124196 . + 0 ID=cds-WP_290371011.1;Parent=gene-LDO45_RS10495;Dbxref=GenBank:WP_290371011.1;Name=WP_290371011.1;Ontology_term=GO:0051287;end_range=124196,.;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880483.1;locus_tag=LDO45_RS10495;partial=true;product=NAD(P)-dependent oxidoreductase;protein_id=WP_290371011.1;transl_table=11 ##sequence-region NZ_CAJZAS010000102.1 1 11367 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000102.1 RefSeq region 1 11367 . + . ID=NZ_CAJZAS010000102.1:1..11367;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_190 NZ_CAJZAS010000102.1 RefSeq gene 1 1041 . - . ID=gene-LDO45_RS10500;Name=LDO45_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10500;partial=true;start_range=.,1 NZ_CAJZAS010000102.1 Protein Homology CDS 1 1041 . - 0 ID=cds-WP_223961478.1;Parent=gene-LDO45_RS10500;Dbxref=GenBank:WP_223961478.1;Name=WP_223961478.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327987.1;locus_tag=LDO45_RS10500;partial=true;product=FAD-dependent oxidoreductase;protein_id=WP_223961478.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000102.1 RefSeq gene 1421 2224 . + . ID=gene-LDO45_RS10505;Name=LDO45_RS10505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10505;old_locus_tag=BDI4_1900002 NZ_CAJZAS010000102.1 Protein Homology CDS 1421 2224 . + 0 ID=cds-WP_223961480.1;Parent=gene-LDO45_RS10505;Dbxref=GenBank:WP_223961480.1;Name=WP_223961480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760627.1;locus_tag=LDO45_RS10505;product=EAL domain-containing protein;protein_id=WP_223961480.1;transl_table=11 NZ_CAJZAS010000102.1 RefSeq gene 2401 2811 . - . ID=gene-LDO45_RS10510;Name=LDO45_RS10510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10510;old_locus_tag=BDI4_1900004 NZ_CAJZAS010000102.1 Protein Homology CDS 2401 2811 . - 0 ID=cds-WP_059690834.1;Parent=gene-LDO45_RS10510;Dbxref=GenBank:WP_059690834.1;Name=WP_059690834.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656083.1;locus_tag=LDO45_RS10510;product=GFA family protein;protein_id=WP_059690834.1;transl_table=11 NZ_CAJZAS010000102.1 RefSeq gene 2939 3730 . - . ID=gene-LDO45_RS10515;Name=LDO45_RS10515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10515;old_locus_tag=BDI4_1900005 NZ_CAJZAS010000102.1 Protein Homology CDS 2939 3730 . - 0 ID=cds-WP_044844103.1;Parent=gene-LDO45_RS10515;Dbxref=GenBank:WP_044844103.1;Name=WP_044844103.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760626.1;locus_tag=LDO45_RS10515;product=IclR family transcriptional regulator;protein_id=WP_044844103.1;transl_table=11 NZ_CAJZAS010000102.1 RefSeq gene 3903 5090 . + . ID=gene-LDO45_RS10520;Name=LDO45_RS10520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10520;old_locus_tag=BDI4_1900006 NZ_CAJZAS010000102.1 Protein Homology CDS 3903 5090 . + 0 ID=cds-WP_059690701.1;Parent=gene-LDO45_RS10520;Dbxref=GenBank:WP_059690701.1;Name=WP_059690701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527638.1;locus_tag=LDO45_RS10520;product=acyl-CoA dehydrogenase;protein_id=WP_059690701.1;transl_table=11 NZ_CAJZAS010000102.1 RefSeq gene 5231 5869 . - . ID=gene-LDO45_RS10525;Name=LDO45_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10525;old_locus_tag=BDI4_1900007 NZ_CAJZAS010000102.1 Protein Homology CDS 5231 5869 . - 0 ID=cds-WP_034182833.1;Parent=gene-LDO45_RS10525;Dbxref=GenBank:WP_034182833.1;Name=WP_034182833.1;Ontology_term=GO:0098869,GO:0008379,GO:0051920;gbkey=CDS;go_function=thioredoxin peroxidase activity|0008379||IEA,peroxiredoxin activity|0051920||IEA;go_process=cellular oxidant detoxification|0098869||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003255836.1;locus_tag=LDO45_RS10525;product=peroxiredoxin;protein_id=WP_034182833.1;transl_table=11 NZ_CAJZAS010000102.1 RefSeq gene 6188 6490 . + . ID=gene-LDO45_RS10530;Name=LDO45_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10530;old_locus_tag=BDI4_1900008 NZ_CAJZAS010000102.1 Protein Homology CDS 6188 6490 . + 0 ID=cds-WP_006754606.1;Parent=gene-LDO45_RS10530;Dbxref=GenBank:WP_006754606.1;Name=WP_006754606.1;Ontology_term=GO:0043022,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883416.1;locus_tag=LDO45_RS10530;product=YqjD family protein;protein_id=WP_006754606.1;transl_table=11 NZ_CAJZAS010000102.1 RefSeq gene 6615 7004 . + . ID=gene-LDO45_RS10535;Name=LDO45_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10535;old_locus_tag=BDI4_1900009 NZ_CAJZAS010000102.1 Protein Homology CDS 6615 7004 . + 0 ID=cds-WP_223961482.1;Parent=gene-LDO45_RS10535;Dbxref=GenBank:WP_223961482.1;Name=WP_223961482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185460.1;locus_tag=LDO45_RS10535;product=phage holin family protein;protein_id=WP_223961482.1;transl_table=11 NZ_CAJZAS010000102.1 RefSeq gene 7048 7491 . + . ID=gene-LDO45_RS10540;Name=LDO45_RS10540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10540;old_locus_tag=BDI4_1900010 NZ_CAJZAS010000102.1 Protein Homology CDS 7048 7491 . + 0 ID=cds-WP_059530521.1;Parent=gene-LDO45_RS10540;Dbxref=GenBank:WP_059530521.1;Name=WP_059530521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484985.1;locus_tag=LDO45_RS10540;product=DUF3318 domain-containing protein;protein_id=WP_059530521.1;transl_table=11 NZ_CAJZAS010000102.1 RefSeq gene 7556 8008 . - . ID=gene-LDO45_RS10545;Name=LDO45_RS10545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10545;old_locus_tag=BDI4_1900011 NZ_CAJZAS010000102.1 Protein Homology CDS 7556 8008 . - 0 ID=cds-WP_223961484.1;Parent=gene-LDO45_RS10545;Dbxref=GenBank:WP_223961484.1;Name=WP_223961484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760620.1;locus_tag=LDO45_RS10545;product=type IV pilin protein;protein_id=WP_223961484.1;transl_table=11 NZ_CAJZAS010000102.1 RefSeq gene 8005 8553 . - . ID=gene-LDO45_RS10550;Name=LDO45_RS10550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10550;old_locus_tag=BDI4_1900012 NZ_CAJZAS010000102.1 Protein Homology CDS 8005 8553 . - 0 ID=cds-WP_223961486.1;Parent=gene-LDO45_RS10550;Dbxref=GenBank:WP_223961486.1;Name=WP_223961486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754602.1;locus_tag=LDO45_RS10550;product=pilus assembly protein;protein_id=WP_223961486.1;transl_table=11 NZ_CAJZAS010000102.1 RefSeq gene 8633 9472 . - . ID=gene-LDO45_RS10555;Name=LDO45_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10555;old_locus_tag=BDI4_1900013 NZ_CAJZAS010000102.1 Protein Homology CDS 8633 9472 . - 0 ID=cds-WP_223961488.1;Parent=gene-LDO45_RS10555;Dbxref=GenBank:WP_223961488.1;Name=WP_223961488.1;Ontology_term=GO:0043683;gbkey=CDS;go_process=type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363178.1;locus_tag=LDO45_RS10555;product=PilW family protein;protein_id=WP_223961488.1;transl_table=11 NZ_CAJZAS010000102.1 RefSeq gene 9456 9878 . - . ID=gene-LDO45_RS10560;Name=LDO45_RS10560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10560;old_locus_tag=BDI4_1900014 NZ_CAJZAS010000102.1 Protein Homology CDS 9456 9878 . - 0 ID=cds-WP_059530577.1;Parent=gene-LDO45_RS10560;Dbxref=GenBank:WP_059530577.1;Name=WP_059530577.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417101.1;locus_tag=LDO45_RS10560;product=type II secretion system protein J;protein_id=WP_059530577.1;transl_table=11 NZ_CAJZAS010000102.1 RefSeq gene 9875 10435 . - . ID=gene-LDO45_RS10565;Name=LDO45_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10565;old_locus_tag=BDI4_1900015 NZ_CAJZAS010000102.1 Protein Homology CDS 9875 10435 . - 0 ID=cds-WP_223961490.1;Parent=gene-LDO45_RS10565;Dbxref=GenBank:WP_223961490.1;Name=WP_223961490.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754598.1;locus_tag=LDO45_RS10565;product=GspH/FimT family pseudopilin;protein_id=WP_223961490.1;transl_table=11 NZ_CAJZAS010000102.1 RefSeq gene 10589 11068 . - . ID=gene-LDO45_RS10570;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=LDO45_RS10570;old_locus_tag=BDI4_1900016 NZ_CAJZAS010000102.1 Protein Homology CDS 10589 11068 . - 0 ID=cds-WP_006760615.1;Parent=gene-LDO45_RS10570;Dbxref=GenBank:WP_006760615.1;Name=WP_006760615.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476792.1;locus_tag=LDO45_RS10570;product=transcriptional regulator NrdR;protein_id=WP_006760615.1;transl_table=11 NZ_CAJZAS010000102.1 RefSeq pseudogene 11075 11367 . - . ID=gene-LDO45_RS10575;Name=glyA;end_range=11367,.;gbkey=Gene;gene=glyA;gene_biotype=pseudogene;locus_tag=LDO45_RS10575;old_locus_tag=BDI4_1900017;partial=true;pseudo=true NZ_CAJZAS010000102.1 Protein Homology CDS 11075 11367 . - 2 ID=cds-LDO45_RS10575;Parent=gene-LDO45_RS10575;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=11367,.;gbkey=CDS;gene=glyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018442488.1;locus_tag=LDO45_RS10575;partial=true;product=serine hydroxymethyltransferase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000103.1 1 849 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000103.1 RefSeq region 1 849 . + . ID=NZ_CAJZAS010000103.1:1..849;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_191 NZ_CAJZAS010000103.1 RefSeq gene 1 849 . + . ID=gene-LDO45_RS10580;Name=glyA;end_range=849,.;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=LDO45_RS10580;partial=true;start_range=.,1 NZ_CAJZAS010000103.1 Protein Homology CDS 1 849 . + 0 ID=cds-WP_223961493.1;Parent=gene-LDO45_RS10580;Dbxref=GenBank:WP_223961493.1;Name=WP_223961493.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;end_range=849,.;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018442488.1;locus_tag=LDO45_RS10580;partial=true;product=serine hydroxymethyltransferase;protein_id=WP_223961493.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAS010000104.1 1 515 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000104.1 RefSeq region 1 515 . + . ID=NZ_CAJZAS010000104.1:1..515;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_192 NZ_CAJZAS010000104.1 RefSeq pseudogene 1 345 . - . ID=gene-LDO45_RS10585;Name=LDO45_RS10585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS10585;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000104.1 Protein Homology CDS 1 345 . - 0 ID=cds-LDO45_RS10585;Parent=gene-LDO45_RS10585;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018525.5;locus_tag=LDO45_RS10585;partial=true;product=RBBP9/YdeN family alpha/beta hydrolase;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAS010000105.1 1 5370 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000105.1 RefSeq region 1 5370 . + . ID=NZ_CAJZAS010000105.1:1..5370;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_193 NZ_CAJZAS010000105.1 RefSeq gene 168 599 . + . ID=gene-LDO45_RS10590;Name=cadR;gbkey=Gene;gene=cadR;gene_biotype=protein_coding;locus_tag=LDO45_RS10590;old_locus_tag=BDI4_1930002 NZ_CAJZAS010000105.1 Protein Homology CDS 168 599 . + 0 ID=cds-WP_059531173.1;Parent=gene-LDO45_RS10590;Dbxref=GenBank:WP_059531173.1;Name=WP_059531173.1;Ontology_term=GO:0045893,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;gene=cadR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195850.1;locus_tag=LDO45_RS10590;product=Cd(II)/Pb(II)-responsive transcriptional regulator;protein_id=WP_059531173.1;transl_table=11 NZ_CAJZAS010000105.1 RefSeq gene 668 1240 . + . ID=gene-LDO45_RS10595;Name=LDO45_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10595;old_locus_tag=BDI4_1930004 NZ_CAJZAS010000105.1 Protein Homology CDS 668 1240 . + 0 ID=cds-WP_223961494.1;Parent=gene-LDO45_RS10595;Dbxref=GenBank:WP_223961494.1;Name=WP_223961494.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490876.1;locus_tag=LDO45_RS10595;product=PadR family transcriptional regulator;protein_id=WP_223961494.1;transl_table=11 NZ_CAJZAS010000105.1 RefSeq gene 1269 2699 . - . ID=gene-LDO45_RS10600;Name=LDO45_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10600;old_locus_tag=BDI4_1930005 NZ_CAJZAS010000105.1 Protein Homology CDS 1269 2699 . - 0 ID=cds-WP_223961496.1;Parent=gene-LDO45_RS10600;Dbxref=GenBank:WP_223961496.1;Name=WP_223961496.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755459.1;locus_tag=LDO45_RS10600;product=FAD-binding oxidoreductase;protein_id=WP_223961496.1;transl_table=11 NZ_CAJZAS010000105.1 RefSeq gene 2713 3501 . - . ID=gene-LDO45_RS10605;Name=LDO45_RS10605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10605;old_locus_tag=BDI4_1930006 NZ_CAJZAS010000105.1 Protein Homology CDS 2713 3501 . - 0 ID=cds-WP_223961498.1;Parent=gene-LDO45_RS10605;Dbxref=GenBank:WP_223961498.1;Name=WP_223961498.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477297.1;locus_tag=LDO45_RS10605;product=ABC transporter substrate-binding protein;protein_id=WP_223961498.1;transl_table=11 NZ_CAJZAS010000105.1 RefSeq gene 3616 4770 . - . ID=gene-LDO45_RS10610;Name=LDO45_RS10610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10610;old_locus_tag=BDI4_1930007 NZ_CAJZAS010000105.1 Protein Homology CDS 3616 4770 . - 0 ID=cds-WP_223961500.1;Parent=gene-LDO45_RS10610;Dbxref=GenBank:WP_223961500.1;Name=WP_223961500.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327613.1;locus_tag=LDO45_RS10610;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_223961500.1;transl_table=11 NZ_CAJZAS010000105.1 RefSeq pseudogene 5037 5370 . - . ID=gene-LDO45_RS10615;Name=LDO45_RS10615;end_range=5370,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS10615;old_locus_tag=BDI4_1930008;partial=true;pseudo=true NZ_CAJZAS010000105.1 Protein Homology CDS 5037 5370 . - 1 ID=cds-LDO45_RS10615;Parent=gene-LDO45_RS10615;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5370,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496301.1;locus_tag=LDO45_RS10615;partial=true;product=TetR/AcrR family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000106.1 1 6017 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000106.1 RefSeq region 1 6017 . + . ID=NZ_CAJZAS010000106.1:1..6017;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_194 NZ_CAJZAS010000106.1 RefSeq gene 1 709 . + . ID=gene-LDO45_RS10620;Name=LDO45_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10620;old_locus_tag=BDI4_1940001;partial=true;start_range=.,1 NZ_CAJZAS010000106.1 Protein Homology CDS 1 709 . + 1 ID=cds-WP_223961503.1;Parent=gene-LDO45_RS10620;Dbxref=GenBank:WP_223961503.1;Name=WP_223961503.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365963.1;locus_tag=LDO45_RS10620;partial=true;product=TolC family protein;protein_id=WP_223961503.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000106.1 RefSeq gene 865 2061 . - . ID=gene-LDO45_RS10625;Name=LDO45_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10625;old_locus_tag=BDI4_1940002 NZ_CAJZAS010000106.1 Protein Homology CDS 865 2061 . - 0 ID=cds-WP_223961505.1;Parent=gene-LDO45_RS10625;Dbxref=GenBank:WP_223961505.1;Name=WP_223961505.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365962.1;locus_tag=LDO45_RS10625;product=porin;protein_id=WP_223961505.1;transl_table=11 NZ_CAJZAS010000106.1 RefSeq gene 2552 3616 . - . ID=gene-LDO45_RS10630;Name=LDO45_RS10630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10630;old_locus_tag=BDI4_1940003 NZ_CAJZAS010000106.1 Protein Homology CDS 2552 3616 . - 0 ID=cds-WP_223961507.1;Parent=gene-LDO45_RS10630;Dbxref=GenBank:WP_223961507.1;Name=WP_223961507.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899515.1;locus_tag=LDO45_RS10630;product=phytoene/squalene synthase family protein;protein_id=WP_223961507.1;transl_table=11 NZ_CAJZAS010000106.1 RefSeq gene 3987 5132 . + . ID=gene-LDO45_RS10635;Name=LDO45_RS10635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10635;old_locus_tag=BDI4_1940004 NZ_CAJZAS010000106.1 Protein Homology CDS 3987 5132 . + 0 ID=cds-WP_223961508.1;Parent=gene-LDO45_RS10635;Dbxref=GenBank:WP_223961508.1;Name=WP_223961508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414326.1;locus_tag=LDO45_RS10635;product=glycerophosphodiester phosphodiesterase;protein_id=WP_223961508.1;transl_table=11 NZ_CAJZAS010000106.1 RefSeq gene 5232 6017 . - . ID=gene-LDO45_RS10640;Name=LDO45_RS10640;end_range=6017,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10640;old_locus_tag=BDI4_1940005;partial=true NZ_CAJZAS010000106.1 Protein Homology CDS 5232 6017 . - 0 ID=cds-WP_253074738.1;Parent=gene-LDO45_RS10640;Dbxref=GenBank:WP_253074738.1;Name=WP_253074738.1;end_range=6017,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365959.1;locus_tag=LDO45_RS10640;partial=true;product=rhodanese-like domain-containing protein;protein_id=WP_253074738.1;transl_table=11 ##sequence-region NZ_CAJZAS010000107.1 1 9719 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000107.1 RefSeq region 1 9719 . + . ID=NZ_CAJZAS010000107.1:1..9719;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_195 NZ_CAJZAS010000107.1 RefSeq gene 1 220 . - . ID=gene-LDO45_RS10645;Name=LDO45_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10645;partial=true;start_range=.,1 NZ_CAJZAS010000107.1 Protein Homology CDS 1 220 . - 0 ID=cds-WP_223961509.1;Parent=gene-LDO45_RS10645;Dbxref=GenBank:WP_223961509.1;Name=WP_223961509.1;Ontology_term=GO:0009245,GO:0005524,GO:0009029;gbkey=CDS;go_function=ATP binding|0005524||IEA,tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333983.1;locus_tag=LDO45_RS10645;partial=true;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_223961509.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000107.1 RefSeq gene 671 2053 . + . ID=gene-LDO45_RS10650;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=LDO45_RS10650;old_locus_tag=BDI4_1950002 NZ_CAJZAS010000107.1 Protein Homology CDS 671 2053 . + 0 ID=cds-WP_223961510.1;Parent=gene-LDO45_RS10650;Dbxref=GenBank:WP_223961510.1;Name=WP_223961510.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329091.1;locus_tag=LDO45_RS10650;product=exodeoxyribonuclease VII large subunit;protein_id=WP_223961510.1;transl_table=11 NZ_CAJZAS010000107.1 RefSeq gene 2294 2872 . + . ID=gene-LDO45_RS10655;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=LDO45_RS10655;old_locus_tag=BDI4_1950003 NZ_CAJZAS010000107.1 Protein Homology CDS 2294 2872 . + 0 ID=cds-WP_044848579.1;Parent=gene-LDO45_RS10655;Dbxref=GenBank:WP_044848579.1;Name=WP_044848579.1;gbkey=CDS;gene=sodB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024786.1;locus_tag=LDO45_RS10655;product=superoxide dismutase [Fe];protein_id=WP_044848579.1;transl_table=11 NZ_CAJZAS010000107.1 RefSeq gene 2985 4196 . - . ID=gene-LDO45_RS10660;Name=chrA;gbkey=Gene;gene=chrA;gene_biotype=protein_coding;locus_tag=LDO45_RS10660;old_locus_tag=BDI4_1950004 NZ_CAJZAS010000107.1 Protein Homology CDS 2985 4196 . - 0 ID=cds-WP_223961511.1;Parent=gene-LDO45_RS10660;Dbxref=GenBank:WP_223961511.1;Name=WP_223961511.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;gene=chrA;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694375.1;locus_tag=LDO45_RS10660;product=chromate efflux transporter;protein_id=WP_223961511.1;transl_table=11 NZ_CAJZAS010000107.1 RefSeq gene 4297 5004 . - . ID=gene-LDO45_RS10665;Name=LDO45_RS10665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10665;old_locus_tag=BDI4_1950005 NZ_CAJZAS010000107.1 Protein Homology CDS 4297 5004 . - 0 ID=cds-WP_059527781.1;Parent=gene-LDO45_RS10665;Dbxref=GenBank:WP_059527781.1;Name=WP_059527781.1;Ontology_term=GO:0006355,GO:0003700,GO:0030552;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,cAMP binding|0030552||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496467.1;locus_tag=LDO45_RS10665;product=Crp/Fnr family transcriptional regulator;protein_id=WP_059527781.1;transl_table=11 NZ_CAJZAS010000107.1 RefSeq gene 5086 5610 . + . ID=gene-LDO45_RS10670;Name=LDO45_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10670;old_locus_tag=BDI4_1950006 NZ_CAJZAS010000107.1 Protein Homology CDS 5086 5610 . + 0 ID=cds-WP_059820858.1;Parent=gene-LDO45_RS10670;Dbxref=GenBank:WP_059820858.1;Name=WP_059820858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496466.1;locus_tag=LDO45_RS10670;product=DUF962 domain-containing protein;protein_id=WP_059820858.1;transl_table=11 NZ_CAJZAS010000107.1 RefSeq gene 5784 6398 . + . ID=gene-LDO45_RS10675;Name=LDO45_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10675;old_locus_tag=BDI4_1950007 NZ_CAJZAS010000107.1 Protein Homology CDS 5784 6398 . + 0 ID=cds-WP_223961512.1;Parent=gene-LDO45_RS10675;Dbxref=GenBank:WP_223961512.1;Name=WP_223961512.1;Ontology_term=GO:0006744,GO:0032259,GO:0008425,GO:0061542,GO:0102208;gbkey=CDS;go_function=2-polyprenyl-6-methoxy-1%2C4-benzoquinone methyltransferase activity|0008425||IEA,3-demethylubiquinol-n 3-O-methyltransferase activity|0061542||IEA,2-polyprenyl-6-hydroxyphenol methylase activity|0102208||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755726.1;locus_tag=LDO45_RS10675;product=methyltransferase domain-containing protein;protein_id=WP_223961512.1;transl_table=11 NZ_CAJZAS010000107.1 RefSeq gene 6414 7688 . - . ID=gene-LDO45_RS10680;Name=LDO45_RS10680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10680;old_locus_tag=BDI4_1950008 NZ_CAJZAS010000107.1 Protein Homology CDS 6414 7688 . - 0 ID=cds-WP_223961513.1;Parent=gene-LDO45_RS10680;Dbxref=GenBank:WP_223961513.1;Name=WP_223961513.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024793.1;locus_tag=LDO45_RS10680;product=EAL domain-containing protein;protein_id=WP_223961513.1;transl_table=11 NZ_CAJZAS010000107.1 RefSeq gene 7873 9312 . - . ID=gene-LDO45_RS10685;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=LDO45_RS10685;old_locus_tag=BDI4_1950009 NZ_CAJZAS010000107.1 Protein Homology CDS 7873 9312 . - 0 ID=cds-WP_059690565.1;Parent=gene-LDO45_RS10685;Dbxref=GenBank:WP_059690565.1;Name=WP_059690565.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329084.1;locus_tag=LDO45_RS10685;product=multidrug transporter subunit MdtD;protein_id=WP_059690565.1;transl_table=11 NZ_CAJZAS010000107.1 RefSeq gene 9514 9719 . + . ID=gene-LDO45_RS10690;Name=LDO45_RS10690;end_range=9719,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10690;partial=true NZ_CAJZAS010000107.1 Protein Homology CDS 9514 9719 . + 0 ID=cds-WP_223961515.1;Parent=gene-LDO45_RS10690;Dbxref=GenBank:WP_223961515.1;Name=WP_223961515.1;end_range=9719,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755900.1;locus_tag=LDO45_RS10690;partial=true;product=DUF2917 domain-containing protein;protein_id=WP_223961515.1;transl_table=11 ##sequence-region NZ_CAJZAS010000108.1 1 613 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000108.1 RefSeq region 1 613 . + . ID=NZ_CAJZAS010000108.1:1..613;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_196 NZ_CAJZAS010000108.1 RefSeq pseudogene 1 448 . + . ID=gene-LDO45_RS10695;Name=LDO45_RS10695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS10695;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000108.1 Protein Homology CDS 1 448 . + 0 ID=cds-LDO45_RS10695;Parent=gene-LDO45_RS10695;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757858.1;locus_tag=LDO45_RS10695;partial=true;product=TonB-dependent receptor domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAS010000109.1 1 1797 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000109.1 RefSeq region 1 1797 . + . ID=NZ_CAJZAS010000109.1:1..1797;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_197 NZ_CAJZAS010000109.1 RefSeq gene 1 951 . + . ID=gene-LDO45_RS10700;Name=LDO45_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10700;partial=true;start_range=.,1 NZ_CAJZAS010000109.1 Protein Homology CDS 1 951 . + 0 ID=cds-WP_223961517.1;Parent=gene-LDO45_RS10700;Dbxref=GenBank:WP_223961517.1;Name=WP_223961517.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339215.1;locus_tag=LDO45_RS10700;partial=true;product=phage tail protein;protein_id=WP_223961517.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000109.1 RefSeq pseudogene 1060 1797 . - . ID=gene-LDO45_RS10705;Name=LDO45_RS10705;end_range=1797,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS10705;partial=true;pseudo=true NZ_CAJZAS010000109.1 Protein Homology CDS 1060 1797 . - 0 ID=cds-LDO45_RS10705;Parent=gene-LDO45_RS10705;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1797,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480289.1;locus_tag=LDO45_RS10705;partial=true;product=glycosyl transferase family 2;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000110.1 1 5371 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000110.1 RefSeq region 1 5371 . + . ID=NZ_CAJZAS010000110.1:1..5371;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_198 NZ_CAJZAS010000110.1 RefSeq gene 7 369 . - . ID=gene-LDO45_RS10710;Name=LDO45_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10710;old_locus_tag=BDI4_1980001 NZ_CAJZAS010000110.1 GeneMarkS-2+ CDS 7 369 . - 0 ID=cds-WP_223961519.1;Parent=gene-LDO45_RS10710;Dbxref=GenBank:WP_223961519.1;Name=WP_223961519.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS10710;product=hypothetical protein;protein_id=WP_223961519.1;transl_table=11 NZ_CAJZAS010000110.1 RefSeq gene 488 901 . - . ID=gene-LDO45_RS10715;Name=LDO45_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10715 NZ_CAJZAS010000110.1 GeneMarkS-2+ CDS 488 901 . - 0 ID=cds-WP_223961521.1;Parent=gene-LDO45_RS10715;Dbxref=GenBank:WP_223961521.1;Name=WP_223961521.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS10715;product=hypothetical protein;protein_id=WP_223961521.1;transl_table=11 NZ_CAJZAS010000110.1 RefSeq pseudogene 1187 1325 . - . ID=gene-LDO45_RS34535;Name=LDO45_RS34535;end_range=1325,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34535;partial=true;pseudo=true;start_range=.,1187 NZ_CAJZAS010000110.1 Protein Homology CDS 1187 1325 . - 0 ID=cds-LDO45_RS34535;Parent=gene-LDO45_RS34535;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=1325,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011519225.1;locus_tag=LDO45_RS34535;partial=true;product=RHS repeat-associated core domain-containing protein;pseudo=true;start_range=.,1187;transl_table=11 NZ_CAJZAS010000110.1 RefSeq gene 1344 1802 . - . ID=gene-LDO45_RS10725;Name=comJ;gbkey=Gene;gene=comJ;gene_biotype=protein_coding;locus_tag=LDO45_RS10725;old_locus_tag=BDI4_1980004 NZ_CAJZAS010000110.1 Protein Homology CDS 1344 1802 . - 0 ID=cds-WP_223961523.1;Parent=gene-LDO45_RS10725;Dbxref=GenBank:WP_223961523.1;Name=WP_223961523.1;gbkey=CDS;gene=comJ;inference=COORDINATES: protein motif:HMM:NF022486.5;locus_tag=LDO45_RS10725;product=competence protein ComJ;protein_id=WP_223961523.1;transl_table=11 NZ_CAJZAS010000110.1 RefSeq gene 1811 2566 . - . ID=gene-LDO45_RS34240;Name=LDO45_RS34240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34240;old_locus_tag=BDI4_1980005 NZ_CAJZAS010000110.1 Protein Homology CDS 1811 2566 . - 0 ID=cds-WP_290371012.1;Parent=gene-LDO45_RS34240;Dbxref=GenBank:WP_290371012.1;Name=WP_290371012.1;Ontology_term=GO:0030246;gbkey=CDS;go_function=carbohydrate binding|0030246||IEA;inference=COORDINATES: protein motif:HMM:TIGR03696.1;locus_tag=LDO45_RS34240;product=RHS repeat domain-containing protein;protein_id=WP_290371012.1;transl_table=11 NZ_CAJZAS010000110.1 RefSeq gene 2598 2961 . - . ID=gene-LDO45_RS10740;Name=LDO45_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10740;old_locus_tag=BDI4_1980006;partial=true;start_range=.,2598 NZ_CAJZAS010000110.1 Protein Homology CDS 2598 2961 . - 0 ID=cds-WP_308051207.1;Parent=gene-LDO45_RS10740;Dbxref=GenBank:WP_308051207.1;Name=WP_308051207.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017411.5;locus_tag=LDO45_RS10740;partial=true;product=hypothetical protein;protein_id=WP_308051207.1;start_range=.,2598;transl_table=11 NZ_CAJZAS010000110.1 RefSeq pseudogene 3296 4366 . - . ID=gene-LDO45_RS10745;Name=LDO45_RS10745;end_range=4366,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS10745;old_locus_tag=BDI4_1980008;partial=true;pseudo=true;start_range=.,3296 NZ_CAJZAS010000110.1 Protein Homology CDS 3296 4366 . - 0 ID=cds-LDO45_RS10745;Parent=gene-LDO45_RS10745;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=4366,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01643.1;locus_tag=LDO45_RS10745;partial=true;product=RHS family protein;pseudo=true;start_range=.,3296;transl_table=11 NZ_CAJZAS010000110.1 RefSeq gene 4377 4866 . - . ID=gene-LDO45_RS10750;Name=LDO45_RS10750;end_range=4866,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10750;old_locus_tag=BDI4_1980009;partial=true;start_range=.,4377 NZ_CAJZAS010000110.1 Protein Homology CDS 4377 4866 . - 0 ID=cds-WP_223961525.1;Parent=gene-LDO45_RS10750;Dbxref=GenBank:WP_223961525.1;Name=WP_223961525.1;end_range=4866,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040127.4;locus_tag=LDO45_RS10750;partial=true;product=DUF6531 domain-containing protein;protein_id=WP_223961525.1;start_range=.,4377;transl_table=11 ##sequence-region NZ_CAJZAS010000111.1 1 492 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000111.1 RefSeq region 1 492 . + . ID=NZ_CAJZAS010000111.1:1..492;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_199 NZ_CAJZAS010000111.1 RefSeq pseudogene 16 260 . - . ID=gene-LDO45_RS10755;Name=LDO45_RS10755;end_range=260,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS10755;old_locus_tag=BDI4_1990002;partial=true;pseudo=true NZ_CAJZAS010000111.1 Protein Homology CDS 16 260 . - 2 ID=cds-LDO45_RS10755;Parent=gene-LDO45_RS10755;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=260,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751816.1;locus_tag=LDO45_RS10755;partial=true;product=lysine transporter LysE;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000112.1 1 157180 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000112.1 RefSeq region 1 157180 . + . ID=NZ_CAJZAS010000112.1:1..157180;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_2 NZ_CAJZAS010000112.1 RefSeq pseudogene 1 272 . - . ID=gene-LDO45_RS10760;Name=LDO45_RS10760;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS10760;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000112.1 Protein Homology CDS 1 272 . - 0 ID=cds-LDO45_RS10760;Parent=gene-LDO45_RS10760;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498597.1;locus_tag=LDO45_RS10760;partial=true;product=cytochrome c biogenesis protein DipZ;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 308 841 . - . ID=gene-LDO45_RS10765;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=LDO45_RS10765;old_locus_tag=BDI4_20002 NZ_CAJZAS010000112.1 Protein Homology CDS 308 841 . - 0 ID=cds-WP_223961533.1;Parent=gene-LDO45_RS10765;Dbxref=GenBank:WP_223961533.1;Name=WP_223961533.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217807.1;locus_tag=LDO45_RS10765;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_223961533.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 1905 2726 . + . ID=gene-LDO45_RS10770;Name=cblB;gbkey=Gene;gene=cblB;gene_biotype=protein_coding;locus_tag=LDO45_RS10770;old_locus_tag=BDI4_20005 NZ_CAJZAS010000112.1 Protein Homology CDS 1905 2726 . + 0 ID=cds-WP_059447392.1;Parent=gene-LDO45_RS10770;Dbxref=GenBank:WP_059447392.1;Name=WP_059447392.1;gbkey=CDS;gene=cblB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485025.1;locus_tag=LDO45_RS10770;product=cable pilus chaperone CblB;protein_id=WP_059447392.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 2730 3230 . + . ID=gene-LDO45_RS10775;Name=cblA;gbkey=Gene;gene=cblA;gene_biotype=protein_coding;locus_tag=LDO45_RS10775;old_locus_tag=BDI4_20006 NZ_CAJZAS010000112.1 Protein Homology CDS 2730 3230 . + 0 ID=cds-WP_059447391.1;Parent=gene-LDO45_RS10775;Dbxref=GenBank:WP_059447391.1;Name=WP_059447391.1;gbkey=CDS;gene=cblA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485048.1;locus_tag=LDO45_RS10775;product=cable pilus major pilin CblA;protein_id=WP_059447391.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 3315 6017 . + . ID=gene-LDO45_RS10780;Name=cblC;gbkey=Gene;gene=cblC;gene_biotype=protein_coding;locus_tag=LDO45_RS10780;old_locus_tag=BDI4_20007 NZ_CAJZAS010000112.1 Protein Homology CDS 3315 6017 . + 0 ID=cds-WP_223961536.1;Parent=gene-LDO45_RS10780;Dbxref=GenBank:WP_223961536.1;Name=WP_223961536.1;gbkey=CDS;gene=cblC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_198429488.1;locus_tag=LDO45_RS10780;product=cable pilus usher protein CblC;protein_id=WP_223961536.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 6093 7259 . + . ID=gene-LDO45_RS10785;Name=LDO45_RS10785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10785;old_locus_tag=BDI4_20008 NZ_CAJZAS010000112.1 Protein Homology CDS 6093 7259 . + 0 ID=cds-WP_223961695.1;Parent=gene-LDO45_RS10785;Dbxref=GenBank:WP_223961695.1;Name=WP_223961695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485017.1;locus_tag=LDO45_RS10785;product=CfaE/CblD family pilus tip adhesin;protein_id=WP_223961695.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 7259 7441 . + . ID=gene-LDO45_RS10790;Name=LDO45_RS10790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10790;old_locus_tag=BDI4_20009 NZ_CAJZAS010000112.1 GeneMarkS-2+ CDS 7259 7441 . + 0 ID=cds-WP_223961537.1;Parent=gene-LDO45_RS10790;Dbxref=GenBank:WP_223961537.1;Name=WP_223961537.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS10790;product=CS1 type fimbrial major subunit;protein_id=WP_223961537.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 7718 8887 . + . ID=gene-LDO45_RS10795;Name=LDO45_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10795;old_locus_tag=BDI4_20010 NZ_CAJZAS010000112.1 Protein Homology CDS 7718 8887 . + 0 ID=cds-WP_223961539.1;Parent=gene-LDO45_RS10795;Dbxref=GenBank:WP_223961539.1;Name=WP_223961539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485017.1;locus_tag=LDO45_RS10795;product=CfaE/CblD family pilus tip adhesin;protein_id=WP_223961539.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 8911 10053 . - . ID=gene-LDO45_RS10800;Name=LDO45_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10800;old_locus_tag=BDI4_20011 NZ_CAJZAS010000112.1 Protein Homology CDS 8911 10053 . - 0 ID=cds-WP_223961541.1;Parent=gene-LDO45_RS10800;Dbxref=GenBank:WP_223961541.1;Name=WP_223961541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363463.1;locus_tag=LDO45_RS10800;product=FAD binding domain-containing protein;protein_id=WP_223961541.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 10091 10213 . - . ID=gene-LDO45_RS34245;Name=LDO45_RS34245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34245 NZ_CAJZAS010000112.1 GeneMarkS-2+ CDS 10091 10213 . - 0 ID=cds-WP_290371014.1;Parent=gene-LDO45_RS34245;Dbxref=GenBank:WP_290371014.1;Name=WP_290371014.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34245;product=hypothetical protein;protein_id=WP_290371014.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 10343 11062 . - . ID=gene-LDO45_RS10805;Name=LDO45_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10805;old_locus_tag=BDI4_20012 NZ_CAJZAS010000112.1 Protein Homology CDS 10343 11062 . - 0 ID=cds-WP_223961543.1;Parent=gene-LDO45_RS10805;Dbxref=GenBank:WP_223961543.1;Name=WP_223961543.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100292.1;locus_tag=LDO45_RS10805;product=TetR/AcrR family transcriptional regulator;protein_id=WP_223961543.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 11429 12154 . + . ID=gene-LDO45_RS10810;Name=LDO45_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10810;old_locus_tag=BDI4_20013 NZ_CAJZAS010000112.1 Protein Homology CDS 11429 12154 . + 0 ID=cds-WP_059534426.1;Parent=gene-LDO45_RS10810;Dbxref=GenBank:WP_059534426.1;Name=WP_059534426.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337462.1;locus_tag=LDO45_RS10810;product=YoaK family protein;protein_id=WP_059534426.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 12204 13145 . + . ID=gene-LDO45_RS10815;Name=LDO45_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10815;old_locus_tag=BDI4_20014 NZ_CAJZAS010000112.1 Protein Homology CDS 12204 13145 . + 0 ID=cds-WP_059534424.1;Parent=gene-LDO45_RS10815;Dbxref=GenBank:WP_059534424.1;Name=WP_059534424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758728.1;locus_tag=LDO45_RS10815;product=hypothetical protein;protein_id=WP_059534424.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 13160 14602 . + . ID=gene-LDO45_RS10820;Name=LDO45_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10820;old_locus_tag=BDI4_20015 NZ_CAJZAS010000112.1 Protein Homology CDS 13160 14602 . + 0 ID=cds-WP_223961546.1;Parent=gene-LDO45_RS10820;Dbxref=GenBank:WP_223961546.1;Name=WP_223961546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337468.1;locus_tag=LDO45_RS10820;product=alginate export family protein;protein_id=WP_223961546.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 14621 15526 . - . ID=gene-LDO45_RS10825;Name=LDO45_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10825;old_locus_tag=BDI4_20016 NZ_CAJZAS010000112.1 Protein Homology CDS 14621 15526 . - 0 ID=cds-WP_059534422.1;Parent=gene-LDO45_RS10825;Dbxref=GenBank:WP_059534422.1;Name=WP_059534422.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545679.1;locus_tag=LDO45_RS10825;product=LysR family transcriptional regulator;protein_id=WP_059534422.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 15631 16281 . + . ID=gene-LDO45_RS10830;Name=LDO45_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10830;old_locus_tag=BDI4_20017 NZ_CAJZAS010000112.1 Protein Homology CDS 15631 16281 . + 0 ID=cds-WP_223961547.1;Parent=gene-LDO45_RS10830;Dbxref=GenBank:WP_223961547.1;Name=WP_223961547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011004206.1;locus_tag=LDO45_RS10830;product=DsbA family oxidoreductase;protein_id=WP_223961547.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 16554 17462 . - . ID=gene-LDO45_RS10835;Name=LDO45_RS10835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10835;old_locus_tag=BDI4_20018 NZ_CAJZAS010000112.1 Protein Homology CDS 16554 17462 . - 0 ID=cds-WP_223961548.1;Parent=gene-LDO45_RS10835;Dbxref=GenBank:WP_223961548.1;Name=WP_223961548.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498483.1;locus_tag=LDO45_RS10835;product=AraC family transcriptional regulator;protein_id=WP_223961548.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 17880 20780 . + . ID=gene-LDO45_RS10840;Name=LDO45_RS10840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10840;old_locus_tag=BDI4_20020 NZ_CAJZAS010000112.1 Protein Homology CDS 17880 20780 . + 0 ID=cds-WP_223961549.1;Parent=gene-LDO45_RS10840;Dbxref=GenBank:WP_223961549.1;Name=WP_223961549.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751572.1;locus_tag=LDO45_RS10840;product=winged helix-turn-helix domain-containing protein;protein_id=WP_223961549.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 20901 22781 . + . ID=gene-LDO45_RS10845;Name=LDO45_RS10845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10845;old_locus_tag=BDI4_20021 NZ_CAJZAS010000112.1 Protein Homology CDS 20901 22781 . + 0 ID=cds-WP_223961550.1;Parent=gene-LDO45_RS10845;Dbxref=GenBank:WP_223961550.1;Name=WP_223961550.1;Ontology_term=GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012371993.1;locus_tag=LDO45_RS10845;product=amidohydrolase;protein_id=WP_223961550.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 22877 23548 . + . ID=gene-LDO45_RS10850;Name=LDO45_RS10850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10850;old_locus_tag=BDI4_20022 NZ_CAJZAS010000112.1 Protein Homology CDS 22877 23548 . + 0 ID=cds-WP_059698926.1;Parent=gene-LDO45_RS10850;Dbxref=GenBank:WP_059698926.1;Name=WP_059698926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760334.1;locus_tag=LDO45_RS10850;product=hypothetical protein;protein_id=WP_059698926.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 23626 24738 . - . ID=gene-LDO45_RS10855;Name=LDO45_RS10855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10855;old_locus_tag=BDI4_20023 NZ_CAJZAS010000112.1 Protein Homology CDS 23626 24738 . - 0 ID=cds-WP_059690261.1;Parent=gene-LDO45_RS10855;Dbxref=GenBank:WP_059690261.1;Name=WP_059690261.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751575.1;locus_tag=LDO45_RS10855;product=alkene reductase;protein_id=WP_059690261.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 24900 26117 . - . ID=gene-LDO45_RS10860;Name=LDO45_RS10860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10860;old_locus_tag=BDI4_20024 NZ_CAJZAS010000112.1 Protein Homology CDS 24900 26117 . - 0 ID=cds-WP_059534411.1;Parent=gene-LDO45_RS10860;Dbxref=GenBank:WP_059534411.1;Name=WP_059534411.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751576.1;locus_tag=LDO45_RS10860;product=MFS transporter;protein_id=WP_059534411.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 26116 26331 . + . ID=gene-LDO45_RS10865;Name=LDO45_RS10865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10865 NZ_CAJZAS010000112.1 GeneMarkS-2+ CDS 26116 26331 . + 0 ID=cds-WP_223961551.1;Parent=gene-LDO45_RS10865;Dbxref=GenBank:WP_223961551.1;Name=WP_223961551.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS10865;product=hypothetical protein;protein_id=WP_223961551.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 26462 27379 . - . ID=gene-LDO45_RS10870;Name=LDO45_RS10870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10870;old_locus_tag=BDI4_20025 NZ_CAJZAS010000112.1 Protein Homology CDS 26462 27379 . - 0 ID=cds-WP_175911423.1;Parent=gene-LDO45_RS10870;Dbxref=GenBank:WP_175911423.1;Name=WP_175911423.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100311.1;locus_tag=LDO45_RS10870;product=LysR family transcriptional regulator;protein_id=WP_175911423.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 27450 29711 . - . ID=gene-LDO45_RS10875;Name=LDO45_RS10875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10875;old_locus_tag=BDI4_20026 NZ_CAJZAS010000112.1 Protein Homology CDS 27450 29711 . - 0 ID=cds-WP_223961552.1;Parent=gene-LDO45_RS10875;Dbxref=GenBank:WP_223961552.1;Name=WP_223961552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880441.1;locus_tag=LDO45_RS10875;product=molybdopterin cofactor-binding domain-containing protein;protein_id=WP_223961552.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 29711 30211 . - . ID=gene-LDO45_RS10880;Name=LDO45_RS10880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10880;old_locus_tag=BDI4_20027 NZ_CAJZAS010000112.1 Protein Homology CDS 29711 30211 . - 0 ID=cds-WP_059534405.1;Parent=gene-LDO45_RS10880;Dbxref=GenBank:WP_059534405.1;Name=WP_059534405.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767254.1;locus_tag=LDO45_RS10880;product=(2Fe-2S)-binding protein;protein_id=WP_059534405.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 30208 31488 . - . ID=gene-LDO45_RS10885;Name=LDO45_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10885;old_locus_tag=BDI4_20028 NZ_CAJZAS010000112.1 Protein Homology CDS 30208 31488 . - 0 ID=cds-WP_223961554.1;Parent=gene-LDO45_RS10885;Dbxref=GenBank:WP_223961554.1;Name=WP_223961554.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481364.1;locus_tag=LDO45_RS10885;product=cytochrome c;protein_id=WP_223961554.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 31941 33065 . - . ID=gene-LDO45_RS10890;Name=LDO45_RS10890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10890;old_locus_tag=BDI4_20030 NZ_CAJZAS010000112.1 Protein Homology CDS 31941 33065 . - 0 ID=cds-WP_253074741.1;Parent=gene-LDO45_RS10890;Dbxref=GenBank:WP_253074741.1;Name=WP_253074741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352111.1;locus_tag=LDO45_RS10890;product=FAD binding domain-containing protein;protein_id=WP_253074741.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 33233 34378 . - . ID=gene-LDO45_RS10895;Name=LDO45_RS10895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10895;old_locus_tag=BDI4_20031 NZ_CAJZAS010000112.1 Protein Homology CDS 33233 34378 . - 0 ID=cds-WP_223961558.1;Parent=gene-LDO45_RS10895;Dbxref=GenBank:WP_223961558.1;Name=WP_223961558.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726102.1;locus_tag=LDO45_RS10895;product=amidohydrolase family protein;protein_id=WP_223961558.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 34375 36054 . - . ID=gene-LDO45_RS10900;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=LDO45_RS10900;old_locus_tag=BDI4_20032 NZ_CAJZAS010000112.1 Protein Homology CDS 34375 36054 . - 0 ID=cds-WP_223961560.1;Parent=gene-LDO45_RS10900;Dbxref=GenBank:WP_223961560.1;Name=WP_223961560.1;gbkey=CDS;gene=actP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352112.1;locus_tag=LDO45_RS10900;product=cation/acetate symporter ActP;protein_id=WP_223961560.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 36051 36410 . - . ID=gene-LDO45_RS10905;Name=LDO45_RS10905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10905;old_locus_tag=BDI4_20033 NZ_CAJZAS010000112.1 Protein Homology CDS 36051 36410 . - 0 ID=cds-WP_223961562.1;Parent=gene-LDO45_RS10905;Dbxref=GenBank:WP_223961562.1;Name=WP_223961562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726100.1;locus_tag=LDO45_RS10905;product=DUF485 domain-containing protein;protein_id=WP_223961562.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 36501 37727 . - . ID=gene-LDO45_RS10910;Name=LDO45_RS10910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10910;old_locus_tag=BDI4_20034 NZ_CAJZAS010000112.1 Protein Homology CDS 36501 37727 . - 0 ID=cds-WP_223961564.1;Parent=gene-LDO45_RS10910;Dbxref=GenBank:WP_223961564.1;Name=WP_223961564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726099.1;locus_tag=LDO45_RS10910;product=FAD binding domain-containing protein;protein_id=WP_223961564.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 37729 38217 . - . ID=gene-LDO45_RS10915;Name=LDO45_RS10915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10915;old_locus_tag=BDI4_20035 NZ_CAJZAS010000112.1 Protein Homology CDS 37729 38217 . - 0 ID=cds-WP_223961566.1;Parent=gene-LDO45_RS10915;Dbxref=GenBank:WP_223961566.1;Name=WP_223961566.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352115.1;locus_tag=LDO45_RS10915;product=VOC family protein;protein_id=WP_223961566.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 38352 38624 . - . ID=gene-LDO45_RS10920;Name=LDO45_RS10920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10920;old_locus_tag=BDI4_20036 NZ_CAJZAS010000112.1 Protein Homology CDS 38352 38624 . - 0 ID=cds-WP_059534396.1;Parent=gene-LDO45_RS10920;Dbxref=GenBank:WP_059534396.1;Name=WP_059534396.1;Ontology_term=GO:0016579,GO:0043161,GO:0004843;gbkey=CDS;go_function=cysteine-type deubiquitinase activity|0004843||IEA;go_process=protein deubiquitination|0016579||IEA,proteasome-mediated ubiquitin-dependent protein catabolic process|0043161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481362.1;locus_tag=LDO45_RS10920;product=ubiquitin carboxyl-terminal hydrolase 14;protein_id=WP_059534396.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 38834 40099 . + . ID=gene-LDO45_RS10925;Name=LDO45_RS10925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10925;old_locus_tag=BDI4_20037 NZ_CAJZAS010000112.1 Protein Homology CDS 38834 40099 . + 0 ID=cds-WP_223961569.1;Parent=gene-LDO45_RS10925;Dbxref=GenBank:WP_223961569.1;Name=WP_223961569.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337481.1;locus_tag=LDO45_RS10925;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_223961569.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 40138 45222 . - . ID=gene-LDO45_RS10930;Name=LDO45_RS10930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10930;old_locus_tag=BDI4_20038 NZ_CAJZAS010000112.1 Protein Homology CDS 40138 45222 . - 0 ID=cds-WP_223961571.1;Parent=gene-LDO45_RS10930;Dbxref=GenBank:WP_223961571.1;Name=WP_223961571.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024589.5;locus_tag=LDO45_RS10930;product=ATP-binding sensor histidine kinase;protein_id=WP_223961571.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 45569 47056 . + . ID=gene-LDO45_RS10935;Name=LDO45_RS10935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10935;old_locus_tag=BDI4_20039 NZ_CAJZAS010000112.1 Protein Homology CDS 45569 47056 . + 0 ID=cds-WP_223961573.1;Parent=gene-LDO45_RS10935;Dbxref=GenBank:WP_223961573.1;Name=WP_223961573.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012698.5;locus_tag=LDO45_RS10935;product=winged helix-turn-helix domain-containing protein;protein_id=WP_223961573.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 47112 47483 . + . ID=gene-LDO45_RS10940;Name=LDO45_RS10940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10940;old_locus_tag=BDI4_20040 NZ_CAJZAS010000112.1 Protein Homology CDS 47112 47483 . + 0 ID=cds-WP_059534390.1;Parent=gene-LDO45_RS10940;Dbxref=GenBank:WP_059534390.1;Name=WP_059534390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013092695.1;locus_tag=LDO45_RS10940;product=response regulator transcription factor;protein_id=WP_059534390.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 47602 48258 . + . ID=gene-LDO45_RS10945;Name=LDO45_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10945;old_locus_tag=BDI4_20041 NZ_CAJZAS010000112.1 Protein Homology CDS 47602 48258 . + 0 ID=cds-WP_223961575.1;Parent=gene-LDO45_RS10945;Dbxref=GenBank:WP_223961575.1;Name=WP_223961575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016347785.1;locus_tag=LDO45_RS10945;product=response regulator transcription factor;protein_id=WP_223961575.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 48333 49757 . - . ID=gene-LDO45_RS10950;Name=LDO45_RS10950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10950;old_locus_tag=BDI4_20042 NZ_CAJZAS010000112.1 Protein Homology CDS 48333 49757 . - 0 ID=cds-WP_223961576.1;Parent=gene-LDO45_RS10950;Dbxref=GenBank:WP_223961576.1;Name=WP_223961576.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337482.1;locus_tag=LDO45_RS10950;product=efflux transporter outer membrane subunit;protein_id=WP_223961576.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 49754 50821 . - . ID=gene-LDO45_RS10955;Name=LDO45_RS10955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10955;old_locus_tag=BDI4_20043 NZ_CAJZAS010000112.1 Protein Homology CDS 49754 50821 . - 0 ID=cds-WP_223961578.1;Parent=gene-LDO45_RS10955;Dbxref=GenBank:WP_223961578.1;Name=WP_223961578.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694987.1;locus_tag=LDO45_RS10955;product=HlyD family secretion protein;protein_id=WP_223961578.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 50866 52446 . + . ID=gene-LDO45_RS10960;Name=LDO45_RS10960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10960;old_locus_tag=BDI4_20044 NZ_CAJZAS010000112.1 Protein Homology CDS 50866 52446 . + 0 ID=cds-WP_223961579.1;Parent=gene-LDO45_RS10960;Dbxref=GenBank:WP_223961579.1;Name=WP_223961579.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545664.1;locus_tag=LDO45_RS10960;product=MFS transporter;protein_id=WP_223961579.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 52577 53398 . - . ID=gene-LDO45_RS10965;Name=LDO45_RS10965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10965;old_locus_tag=BDI4_20045 NZ_CAJZAS010000112.1 Protein Homology CDS 52577 53398 . - 0 ID=cds-WP_223961581.1;Parent=gene-LDO45_RS10965;Dbxref=GenBank:WP_223961581.1;Name=WP_223961581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010108042.1;locus_tag=LDO45_RS10965;product=alpha/beta fold hydrolase;protein_id=WP_223961581.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 53956 54381 . + . ID=gene-LDO45_RS10970;Name=LDO45_RS10970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10970;old_locus_tag=BDI4_20046 NZ_CAJZAS010000112.1 Protein Homology CDS 53956 54381 . + 0 ID=cds-WP_059698900.1;Parent=gene-LDO45_RS10970;Dbxref=GenBank:WP_059698900.1;Name=WP_059698900.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012371986.1;locus_tag=LDO45_RS10970;product=DUF3331 domain-containing protein;protein_id=WP_059698900.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 54407 55048 . - . ID=gene-LDO45_RS10975;Name=LDO45_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10975;old_locus_tag=BDI4_20047 NZ_CAJZAS010000112.1 Protein Homology CDS 54407 55048 . - 0 ID=cds-WP_223961583.1;Parent=gene-LDO45_RS10975;Dbxref=GenBank:WP_223961583.1;Name=WP_223961583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335693.1;locus_tag=LDO45_RS10975;product=HD domain-containing protein;protein_id=WP_223961583.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 55047 55352 . + . ID=gene-LDO45_RS10980;Name=LDO45_RS10980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10980 NZ_CAJZAS010000112.1 GeneMarkS-2+ CDS 55047 55352 . + 0 ID=cds-WP_223961585.1;Parent=gene-LDO45_RS10980;Dbxref=GenBank:WP_223961585.1;Name=WP_223961585.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS10980;product=hypothetical protein;protein_id=WP_223961585.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 55546 57318 . + . ID=gene-LDO45_RS10985;Name=LDO45_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10985;old_locus_tag=BDI4_20048 NZ_CAJZAS010000112.1 Protein Homology CDS 55546 57318 . + 0 ID=cds-WP_223961587.1;Parent=gene-LDO45_RS10985;Dbxref=GenBank:WP_223961587.1;Name=WP_223961587.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337488.1;locus_tag=LDO45_RS10985;product=winged helix-turn-helix domain-containing protein;protein_id=WP_223961587.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 57513 58976 . + . ID=gene-LDO45_RS10990;Name=LDO45_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10990;old_locus_tag=BDI4_20049 NZ_CAJZAS010000112.1 Protein Homology CDS 57513 58976 . + 0 ID=cds-WP_059690240.1;Parent=gene-LDO45_RS10990;Dbxref=GenBank:WP_059690240.1;Name=WP_059690240.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545658.1;locus_tag=LDO45_RS10990;product=mechanosensitive ion channel family protein;protein_id=WP_059690240.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 59003 59911 . - . ID=gene-LDO45_RS10995;Name=LDO45_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS10995;old_locus_tag=BDI4_20050 NZ_CAJZAS010000112.1 Protein Homology CDS 59003 59911 . - 0 ID=cds-WP_223961589.1;Parent=gene-LDO45_RS10995;Dbxref=GenBank:WP_223961589.1;Name=WP_223961589.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660706.1;locus_tag=LDO45_RS10995;product=LysR family transcriptional regulator;protein_id=WP_223961589.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 60066 60347 . - . ID=gene-LDO45_RS11000;Name=LDO45_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11000;old_locus_tag=BDI4_20051 NZ_CAJZAS010000112.1 Protein Homology CDS 60066 60347 . - 0 ID=cds-WP_223961591.1;Parent=gene-LDO45_RS11000;Dbxref=GenBank:WP_223961591.1;Name=WP_223961591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484374.1;locus_tag=LDO45_RS11000;product=XapX domain-containing protein;protein_id=WP_223961591.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 60656 61342 . + . ID=gene-LDO45_RS11005;Name=LDO45_RS11005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11005;old_locus_tag=BDI4_20052 NZ_CAJZAS010000112.1 Protein Homology CDS 60656 61342 . + 0 ID=cds-WP_059534377.1;Parent=gene-LDO45_RS11005;Dbxref=GenBank:WP_059534377.1;Name=WP_059534377.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337464.1;locus_tag=LDO45_RS11005;product=hydrolase;protein_id=WP_059534377.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 61512 61679 . + . ID=gene-LDO45_RS11010;Name=LDO45_RS11010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11010;old_locus_tag=BDI4_20053 NZ_CAJZAS010000112.1 Protein Homology CDS 61512 61679 . + 0 ID=cds-WP_059534375.1;Parent=gene-LDO45_RS11010;Dbxref=GenBank:WP_059534375.1;Name=WP_059534375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897309.1;locus_tag=LDO45_RS11010;product=DUF1427 family protein;protein_id=WP_059534375.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 61699 62056 . + . ID=gene-LDO45_RS11015;Name=LDO45_RS11015;end_range=62056,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11015;old_locus_tag=BDI4_20054;partial=true NZ_CAJZAS010000112.1 Protein Homology CDS 61699 62056 . + 0 ID=cds-WP_223961593.1;Parent=gene-LDO45_RS11015;Dbxref=GenBank:WP_223961593.1;Name=WP_223961593.1;end_range=62056,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019581.5;locus_tag=LDO45_RS11015;partial=true;product=amidohydrolase family protein;protein_id=WP_223961593.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 62034 62494 . + . ID=gene-LDO45_RS11020;Name=LDO45_RS11020;end_range=62494,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11020;old_locus_tag=BDI4_20055;partial=true NZ_CAJZAS010000112.1 Protein Homology CDS 62034 62494 . + 0 ID=cds-WP_223961594.1;Parent=gene-LDO45_RS11020;Dbxref=GenBank:WP_223961594.1;Name=WP_223961594.1;end_range=62494,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019581.5;locus_tag=LDO45_RS11020;partial=true;product=amidohydrolase family protein;protein_id=WP_223961594.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 63010 63456 . + . ID=gene-LDO45_RS11025;Name=LDO45_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11025;old_locus_tag=BDI4_20058 NZ_CAJZAS010000112.1 Protein Homology CDS 63010 63456 . + 0 ID=cds-WP_223961596.1;Parent=gene-LDO45_RS11025;Dbxref=GenBank:WP_223961596.1;Name=WP_223961596.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013092656.1;locus_tag=LDO45_RS11025;product=DoxX family protein;protein_id=WP_223961596.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 63589 63993 . - . ID=gene-LDO45_RS11030;Name=LDO45_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11030;old_locus_tag=BDI4_20059 NZ_CAJZAS010000112.1 Protein Homology CDS 63589 63993 . - 0 ID=cds-WP_223961598.1;Parent=gene-LDO45_RS11030;Dbxref=GenBank:WP_223961598.1;Name=WP_223961598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012371971.1;locus_tag=LDO45_RS11030;product=cupin domain-containing protein;protein_id=WP_223961598.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 63998 64477 . - . ID=gene-LDO45_RS11035;Name=LDO45_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11035;old_locus_tag=BDI4_20060 NZ_CAJZAS010000112.1 Protein Homology CDS 63998 64477 . - 0 ID=cds-WP_059692405.1;Parent=gene-LDO45_RS11035;Dbxref=GenBank:WP_059692405.1;Name=WP_059692405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759573.1;locus_tag=LDO45_RS11035;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_059692405.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 64625 65125 . - . ID=gene-LDO45_RS11040;Name=LDO45_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11040;old_locus_tag=BDI4_20061 NZ_CAJZAS010000112.1 Protein Homology CDS 64625 65125 . - 0 ID=cds-WP_223961600.1;Parent=gene-LDO45_RS11040;Dbxref=GenBank:WP_223961600.1;Name=WP_223961600.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012371970.1;locus_tag=LDO45_RS11040;product=Ohr family peroxiredoxin;protein_id=WP_223961600.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 65324 66844 . - . ID=gene-LDO45_RS11045;Name=LDO45_RS11045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11045;old_locus_tag=BDI4_20062 NZ_CAJZAS010000112.1 Protein Homology CDS 65324 66844 . - 0 ID=cds-WP_223961602.1;Parent=gene-LDO45_RS11045;Dbxref=GenBank:WP_223961602.1;Name=WP_223961602.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012371953.1;locus_tag=LDO45_RS11045;product=PLP-dependent aminotransferase family protein;protein_id=WP_223961602.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 67038 67781 . + . ID=gene-LDO45_RS11050;Name=LDO45_RS11050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11050;old_locus_tag=BDI4_20063 NZ_CAJZAS010000112.1 Protein Homology CDS 67038 67781 . + 0 ID=cds-WP_223961604.1;Parent=gene-LDO45_RS11050;Dbxref=GenBank:WP_223961604.1;Name=WP_223961604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660685.1;locus_tag=LDO45_RS11050;product=SDR family oxidoreductase;protein_id=WP_223961604.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 67865 68902 . + . ID=gene-LDO45_RS11055;Name=LDO45_RS11055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11055;old_locus_tag=BDI4_20064 NZ_CAJZAS010000112.1 Protein Homology CDS 67865 68902 . + 0 ID=cds-WP_223961605.1;Parent=gene-LDO45_RS11055;Dbxref=GenBank:WP_223961605.1;Name=WP_223961605.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660684.1;locus_tag=LDO45_RS11055;product=LysR family transcriptional regulator;protein_id=WP_223961605.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 68989 70020 . - . ID=gene-LDO45_RS11060;Name=LDO45_RS11060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11060;old_locus_tag=BDI4_20065 NZ_CAJZAS010000112.1 Protein Homology CDS 68989 70020 . - 0 ID=cds-WP_223961607.1;Parent=gene-LDO45_RS11060;Dbxref=GenBank:WP_223961607.1;Name=WP_223961607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725535.1;locus_tag=LDO45_RS11060;product=ABC transporter substrate-binding protein;protein_id=WP_223961607.1;transl_table=11 NZ_CAJZAS010000112.1 cmsearch riboswitch 70157 70278 . - . ID=id-NZ_CAJZAS010000112.1:70157..70278;Dbxref=RFAM:RF00442;Note=guanidine-I (ykkC/yxkD leader) riboswitch%3B Guanidine-I riboswitches control genes whose products are involved in modification or pumping out guanidine as a toxic compound from bacteria%3B This is class of guanidine riboswitches is based on the ykkC/yxkD leader.;bound_moiety=guanidine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAS010000112.1 cmsearch riboswitch 70720 70853 . + . ID=id-NZ_CAJZAS010000112.1:70720..70853;Dbxref=RFAM:RF00442;Note=guanidine-I (ykkC/yxkD leader) riboswitch%3B Guanidine-I riboswitches control genes whose products are involved in modification or pumping out guanidine as a toxic compound from bacteria%3B This is class of guanidine riboswitches is based on the ykkC/yxkD leader.;bound_moiety=guanidine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAS010000112.1 RefSeq gene 70911 71672 . + . ID=gene-LDO45_RS11065;Name=LDO45_RS11065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11065;old_locus_tag=BDI4_20069 NZ_CAJZAS010000112.1 Protein Homology CDS 70911 71672 . + 0 ID=cds-WP_059701048.1;Parent=gene-LDO45_RS11065;Dbxref=GenBank:WP_059701048.1;Name=WP_059701048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485567.1;locus_tag=LDO45_RS11065;product=urea amidolyase associated protein UAAP1;protein_id=WP_059701048.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 71683 72339 . + . ID=gene-LDO45_RS11070;Name=LDO45_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11070;old_locus_tag=BDI4_20070 NZ_CAJZAS010000112.1 Protein Homology CDS 71683 72339 . + 0 ID=cds-WP_059525762.1;Parent=gene-LDO45_RS11070;Dbxref=GenBank:WP_059525762.1;Name=WP_059525762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413541.1;locus_tag=LDO45_RS11070;product=urea amidolyase associated protein UAAP2;protein_id=WP_059525762.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 72377 75967 . + . ID=gene-LDO45_RS11075;Name=uca;gbkey=Gene;gene=uca;gene_biotype=protein_coding;locus_tag=LDO45_RS11075;old_locus_tag=BDI4_20071 NZ_CAJZAS010000112.1 Protein Homology CDS 72377 75967 . + 0 ID=cds-WP_223961608.1;Parent=gene-LDO45_RS11075;Dbxref=GenBank:WP_223961608.1;Name=WP_223961608.1;Ontology_term=GO:0019627,GO:0004847;gbkey=CDS;gene=uca;go_function=urea carboxylase activity|0004847||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485552.1;locus_tag=LDO45_RS11075;product=urea carboxylase;protein_id=WP_223961608.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 75964 77835 . + . ID=gene-LDO45_RS11080;Name=atzF;gbkey=Gene;gene=atzF;gene_biotype=protein_coding;locus_tag=LDO45_RS11080;old_locus_tag=BDI4_20072 NZ_CAJZAS010000112.1 Protein Homology CDS 75964 77835 . + 0 ID=cds-WP_223961610.1;Parent=gene-LDO45_RS11080;Dbxref=GenBank:WP_223961610.1;Name=WP_223961610.1;Ontology_term=GO:0019627,GO:0004039;gbkey=CDS;gene=atzF;go_function=allophanate hydrolase activity|0004039||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498064.1;locus_tag=LDO45_RS11080;product=allophanate hydrolase;protein_id=WP_223961610.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 77900 78874 . + . ID=gene-LDO45_RS11085;Name=LDO45_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11085;old_locus_tag=BDI4_20073 NZ_CAJZAS010000112.1 Protein Homology CDS 77900 78874 . + 0 ID=cds-WP_059692415.1;Parent=gene-LDO45_RS11085;Dbxref=GenBank:WP_059692415.1;Name=WP_059692415.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485545.1;locus_tag=LDO45_RS11085;product=ABC transporter permease;protein_id=WP_059692415.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 78920 79828 . + . ID=gene-LDO45_RS11090;Name=LDO45_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11090;old_locus_tag=BDI4_20074 NZ_CAJZAS010000112.1 Protein Homology CDS 78920 79828 . + 0 ID=cds-WP_223961612.1;Parent=gene-LDO45_RS11090;Dbxref=GenBank:WP_223961612.1;Name=WP_223961612.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549110.1;locus_tag=LDO45_RS11090;product=ABC transporter ATP-binding protein;protein_id=WP_223961612.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 80435 80938 . + . ID=gene-LDO45_RS11095;Name=LDO45_RS11095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11095;old_locus_tag=BDI4_20076 NZ_CAJZAS010000112.1 Protein Homology CDS 80435 80938 . + 0 ID=cds-WP_059525772.1;Parent=gene-LDO45_RS11095;Dbxref=GenBank:WP_059525772.1;Name=WP_059525772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017336890.1;locus_tag=LDO45_RS11095;product=inclusion body family protein;protein_id=WP_059525772.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 81003 81521 . + . ID=gene-LDO45_RS11100;Name=LDO45_RS11100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11100;old_locus_tag=BDI4_20077 NZ_CAJZAS010000112.1 Protein Homology CDS 81003 81521 . + 0 ID=cds-WP_223961614.1;Parent=gene-LDO45_RS11100;Dbxref=GenBank:WP_223961614.1;Name=WP_223961614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336900.1;locus_tag=LDO45_RS11100;product=AidA/PixA family protein;protein_id=WP_223961614.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 81680 82381 . - . ID=gene-LDO45_RS11105;Name=LDO45_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11105;old_locus_tag=BDI4_20078 NZ_CAJZAS010000112.1 Protein Homology CDS 81680 82381 . - 0 ID=cds-WP_223961615.1;Parent=gene-LDO45_RS11105;Dbxref=GenBank:WP_223961615.1;Name=WP_223961615.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007870887.1;locus_tag=LDO45_RS11105;product=FadR/GntR family transcriptional regulator;protein_id=WP_223961615.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 82758 83774 . + . ID=gene-LDO45_RS11110;Name=LDO45_RS11110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11110;old_locus_tag=BDI4_20081 NZ_CAJZAS010000112.1 Protein Homology CDS 82758 83774 . + 0 ID=cds-WP_059692419.1;Parent=gene-LDO45_RS11110;Dbxref=GenBank:WP_059692419.1;Name=WP_059692419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008353221.1;locus_tag=LDO45_RS11110;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_059692419.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 83792 84904 . + . ID=gene-LDO45_RS11115;Name=LDO45_RS11115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11115;old_locus_tag=BDI4_20082 NZ_CAJZAS010000112.1 Protein Homology CDS 83792 84904 . + 0 ID=cds-WP_223961617.1;Parent=gene-LDO45_RS11115;Dbxref=GenBank:WP_223961617.1;Name=WP_223961617.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013093805.1;locus_tag=LDO45_RS11115;product=mannitol dehydrogenase family protein;protein_id=WP_223961617.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 84969 86276 . + . ID=gene-LDO45_RS11120;Name=LDO45_RS11120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11120;old_locus_tag=BDI4_20083 NZ_CAJZAS010000112.1 Protein Homology CDS 84969 86276 . + 0 ID=cds-WP_223961619.1;Parent=gene-LDO45_RS11120;Dbxref=GenBank:WP_223961619.1;Name=WP_223961619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013588968.1;locus_tag=LDO45_RS11120;product=enolase C-terminal domain-like protein;protein_id=WP_223961619.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 86317 87654 . + . ID=gene-LDO45_RS11125;Name=LDO45_RS11125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11125;old_locus_tag=BDI4_20084 NZ_CAJZAS010000112.1 Protein Homology CDS 86317 87654 . + 0 ID=cds-WP_223961621.1;Parent=gene-LDO45_RS11125;Dbxref=GenBank:WP_223961621.1;Name=WP_223961621.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020066253.1;locus_tag=LDO45_RS11125;product=MFS transporter;protein_id=WP_223961621.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 87726 89267 . + . ID=gene-LDO45_RS11130;Name=LDO45_RS11130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11130;old_locus_tag=BDI4_20085 NZ_CAJZAS010000112.1 Protein Homology CDS 87726 89267 . + 0 ID=cds-WP_223961622.1;Parent=gene-LDO45_RS11130;Dbxref=GenBank:WP_223961622.1;Name=WP_223961622.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007733432.1;locus_tag=LDO45_RS11130;product=UxaA family hydrolase;protein_id=WP_223961622.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 89563 90423 . + . ID=gene-LDO45_RS11135;Name=LDO45_RS11135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11135;old_locus_tag=BDI4_20086 NZ_CAJZAS010000112.1 Protein Homology CDS 89563 90423 . + 0 ID=cds-WP_059525785.1;Parent=gene-LDO45_RS11135;Dbxref=GenBank:WP_059525785.1;Name=WP_059525785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753459.1;locus_tag=LDO45_RS11135;product=transporter substrate-binding domain-containing protein;protein_id=WP_059525785.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 90516 91238 . + . ID=gene-LDO45_RS11140;Name=LDO45_RS11140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11140;old_locus_tag=BDI4_20087 NZ_CAJZAS010000112.1 Protein Homology CDS 90516 91238 . + 0 ID=cds-WP_223961623.1;Parent=gene-LDO45_RS11140;Dbxref=GenBank:WP_223961623.1;Name=WP_223961623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481063.1;locus_tag=LDO45_RS11140;product=ABC transporter permease;protein_id=WP_223961623.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 91251 91997 . + . ID=gene-LDO45_RS11145;Name=LDO45_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11145;old_locus_tag=BDI4_20088 NZ_CAJZAS010000112.1 Protein Homology CDS 91251 91997 . + 0 ID=cds-WP_223961624.1;Parent=gene-LDO45_RS11145;Dbxref=GenBank:WP_223961624.1;Name=WP_223961624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337093.1;locus_tag=LDO45_RS11145;product=ABC transporter permease;protein_id=WP_223961624.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 92025 92816 . + . ID=gene-LDO45_RS11150;Name=LDO45_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11150;old_locus_tag=BDI4_20089 NZ_CAJZAS010000112.1 Protein Homology CDS 92025 92816 . + 0 ID=cds-WP_059525791.1;Parent=gene-LDO45_RS11150;Dbxref=GenBank:WP_059525791.1;Name=WP_059525791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013592029.1;locus_tag=LDO45_RS11150;product=ABC transporter ATP-binding protein;protein_id=WP_059525791.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 92824 94317 . + . ID=gene-LDO45_RS11155;Name=hutH;gbkey=Gene;gene=hutH;gene_biotype=protein_coding;locus_tag=LDO45_RS11155;old_locus_tag=BDI4_20090 NZ_CAJZAS010000112.1 Protein Homology CDS 92824 94317 . + 0 ID=cds-WP_223961625.1;Parent=gene-LDO45_RS11155;Dbxref=GenBank:WP_223961625.1;Name=WP_223961625.1;Ontology_term=GO:0006548,GO:0004397;gbkey=CDS;gene=hutH;go_function=histidine ammonia-lyase activity|0004397||IEA;go_process=L-histidine catabolic process|0006548||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484825.1;locus_tag=LDO45_RS11155;product=histidine ammonia-lyase;protein_id=WP_223961625.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 94368 95123 . + . ID=gene-LDO45_RS11160;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=LDO45_RS11160;old_locus_tag=BDI4_20091 NZ_CAJZAS010000112.1 Protein Homology CDS 94368 95123 . + 0 ID=cds-WP_223961626.1;Parent=gene-LDO45_RS11160;Dbxref=GenBank:WP_223961626.1;Name=WP_223961626.1;Ontology_term=GO:0006355,GO:0006547,GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-histidine metabolic process|0006547||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549290.1;locus_tag=LDO45_RS11160;product=histidine utilization repressor;protein_id=WP_223961626.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 95786 97177 . + . ID=gene-LDO45_RS11165;Name=LDO45_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11165;old_locus_tag=BDI4_20093 NZ_CAJZAS010000112.1 Protein Homology CDS 95786 97177 . + 0 ID=cds-WP_253074742.1;Parent=gene-LDO45_RS11165;Dbxref=GenBank:WP_253074742.1;Name=WP_253074742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894782.1;locus_tag=LDO45_RS11165;product=glycosyltransferase;protein_id=WP_253074742.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 97174 98109 . + . ID=gene-LDO45_RS11170;Name=LDO45_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11170;old_locus_tag=BDI4_20094 NZ_CAJZAS010000112.1 Protein Homology CDS 97174 98109 . + 0 ID=cds-WP_223961627.1;Parent=gene-LDO45_RS11170;Dbxref=GenBank:WP_223961627.1;Name=WP_223961627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254541.1;locus_tag=LDO45_RS11170;product=tRNA-ribosyltransferase;protein_id=WP_223961627.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 98249 99169 . + . ID=gene-LDO45_RS11175;Name=LDO45_RS11175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11175;old_locus_tag=BDI4_20095 NZ_CAJZAS010000112.1 Protein Homology CDS 98249 99169 . + 0 ID=cds-WP_059525800.1;Parent=gene-LDO45_RS11175;Dbxref=GenBank:WP_059525800.1;Name=WP_059525800.1;Ontology_term=GO:0071973,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894793.1;locus_tag=LDO45_RS11175;product=flagellin;protein_id=WP_059525800.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 99287 100144 . + . ID=gene-LDO45_RS11180;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=LDO45_RS11180;old_locus_tag=BDI4_20096 NZ_CAJZAS010000112.1 Protein Homology CDS 99287 100144 . + 0 ID=cds-WP_223961628.1;Parent=gene-LDO45_RS11180;Dbxref=GenBank:WP_223961628.1;Name=WP_223961628.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005668603.1;locus_tag=LDO45_RS11180;product=flagellar motor stator protein MotA;protein_id=WP_223961628.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 100158 101066 . + . ID=gene-LDO45_RS11185;Name=LDO45_RS11185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11185;old_locus_tag=BDI4_20097 NZ_CAJZAS010000112.1 Protein Homology CDS 100158 101066 . + 0 ID=cds-WP_290371015.1;Parent=gene-LDO45_RS11185;Dbxref=GenBank:WP_290371015.1;Name=WP_290371015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011852495.1;locus_tag=LDO45_RS11185;product=flagellar motor protein MotB;protein_id=WP_290371015.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 101146 101499 . + . ID=gene-LDO45_RS11190;Name=LDO45_RS11190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11190;old_locus_tag=BDI4_20098 NZ_CAJZAS010000112.1 GeneMarkS-2+ CDS 101146 101499 . + 0 ID=cds-WP_223961630.1;Parent=gene-LDO45_RS11190;Dbxref=GenBank:WP_223961630.1;Name=WP_223961630.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS11190;product=hypothetical protein;protein_id=WP_223961630.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 101560 103068 . + . ID=gene-LDO45_RS11195;Name=LDO45_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11195;old_locus_tag=BDI4_20099 NZ_CAJZAS010000112.1 Protein Homology CDS 101560 103068 . + 0 ID=cds-WP_223961632.1;Parent=gene-LDO45_RS11195;Dbxref=GenBank:WP_223961632.1;Name=WP_223961632.1;Ontology_term=GO:0001907,GO:0090729;gbkey=CDS;go_function=toxin activity|0090729||IEA;go_process=symbiont-mediated killing of host cell|0001907||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011296566.1;locus_tag=LDO45_RS11195;product=insecticidal delta-endotoxin Cry8Ea1 family protein;protein_id=WP_223961632.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 103120 105210 . - . ID=gene-LDO45_RS11200;Name=LDO45_RS11200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11200;old_locus_tag=BDI4_20100 NZ_CAJZAS010000112.1 Protein Homology CDS 103120 105210 . - 0 ID=cds-WP_223961634.1;Parent=gene-LDO45_RS11200;Dbxref=GenBank:WP_223961634.1;Name=WP_223961634.1;Ontology_term=GO:0009306,GO:0044780,GO:0071978;gbkey=CDS;go_process=protein secretion|0009306||IEA,bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent swarming motility|0071978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011852500.1;locus_tag=LDO45_RS11200;product=flagellar biosynthesis protein FlhA;protein_id=WP_223961634.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 105207 106346 . - . ID=gene-LDO45_RS11205;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=LDO45_RS11205;old_locus_tag=BDI4_20101 NZ_CAJZAS010000112.1 Protein Homology CDS 105207 106346 . - 0 ID=cds-WP_223961636.1;Parent=gene-LDO45_RS11205;Dbxref=GenBank:WP_223961636.1;Name=WP_223961636.1;Ontology_term=GO:0009306,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523653.1;locus_tag=LDO45_RS11205;product=flagellar type III secretion system protein FlhB;protein_id=WP_223961636.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 106339 107115 . - . ID=gene-LDO45_RS11210;Name=LDO45_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11210;old_locus_tag=BDI4_20102 NZ_CAJZAS010000112.1 Protein Homology CDS 106339 107115 . - 0 ID=cds-WP_223961637.1;Parent=gene-LDO45_RS11210;Dbxref=GenBank:WP_223961637.1;Name=WP_223961637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009898398.1;locus_tag=LDO45_RS11210;product=flagellar biosynthetic protein FliR;protein_id=WP_223961637.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 107120 107392 . - . ID=gene-LDO45_RS11215;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=LDO45_RS11215;old_locus_tag=BDI4_20103 NZ_CAJZAS010000112.1 Protein Homology CDS 107120 107392 . - 0 ID=cds-WP_059525814.1;Parent=gene-LDO45_RS11215;Dbxref=GenBank:WP_059525814.1;Name=WP_059525814.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523651.1;locus_tag=LDO45_RS11215;product=flagellar biosynthesis protein FliQ;protein_id=WP_059525814.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 107392 108102 . - . ID=gene-LDO45_RS11220;Name=LDO45_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11220;old_locus_tag=BDI4_20104 NZ_CAJZAS010000112.1 Protein Homology CDS 107392 108102 . - 0 ID=cds-WP_374109528.1;Parent=gene-LDO45_RS11220;Dbxref=GenBank:WP_374109528.1;Name=WP_374109528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010111030.1;locus_tag=LDO45_RS11220;product=flagellar type III secretion system pore protein FliP;protein_id=WP_374109528.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 108156 108503 . - . ID=gene-LDO45_RS11225;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=LDO45_RS11225;old_locus_tag=BDI4_20105 NZ_CAJZAS010000112.1 Protein Homology CDS 108156 108503 . - 0 ID=cds-WP_059692431.1;Parent=gene-LDO45_RS11225;Dbxref=GenBank:WP_059692431.1;Name=WP_059692431.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523649.1;locus_tag=LDO45_RS11225;product=flagellar motor switch protein FliN;protein_id=WP_059692431.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 108507 109379 . - . ID=gene-LDO45_RS11230;Name=LDO45_RS11230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11230;old_locus_tag=BDI4_20106 NZ_CAJZAS010000112.1 Protein Homology CDS 108507 109379 . - 0 ID=cds-WP_223961641.1;Parent=gene-LDO45_RS11230;Dbxref=GenBank:WP_223961641.1;Name=WP_223961641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254531.1;locus_tag=LDO45_RS11230;product=FliM/FliN family flagellar motor switch protein;protein_id=WP_223961641.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 110114 110440 . + . ID=gene-LDO45_RS11235;Name=LDO45_RS11235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11235;old_locus_tag=BDI4_20107 NZ_CAJZAS010000112.1 Protein Homology CDS 110114 110440 . + 0 ID=cds-WP_059692433.1;Parent=gene-LDO45_RS11235;Dbxref=GenBank:WP_059692433.1;Name=WP_059692433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010122051.1;locus_tag=LDO45_RS11235;product=flagellar hook-basal body complex protein FliE;protein_id=WP_059692433.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 110540 112123 . + . ID=gene-LDO45_RS11240;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=LDO45_RS11240;old_locus_tag=BDI4_20108 NZ_CAJZAS010000112.1 Protein Homology CDS 110540 112123 . + 0 ID=cds-WP_374109529.1;Parent=gene-LDO45_RS11240;Dbxref=GenBank:WP_374109529.1;Name=WP_374109529.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538907.1;locus_tag=LDO45_RS11240;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_374109529.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 112104 113117 . + . ID=gene-LDO45_RS11245;Name=LDO45_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11245;old_locus_tag=BDI4_20109 NZ_CAJZAS010000112.1 Protein Homology CDS 112104 113117 . + 0 ID=cds-WP_223961644.1;Parent=gene-LDO45_RS11245;Dbxref=GenBank:WP_223961644.1;Name=WP_223961644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009928102.1;locus_tag=LDO45_RS11245;product=FliG C-terminal domain-containing protein;protein_id=WP_223961644.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 113114 113839 . + . ID=gene-LDO45_RS11250;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=LDO45_RS11250;old_locus_tag=BDI4_20110 NZ_CAJZAS010000112.1 Protein Homology CDS 113114 113839 . + 0 ID=cds-WP_223961646.1;Parent=gene-LDO45_RS11250;Dbxref=GenBank:WP_223961646.1;Name=WP_223961646.1;gbkey=CDS;gene=fliH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010122183.1;locus_tag=LDO45_RS11250;product=flagellar assembly protein FliH;protein_id=WP_223961646.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 113836 115140 . + . ID=gene-LDO45_RS11255;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=LDO45_RS11255;old_locus_tag=BDI4_20111 NZ_CAJZAS010000112.1 Protein Homology CDS 113836 115140 . + 0 ID=cds-WP_223961648.1;Parent=gene-LDO45_RS11255;Dbxref=GenBank:WP_223961648.1;Name=WP_223961648.1;Ontology_term=GO:0030254,GO:0005524,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014428169.1;locus_tag=LDO45_RS11255;product=flagellar protein export ATPase FliI;protein_id=WP_223961648.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 115137 115574 . + . ID=gene-LDO45_RS11260;Name=LDO45_RS11260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11260;old_locus_tag=BDI4_20112 NZ_CAJZAS010000112.1 Protein Homology CDS 115137 115574 . + 0 ID=cds-WP_059692437.1;Parent=gene-LDO45_RS11260;Dbxref=GenBank:WP_059692437.1;Name=WP_059692437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523642.1;locus_tag=LDO45_RS11260;product=FliJ family protein;protein_id=WP_059692437.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 115633 116970 . + . ID=gene-LDO45_RS11265;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=LDO45_RS11265;old_locus_tag=BDI4_20113 NZ_CAJZAS010000112.1 Protein Homology CDS 115633 116970 . + 0 ID=cds-WP_223961649.1;Parent=gene-LDO45_RS11265;Dbxref=GenBank:WP_223961649.1;Name=WP_223961649.1;Ontology_term=GO:0007155,GO:0009288;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254527.1;locus_tag=LDO45_RS11265;product=flagellar filament capping protein FliD;protein_id=WP_223961649.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 117013 117399 . + . ID=gene-LDO45_RS11270;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=LDO45_RS11270;old_locus_tag=BDI4_20114 NZ_CAJZAS010000112.1 Protein Homology CDS 117013 117399 . + 0 ID=cds-WP_059701076.1;Parent=gene-LDO45_RS11270;Dbxref=GenBank:WP_059701076.1;Name=WP_059701076.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009518114.1;locus_tag=LDO45_RS11270;product=flagellar export chaperone FliS;protein_id=WP_059701076.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 117386 117721 . + . ID=gene-LDO45_RS11275;Name=LDO45_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11275;old_locus_tag=BDI4_20115 NZ_CAJZAS010000112.1 GeneMarkS-2+ CDS 117386 117721 . + 0 ID=cds-WP_223961651.1;Parent=gene-LDO45_RS11275;Dbxref=GenBank:WP_223961651.1;Name=WP_223961651.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS11275;product=hypothetical protein;protein_id=WP_223961651.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 117718 118809 . + . ID=gene-LDO45_RS11280;Name=LDO45_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11280;old_locus_tag=BDI4_20116 NZ_CAJZAS010000112.1 Protein Homology CDS 117718 118809 . + 0 ID=cds-WP_223961653.1;Parent=gene-LDO45_RS11280;Dbxref=GenBank:WP_223961653.1;Name=WP_223961653.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014207.5;locus_tag=LDO45_RS11280;product=flagellar hook-length control protein FliK;protein_id=WP_223961653.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 118846 119307 . + . ID=gene-LDO45_RS11285;Name=LDO45_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11285;old_locus_tag=BDI4_20117 NZ_CAJZAS010000112.1 GeneMarkS-2+ CDS 118846 119307 . + 0 ID=cds-WP_059525840.1;Parent=gene-LDO45_RS11285;Dbxref=GenBank:WP_059525840.1;Name=WP_059525840.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS11285;product=hypothetical protein;protein_id=WP_059525840.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 119313 120023 . + . ID=gene-LDO45_RS11290;Name=fliA;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=LDO45_RS11290;old_locus_tag=BDI4_20118 NZ_CAJZAS010000112.1 Protein Homology CDS 119313 120023 . + 0 ID=cds-WP_223961655.1;Parent=gene-LDO45_RS11290;Dbxref=GenBank:WP_223961655.1;Name=WP_223961655.1;gbkey=CDS;gene=fliA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020415482.1;locus_tag=LDO45_RS11290;product=RNA polymerase sigma factor FliA;protein_id=WP_223961655.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 120088 120357 . + . ID=gene-LDO45_RS11295;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=LDO45_RS11295;old_locus_tag=BDI4_20120 NZ_CAJZAS010000112.1 Protein Homology CDS 120088 120357 . + 0 ID=cds-WP_223961657.1;Parent=gene-LDO45_RS11295;Dbxref=GenBank:WP_223961657.1;Name=WP_223961657.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005668601.1;locus_tag=LDO45_RS11295;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_223961657.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 120354 120779 . + . ID=gene-LDO45_RS11300;Name=flgN;gbkey=Gene;gene=flgN;gene_biotype=protein_coding;locus_tag=LDO45_RS11300;old_locus_tag=BDI4_20119 NZ_CAJZAS010000112.1 Protein Homology CDS 120354 120779 . + 0 ID=cds-WP_223961659.1;Parent=gene-LDO45_RS11300;Dbxref=GenBank:WP_223961659.1;Name=WP_223961659.1;Ontology_term=GO:0044780,GO:0005515;gbkey=CDS;gene=flgN;go_function=protein binding|0005515||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009974840.1;locus_tag=LDO45_RS11300;product=flagellar export chaperone FlgN;protein_id=WP_223961659.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 120766 121563 . + . ID=gene-LDO45_RS11305;Name=LDO45_RS11305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11305;old_locus_tag=BDI4_20121 NZ_CAJZAS010000112.1 Protein Homology CDS 120766 121563 . + 0 ID=cds-WP_223961661.1;Parent=gene-LDO45_RS11305;Dbxref=GenBank:WP_223961661.1;Name=WP_223961661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523633.1;locus_tag=LDO45_RS11305;product=glycoside hydrolase family 73 protein;protein_id=WP_223961661.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 121505 122230 . - . ID=gene-LDO45_RS11310;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=LDO45_RS11310;old_locus_tag=BDI4_20122 NZ_CAJZAS010000112.1 Protein Homology CDS 121505 122230 . - 0 ID=cds-WP_223961663.1;Parent=gene-LDO45_RS11310;Dbxref=GenBank:WP_223961663.1;Name=WP_223961663.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004541547.1;locus_tag=LDO45_RS11310;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_223961663.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 122323 122688 . + . ID=gene-LDO45_RS11315;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=LDO45_RS11315;old_locus_tag=BDI4_20123 NZ_CAJZAS010000112.1 Protein Homology CDS 122323 122688 . + 0 ID=cds-WP_223961665.1;Parent=gene-LDO45_RS11315;Dbxref=GenBank:WP_223961665.1;Name=WP_223961665.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014428183.1;locus_tag=LDO45_RS11315;product=flagellar basal body rod protein FlgB;protein_id=WP_223961665.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 122726 123142 . + . ID=gene-LDO45_RS11320;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=LDO45_RS11320;old_locus_tag=BDI4_20124 NZ_CAJZAS010000112.1 Protein Homology CDS 122726 123142 . + 0 ID=cds-WP_223961667.1;Parent=gene-LDO45_RS11320;Dbxref=GenBank:WP_223961667.1;Name=WP_223961667.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009898437.1;locus_tag=LDO45_RS11320;product=flagellar basal body rod protein FlgC;protein_id=WP_223961667.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq pseudogene 123202 123327 . + . ID=gene-LDO45_RS34130;Name=LDO45_RS34130;end_range=123327,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34130;partial=true;pseudo=true NZ_CAJZAS010000112.1 Protein Homology CDS 123202 123327 . + 0 ID=cds-LDO45_RS34130;Parent=gene-LDO45_RS34130;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=123327,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015896.5;locus_tag=LDO45_RS34130;partial=true;product=flagellar hook capping FlgD N-terminal domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 123388 123828 . + . ID=gene-LDO45_RS11330;Name=LDO45_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11330;old_locus_tag=BDI4_20125 NZ_CAJZAS010000112.1 Protein Homology CDS 123388 123828 . + 0 ID=cds-WP_223961698.1;Parent=gene-LDO45_RS11330;Dbxref=GenBank:WP_223961698.1;Name=WP_223961698.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025229.5;locus_tag=LDO45_RS11330;product=FlgD immunoglobulin-like domain containing protein;protein_id=WP_223961698.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 123858 125033 . + . ID=gene-LDO45_RS11335;Name=LDO45_RS11335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11335;old_locus_tag=BDI4_20126 NZ_CAJZAS010000112.1 Protein Homology CDS 123858 125033 . + 0 ID=cds-WP_223961669.1;Parent=gene-LDO45_RS11335;Dbxref=GenBank:WP_223961669.1;Name=WP_223961669.1;Ontology_term=GO:0071973;gbkey=CDS;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894858.1;locus_tag=LDO45_RS11335;product=flagellar hook protein FlgE;protein_id=WP_223961669.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 125036 125761 . + . ID=gene-LDO45_RS11340;Name=LDO45_RS11340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11340;old_locus_tag=BDI4_20127 NZ_CAJZAS010000112.1 Protein Homology CDS 125036 125761 . + 0 ID=cds-WP_223961671.1;Parent=gene-LDO45_RS11340;Dbxref=GenBank:WP_223961671.1;Name=WP_223961671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894859.1;locus_tag=LDO45_RS11340;product=flagellar basal body rod protein FlgF;protein_id=WP_223961671.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 125797 126585 . + . ID=gene-LDO45_RS11345;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=LDO45_RS11345;old_locus_tag=BDI4_20128 NZ_CAJZAS010000112.1 Protein Homology CDS 125797 126585 . + 0 ID=cds-WP_179949248.1;Parent=gene-LDO45_RS11345;Dbxref=GenBank:WP_179949248.1;Name=WP_179949248.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254517.1;locus_tag=LDO45_RS11345;product=flagellar basal-body rod protein FlgG;protein_id=WP_179949248.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 126582 127238 . + . ID=gene-LDO45_RS11350;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=LDO45_RS11350;old_locus_tag=BDI4_20129 NZ_CAJZAS010000112.1 Protein Homology CDS 126582 127238 . + 0 ID=cds-WP_223961673.1;Parent=gene-LDO45_RS11350;Dbxref=GenBank:WP_223961673.1;Name=WP_223961673.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254516.1;locus_tag=LDO45_RS11350;product=flagellar basal body L-ring protein FlgH;protein_id=WP_223961673.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 127289 128389 . + . ID=gene-LDO45_RS11355;Name=LDO45_RS11355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11355;old_locus_tag=BDI4_20130 NZ_CAJZAS010000112.1 Protein Homology CDS 127289 128389 . + 0 ID=cds-WP_223961700.1;Parent=gene-LDO45_RS11355;Dbxref=GenBank:WP_223961700.1;Name=WP_223961700.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766975.1;locus_tag=LDO45_RS11355;product=flagellar basal body P-ring protein FlgI;protein_id=WP_223961700.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 128403 128759 . + . ID=gene-LDO45_RS11360;Name=LDO45_RS11360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11360;old_locus_tag=BDI4_20131 NZ_CAJZAS010000112.1 Protein Homology CDS 128403 128759 . + 0 ID=cds-WP_223961675.1;Parent=gene-LDO45_RS11360;Dbxref=GenBank:WP_223961675.1;Name=WP_223961675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004557662.1;locus_tag=LDO45_RS11360;product=peptidoglycan hydrolase;protein_id=WP_223961675.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 128894 130252 . + . ID=gene-LDO45_RS11365;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=LDO45_RS11365;old_locus_tag=BDI4_20132 NZ_CAJZAS010000112.1 Protein Homology CDS 128894 130252 . + 0 ID=cds-WP_223961677.1;Parent=gene-LDO45_RS11365;Dbxref=GenBank:WP_223961677.1;Name=WP_223961677.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009974847.1;locus_tag=LDO45_RS11365;product=flagellar hook-associated protein FlgK;protein_id=WP_223961677.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 130269 131180 . + . ID=gene-LDO45_RS11370;Name=LDO45_RS11370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11370;old_locus_tag=BDI4_20133 NZ_CAJZAS010000112.1 Protein Homology CDS 130269 131180 . + 0 ID=cds-WP_223961679.1;Parent=gene-LDO45_RS11370;Dbxref=GenBank:WP_223961679.1;Name=WP_223961679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004541438.1;locus_tag=LDO45_RS11370;product=flagellar biosynthesis protein FlgL;protein_id=WP_223961679.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 131196 132254 . + . ID=gene-LDO45_RS11375;Name=LDO45_RS11375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11375;old_locus_tag=BDI4_20134 NZ_CAJZAS010000112.1 GeneMarkS-2+ CDS 131196 132254 . + 0 ID=cds-WP_223961681.1;Parent=gene-LDO45_RS11375;Dbxref=GenBank:WP_223961681.1;Name=WP_223961681.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS11375;product=hypothetical protein;protein_id=WP_223961681.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 132483 133247 . - . ID=gene-LDO45_RS11380;Name=LDO45_RS11380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11380;old_locus_tag=BDI4_20135 NZ_CAJZAS010000112.1 Protein Homology CDS 132483 133247 . - 0 ID=cds-WP_059692454.1;Parent=gene-LDO45_RS11380;Dbxref=GenBank:WP_059692454.1;Name=WP_059692454.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009898454.1;locus_tag=LDO45_RS11380;product=hypothetical protein;protein_id=WP_059692454.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 133896 134615 . + . ID=gene-LDO45_RS11385;Name=LDO45_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11385;old_locus_tag=BDI4_20138 NZ_CAJZAS010000112.1 Protein Homology CDS 133896 134615 . + 0 ID=cds-WP_059525868.1;Parent=gene-LDO45_RS11385;Dbxref=GenBank:WP_059525868.1;Name=WP_059525868.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725594.1;locus_tag=LDO45_RS11385;product=response regulator transcription factor;protein_id=WP_059525868.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 134615 136120 . + . ID=gene-LDO45_RS11390;Name=LDO45_RS11390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11390;old_locus_tag=BDI4_20137 NZ_CAJZAS010000112.1 Protein Homology CDS 134615 136120 . + 0 ID=cds-WP_223961682.1;Parent=gene-LDO45_RS11390;Dbxref=GenBank:WP_223961682.1;Name=WP_223961682.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349500.1;locus_tag=LDO45_RS11390;product=HAMP domain-containing sensor histidine kinase;protein_id=WP_223961682.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 136789 137049 . - . ID=gene-LDO45_RS11395;Name=LDO45_RS11395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11395;old_locus_tag=BDI4_20139 NZ_CAJZAS010000112.1 Protein Homology CDS 136789 137049 . - 0 ID=cds-WP_179949194.1;Parent=gene-LDO45_RS11395;Dbxref=GenBank:WP_179949194.1;Name=WP_179949194.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021356.5;locus_tag=LDO45_RS11395;product=CRISPR-associated endonuclease Cas2;protein_id=WP_179949194.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 137670 138770 . - . ID=gene-LDO45_RS11400;Name=LDO45_RS11400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11400;old_locus_tag=BDI4_20141 NZ_CAJZAS010000112.1 Protein Homology CDS 137670 138770 . - 0 ID=cds-WP_223961684.1;Parent=gene-LDO45_RS11400;Dbxref=GenBank:WP_223961684.1;Name=WP_223961684.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545752.1;locus_tag=LDO45_RS11400;product=AraC family transcriptional regulator;protein_id=WP_223961684.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 139091 140725 . + . ID=gene-LDO45_RS11405;Name=LDO45_RS11405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11405;old_locus_tag=BDI4_20142 NZ_CAJZAS010000112.1 Protein Homology CDS 139091 140725 . + 0 ID=cds-WP_223961686.1;Parent=gene-LDO45_RS11405;Dbxref=GenBank:WP_223961686.1;Name=WP_223961686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545750.1;locus_tag=LDO45_RS11405;product=AMP-binding protein;protein_id=WP_223961686.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 140725 141903 . + . ID=gene-LDO45_RS11410;Name=LDO45_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11410;old_locus_tag=BDI4_20143 NZ_CAJZAS010000112.1 Protein Homology CDS 140725 141903 . + 0 ID=cds-WP_223961687.1;Parent=gene-LDO45_RS11410;Dbxref=GenBank:WP_223961687.1;Name=WP_223961687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753574.1;locus_tag=LDO45_RS11410;product=AraC family transcriptional regulator;protein_id=WP_223961687.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 142061 143293 . - . ID=gene-LDO45_RS11415;Name=LDO45_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11415;old_locus_tag=BDI4_20144 NZ_CAJZAS010000112.1 Protein Homology CDS 142061 143293 . - 0 ID=cds-WP_059692483.1;Parent=gene-LDO45_RS11415;Dbxref=GenBank:WP_059692483.1;Name=WP_059692483.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094017.1;locus_tag=LDO45_RS11415;product=MFS transporter;protein_id=WP_059692483.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 143430 144857 . - . ID=gene-LDO45_RS11420;Name=LDO45_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11420;old_locus_tag=BDI4_20145 NZ_CAJZAS010000112.1 Protein Homology CDS 143430 144857 . - 0 ID=cds-WP_223961688.1;Parent=gene-LDO45_RS11420;Dbxref=GenBank:WP_223961688.1;Name=WP_223961688.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899801.1;locus_tag=LDO45_RS11420;product=MFS transporter;protein_id=WP_223961688.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 145065 145508 . - . ID=gene-LDO45_RS11425;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=LDO45_RS11425;old_locus_tag=BDI4_20146 NZ_CAJZAS010000112.1 Protein Homology CDS 145065 145508 . - 0 ID=cds-WP_223961689.1;Parent=gene-LDO45_RS11425;Dbxref=GenBank:WP_223961689.1;Name=WP_223961689.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899800.1;locus_tag=LDO45_RS11425;product=type II 3-dehydroquinate dehydratase;protein_id=WP_223961689.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 145528 146361 . - . ID=gene-LDO45_RS11430;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=LDO45_RS11430;old_locus_tag=BDI4_20147 NZ_CAJZAS010000112.1 Protein Homology CDS 145528 146361 . - 0 ID=cds-WP_059525931.1;Parent=gene-LDO45_RS11430;Dbxref=GenBank:WP_059525931.1;Name=WP_059525931.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498140.1;locus_tag=LDO45_RS11430;product=shikimate dehydrogenase;protein_id=WP_059525931.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 146361 147581 . - . ID=gene-LDO45_RS11435;Name=LDO45_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11435;old_locus_tag=BDI4_20148 NZ_CAJZAS010000112.1 Protein Homology CDS 146361 147581 . - 0 ID=cds-WP_059692468.1;Parent=gene-LDO45_RS11435;Dbxref=GenBank:WP_059692468.1;Name=WP_059692468.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335041.1;locus_tag=LDO45_RS11435;product=CaiB/BaiF CoA-transferase family protein;protein_id=WP_059692468.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 147581 148039 . - . ID=gene-LDO45_RS11440;Name=LDO45_RS11440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11440;old_locus_tag=BDI4_20149 NZ_CAJZAS010000112.1 Protein Homology CDS 147581 148039 . - 0 ID=cds-WP_059692469.1;Parent=gene-LDO45_RS11440;Dbxref=GenBank:WP_059692469.1;Name=WP_059692469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549085.1;locus_tag=LDO45_RS11440;product=MaoC family dehydratase;protein_id=WP_059692469.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 148042 148434 . - . ID=gene-LDO45_RS11445;Name=LDO45_RS11445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11445;old_locus_tag=BDI4_20150 NZ_CAJZAS010000112.1 Protein Homology CDS 148042 148434 . - 0 ID=cds-WP_044848449.1;Parent=gene-LDO45_RS11445;Dbxref=GenBank:WP_044848449.1;Name=WP_044848449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020066714.1;locus_tag=LDO45_RS11445;product=VOC family protein;protein_id=WP_044848449.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 148431 149381 . - . ID=gene-LDO45_RS11450;Name=LDO45_RS11450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11450;old_locus_tag=BDI4_20151 NZ_CAJZAS010000112.1 Protein Homology CDS 148431 149381 . - 0 ID=cds-WP_223961690.1;Parent=gene-LDO45_RS11450;Dbxref=GenBank:WP_223961690.1;Name=WP_223961690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094003.1;locus_tag=LDO45_RS11450;product=ketopantoate reductase family protein;protein_id=WP_223961690.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 149463 150383 . + . ID=gene-LDO45_RS11455;Name=LDO45_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11455;old_locus_tag=BDI4_20152 NZ_CAJZAS010000112.1 Protein Homology CDS 149463 150383 . + 0 ID=cds-WP_044848491.1;Parent=gene-LDO45_RS11455;Dbxref=GenBank:WP_044848491.1;Name=WP_044848491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336915.1;locus_tag=LDO45_RS11455;product=LysR family transcriptional regulator;protein_id=WP_044848491.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 150600 152015 . - . ID=gene-LDO45_RS11460;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=LDO45_RS11460;old_locus_tag=BDI4_20153 NZ_CAJZAS010000112.1 Protein Homology CDS 150600 152015 . - 0 ID=cds-WP_059525900.1;Parent=gene-LDO45_RS11460;Dbxref=GenBank:WP_059525900.1;Name=WP_059525900.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725601.1;locus_tag=LDO45_RS11460;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_059525900.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 152029 153630 . - . ID=gene-LDO45_RS11465;Name=LDO45_RS11465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11465;old_locus_tag=BDI4_20154 NZ_CAJZAS010000112.1 Protein Homology CDS 152029 153630 . - 0 ID=cds-WP_223961691.1;Parent=gene-LDO45_RS11465;Dbxref=GenBank:WP_223961691.1;Name=WP_223961691.1;Ontology_term=GO:1902600;gbkey=CDS;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012371936.1;locus_tag=LDO45_RS11465;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_223961691.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 154052 154450 . + . ID=gene-LDO45_RS11470;Name=LDO45_RS11470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11470 NZ_CAJZAS010000112.1 GeneMarkS-2+ CDS 154052 154450 . + 0 ID=cds-WP_223961692.1;Parent=gene-LDO45_RS11470;Dbxref=GenBank:WP_223961692.1;Name=WP_223961692.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS11470;product=hypothetical protein;protein_id=WP_223961692.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 154440 156230 . + . ID=gene-LDO45_RS11475;Name=LDO45_RS11475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11475;old_locus_tag=BDI4_20157 NZ_CAJZAS010000112.1 Protein Homology CDS 154440 156230 . + 0 ID=cds-WP_059525906.1;Parent=gene-LDO45_RS11475;Dbxref=GenBank:WP_059525906.1;Name=WP_059525906.1;Ontology_term=GO:0006631,GO:0003995,GO:0050660;gbkey=CDS;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904408.1;locus_tag=LDO45_RS11475;product=acyl-CoA dehydrogenase;protein_id=WP_059525906.1;transl_table=11 NZ_CAJZAS010000112.1 RefSeq gene 156310 157180 . + . ID=gene-LDO45_RS11480;Name=LDO45_RS11480;end_range=157180,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11480;partial=true NZ_CAJZAS010000112.1 Protein Homology CDS 156310 157180 . + 0 ID=cds-WP_374109530.1;Parent=gene-LDO45_RS11480;Dbxref=GenBank:WP_374109530.1;Name=WP_374109530.1;Ontology_term=GO:0016491;end_range=157180,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017773500.1;locus_tag=LDO45_RS11480;partial=true;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_374109530.1;transl_table=11 ##sequence-region NZ_CAJZAS010000113.1 1 83178 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000113.1 RefSeq region 1 83178 . + . ID=NZ_CAJZAS010000113.1:1..83178;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_20 NZ_CAJZAS010000113.1 RefSeq gene 1 549 . - . ID=gene-LDO45_RS11485;Name=LDO45_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11485;partial=true;start_range=.,1 NZ_CAJZAS010000113.1 Protein Homology CDS 1 549 . - 0 ID=cds-WP_223961703.1;Parent=gene-LDO45_RS11485;Dbxref=GenBank:WP_223961703.1;Name=WP_223961703.1;Ontology_term=GO:0000166,GO:0046872,GO:0052856,GO:0052857;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,metal ion binding|0046872||IEA,NADHX epimerase activity|0052856||IEA,NADPHX epimerase activity|0052857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492676.1;locus_tag=LDO45_RS11485;partial=true;product=NAD(P)H-hydrate epimerase;protein_id=WP_223961703.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 601 1902 . - . ID=gene-LDO45_RS11490;Name=LDO45_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11490;old_locus_tag=BDI4_200002 NZ_CAJZAS010000113.1 Protein Homology CDS 601 1902 . - 0 ID=cds-WP_223961705.1;Parent=gene-LDO45_RS11490;Dbxref=GenBank:WP_223961705.1;Name=WP_223961705.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527209.1;locus_tag=LDO45_RS11490;product=FAD-dependent oxidoreductase;protein_id=WP_223961705.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 2233 6297 . + . ID=gene-LDO45_RS11495;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=LDO45_RS11495;old_locus_tag=BDI4_200003 NZ_CAJZAS010000113.1 Protein Homology CDS 2233 6297 . + 0 ID=cds-WP_223961707.1;Parent=gene-LDO45_RS11495;Dbxref=GenBank:WP_223961707.1;Name=WP_223961707.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213195.1;locus_tag=LDO45_RS11495;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_223961707.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 6297 6839 . + . ID=gene-LDO45_RS11500;Name=LDO45_RS11500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11500;old_locus_tag=BDI4_200004 NZ_CAJZAS010000113.1 Protein Homology CDS 6297 6839 . + 0 ID=cds-WP_223961709.1;Parent=gene-LDO45_RS11500;Dbxref=GenBank:WP_223961709.1;Name=WP_223961709.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761178.1;locus_tag=LDO45_RS11500;product=GNAT family N-acetyltransferase;protein_id=WP_223961709.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 7005 7787 . - . ID=gene-LDO45_RS11505;Name=LDO45_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11505;old_locus_tag=BDI4_200005 NZ_CAJZAS010000113.1 Protein Homology CDS 7005 7787 . - 0 ID=cds-WP_059529712.1;Parent=gene-LDO45_RS11505;Dbxref=GenBank:WP_059529712.1;Name=WP_059529712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601097.1;locus_tag=LDO45_RS11505;product=peptidylprolyl isomerase;protein_id=WP_059529712.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 7806 8114 . - . ID=gene-LDO45_RS11510;Name=LDO45_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11510;old_locus_tag=BDI4_200006 NZ_CAJZAS010000113.1 Protein Homology CDS 7806 8114 . - 0 ID=cds-WP_059529714.1;Parent=gene-LDO45_RS11510;Dbxref=GenBank:WP_059529714.1;Name=WP_059529714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657151.1;locus_tag=LDO45_RS11510;product=BolA family transcriptional regulator;protein_id=WP_059529714.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 8116 8646 . - . ID=gene-LDO45_RS11515;Name=LDO45_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11515;old_locus_tag=BDI4_200007 NZ_CAJZAS010000113.1 Protein Homology CDS 8116 8646 . - 0 ID=cds-WP_011352350.1;Parent=gene-LDO45_RS11515;Dbxref=GenBank:WP_011352350.1;Name=WP_011352350.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904993.1;locus_tag=LDO45_RS11515;product=septation protein A;protein_id=WP_011352350.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 8771 9202 . - . ID=gene-LDO45_RS11520;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=LDO45_RS11520;old_locus_tag=BDI4_200008 NZ_CAJZAS010000113.1 Protein Homology CDS 8771 9202 . - 0 ID=cds-WP_059529717.1;Parent=gene-LDO45_RS11520;Dbxref=GenBank:WP_059529717.1;Name=WP_059529717.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761174.1;locus_tag=LDO45_RS11520;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_059529717.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 9241 10809 . - . ID=gene-LDO45_RS11525;Name=LDO45_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11525;old_locus_tag=BDI4_200009 NZ_CAJZAS010000113.1 Protein Homology CDS 9241 10809 . - 0 ID=cds-WP_223961711.1;Parent=gene-LDO45_RS11525;Dbxref=GenBank:WP_223961711.1;Name=WP_223961711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657149.1;locus_tag=LDO45_RS11525;product=YdiU family protein;protein_id=WP_223961711.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 10973 12616 . + . ID=gene-LDO45_RS11530;Name=LDO45_RS11530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11530;old_locus_tag=BDI4_200010 NZ_CAJZAS010000113.1 Protein Homology CDS 10973 12616 . + 0 ID=cds-WP_223961713.1;Parent=gene-LDO45_RS11530;Dbxref=GenBank:WP_223961713.1;Name=WP_223961713.1;Ontology_term=GO:0016874;gbkey=CDS;go_function=ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213198.1;locus_tag=LDO45_RS11530;product=3-(methylthio)propionyl-CoA ligase;protein_id=WP_223961713.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 12799 14883 . + . ID=gene-LDO45_RS11535;Name=LDO45_RS11535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11535;old_locus_tag=BDI4_200011 NZ_CAJZAS010000113.1 Protein Homology CDS 12799 14883 . + 0 ID=cds-WP_223961715.1;Parent=gene-LDO45_RS11535;Dbxref=GenBank:WP_223961715.1;Name=WP_223961715.1;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483901.1;locus_tag=LDO45_RS11535;product=3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein;protein_id=WP_223961715.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 14927 15559 . + . ID=gene-LDO45_RS11540;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=LDO45_RS11540;old_locus_tag=BDI4_200012 NZ_CAJZAS010000113.1 Protein Homology CDS 14927 15559 . + 0 ID=cds-WP_059698553.1;Parent=gene-LDO45_RS11540;Dbxref=GenBank:WP_059698553.1;Name=WP_059698553.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328688.1;locus_tag=LDO45_RS11540;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_059698553.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 15605 16783 . + . ID=gene-LDO45_RS11545;Name=LDO45_RS11545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11545;old_locus_tag=BDI4_200013 NZ_CAJZAS010000113.1 Protein Homology CDS 15605 16783 . + 0 ID=cds-WP_223961717.1;Parent=gene-LDO45_RS11545;Dbxref=GenBank:WP_223961717.1;Name=WP_223961717.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890652.1;locus_tag=LDO45_RS11545;product=acetyl-CoA C-acyltransferase;protein_id=WP_223961717.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 17082 18482 . + . ID=gene-LDO45_RS11550;Name=LDO45_RS11550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11550;old_locus_tag=BDI4_200014 NZ_CAJZAS010000113.1 Protein Homology CDS 17082 18482 . + 0 ID=cds-WP_223961719.1;Parent=gene-LDO45_RS11550;Dbxref=GenBank:WP_223961719.1;Name=WP_223961719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364061.1;locus_tag=LDO45_RS11550;product=sensor domain-containing diguanylate cyclase;protein_id=WP_223961719.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 18628 20769 . - . ID=gene-LDO45_RS11555;Name=LDO45_RS11555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11555;old_locus_tag=BDI4_200015 NZ_CAJZAS010000113.1 Protein Homology CDS 18628 20769 . - 0 ID=cds-WP_223961755.1;Parent=gene-LDO45_RS11555;Dbxref=GenBank:WP_223961755.1;Name=WP_223961755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402262.1;locus_tag=LDO45_RS11555;product=hypothetical protein;protein_id=WP_223961755.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 21652 21966 . + . ID=gene-LDO45_RS11560;Name=LDO45_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11560;old_locus_tag=BDI4_200016 NZ_CAJZAS010000113.1 Protein Homology CDS 21652 21966 . + 0 ID=cds-WP_059529737.1;Parent=gene-LDO45_RS11560;Dbxref=GenBank:WP_059529737.1;Name=WP_059529737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192097.1;locus_tag=LDO45_RS11560;product=Dabb family protein;protein_id=WP_059529737.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 21963 22442 . + . ID=gene-LDO45_RS11565;Name=LDO45_RS11565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11565;old_locus_tag=BDI4_200017 NZ_CAJZAS010000113.1 Protein Homology CDS 21963 22442 . + 0 ID=cds-WP_011885047.1;Parent=gene-LDO45_RS11565;Dbxref=GenBank:WP_011885047.1;Name=WP_011885047.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193935.1;locus_tag=LDO45_RS11565;product=PaaI family thioesterase;protein_id=WP_011885047.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 22551 23549 . + . ID=gene-LDO45_RS11570;Name=LDO45_RS11570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11570;old_locus_tag=BDI4_200018 NZ_CAJZAS010000113.1 Protein Homology CDS 22551 23549 . + 0 ID=cds-WP_059698547.1;Parent=gene-LDO45_RS11570;Dbxref=GenBank:WP_059698547.1;Name=WP_059698547.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760034.1;locus_tag=LDO45_RS11570;product=NADP-dependent oxidoreductase;protein_id=WP_059698547.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 23611 24570 . + . ID=gene-LDO45_RS11575;Name=LDO45_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11575;old_locus_tag=BDI4_200019 NZ_CAJZAS010000113.1 Protein Homology CDS 23611 24570 . + 0 ID=cds-WP_223961721.1;Parent=gene-LDO45_RS11575;Dbxref=GenBank:WP_223961721.1;Name=WP_223961721.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414493.1;locus_tag=LDO45_RS11575;product=alpha/beta hydrolase;protein_id=WP_223961721.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 24605 25045 . + . ID=gene-LDO45_RS11580;Name=LDO45_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11580;old_locus_tag=BDI4_200020 NZ_CAJZAS010000113.1 Protein Homology CDS 24605 25045 . + 0 ID=cds-WP_044843655.1;Parent=gene-LDO45_RS11580;Dbxref=GenBank:WP_044843655.1;Name=WP_044843655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411891.1;locus_tag=LDO45_RS11580;product=GNAT family N-acetyltransferase;protein_id=WP_044843655.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 25065 25910 . - . ID=gene-LDO45_RS11585;Name=LDO45_RS11585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11585;old_locus_tag=BDI4_200021 NZ_CAJZAS010000113.1 Protein Homology CDS 25065 25910 . - 0 ID=cds-WP_223961722.1;Parent=gene-LDO45_RS11585;Dbxref=GenBank:WP_223961722.1;Name=WP_223961722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896831.1;locus_tag=LDO45_RS11585;product=NRDE family protein;protein_id=WP_223961722.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 25987 27021 . - . ID=gene-LDO45_RS11590;Name=LDO45_RS11590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11590;old_locus_tag=BDI4_200022 NZ_CAJZAS010000113.1 Protein Homology CDS 25987 27021 . - 0 ID=cds-WP_223961724.1;Parent=gene-LDO45_RS11590;Dbxref=GenBank:WP_223961724.1;Name=WP_223961724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004535832.1;locus_tag=LDO45_RS11590;product=folate-binding protein YgfZ;protein_id=WP_223961724.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 27099 28118 . + . ID=gene-LDO45_RS11595;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=LDO45_RS11595;old_locus_tag=BDI4_200023 NZ_CAJZAS010000113.1 Protein Homology CDS 27099 28118 . + 0 ID=cds-WP_059529755.1;Parent=gene-LDO45_RS11595;Dbxref=GenBank:WP_059529755.1;Name=WP_059529755.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601776.1;locus_tag=LDO45_RS11595;product=endolytic transglycosylase MltG;protein_id=WP_059529755.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 28118 28738 . + . ID=gene-LDO45_RS11600;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=LDO45_RS11600;old_locus_tag=BDI4_200024 NZ_CAJZAS010000113.1 Protein Homology CDS 28118 28738 . + 0 ID=cds-WP_059529758.1;Parent=gene-LDO45_RS11600;Dbxref=GenBank:WP_059529758.1;Name=WP_059529758.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=thymidylate kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521281.1;locus_tag=LDO45_RS11600;product=dTMP kinase;protein_id=WP_059529758.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 28757 29785 . + . ID=gene-LDO45_RS11605;Name=LDO45_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11605;old_locus_tag=BDI4_200025 NZ_CAJZAS010000113.1 Protein Homology CDS 28757 29785 . + 0 ID=cds-WP_223961725.1;Parent=gene-LDO45_RS11605;Dbxref=GenBank:WP_223961725.1;Name=WP_223961725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352331.1;locus_tag=LDO45_RS11605;product=DNA polymerase III subunit delta';protein_id=WP_223961725.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 29865 30644 . + . ID=gene-LDO45_RS11610;Name=LDO45_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11610;old_locus_tag=BDI4_200026 NZ_CAJZAS010000113.1 Protein Homology CDS 29865 30644 . + 0 ID=cds-WP_059529764.1;Parent=gene-LDO45_RS11610;Dbxref=GenBank:WP_059529764.1;Name=WP_059529764.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657082.1;locus_tag=LDO45_RS11610;product=TatD family hydrolase;protein_id=WP_059529764.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 30688 31398 . + . ID=gene-LDO45_RS11615;Name=LDO45_RS11615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11615;old_locus_tag=BDI4_200027 NZ_CAJZAS010000113.1 Protein Homology CDS 30688 31398 . + 0 ID=cds-WP_059529767.1;Parent=gene-LDO45_RS11615;Dbxref=GenBank:WP_059529767.1;Name=WP_059529767.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885037.1;locus_tag=LDO45_RS11615;product=ankyrin repeat domain-containing protein;protein_id=WP_059529767.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 31519 31875 . + . ID=gene-LDO45_RS11620;Name=LDO45_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11620;old_locus_tag=BDI4_200028 NZ_CAJZAS010000113.1 Protein Homology CDS 31519 31875 . + 0 ID=cds-WP_006755340.1;Parent=gene-LDO45_RS11620;Dbxref=GenBank:WP_006755340.1;Name=WP_006755340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402276.1;locus_tag=LDO45_RS11620;product=Rap1a/Tai family immunity protein;protein_id=WP_006755340.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 31972 33144 . + . ID=gene-LDO45_RS11625;Name=LDO45_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11625;old_locus_tag=BDI4_200029 NZ_CAJZAS010000113.1 Protein Homology CDS 31972 33144 . + 0 ID=cds-WP_223961727.1;Parent=gene-LDO45_RS11625;Dbxref=GenBank:WP_223961727.1;Name=WP_223961727.1;Ontology_term=GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755342.1;locus_tag=LDO45_RS11625;product=mechanosensitive ion channel family protein;protein_id=WP_223961727.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 33178 34353 . + . ID=gene-LDO45_RS11630;Name=LDO45_RS11630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11630;old_locus_tag=BDI4_200030 NZ_CAJZAS010000113.1 Protein Homology CDS 33178 34353 . + 0 ID=cds-WP_223961729.1;Parent=gene-LDO45_RS11630;Dbxref=GenBank:WP_223961729.1;Name=WP_223961729.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026187.1;locus_tag=LDO45_RS11630;product=AAA family ATPase;protein_id=WP_223961729.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 34681 35745 . + . ID=gene-LDO45_RS11635;Name=LDO45_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11635;old_locus_tag=BDI4_200031 NZ_CAJZAS010000113.1 Protein Homology CDS 34681 35745 . + 0 ID=cds-WP_059529776.1;Parent=gene-LDO45_RS11635;Dbxref=GenBank:WP_059529776.1;Name=WP_059529776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004552799.1;locus_tag=LDO45_RS11635;product=glycosyltransferase family 4 protein;protein_id=WP_059529776.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 35845 36432 . - . ID=gene-LDO45_RS11640;Name=LDO45_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11640;old_locus_tag=BDI4_200032 NZ_CAJZAS010000113.1 Protein Homology CDS 35845 36432 . - 0 ID=cds-WP_059449922.1;Parent=gene-LDO45_RS11640;Dbxref=GenBank:WP_059449922.1;Name=WP_059449922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890687.1;locus_tag=LDO45_RS11640;product=YSC84-related protein;protein_id=WP_059449922.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 36658 37119 . - . ID=gene-LDO45_RS11645;Name=LDO45_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11645;old_locus_tag=BDI4_200033 NZ_CAJZAS010000113.1 Protein Homology CDS 36658 37119 . - 0 ID=cds-WP_059464355.1;Parent=gene-LDO45_RS11645;Dbxref=GenBank:WP_059464355.1;Name=WP_059464355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527193.1;locus_tag=LDO45_RS11645;product=hypothetical protein;protein_id=WP_059464355.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 37437 37727 . - . ID=gene-LDO45_RS11650;Name=LDO45_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11650;old_locus_tag=BDI4_200035 NZ_CAJZAS010000113.1 Protein Homology CDS 37437 37727 . - 0 ID=cds-WP_063549690.1;Parent=gene-LDO45_RS11650;Dbxref=GenBank:WP_063549690.1;Name=WP_063549690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602001.1;locus_tag=LDO45_RS11650;product=PsiF family protein;protein_id=WP_063549690.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 37999 39021 . + . ID=gene-LDO45_RS11655;Name=LDO45_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11655;old_locus_tag=BDI4_200034 NZ_CAJZAS010000113.1 Protein Homology CDS 37999 39021 . + 0 ID=cds-WP_059817606.1;Parent=gene-LDO45_RS11655;Dbxref=GenBank:WP_059817606.1;Name=WP_059817606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755059.1;locus_tag=LDO45_RS11655;product=asparaginase;protein_id=WP_059817606.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 39105 39575 . - . ID=gene-LDO45_RS11660;Name=lysM;gbkey=Gene;gene=lysM;gene_biotype=protein_coding;locus_tag=LDO45_RS11660;old_locus_tag=BDI4_200036 NZ_CAJZAS010000113.1 Protein Homology CDS 39105 39575 . - 0 ID=cds-WP_021162125.1;Parent=gene-LDO45_RS11660;Dbxref=GenBank:WP_021162125.1;Name=WP_021162125.1;gbkey=CDS;gene=lysM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890694.1;locus_tag=LDO45_RS11660;product=peptidoglycan-binding protein LysM;protein_id=WP_021162125.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 40032 40925 . - . ID=gene-LDO45_RS11665;Name=LDO45_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11665;old_locus_tag=BDI4_200040 NZ_CAJZAS010000113.1 Protein Homology CDS 40032 40925 . - 0 ID=cds-WP_059529785.1;Parent=gene-LDO45_RS11665;Dbxref=GenBank:WP_059529785.1;Name=WP_059529785.1;Ontology_term=GO:0019580,GO:0008679;gbkey=CDS;go_function=2-hydroxy-3-oxopropionate reductase activity|0008679||IEA;go_process=galactarate metabolic process|0019580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896847.1;locus_tag=LDO45_RS11665;product=2-hydroxy-3-oxopropionate reductase;protein_id=WP_059529785.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 40980 41789 . - . ID=gene-LDO45_RS11670;Name=hyi;gbkey=Gene;gene=hyi;gene_biotype=protein_coding;locus_tag=LDO45_RS11670;old_locus_tag=BDI4_200041 NZ_CAJZAS010000113.1 Protein Homology CDS 40980 41789 . - 0 ID=cds-WP_011657073.1;Parent=gene-LDO45_RS11670;Dbxref=GenBank:WP_011657073.1;Name=WP_011657073.1;gbkey=CDS;gene=hyi;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352319.1;locus_tag=LDO45_RS11670;product=hydroxypyruvate isomerase;protein_id=WP_011657073.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 41835 43610 . - . ID=gene-LDO45_RS11675;Name=gcl;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=LDO45_RS11675;old_locus_tag=BDI4_200042 NZ_CAJZAS010000113.1 Protein Homology CDS 41835 43610 . - 0 ID=cds-WP_059529790.1;Parent=gene-LDO45_RS11675;Dbxref=GenBank:WP_059529790.1;Name=WP_059529790.1;Ontology_term=GO:0009436,GO:0009028;gbkey=CDS;gene=gcl;go_function=tartronate-semialdehyde synthase activity|0009028||IEA;go_process=glyoxylate catabolic process|0009436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896848.1;locus_tag=LDO45_RS11675;product=glyoxylate carboligase;protein_id=WP_059529790.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 43783 44694 . + . ID=gene-LDO45_RS11680;Name=LDO45_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11680;old_locus_tag=BDI4_200043 NZ_CAJZAS010000113.1 Protein Homology CDS 43783 44694 . + 0 ID=cds-WP_059529794.1;Parent=gene-LDO45_RS11680;Dbxref=GenBank:WP_059529794.1;Name=WP_059529794.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896849.1;locus_tag=LDO45_RS11680;product=LysR family transcriptional regulator;protein_id=WP_059529794.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 44857 45504 . + . ID=gene-LDO45_RS11685;Name=LDO45_RS11685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11685;old_locus_tag=BDI4_200044 NZ_CAJZAS010000113.1 Protein Homology CDS 44857 45504 . + 0 ID=cds-WP_223961731.1;Parent=gene-LDO45_RS11685;Dbxref=GenBank:WP_223961731.1;Name=WP_223961731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017843817.1;locus_tag=LDO45_RS11685;product=RNA polymerase sigma factor;protein_id=WP_223961731.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 45494 46393 . + . ID=gene-LDO45_RS11690;Name=LDO45_RS11690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11690;old_locus_tag=BDI4_200045 NZ_CAJZAS010000113.1 Protein Homology CDS 45494 46393 . + 0 ID=cds-WP_223961733.1;Parent=gene-LDO45_RS11690;Dbxref=GenBank:WP_223961733.1;Name=WP_223961733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496378.1;locus_tag=LDO45_RS11690;product=zf-HC2 domain-containing protein;protein_id=WP_223961733.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 46637 47011 . + . ID=gene-LDO45_RS11695;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=LDO45_RS11695;old_locus_tag=BDI4_200046 NZ_CAJZAS010000113.1 Protein Homology CDS 46637 47011 . + 0 ID=cds-WP_006755436.1;Parent=gene-LDO45_RS11695;Dbxref=GenBank:WP_006755436.1;Name=WP_006755436.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010103105.1;locus_tag=LDO45_RS11695;product=30S ribosomal protein S6;protein_id=WP_006755436.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 47052 47351 . + . ID=gene-LDO45_RS11700;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=LDO45_RS11700;old_locus_tag=BDI4_200047 NZ_CAJZAS010000113.1 Protein Homology CDS 47052 47351 . + 0 ID=cds-WP_006486250.1;Parent=gene-LDO45_RS11700;Dbxref=GenBank:WP_006486250.1;Name=WP_006486250.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328667.1;locus_tag=LDO45_RS11700;product=primosomal replication protein N;protein_id=WP_006486250.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 47356 47631 . + . ID=gene-LDO45_RS11705;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=LDO45_RS11705;old_locus_tag=BDI4_200048 NZ_CAJZAS010000113.1 Protein Homology CDS 47356 47631 . + 0 ID=cds-WP_004193360.1;Parent=gene-LDO45_RS11705;Dbxref=GenBank:WP_004193360.1;Name=WP_004193360.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017776738.1;locus_tag=LDO45_RS11705;product=30S ribosomal protein S18;protein_id=WP_004193360.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 47659 48111 . + . ID=gene-LDO45_RS11710;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=LDO45_RS11710;old_locus_tag=BDI4_200049 NZ_CAJZAS010000113.1 Protein Homology CDS 47659 48111 . + 0 ID=cds-WP_047900882.1;Parent=gene-LDO45_RS11710;Dbxref=GenBank:WP_047900882.1;Name=WP_047900882.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402297.1;locus_tag=LDO45_RS11710;product=50S ribosomal protein L9;protein_id=WP_047900882.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 48247 49629 . + . ID=gene-LDO45_RS11715;Name=LDO45_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11715;old_locus_tag=BDI4_200050 NZ_CAJZAS010000113.1 Protein Homology CDS 48247 49629 . + 0 ID=cds-WP_044847233.1;Parent=gene-LDO45_RS11715;Dbxref=GenBank:WP_044847233.1;Name=WP_044847233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192724.1;locus_tag=LDO45_RS11715;product=replicative DNA helicase;protein_id=WP_044847233.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 49776 50402 . + . ID=gene-LDO45_RS11720;Name=LDO45_RS11720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11720;old_locus_tag=BDI4_200051 NZ_CAJZAS010000113.1 Protein Homology CDS 49776 50402 . + 0 ID=cds-WP_044847234.1;Parent=gene-LDO45_RS11720;Dbxref=GenBank:WP_044847234.1;Name=WP_044847234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698298.1;locus_tag=LDO45_RS11720;product=DUF47 domain-containing protein;protein_id=WP_044847234.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 50413 51423 . + . ID=gene-LDO45_RS11725;Name=LDO45_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11725;old_locus_tag=BDI4_200052 NZ_CAJZAS010000113.1 Protein Homology CDS 50413 51423 . + 0 ID=cds-WP_059449911.1;Parent=gene-LDO45_RS11725;Dbxref=GenBank:WP_059449911.1;Name=WP_059449911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193771.1;locus_tag=LDO45_RS11725;product=inorganic phosphate transporter;protein_id=WP_059449911.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 51548 52606 . - . ID=gene-LDO45_RS11730;Name=LDO45_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11730;old_locus_tag=BDI4_200053 NZ_CAJZAS010000113.1 Protein Homology CDS 51548 52606 . - 0 ID=cds-WP_223961735.1;Parent=gene-LDO45_RS11730;Dbxref=GenBank:WP_223961735.1;Name=WP_223961735.1;Ontology_term=GO:0006508,GO:0008233,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549650.1;locus_tag=LDO45_RS11730;product=C40 family peptidase;protein_id=WP_223961735.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 52844 54652 . - . ID=gene-LDO45_RS11735;Name=LDO45_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11735;old_locus_tag=BDI4_200054 NZ_CAJZAS010000113.1 Protein Homology CDS 52844 54652 . - 0 ID=cds-WP_059529806.1;Parent=gene-LDO45_RS11735;Dbxref=GenBank:WP_059529806.1;Name=WP_059529806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694301.1;locus_tag=LDO45_RS11735;product=PhoH family protein;protein_id=WP_059529806.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq pseudogene 54548 54792 . + . ID=gene-LDO45_RS34540;Name=LDO45_RS34540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34540;partial=true;pseudo=true;start_range=.,54548 NZ_CAJZAS010000113.1 Protein Homology CDS 54548 54792 . + 0 ID=cds-LDO45_RS34540;Parent=gene-LDO45_RS34540;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026209.1;locus_tag=LDO45_RS34540;partial=true;product=hypothetical protein;pseudo=true;start_range=.,54548;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 54985 55446 . - . ID=gene-LDO45_RS11740;Name=LDO45_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11740;old_locus_tag=BDI4_200055 NZ_CAJZAS010000113.1 Protein Homology CDS 54985 55446 . - 0 ID=cds-WP_006756046.1;Parent=gene-LDO45_RS11740;Dbxref=GenBank:WP_006756046.1;Name=WP_006756046.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549652.1;locus_tag=LDO45_RS11740;product=peroxiredoxin;protein_id=WP_006756046.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 55555 56451 . - . ID=gene-LDO45_RS11745;Name=LDO45_RS11745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11745;old_locus_tag=BDI4_200056 NZ_CAJZAS010000113.1 Protein Homology CDS 55555 56451 . - 0 ID=cds-WP_223961736.1;Parent=gene-LDO45_RS11745;Dbxref=GenBank:WP_223961736.1;Name=WP_223961736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890738.1;locus_tag=LDO45_RS11745;product=polysaccharide deacetylase family protein;protein_id=WP_223961736.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 56464 57519 . - . ID=gene-LDO45_RS11750;Name=LDO45_RS11750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11750;old_locus_tag=BDI4_200057 NZ_CAJZAS010000113.1 Protein Homology CDS 56464 57519 . - 0 ID=cds-WP_059529811.1;Parent=gene-LDO45_RS11750;Dbxref=GenBank:WP_059529811.1;Name=WP_059529811.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698287.1;locus_tag=LDO45_RS11750;product=bifunctional UDP-4-keto-pentose/UDP-xylose synthase;protein_id=WP_059529811.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 57516 58463 . - . ID=gene-LDO45_RS11755;Name=LDO45_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11755;old_locus_tag=BDI4_200058 NZ_CAJZAS010000113.1 Protein Homology CDS 57516 58463 . - 0 ID=cds-WP_059529815.1;Parent=gene-LDO45_RS11755;Dbxref=GenBank:WP_059529815.1;Name=WP_059529815.1;Ontology_term=GO:0016742;gbkey=CDS;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004539650.1;locus_tag=LDO45_RS11755;product=formyltransferase;protein_id=WP_059529815.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 58460 59482 . - . ID=gene-LDO45_RS11760;Name=LDO45_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11760;old_locus_tag=BDI4_200059 NZ_CAJZAS010000113.1 Protein Homology CDS 58460 59482 . - 0 ID=cds-WP_059529818.1;Parent=gene-LDO45_RS11760;Dbxref=GenBank:WP_059529818.1;Name=WP_059529818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496384.1;locus_tag=LDO45_RS11760;product=glycosyltransferase;protein_id=WP_059529818.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 59489 60640 . - . ID=gene-LDO45_RS11765;Name=LDO45_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11765;old_locus_tag=BDI4_200060 NZ_CAJZAS010000113.1 Protein Homology CDS 59489 60640 . - 0 ID=cds-WP_223961738.1;Parent=gene-LDO45_RS11765;Dbxref=GenBank:WP_223961738.1;Name=WP_223961738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192765.1;locus_tag=LDO45_RS11765;product=DegT/DnrJ/EryC1/StrS aminotransferase family protein;protein_id=WP_223961738.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 60777 61148 . - . ID=gene-LDO45_RS11770;Name=LDO45_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11770;old_locus_tag=BDI4_200061 NZ_CAJZAS010000113.1 Protein Homology CDS 60777 61148 . - 0 ID=cds-WP_014896865.1;Parent=gene-LDO45_RS11770;Dbxref=GenBank:WP_014896865.1;Name=WP_014896865.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482863.1;locus_tag=LDO45_RS11770;product=EamA family transporter;protein_id=WP_014896865.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 61162 62838 . - . ID=gene-LDO45_RS11775;Name=LDO45_RS11775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11775;old_locus_tag=BDI4_200062 NZ_CAJZAS010000113.1 Protein Homology CDS 61162 62838 . - 0 ID=cds-WP_223961740.1;Parent=gene-LDO45_RS11775;Dbxref=GenBank:WP_223961740.1;Name=WP_223961740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364027.1;locus_tag=LDO45_RS11775;product=glycosyltransferase family 39 protein;protein_id=WP_223961740.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 62985 63359 . - . ID=gene-LDO45_RS11780;Name=LDO45_RS11780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11780;old_locus_tag=BDI4_200064 NZ_CAJZAS010000113.1 Protein Homology CDS 62985 63359 . - 0 ID=cds-WP_059529828.1;Parent=gene-LDO45_RS11780;Dbxref=GenBank:WP_059529828.1;Name=WP_059529828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496387.1;locus_tag=LDO45_RS11780;product=Mth938-like domain-containing protein;protein_id=WP_059529828.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 63676 64914 . + . ID=gene-LDO45_RS11785;Name=LDO45_RS11785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11785;old_locus_tag=BDI4_200065 NZ_CAJZAS010000113.1 Protein Homology CDS 63676 64914 . + 0 ID=cds-WP_059529831.1;Parent=gene-LDO45_RS11785;Dbxref=GenBank:WP_059529831.1;Name=WP_059529831.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758358.1;locus_tag=LDO45_RS11785;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_059529831.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 64967 66295 . + . ID=gene-LDO45_RS11790;Name=LDO45_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11790;old_locus_tag=BDI4_200066 NZ_CAJZAS010000113.1 Protein Homology CDS 64967 66295 . + 0 ID=cds-WP_059529834.1;Parent=gene-LDO45_RS11790;Dbxref=GenBank:WP_059529834.1;Name=WP_059529834.1;Ontology_term=GO:0006520,GO:0004412;gbkey=CDS;go_function=homoserine dehydrogenase activity|0004412||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482858.1;locus_tag=LDO45_RS11790;product=homoserine dehydrogenase;protein_id=WP_059529834.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 66310 67761 . + . ID=gene-LDO45_RS11795;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=LDO45_RS11795;old_locus_tag=BDI4_200067 NZ_CAJZAS010000113.1 Protein Homology CDS 66310 67761 . + 0 ID=cds-WP_223961742.1;Parent=gene-LDO45_RS11795;Dbxref=GenBank:WP_223961742.1;Name=WP_223961742.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896870.1;locus_tag=LDO45_RS11795;product=threonine synthase;protein_id=WP_223961742.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 68029 69276 . + . ID=gene-LDO45_RS11800;Name=glp;gbkey=Gene;gene=glp;gene_biotype=protein_coding;locus_tag=LDO45_RS11800;old_locus_tag=BDI4_200068 NZ_CAJZAS010000113.1 Protein Homology CDS 68029 69276 . + 0 ID=cds-WP_059529840.1;Parent=gene-LDO45_RS11800;Dbxref=GenBank:WP_059529840.1;Name=WP_059529840.1;Ontology_term=GO:0006777,GO:0061599,GO:1990586;gbkey=CDS;gene=glp;go_component=divisome complex|1990586||IEA;go_function=molybdopterin molybdotransferase activity|0061599||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255166.1;locus_tag=LDO45_RS11800;product=gephyrin-like molybdotransferase Glp;protein_id=WP_059529840.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 69296 69553 . + . ID=gene-LDO45_RS11805;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=LDO45_RS11805;old_locus_tag=BDI4_200069 NZ_CAJZAS010000113.1 Protein Homology CDS 69296 69553 . + 0 ID=cds-WP_006758354.1;Parent=gene-LDO45_RS11805;Dbxref=GenBank:WP_006758354.1;Name=WP_006758354.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaD;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115001.1;locus_tag=LDO45_RS11805;product=molybdopterin converting factor subunit 1;protein_id=WP_006758354.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 69714 70190 . + . ID=gene-LDO45_RS11810;Name=LDO45_RS11810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11810;old_locus_tag=BDI4_200070 NZ_CAJZAS010000113.1 Protein Homology CDS 69714 70190 . + 0 ID=cds-WP_223961744.1;Parent=gene-LDO45_RS11810;Dbxref=GenBank:WP_223961744.1;Name=WP_223961744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549662.1;locus_tag=LDO45_RS11810;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WP_223961744.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 70260 70820 . - . ID=gene-LDO45_RS11815;Name=LDO45_RS11815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11815;old_locus_tag=BDI4_200072 NZ_CAJZAS010000113.1 Protein Homology CDS 70260 70820 . - 0 ID=cds-WP_223961746.1;Parent=gene-LDO45_RS11815;Dbxref=GenBank:WP_223961746.1;Name=WP_223961746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755404.1;locus_tag=LDO45_RS11815;product=group III truncated hemoglobin;protein_id=WP_223961746.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 71085 71603 . + . ID=gene-LDO45_RS11820;Name=LDO45_RS11820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11820;old_locus_tag=BDI4_200074 NZ_CAJZAS010000113.1 Protein Homology CDS 71085 71603 . + 0 ID=cds-WP_059529849.1;Parent=gene-LDO45_RS11820;Dbxref=GenBank:WP_059529849.1;Name=WP_059529849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755403.1;locus_tag=LDO45_RS11820;product=Rrf2 family transcriptional regulator;protein_id=WP_059529849.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 71760 74357 . + . ID=gene-LDO45_RS11825;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=LDO45_RS11825;old_locus_tag=BDI4_200075 NZ_CAJZAS010000113.1 Protein Homology CDS 71760 74357 . + 0 ID=cds-WP_059529853.1;Parent=gene-LDO45_RS11825;Dbxref=GenBank:WP_059529853.1;Name=WP_059529853.1;Ontology_term=GO:0009408,GO:0042026,GO:0005737;gbkey=CDS;gene=clpB;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890767.1;locus_tag=LDO45_RS11825;product=ATP-dependent chaperone ClpB;protein_id=WP_059529853.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 74486 74914 . - . ID=gene-LDO45_RS11830;Name=LDO45_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11830;old_locus_tag=BDI4_200076 NZ_CAJZAS010000113.1 Protein Homology CDS 74486 74914 . - 0 ID=cds-WP_059529856.1;Parent=gene-LDO45_RS11830;Dbxref=GenBank:WP_059529856.1;Name=WP_059529856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010103168.1;locus_tag=LDO45_RS11830;product=YidB family protein;protein_id=WP_059529856.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 75003 75584 . - . ID=gene-LDO45_RS11835;Name=LDO45_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11835;old_locus_tag=BDI4_200077 NZ_CAJZAS010000113.1 Protein Homology CDS 75003 75584 . - 0 ID=cds-WP_223961748.1;Parent=gene-LDO45_RS11835;Dbxref=GenBank:WP_223961748.1;Name=WP_223961748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407809.1;locus_tag=LDO45_RS11835;product=helix-hairpin-helix domain-containing protein;protein_id=WP_223961748.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 75871 76332 . + . ID=gene-LDO45_RS11840;Name=LDO45_RS11840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11840;old_locus_tag=BDI4_200078 NZ_CAJZAS010000113.1 Protein Homology CDS 75871 76332 . + 0 ID=cds-WP_223961750.1;Parent=gene-LDO45_RS11840;Dbxref=GenBank:WP_223961750.1;Name=WP_223961750.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484054.1;locus_tag=LDO45_RS11840;product=MerR family transcriptional regulator;protein_id=WP_223961750.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 76316 76750 . + . ID=gene-LDO45_RS11845;Name=LDO45_RS11845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11845;old_locus_tag=BDI4_200079 NZ_CAJZAS010000113.1 Protein Homology CDS 76316 76750 . + 0 ID=cds-WP_059698510.1;Parent=gene-LDO45_RS11845;Dbxref=GenBank:WP_059698510.1;Name=WP_059698510.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478650.1;locus_tag=LDO45_RS11845;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_059698510.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 76770 78686 . - . ID=gene-LDO45_RS11850;Name=LDO45_RS11850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11850;old_locus_tag=BDI4_200080 NZ_CAJZAS010000113.1 Protein Homology CDS 76770 78686 . - 0 ID=cds-WP_175916355.1;Parent=gene-LDO45_RS11850;Dbxref=GenBank:WP_175916355.1;Name=WP_175916355.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407812.1;locus_tag=LDO45_RS11850;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_175916355.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 79209 80267 . + . ID=gene-LDO45_RS11855;Name=LDO45_RS11855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11855;old_locus_tag=BDI4_200081 NZ_CAJZAS010000113.1 Protein Homology CDS 79209 80267 . + 0 ID=cds-WP_223961752.1;Parent=gene-LDO45_RS11855;Dbxref=GenBank:WP_223961752.1;Name=WP_223961752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657042.1;locus_tag=LDO45_RS11855;product=ATP-NAD kinase family protein;protein_id=WP_223961752.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 80368 81351 . + . ID=gene-LDO45_RS11860;Name=LDO45_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11860;old_locus_tag=BDI4_200082 NZ_CAJZAS010000113.1 Protein Homology CDS 80368 81351 . + 0 ID=cds-WP_223961754.1;Parent=gene-LDO45_RS11860;Dbxref=GenBank:WP_223961754.1;Name=WP_223961754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013094295.1;locus_tag=LDO45_RS11860;product=thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha;protein_id=WP_223961754.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq gene 81420 82424 . + . ID=gene-LDO45_RS11865;Name=LDO45_RS11865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11865;old_locus_tag=BDI4_200083 NZ_CAJZAS010000113.1 Protein Homology CDS 81420 82424 . + 0 ID=cds-WP_059529875.1;Parent=gene-LDO45_RS11865;Dbxref=GenBank:WP_059529875.1;Name=WP_059529875.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364013.1;locus_tag=LDO45_RS11865;product=alpha-ketoacid dehydrogenase subunit beta;protein_id=WP_059529875.1;transl_table=11 NZ_CAJZAS010000113.1 RefSeq pseudogene 82429 83178 . + . ID=gene-LDO45_RS11870;Name=LDO45_RS11870;end_range=83178,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS11870;old_locus_tag=BDI4_200084;partial=true;pseudo=true NZ_CAJZAS010000113.1 Protein Homology CDS 82429 83178 . + 0 ID=cds-LDO45_RS11870;Parent=gene-LDO45_RS11870;Note=too many ambiguous residues%3B incomplete%3B missing C-terminus;end_range=83178,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328642.1;locus_tag=LDO45_RS11870;partial=true;product=acetoin dehydrogenase dihydrolipoyllysine-residue acetyltransferase subunit;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000114.1 1 528 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000114.1 RefSeq region 1 528 . + . ID=NZ_CAJZAS010000114.1:1..528;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_200 ##sequence-region NZ_CAJZAS010000115.1 1 624 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000115.1 RefSeq region 1 624 . + . ID=NZ_CAJZAS010000115.1:1..624;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_201 NZ_CAJZAS010000115.1 RefSeq gene 1 150 . + . ID=gene-LDO45_RS11875;Name=LDO45_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11875;old_locus_tag=BDI4_2010001;partial=true;start_range=.,1 NZ_CAJZAS010000115.1 Protein Homology CDS 1 150 . + 0 ID=cds-WP_223961756.1;Parent=gene-LDO45_RS11875;Dbxref=GenBank:WP_223961756.1;Name=WP_223961756.1;Ontology_term=GO:0010124;gbkey=CDS;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752454.1;locus_tag=LDO45_RS11875;partial=true;product=Phenylacetic acid catabolic protein;protein_id=WP_223961756.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000115.1 RefSeq pseudogene 176 522 . + . ID=gene-LDO45_RS11880;Name=LDO45_RS11880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS11880;pseudo=true NZ_CAJZAS010000115.1 Protein Homology CDS 176 522 . + 0 ID=cds-LDO45_RS11880;Parent=gene-LDO45_RS11880;Note=frameshifted%3B too many ambiguous residues;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655751.1;locus_tag=LDO45_RS11880;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000116.1 1 1372 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000116.1 RefSeq region 1 1372 . + . ID=NZ_CAJZAS010000116.1:1..1372;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_202 NZ_CAJZAS010000116.1 RefSeq pseudogene 1 1266 . + . ID=gene-LDO45_RS11885;Name=LDO45_RS11885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS11885;old_locus_tag=BDI4_2020001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000116.1 Protein Homology CDS 1 1266 . + 1 ID=cds-LDO45_RS11885;Parent=gene-LDO45_RS11885;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing N-terminus;Ontology_term=GO:0006011,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=UDP-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545161.1;locus_tag=LDO45_RS11885;partial=true;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAS010000117.1 1 5695 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000117.1 RefSeq region 1 5695 . + . ID=NZ_CAJZAS010000117.1:1..5695;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_203 NZ_CAJZAS010000117.1 RefSeq pseudogene 1 289 . - . ID=gene-LDO45_RS11890;Name=LDO45_RS11890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS11890;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000117.1 Protein Homology CDS 1 289 . - 0 ID=cds-LDO45_RS11890;Parent=gene-LDO45_RS11890;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213905.1;locus_tag=LDO45_RS11890;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000117.1 RefSeq gene 655 996 . + . ID=gene-LDO45_RS34545;Name=LDO45_RS34545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34545;old_locus_tag=BDI4_2030003;partial=true;start_range=.,655 NZ_CAJZAS010000117.1 Protein Homology CDS 655 996 . + 0 ID=cds-WP_374109531.1;Parent=gene-LDO45_RS34545;Dbxref=GenBank:WP_374109531.1;Name=WP_374109531.1;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491806.1;locus_tag=LDO45_RS34545;partial=true;product=GntR family transcriptional regulator;protein_id=WP_374109531.1;start_range=.,655;transl_table=11 NZ_CAJZAS010000117.1 RefSeq gene 1004 2380 . + . ID=gene-LDO45_RS11900;Name=LDO45_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11900;old_locus_tag=BDI4_2030004 NZ_CAJZAS010000117.1 Protein Homology CDS 1004 2380 . + 0 ID=cds-WP_223961757.1;Parent=gene-LDO45_RS11900;Dbxref=GenBank:WP_223961757.1;Name=WP_223961757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756770.1;locus_tag=LDO45_RS11900;product=amidase;protein_id=WP_223961757.1;transl_table=11 NZ_CAJZAS010000117.1 RefSeq gene 2530 3042 . + . ID=gene-LDO45_RS11905;Name=LDO45_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11905;old_locus_tag=BDI4_2030005 NZ_CAJZAS010000117.1 Protein Homology CDS 2530 3042 . + 0 ID=cds-WP_059467072.1;Parent=gene-LDO45_RS11905;Dbxref=GenBank:WP_059467072.1;Name=WP_059467072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656245.1;locus_tag=LDO45_RS11905;product=disulfide bond formation protein B;protein_id=WP_059467072.1;transl_table=11 NZ_CAJZAS010000117.1 RefSeq gene 3657 4661 . + . ID=gene-LDO45_RS11910;Name=xdhC;gbkey=Gene;gene=xdhC;gene_biotype=protein_coding;locus_tag=LDO45_RS11910;old_locus_tag=BDI4_2030006 NZ_CAJZAS010000117.1 Protein Homology CDS 3657 4661 . + 0 ID=cds-WP_223961758.1;Parent=gene-LDO45_RS11910;Dbxref=GenBank:WP_223961758.1;Name=WP_223961758.1;Ontology_term=GO:0009115,GO:0065003,GO:0043546;gbkey=CDS;gene=xdhC;go_function=molybdopterin cofactor binding|0043546||IEA;go_process=xanthine catabolic process|0009115||IEA,protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756768.1;locus_tag=LDO45_RS11910;product=xanthine dehydrogenase accessory protein XdhC;protein_id=WP_223961758.1;transl_table=11 NZ_CAJZAS010000117.1 RefSeq gene 4680 5534 . + . ID=gene-LDO45_RS11915;Name=LDO45_RS11915;end_range=5534,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11915;old_locus_tag=BDI4_2030008;partial=true NZ_CAJZAS010000117.1 Protein Homology CDS 4680 5534 . + 0 ID=cds-WP_223961759.1;Parent=gene-LDO45_RS11915;Dbxref=GenBank:WP_223961759.1;Name=WP_223961759.1;Ontology_term=GO:0006146,GO:0000034;end_range=5534,.;gbkey=CDS;go_function=adenine deaminase activity|0000034||IEA;go_process=adenine catabolic process|0006146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189005.1;locus_tag=LDO45_RS11915;partial=true;product=adenosine deaminase;protein_id=WP_223961759.1;transl_table=11 ##sequence-region NZ_CAJZAS010000118.1 1 528 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000118.1 RefSeq region 1 528 . + . ID=NZ_CAJZAS010000118.1:1..528;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_204 NZ_CAJZAS010000118.1 RefSeq gene 1 528 . - . ID=gene-LDO45_RS11920;Name=LDO45_RS11920;end_range=528,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11920;partial=true;start_range=.,1 NZ_CAJZAS010000118.1 Protein Homology CDS 1 528 . - 2 ID=cds-WP_223961762.1;Parent=gene-LDO45_RS11920;Dbxref=GenBank:WP_223961762.1;Name=WP_223961762.1;end_range=528,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009899818.1;locus_tag=LDO45_RS11920;partial=true;product=DUF2827 family protein;protein_id=WP_223961762.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAS010000119.1 1 528 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000119.1 RefSeq region 1 528 . + . ID=NZ_CAJZAS010000119.1:1..528;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_205 NZ_CAJZAS010000119.1 RefSeq gene 1 528 . - . ID=gene-LDO45_RS11925;Name=LDO45_RS11925;end_range=528,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11925;partial=true;start_range=.,1 NZ_CAJZAS010000119.1 Protein Homology CDS 1 528 . - 2 ID=cds-WP_223961763.1;Parent=gene-LDO45_RS11925;Dbxref=GenBank:WP_223961763.1;Name=WP_223961763.1;end_range=528,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009899818.1;locus_tag=LDO45_RS11925;partial=true;product=DUF2827 family protein;protein_id=WP_223961763.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAS010000120.1 1 925 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000120.1 RefSeq region 1 925 . + . ID=NZ_CAJZAS010000120.1:1..925;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_206 NZ_CAJZAS010000120.1 RefSeq pseudogene 1 216 . + . ID=gene-LDO45_RS11930;Name=LDO45_RS11930;end_range=216,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS11930;old_locus_tag=BDI4_2060001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000120.1 Protein Homology CDS 1 216 . + 2 ID=cds-LDO45_RS11930;Parent=gene-LDO45_RS11930;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=216,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751814.1;locus_tag=LDO45_RS11930;partial=true;product=AraC family transcriptional regulator;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000120.1 cmsearch riboswitch 370 563 . + . ID=id-NZ_CAJZAS010000120.1:370..563;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch ##sequence-region NZ_CAJZAS010000121.1 1 6382 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000121.1 RefSeq region 1 6382 . + . ID=NZ_CAJZAS010000121.1:1..6382;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_207 NZ_CAJZAS010000121.1 RefSeq pseudogene 1 1517 . + . ID=gene-LDO45_RS11935;Name=LDO45_RS11935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS11935;old_locus_tag=BDI4_2070001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000121.1 Protein Homology CDS 1 1517 . + 2 ID=cds-LDO45_RS11935;Parent=gene-LDO45_RS11935;Note=too many ambiguous residues%3B incomplete%3B missing N-terminus;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090495.1;locus_tag=LDO45_RS11935;partial=true;product=type VI secretion system Vgr family protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000121.1 RefSeq gene 1432 2148 . + . ID=gene-LDO45_RS11940;Name=LDO45_RS11940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11940;old_locus_tag=BDI4_2070002 NZ_CAJZAS010000121.1 Protein Homology CDS 1432 2148 . + 0 ID=cds-WP_223961766.1;Parent=gene-LDO45_RS11940;Dbxref=GenBank:WP_223961766.1;Name=WP_223961766.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021611.5;locus_tag=LDO45_RS11940;product=DUF2345 domain-containing protein;protein_id=WP_223961766.1;transl_table=11 NZ_CAJZAS010000121.1 RefSeq gene 2187 4217 . + . ID=gene-LDO45_RS11945;Name=LDO45_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11945;old_locus_tag=BDI4_2070003 NZ_CAJZAS010000121.1 Protein Homology CDS 2187 4217 . + 0 ID=cds-WP_175916858.1;Parent=gene-LDO45_RS11945;Dbxref=GenBank:WP_175916858.1;Name=WP_175916858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363669.1;locus_tag=LDO45_RS11945;product=phospholipase D-like domain-containing protein;protein_id=WP_175916858.1;transl_table=11 NZ_CAJZAS010000121.1 RefSeq gene 4231 5741 . + . ID=gene-LDO45_RS11950;Name=LDO45_RS11950;end_range=5741,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11950;old_locus_tag=BDI4_2070004;partial=true NZ_CAJZAS010000121.1 Protein Homology CDS 4231 5741 . + 0 ID=cds-WP_223961768.1;Parent=gene-LDO45_RS11950;Dbxref=GenBank:WP_223961768.1;Name=WP_223961768.1;end_range=5741,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040400.4;locus_tag=LDO45_RS11950;partial=true;product=tetratricopeptide repeat protein;protein_id=WP_223961768.1;transl_table=11 NZ_CAJZAS010000121.1 RefSeq gene 6142 6382 . - . ID=gene-LDO45_RS11955;Name=LDO45_RS11955;end_range=6382,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11955;old_locus_tag=BDI4_2070007;partial=true;start_range=.,6142 NZ_CAJZAS010000121.1 Protein Homology CDS 6142 6382 . - 0 ID=cds-WP_223961770.1;Parent=gene-LDO45_RS11955;Dbxref=GenBank:WP_223961770.1;Name=WP_223961770.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;end_range=6382,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328334.1;locus_tag=LDO45_RS11955;partial=true;product=LysR family transcriptional regulator;protein_id=WP_223961770.1;start_range=.,6142;transl_table=11 ##sequence-region NZ_CAJZAS010000122.1 1 1083 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000122.1 RefSeq region 1 1083 . + . ID=NZ_CAJZAS010000122.1:1..1083;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_208 NZ_CAJZAS010000122.1 RefSeq gene 1 441 . + . ID=gene-LDO45_RS11960;Name=LDO45_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11960;old_locus_tag=BDI4_2080001;partial=true;start_range=.,1 NZ_CAJZAS010000122.1 Protein Homology CDS 1 441 . + 0 ID=cds-WP_223961772.1;Parent=gene-LDO45_RS11960;Dbxref=GenBank:WP_223961772.1;Name=WP_223961772.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762847.1;locus_tag=LDO45_RS11960;partial=true;product=TetR/AcrR family transcriptional regulator;protein_id=WP_223961772.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000122.1 RefSeq pseudogene 676 1083 . + . ID=gene-LDO45_RS11965;Name=LDO45_RS11965;end_range=1083,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS11965;partial=true;pseudo=true NZ_CAJZAS010000122.1 Protein Homology CDS 676 1083 . + 0 ID=cds-LDO45_RS11965;Parent=gene-LDO45_RS11965;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1083,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009913862.1;locus_tag=LDO45_RS11965;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000123.1 1 2358 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000123.1 RefSeq region 1 2358 . + . ID=NZ_CAJZAS010000123.1:1..2358;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_209 NZ_CAJZAS010000123.1 RefSeq gene 85 1104 . - . ID=gene-LDO45_RS11970;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=LDO45_RS11970;old_locus_tag=BDI4_2090001 NZ_CAJZAS010000123.1 Protein Homology CDS 85 1104 . - 0 ID=cds-WP_059523944.1;Parent=gene-LDO45_RS11970;Dbxref=GenBank:WP_059523944.1;Name=WP_059523944.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886182.1;locus_tag=LDO45_RS11970;product=biotin synthase BioB;protein_id=WP_059523944.1;transl_table=11 NZ_CAJZAS010000123.1 RefSeq gene 1141 1860 . - . ID=gene-LDO45_RS11975;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=LDO45_RS11975;old_locus_tag=BDI4_2090002 NZ_CAJZAS010000123.1 Protein Homology CDS 1141 1860 . - 0 ID=cds-WP_059703257.1;Parent=gene-LDO45_RS11975;Dbxref=GenBank:WP_059703257.1;Name=WP_059703257.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886181.1;locus_tag=LDO45_RS11975;product=dethiobiotin synthase;protein_id=WP_059703257.1;transl_table=11 NZ_CAJZAS010000123.1 RefSeq gene 1857 2358 . - . ID=gene-LDO45_RS11980;Name=LDO45_RS11980;end_range=2358,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11980;old_locus_tag=BDI4_2090003;partial=true NZ_CAJZAS010000123.1 Protein Homology CDS 1857 2358 . - 1 ID=cds-WP_223961774.1;Parent=gene-LDO45_RS11980;Dbxref=GenBank:WP_223961774.1;Name=WP_223961774.1;Ontology_term=GO:0009058,GO:0030170;end_range=2358,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329324.1;locus_tag=LDO45_RS11980;partial=true;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_223961774.1;transl_table=11 ##sequence-region NZ_CAJZAS010000124.1 1 178379 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000124.1 RefSeq region 1 178379 . + . ID=NZ_CAJZAS010000124.1:1..178379;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_21 NZ_CAJZAS010000124.1 RefSeq gene 1 593 . - . ID=gene-LDO45_RS11985;Name=LDO45_RS11985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11985;partial=true;start_range=.,1 NZ_CAJZAS010000124.1 Protein Homology CDS 1 593 . - 0 ID=cds-WP_223961775.1;Parent=gene-LDO45_RS11985;Dbxref=GenBank:WP_223961775.1;Name=WP_223961775.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480553.1;locus_tag=LDO45_RS11985;partial=true;product=DUF2827 family protein;protein_id=WP_223961775.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq pseudogene 826 956 . + . ID=gene-LDO45_RS11990;Name=LDO45_RS11990;end_range=956,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS11990;partial=true;pseudo=true;start_range=.,826 NZ_CAJZAS010000124.1 Protein Homology CDS 826 956 . + 0 ID=cds-LDO45_RS11990;Parent=gene-LDO45_RS11990;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=956,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491127.1;locus_tag=LDO45_RS11990;partial=true;product=transposase;pseudo=true;start_range=.,826;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 1284 2185 . - . ID=gene-LDO45_RS11995;Name=LDO45_RS11995;end_range=2185,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS11995;old_locus_tag=BDI4_210003;partial=true NZ_CAJZAS010000124.1 Protein Homology CDS 1284 2185 . - 2 ID=cds-WP_223961899.1;Parent=gene-LDO45_RS11995;Dbxref=GenBank:WP_223961899.1;Name=WP_223961899.1;Ontology_term=GO:0055085,GO:0022857;end_range=2185,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756642.1;locus_tag=LDO45_RS11995;partial=true;product=MFS transporter;protein_id=WP_223961899.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq pseudogene 2313 2425 . - . ID=gene-LDO45_RS12000;Name=LDO45_RS12000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS12000;old_locus_tag=BDI4_210004;partial=true;pseudo=true;start_range=.,2313 NZ_CAJZAS010000124.1 Protein Homology CDS 2313 2425 . - 0 ID=cds-LDO45_RS12000;Parent=gene-LDO45_RS12000;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009945766.1;locus_tag=LDO45_RS12000;partial=true;product=3-oxoadipate CoA-transferase;pseudo=true;start_range=.,2313;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 3313 3855 . + . ID=gene-LDO45_RS12010;Name=LDO45_RS12010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12010;old_locus_tag=BDI4_210006 NZ_CAJZAS010000124.1 Protein Homology CDS 3313 3855 . + 0 ID=cds-WP_223961778.1;Parent=gene-LDO45_RS12010;Dbxref=GenBank:WP_223961778.1;Name=WP_223961778.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024967.5;locus_tag=LDO45_RS12010;product=class I SAM-dependent methyltransferase;protein_id=WP_223961778.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 3882 5135 . + . ID=gene-LDO45_RS12015;Name=LDO45_RS12015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12015;old_locus_tag=BDI4_210007 NZ_CAJZAS010000124.1 Protein Homology CDS 3882 5135 . + 0 ID=cds-WP_223961780.1;Parent=gene-LDO45_RS12015;Dbxref=GenBank:WP_223961780.1;Name=WP_223961780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547531.1;locus_tag=LDO45_RS12015;product=hypothetical protein;protein_id=WP_223961780.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 6253 6329 . - . ID=gene-LDO45_RS12020;Name=LDO45_RS12020;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS12020;old_locus_tag=BDI4_TRNA48 NZ_CAJZAS010000124.1 tRNAscan-SE tRNA 6253 6329 . - . ID=rna-LDO45_RS12020;Parent=gene-LDO45_RS12020;anticodon=(pos:complement(6293..6295));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS12020;product=tRNA-Ile NZ_CAJZAS010000124.1 tRNAscan-SE exon 6253 6329 . - . ID=exon-LDO45_RS12020-1;Parent=rna-LDO45_RS12020;anticodon=(pos:complement(6293..6295));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS12020;product=tRNA-Ile NZ_CAJZAS010000124.1 RefSeq gene 6343 6430 . - . ID=gene-LDO45_RS12025;Name=LDO45_RS12025;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS12025;old_locus_tag=BDI4_TRNA47 NZ_CAJZAS010000124.1 tRNAscan-SE tRNA 6343 6430 . - . ID=rna-LDO45_RS12025;Parent=gene-LDO45_RS12025;anticodon=(pos:complement(6394..6396));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS12025;product=tRNA-Ser NZ_CAJZAS010000124.1 tRNAscan-SE exon 6343 6430 . - . ID=exon-LDO45_RS12025-1;Parent=rna-LDO45_RS12025;anticodon=(pos:complement(6394..6396));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS12025;product=tRNA-Ser NZ_CAJZAS010000124.1 RefSeq gene 6435 6508 . - . ID=gene-LDO45_RS12030;Name=LDO45_RS12030;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS12030;old_locus_tag=BDI4_TRNA46 NZ_CAJZAS010000124.1 tRNAscan-SE tRNA 6435 6508 . - . ID=rna-LDO45_RS12030;Parent=gene-LDO45_RS12030;anticodon=(pos:complement(6474..6476));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS12030;product=tRNA-Gly NZ_CAJZAS010000124.1 tRNAscan-SE exon 6435 6508 . - . ID=exon-LDO45_RS12030-1;Parent=rna-LDO45_RS12030;anticodon=(pos:complement(6474..6476));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS12030;product=tRNA-Gly NZ_CAJZAS010000124.1 RefSeq gene 6764 6985 . - . ID=gene-LDO45_RS12035;Name=LDO45_RS12035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12035;old_locus_tag=BDI4_210010 NZ_CAJZAS010000124.1 GeneMarkS-2+ CDS 6764 6985 . - 0 ID=cds-WP_223961781.1;Parent=gene-LDO45_RS12035;Dbxref=GenBank:WP_223961781.1;Name=WP_223961781.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS12035;product=hypothetical protein;protein_id=WP_223961781.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 7004 7294 . - . ID=gene-LDO45_RS12040;Name=LDO45_RS12040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12040 NZ_CAJZAS010000124.1 GeneMarkS-2+ CDS 7004 7294 . - 0 ID=cds-WP_223961782.1;Parent=gene-LDO45_RS12040;Dbxref=GenBank:WP_223961782.1;Name=WP_223961782.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS12040;product=energy transducer TonB;protein_id=WP_223961782.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 7294 7761 . - . ID=gene-LDO45_RS12045;Name=LDO45_RS12045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12045;old_locus_tag=BDI4_210012 NZ_CAJZAS010000124.1 GeneMarkS-2+ CDS 7294 7761 . - 0 ID=cds-WP_223961783.1;Parent=gene-LDO45_RS12045;Dbxref=GenBank:WP_223961783.1;Name=WP_223961783.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS12045;product=hypothetical protein;protein_id=WP_223961783.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 7995 8573 . - . ID=gene-LDO45_RS12050;Name=LDO45_RS12050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12050;old_locus_tag=BDI4_210013 NZ_CAJZAS010000124.1 Protein Homology CDS 7995 8573 . - 0 ID=cds-WP_223961784.1;Parent=gene-LDO45_RS12050;Dbxref=GenBank:WP_223961784.1;Name=WP_223961784.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: protein motif:HMM:NF033564.0;locus_tag=LDO45_RS12050;product=ISAs1 family transposase;protein_id=WP_223961784.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 8584 8862 . - . ID=gene-LDO45_RS12055;Name=LDO45_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12055;old_locus_tag=BDI4_210014 NZ_CAJZAS010000124.1 GeneMarkS-2+ CDS 8584 8862 . - 0 ID=cds-WP_223961785.1;Parent=gene-LDO45_RS12055;Dbxref=GenBank:WP_223961785.1;Name=WP_223961785.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS12055;product=hypothetical protein;protein_id=WP_223961785.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 9452 9853 . - . ID=gene-LDO45_RS12060;Name=LDO45_RS12060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12060;old_locus_tag=BDI4_210015 NZ_CAJZAS010000124.1 Protein Homology CDS 9452 9853 . - 0 ID=cds-WP_223961786.1;Parent=gene-LDO45_RS12060;Dbxref=GenBank:WP_223961786.1;Name=WP_223961786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012426931.1;locus_tag=LDO45_RS12060;product=cupin domain-containing protein;protein_id=WP_223961786.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 9867 11039 . - . ID=gene-LDO45_RS12065;Name=ampC;gbkey=Gene;gene=ampC;gene_biotype=protein_coding;locus_tag=LDO45_RS12065;old_locus_tag=BDI4_210016 NZ_CAJZAS010000124.1 Protein Homology CDS 9867 11039 . - 0 ID=cds-WP_223961787.1;Parent=gene-LDO45_RS12065;Dbxref=GenBank:WP_223961787.1;Name=WP_223961787.1;Ontology_term=GO:0008800,GO:0030288;gbkey=CDS;gene=ampC;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=beta-lactamase activity|0008800||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007177100.1;locus_tag=LDO45_RS12065;product=class C beta-lactamase;protein_id=WP_223961787.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 11247 12266 . - . ID=gene-LDO45_RS12070;Name=LDO45_RS12070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12070;old_locus_tag=BDI4_210017 NZ_CAJZAS010000124.1 Protein Homology CDS 11247 12266 . - 0 ID=cds-WP_223961788.1;Parent=gene-LDO45_RS12070;Dbxref=GenBank:WP_223961788.1;Name=WP_223961788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020229522.1;locus_tag=LDO45_RS12070;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_223961788.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 12399 14645 . - . ID=gene-LDO45_RS12075;Name=LDO45_RS12075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12075;old_locus_tag=BDI4_210018 NZ_CAJZAS010000124.1 Protein Homology CDS 12399 14645 . - 0 ID=cds-WP_223961789.1;Parent=gene-LDO45_RS12075;Dbxref=GenBank:WP_223961789.1;Name=WP_223961789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020705541.1;locus_tag=LDO45_RS12075;product=beta-glucosidase;protein_id=WP_223961789.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 14645 15817 . - . ID=gene-LDO45_RS12080;Name=LDO45_RS12080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12080;old_locus_tag=BDI4_210019 NZ_CAJZAS010000124.1 Protein Homology CDS 14645 15817 . - 0 ID=cds-WP_223961790.1;Parent=gene-LDO45_RS12080;Dbxref=GenBank:WP_223961790.1;Name=WP_223961790.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353899.1;locus_tag=LDO45_RS12080;product=porin;protein_id=WP_223961790.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq pseudogene 15912 16195 . - . ID=gene-LDO45_RS34550;Name=LDO45_RS34550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34550;pseudo=true NZ_CAJZAS010000124.1 Protein Homology CDS 15912 16195 . - 0 ID=cds-LDO45_RS34550;Parent=gene-LDO45_RS34550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014500.5;locus_tag=LDO45_RS34550;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 16665 16859 . - . ID=gene-LDO45_RS12090;Name=LDO45_RS12090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12090;old_locus_tag=BDI4_210022 NZ_CAJZAS010000124.1 Protein Homology CDS 16665 16859 . - 0 ID=cds-WP_223961791.1;Parent=gene-LDO45_RS12090;Dbxref=GenBank:WP_223961791.1;Name=WP_223961791.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014500.5;locus_tag=LDO45_RS12090;product=GntP family permease;protein_id=WP_223961791.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq pseudogene 17645 18765 . + . ID=gene-LDO45_RS12095;Name=LDO45_RS12095;end_range=18765,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS12095;partial=true;pseudo=true NZ_CAJZAS010000124.1 Protein Homology CDS 17645 18765 . + 0 ID=cds-LDO45_RS12095;Parent=gene-LDO45_RS12095;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=18765,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612266.1;locus_tag=LDO45_RS12095;partial=true;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 18897 19268 . + . ID=gene-LDO45_RS12100;Name=LDO45_RS12100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12100;old_locus_tag=BDI4_210028 NZ_CAJZAS010000124.1 Protein Homology CDS 18897 19268 . + 0 ID=cds-WP_223961792.1;Parent=gene-LDO45_RS12100;Dbxref=GenBank:WP_223961792.1;Name=WP_223961792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495095.1;locus_tag=LDO45_RS12100;product=MAPEG family protein;protein_id=WP_223961792.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 19550 20119 . + . ID=gene-LDO45_RS12105;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=LDO45_RS12105;old_locus_tag=BDI4_210029 NZ_CAJZAS010000124.1 Protein Homology CDS 19550 20119 . + 0 ID=cds-WP_374109532.1;Parent=gene-LDO45_RS12105;Dbxref=GenBank:WP_374109532.1;Name=WP_374109532.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889057.1;locus_tag=LDO45_RS12105;product=LPS assembly lipoprotein LptE;protein_id=WP_374109532.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq pseudogene 20264 20513 . + . ID=gene-LDO45_RS12110;Name=LDO45_RS12110;end_range=20513,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS12110;old_locus_tag=BDI4_210031;partial=true;pseudo=true;start_range=.,20264 NZ_CAJZAS010000124.1 Protein Homology CDS 20264 20513 . + 0 ID=cds-LDO45_RS12110;Parent=gene-LDO45_RS12110;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=20513,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011002488.1;locus_tag=LDO45_RS12110;partial=true;product=transposase;pseudo=true;start_range=.,20264;transl_table=11 NZ_CAJZAS010000124.1 RefSeq pseudogene 20596 20886 . + . ID=gene-LDO45_RS12115;Name=LDO45_RS12115;end_range=20886,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS12115;partial=true;pseudo=true NZ_CAJZAS010000124.1 Protein Homology CDS 20596 20886 . + 0 ID=cds-LDO45_RS12115;Parent=gene-LDO45_RS12115;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=20886,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558340.1;locus_tag=LDO45_RS12115;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 20946 21854 . - . ID=gene-LDO45_RS12120;Name=LDO45_RS12120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12120;old_locus_tag=BDI4_210033 NZ_CAJZAS010000124.1 GeneMarkS-2+ CDS 20946 21854 . - 0 ID=cds-WP_223961793.1;Parent=gene-LDO45_RS12120;Dbxref=GenBank:WP_223961793.1;Name=WP_223961793.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS12120;product=hypothetical protein;protein_id=WP_223961793.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 21829 22017 . - . ID=gene-LDO45_RS12125;Name=LDO45_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12125;old_locus_tag=BDI4_210034 NZ_CAJZAS010000124.1 GeneMarkS-2+ CDS 21829 22017 . - 0 ID=cds-WP_223961794.1;Parent=gene-LDO45_RS12125;Dbxref=GenBank:WP_223961794.1;Name=WP_223961794.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS12125;product=hypothetical protein;protein_id=WP_223961794.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 22162 22410 . + . ID=gene-LDO45_RS12130;Name=LDO45_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12130;old_locus_tag=BDI4_210035 NZ_CAJZAS010000124.1 GeneMarkS-2+ CDS 22162 22410 . + 0 ID=cds-WP_223961795.1;Parent=gene-LDO45_RS12130;Dbxref=GenBank:WP_223961795.1;Name=WP_223961795.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS12130;product=hypothetical protein;protein_id=WP_223961795.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 22431 23141 . - . ID=gene-LDO45_RS12135;Name=aqpZ;gbkey=Gene;gene=aqpZ;gene_biotype=protein_coding;locus_tag=LDO45_RS12135;old_locus_tag=BDI4_210036 NZ_CAJZAS010000124.1 Protein Homology CDS 22431 23141 . - 0 ID=cds-WP_223961903.1;Parent=gene-LDO45_RS12135;Dbxref=GenBank:WP_223961903.1;Name=WP_223961903.1;Ontology_term=GO:0006833,GO:0015250;gbkey=CDS;gene=aqpZ;go_function=water channel activity|0015250||IEA;go_process=water transport|0006833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751070.1;locus_tag=LDO45_RS12135;product=aquaporin Z;protein_id=WP_223961903.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 23901 24248 . + . ID=gene-LDO45_RS12140;Name=LDO45_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12140 NZ_CAJZAS010000124.1 GeneMarkS-2+ CDS 23901 24248 . + 0 ID=cds-WP_223961796.1;Parent=gene-LDO45_RS12140;Dbxref=GenBank:WP_223961796.1;Name=WP_223961796.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS12140;product=hypothetical protein;protein_id=WP_223961796.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 24295 24708 . - . ID=gene-LDO45_RS12145;Name=LDO45_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12145;old_locus_tag=BDI4_210038 NZ_CAJZAS010000124.1 Protein Homology CDS 24295 24708 . - 0 ID=cds-WP_223961904.1;Parent=gene-LDO45_RS12145;Dbxref=GenBank:WP_223961904.1;Name=WP_223961904.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008918950.1;locus_tag=LDO45_RS12145;product=VOC family protein;protein_id=WP_223961904.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 24815 25723 . + . ID=gene-LDO45_RS12150;Name=LDO45_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12150 NZ_CAJZAS010000124.1 Protein Homology CDS 24815 25723 . + 0 ID=cds-WP_223961797.1;Parent=gene-LDO45_RS12150;Dbxref=GenBank:WP_223961797.1;Name=WP_223961797.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF047254.1;locus_tag=LDO45_RS12150;product=hypothetical protein;protein_id=WP_223961797.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 26155 26640 . + . ID=gene-LDO45_RS12155;Name=LDO45_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12155;old_locus_tag=BDI4_210043 NZ_CAJZAS010000124.1 Protein Homology CDS 26155 26640 . + 0 ID=cds-WP_374109533.1;Parent=gene-LDO45_RS12155;Dbxref=GenBank:WP_374109533.1;Name=WP_374109533.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037025.5;locus_tag=LDO45_RS12155;product=hypothetical protein;protein_id=WP_374109533.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 26794 27054 . - . ID=gene-LDO45_RS12160;Name=LDO45_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12160;old_locus_tag=BDI4_210044 NZ_CAJZAS010000124.1 GeneMarkS-2+ CDS 26794 27054 . - 0 ID=cds-WP_223961799.1;Parent=gene-LDO45_RS12160;Dbxref=GenBank:WP_223961799.1;Name=WP_223961799.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS12160;product=hypothetical protein;protein_id=WP_223961799.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 27442 27834 . + . ID=gene-LDO45_RS12165;Name=LDO45_RS12165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12165;old_locus_tag=BDI4_210045 NZ_CAJZAS010000124.1 GeneMarkS-2+ CDS 27442 27834 . + 0 ID=cds-WP_223961800.1;Parent=gene-LDO45_RS12165;Dbxref=GenBank:WP_223961800.1;Name=WP_223961800.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS12165;product=hypothetical protein;protein_id=WP_223961800.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 27831 28022 . + . ID=gene-LDO45_RS12170;Name=LDO45_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12170;old_locus_tag=BDI4_210046 NZ_CAJZAS010000124.1 GeneMarkS-2+ CDS 27831 28022 . + 0 ID=cds-WP_223961801.1;Parent=gene-LDO45_RS12170;Dbxref=GenBank:WP_223961801.1;Name=WP_223961801.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS12170;product=hypothetical protein;protein_id=WP_223961801.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 28494 28811 . + . ID=gene-LDO45_RS12175;Name=LDO45_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12175;old_locus_tag=BDI4_210048 NZ_CAJZAS010000124.1 GeneMarkS-2+ CDS 28494 28811 . + 0 ID=cds-WP_223961802.1;Parent=gene-LDO45_RS12175;Dbxref=GenBank:WP_223961802.1;Name=WP_223961802.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS12175;product=hypothetical protein;protein_id=WP_223961802.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 28989 29540 . + . ID=gene-LDO45_RS12180;Name=LDO45_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12180;old_locus_tag=BDI4_210049 NZ_CAJZAS010000124.1 GeneMarkS-2+ CDS 28989 29540 . + 0 ID=cds-WP_223961804.1;Parent=gene-LDO45_RS12180;Dbxref=GenBank:WP_223961804.1;Name=WP_223961804.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS12180;product=oxidoreductase;protein_id=WP_223961804.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 30072 30290 . + . ID=gene-LDO45_RS12185;Name=LDO45_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12185;old_locus_tag=BDI4_210051 NZ_CAJZAS010000124.1 GeneMarkS-2+ CDS 30072 30290 . + 0 ID=cds-WP_223961806.1;Parent=gene-LDO45_RS12185;Dbxref=GenBank:WP_223961806.1;Name=WP_223961806.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS12185;product=hypothetical protein;protein_id=WP_223961806.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 30330 30602 . + . ID=gene-LDO45_RS12190;Name=LDO45_RS12190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12190;old_locus_tag=BDI4_210052 NZ_CAJZAS010000124.1 GeneMarkS-2+ CDS 30330 30602 . + 0 ID=cds-WP_223961808.1;Parent=gene-LDO45_RS12190;Dbxref=GenBank:WP_223961808.1;Name=WP_223961808.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS12190;product=hypothetical protein;protein_id=WP_223961808.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq pseudogene 30642 31091 . + . ID=gene-LDO45_RS12195;Name=LDO45_RS12195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS12195;pseudo=true NZ_CAJZAS010000124.1 Protein Homology CDS 30642 31091 . + 0 ID=cds-LDO45_RS12195;Parent=gene-LDO45_RS12195;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022494.5;locus_tag=LDO45_RS12195;product=DUF2612 domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 31349 31837 . + . ID=gene-LDO45_RS12200;Name=LDO45_RS12200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12200;old_locus_tag=BDI4_210056 NZ_CAJZAS010000124.1 GeneMarkS-2+ CDS 31349 31837 . + 0 ID=cds-WP_223961810.1;Parent=gene-LDO45_RS12200;Dbxref=GenBank:WP_223961810.1;Name=WP_223961810.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS12200;product=hypothetical protein;protein_id=WP_223961810.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 31992 32216 . + . ID=gene-LDO45_RS34555;Name=LDO45_RS34555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34555;old_locus_tag=BDI4_210057 NZ_CAJZAS010000124.1 Protein Homology CDS 31992 32216 . + 0 ID=cds-WP_223961812.1;Parent=gene-LDO45_RS34555;Dbxref=GenBank:WP_223961812.1;Name=WP_223961812.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015437.5;locus_tag=LDO45_RS34555;product=autoinducer binding domain-containing protein;protein_id=WP_223961812.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 32932 33225 . + . ID=gene-LDO45_RS12210;Name=LDO45_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12210;old_locus_tag=BDI4_210058 NZ_CAJZAS010000124.1 Protein Homology CDS 32932 33225 . + 0 ID=cds-WP_223961814.1;Parent=gene-LDO45_RS12210;Dbxref=GenBank:WP_223961814.1;Name=WP_223961814.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532451.1;locus_tag=LDO45_RS12210;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_223961814.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 33281 33679 . + . ID=gene-LDO45_RS12215;Name=LDO45_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12215 NZ_CAJZAS010000124.1 GeneMarkS-2+ CDS 33281 33679 . + 0 ID=cds-WP_223961816.1;Parent=gene-LDO45_RS12215;Dbxref=GenBank:WP_223961816.1;Name=WP_223961816.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS12215;product=hypothetical protein;protein_id=WP_223961816.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq pseudogene 33568 34824 . - . ID=gene-LDO45_RS34405;Name=LDO45_RS34405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34405;pseudo=true NZ_CAJZAS010000124.1 Protein Homology CDS 33568 34824 . - 0 ID=cds-LDO45_RS34405;Parent=gene-LDO45_RS34405;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009977951.1;locus_tag=LDO45_RS34405;product=tyrosine-type recombinase/integrase;pseudo=true;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 34988 35083 . - . ID=gene-LDO45_RS12225;Name=LDO45_RS12225;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS12225 NZ_CAJZAS010000124.1 tRNAscan-SE tRNA 34988 35083 . - . ID=rna-LDO45_RS12225;Parent=gene-LDO45_RS12225;anticodon=(pos:complement(35047..35049));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS12225;product=tRNA-Sec NZ_CAJZAS010000124.1 tRNAscan-SE exon 34988 35083 . - . ID=exon-LDO45_RS12225-1;Parent=rna-LDO45_RS12225;anticodon=(pos:complement(35047..35049));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS12225;product=tRNA-Sec NZ_CAJZAS010000124.1 RefSeq gene 35114 37039 . - . ID=gene-LDO45_RS12230;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=LDO45_RS12230;old_locus_tag=BDI4_210063 NZ_CAJZAS010000124.1 Protein Homology CDS 35114 37039 . - 0 ID=cds-WP_223961819.1;Parent=gene-LDO45_RS12230;Dbxref=GenBank:WP_223961819.1;Name=WP_223961819.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495930.1;locus_tag=LDO45_RS12230;product=selenocysteine-specific translation elongation factor;protein_id=WP_223961819.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 37036 38475 . - . ID=gene-LDO45_RS12235;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=LDO45_RS12235;old_locus_tag=BDI4_210064 NZ_CAJZAS010000124.1 Protein Homology CDS 37036 38475 . - 0 ID=cds-WP_223961821.1;Parent=gene-LDO45_RS12235;Dbxref=GenBank:WP_223961821.1;Name=WP_223961821.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899925.1;locus_tag=LDO45_RS12235;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_223961821.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 38533 39468 . - . ID=gene-LDO45_RS12240;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=LDO45_RS12240;old_locus_tag=BDI4_210065 NZ_CAJZAS010000124.1 Protein Homology CDS 38533 39468 . - 0 ID=cds-WP_179949127.1;Parent=gene-LDO45_RS12240;Dbxref=GenBank:WP_179949127.1;Name=WP_179949127.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467868.1;locus_tag=LDO45_RS12240;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_179949127.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 39578 40204 . - . ID=gene-LDO45_RS12245;Name=LDO45_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12245;old_locus_tag=BDI4_210066 NZ_CAJZAS010000124.1 Protein Homology CDS 39578 40204 . - 0 ID=cds-WP_223961823.1;Parent=gene-LDO45_RS12245;Dbxref=GenBank:WP_223961823.1;Name=WP_223961823.1;Ontology_term=GO:0009061,GO:0008863,GO:0009055,GO:0009326;gbkey=CDS;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415371.1;locus_tag=LDO45_RS12245;product=formate dehydrogenase subunit gamma;protein_id=WP_223961823.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 40201 41115 . - . ID=gene-LDO45_RS12250;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=LDO45_RS12250;old_locus_tag=BDI4_210067 NZ_CAJZAS010000124.1 Protein Homology CDS 40201 41115 . - 0 ID=cds-WP_223961824.1;Parent=gene-LDO45_RS12250;Dbxref=GenBank:WP_223961824.1;Name=WP_223961824.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019256332.1;locus_tag=LDO45_RS12250;product=formate dehydrogenase subunit beta;protein_id=WP_223961824.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 41126 44197 . - . ID=gene-LDO45_RS12255;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=LDO45_RS12255;old_locus_tag=BDI4_210068 NZ_CAJZAS010000124.1 Protein Homology CDS 41126 44197 . - 0 ID=cds-WP_223961826.1;Parent=gene-LDO45_RS12255;Dbxref=GenBank:WP_223961826.1;Name=WP_223961826.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004528945.1;locus_tag=LDO45_RS12255;product=formate dehydrogenase-N subunit alpha;protein_id=WP_223961826.1;transl_except=(pos:complement(43607..43609)%2Caa:Sec);transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 44339 45253 . + . ID=gene-LDO45_RS12260;Name=LDO45_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12260;old_locus_tag=BDI4_210070 NZ_CAJZAS010000124.1 Protein Homology CDS 44339 45253 . + 0 ID=cds-WP_223961827.1;Parent=gene-LDO45_RS12260;Dbxref=GenBank:WP_223961827.1;Name=WP_223961827.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725173.1;locus_tag=LDO45_RS12260;product=YihY/virulence factor BrkB family protein;protein_id=WP_223961827.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 45681 46844 . + . ID=gene-LDO45_RS12265;Name=LDO45_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12265;old_locus_tag=BDI4_210071 NZ_CAJZAS010000124.1 Protein Homology CDS 45681 46844 . + 0 ID=cds-WP_223961828.1;Parent=gene-LDO45_RS12265;Dbxref=GenBank:WP_223961828.1;Name=WP_223961828.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217283.1;locus_tag=LDO45_RS12265;product=porin;protein_id=WP_223961828.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 47315 47788 . + . ID=gene-LDO45_RS12270;Name=LDO45_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12270;old_locus_tag=BDI4_210072 NZ_CAJZAS010000124.1 Protein Homology CDS 47315 47788 . + 0 ID=cds-WP_059524785.1;Parent=gene-LDO45_RS12270;Dbxref=GenBank:WP_059524785.1;Name=WP_059524785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365709.1;locus_tag=LDO45_RS12270;product=VOC family protein;protein_id=WP_059524785.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 47928 48728 . - . ID=gene-LDO45_RS12275;Name=LDO45_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12275;old_locus_tag=BDI4_210073 NZ_CAJZAS010000124.1 Protein Homology CDS 47928 48728 . - 0 ID=cds-WP_223961829.1;Parent=gene-LDO45_RS12275;Dbxref=GenBank:WP_223961829.1;Name=WP_223961829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012355667.1;locus_tag=LDO45_RS12275;product=aminoglycoside adenylyltransferase family protein;protein_id=WP_223961829.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 48988 49437 . - . ID=gene-LDO45_RS12280;Name=LDO45_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12280;old_locus_tag=BDI4_210074 NZ_CAJZAS010000124.1 Protein Homology CDS 48988 49437 . - 0 ID=cds-WP_011548077.1;Parent=gene-LDO45_RS12280;Dbxref=GenBank:WP_011548077.1;Name=WP_011548077.1;Ontology_term=GO:0030261,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011400993.1;locus_tag=LDO45_RS12280;product=HU family DNA-binding protein;protein_id=WP_011548077.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 49706 50824 . + . ID=gene-LDO45_RS12285;Name=LDO45_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12285;old_locus_tag=BDI4_210075 NZ_CAJZAS010000124.1 Protein Homology CDS 49706 50824 . + 0 ID=cds-WP_223961830.1;Parent=gene-LDO45_RS12285;Dbxref=GenBank:WP_223961830.1;Name=WP_223961830.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365706.1;locus_tag=LDO45_RS12285;product=acyltransferase;protein_id=WP_223961830.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 51129 52016 . - . ID=gene-LDO45_RS12290;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=LDO45_RS12290;old_locus_tag=BDI4_210076 NZ_CAJZAS010000124.1 Protein Homology CDS 51129 52016 . - 0 ID=cds-WP_034179975.1;Parent=gene-LDO45_RS12290;Dbxref=GenBank:WP_034179975.1;Name=WP_034179975.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881778.1;locus_tag=LDO45_RS12290;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_034179975.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 52245 52388 . - . ID=gene-LDO45_RS12295;Name=LDO45_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12295;old_locus_tag=BDI4_210077 NZ_CAJZAS010000124.1 Protein Homology CDS 52245 52388 . - 0 ID=cds-WP_006479318.1;Parent=gene-LDO45_RS12295;Dbxref=GenBank:WP_006479318.1;Name=WP_006479318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329973.1;locus_tag=LDO45_RS12295;product=hypothetical protein;protein_id=WP_006479318.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 52602 53777 . + . ID=gene-LDO45_RS12300;Name=LDO45_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12300;old_locus_tag=BDI4_210078 NZ_CAJZAS010000124.1 Protein Homology CDS 52602 53777 . + 0 ID=cds-WP_223961831.1;Parent=gene-LDO45_RS12300;Dbxref=GenBank:WP_223961831.1;Name=WP_223961831.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548080.1;locus_tag=LDO45_RS12300;product=acyltransferase;protein_id=WP_223961831.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 53984 56449 . - . ID=gene-LDO45_RS12305;Name=LDO45_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12305;old_locus_tag=BDI4_210079 NZ_CAJZAS010000124.1 Protein Homology CDS 53984 56449 . - 0 ID=cds-WP_223961832.1;Parent=gene-LDO45_RS12305;Dbxref=GenBank:WP_223961832.1;Name=WP_223961832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217287.1;locus_tag=LDO45_RS12305;product=glycosyltransferase family 4 protein;protein_id=WP_223961832.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 56446 57912 . - . ID=gene-LDO45_RS12310;Name=LDO45_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12310;old_locus_tag=BDI4_210080 NZ_CAJZAS010000124.1 Protein Homology CDS 56446 57912 . - 0 ID=cds-WP_223961834.1;Parent=gene-LDO45_RS12310;Dbxref=GenBank:WP_223961834.1;Name=WP_223961834.1;Ontology_term=GO:0140327;gbkey=CDS;go_function=flippase activity|0140327||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365703.1;locus_tag=LDO45_RS12310;product=flippase;protein_id=WP_223961834.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 57956 60148 . - . ID=gene-LDO45_RS12315;Name=LDO45_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12315;old_locus_tag=BDI4_210082 NZ_CAJZAS010000124.1 Protein Homology CDS 57956 60148 . - 0 ID=cds-WP_223961906.1;Parent=gene-LDO45_RS12315;Dbxref=GenBank:WP_223961906.1;Name=WP_223961906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467866.1;locus_tag=LDO45_RS12315;product=hypothetical protein;protein_id=WP_223961906.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 60253 60456 . - . ID=gene-LDO45_RS12320;Name=LDO45_RS12320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12320 NZ_CAJZAS010000124.1 GeneMarkS-2+ CDS 60253 60456 . - 0 ID=cds-WP_223961836.1;Parent=gene-LDO45_RS12320;Dbxref=GenBank:WP_223961836.1;Name=WP_223961836.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS12320;product=hypothetical protein;protein_id=WP_223961836.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 60642 61706 . + . ID=gene-LDO45_RS12325;Name=LDO45_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12325;old_locus_tag=BDI4_210084 NZ_CAJZAS010000124.1 Protein Homology CDS 60642 61706 . + 0 ID=cds-WP_059699941.1;Parent=gene-LDO45_RS12325;Dbxref=GenBank:WP_059699941.1;Name=WP_059699941.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658393.1;locus_tag=LDO45_RS12325;product=acyltransferase;protein_id=WP_059699941.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 61742 62788 . + . ID=gene-LDO45_RS12330;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=LDO45_RS12330;old_locus_tag=BDI4_210083 NZ_CAJZAS010000124.1 Protein Homology CDS 61742 62788 . + 0 ID=cds-WP_059524769.1;Parent=gene-LDO45_RS12330;Dbxref=GenBank:WP_059524769.1;Name=WP_059524769.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028634.1;locus_tag=LDO45_RS12330;product=GDP-mannose 4%2C6-dehydratase;protein_id=WP_059524769.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 62775 63749 . + . ID=gene-LDO45_RS12335;Name=LDO45_RS12335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12335;old_locus_tag=BDI4_210085 NZ_CAJZAS010000124.1 Protein Homology CDS 62775 63749 . + 0 ID=cds-WP_223961837.1;Parent=gene-LDO45_RS12335;Dbxref=GenBank:WP_223961837.1;Name=WP_223961837.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881770.1;locus_tag=LDO45_RS12335;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_223961837.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 63846 65036 . - . ID=gene-LDO45_RS12340;Name=LDO45_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12340;old_locus_tag=BDI4_210086 NZ_CAJZAS010000124.1 Protein Homology CDS 63846 65036 . - 0 ID=cds-WP_059525647.1;Parent=gene-LDO45_RS12340;Dbxref=GenBank:WP_059525647.1;Name=WP_059525647.1;Ontology_term=GO:0019346,GO:0071268,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA,homocysteine biosynthetic process|0071268||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694679.1;locus_tag=LDO45_RS12340;product=O-succinylhomoserine sulfhydrylase;protein_id=WP_059525647.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 65295 66827 . - . ID=gene-LDO45_RS12345;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=LDO45_RS12345;old_locus_tag=BDI4_210087 NZ_CAJZAS010000124.1 Protein Homology CDS 65295 66827 . - 0 ID=cds-WP_059524765.1;Parent=gene-LDO45_RS12345;Dbxref=GenBank:WP_059524765.1;Name=WP_059524765.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004544727.1;locus_tag=LDO45_RS12345;product=amidophosphoribosyltransferase;protein_id=WP_059524765.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 66879 67373 . - . ID=gene-LDO45_RS12350;Name=LDO45_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12350;old_locus_tag=BDI4_210088 NZ_CAJZAS010000124.1 Protein Homology CDS 66879 67373 . - 0 ID=cds-WP_059524763.1;Parent=gene-LDO45_RS12350;Dbxref=GenBank:WP_059524763.1;Name=WP_059524763.1;Ontology_term=GO:0009403;gbkey=CDS;go_process=toxin biosynthetic process|0009403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188369.1;locus_tag=LDO45_RS12350;product=CvpA family protein;protein_id=WP_059524763.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 67380 68201 . - . ID=gene-LDO45_RS12355;Name=LDO45_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12355;old_locus_tag=BDI4_210089 NZ_CAJZAS010000124.1 Protein Homology CDS 67380 68201 . - 0 ID=cds-WP_223961839.1;Parent=gene-LDO45_RS12355;Dbxref=GenBank:WP_223961839.1;Name=WP_223961839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009977970.1;locus_tag=LDO45_RS12355;product=SPOR domain-containing protein;protein_id=WP_223961839.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 68231 69541 . - . ID=gene-LDO45_RS12360;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=LDO45_RS12360;old_locus_tag=BDI4_210090 NZ_CAJZAS010000124.1 Protein Homology CDS 68231 69541 . - 0 ID=cds-WP_059524759.1;Parent=gene-LDO45_RS12360;Dbxref=GenBank:WP_059524759.1;Name=WP_059524759.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089192.1;locus_tag=LDO45_RS12360;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_059524759.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 69642 70514 . - . ID=gene-LDO45_RS12365;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=LDO45_RS12365;old_locus_tag=BDI4_210091 NZ_CAJZAS010000124.1 Protein Homology CDS 69642 70514 . - 0 ID=cds-WP_044843820.1;Parent=gene-LDO45_RS12365;Dbxref=GenBank:WP_044843820.1;Name=WP_044843820.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012403665.1;locus_tag=LDO45_RS12365;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_044843820.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 70579 71397 . - . ID=gene-LDO45_RS12370;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=LDO45_RS12370;old_locus_tag=BDI4_210092 NZ_CAJZAS010000124.1 Protein Homology CDS 70579 71397 . - 0 ID=cds-WP_059524757.1;Parent=gene-LDO45_RS12370;Dbxref=GenBank:WP_059524757.1;Name=WP_059524757.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881763.1;locus_tag=LDO45_RS12370;product=tryptophan synthase subunit alpha;protein_id=WP_059524757.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 71439 72290 . - . ID=gene-LDO45_RS12375;Name=LDO45_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12375;old_locus_tag=BDI4_210093 NZ_CAJZAS010000124.1 Protein Homology CDS 71439 72290 . - 0 ID=cds-WP_223961840.1;Parent=gene-LDO45_RS12375;Dbxref=GenBank:WP_223961840.1;Name=WP_223961840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329989.1;locus_tag=LDO45_RS12375;product=site-specific DNA-methyltransferase;protein_id=WP_223961840.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 72300 73493 . - . ID=gene-LDO45_RS12380;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=LDO45_RS12380;old_locus_tag=BDI4_210094 NZ_CAJZAS010000124.1 Protein Homology CDS 72300 73493 . - 0 ID=cds-WP_059524753.1;Parent=gene-LDO45_RS12380;Dbxref=GenBank:WP_059524753.1;Name=WP_059524753.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329990.1;locus_tag=LDO45_RS12380;product=tryptophan synthase subunit beta;protein_id=WP_059524753.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 73549 74250 . - . ID=gene-LDO45_RS12385;Name=LDO45_RS12385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12385;old_locus_tag=BDI4_210095 NZ_CAJZAS010000124.1 Protein Homology CDS 73549 74250 . - 0 ID=cds-WP_059689700.1;Parent=gene-LDO45_RS12385;Dbxref=GenBank:WP_059689700.1;Name=WP_059689700.1;Ontology_term=GO:0000162,GO:0004640;gbkey=CDS;go_function=phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493214.1;locus_tag=LDO45_RS12385;product=phosphoribosylanthranilate isomerase;protein_id=WP_059689700.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 74247 75059 . - . ID=gene-LDO45_RS12390;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=LDO45_RS12390;old_locus_tag=BDI4_210096 NZ_CAJZAS010000124.1 Protein Homology CDS 74247 75059 . - 0 ID=cds-WP_223961841.1;Parent=gene-LDO45_RS12390;Dbxref=GenBank:WP_223961841.1;Name=WP_223961841.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399585.1;locus_tag=LDO45_RS12390;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_223961841.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 75059 77074 . - . ID=gene-LDO45_RS12395;Name=LDO45_RS12395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12395;old_locus_tag=BDI4_210097 NZ_CAJZAS010000124.1 Protein Homology CDS 75059 77074 . - 0 ID=cds-WP_223961842.1;Parent=gene-LDO45_RS12395;Dbxref=GenBank:WP_223961842.1;Name=WP_223961842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548094.1;locus_tag=LDO45_RS12395;product=FimV/HubP family polar landmark protein;protein_id=WP_223961842.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 77585 78706 . - . ID=gene-LDO45_RS12400;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=LDO45_RS12400;old_locus_tag=BDI4_210098 NZ_CAJZAS010000124.1 Protein Homology CDS 77585 78706 . - 0 ID=cds-WP_059466419.1;Parent=gene-LDO45_RS12400;Dbxref=GenBank:WP_059466419.1;Name=WP_059466419.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338485.1;locus_tag=LDO45_RS12400;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_059466419.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 78789 78908 . - . ID=gene-LDO45_RS12405;Name=LDO45_RS12405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12405 NZ_CAJZAS010000124.1 Protein Homology CDS 78789 78908 . - 0 ID=cds-WP_039319027.1;Parent=gene-LDO45_RS12405;Dbxref=GenBank:WP_039319027.1;Name=WP_039319027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329997.1;locus_tag=LDO45_RS12405;product=hypothetical protein;protein_id=WP_039319027.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 79027 80094 . - . ID=gene-LDO45_RS12410;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=LDO45_RS12410;old_locus_tag=BDI4_210099 NZ_CAJZAS010000124.1 Protein Homology CDS 79027 80094 . - 0 ID=cds-WP_059524744.1;Parent=gene-LDO45_RS12410;Dbxref=GenBank:WP_059524744.1;Name=WP_059524744.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725192.1;locus_tag=LDO45_RS12410;product=3-isopropylmalate dehydrogenase;protein_id=WP_059524744.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 80170 80820 . - . ID=gene-LDO45_RS12415;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=LDO45_RS12415;old_locus_tag=BDI4_210100 NZ_CAJZAS010000124.1 Protein Homology CDS 80170 80820 . - 0 ID=cds-WP_059524742.1;Parent=gene-LDO45_RS12415;Dbxref=GenBank:WP_059524742.1;Name=WP_059524742.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008354049.1;locus_tag=LDO45_RS12415;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_059524742.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 80886 81032 . - . ID=gene-LDO45_RS12420;Name=LDO45_RS12420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12420;old_locus_tag=BDI4_210101 NZ_CAJZAS010000124.1 Protein Homology CDS 80886 81032 . - 0 ID=cds-WP_059450800.1;Parent=gene-LDO45_RS12420;Dbxref=GenBank:WP_059450800.1;Name=WP_059450800.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399579.1;locus_tag=LDO45_RS12420;product=entericidin A/B family lipoprotein;protein_id=WP_059450800.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 81036 82445 . - . ID=gene-LDO45_RS12425;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=LDO45_RS12425;old_locus_tag=BDI4_210102 NZ_CAJZAS010000124.1 Protein Homology CDS 81036 82445 . - 0 ID=cds-WP_057923944.1;Parent=gene-LDO45_RS12425;Dbxref=GenBank:WP_057923944.1;Name=WP_057923944.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690586.1;locus_tag=LDO45_RS12425;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_057923944.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 82720 83052 . + . ID=gene-LDO45_RS12430;Name=LDO45_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12430;old_locus_tag=BDI4_210103 NZ_CAJZAS010000124.1 Protein Homology CDS 82720 83052 . + 0 ID=cds-WP_223961843.1;Parent=gene-LDO45_RS12430;Dbxref=GenBank:WP_223961843.1;Name=WP_223961843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658362.1;locus_tag=LDO45_RS12430;product=cupin domain-containing protein;protein_id=WP_223961843.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 83180 83905 . + . ID=gene-LDO45_RS12435;Name=LDO45_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12435;old_locus_tag=BDI4_210104 NZ_CAJZAS010000124.1 Protein Homology CDS 83180 83905 . + 0 ID=cds-WP_223961844.1;Parent=gene-LDO45_RS12435;Dbxref=GenBank:WP_223961844.1;Name=WP_223961844.1;Ontology_term=GO:0006749,GO:0043295;gbkey=CDS;go_function=glutathione binding|0043295||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754093.1;locus_tag=LDO45_RS12435;product=glutathione S-transferase;protein_id=WP_223961844.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 83920 85617 . - . ID=gene-LDO45_RS12440;Name=LDO45_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12440;old_locus_tag=BDI4_210105 NZ_CAJZAS010000124.1 Protein Homology CDS 83920 85617 . - 0 ID=cds-WP_059524738.1;Parent=gene-LDO45_RS12440;Dbxref=GenBank:WP_059524738.1;Name=WP_059524738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881730.1;locus_tag=LDO45_RS12440;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_059524738.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 85657 86139 . - . ID=gene-LDO45_RS12445;Name=LDO45_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12445;old_locus_tag=BDI4_210106 NZ_CAJZAS010000124.1 Protein Homology CDS 85657 86139 . - 0 ID=cds-WP_223961845.1;Parent=gene-LDO45_RS12445;Dbxref=GenBank:WP_223961845.1;Name=WP_223961845.1;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881729.1;locus_tag=LDO45_RS12445;product=aromatic-ring-hydroxylating dioxygenase subunit beta;protein_id=WP_223961845.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 86117 87463 . - . ID=gene-LDO45_RS12450;Name=LDO45_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12450;old_locus_tag=BDI4_210107 NZ_CAJZAS010000124.1 Protein Homology CDS 86117 87463 . - 0 ID=cds-WP_223961847.1;Parent=gene-LDO45_RS12450;Dbxref=GenBank:WP_223961847.1;Name=WP_223961847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881728.1;locus_tag=LDO45_RS12450;product=aromatic ring-hydroxylating dioxygenase subunit alpha;protein_id=WP_223961847.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 87620 88018 . - . ID=gene-LDO45_RS12455;Name=LDO45_RS12455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12455;old_locus_tag=BDI4_210108 NZ_CAJZAS010000124.1 Protein Homology CDS 87620 88018 . - 0 ID=cds-WP_223961849.1;Parent=gene-LDO45_RS12455;Dbxref=GenBank:WP_223961849.1;Name=WP_223961849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881727.1;locus_tag=LDO45_RS12455;product=DUF4440 domain-containing protein;protein_id=WP_223961849.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 88027 89409 . - . ID=gene-LDO45_RS12460;Name=LDO45_RS12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12460;old_locus_tag=BDI4_210109 NZ_CAJZAS010000124.1 Protein Homology CDS 88027 89409 . - 0 ID=cds-WP_223961850.1;Parent=gene-LDO45_RS12460;Dbxref=GenBank:WP_223961850.1;Name=WP_223961850.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881726.1;locus_tag=LDO45_RS12460;product=MFS transporter;protein_id=WP_223961850.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 89548 90453 . + . ID=gene-LDO45_RS12465;Name=LDO45_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12465;old_locus_tag=BDI4_210110 NZ_CAJZAS010000124.1 Protein Homology CDS 89548 90453 . + 0 ID=cds-WP_124628505.1;Parent=gene-LDO45_RS12465;Dbxref=GenBank:WP_124628505.1;Name=WP_124628505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881725.1;locus_tag=LDO45_RS12465;product=LysR family transcriptional regulator;protein_id=WP_124628505.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 90486 91907 . - . ID=gene-LDO45_RS12470;Name=iaaH;gbkey=Gene;gene=iaaH;gene_biotype=protein_coding;locus_tag=LDO45_RS12470;old_locus_tag=BDI4_210111 NZ_CAJZAS010000124.1 Protein Homology CDS 90486 91907 . - 0 ID=cds-WP_223961852.1;Parent=gene-LDO45_RS12470;Dbxref=GenBank:WP_223961852.1;Name=WP_223961852.1;gbkey=CDS;gene=iaaH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881724.1;locus_tag=LDO45_RS12470;product=indoleacetamide hydrolase;protein_id=WP_223961852.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 92015 93547 . - . ID=gene-LDO45_RS12475;Name=LDO45_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12475;old_locus_tag=BDI4_210112 NZ_CAJZAS010000124.1 Protein Homology CDS 92015 93547 . - 0 ID=cds-WP_223961854.1;Parent=gene-LDO45_RS12475;Dbxref=GenBank:WP_223961854.1;Name=WP_223961854.1;Ontology_term=GO:0003333,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899961.1;locus_tag=LDO45_RS12475;product=amino acid permease;protein_id=WP_223961854.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 93687 94151 . - . ID=gene-LDO45_RS12480;Name=LDO45_RS12480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12480;old_locus_tag=BDI4_210113 NZ_CAJZAS010000124.1 Protein Homology CDS 93687 94151 . - 0 ID=cds-WP_059524722.1;Parent=gene-LDO45_RS12480;Dbxref=GenBank:WP_059524722.1;Name=WP_059524722.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355736.1;locus_tag=LDO45_RS12480;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_059524722.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 94253 95011 . - . ID=gene-LDO45_RS12485;Name=LDO45_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12485;old_locus_tag=BDI4_210114 NZ_CAJZAS010000124.1 Protein Homology CDS 94253 95011 . - 0 ID=cds-WP_059525643.1;Parent=gene-LDO45_RS12485;Dbxref=GenBank:WP_059525643.1;Name=WP_059525643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399555.1;locus_tag=LDO45_RS12485;product=dimethylarginine dimethylaminohydrolase family protein;protein_id=WP_059525643.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 95244 96497 . - . ID=gene-LDO45_RS12490;Name=LDO45_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12490;old_locus_tag=BDI4_210115 NZ_CAJZAS010000124.1 Protein Homology CDS 95244 96497 . - 0 ID=cds-WP_223961855.1;Parent=gene-LDO45_RS12490;Dbxref=GenBank:WP_223961855.1;Name=WP_223961855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754097.1;locus_tag=LDO45_RS12490;product=DUF1479 domain-containing protein;protein_id=WP_223961855.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 96610 96999 . - . ID=gene-LDO45_RS12495;Name=LDO45_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12495;old_locus_tag=BDI4_210116 NZ_CAJZAS010000124.1 Protein Homology CDS 96610 96999 . - 0 ID=cds-WP_223961856.1;Parent=gene-LDO45_RS12495;Dbxref=GenBank:WP_223961856.1;Name=WP_223961856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355739.1;locus_tag=LDO45_RS12495;product=VOC family protein;protein_id=WP_223961856.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 97071 98039 . + . ID=gene-LDO45_RS12500;Name=LDO45_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12500;old_locus_tag=BDI4_210117 NZ_CAJZAS010000124.1 Protein Homology CDS 97071 98039 . + 0 ID=cds-WP_059525641.1;Parent=gene-LDO45_RS12500;Dbxref=GenBank:WP_059525641.1;Name=WP_059525641.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355740.1;locus_tag=LDO45_RS12500;product=AraC family transcriptional regulator;protein_id=WP_059525641.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 98130 99431 . - . ID=gene-LDO45_RS12505;Name=gltA;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=LDO45_RS12505;old_locus_tag=BDI4_210118 NZ_CAJZAS010000124.1 Protein Homology CDS 98130 99431 . - 0 ID=cds-WP_011881720.1;Parent=gene-LDO45_RS12505;Dbxref=GenBank:WP_011881720.1;Name=WP_011881720.1;Ontology_term=GO:0006099,GO:0004108,GO:0005737;gbkey=CDS;gene=gltA;go_component=cytoplasm|0005737||IEA;go_function=citrate (Si)-synthase activity|0004108||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188362.1;locus_tag=LDO45_RS12505;product=citrate synthase;protein_id=WP_011881720.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 99485 99757 . - . ID=gene-LDO45_RS12510;Name=LDO45_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12510;old_locus_tag=BDI4_210119 NZ_CAJZAS010000124.1 Protein Homology CDS 99485 99757 . - 0 ID=cds-WP_059450790.1;Parent=gene-LDO45_RS12510;Dbxref=GenBank:WP_059450790.1;Name=WP_059450790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028609.1;locus_tag=LDO45_RS12510;product=succinate dehydrogenase assembly factor 2;protein_id=WP_059450790.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 99766 100467 . - . ID=gene-LDO45_RS12515;Name=LDO45_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12515;old_locus_tag=BDI4_210120 NZ_CAJZAS010000124.1 Protein Homology CDS 99766 100467 . - 0 ID=cds-WP_011658352.1;Parent=gene-LDO45_RS12515;Dbxref=GenBank:WP_011658352.1;Name=WP_011658352.1;Ontology_term=GO:0008177,GO:0046872;gbkey=CDS;go_function=succinate dehydrogenase (quinone) activity|0008177||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733632.1;locus_tag=LDO45_RS12515;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_011658352.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 100489 102264 . - . ID=gene-LDO45_RS12520;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=LDO45_RS12520;old_locus_tag=BDI4_210121 NZ_CAJZAS010000124.1 Protein Homology CDS 100489 102264 . - 0 ID=cds-WP_059524714.1;Parent=gene-LDO45_RS12520;Dbxref=GenBank:WP_059524714.1;Name=WP_059524714.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014193768.1;locus_tag=LDO45_RS12520;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_059524714.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 102268 102636 . - . ID=gene-LDO45_RS12525;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=LDO45_RS12525;old_locus_tag=BDI4_210122 NZ_CAJZAS010000124.1 Protein Homology CDS 102268 102636 . - 0 ID=cds-WP_006399546.1;Parent=gene-LDO45_RS12525;Dbxref=GenBank:WP_006399546.1;Name=WP_006399546.1;Ontology_term=GO:0006099,GO:0000104,GO:0020037,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhD;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,heme binding|0020037||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018439830.1;locus_tag=LDO45_RS12525;product=succinate dehydrogenase%2C hydrophobic membrane anchor protein;protein_id=WP_006399546.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 102641 103057 . - . ID=gene-LDO45_RS12530;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;locus_tag=LDO45_RS12530;old_locus_tag=BDI4_210123 NZ_CAJZAS010000124.1 Protein Homology CDS 102641 103057 . - 0 ID=cds-WP_059601793.1;Parent=gene-LDO45_RS12530;Dbxref=GenBank:WP_059601793.1;Name=WP_059601793.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0045273;gbkey=CDS;gene=sdhC;go_component=respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009895818.1;locus_tag=LDO45_RS12530;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=WP_059601793.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 103228 104052 . - . ID=gene-LDO45_RS12535;Name=LDO45_RS12535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12535;old_locus_tag=BDI4_210125 NZ_CAJZAS010000124.1 Protein Homology CDS 103228 104052 . - 0 ID=cds-WP_082721900.1;Parent=gene-LDO45_RS12535;Dbxref=GenBank:WP_082721900.1;Name=WP_082721900.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196014.1;locus_tag=LDO45_RS12535;product=GntR family transcriptional regulator;protein_id=WP_082721900.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 104341 105327 . + . ID=gene-LDO45_RS12540;Name=LDO45_RS12540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12540;old_locus_tag=BDI4_210126 NZ_CAJZAS010000124.1 Protein Homology CDS 104341 105327 . + 0 ID=cds-WP_044843799.1;Parent=gene-LDO45_RS12540;Dbxref=GenBank:WP_044843799.1;Name=WP_044843799.1;Ontology_term=GO:0006108,GO:0016615;gbkey=CDS;go_function=malate dehydrogenase activity|0016615||IEA;go_process=malate metabolic process|0006108||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754984.1;locus_tag=LDO45_RS12540;product=malate dehydrogenase;protein_id=WP_044843799.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 105512 106516 . + . ID=gene-LDO45_RS12545;Name=LDO45_RS12545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12545;old_locus_tag=BDI4_210127 NZ_CAJZAS010000124.1 Protein Homology CDS 105512 106516 . + 0 ID=cds-WP_223961857.1;Parent=gene-LDO45_RS12545;Dbxref=GenBank:WP_223961857.1;Name=WP_223961857.1;Ontology_term=GO:0016829,GO:0046872;gbkey=CDS;go_function=lyase activity|0016829||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658349.1;locus_tag=LDO45_RS12545;product=CoA ester lyase;protein_id=WP_223961857.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 106740 107249 . + . ID=gene-LDO45_RS12550;Name=LDO45_RS12550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12550;old_locus_tag=BDI4_210128 NZ_CAJZAS010000124.1 Protein Homology CDS 106740 107249 . + 0 ID=cds-WP_059524708.1;Parent=gene-LDO45_RS12550;Dbxref=GenBank:WP_059524708.1;Name=WP_059524708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724726.1;locus_tag=LDO45_RS12550;product=hypothetical protein;protein_id=WP_059524708.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 107282 108733 . + . ID=gene-LDO45_RS12555;Name=LDO45_RS12555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12555;old_locus_tag=BDI4_210129 NZ_CAJZAS010000124.1 Protein Homology CDS 107282 108733 . + 0 ID=cds-WP_059699912.1;Parent=gene-LDO45_RS12555;Dbxref=GenBank:WP_059699912.1;Name=WP_059699912.1;Ontology_term=GO:0019679,GO:0047547,GO:0051537;gbkey=CDS;go_function=2-methylcitrate dehydratase activity|0047547||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487726.1;locus_tag=LDO45_RS12555;product=bifunctional 2-methylcitrate dehydratase/aconitate hydratase;protein_id=WP_059699912.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 108779 111496 . + . ID=gene-LDO45_RS12560;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=LDO45_RS12560;old_locus_tag=BDI4_210130 NZ_CAJZAS010000124.1 Protein Homology CDS 108779 111496 . + 0 ID=cds-WP_223961858.1;Parent=gene-LDO45_RS12560;Dbxref=GenBank:WP_223961858.1;Name=WP_223961858.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012428654.1;locus_tag=LDO45_RS12560;product=aconitate hydratase AcnA;protein_id=WP_223961858.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 111616 112044 . - . ID=gene-LDO45_RS12565;Name=LDO45_RS12565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12565;old_locus_tag=BDI4_210131 NZ_CAJZAS010000124.1 Protein Homology CDS 111616 112044 . - 0 ID=cds-WP_223961859.1;Parent=gene-LDO45_RS12565;Dbxref=GenBank:WP_223961859.1;Name=WP_223961859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487774.1;locus_tag=LDO45_RS12565;product=DUF1801 domain-containing protein;protein_id=WP_223961859.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 112041 112472 . - . ID=gene-LDO45_RS12570;Name=LDO45_RS12570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12570;old_locus_tag=BDI4_210132 NZ_CAJZAS010000124.1 Protein Homology CDS 112041 112472 . - 0 ID=cds-WP_223961860.1;Parent=gene-LDO45_RS12570;Dbxref=GenBank:WP_223961860.1;Name=WP_223961860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756696.1;locus_tag=LDO45_RS12570;product=SRPBCC domain-containing protein;protein_id=WP_223961860.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 112469 112792 . - . ID=gene-LDO45_RS12575;Name=LDO45_RS12575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12575;old_locus_tag=BDI4_210133 NZ_CAJZAS010000124.1 Protein Homology CDS 112469 112792 . - 0 ID=cds-WP_059524698.1;Parent=gene-LDO45_RS12575;Dbxref=GenBank:WP_059524698.1;Name=WP_059524698.1;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899976.1;locus_tag=LDO45_RS12575;product=helix-turn-helix transcriptional regulator;protein_id=WP_059524698.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 113493 115232 . + . ID=gene-LDO45_RS12580;Name=LDO45_RS12580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12580;old_locus_tag=BDI4_210135 NZ_CAJZAS010000124.1 Protein Homology CDS 113493 115232 . + 0 ID=cds-WP_059818785.1;Parent=gene-LDO45_RS12580;Dbxref=GenBank:WP_059818785.1;Name=WP_059818785.1;Ontology_term=GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399530.1;locus_tag=LDO45_RS12580;product=protease pro-enzyme activation domain-containing protein;protein_id=WP_059818785.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 115315 116742 . - . ID=gene-LDO45_RS12585;Name=LDO45_RS12585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12585;old_locus_tag=BDI4_210136 NZ_CAJZAS010000124.1 Protein Homology CDS 115315 116742 . - 0 ID=cds-WP_223961861.1;Parent=gene-LDO45_RS12585;Dbxref=GenBank:WP_223961861.1;Name=WP_223961861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487759.1;locus_tag=LDO45_RS12585;product=MFS transporter;protein_id=WP_223961861.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 116984 117820 . - . ID=gene-LDO45_RS12590;Name=LDO45_RS12590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12590;old_locus_tag=BDI4_210137 NZ_CAJZAS010000124.1 Protein Homology CDS 116984 117820 . - 0 ID=cds-WP_059525632.1;Parent=gene-LDO45_RS12590;Dbxref=GenBank:WP_059525632.1;Name=WP_059525632.1;Ontology_term=GO:0055085,GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0005886,GO:0055052;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217864.1;locus_tag=LDO45_RS12590;product=ABC transporter permease;protein_id=WP_059525632.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 117858 119114 . - . ID=gene-LDO45_RS12595;Name=LDO45_RS12595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12595;old_locus_tag=BDI4_210138 NZ_CAJZAS010000124.1 Protein Homology CDS 117858 119114 . - 0 ID=cds-WP_059525635.1;Parent=gene-LDO45_RS12595;Dbxref=GenBank:WP_059525635.1;Name=WP_059525635.1;Ontology_term=GO:0055085,GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0005886,GO:0055052;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196172.1;locus_tag=LDO45_RS12595;product=ABC transporter permease;protein_id=WP_059525635.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 119217 120263 . - . ID=gene-LDO45_RS12600;Name=LDO45_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12600;old_locus_tag=BDI4_210139 NZ_CAJZAS010000124.1 Protein Homology CDS 119217 120263 . - 0 ID=cds-WP_059689660.1;Parent=gene-LDO45_RS12600;Dbxref=GenBank:WP_059689660.1;Name=WP_059689660.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753702.1;locus_tag=LDO45_RS12600;product=ABC transporter substrate-binding protein;protein_id=WP_059689660.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 120342 121433 . - . ID=gene-LDO45_RS12605;Name=LDO45_RS12605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12605;old_locus_tag=BDI4_210140 NZ_CAJZAS010000124.1 Protein Homology CDS 120342 121433 . - 0 ID=cds-WP_059524691.1;Parent=gene-LDO45_RS12605;Dbxref=GenBank:WP_059524691.1;Name=WP_059524691.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479371.1;locus_tag=LDO45_RS12605;product=ABC transporter ATP-binding protein;protein_id=WP_059524691.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 121541 123064 . + . ID=gene-LDO45_RS12610;Name=LDO45_RS12610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12610;old_locus_tag=BDI4_210141 NZ_CAJZAS010000124.1 Protein Homology CDS 121541 123064 . + 0 ID=cds-WP_223961863.1;Parent=gene-LDO45_RS12610;Dbxref=GenBank:WP_223961863.1;Name=WP_223961863.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495971.1;locus_tag=LDO45_RS12610;product=PLP-dependent aminotransferase family protein;protein_id=WP_223961863.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 123074 124108 . - . ID=gene-LDO45_RS12615;Name=LDO45_RS12615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12615;old_locus_tag=BDI4_210142 NZ_CAJZAS010000124.1 Protein Homology CDS 123074 124108 . - 0 ID=cds-WP_223961865.1;Parent=gene-LDO45_RS12615;Dbxref=GenBank:WP_223961865.1;Name=WP_223961865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365663.1;locus_tag=LDO45_RS12615;product=lipase secretion chaperone;protein_id=WP_223961865.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 124112 125206 . - . ID=gene-LDO45_RS12620;Name=LDO45_RS12620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12620;old_locus_tag=BDI4_210143 NZ_CAJZAS010000124.1 Protein Homology CDS 124112 125206 . - 0 ID=cds-WP_223961866.1;Parent=gene-LDO45_RS12620;Dbxref=GenBank:WP_223961866.1;Name=WP_223961866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756711.1;locus_tag=LDO45_RS12620;product=triacylglycerol lipase;protein_id=WP_223961866.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 125443 127575 . - . ID=gene-LDO45_RS12625;Name=LDO45_RS12625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12625;old_locus_tag=BDI4_210144 NZ_CAJZAS010000124.1 Protein Homology CDS 125443 127575 . - 0 ID=cds-WP_223961867.1;Parent=gene-LDO45_RS12625;Dbxref=GenBank:WP_223961867.1;Name=WP_223961867.1;Ontology_term=GO:0006825,GO:0005375,GO:0005507,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=copper ion transmembrane transporter activity|0005375||IEA,copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548120.1;locus_tag=LDO45_RS12625;product=TonB-dependent copper receptor;protein_id=WP_223961867.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 127659 128027 . - . ID=gene-LDO45_RS12630;Name=LDO45_RS12630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12630;old_locus_tag=BDI4_210145 NZ_CAJZAS010000124.1 Protein Homology CDS 127659 128027 . - 0 ID=cds-WP_059689652.1;Parent=gene-LDO45_RS12630;Dbxref=GenBank:WP_059689652.1;Name=WP_059689652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548121.1;locus_tag=LDO45_RS12630;product=DUF2946 domain-containing protein;protein_id=WP_059689652.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 128184 128720 . - . ID=gene-LDO45_RS12635;Name=LDO45_RS12635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12635;old_locus_tag=BDI4_210146 NZ_CAJZAS010000124.1 Protein Homology CDS 128184 128720 . - 0 ID=cds-WP_059689650.1;Parent=gene-LDO45_RS12635;Dbxref=GenBank:WP_059689650.1;Name=WP_059689650.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483770.1;locus_tag=LDO45_RS12635;product=cytochrome b;protein_id=WP_059689650.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 128955 129593 . + . ID=gene-LDO45_RS12640;Name=LDO45_RS12640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12640;old_locus_tag=BDI4_210147 NZ_CAJZAS010000124.1 Protein Homology CDS 128955 129593 . + 0 ID=cds-WP_059525630.1;Parent=gene-LDO45_RS12640;Dbxref=GenBank:WP_059525630.1;Name=WP_059525630.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404060.1;locus_tag=LDO45_RS12640;product=Pr6Pr family membrane protein;protein_id=WP_059525630.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 129642 130376 . - . ID=gene-LDO45_RS12645;Name=LDO45_RS12645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12645;old_locus_tag=BDI4_210148 NZ_CAJZAS010000124.1 Protein Homology CDS 129642 130376 . - 0 ID=cds-WP_223961868.1;Parent=gene-LDO45_RS12645;Dbxref=GenBank:WP_223961868.1;Name=WP_223961868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495975.1;locus_tag=LDO45_RS12645;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_223961868.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 130804 131124 . + . ID=gene-LDO45_RS12650;Name=LDO45_RS12650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12650;old_locus_tag=BDI4_210150 NZ_CAJZAS010000124.1 Protein Homology CDS 130804 131124 . + 0 ID=cds-WP_006760526.1;Parent=gene-LDO45_RS12650;Dbxref=GenBank:WP_006760526.1;Name=WP_006760526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760526.1;locus_tag=LDO45_RS12650;product=hypothetical protein;protein_id=WP_006760526.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 131240 131584 . - . ID=gene-LDO45_RS12655;Name=LDO45_RS12655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12655;old_locus_tag=BDI4_210151 NZ_CAJZAS010000124.1 Protein Homology CDS 131240 131584 . - 0 ID=cds-WP_059699901.1;Parent=gene-LDO45_RS12655;Dbxref=GenBank:WP_059699901.1;Name=WP_059699901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399511.1;locus_tag=LDO45_RS12655;product=DUF4148 domain-containing protein;protein_id=WP_059699901.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 131785 133197 . - . ID=gene-LDO45_RS12660;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=LDO45_RS12660;old_locus_tag=BDI4_210152 NZ_CAJZAS010000124.1 Protein Homology CDS 131785 133197 . - 0 ID=cds-WP_059524672.1;Parent=gene-LDO45_RS12660;Dbxref=GenBank:WP_059524672.1;Name=WP_059524672.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899993.1;locus_tag=LDO45_RS12660;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_059524672.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 133295 133936 . - . ID=gene-LDO45_RS12665;Name=LDO45_RS12665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12665;old_locus_tag=BDI4_210153 NZ_CAJZAS010000124.1 Protein Homology CDS 133295 133936 . - 0 ID=cds-WP_059524670.1;Parent=gene-LDO45_RS12665;Dbxref=GenBank:WP_059524670.1;Name=WP_059524670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495978.1;locus_tag=LDO45_RS12665;product=DUF938 domain-containing protein;protein_id=WP_059524670.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 133933 134829 . - . ID=gene-LDO45_RS12670;Name=LDO45_RS12670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12670;old_locus_tag=BDI4_210154 NZ_CAJZAS010000124.1 Protein Homology CDS 133933 134829 . - 0 ID=cds-WP_223961869.1;Parent=gene-LDO45_RS12670;Dbxref=GenBank:WP_223961869.1;Name=WP_223961869.1;Ontology_term=GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658326.1;locus_tag=LDO45_RS12670;product=NAD-dependent protein deacetylase;protein_id=WP_223961869.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 135986 136945 . + . ID=gene-LDO45_RS12675;Name=LDO45_RS12675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12675;old_locus_tag=BDI4_210155 NZ_CAJZAS010000124.1 Protein Homology CDS 135986 136945 . + 0 ID=cds-WP_223961870.1;Parent=gene-LDO45_RS12675;Dbxref=GenBank:WP_223961870.1;Name=WP_223961870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495981.1;locus_tag=LDO45_RS12675;product=LLM class oxidoreductase;protein_id=WP_223961870.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 137234 139681 . + . ID=gene-LDO45_RS12680;Name=LDO45_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12680;old_locus_tag=BDI4_210156 NZ_CAJZAS010000124.1 Protein Homology CDS 137234 139681 . + 0 ID=cds-WP_223961871.1;Parent=gene-LDO45_RS12680;Dbxref=GenBank:WP_223961871.1;Name=WP_223961871.1;Ontology_term=GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899997.1;locus_tag=LDO45_RS12680;product=mechanosensitive ion channel family protein;protein_id=WP_223961871.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 140051 140212 . - . ID=gene-LDO45_RS12685;Name=LDO45_RS12685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12685 NZ_CAJZAS010000124.1 GeneMarkS-2+ CDS 140051 140212 . - 0 ID=cds-WP_156437121.1;Parent=gene-LDO45_RS12685;Dbxref=GenBank:WP_156437121.1;Name=WP_156437121.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS12685;product=hypothetical protein;protein_id=WP_156437121.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 140541 142376 . + . ID=gene-LDO45_RS12690;Name=LDO45_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12690;old_locus_tag=BDI4_210158 NZ_CAJZAS010000124.1 Protein Homology CDS 140541 142376 . + 0 ID=cds-WP_223961873.1;Parent=gene-LDO45_RS12690;Dbxref=GenBank:WP_223961873.1;Name=WP_223961873.1;Ontology_term=GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489048.1;locus_tag=LDO45_RS12690;product=protease pro-enzyme activation domain-containing protein;protein_id=WP_223961873.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 142521 144071 . - . ID=gene-LDO45_RS12695;Name=LDO45_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12695;old_locus_tag=BDI4_210159 NZ_CAJZAS010000124.1 Protein Homology CDS 142521 144071 . - 0 ID=cds-WP_223961875.1;Parent=gene-LDO45_RS12695;Dbxref=GenBank:WP_223961875.1;Name=WP_223961875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365645.1;locus_tag=LDO45_RS12695;product=phospholipase D family protein;protein_id=WP_223961875.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 144385 144463 . - . ID=gene-LDO45_RS12700;Name=LDO45_RS12700;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS12700;old_locus_tag=BDI4_TRNA45 NZ_CAJZAS010000124.1 tRNAscan-SE tRNA 144385 144463 . - . ID=rna-LDO45_RS12700;Parent=gene-LDO45_RS12700;anticodon=(pos:complement(144425..144427));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS12700;product=tRNA-Ile NZ_CAJZAS010000124.1 tRNAscan-SE exon 144385 144463 . - . ID=exon-LDO45_RS12700-1;Parent=rna-LDO45_RS12700;anticodon=(pos:complement(144425..144427));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS12700;product=tRNA-Ile NZ_CAJZAS010000124.1 RefSeq gene 144602 147019 . - . ID=gene-LDO45_RS12705;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=LDO45_RS12705;old_locus_tag=BDI4_210160 NZ_CAJZAS010000124.1 Protein Homology CDS 144602 147019 . - 0 ID=cds-WP_082721897.1;Parent=gene-LDO45_RS12705;Dbxref=GenBank:WP_082721897.1;Name=WP_082721897.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658300.1;locus_tag=LDO45_RS12705;product=RNA polymerase sigma factor RpoD;protein_id=WP_082721897.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 147108 148985 . - . ID=gene-LDO45_RS12710;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=LDO45_RS12710;old_locus_tag=BDI4_210161 NZ_CAJZAS010000124.1 Protein Homology CDS 147108 148985 . - 0 ID=cds-WP_223961877.1;Parent=gene-LDO45_RS12710;Dbxref=GenBank:WP_223961877.1;Name=WP_223961877.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765502.1;locus_tag=LDO45_RS12710;product=DNA primase;protein_id=WP_223961877.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 149058 149504 . - . ID=gene-LDO45_RS12715;Name=LDO45_RS12715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12715;old_locus_tag=BDI4_210162 NZ_CAJZAS010000124.1 Protein Homology CDS 149058 149504 . - 0 ID=cds-WP_059524656.1;Parent=gene-LDO45_RS12715;Dbxref=GenBank:WP_059524656.1;Name=WP_059524656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900012.1;locus_tag=LDO45_RS12715;product=GatB/YqeY domain-containing protein;protein_id=WP_059524656.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 149690 149902 . - . ID=gene-LDO45_RS12720;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=LDO45_RS12720;old_locus_tag=BDI4_210163 NZ_CAJZAS010000124.1 Protein Homology CDS 149690 149902 . - 0 ID=cds-WP_006479415.1;Parent=gene-LDO45_RS12720;Dbxref=GenBank:WP_006479415.1;Name=WP_006479415.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011903537.1;locus_tag=LDO45_RS12720;product=30S ribosomal protein S21;protein_id=WP_006479415.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 150009 151229 . - . ID=gene-LDO45_RS12725;Name=LDO45_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12725;old_locus_tag=BDI4_210164 NZ_CAJZAS010000124.1 Protein Homology CDS 150009 151229 . - 0 ID=cds-WP_059689630.1;Parent=gene-LDO45_RS12725;Dbxref=GenBank:WP_059689630.1;Name=WP_059689630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496002.1;locus_tag=LDO45_RS12725;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_059689630.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 151360 152400 . + . ID=gene-LDO45_RS12730;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=LDO45_RS12730;old_locus_tag=BDI4_210165 NZ_CAJZAS010000124.1 Protein Homology CDS 151360 152400 . + 0 ID=cds-WP_059531475.1;Parent=gene-LDO45_RS12730;Dbxref=GenBank:WP_059531475.1;Name=WP_059531475.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027813.1;locus_tag=LDO45_RS12730;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_059531475.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 152509 153318 . - . ID=gene-LDO45_RS12735;Name=folE2;gbkey=Gene;gene=folE2;gene_biotype=protein_coding;locus_tag=LDO45_RS12735;old_locus_tag=BDI4_210166 NZ_CAJZAS010000124.1 Protein Homology CDS 152509 153318 . - 0 ID=cds-WP_059819618.1;Parent=gene-LDO45_RS12735;Dbxref=GenBank:WP_059819618.1;Name=WP_059819618.1;Ontology_term=GO:0003933;gbkey=CDS;gene=folE2;go_function=GTP cyclohydrolase activity|0003933||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760425.1;locus_tag=LDO45_RS12735;product=GTP cyclohydrolase FolE2;protein_id=WP_059819618.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 153473 155377 . - . ID=gene-LDO45_RS12740;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=LDO45_RS12740;old_locus_tag=BDI4_210167 NZ_CAJZAS010000124.1 Protein Homology CDS 153473 155377 . - 0 ID=cds-WP_223961880.1;Parent=gene-LDO45_RS12740;Dbxref=GenBank:WP_223961880.1;Name=WP_223961880.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338492.1;locus_tag=LDO45_RS12740;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_223961880.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 155458 156342 . - . ID=gene-LDO45_RS12745;Name=LDO45_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12745;old_locus_tag=BDI4_210168 NZ_CAJZAS010000124.1 Protein Homology CDS 155458 156342 . - 0 ID=cds-WP_059531483.1;Parent=gene-LDO45_RS12745;Dbxref=GenBank:WP_059531483.1;Name=WP_059531483.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486453.1;locus_tag=LDO45_RS12745;product=polyprenyl synthetase family protein;protein_id=WP_059531483.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 156339 156632 . - . ID=gene-LDO45_RS12750;Name=LDO45_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12750;old_locus_tag=BDI4_210169 NZ_CAJZAS010000124.1 Protein Homology CDS 156339 156632 . - 0 ID=cds-WP_006479428.1;Parent=gene-LDO45_RS12750;Dbxref=GenBank:WP_006479428.1;Name=WP_006479428.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399451.1;locus_tag=LDO45_RS12750;product=exodeoxyribonuclease VII small subunit;protein_id=WP_006479428.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 156904 158010 . + . ID=gene-LDO45_RS12755;Name=LDO45_RS12755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12755;old_locus_tag=BDI4_210170 NZ_CAJZAS010000124.1 Protein Homology CDS 156904 158010 . + 0 ID=cds-WP_059689628.1;Parent=gene-LDO45_RS12755;Dbxref=GenBank:WP_059689628.1;Name=WP_059689628.1;Ontology_term=GO:0016491,GO:0051537;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027818.1;locus_tag=LDO45_RS12755;product=aromatic ring-hydroxylating dioxygenase subunit alpha;protein_id=WP_059689628.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 158126 158995 . + . ID=gene-LDO45_RS12760;Name=LDO45_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12760;old_locus_tag=BDI4_210171 NZ_CAJZAS010000124.1 Protein Homology CDS 158126 158995 . + 0 ID=cds-WP_223961882.1;Parent=gene-LDO45_RS12760;Dbxref=GenBank:WP_223961882.1;Name=WP_223961882.1;Ontology_term=GO:0016783;gbkey=CDS;go_function=sulfurtransferase activity|0016783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529026.1;locus_tag=LDO45_RS12760;product=sulfurtransferase;protein_id=WP_223961882.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 159048 159923 . - . ID=gene-LDO45_RS12765;Name=LDO45_RS12765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12765;old_locus_tag=BDI4_210172 NZ_CAJZAS010000124.1 Protein Homology CDS 159048 159923 . - 0 ID=cds-WP_223961884.1;Parent=gene-LDO45_RS12765;Dbxref=GenBank:WP_223961884.1;Name=WP_223961884.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414604.1;locus_tag=LDO45_RS12765;product=dienelactone hydrolase family protein;protein_id=WP_223961884.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 160335 161669 . - . ID=gene-LDO45_RS12770;Name=LDO45_RS12770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12770;old_locus_tag=BDI4_210173 NZ_CAJZAS010000124.1 Protein Homology CDS 160335 161669 . - 0 ID=cds-WP_059531493.1;Parent=gene-LDO45_RS12770;Dbxref=GenBank:WP_059531493.1;Name=WP_059531493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190401.1;locus_tag=LDO45_RS12770;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_059531493.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 161949 164702 . - . ID=gene-LDO45_RS12775;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=LDO45_RS12775;old_locus_tag=BDI4_210174 NZ_CAJZAS010000124.1 Protein Homology CDS 161949 164702 . - 0 ID=cds-WP_223961886.1;Parent=gene-LDO45_RS12775;Dbxref=GenBank:WP_223961886.1;Name=WP_223961886.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761695.1;locus_tag=LDO45_RS12775;product=DNA polymerase I;protein_id=WP_223961886.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 164704 165462 . + . ID=gene-LDO45_RS12780;Name=LDO45_RS12780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12780;old_locus_tag=BDI4_210175 NZ_CAJZAS010000124.1 Protein Homology CDS 164704 165462 . + 0 ID=cds-WP_059531499.1;Parent=gene-LDO45_RS12780;Dbxref=GenBank:WP_059531499.1;Name=WP_059531499.1;Ontology_term=GO:0009691,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881579.1;locus_tag=LDO45_RS12780;product=TIGR00730 family Rossman fold protein;protein_id=WP_059531499.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 165852 166142 . + . ID=gene-LDO45_RS12785;Name=LDO45_RS12785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12785;old_locus_tag=BDI4_210176 NZ_CAJZAS010000124.1 Protein Homology CDS 165852 166142 . + 0 ID=cds-WP_059531502.1;Parent=gene-LDO45_RS12785;Dbxref=GenBank:WP_059531502.1;Name=WP_059531502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900025.1;locus_tag=LDO45_RS12785;product=hypothetical protein;protein_id=WP_059531502.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 166262 167788 . - . ID=gene-LDO45_RS12790;Name=LDO45_RS12790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12790;old_locus_tag=BDI4_210178 NZ_CAJZAS010000124.1 Protein Homology CDS 166262 167788 . - 0 ID=cds-WP_059690185.1;Parent=gene-LDO45_RS12790;Dbxref=GenBank:WP_059690185.1;Name=WP_059690185.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529041.1;locus_tag=LDO45_RS12790;product=AMP nucleosidase;protein_id=WP_059690185.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 167929 168336 . + . ID=gene-LDO45_RS12795;Name=LDO45_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12795;old_locus_tag=BDI4_210179 NZ_CAJZAS010000124.1 Protein Homology CDS 167929 168336 . + 0 ID=cds-WP_223961888.1;Parent=gene-LDO45_RS12795;Dbxref=GenBank:WP_223961888.1;Name=WP_223961888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010110125.1;locus_tag=LDO45_RS12795;product=hypothetical protein;protein_id=WP_223961888.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 168444 169442 . + . ID=gene-LDO45_RS12800;Name=LDO45_RS12800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12800;old_locus_tag=BDI4_210180 NZ_CAJZAS010000124.1 Protein Homology CDS 168444 169442 . + 0 ID=cds-WP_223961890.1;Parent=gene-LDO45_RS12800;Dbxref=GenBank:WP_223961890.1;Name=WP_223961890.1;Ontology_term=GO:0009088,GO:0004413;gbkey=CDS;go_function=homoserine kinase activity|0004413||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254414.1;locus_tag=LDO45_RS12800;product=homoserine kinase;protein_id=WP_223961890.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 169433 170242 . + . ID=gene-LDO45_RS12805;Name=LDO45_RS12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12805;old_locus_tag=BDI4_210181 NZ_CAJZAS010000124.1 Protein Homology CDS 169433 170242 . + 0 ID=cds-WP_059531507.1;Parent=gene-LDO45_RS12805;Dbxref=GenBank:WP_059531507.1;Name=WP_059531507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496010.1;locus_tag=LDO45_RS12805;product=BPSS1780 family membrane protein;protein_id=WP_059531507.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 170420 170872 . + . ID=gene-LDO45_RS12810;Name=LDO45_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12810;old_locus_tag=BDI4_210182 NZ_CAJZAS010000124.1 Protein Homology CDS 170420 170872 . + 0 ID=cds-WP_223961891.1;Parent=gene-LDO45_RS12810;Dbxref=GenBank:WP_223961891.1;Name=WP_223961891.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761239.1;locus_tag=LDO45_RS12810;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_223961891.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 171028 171447 . + . ID=gene-LDO45_RS12815;Name=LDO45_RS12815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12815;old_locus_tag=BDI4_210183 NZ_CAJZAS010000124.1 Protein Homology CDS 171028 171447 . + 0 ID=cds-WP_223961893.1;Parent=gene-LDO45_RS12815;Dbxref=GenBank:WP_223961893.1;Name=WP_223961893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900033.1;locus_tag=LDO45_RS12815;product=organic hydroperoxide resistance protein;protein_id=WP_223961893.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 171556 171732 . - . ID=gene-LDO45_RS12820;Name=LDO45_RS12820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12820;old_locus_tag=BDI4_210184 NZ_CAJZAS010000124.1 Protein Homology CDS 171556 171732 . - 0 ID=cds-WP_006753395.1;Parent=gene-LDO45_RS12820;Dbxref=GenBank:WP_006753395.1;Name=WP_006753395.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330147.1;locus_tag=LDO45_RS12820;product=DUF3563 family protein;protein_id=WP_006753395.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 171814 172923 . - . ID=gene-LDO45_RS12825;Name=LDO45_RS12825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12825;old_locus_tag=BDI4_210185 NZ_CAJZAS010000124.1 Protein Homology CDS 171814 172923 . - 0 ID=cds-WP_059689613.1;Parent=gene-LDO45_RS12825;Dbxref=GenBank:WP_059689613.1;Name=WP_059689613.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658279.1;locus_tag=LDO45_RS12825;product=PHB depolymerase family esterase;protein_id=WP_059689613.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 173173 173871 . + . ID=gene-LDO45_RS12830;Name=LDO45_RS12830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12830;old_locus_tag=BDI4_210186 NZ_CAJZAS010000124.1 Protein Homology CDS 173173 173871 . + 0 ID=cds-WP_059531515.1;Parent=gene-LDO45_RS12830;Dbxref=GenBank:WP_059531515.1;Name=WP_059531515.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010110140.1;locus_tag=LDO45_RS12830;product=phosphatase PAP2 family protein;protein_id=WP_059531515.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 174012 174809 . + . ID=gene-LDO45_RS12835;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=LDO45_RS12835;old_locus_tag=BDI4_210187 NZ_CAJZAS010000124.1 Protein Homology CDS 174012 174809 . + 0 ID=cds-WP_223961895.1;Parent=gene-LDO45_RS12835;Dbxref=GenBank:WP_223961895.1;Name=WP_223961895.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753392.1;locus_tag=LDO45_RS12835;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_223961895.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 174820 175497 . + . ID=gene-LDO45_RS12840;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=LDO45_RS12840;old_locus_tag=BDI4_210188 NZ_CAJZAS010000124.1 Protein Homology CDS 174820 175497 . + 0 ID=cds-WP_223961907.1;Parent=gene-LDO45_RS12840;Dbxref=GenBank:WP_223961907.1;Name=WP_223961907.1;Ontology_term=GO:0015689,GO:0015412,GO:0005886,GO:0055052;gbkey=CDS;gene=modB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479455.1;locus_tag=LDO45_RS12840;product=molybdate ABC transporter permease subunit;protein_id=WP_223961907.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 175604 176305 . + . ID=gene-LDO45_RS12845;Name=LDO45_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12845;old_locus_tag=BDI4_210189 NZ_CAJZAS010000124.1 Protein Homology CDS 175604 176305 . + 0 ID=cds-WP_059818759.1;Parent=gene-LDO45_RS12845;Dbxref=GenBank:WP_059818759.1;Name=WP_059818759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486467.1;locus_tag=LDO45_RS12845;product=sulfate/molybdate ABC transporter ATP-binding protein;protein_id=WP_059818759.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 176479 177324 . - . ID=gene-LDO45_RS12850;Name=LDO45_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12850;old_locus_tag=BDI4_210190 NZ_CAJZAS010000124.1 Protein Homology CDS 176479 177324 . - 0 ID=cds-WP_059531524.1;Parent=gene-LDO45_RS12850;Dbxref=GenBank:WP_059531524.1;Name=WP_059531524.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365619.1;locus_tag=LDO45_RS12850;product=TOBE domain-containing protein;protein_id=WP_059531524.1;transl_table=11 NZ_CAJZAS010000124.1 RefSeq gene 177373 178379 . - . ID=gene-LDO45_RS12855;Name=LDO45_RS12855;end_range=178379,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12855;old_locus_tag=BDI4_210191;partial=true NZ_CAJZAS010000124.1 Protein Homology CDS 177373 178379 . - 2 ID=cds-WP_223961897.1;Parent=gene-LDO45_RS12855;Dbxref=GenBank:WP_223961897.1;Name=WP_223961897.1;end_range=178379,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761231.1;locus_tag=LDO45_RS12855;partial=true;product=CHAD domain-containing protein;protein_id=WP_223961897.1;transl_table=11 ##sequence-region NZ_CAJZAS010000125.1 1 992 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000125.1 RefSeq region 1 992 . + . ID=NZ_CAJZAS010000125.1:1..992;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_210 NZ_CAJZAS010000125.1 RefSeq pseudogene 1 992 . + . ID=gene-LDO45_RS12860;Name=LDO45_RS12860;end_range=992,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS12860;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000125.1 Protein Homology CDS 1 992 . + 1 ID=cds-LDO45_RS12860;Parent=gene-LDO45_RS12860;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing N-terminus and C-terminus;Ontology_term=GO:0035438;end_range=992,.;gbkey=CDS;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498997.1;locus_tag=LDO45_RS12860;partial=true;product=PilZ domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAS010000126.1 1 6051 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000126.1 RefSeq region 1 6051 . + . ID=NZ_CAJZAS010000126.1:1..6051;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_211 NZ_CAJZAS010000126.1 RefSeq pseudogene 1 461 . + . ID=gene-LDO45_RS12865;Name=LDO45_RS12865;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS12865;old_locus_tag=BDI4_2110002;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000126.1 Protein Homology CDS 1 461 . + 2 ID=cds-LDO45_RS12865;Parent=gene-LDO45_RS12865;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492409.1;locus_tag=LDO45_RS12865;partial=true;product=endoribonuclease L-PSP;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000126.1 RefSeq gene 572 1378 . + . ID=gene-LDO45_RS12870;Name=LDO45_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12870;old_locus_tag=BDI4_2110001 NZ_CAJZAS010000126.1 Protein Homology CDS 572 1378 . + 0 ID=cds-WP_223961912.1;Parent=gene-LDO45_RS12870;Dbxref=GenBank:WP_223961912.1;Name=WP_223961912.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657923.1;locus_tag=LDO45_RS12870;product=glycosyltransferase family 2 protein;protein_id=WP_223961912.1;transl_table=11 NZ_CAJZAS010000126.1 RefSeq gene 1529 2290 . + . ID=gene-LDO45_RS12875;Name=LDO45_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12875;old_locus_tag=BDI4_2110003 NZ_CAJZAS010000126.1 Protein Homology CDS 1529 2290 . + 0 ID=cds-WP_059528256.1;Parent=gene-LDO45_RS12875;Dbxref=GenBank:WP_059528256.1;Name=WP_059528256.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477817.1;locus_tag=LDO45_RS12875;product=M48 family metalloprotease;protein_id=WP_059528256.1;transl_table=11 NZ_CAJZAS010000126.1 RefSeq gene 2405 4105 . - . ID=gene-LDO45_RS12880;Name=LDO45_RS12880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12880;old_locus_tag=BDI4_2110004 NZ_CAJZAS010000126.1 Protein Homology CDS 2405 4105 . - 0 ID=cds-WP_059690666.1;Parent=gene-LDO45_RS12880;Dbxref=GenBank:WP_059690666.1;Name=WP_059690666.1;Ontology_term=GO:0015718,GO:0008028,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=monocarboxylic acid transmembrane transporter activity|0008028||IEA;go_process=monocarboxylic acid transport|0015718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761804.1;locus_tag=LDO45_RS12880;product=lactate permease LctP family transporter;protein_id=WP_059690666.1;transl_table=11 NZ_CAJZAS010000126.1 RefSeq gene 4157 5602 . - . ID=gene-LDO45_RS12885;Name=LDO45_RS12885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12885;old_locus_tag=BDI4_2110005 NZ_CAJZAS010000126.1 Protein Homology CDS 4157 5602 . - 0 ID=cds-WP_223961914.1;Parent=gene-LDO45_RS12885;Dbxref=GenBank:WP_223961914.1;Name=WP_223961914.1;Ontology_term=GO:0019516,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=lactate oxidation|0019516||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886021.1;locus_tag=LDO45_RS12885;product=LutB/LldF family L-lactate oxidation iron-sulfur protein;protein_id=WP_223961914.1;transl_table=11 NZ_CAJZAS010000126.1 RefSeq pseudogene 5599 6051 . - . ID=gene-LDO45_RS12890;Name=LDO45_RS12890;end_range=6051,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS12890;partial=true;pseudo=true NZ_CAJZAS010000126.1 Protein Homology CDS 5599 6051 . - 1 ID=cds-LDO45_RS12890;Parent=gene-LDO45_RS12890;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing N-terminus;end_range=6051,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364706.1;locus_tag=LDO45_RS12890;partial=true;product=lactate utilization protein C;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000127.1 1 1607 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000127.1 RefSeq region 1 1607 . + . ID=NZ_CAJZAS010000127.1:1..1607;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_212 NZ_CAJZAS010000127.1 RefSeq pseudogene 81 1607 . - . ID=gene-LDO45_RS12895;Name=LDO45_RS12895;end_range=1607,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS12895;old_locus_tag=BDI4_2120002;partial=true;pseudo=true NZ_CAJZAS010000127.1 Protein Homology CDS 81 1607 . - 2 ID=cds-LDO45_RS12895;Parent=gene-LDO45_RS12895;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing N-terminus;Ontology_term=GO:0003824;end_range=1607,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476046.1;locus_tag=LDO45_RS12895;partial=true;product=condensation domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000128.1 1 521 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000128.1 RefSeq region 1 521 . + . ID=NZ_CAJZAS010000128.1:1..521;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_213 NZ_CAJZAS010000128.1 RefSeq pseudogene 1 521 . - . ID=gene-LDO45_RS12900;Name=LDO45_RS12900;end_range=521,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS12900;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000128.1 Protein Homology CDS 1 521 . - 1 ID=cds-LDO45_RS12900;Parent=gene-LDO45_RS12900;Note=too many ambiguous residues%3B incomplete%3B missing N-terminus and C-terminus;end_range=521,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013225.5;locus_tag=LDO45_RS12900;partial=true;product=carboxyl transferase domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAS010000129.1 1 6125 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000129.1 RefSeq region 1 6125 . + . ID=NZ_CAJZAS010000129.1:1..6125;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_214 NZ_CAJZAS010000129.1 RefSeq gene 31 855 . - . ID=gene-LDO45_RS12905;Name=LDO45_RS12905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12905;old_locus_tag=BDI4_2140001 NZ_CAJZAS010000129.1 Protein Homology CDS 31 855 . - 0 ID=cds-WP_059698466.1;Parent=gene-LDO45_RS12905;Dbxref=GenBank:WP_059698466.1;Name=WP_059698466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026946.1;locus_tag=LDO45_RS12905;product=outer membrane protein assembly factor BamD;protein_id=WP_059698466.1;transl_table=11 NZ_CAJZAS010000129.1 RefSeq gene 897 2105 . + . ID=gene-LDO45_RS12910;Name=LDO45_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12910;old_locus_tag=BDI4_2140002 NZ_CAJZAS010000129.1 Protein Homology CDS 897 2105 . + 0 ID=cds-WP_059693216.1;Parent=gene-LDO45_RS12910;Dbxref=GenBank:WP_059693216.1;Name=WP_059693216.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896926.1;locus_tag=LDO45_RS12910;product=RluA family pseudouridine synthase;protein_id=WP_059693216.1;transl_table=11 NZ_CAJZAS010000129.1 RefSeq gene 2112 2951 . + . ID=gene-LDO45_RS12915;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=protein_coding;locus_tag=LDO45_RS12915;old_locus_tag=BDI4_2140003 NZ_CAJZAS010000129.1 Protein Homology CDS 2112 2951 . + 0 ID=cds-WP_223961916.1;Parent=gene-LDO45_RS12915;Dbxref=GenBank:WP_223961916.1;Name=WP_223961916.1;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004544445.1;locus_tag=LDO45_RS12915;product=peptidoglycan editing factor PgeF;protein_id=WP_223961916.1;transl_table=11 NZ_CAJZAS010000129.1 RefSeq gene 3321 5195 . + . ID=gene-LDO45_RS12920;Name=phaC;gbkey=Gene;gene=phaC;gene_biotype=protein_coding;locus_tag=LDO45_RS12920;old_locus_tag=BDI4_2140005 NZ_CAJZAS010000129.1 Protein Homology CDS 3321 5195 . + 0 ID=cds-WP_223961918.1;Parent=gene-LDO45_RS12920;Dbxref=GenBank:WP_223961918.1;Name=WP_223961918.1;Ontology_term=GO:0042619,GO:0016746,GO:0005737;gbkey=CDS;gene=phaC;go_component=cytoplasm|0005737||IEA;go_function=acyltransferase activity|0016746||IEA;go_process=poly-hydroxybutyrate biosynthetic process|0042619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549702.1;locus_tag=LDO45_RS12920;product=class I poly(R)-hydroxyalkanoic acid synthase;protein_id=WP_223961918.1;transl_table=11 NZ_CAJZAS010000129.1 RefSeq gene 5295 6125 . + . ID=gene-LDO45_RS12925;Name=LDO45_RS12925;end_range=6125,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12925;partial=true NZ_CAJZAS010000129.1 Protein Homology CDS 5295 6125 . + 0 ID=cds-WP_223961920.1;Parent=gene-LDO45_RS12925;Dbxref=GenBank:WP_223961920.1;Name=WP_223961920.1;Ontology_term=GO:0006631,GO:0003985;end_range=6125,.;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485256.1;locus_tag=LDO45_RS12925;partial=true;product=acetyl-CoA C-acyltransferase;protein_id=WP_223961920.1;transl_table=11 ##sequence-region NZ_CAJZAS010000130.1 1 2326 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000130.1 RefSeq region 1 2326 . + . ID=NZ_CAJZAS010000130.1:1..2326;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_215 NZ_CAJZAS010000130.1 RefSeq gene 86 709 . - . ID=gene-LDO45_RS12930;Name=LDO45_RS12930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12930;old_locus_tag=BDI4_2150001 NZ_CAJZAS010000130.1 Protein Homology CDS 86 709 . - 0 ID=cds-WP_059532732.1;Parent=gene-LDO45_RS12930;Dbxref=GenBank:WP_059532732.1;Name=WP_059532732.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333684.1;locus_tag=LDO45_RS12930;product=HAD family hydrolase;protein_id=WP_059532732.1;transl_table=11 NZ_CAJZAS010000130.1 RefSeq gene 706 1257 . - . ID=gene-LDO45_RS12935;Name=LDO45_RS12935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12935;old_locus_tag=BDI4_2150002 NZ_CAJZAS010000130.1 Protein Homology CDS 706 1257 . - 0 ID=cds-WP_059532735.1;Parent=gene-LDO45_RS12935;Dbxref=GenBank:WP_059532735.1;Name=WP_059532735.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758496.1;locus_tag=LDO45_RS12935;product=cysteine hydrolase family protein;protein_id=WP_059532735.1;transl_table=11 NZ_CAJZAS010000130.1 RefSeq gene 1320 2326 . - . ID=gene-LDO45_RS12940;Name=LDO45_RS12940;end_range=2326,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12940;old_locus_tag=BDI4_2150003;partial=true NZ_CAJZAS010000130.1 Protein Homology CDS 1320 2326 . - 2 ID=cds-WP_223961922.1;Parent=gene-LDO45_RS12940;Dbxref=GenBank:WP_223961922.1;Name=WP_223961922.1;end_range=2326,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106698.1;locus_tag=LDO45_RS12940;partial=true;product=M24B family metallopeptidase;protein_id=WP_223961922.1;transl_table=11 ##sequence-region NZ_CAJZAS010000131.1 1 678 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000131.1 RefSeq region 1 678 . + . ID=NZ_CAJZAS010000131.1:1..678;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_216 NZ_CAJZAS010000131.1 RefSeq pseudogene 90 490 . + . ID=gene-LDO45_RS12945;Name=LDO45_RS12945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS12945;pseudo=true NZ_CAJZAS010000131.1 Protein Homology CDS 90 490 . + 0 ID=cds-LDO45_RS12945;Parent=gene-LDO45_RS12945;Note=frameshifted%3B too many ambiguous residues;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329170.1;locus_tag=LDO45_RS12945;product=MarC family protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000132.1 1 622 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000132.1 RefSeq region 1 622 . + . ID=NZ_CAJZAS010000132.1:1..622;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_217 NZ_CAJZAS010000132.1 RefSeq gene 1 191 . + . ID=gene-LDO45_RS12950;Name=LDO45_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12950;old_locus_tag=BDI4_2170001;partial=true;start_range=.,1 NZ_CAJZAS010000132.1 Protein Homology CDS 1 191 . + 2 ID=cds-WP_290371017.1;Parent=gene-LDO45_RS12950;Dbxref=GenBank:WP_290371017.1;Name=WP_290371017.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722801.1;locus_tag=LDO45_RS12950;partial=true;product=phosphoribosyl-dephospho-CoA transferase MdcG domain-containing protein;protein_id=WP_290371017.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000132.1 RefSeq pseudogene 188 622 . + . ID=gene-LDO45_RS12955;Name=LDO45_RS12955;end_range=622,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS12955;old_locus_tag=BDI4_2170002;partial=true;pseudo=true NZ_CAJZAS010000132.1 Protein Homology CDS 188 622 . + 0 ID=cds-LDO45_RS12955;Parent=gene-LDO45_RS12955;Note=too many ambiguous residues%3B incomplete%3B missing C-terminus;Ontology_term=GO:0016310,GO:0005524,GO:0046917;end_range=622,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,triphosphoribosyl-dephospho-CoA synthase activity|0046917||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405102.1;locus_tag=LDO45_RS12955;partial=true;product=triphosphoribosyl-dephospho-CoA synthase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000133.1 1 2782 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000133.1 RefSeq region 1 2782 . + . ID=NZ_CAJZAS010000133.1:1..2782;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_218 NZ_CAJZAS010000133.1 RefSeq gene 1 205 . - . ID=gene-LDO45_RS12960;Name=LDO45_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12960;partial=true;start_range=.,1 NZ_CAJZAS010000133.1 Protein Homology CDS 1 205 . - 0 ID=cds-WP_223961924.1;Parent=gene-LDO45_RS12960;Dbxref=GenBank:WP_223961924.1;Name=WP_223961924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004555933.1;locus_tag=LDO45_RS12960;partial=true;product=hypothetical protein;protein_id=WP_223961924.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000133.1 RefSeq gene 391 879 . - . ID=gene-LDO45_RS12965;Name=LDO45_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12965;old_locus_tag=BDI4_2180002 NZ_CAJZAS010000133.1 Protein Homology CDS 391 879 . - 0 ID=cds-WP_223961926.1;Parent=gene-LDO45_RS12965;Dbxref=GenBank:WP_223961926.1;Name=WP_223961926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217901.1;locus_tag=LDO45_RS12965;product=phage protein NinX family protein;protein_id=WP_223961926.1;transl_table=11 NZ_CAJZAS010000133.1 RefSeq gene 1230 1997 . - . ID=gene-LDO45_RS12970;Name=LDO45_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12970;old_locus_tag=BDI4_2180003 NZ_CAJZAS010000133.1 Protein Homology CDS 1230 1997 . - 0 ID=cds-WP_223961928.1;Parent=gene-LDO45_RS12970;Dbxref=GenBank:WP_223961928.1;Name=WP_223961928.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758802.1;locus_tag=LDO45_RS12970;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_223961928.1;transl_table=11 NZ_CAJZAS010000133.1 RefSeq pseudogene 1988 2782 . - . ID=gene-LDO45_RS12975;Name=LDO45_RS12975;end_range=2782,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS12975;old_locus_tag=BDI4_2180004;partial=true;pseudo=true NZ_CAJZAS010000133.1 Protein Homology CDS 1988 2782 . - 1 ID=cds-LDO45_RS12975;Parent=gene-LDO45_RS12975;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0016020;end_range=2782,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417153.1;locus_tag=LDO45_RS12975;partial=true;product=TVP38/TMEM64 family protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000134.1 1 1217 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000134.1 RefSeq region 1 1217 . + . ID=NZ_CAJZAS010000134.1:1..1217;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_219 NZ_CAJZAS010000134.1 RefSeq gene 403 1217 . + . ID=gene-LDO45_RS12980;Name=acpA;end_range=1217,.;gbkey=Gene;gene=acpA;gene_biotype=protein_coding;locus_tag=LDO45_RS12980;partial=true;start_range=.,403 NZ_CAJZAS010000134.1 Protein Homology CDS 403 1217 . + 1 ID=cds-WP_374109534.1;Parent=gene-LDO45_RS12980;Dbxref=GenBank:WP_374109534.1;Name=WP_374109534.1;Ontology_term=GO:0003993;end_range=1217,.;gbkey=CDS;gene=acpA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602321.1;locus_tag=LDO45_RS12980;partial=true;product=acid phosphatase;protein_id=WP_374109534.1;start_range=.,403;transl_table=11 ##sequence-region NZ_CAJZAS010000135.1 1 23564 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000135.1 RefSeq region 1 23564 . + . ID=NZ_CAJZAS010000135.1:1..23564;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_22 NZ_CAJZAS010000135.1 RefSeq gene 1 296 . + . ID=gene-LDO45_RS12985;Name=LDO45_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12985;old_locus_tag=BDI4_220001;partial=true;start_range=.,1 NZ_CAJZAS010000135.1 GeneMarkS-2+ CDS 1 296 . + 2 ID=cds-WP_223961930.1;Parent=gene-LDO45_RS12985;Dbxref=GenBank:WP_223961930.1;Name=WP_223961930.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS12985;partial=true;product=cupin domain-containing protein;protein_id=WP_223961930.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 293 1504 . + . ID=gene-LDO45_RS12990;Name=LDO45_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12990;old_locus_tag=BDI4_220002 NZ_CAJZAS010000135.1 Protein Homology CDS 293 1504 . + 0 ID=cds-WP_223961933.1;Parent=gene-LDO45_RS12990;Dbxref=GenBank:WP_223961933.1;Name=WP_223961933.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013658.5;locus_tag=LDO45_RS12990;product=DUF3440 domain-containing protein;protein_id=WP_223961933.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 1569 2048 . + . ID=gene-LDO45_RS12995;Name=LDO45_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS12995;old_locus_tag=BDI4_220003 NZ_CAJZAS010000135.1 Protein Homology CDS 1569 2048 . + 0 ID=cds-WP_253074746.1;Parent=gene-LDO45_RS12995;Dbxref=GenBank:WP_253074746.1;Name=WP_253074746.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014273.5;locus_tag=LDO45_RS12995;product=ParB N-terminal domain-containing protein;protein_id=WP_253074746.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 2053 2736 . + . ID=gene-LDO45_RS13000;Name=LDO45_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13000;old_locus_tag=BDI4_220004 NZ_CAJZAS010000135.1 GeneMarkS-2+ CDS 2053 2736 . + 0 ID=cds-WP_223961935.1;Parent=gene-LDO45_RS13000;Dbxref=GenBank:WP_223961935.1;Name=WP_223961935.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS13000;product=hypothetical protein;protein_id=WP_223961935.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 2756 3097 . + . ID=gene-LDO45_RS13005;Name=LDO45_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13005;old_locus_tag=BDI4_220005 NZ_CAJZAS010000135.1 GeneMarkS-2+ CDS 2756 3097 . + 0 ID=cds-WP_223961937.1;Parent=gene-LDO45_RS13005;Dbxref=GenBank:WP_223961937.1;Name=WP_223961937.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS13005;product=hypothetical protein;protein_id=WP_223961937.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 3210 3662 . + . ID=gene-LDO45_RS13010;Name=LDO45_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13010;old_locus_tag=BDI4_220006 NZ_CAJZAS010000135.1 Protein Homology CDS 3210 3662 . + 0 ID=cds-WP_223961939.1;Parent=gene-LDO45_RS13010;Dbxref=GenBank:WP_223961939.1;Name=WP_223961939.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015205.5;locus_tag=LDO45_RS13010;product=antirestriction protein;protein_id=WP_223961939.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 3872 4432 . + . ID=gene-LDO45_RS13015;Name=LDO45_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13015;old_locus_tag=BDI4_220007 NZ_CAJZAS010000135.1 GeneMarkS-2+ CDS 3872 4432 . + 0 ID=cds-WP_223961941.1;Parent=gene-LDO45_RS13015;Dbxref=GenBank:WP_223961941.1;Name=WP_223961941.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS13015;product=hypothetical protein;protein_id=WP_223961941.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 4362 6473 . + . ID=gene-LDO45_RS13020;Name=LDO45_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13020;old_locus_tag=BDI4_220008 NZ_CAJZAS010000135.1 Protein Homology CDS 4362 6473 . + 0 ID=cds-WP_223961943.1;Parent=gene-LDO45_RS13020;Dbxref=GenBank:WP_223961943.1;Name=WP_223961943.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042573.3;locus_tag=LDO45_RS13020;product=phage terminase large subunit family protein;protein_id=WP_223961943.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 6476 6751 . + . ID=gene-LDO45_RS13025;Name=LDO45_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13025;old_locus_tag=BDI4_220009 NZ_CAJZAS010000135.1 Protein Homology CDS 6476 6751 . + 0 ID=cds-WP_223961945.1;Parent=gene-LDO45_RS13025;Dbxref=GenBank:WP_223961945.1;Name=WP_223961945.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014846.5;locus_tag=LDO45_RS13025;product=gpW family protein;protein_id=WP_223961945.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 6761 8458 . + . ID=gene-LDO45_RS13030;Name=LDO45_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13030;old_locus_tag=BDI4_220010 NZ_CAJZAS010000135.1 Protein Homology CDS 6761 8458 . + 0 ID=cds-WP_223961947.1;Parent=gene-LDO45_RS13030;Dbxref=GenBank:WP_223961947.1;Name=WP_223961947.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004626038.1;locus_tag=LDO45_RS13030;product=phage portal protein;protein_id=WP_223961947.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 8468 9328 . - . ID=gene-LDO45_RS13035;Name=LDO45_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13035;old_locus_tag=BDI4_220011 NZ_CAJZAS010000135.1 GeneMarkS-2+ CDS 8468 9328 . - 0 ID=cds-WP_223961949.1;Parent=gene-LDO45_RS13035;Dbxref=GenBank:WP_223961949.1;Name=WP_223961949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS13035;product=hypothetical protein;protein_id=WP_223961949.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 9461 10288 . + . ID=gene-LDO45_RS13040;Name=LDO45_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13040;old_locus_tag=BDI4_220013 NZ_CAJZAS010000135.1 Protein Homology CDS 9461 10288 . + 0 ID=cds-WP_223961951.1;Parent=gene-LDO45_RS13040;Dbxref=GenBank:WP_223961951.1;Name=WP_223961951.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004626040.1;locus_tag=LDO45_RS13040;product=S49 family peptidase;protein_id=WP_223961951.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 10275 10970 . + . ID=gene-LDO45_RS13045;Name=LDO45_RS13045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13045;old_locus_tag=BDI4_220014 NZ_CAJZAS010000135.1 GeneMarkS-2+ CDS 10275 10970 . + 0 ID=cds-WP_223961953.1;Parent=gene-LDO45_RS13045;Dbxref=GenBank:WP_223961953.1;Name=WP_223961953.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS13045;product=hypothetical protein;protein_id=WP_223961953.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 10986 11657 . + . ID=gene-LDO45_RS13050;Name=LDO45_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13050;old_locus_tag=BDI4_220015 NZ_CAJZAS010000135.1 Protein Homology CDS 10986 11657 . + 0 ID=cds-WP_223961955.1;Parent=gene-LDO45_RS13050;Dbxref=GenBank:WP_223961955.1;Name=WP_223961955.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014921.5;locus_tag=LDO45_RS13050;product=head decoration protein;protein_id=WP_223961955.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 11791 12085 . + . ID=gene-LDO45_RS13055;Name=LDO45_RS13055;end_range=12085,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13055;old_locus_tag=BDI4_220017;partial=true NZ_CAJZAS010000135.1 Protein Homology CDS 11791 12085 . + 0 ID=cds-WP_223961957.1;Parent=gene-LDO45_RS13055;Dbxref=GenBank:WP_223961957.1;Name=WP_223961957.1;end_range=12085,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015802.5;locus_tag=LDO45_RS13055;partial=true;product=major capsid protein;protein_id=WP_223961957.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 12499 13188 . + . ID=gene-LDO45_RS13060;Name=LDO45_RS13060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13060;old_locus_tag=BDI4_220019 NZ_CAJZAS010000135.1 GeneMarkS-2+ CDS 12499 13188 . + 0 ID=cds-WP_223961959.1;Parent=gene-LDO45_RS13060;Dbxref=GenBank:WP_223961959.1;Name=WP_223961959.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS13060;product=hypothetical protein;protein_id=WP_223961959.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 13224 13451 . + . ID=gene-LDO45_RS34560;Name=LDO45_RS34560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34560;old_locus_tag=BDI4_220020 NZ_CAJZAS010000135.1 Protein Homology CDS 13224 13451 . + 0 ID=cds-WP_223961960.1;Parent=gene-LDO45_RS34560;Dbxref=GenBank:WP_223961960.1;Name=WP_223961960.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022401.5;locus_tag=LDO45_RS34560;product=DUF2635 domain-containing protein;protein_id=WP_223961960.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 13553 14926 . + . ID=gene-LDO45_RS13070;Name=LDO45_RS13070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13070;old_locus_tag=BDI4_220021 NZ_CAJZAS010000135.1 Protein Homology CDS 13553 14926 . + 0 ID=cds-WP_223961961.1;Parent=gene-LDO45_RS13070;Dbxref=GenBank:WP_223961961.1;Name=WP_223961961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495256.1;locus_tag=LDO45_RS13070;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_223961961.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 14937 15311 . + . ID=gene-LDO45_RS13075;Name=LDO45_RS13075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13075;old_locus_tag=BDI4_220022 NZ_CAJZAS010000135.1 Protein Homology CDS 14937 15311 . + 0 ID=cds-WP_223961962.1;Parent=gene-LDO45_RS13075;Dbxref=GenBank:WP_223961962.1;Name=WP_223961962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495255.1;locus_tag=LDO45_RS13075;product=phage tail tube protein;protein_id=WP_223961962.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 15341 15601 . + . ID=gene-LDO45_RS13080;Name=LDO45_RS13080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13080;old_locus_tag=BDI4_220023 NZ_CAJZAS010000135.1 Protein Homology CDS 15341 15601 . + 0 ID=cds-WP_223961963.1;Parent=gene-LDO45_RS13080;Dbxref=GenBank:WP_223961963.1;Name=WP_223961963.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: protein motif:HMM:NF021614.5;locus_tag=LDO45_RS13080;product=phage tail assembly protein;protein_id=WP_223961963.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 15615 15737 . + . ID=gene-LDO45_RS34565;Name=LDO45_RS34565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34565;old_locus_tag=BDI4_220024 NZ_CAJZAS010000135.1 Protein Homology CDS 15615 15737 . + 0 ID=cds-WP_223961964.1;Parent=gene-LDO45_RS34565;Dbxref=GenBank:WP_223961964.1;Name=WP_223961964.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018260.5;locus_tag=LDO45_RS34565;product=hypothetical protein;protein_id=WP_223961964.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 15730 17754 . + . ID=gene-LDO45_RS13090;Name=LDO45_RS13090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13090;old_locus_tag=BDI4_220025 NZ_CAJZAS010000135.1 Protein Homology CDS 15730 17754 . + 0 ID=cds-WP_223961965.1;Parent=gene-LDO45_RS13090;Dbxref=GenBank:WP_223961965.1;Name=WP_223961965.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013618.5;locus_tag=LDO45_RS13090;product=transglycosylase SLT domain-containing protein;protein_id=WP_223961965.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 17751 19064 . + . ID=gene-LDO45_RS13095;Name=LDO45_RS13095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13095;old_locus_tag=BDI4_220026 NZ_CAJZAS010000135.1 Protein Homology CDS 17751 19064 . + 0 ID=cds-WP_223961966.1;Parent=gene-LDO45_RS13095;Dbxref=GenBank:WP_223961966.1;Name=WP_223961966.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018818.5;locus_tag=LDO45_RS13095;product=DNA circularization protein;protein_id=WP_223961966.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 19074 20135 . + . ID=gene-LDO45_RS13100;Name=LDO45_RS13100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13100;old_locus_tag=BDI4_220027 NZ_CAJZAS010000135.1 Protein Homology CDS 19074 20135 . + 0 ID=cds-WP_223961968.1;Parent=gene-LDO45_RS13100;Dbxref=GenBank:WP_223961968.1;Name=WP_223961968.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017739.5;locus_tag=LDO45_RS13100;product=phage baseplate assembly protein;protein_id=WP_223961968.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 20138 20725 . + . ID=gene-LDO45_RS13105;Name=LDO45_RS13105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13105;old_locus_tag=BDI4_220028 NZ_CAJZAS010000135.1 Protein Homology CDS 20138 20725 . + 0 ID=cds-WP_223961970.1;Parent=gene-LDO45_RS13105;Dbxref=GenBank:WP_223961970.1;Name=WP_223961970.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011487644.1;locus_tag=LDO45_RS13105;product=phage baseplate assembly protein V;protein_id=WP_223961970.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 20735 21175 . + . ID=gene-LDO45_RS13110;Name=LDO45_RS13110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13110;old_locus_tag=BDI4_220029 NZ_CAJZAS010000135.1 Protein Homology CDS 20735 21175 . + 0 ID=cds-WP_223961973.1;Parent=gene-LDO45_RS13110;Dbxref=GenBank:WP_223961973.1;Name=WP_223961973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011487645.1;locus_tag=LDO45_RS13110;product=phage GP46 family protein;protein_id=WP_223961973.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 21186 22298 . + . ID=gene-LDO45_RS13115;Name=LDO45_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13115;old_locus_tag=BDI4_220030 NZ_CAJZAS010000135.1 Protein Homology CDS 21186 22298 . + 0 ID=cds-WP_223961975.1;Parent=gene-LDO45_RS13115;Dbxref=GenBank:WP_223961975.1;Name=WP_223961975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683304.1;locus_tag=LDO45_RS13115;product=baseplate J/gp47 family protein;protein_id=WP_223961975.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq gene 22300 22917 . + . ID=gene-LDO45_RS13120;Name=LDO45_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13120;old_locus_tag=BDI4_220031 NZ_CAJZAS010000135.1 Protein Homology CDS 22300 22917 . + 0 ID=cds-WP_223961976.1;Parent=gene-LDO45_RS13120;Dbxref=GenBank:WP_223961976.1;Name=WP_223961976.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021583.5;locus_tag=LDO45_RS13120;product=YmfQ family protein;protein_id=WP_223961976.1;transl_table=11 NZ_CAJZAS010000135.1 RefSeq pseudogene 22921 23564 . + . ID=gene-LDO45_RS13125;Name=LDO45_RS13125;end_range=23564,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13125;partial=true;pseudo=true NZ_CAJZAS010000135.1 GeneMarkS-2+ CDS 22921 23564 . + 0 ID=cds-LDO45_RS13125;Parent=gene-LDO45_RS13125;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=23564,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS13125;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000136.1 1 6416 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000136.1 RefSeq region 1 6416 . + . ID=NZ_CAJZAS010000136.1:1..6416;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_220 NZ_CAJZAS010000136.1 RefSeq gene 143 1369 . + . ID=gene-LDO45_RS13135;Name=LDO45_RS13135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13135;old_locus_tag=BDI4_2200001 NZ_CAJZAS010000136.1 Protein Homology CDS 143 1369 . + 0 ID=cds-WP_223961978.1;Parent=gene-LDO45_RS13135;Dbxref=GenBank:WP_223961978.1;Name=WP_223961978.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694424.1;locus_tag=LDO45_RS13135;product=patatin-like phospholipase family protein;protein_id=WP_223961978.1;transl_table=11 NZ_CAJZAS010000136.1 RefSeq gene 1854 2732 . + . ID=gene-LDO45_RS13140;Name=LDO45_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13140;old_locus_tag=BDI4_2200002 NZ_CAJZAS010000136.1 Protein Homology CDS 1854 2732 . + 0 ID=cds-WP_059451551.1;Parent=gene-LDO45_RS13140;Dbxref=GenBank:WP_059451551.1;Name=WP_059451551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334373.1;locus_tag=LDO45_RS13140;product=ferritin;protein_id=WP_059451551.1;transl_table=11 NZ_CAJZAS010000136.1 RefSeq gene 2895 3380 . + . ID=gene-LDO45_RS13145;Name=rfaE2;gbkey=Gene;gene=rfaE2;gene_biotype=protein_coding;locus_tag=LDO45_RS13145;old_locus_tag=BDI4_2200003 NZ_CAJZAS010000136.1 Protein Homology CDS 2895 3380 . + 0 ID=cds-WP_059451616.1;Parent=gene-LDO45_RS13145;Dbxref=GenBank:WP_059451616.1;Name=WP_059451616.1;Ontology_term=GO:0005975,GO:0016773,GO:0016779;gbkey=CDS;gene=rfaE2;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329309.1;locus_tag=LDO45_RS13145;product=D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase;protein_id=WP_059451616.1;transl_table=11 NZ_CAJZAS010000136.1 RefSeq gene 3397 3639 . - . ID=gene-LDO45_RS13150;Name=LDO45_RS13150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13150;old_locus_tag=BDI4_2200004 NZ_CAJZAS010000136.1 Protein Homology CDS 3397 3639 . - 0 ID=cds-WP_059691412.1;Parent=gene-LDO45_RS13150;Dbxref=GenBank:WP_059691412.1;Name=WP_059691412.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546319.1;locus_tag=LDO45_RS13150;product=hypothetical protein;protein_id=WP_059691412.1;transl_table=11 NZ_CAJZAS010000136.1 RefSeq gene 3814 4602 . - . ID=gene-LDO45_RS13155;Name=LDO45_RS13155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13155;old_locus_tag=BDI4_2200005 NZ_CAJZAS010000136.1 Protein Homology CDS 3814 4602 . - 0 ID=cds-WP_059523989.1;Parent=gene-LDO45_RS13155;Dbxref=GenBank:WP_059523989.1;Name=WP_059523989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407082.1;locus_tag=LDO45_RS13155;product=type III pantothenate kinase;protein_id=WP_059523989.1;transl_table=11 NZ_CAJZAS010000136.1 RefSeq pseudogene 4599 5443 . - . ID=gene-LDO45_RS13160;Name=LDO45_RS13160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13160;pseudo=true NZ_CAJZAS010000136.1 Protein Homology CDS 4599 5443 . - 0 ID=cds-LDO45_RS13160;Parent=gene-LDO45_RS13160;Note=frameshifted%3B too many ambiguous residues;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353348.1;locus_tag=LDO45_RS13160;product=biotin--[acetyl-CoA-carboxylase] ligase;pseudo=true;transl_table=11 NZ_CAJZAS010000136.1 RefSeq pseudogene 5716 6416 . - . ID=gene-LDO45_RS13165;Name=LDO45_RS13165;end_range=6416,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13165;partial=true;pseudo=true NZ_CAJZAS010000136.1 Protein Homology CDS 5716 6416 . - 1 ID=cds-LDO45_RS13165;Parent=gene-LDO45_RS13165;Note=frameshifted%3B incomplete%3B missing N-terminus;Ontology_term=GO:0005515;end_range=6416,.;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196310.1;locus_tag=LDO45_RS13165;partial=true;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000137.1 1 3491 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000137.1 RefSeq region 1 3491 . + . ID=NZ_CAJZAS010000137.1:1..3491;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_221 NZ_CAJZAS010000137.1 RefSeq gene 1 1730 . - . ID=gene-LDO45_RS13170;Name=LDO45_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13170;partial=true;start_range=.,1 NZ_CAJZAS010000137.1 Protein Homology CDS 1 1730 . - 0 ID=cds-WP_223961979.1;Parent=gene-LDO45_RS13170;Dbxref=GenBank:WP_223961979.1;Name=WP_223961979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214274.1;locus_tag=LDO45_RS13170;partial=true;product=phosphodiesterase;protein_id=WP_223961979.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000137.1 RefSeq gene 1914 2957 . - . ID=gene-LDO45_RS13175;Name=LDO45_RS13175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13175;old_locus_tag=BDI4_2210002 NZ_CAJZAS010000137.1 Protein Homology CDS 1914 2957 . - 0 ID=cds-WP_059523886.1;Parent=gene-LDO45_RS13175;Dbxref=GenBank:WP_059523886.1;Name=WP_059523886.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004545944.1;locus_tag=LDO45_RS13175;product=bile acid:sodium symporter family protein;protein_id=WP_059523886.1;transl_table=11 NZ_CAJZAS010000137.1 RefSeq pseudogene 3306 3491 . + . ID=gene-LDO45_RS13180;Name=LDO45_RS13180;end_range=3491,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13180;partial=true;pseudo=true NZ_CAJZAS010000137.1 Protein Homology CDS 3306 3491 . + 0 ID=cds-LDO45_RS13180;Parent=gene-LDO45_RS13180;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=3491,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353418.1;locus_tag=LDO45_RS13180;partial=true;product=peptide-binding protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000138.1 1 1245 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000138.1 RefSeq region 1 1245 . + . ID=NZ_CAJZAS010000138.1:1..1245;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_222 NZ_CAJZAS010000138.1 RefSeq pseudogene 1 370 . - . ID=gene-LDO45_RS13185;Name=LDO45_RS13185;end_range=370,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13185;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000138.1 Protein Homology CDS 1 370 . - 0 ID=cds-LDO45_RS13185;Parent=gene-LDO45_RS13185;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=370,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758232.1;locus_tag=LDO45_RS13185;partial=true;product=SDR family oxidoreductase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000138.1 RefSeq pseudogene 311 1245 . + . ID=gene-LDO45_RS13190;Name=LDO45_RS13190;end_range=1245,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13190;old_locus_tag=BDI4_2220002;partial=true;pseudo=true NZ_CAJZAS010000138.1 Protein Homology CDS 311 1245 . + 0 ID=cds-LDO45_RS13190;Parent=gene-LDO45_RS13190;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing C-terminus;Ontology_term=GO:0001216;end_range=1245,.;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881895.1;locus_tag=LDO45_RS13190;partial=true;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000139.1 1 2170 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000139.1 RefSeq region 1 2170 . + . ID=NZ_CAJZAS010000139.1:1..2170;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_223 NZ_CAJZAS010000139.1 RefSeq gene 1 247 . - . ID=gene-LDO45_RS13195;Name=LDO45_RS13195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13195;partial=true;start_range=.,1 NZ_CAJZAS010000139.1 GeneMarkS-2+ CDS 1 247 . - 0 ID=cds-WP_223961983.1;Parent=gene-LDO45_RS13195;Dbxref=GenBank:WP_223961983.1;Name=WP_223961983.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS13195;partial=true;product=hypothetical protein;protein_id=WP_223961983.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000139.1 RefSeq gene 1775 1860 . + . ID=gene-LDO45_RS13200;Name=LDO45_RS13200;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS13200;old_locus_tag=BDI4_TRNA29 NZ_CAJZAS010000139.1 tRNAscan-SE tRNA 1775 1860 . + . ID=rna-LDO45_RS13200;Parent=gene-LDO45_RS13200;anticodon=(pos:1809..1811);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS13200;product=tRNA-Tyr NZ_CAJZAS010000139.1 tRNAscan-SE exon 1775 1860 . + . ID=exon-LDO45_RS13200-1;Parent=rna-LDO45_RS13200;anticodon=(pos:1809..1811);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS13200;product=tRNA-Tyr NZ_CAJZAS010000139.1 RefSeq gene 1904 1977 . + . ID=gene-LDO45_RS13205;Name=LDO45_RS13205;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS13205;old_locus_tag=BDI4_TRNA30 NZ_CAJZAS010000139.1 tRNAscan-SE tRNA 1904 1977 . + . ID=rna-LDO45_RS13205;Parent=gene-LDO45_RS13205;anticodon=(pos:1936..1938);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS13205;product=tRNA-Gly NZ_CAJZAS010000139.1 tRNAscan-SE exon 1904 1977 . + . ID=exon-LDO45_RS13205-1;Parent=rna-LDO45_RS13205;anticodon=(pos:1936..1938);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS13205;product=tRNA-Gly NZ_CAJZAS010000139.1 RefSeq gene 2003 2077 . + . ID=gene-LDO45_RS13210;Name=LDO45_RS13210;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS13210;old_locus_tag=BDI4_TRNA31 NZ_CAJZAS010000139.1 tRNAscan-SE tRNA 2003 2077 . + . ID=rna-LDO45_RS13210;Parent=gene-LDO45_RS13210;anticodon=(pos:2035..2037);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS13210;product=tRNA-Thr NZ_CAJZAS010000139.1 tRNAscan-SE exon 2003 2077 . + . ID=exon-LDO45_RS13210-1;Parent=rna-LDO45_RS13210;anticodon=(pos:2035..2037);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS13210;product=tRNA-Thr ##sequence-region NZ_CAJZAS010000140.1 1 687 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000140.1 RefSeq region 1 687 . + . ID=NZ_CAJZAS010000140.1:1..687;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_224 NZ_CAJZAS010000140.1 RefSeq pseudogene 1 220 . - . ID=gene-LDO45_RS13215;Name=LDO45_RS13215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13215;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000140.1 Protein Homology CDS 1 220 . - 0 ID=cds-LDO45_RS13215;Parent=gene-LDO45_RS13215;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484857.1;locus_tag=LDO45_RS13215;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAS010000141.1 1 713 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000141.1 RefSeq region 1 713 . + . ID=NZ_CAJZAS010000141.1:1..713;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_225 NZ_CAJZAS010000141.1 RefSeq gene 1 586 . + . ID=gene-LDO45_RS13220;Name=LDO45_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13220;partial=true;start_range=.,1 NZ_CAJZAS010000141.1 Protein Homology CDS 1 586 . + 1 ID=cds-WP_223961985.1;Parent=gene-LDO45_RS13220;Dbxref=GenBank:WP_223961985.1;Name=WP_223961985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354023.1;locus_tag=LDO45_RS13220;partial=true;product=substrate-binding domain-containing protein;protein_id=WP_223961985.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAS010000142.1 1 1240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000142.1 RefSeq region 1 1240 . + . ID=NZ_CAJZAS010000142.1:1..1240;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_226 NZ_CAJZAS010000142.1 RefSeq pseudogene 231 391 . - . ID=gene-LDO45_RS13225;Name=LDO45_RS13225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13225;pseudo=true NZ_CAJZAS010000142.1 Protein Homology CDS 231 391 . - 0 ID=cds-LDO45_RS13225;Parent=gene-LDO45_RS13225;Note=frameshifted%3B too many ambiguous residues;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881902.1;locus_tag=LDO45_RS13225;product=Flp family type IVb pilin;pseudo=true;transl_table=11 NZ_CAJZAS010000142.1 RefSeq gene 818 1240 . - . ID=gene-LDO45_RS13230;Name=LDO45_RS13230;end_range=1240,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13230;partial=true NZ_CAJZAS010000142.1 GeneMarkS-2+ CDS 818 1240 . - 0 ID=cds-WP_223961987.1;Parent=gene-LDO45_RS13230;Dbxref=GenBank:WP_223961987.1;Name=WP_223961987.1;end_range=1240,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS13230;partial=true;product=hypothetical protein;protein_id=WP_223961987.1;transl_table=11 ##sequence-region NZ_CAJZAS010000143.1 1 816 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000143.1 RefSeq region 1 816 . + . ID=NZ_CAJZAS010000143.1:1..816;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_227 NZ_CAJZAS010000143.1 RefSeq pseudogene 1 372 . - . ID=gene-LDO45_RS13235;Name=LDO45_RS13235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13235;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000143.1 Protein Homology CDS 1 372 . - 0 ID=cds-LDO45_RS13235;Parent=gene-LDO45_RS13235;Note=frameshifted%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356588.1;locus_tag=LDO45_RS13235;partial=true;product=contractile injection system protein%2C VgrG/Pvc8 family;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000143.1 RefSeq gene 642 816 . - . ID=gene-LDO45_RS13240;Name=LDO45_RS13240;end_range=816,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13240;old_locus_tag=BDI4_2270003;partial=true NZ_CAJZAS010000143.1 Protein Homology CDS 642 816 . - 1 ID=cds-WP_223961989.1;Parent=gene-LDO45_RS13240;Dbxref=GenBank:WP_223961989.1;Name=WP_223961989.1;Ontology_term=GO:0003676;end_range=816,.;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401005.1;locus_tag=LDO45_RS13240;partial=true;product=DHHA1 domain-containing protein;protein_id=WP_223961989.1;transl_table=11 ##sequence-region NZ_CAJZAS010000144.1 1 8794 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000144.1 RefSeq region 1 8794 . + . ID=NZ_CAJZAS010000144.1:1..8794;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_228 NZ_CAJZAS010000144.1 RefSeq pseudogene 1 782 . + . ID=gene-LDO45_RS13245;Name=LDO45_RS13245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13245;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000144.1 Protein Homology CDS 1 782 . + 2 ID=cds-LDO45_RS13245;Parent=gene-LDO45_RS13245;Note=too many ambiguous residues%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548340.1;locus_tag=LDO45_RS13245;partial=true;product=collagen-like triple helix repeat-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000144.1 RefSeq gene 903 2186 . + . ID=gene-LDO45_RS13250;Name=LDO45_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13250;old_locus_tag=BDI4_2280003 NZ_CAJZAS010000144.1 Protein Homology CDS 903 2186 . + 0 ID=cds-WP_223961991.1;Parent=gene-LDO45_RS13250;Dbxref=GenBank:WP_223961991.1;Name=WP_223961991.1;Ontology_term=GO:0006481,GO:0004671,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity|0004671||IEA;go_process=C-terminal protein methylation|0006481||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495601.1;locus_tag=LDO45_RS13250;product=isoprenylcysteine carboxylmethyltransferase family protein;protein_id=WP_223961991.1;transl_table=11 NZ_CAJZAS010000144.1 RefSeq gene 2420 2569 . + . ID=gene-LDO45_RS13255;Name=LDO45_RS13255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13255;old_locus_tag=BDI4_2280004 NZ_CAJZAS010000144.1 GeneMarkS-2+ CDS 2420 2569 . + 0 ID=cds-WP_156441416.1;Parent=gene-LDO45_RS13255;Dbxref=GenBank:WP_156441416.1;Name=WP_156441416.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS13255;product=hypothetical protein;protein_id=WP_156441416.1;transl_table=11 NZ_CAJZAS010000144.1 RefSeq gene 2675 3352 . + . ID=gene-LDO45_RS13260;Name=LDO45_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13260;old_locus_tag=BDI4_2280005 NZ_CAJZAS010000144.1 Protein Homology CDS 2675 3352 . + 0 ID=cds-WP_223961993.1;Parent=gene-LDO45_RS13260;Dbxref=GenBank:WP_223961993.1;Name=WP_223961993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365445.1;locus_tag=LDO45_RS13260;product=histone acetyltransferase;protein_id=WP_223961993.1;transl_table=11 NZ_CAJZAS010000144.1 RefSeq gene 3407 3979 . + . ID=gene-LDO45_RS13265;Name=LDO45_RS13265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13265;old_locus_tag=BDI4_2280006 NZ_CAJZAS010000144.1 Protein Homology CDS 3407 3979 . + 0 ID=cds-WP_059702742.1;Parent=gene-LDO45_RS13265;Dbxref=GenBank:WP_059702742.1;Name=WP_059702742.1;Ontology_term=GO:0008752,GO:0010181,GO:0016491,GO:0052873;gbkey=CDS;go_function=FMN reductase (NAD(P)H) activity|0008752||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495604.1;locus_tag=LDO45_RS13265;product=NADPH-dependent FMN reductase;protein_id=WP_059702742.1;transl_table=11 NZ_CAJZAS010000144.1 RefSeq gene 4016 4651 . - . ID=gene-LDO45_RS13270;Name=LDO45_RS13270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13270;old_locus_tag=BDI4_2280007 NZ_CAJZAS010000144.1 Protein Homology CDS 4016 4651 . - 0 ID=cds-WP_223961995.1;Parent=gene-LDO45_RS13270;Dbxref=GenBank:WP_223961995.1;Name=WP_223961995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494009.1;locus_tag=LDO45_RS13270;product=DUF2894 domain-containing protein;protein_id=WP_223961995.1;transl_table=11 NZ_CAJZAS010000144.1 RefSeq gene 4648 5292 . - . ID=gene-LDO45_RS13275;Name=LDO45_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13275;old_locus_tag=BDI4_2280008 NZ_CAJZAS010000144.1 Protein Homology CDS 4648 5292 . - 0 ID=cds-WP_059531940.1;Parent=gene-LDO45_RS13275;Dbxref=GenBank:WP_059531940.1;Name=WP_059531940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217569.1;locus_tag=LDO45_RS13275;product=OmpA family protein;protein_id=WP_059531940.1;transl_table=11 NZ_CAJZAS010000144.1 RefSeq gene 5296 8343 . - . ID=gene-LDO45_RS13280;Name=LDO45_RS13280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13280;old_locus_tag=BDI4_2280009 NZ_CAJZAS010000144.1 Protein Homology CDS 5296 8343 . - 0 ID=cds-WP_223961996.1;Parent=gene-LDO45_RS13280;Dbxref=GenBank:WP_223961996.1;Name=WP_223961996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356050.1;locus_tag=LDO45_RS13280;product=DUF802 domain-containing protein;protein_id=WP_223961996.1;transl_table=11 NZ_CAJZAS010000144.1 RefSeq gene 8354 8794 . - . ID=gene-LDO45_RS13285;Name=LDO45_RS13285;end_range=8794,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13285;old_locus_tag=BDI4_2280010;partial=true NZ_CAJZAS010000144.1 Protein Homology CDS 8354 8794 . - 0 ID=cds-WP_223961998.1;Parent=gene-LDO45_RS13285;Dbxref=GenBank:WP_223961998.1;Name=WP_223961998.1;end_range=8794,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660317.1;locus_tag=LDO45_RS13285;partial=true;product=DUF3348 family protein;protein_id=WP_223961998.1;transl_table=11 ##sequence-region NZ_CAJZAS010000145.1 1 691 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000145.1 RefSeq region 1 691 . + . ID=NZ_CAJZAS010000145.1:1..691;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_229 NZ_CAJZAS010000145.1 RefSeq gene 1 207 . - . ID=gene-LDO45_RS13290;Name=LDO45_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13290;partial=true;start_range=.,1 NZ_CAJZAS010000145.1 GeneMarkS-2+ CDS 1 207 . - 0 ID=cds-WP_223962001.1;Parent=gene-LDO45_RS13290;Dbxref=GenBank:WP_223962001.1;Name=WP_223962001.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS13290;partial=true;product=hypothetical protein;protein_id=WP_223962001.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000145.1 RefSeq gene 462 656 . + . ID=gene-LDO45_RS13295;Name=LDO45_RS13295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13295;old_locus_tag=BDI4_2290002 NZ_CAJZAS010000145.1 Protein Homology CDS 462 656 . + 0 ID=cds-WP_059449338.1;Parent=gene-LDO45_RS13295;Dbxref=GenBank:WP_059449338.1;Name=WP_059449338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413910.1;locus_tag=LDO45_RS13295;product=hypothetical protein;protein_id=WP_059449338.1;transl_table=11 ##sequence-region NZ_CAJZAS010000146.1 1 71697 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000146.1 RefSeq region 1 71697 . + . ID=NZ_CAJZAS010000146.1:1..71697;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_23 NZ_CAJZAS010000146.1 RefSeq gene 87 1220 . - . ID=gene-LDO45_RS13300;Name=LDO45_RS13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13300;old_locus_tag=BDI4_230001 NZ_CAJZAS010000146.1 Protein Homology CDS 87 1220 . - 0 ID=cds-WP_223962002.1;Parent=gene-LDO45_RS13300;Dbxref=GenBank:WP_223962002.1;Name=WP_223962002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899088.1;locus_tag=LDO45_RS13300;product=LysM peptidoglycan-binding domain-containing protein;protein_id=WP_223962002.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 1241 2011 . - . ID=gene-LDO45_RS13305;Name=LDO45_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13305;old_locus_tag=BDI4_230002 NZ_CAJZAS010000146.1 Protein Homology CDS 1241 2011 . - 0 ID=cds-WP_223962004.1;Parent=gene-LDO45_RS13305;Dbxref=GenBank:WP_223962004.1;Name=WP_223962004.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354918.1;locus_tag=LDO45_RS13305;product=hypothetical protein;protein_id=WP_223962004.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 2653 3507 . - . ID=gene-LDO45_RS13310;Name=LDO45_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13310;old_locus_tag=BDI4_230003 NZ_CAJZAS010000146.1 Protein Homology CDS 2653 3507 . - 0 ID=cds-WP_223962006.1;Parent=gene-LDO45_RS13310;Dbxref=GenBank:WP_223962006.1;Name=WP_223962006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899086.1;locus_tag=LDO45_RS13310;product=amidohydrolase;protein_id=WP_223962006.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 3504 4526 . - . ID=gene-LDO45_RS13315;Name=LDO45_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13315;old_locus_tag=BDI4_230004 NZ_CAJZAS010000146.1 Protein Homology CDS 3504 4526 . - 0 ID=cds-WP_223962008.1;Parent=gene-LDO45_RS13315;Dbxref=GenBank:WP_223962008.1;Name=WP_223962008.1;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493373.1;locus_tag=LDO45_RS13315;product=D-isomer specific 2-hydroxyacid dehydrogenase family protein;protein_id=WP_223962008.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 4523 5599 . - . ID=gene-LDO45_RS13320;Name=LDO45_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13320;old_locus_tag=BDI4_230005 NZ_CAJZAS010000146.1 Protein Homology CDS 4523 5599 . - 0 ID=cds-WP_223962010.1;Parent=gene-LDO45_RS13320;Dbxref=GenBank:WP_223962010.1;Name=WP_223962010.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494696.1;locus_tag=LDO45_RS13320;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_223962010.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 5608 7494 . - . ID=gene-LDO45_RS13325;Name=LDO45_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13325;old_locus_tag=BDI4_230006 NZ_CAJZAS010000146.1 Protein Homology CDS 5608 7494 . - 0 ID=cds-WP_223962012.1;Parent=gene-LDO45_RS13325;Dbxref=GenBank:WP_223962012.1;Name=WP_223962012.1;Ontology_term=GO:0015740,GO:0015556,GO:0016020,GO:0031317;gbkey=CDS;go_component=membrane|0016020||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478901.1;locus_tag=LDO45_RS13325;product=TRAP transporter large permease subunit;protein_id=WP_223962012.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 7498 8526 . - . ID=gene-LDO45_RS13330;Name=LDO45_RS13330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13330;old_locus_tag=BDI4_230007 NZ_CAJZAS010000146.1 Protein Homology CDS 7498 8526 . - 0 ID=cds-WP_223962014.1;Parent=gene-LDO45_RS13330;Dbxref=GenBank:WP_223962014.1;Name=WP_223962014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754171.1;locus_tag=LDO45_RS13330;product=TRAP transporter substrate-binding protein;protein_id=WP_223962014.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 8747 9655 . - . ID=gene-LDO45_RS13335;Name=LDO45_RS13335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13335;old_locus_tag=BDI4_230008 NZ_CAJZAS010000146.1 Protein Homology CDS 8747 9655 . - 0 ID=cds-WP_223962016.1;Parent=gene-LDO45_RS13335;Dbxref=GenBank:WP_223962016.1;Name=WP_223962016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754170.1;locus_tag=LDO45_RS13335;product=LysR substrate-binding domain-containing protein;protein_id=WP_223962016.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 9839 10807 . - . ID=gene-LDO45_RS13340;Name=LDO45_RS13340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13340;old_locus_tag=BDI4_230009 NZ_CAJZAS010000146.1 Protein Homology CDS 9839 10807 . - 0 ID=cds-WP_059533858.1;Parent=gene-LDO45_RS13340;Dbxref=GenBank:WP_059533858.1;Name=WP_059533858.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329160.1;locus_tag=LDO45_RS13340;product=LysR family transcriptional regulator;protein_id=WP_059533858.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 11173 12348 . + . ID=gene-LDO45_RS13345;Name=LDO45_RS13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13345;old_locus_tag=BDI4_230010 NZ_CAJZAS010000146.1 Protein Homology CDS 11173 12348 . + 0 ID=cds-WP_223962018.1;Parent=gene-LDO45_RS13345;Dbxref=GenBank:WP_223962018.1;Name=WP_223962018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754166.1;locus_tag=LDO45_RS13345;product=HPP family protein;protein_id=WP_223962018.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 12452 12865 . + . ID=gene-LDO45_RS13350;Name=LDO45_RS13350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13350;old_locus_tag=BDI4_230011 NZ_CAJZAS010000146.1 Protein Homology CDS 12452 12865 . + 0 ID=cds-WP_059533862.1;Parent=gene-LDO45_RS13350;Dbxref=GenBank:WP_059533862.1;Name=WP_059533862.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899076.1;locus_tag=LDO45_RS13350;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_059533862.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 12896 14683 . + . ID=gene-LDO45_RS13355;Name=LDO45_RS13355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13355;old_locus_tag=BDI4_230012 NZ_CAJZAS010000146.1 Protein Homology CDS 12896 14683 . + 0 ID=cds-WP_223962020.1;Parent=gene-LDO45_RS13355;Dbxref=GenBank:WP_223962020.1;Name=WP_223962020.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766047.1;locus_tag=LDO45_RS13355;product=chloride channel protein;protein_id=WP_223962020.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 15108 15440 . + . ID=gene-LDO45_RS13360;Name=LDO45_RS13360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13360;old_locus_tag=BDI4_230013 NZ_CAJZAS010000146.1 Protein Homology CDS 15108 15440 . + 0 ID=cds-WP_175909541.1;Parent=gene-LDO45_RS13360;Dbxref=GenBank:WP_175909541.1;Name=WP_175909541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899074.1;locus_tag=LDO45_RS13360;product=hypothetical protein;protein_id=WP_175909541.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 15554 15874 . - . ID=gene-LDO45_RS13365;Name=LDO45_RS13365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13365;old_locus_tag=BDI4_230014 NZ_CAJZAS010000146.1 Protein Homology CDS 15554 15874 . - 0 ID=cds-WP_006478890.1;Parent=gene-LDO45_RS13365;Dbxref=GenBank:WP_006478890.1;Name=WP_006478890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658970.1;locus_tag=LDO45_RS13365;product=pyrimidine/purine nucleoside phosphorylase;protein_id=WP_006478890.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 16052 16954 . - . ID=gene-LDO45_RS13370;Name=LDO45_RS13370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13370;old_locus_tag=BDI4_230015 NZ_CAJZAS010000146.1 Protein Homology CDS 16052 16954 . - 0 ID=cds-WP_059533866.1;Parent=gene-LDO45_RS13370;Dbxref=GenBank:WP_059533866.1;Name=WP_059533866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603290.1;locus_tag=LDO45_RS13370;product=LysR substrate-binding domain-containing protein;protein_id=WP_059533866.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 17135 18319 . + . ID=gene-LDO45_RS13375;Name=LDO45_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13375;old_locus_tag=BDI4_230016 NZ_CAJZAS010000146.1 Protein Homology CDS 17135 18319 . + 0 ID=cds-WP_223962022.1;Parent=gene-LDO45_RS13375;Dbxref=GenBank:WP_223962022.1;Name=WP_223962022.1;Ontology_term=GO:0016787,GO:0016810;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403395.1;locus_tag=LDO45_RS13375;product=M20 aminoacylase family protein;protein_id=WP_223962022.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 18363 19682 . + . ID=gene-LDO45_RS13380;Name=LDO45_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13380;old_locus_tag=BDI4_230017 NZ_CAJZAS010000146.1 Protein Homology CDS 18363 19682 . + 0 ID=cds-WP_223962024.1;Parent=gene-LDO45_RS13380;Dbxref=GenBank:WP_223962024.1;Name=WP_223962024.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004556566.1;locus_tag=LDO45_RS13380;product=MFS transporter;protein_id=WP_223962024.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 19878 20981 . - . ID=gene-LDO45_RS13385;Name=LDO45_RS13385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13385;old_locus_tag=BDI4_230018 NZ_CAJZAS010000146.1 Protein Homology CDS 19878 20981 . - 0 ID=cds-WP_059533872.1;Parent=gene-LDO45_RS13385;Dbxref=GenBank:WP_059533872.1;Name=WP_059533872.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494684.1;locus_tag=LDO45_RS13385;product=porin;protein_id=WP_059533872.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 21045 21464 . - . ID=gene-LDO45_RS13390;Name=LDO45_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13390;old_locus_tag=BDI4_230019 NZ_CAJZAS010000146.1 Protein Homology CDS 21045 21464 . - 0 ID=cds-WP_059533874.1;Parent=gene-LDO45_RS13390;Dbxref=GenBank:WP_059533874.1;Name=WP_059533874.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547564.1;locus_tag=LDO45_RS13390;product=DoxX family protein;protein_id=WP_059533874.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 21641 22918 . - . ID=gene-LDO45_RS13395;Name=LDO45_RS13395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13395;old_locus_tag=BDI4_230020 NZ_CAJZAS010000146.1 Protein Homology CDS 21641 22918 . - 0 ID=cds-WP_223962026.1;Parent=gene-LDO45_RS13395;Dbxref=GenBank:WP_223962026.1;Name=WP_223962026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396899.1;locus_tag=LDO45_RS13395;product=cytochrome c;protein_id=WP_223962026.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 22921 24540 . - . ID=gene-LDO45_RS13400;Name=LDO45_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13400;old_locus_tag=BDI4_230021 NZ_CAJZAS010000146.1 Protein Homology CDS 22921 24540 . - 0 ID=cds-WP_223962028.1;Parent=gene-LDO45_RS13400;Dbxref=GenBank:WP_223962028.1;Name=WP_223962028.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396898.1;locus_tag=LDO45_RS13400;product=GMC family oxidoreductase;protein_id=WP_223962028.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 24540 25046 . - . ID=gene-LDO45_RS13405;Name=LDO45_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13405;old_locus_tag=BDI4_230022 NZ_CAJZAS010000146.1 Protein Homology CDS 24540 25046 . - 0 ID=cds-WP_059691289.1;Parent=gene-LDO45_RS13405;Dbxref=GenBank:WP_059691289.1;Name=WP_059691289.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009900299.1;locus_tag=LDO45_RS13405;product=sugar dehydrogenase complex small subunit;protein_id=WP_059691289.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 25357 31389 . + . ID=gene-LDO45_RS13410;Name=LDO45_RS13410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13410;old_locus_tag=BDI4_230023 NZ_CAJZAS010000146.1 Protein Homology CDS 25357 31389 . + 0 ID=cds-WP_223962030.1;Parent=gene-LDO45_RS13410;Dbxref=GenBank:WP_223962030.1;Name=WP_223962030.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899064.1;locus_tag=LDO45_RS13410;product=alpha-2-macroglobulin;protein_id=WP_223962030.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 31400 33637 . + . ID=gene-LDO45_RS13415;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=LDO45_RS13415;old_locus_tag=BDI4_230024 NZ_CAJZAS010000146.1 Protein Homology CDS 31400 33637 . + 0 ID=cds-WP_223962032.1;Parent=gene-LDO45_RS13415;Dbxref=GenBank:WP_223962032.1;Name=WP_223962032.1;Ontology_term=GO:0009252,GO:0003824,GO:0009274;gbkey=CDS;gene=pbpC;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=catalytic activity|0003824||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756334.1;locus_tag=LDO45_RS13415;product=penicillin-binding protein 1C;protein_id=WP_223962032.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 33655 34275 . - . ID=gene-LDO45_RS13420;Name=LDO45_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13420;old_locus_tag=BDI4_230025 NZ_CAJZAS010000146.1 Protein Homology CDS 33655 34275 . - 0 ID=cds-WP_059691292.1;Parent=gene-LDO45_RS13420;Dbxref=GenBank:WP_059691292.1;Name=WP_059691292.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354894.1;locus_tag=LDO45_RS13420;product=LemA family protein;protein_id=WP_059691292.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 34367 35953 . - . ID=gene-LDO45_RS13425;Name=LDO45_RS13425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13425;old_locus_tag=BDI4_230026 NZ_CAJZAS010000146.1 Protein Homology CDS 34367 35953 . - 0 ID=cds-WP_223962034.1;Parent=gene-LDO45_RS13425;Dbxref=GenBank:WP_223962034.1;Name=WP_223962034.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016424.5;locus_tag=LDO45_RS13425;product=YgcG family protein;protein_id=WP_223962034.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 36042 36734 . + . ID=gene-LDO45_RS13430;Name=LDO45_RS13430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13430;old_locus_tag=BDI4_230027 NZ_CAJZAS010000146.1 Protein Homology CDS 36042 36734 . + 0 ID=cds-WP_223962035.1;Parent=gene-LDO45_RS13430;Dbxref=GenBank:WP_223962035.1;Name=WP_223962035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478873.1;locus_tag=LDO45_RS13430;product=hypothetical protein;protein_id=WP_223962035.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 36781 38028 . - . ID=gene-LDO45_RS13435;Name=LDO45_RS13435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13435;old_locus_tag=BDI4_230028 NZ_CAJZAS010000146.1 Protein Homology CDS 36781 38028 . - 0 ID=cds-WP_059533893.1;Parent=gene-LDO45_RS13435;Dbxref=GenBank:WP_059533893.1;Name=WP_059533893.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756332.1;locus_tag=LDO45_RS13435;product=multidrug effflux MFS transporter;protein_id=WP_059533893.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 38331 39227 . - . ID=gene-LDO45_RS13440;Name=LDO45_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13440;old_locus_tag=BDI4_230029 NZ_CAJZAS010000146.1 Protein Homology CDS 38331 39227 . - 0 ID=cds-WP_223962037.1;Parent=gene-LDO45_RS13440;Dbxref=GenBank:WP_223962037.1;Name=WP_223962037.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410345.1;locus_tag=LDO45_RS13440;product=glutamate/aspartate ABC transporter substrate-binding protein;protein_id=WP_223962037.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 39643 41304 . + . ID=gene-LDO45_RS13445;Name=LDO45_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13445;old_locus_tag=BDI4_230030 NZ_CAJZAS010000146.1 Protein Homology CDS 39643 41304 . + 0 ID=cds-WP_223962038.1;Parent=gene-LDO45_RS13445;Dbxref=GenBank:WP_223962038.1;Name=WP_223962038.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492903.1;locus_tag=LDO45_RS13445;product=S8 family peptidase;protein_id=WP_223962038.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 42022 44793 . + . ID=gene-LDO45_RS13450;Name=mgtA;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=LDO45_RS13450;old_locus_tag=BDI4_230031 NZ_CAJZAS010000146.1 Protein Homology CDS 42022 44793 . + 0 ID=cds-WP_223962039.1;Parent=gene-LDO45_RS13450;Dbxref=GenBank:WP_223962039.1;Name=WP_223962039.1;Ontology_term=GO:0015693,GO:0015444,GO:0016020;gbkey=CDS;gene=mgtA;go_component=membrane|0016020||IEA;go_function=P-type magnesium transporter activity|0015444||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403307.1;locus_tag=LDO45_RS13450;product=magnesium-translocating P-type ATPase;protein_id=WP_223962039.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 44861 45607 . + . ID=gene-LDO45_RS13455;Name=LDO45_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13455;old_locus_tag=BDI4_230032 NZ_CAJZAS010000146.1 Protein Homology CDS 44861 45607 . + 0 ID=cds-WP_223962040.1;Parent=gene-LDO45_RS13455;Dbxref=GenBank:WP_223962040.1;Name=WP_223962040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899055.1;locus_tag=LDO45_RS13455;product=transporter;protein_id=WP_223962040.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 45680 45964 . - . ID=gene-LDO45_RS13460;Name=LDO45_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13460;old_locus_tag=BDI4_230033 NZ_CAJZAS010000146.1 Protein Homology CDS 45680 45964 . - 0 ID=cds-WP_059534015.1;Parent=gene-LDO45_RS13460;Dbxref=GenBank:WP_059534015.1;Name=WP_059534015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354884.1;locus_tag=LDO45_RS13460;product=hypothetical protein;protein_id=WP_059534015.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 46036 46911 . - . ID=gene-LDO45_RS13465;Name=LDO45_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13465;old_locus_tag=BDI4_230034 NZ_CAJZAS010000146.1 Protein Homology CDS 46036 46911 . - 0 ID=cds-WP_059698396.1;Parent=gene-LDO45_RS13465;Dbxref=GenBank:WP_059698396.1;Name=WP_059698396.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478865.1;locus_tag=LDO45_RS13465;product=LysR family transcriptional regulator;protein_id=WP_059698396.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 47005 47241 . + . ID=gene-LDO45_RS13470;Name=LDO45_RS13470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13470;old_locus_tag=BDI4_230035 NZ_CAJZAS010000146.1 Protein Homology CDS 47005 47241 . + 0 ID=cds-WP_223962041.1;Parent=gene-LDO45_RS13470;Dbxref=GenBank:WP_223962041.1;Name=WP_223962041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366224.1;locus_tag=LDO45_RS13470;product=hypothetical protein;protein_id=WP_223962041.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 47439 48506 . + . ID=gene-LDO45_RS13475;Name=LDO45_RS13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13475;old_locus_tag=BDI4_230036 NZ_CAJZAS010000146.1 Protein Homology CDS 47439 48506 . + 0 ID=cds-WP_223962042.1;Parent=gene-LDO45_RS13475;Dbxref=GenBank:WP_223962042.1;Name=WP_223962042.1;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354880.1;locus_tag=LDO45_RS13475;product=serine hydrolase;protein_id=WP_223962042.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 48553 48789 . + . ID=gene-LDO45_RS13480;Name=LDO45_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13480;old_locus_tag=BDI4_230037 NZ_CAJZAS010000146.1 Protein Homology CDS 48553 48789 . + 0 ID=cds-WP_223962043.1;Parent=gene-LDO45_RS13480;Dbxref=GenBank:WP_223962043.1;Name=WP_223962043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658999.1;locus_tag=LDO45_RS13480;product=hypothetical protein;protein_id=WP_223962043.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 48883 49338 . + . ID=gene-LDO45_RS13485;Name=LDO45_RS13485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13485;old_locus_tag=BDI4_230038 NZ_CAJZAS010000146.1 Protein Homology CDS 48883 49338 . + 0 ID=cds-WP_059533911.1;Parent=gene-LDO45_RS13485;Dbxref=GenBank:WP_059533911.1;Name=WP_059533911.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478861.1;locus_tag=LDO45_RS13485;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_059533911.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 49406 49969 . + . ID=gene-LDO45_RS13490;Name=LDO45_RS13490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13490;old_locus_tag=BDI4_230039 NZ_CAJZAS010000146.1 Protein Homology CDS 49406 49969 . + 0 ID=cds-WP_223962045.1;Parent=gene-LDO45_RS13490;Dbxref=GenBank:WP_223962045.1;Name=WP_223962045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396870.1;locus_tag=LDO45_RS13490;product=isochorismatase family protein;protein_id=WP_223962045.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 49966 51420 . + . ID=gene-LDO45_RS13495;Name=LDO45_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13495;old_locus_tag=BDI4_230040 NZ_CAJZAS010000146.1 Protein Homology CDS 49966 51420 . + 0 ID=cds-WP_223962047.1;Parent=gene-LDO45_RS13495;Dbxref=GenBank:WP_223962047.1;Name=WP_223962047.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413453.1;locus_tag=LDO45_RS13495;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_223962047.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 51722 52963 . + . ID=gene-LDO45_RS13500;Name=LDO45_RS13500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13500;old_locus_tag=BDI4_230041 NZ_CAJZAS010000146.1 Protein Homology CDS 51722 52963 . + 0 ID=cds-WP_223962049.1;Parent=gene-LDO45_RS13500;Dbxref=GenBank:WP_223962049.1;Name=WP_223962049.1;Ontology_term=GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752346.1;locus_tag=LDO45_RS13500;product=mechanosensitive ion channel family protein;protein_id=WP_223962049.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 53031 54452 . - . ID=gene-LDO45_RS13505;Name=LDO45_RS13505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13505;old_locus_tag=BDI4_230042 NZ_CAJZAS010000146.1 Protein Homology CDS 53031 54452 . - 0 ID=cds-WP_223962051.1;Parent=gene-LDO45_RS13505;Dbxref=GenBank:WP_223962051.1;Name=WP_223962051.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604151.1;locus_tag=LDO45_RS13505;product=PLP-dependent aminotransferase family protein;protein_id=WP_223962051.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 54605 56929 . + . ID=gene-LDO45_RS13510;Name=LDO45_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13510;old_locus_tag=BDI4_230044 NZ_CAJZAS010000146.1 Protein Homology CDS 54605 56929 . + 0 ID=cds-WP_223962053.1;Parent=gene-LDO45_RS13510;Dbxref=GenBank:WP_223962053.1;Name=WP_223962053.1;Ontology_term=GO:0016491,GO:0030151,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752344.1;locus_tag=LDO45_RS13510;product=FdhF/YdeP family oxidoreductase;protein_id=WP_223962053.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 57154 57483 . + . ID=gene-LDO45_RS13515;Name=LDO45_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13515;old_locus_tag=BDI4_230045 NZ_CAJZAS010000146.1 Protein Homology CDS 57154 57483 . + 0 ID=cds-WP_223962055.1;Parent=gene-LDO45_RS13515;Dbxref=GenBank:WP_223962055.1;Name=WP_223962055.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899032.1;locus_tag=LDO45_RS13515;product=hypothetical protein;protein_id=WP_223962055.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 57731 58063 . + . ID=gene-LDO45_RS13520;Name=LDO45_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13520;old_locus_tag=BDI4_230046 NZ_CAJZAS010000146.1 Protein Homology CDS 57731 58063 . + 0 ID=cds-WP_223962057.1;Parent=gene-LDO45_RS13520;Dbxref=GenBank:WP_223962057.1;Name=WP_223962057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396861.1;locus_tag=LDO45_RS13520;product=sugar ABC transporter ATPase;protein_id=WP_223962057.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 58202 59791 . + . ID=gene-LDO45_RS13525;Name=LDO45_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13525;old_locus_tag=BDI4_230047 NZ_CAJZAS010000146.1 Protein Homology CDS 58202 59791 . + 0 ID=cds-WP_223962058.1;Parent=gene-LDO45_RS13525;Dbxref=GenBank:WP_223962058.1;Name=WP_223962058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216866.1;locus_tag=LDO45_RS13525;product=ABC transporter substrate-binding protein;protein_id=WP_223962058.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 59866 61173 . - . ID=gene-LDO45_RS13530;Name=LDO45_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13530;old_locus_tag=BDI4_230048 NZ_CAJZAS010000146.1 Protein Homology CDS 59866 61173 . - 0 ID=cds-WP_223962059.1;Parent=gene-LDO45_RS13530;Dbxref=GenBank:WP_223962059.1;Name=WP_223962059.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483533.1;locus_tag=LDO45_RS13530;product=Nramp family divalent metal transporter;protein_id=WP_223962059.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 61249 62505 . - . ID=gene-LDO45_RS13535;Name=LDO45_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13535;old_locus_tag=BDI4_230050 NZ_CAJZAS010000146.1 Protein Homology CDS 61249 62505 . - 0 ID=cds-WP_059533932.1;Parent=gene-LDO45_RS13535;Dbxref=GenBank:WP_059533932.1;Name=WP_059533932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366239.1;locus_tag=LDO45_RS13535;product=oxalate decarboxylase family bicupin;protein_id=WP_059533932.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 62895 63776 . + . ID=gene-LDO45_RS13540;Name=sapR;gbkey=Gene;gene=sapR;gene_biotype=protein_coding;locus_tag=LDO45_RS13540;old_locus_tag=BDI4_230052 NZ_CAJZAS010000146.1 Protein Homology CDS 62895 63776 . + 0 ID=cds-WP_059691311.1;Parent=gene-LDO45_RS13540;Dbxref=GenBank:WP_059691311.1;Name=WP_059691311.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=sapR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216865.1;locus_tag=LDO45_RS13540;product=sap1 transcriptional regulator SapR;protein_id=WP_059691311.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 63792 64355 . + . ID=gene-LDO45_RS13545;Name=ddpX;gbkey=Gene;gene=ddpX;gene_biotype=protein_coding;locus_tag=LDO45_RS13545;old_locus_tag=BDI4_230054 NZ_CAJZAS010000146.1 Protein Homology CDS 63792 64355 . + 0 ID=cds-WP_223962060.1;Parent=gene-LDO45_RS13545;Dbxref=GenBank:WP_223962060.1;Name=WP_223962060.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;gene=ddpX;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366241.1;locus_tag=LDO45_RS13545;product=D-alanyl-D-alanine dipeptidase;protein_id=WP_223962060.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 64421 66022 . + . ID=gene-LDO45_RS13550;Name=LDO45_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13550;old_locus_tag=BDI4_230053 NZ_CAJZAS010000146.1 Protein Homology CDS 64421 66022 . + 0 ID=cds-WP_059691313.1;Parent=gene-LDO45_RS13550;Dbxref=GenBank:WP_059691313.1;Name=WP_059691313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766074.1;locus_tag=LDO45_RS13550;product=ABC transporter substrate-binding protein;protein_id=WP_059691313.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 66033 67103 . + . ID=gene-LDO45_RS13555;Name=LDO45_RS13555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13555;old_locus_tag=BDI4_230055 NZ_CAJZAS010000146.1 Protein Homology CDS 66033 67103 . + 0 ID=cds-WP_059533939.1;Parent=gene-LDO45_RS13555;Dbxref=GenBank:WP_059533939.1;Name=WP_059533939.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882391.1;locus_tag=LDO45_RS13555;product=ABC transporter permease;protein_id=WP_059533939.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 67170 68084 . + . ID=gene-LDO45_RS13560;Name=nikC;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=LDO45_RS13560;old_locus_tag=BDI4_230056 NZ_CAJZAS010000146.1 Protein Homology CDS 67170 68084 . + 0 ID=cds-WP_223962061.1;Parent=gene-LDO45_RS13560;Dbxref=GenBank:WP_223962061.1;Name=WP_223962061.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=nikC;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899028.1;locus_tag=LDO45_RS13560;product=nickel transporter permease;protein_id=WP_223962061.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 68086 69000 . + . ID=gene-LDO45_RS13565;Name=LDO45_RS13565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13565;old_locus_tag=BDI4_230057 NZ_CAJZAS010000146.1 Protein Homology CDS 68086 69000 . + 0 ID=cds-WP_223962062.1;Parent=gene-LDO45_RS13565;Dbxref=GenBank:WP_223962062.1;Name=WP_223962062.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756294.1;locus_tag=LDO45_RS13565;product=ABC transporter ATP-binding protein;protein_id=WP_223962062.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 68997 69758 . + . ID=gene-LDO45_RS13570;Name=LDO45_RS13570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13570;old_locus_tag=BDI4_230058 NZ_CAJZAS010000146.1 Protein Homology CDS 68997 69758 . + 0 ID=cds-WP_044843242.1;Parent=gene-LDO45_RS13570;Dbxref=GenBank:WP_044843242.1;Name=WP_044843242.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882394.1;locus_tag=LDO45_RS13570;product=ABC transporter ATP-binding protein;protein_id=WP_044843242.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 69904 70158 . + . ID=gene-LDO45_RS13575;Name=LDO45_RS13575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13575;old_locus_tag=BDI4_230059 NZ_CAJZAS010000146.1 Protein Homology CDS 69904 70158 . + 0 ID=cds-WP_059691315.1;Parent=gene-LDO45_RS13575;Dbxref=GenBank:WP_059691315.1;Name=WP_059691315.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659025.1;locus_tag=LDO45_RS13575;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_059691315.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 70521 70856 . + . ID=gene-LDO45_RS13580;Name=LDO45_RS13580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13580;old_locus_tag=BDI4_230060 NZ_CAJZAS010000146.1 Protein Homology CDS 70521 70856 . + 0 ID=cds-WP_223962063.1;Parent=gene-LDO45_RS13580;Dbxref=GenBank:WP_223962063.1;Name=WP_223962063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467956.1;locus_tag=LDO45_RS13580;product=type 1 fimbrial protein;protein_id=WP_223962063.1;transl_table=11 NZ_CAJZAS010000146.1 RefSeq gene 70882 71697 . - . ID=gene-LDO45_RS13585;Name=LDO45_RS13585;end_range=71697,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13585;old_locus_tag=BDI4_230061;partial=true NZ_CAJZAS010000146.1 Protein Homology CDS 70882 71697 . - 0 ID=cds-WP_223962064.1;Parent=gene-LDO45_RS13585;Dbxref=GenBank:WP_223962064.1;Name=WP_223962064.1;end_range=71697,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478829.1;locus_tag=LDO45_RS13585;partial=true;product=LysR substrate-binding domain-containing protein;protein_id=WP_223962064.1;transl_table=11 ##sequence-region NZ_CAJZAS010000147.1 1 387 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000147.1 RefSeq region 1 387 . + . ID=NZ_CAJZAS010000147.1:1..387;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_230 NZ_CAJZAS010000147.1 RefSeq pseudogene 1 152 . + . ID=gene-LDO45_RS13590;Name=LDO45_RS13590;end_range=152,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13590;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000147.1 Protein Homology CDS 1 152 . + 2 ID=cds-LDO45_RS13590;Parent=gene-LDO45_RS13590;Note=too many ambiguous residues%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0051536;end_range=152,.;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255661.1;locus_tag=LDO45_RS13590;partial=true;product=2Fe-2S iron-sulfur cluster-binding protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000147.1 RefSeq gene 149 387 . + . ID=gene-LDO45_RS13595;Name=LDO45_RS13595;end_range=387,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13595;partial=true;start_range=.,149 NZ_CAJZAS010000147.1 Protein Homology CDS 149 387 . + 0 ID=cds-WP_223962068.1;Parent=gene-LDO45_RS13595;Dbxref=GenBank:WP_223962068.1;Name=WP_223962068.1;end_range=387,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895627.1;locus_tag=LDO45_RS13595;partial=true;product=DUF1835 domain-containing protein;protein_id=WP_223962068.1;start_range=.,149;transl_table=11 ##sequence-region NZ_CAJZAS010000148.1 1 2180 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000148.1 RefSeq region 1 2180 . + . ID=NZ_CAJZAS010000148.1:1..2180;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_231 NZ_CAJZAS010000148.1 RefSeq pseudogene 1 711 . + . ID=gene-LDO45_RS13600;Name=LDO45_RS13600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13600;old_locus_tag=BDI4_2310002;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000148.1 Protein Homology CDS 1 711 . + 1 ID=cds-LDO45_RS13600;Parent=gene-LDO45_RS13600;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492534.1;locus_tag=LDO45_RS13600;partial=true;product=YbfB/YjiJ family MFS transporter;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000148.1 RefSeq gene 833 1369 . + . ID=gene-LDO45_RS13605;Name=LDO45_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13605;old_locus_tag=BDI4_2310003 NZ_CAJZAS010000148.1 Protein Homology CDS 833 1369 . + 0 ID=cds-WP_059524079.1;Parent=gene-LDO45_RS13605;Dbxref=GenBank:WP_059524079.1;Name=WP_059524079.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494058.1;locus_tag=LDO45_RS13605;product=NUDIX domain-containing protein;protein_id=WP_059524079.1;transl_table=11 NZ_CAJZAS010000148.1 RefSeq gene 1509 1946 . + . ID=gene-LDO45_RS13610;Name=LDO45_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13610;old_locus_tag=BDI4_2310004 NZ_CAJZAS010000148.1 Protein Homology CDS 1509 1946 . + 0 ID=cds-WP_059606502.1;Parent=gene-LDO45_RS13610;Dbxref=GenBank:WP_059606502.1;Name=WP_059606502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762458.1;locus_tag=LDO45_RS13610;product=thioesterase family protein;protein_id=WP_059606502.1;transl_table=11 NZ_CAJZAS010000148.1 RefSeq pseudogene 1960 2180 . + . ID=gene-LDO45_RS13615;Name=LDO45_RS13615;end_range=2180,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13615;partial=true;pseudo=true NZ_CAJZAS010000148.1 Protein Homology CDS 1960 2180 . + 0 ID=cds-LDO45_RS13615;Parent=gene-LDO45_RS13615;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2180,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897291.1;locus_tag=LDO45_RS13615;partial=true;product=branched-chain amino acid ABC transporter permease;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000149.1 1 499 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000149.1 RefSeq region 1 499 . + . ID=NZ_CAJZAS010000149.1:1..499;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_232 NZ_CAJZAS010000149.1 RefSeq pseudogene 41 499 . - . ID=gene-LDO45_RS13620;Name=LDO45_RS13620;end_range=499,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13620;partial=true;pseudo=true NZ_CAJZAS010000149.1 Protein Homology CDS 41 499 . - 1 ID=cds-LDO45_RS13620;Parent=gene-LDO45_RS13620;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing N-terminus;Ontology_term=GO:0009073,GO:0004107;end_range=499,.;gbkey=CDS;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413771.1;locus_tag=LDO45_RS13620;partial=true;product=chorismate synthase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000150.1 1 767 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000150.1 RefSeq region 1 767 . + . ID=NZ_CAJZAS010000150.1:1..767;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_233 NZ_CAJZAS010000150.1 RefSeq pseudogene 1 527 . - . ID=gene-LDO45_RS13625;Name=LDO45_RS13625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13625;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000150.1 Protein Homology CDS 1 527 . - 0 ID=cds-LDO45_RS13625;Parent=gene-LDO45_RS13625;Note=too many ambiguous residues%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212714.1;locus_tag=LDO45_RS13625;partial=true;product=SDR family oxidoreductase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000150.1 RefSeq gene 582 767 . + . ID=gene-LDO45_RS13630;Name=LDO45_RS13630;end_range=767,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13630;partial=true NZ_CAJZAS010000150.1 GeneMarkS-2+ CDS 582 767 . + 0 ID=cds-WP_223962070.1;Parent=gene-LDO45_RS13630;Dbxref=GenBank:WP_223962070.1;Name=WP_223962070.1;end_range=767,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS13630;partial=true;product=hypothetical protein;protein_id=WP_223962070.1;transl_table=11 ##sequence-region NZ_CAJZAS010000151.1 1 1721 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000151.1 RefSeq region 1 1721 . + . ID=NZ_CAJZAS010000151.1:1..1721;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_234 NZ_CAJZAS010000151.1 RefSeq gene 1 1468 . + . ID=gene-LDO45_RS13635;Name=LDO45_RS13635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13635;old_locus_tag=BDI4_2340001;partial=true;start_range=.,1 NZ_CAJZAS010000151.1 Protein Homology CDS 1 1468 . + 1 ID=cds-WP_223962072.1;Parent=gene-LDO45_RS13635;Dbxref=GenBank:WP_223962072.1;Name=WP_223962072.1;Ontology_term=GO:0030244,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405017.1;locus_tag=LDO45_RS13635;partial=true;product=cellulose synthase subunit BcsC-related outer membrane protein;protein_id=WP_223962072.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000151.1 RefSeq gene 1465 1721 . - . ID=gene-LDO45_RS13640;Name=LDO45_RS13640;end_range=1721,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13640;old_locus_tag=BDI4_2340002;partial=true NZ_CAJZAS010000151.1 GeneMarkS-2+ CDS 1465 1721 . - 2 ID=cds-WP_223962075.1;Parent=gene-LDO45_RS13640;Dbxref=GenBank:WP_223962075.1;Name=WP_223962075.1;end_range=1721,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS13640;partial=true;product=hypothetical protein;protein_id=WP_223962075.1;transl_table=11 ##sequence-region NZ_CAJZAS010000152.1 1 650 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000152.1 RefSeq region 1 650 . + . ID=NZ_CAJZAS010000152.1:1..650;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_235 NZ_CAJZAS010000152.1 RefSeq pseudogene 1 187 . + . ID=gene-LDO45_RS13645;Name=LDO45_RS13645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13645;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000152.1 Protein Homology CDS 1 187 . + 1 ID=cds-LDO45_RS13645;Parent=gene-LDO45_RS13645;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762770.1;locus_tag=LDO45_RS13645;partial=true;product=manganese catalase family protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000152.1 RefSeq pseudogene 288 566 . + . ID=gene-LDO45_RS13650;Name=LDO45_RS13650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13650;pseudo=true NZ_CAJZAS010000152.1 Protein Homology CDS 288 566 . + 0 ID=cds-LDO45_RS13650;Parent=gene-LDO45_RS13650;Note=too many ambiguous residues;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493751.1;locus_tag=LDO45_RS13650;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CAJZAS010000152.1 RefSeq pseudogene 541 650 . - . ID=gene-LDO45_RS34410;Name=LDO45_RS34410;end_range=650,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34410;partial=true;pseudo=true NZ_CAJZAS010000152.1 Protein Homology CDS 541 650 . - 2 ID=cds-LDO45_RS34410;Parent=gene-LDO45_RS34410;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=650,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661429.1;locus_tag=LDO45_RS34410;partial=true;product=DUF1641 domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000153.1 1 716 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000153.1 RefSeq region 1 716 . + . ID=NZ_CAJZAS010000153.1:1..716;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_236 NZ_CAJZAS010000153.1 RefSeq pseudogene 1 211 . + . ID=gene-LDO45_RS13655;Name=LDO45_RS13655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13655;old_locus_tag=BDI4_2360001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000153.1 Protein Homology CDS 1 211 . + 1 ID=cds-LDO45_RS13655;Parent=gene-LDO45_RS13655;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328840.1;locus_tag=LDO45_RS13655;partial=true;product=MFS transporter;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000153.1 RefSeq gene 272 417 . - . ID=gene-LDO45_RS13660;Name=LDO45_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13660;old_locus_tag=BDI4_2360002;partial=true;start_range=.,272 NZ_CAJZAS010000153.1 Protein Homology CDS 272 417 . - 0 ID=cds-WP_223962079.1;Parent=gene-LDO45_RS13660;Dbxref=GenBank:WP_223962079.1;Name=WP_223962079.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401987.1;locus_tag=LDO45_RS13660;partial=true;product=oxidative damage protection protein;protein_id=WP_223962079.1;start_range=.,272;transl_table=11 NZ_CAJZAS010000153.1 RefSeq gene 467 716 . - . ID=gene-LDO45_RS13665;Name=LDO45_RS13665;end_range=716,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13665;old_locus_tag=BDI4_2360003;partial=true NZ_CAJZAS010000153.1 Protein Homology CDS 467 716 . - 1 ID=cds-WP_223962077.1;Parent=gene-LDO45_RS13665;Dbxref=GenBank:WP_223962077.1;Name=WP_223962077.1;Ontology_term=GO:0016747;end_range=716,.;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602335.1;locus_tag=LDO45_RS13665;partial=true;product=GNAT family N-acetyltransferase;protein_id=WP_223962077.1;transl_table=11 ##sequence-region NZ_CAJZAS010000154.1 1 798 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000154.1 RefSeq region 1 798 . + . ID=NZ_CAJZAS010000154.1:1..798;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_237 NZ_CAJZAS010000154.1 RefSeq pseudogene 1 448 . - . ID=gene-LDO45_RS13670;Name=LDO45_RS13670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13670;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000154.1 Protein Homology CDS 1 448 . - 0 ID=cds-LDO45_RS13670;Parent=gene-LDO45_RS13670;Note=too many ambiguous residues%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480544.1;locus_tag=LDO45_RS13670;partial=true;product=aromatic ring-hydroxylating dioxygenase subunit alpha;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000154.1 RefSeq pseudogene 589 691 . + . ID=gene-LDO45_RS13675;Name=LDO45_RS13675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13675;old_locus_tag=BDI4_2370004;partial=true;pseudo=true;start_range=.,589 NZ_CAJZAS010000154.1 Protein Homology CDS 589 691 . + 1 ID=cds-LDO45_RS13675;Parent=gene-LDO45_RS13675;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339432.1;locus_tag=LDO45_RS13675;partial=true;product=MarR family transcriptional regulator;pseudo=true;start_range=.,589;transl_table=11 ##sequence-region NZ_CAJZAS010000155.1 1 555 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000155.1 RefSeq region 1 555 . + . ID=NZ_CAJZAS010000155.1:1..555;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_238 NZ_CAJZAS010000155.1 RefSeq pseudogene 1 555 . + . ID=gene-LDO45_RS34415;Name=LDO45_RS34415;end_range=555,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34415;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000155.1 Protein Homology CDS 1 555 . + 1 ID=cds-LDO45_RS34415;Parent=gene-LDO45_RS34415;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=555,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529537.1;locus_tag=LDO45_RS34415;partial=true;product=cytochrome;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAS010000156.1 1 1333 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000156.1 RefSeq region 1 1333 . + . ID=NZ_CAJZAS010000156.1:1..1333;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_239 NZ_CAJZAS010000156.1 RefSeq gene 1 1333 . + . ID=gene-LDO45_RS13680;Name=LDO45_RS13680;end_range=1333,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13680;partial=true;start_range=.,1 NZ_CAJZAS010000156.1 Protein Homology CDS 1 1333 . + 0 ID=cds-WP_223962081.1;Parent=gene-LDO45_RS13680;Dbxref=GenBank:WP_223962081.1;Name=WP_223962081.1;Ontology_term=GO:0016627;end_range=1333,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254845.1;locus_tag=LDO45_RS13680;partial=true;product=acyl-CoA dehydrogenase family protein;protein_id=WP_223962081.1;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAS010000157.1 1 35237 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000157.1 RefSeq region 1 35237 . + . ID=NZ_CAJZAS010000157.1:1..35237;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_24 NZ_CAJZAS010000157.1 RefSeq gene 217 2340 . + . ID=gene-LDO45_RS13685;Name=LDO45_RS13685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13685;old_locus_tag=BDI4_240001 NZ_CAJZAS010000157.1 Protein Homology CDS 217 2340 . + 0 ID=cds-WP_223962083.1;Parent=gene-LDO45_RS13685;Dbxref=GenBank:WP_223962083.1;Name=WP_223962083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467483.1;locus_tag=LDO45_RS13685;product=site-specific recombinase;protein_id=WP_223962083.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 2506 3804 . + . ID=gene-LDO45_RS13690;Name=LDO45_RS13690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13690;old_locus_tag=BDI4_240002 NZ_CAJZAS010000157.1 Protein Homology CDS 2506 3804 . + 0 ID=cds-WP_059535360.1;Parent=gene-LDO45_RS13690;Dbxref=GenBank:WP_059535360.1;Name=WP_059535360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333399.1;locus_tag=LDO45_RS13690;product=class I SAM-dependent RNA methyltransferase;protein_id=WP_059535360.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 4098 4514 . + . ID=gene-LDO45_RS13695;Name=LDO45_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13695;old_locus_tag=BDI4_240003 NZ_CAJZAS010000157.1 Protein Homology CDS 4098 4514 . + 0 ID=cds-WP_223962085.1;Parent=gene-LDO45_RS13695;Dbxref=GenBank:WP_223962085.1;Name=WP_223962085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751908.1;locus_tag=LDO45_RS13695;product=VOC family protein;protein_id=WP_223962085.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 4588 5274 . + . ID=gene-LDO45_RS13700;Name=LDO45_RS13700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13700;old_locus_tag=BDI4_240004 NZ_CAJZAS010000157.1 Protein Homology CDS 4588 5274 . + 0 ID=cds-WP_059535356.1;Parent=gene-LDO45_RS13700;Dbxref=GenBank:WP_059535356.1;Name=WP_059535356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898053.1;locus_tag=LDO45_RS13700;product=YafY family protein;protein_id=WP_059535356.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 5327 6250 . - . ID=gene-LDO45_RS13705;Name=LDO45_RS13705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13705;old_locus_tag=BDI4_240005 NZ_CAJZAS010000157.1 Protein Homology CDS 5327 6250 . - 0 ID=cds-WP_223962087.1;Parent=gene-LDO45_RS13705;Dbxref=GenBank:WP_223962087.1;Name=WP_223962087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350978.1;locus_tag=LDO45_RS13705;product=carbon-nitrogen hydrolase family protein;protein_id=WP_223962087.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 6330 7250 . + . ID=gene-LDO45_RS13710;Name=LDO45_RS13710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13710;old_locus_tag=BDI4_240006 NZ_CAJZAS010000157.1 Protein Homology CDS 6330 7250 . + 0 ID=cds-WP_223962090.1;Parent=gene-LDO45_RS13710;Dbxref=GenBank:WP_223962090.1;Name=WP_223962090.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898055.1;locus_tag=LDO45_RS13710;product=LysR family transcriptional regulator;protein_id=WP_223962090.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 7439 7948 . + . ID=gene-LDO45_RS13715;Name=LDO45_RS13715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13715;old_locus_tag=BDI4_240007 NZ_CAJZAS010000157.1 Protein Homology CDS 7439 7948 . + 0 ID=cds-WP_059535350.1;Parent=gene-LDO45_RS13715;Dbxref=GenBank:WP_059535350.1;Name=WP_059535350.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194031.1;locus_tag=LDO45_RS13715;product=NUDIX hydrolase;protein_id=WP_059535350.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 7945 9108 . + . ID=gene-LDO45_RS13720;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=LDO45_RS13720;old_locus_tag=BDI4_240008 NZ_CAJZAS010000157.1 Protein Homology CDS 7945 9108 . + 0 ID=cds-WP_223962092.1;Parent=gene-LDO45_RS13720;Dbxref=GenBank:WP_223962092.1;Name=WP_223962092.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492953.1;locus_tag=LDO45_RS13720;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_223962092.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 9227 10846 . + . ID=gene-LDO45_RS13725;Name=LDO45_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13725;old_locus_tag=BDI4_240009 NZ_CAJZAS010000157.1 Protein Homology CDS 9227 10846 . + 0 ID=cds-WP_059689064.1;Parent=gene-LDO45_RS13725;Dbxref=GenBank:WP_059689064.1;Name=WP_059689064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327911.1;locus_tag=LDO45_RS13725;product=FMN-binding glutamate synthase family protein;protein_id=WP_059689064.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 10938 11549 . - . ID=gene-LDO45_RS13730;Name=LDO45_RS13730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13730;old_locus_tag=BDI4_240011 NZ_CAJZAS010000157.1 Protein Homology CDS 10938 11549 . - 0 ID=cds-WP_059535515.1;Parent=gene-LDO45_RS13730;Dbxref=GenBank:WP_059535515.1;Name=WP_059535515.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401671.1;locus_tag=LDO45_RS13730;product=glutathione S-transferase family protein;protein_id=WP_059535515.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 11738 13135 . + . ID=gene-LDO45_RS13735;Name=LDO45_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13735;old_locus_tag=BDI4_240012 NZ_CAJZAS010000157.1 Protein Homology CDS 11738 13135 . + 0 ID=cds-WP_223962094.1;Parent=gene-LDO45_RS13735;Dbxref=GenBank:WP_223962094.1;Name=WP_223962094.1;Ontology_term=GO:0030145,GO:0070006;gbkey=CDS;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751900.1;locus_tag=LDO45_RS13735;product=aminopeptidase P N-terminal domain-containing protein;protein_id=WP_223962094.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 13226 14413 . + . ID=gene-LDO45_RS13740;Name=LDO45_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13740;old_locus_tag=BDI4_240013 NZ_CAJZAS010000157.1 Protein Homology CDS 13226 14413 . + 0 ID=cds-WP_059700695.1;Parent=gene-LDO45_RS13740;Dbxref=GenBank:WP_059700695.1;Name=WP_059700695.1;Ontology_term=GO:0006744,GO:0016705,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350968.1;locus_tag=LDO45_RS13740;product=UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase;protein_id=WP_059700695.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 14558 15625 . + . ID=gene-LDO45_RS13745;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=LDO45_RS13745;old_locus_tag=BDI4_240014 NZ_CAJZAS010000157.1 Protein Homology CDS 14558 15625 . + 0 ID=cds-WP_059689065.1;Parent=gene-LDO45_RS13745;Dbxref=GenBank:WP_059689065.1;Name=WP_059689065.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401674.1;locus_tag=LDO45_RS13745;product=tRNA dihydrouridine synthase DusB;protein_id=WP_059689065.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 15622 15855 . + . ID=gene-LDO45_RS13750;Name=LDO45_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13750;old_locus_tag=BDI4_240015 NZ_CAJZAS010000157.1 Protein Homology CDS 15622 15855 . + 0 ID=cds-WP_006476892.1;Parent=gene-LDO45_RS13750;Dbxref=GenBank:WP_006476892.1;Name=WP_006476892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013436270.1;locus_tag=LDO45_RS13750;product=Fis family transcriptional regulator;protein_id=WP_006476892.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 15900 17465 . + . ID=gene-LDO45_RS13755;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=LDO45_RS13755;old_locus_tag=BDI4_240016 NZ_CAJZAS010000157.1 Protein Homology CDS 15900 17465 . + 0 ID=cds-WP_223962096.1;Parent=gene-LDO45_RS13755;Dbxref=GenBank:WP_223962096.1;Name=WP_223962096.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069295.1;locus_tag=LDO45_RS13755;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_223962096.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 17617 18159 . + . ID=gene-LDO45_RS13760;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=LDO45_RS13760;old_locus_tag=BDI4_240017 NZ_CAJZAS010000157.1 Protein Homology CDS 17617 18159 . + 0 ID=cds-WP_059465409.1;Parent=gene-LDO45_RS13760;Dbxref=GenBank:WP_059465409.1;Name=WP_059465409.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401929.1;locus_tag=LDO45_RS13760;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_059465409.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 18343 18924 . + . ID=gene-LDO45_RS13765;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=LDO45_RS13765;old_locus_tag=BDI4_240018 NZ_CAJZAS010000157.1 Protein Homology CDS 18343 18924 . + 0 ID=cds-WP_059451998.1;Parent=gene-LDO45_RS13765;Dbxref=GenBank:WP_059451998.1;Name=WP_059451998.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069298.1;locus_tag=LDO45_RS13765;product=Holliday junction branch migration protein RuvA;protein_id=WP_059451998.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 19033 20100 . + . ID=gene-LDO45_RS13770;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=LDO45_RS13770;old_locus_tag=BDI4_240019 NZ_CAJZAS010000157.1 Protein Homology CDS 19033 20100 . + 0 ID=cds-WP_059465408.1;Parent=gene-LDO45_RS13770;Dbxref=GenBank:WP_059465408.1;Name=WP_059465408.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401680.1;locus_tag=LDO45_RS13770;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_059465408.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 20125 21078 . + . ID=gene-LDO45_RS13775;Name=LDO45_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13775;old_locus_tag=BDI4_240020 NZ_CAJZAS010000157.1 Protein Homology CDS 20125 21078 . + 0 ID=cds-WP_223962098.1;Parent=gene-LDO45_RS13775;Dbxref=GenBank:WP_223962098.1;Name=WP_223962098.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350962.1;locus_tag=LDO45_RS13775;product=oxygenase MpaB family protein;protein_id=WP_223962098.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq pseudogene 21136 21264 . + . ID=gene-LDO45_RS13780;Name=LDO45_RS13780;end_range=21264,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13780;partial=true;pseudo=true;start_range=.,21136 NZ_CAJZAS010000157.1 Protein Homology CDS 21136 21264 . + 0 ID=cds-LDO45_RS13780;Parent=gene-LDO45_RS13780;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=21264,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004541213.1;locus_tag=LDO45_RS13780;partial=true;product=chromosome partitioning protein ParB;pseudo=true;start_range=.,21136;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 21332 21994 . - . ID=gene-LDO45_RS13785;Name=LDO45_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13785;old_locus_tag=BDI4_240021 NZ_CAJZAS010000157.1 Protein Homology CDS 21332 21994 . - 0 ID=cds-WP_223962100.1;Parent=gene-LDO45_RS13785;Dbxref=GenBank:WP_223962100.1;Name=WP_223962100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009903982.1;locus_tag=LDO45_RS13785;product=histidine phosphatase family protein;protein_id=WP_223962100.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 22018 22476 . - . ID=gene-LDO45_RS13790;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=LDO45_RS13790;old_locus_tag=BDI4_240022 NZ_CAJZAS010000157.1 Protein Homology CDS 22018 22476 . - 0 ID=cds-WP_006759921.1;Parent=gene-LDO45_RS13790;Dbxref=GenBank:WP_006759921.1;Name=WP_006759921.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091359.1;locus_tag=LDO45_RS13790;product=D-aminoacyl-tRNA deacylase;protein_id=WP_006759921.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 22473 23714 . - . ID=gene-LDO45_RS13795;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=LDO45_RS13795;old_locus_tag=BDI4_240023 NZ_CAJZAS010000157.1 Protein Homology CDS 22473 23714 . - 0 ID=cds-WP_059535332.1;Parent=gene-LDO45_RS13795;Dbxref=GenBank:WP_059535332.1;Name=WP_059535332.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350958.1;locus_tag=LDO45_RS13795;product=tyrosine--tRNA ligase;protein_id=WP_059535332.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 23857 25005 . + . ID=gene-LDO45_RS13800;Name=LDO45_RS13800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13800;old_locus_tag=BDI4_240024 NZ_CAJZAS010000157.1 Protein Homology CDS 23857 25005 . + 0 ID=cds-WP_059535330.1;Parent=gene-LDO45_RS13800;Dbxref=GenBank:WP_059535330.1;Name=WP_059535330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883285.1;locus_tag=LDO45_RS13800;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_059535330.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 25108 25479 . - . ID=gene-LDO45_RS13805;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=LDO45_RS13805;old_locus_tag=BDI4_240025 NZ_CAJZAS010000157.1 Protein Homology CDS 25108 25479 . - 0 ID=cds-WP_059451991.1;Parent=gene-LDO45_RS13805;Dbxref=GenBank:WP_059451991.1;Name=WP_059451991.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600516.1;locus_tag=LDO45_RS13805;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_059451991.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 25687 26079 . - . ID=gene-LDO45_RS13810;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=LDO45_RS13810;old_locus_tag=BDI4_240026 NZ_CAJZAS010000157.1 Protein Homology CDS 25687 26079 . - 0 ID=cds-WP_011883283.1;Parent=gene-LDO45_RS13810;Dbxref=GenBank:WP_011883283.1;Name=WP_011883283.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019447061.1;locus_tag=LDO45_RS13810;product=30S ribosomal protein S9;protein_id=WP_011883283.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 26091 26519 . - . ID=gene-LDO45_RS13815;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=LDO45_RS13815;old_locus_tag=BDI4_240027 NZ_CAJZAS010000157.1 Protein Homology CDS 26091 26519 . - 0 ID=cds-WP_009687896.1;Parent=gene-LDO45_RS13815;Dbxref=GenBank:WP_009687896.1;Name=WP_009687896.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008919631.1;locus_tag=LDO45_RS13815;product=50S ribosomal protein L13;protein_id=WP_009687896.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 26832 27137 . + . ID=gene-LDO45_RS13820;Name=LDO45_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13820 NZ_CAJZAS010000157.1 Protein Homology CDS 26832 27137 . + 0 ID=cds-WP_223962107.1;Parent=gene-LDO45_RS13820;Dbxref=GenBank:WP_223962107.1;Name=WP_223962107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408331.1;locus_tag=LDO45_RS13820;product=DUF1090 family protein;protein_id=WP_223962107.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 27587 28051 . + . ID=gene-LDO45_RS13825;Name=LDO45_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13825;old_locus_tag=BDI4_240029 NZ_CAJZAS010000157.1 Protein Homology CDS 27587 28051 . + 0 ID=cds-WP_082721941.1;Parent=gene-LDO45_RS13825;Dbxref=GenBank:WP_082721941.1;Name=WP_082721941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011401997.1;locus_tag=LDO45_RS13825;product=OsmC family protein;protein_id=WP_082721941.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 28122 28533 . - . ID=gene-LDO45_RS13830;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=LDO45_RS13830;old_locus_tag=BDI4_MISCRNA17 NZ_CAJZAS010000157.1 cmsearch RNase_P_RNA 28122 28533 . - . ID=rna-LDO45_RS13830;Parent=gene-LDO45_RS13830;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO45_RS13830;product=RNase P RNA component class A NZ_CAJZAS010000157.1 cmsearch exon 28122 28533 . - . ID=exon-LDO45_RS13830-1;Parent=rna-LDO45_RS13830;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO45_RS13830;product=RNase P RNA component class A NZ_CAJZAS010000157.1 RefSeq gene 28546 29424 . - . ID=gene-LDO45_RS13835;Name=LDO45_RS13835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13835;old_locus_tag=BDI4_240031 NZ_CAJZAS010000157.1 Protein Homology CDS 28546 29424 . - 0 ID=cds-WP_223962102.1;Parent=gene-LDO45_RS13835;Dbxref=GenBank:WP_223962102.1;Name=WP_223962102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214114.1;locus_tag=LDO45_RS13835;product=DUF3025 domain-containing protein;protein_id=WP_223962102.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 29421 30485 . - . ID=gene-LDO45_RS13840;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=LDO45_RS13840;old_locus_tag=BDI4_240032 NZ_CAJZAS010000157.1 Protein Homology CDS 29421 30485 . - 0 ID=cds-WP_223962104.1;Parent=gene-LDO45_RS13840;Dbxref=GenBank:WP_223962104.1;Name=WP_223962104.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333371.1;locus_tag=LDO45_RS13840;product=dihydroorotase;protein_id=WP_223962104.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 30688 31605 . + . ID=gene-LDO45_RS13845;Name=LDO45_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13845;old_locus_tag=BDI4_240033 NZ_CAJZAS010000157.1 Protein Homology CDS 30688 31605 . + 0 ID=cds-WP_059535322.1;Parent=gene-LDO45_RS13845;Dbxref=GenBank:WP_059535322.1;Name=WP_059535322.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255597.1;locus_tag=LDO45_RS13845;product=class II glutamine amidotransferase;protein_id=WP_059535322.1;transl_table=11 NZ_CAJZAS010000157.1 RefSeq gene 32204 35237 . + . ID=gene-LDO45_RS13850;Name=LDO45_RS13850;end_range=35237,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13850;partial=true NZ_CAJZAS010000157.1 Protein Homology CDS 32204 35237 . + 0 ID=cds-WP_223962106.1;Parent=gene-LDO45_RS13850;Dbxref=GenBank:WP_223962106.1;Name=WP_223962106.1;end_range=35237,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350950.1;locus_tag=LDO45_RS13850;partial=true;product=ESPR domain-containing protein;protein_id=WP_223962106.1;transl_table=11 ##sequence-region NZ_CAJZAS010000158.1 1 519 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000158.1 RefSeq region 1 519 . + . ID=NZ_CAJZAS010000158.1:1..519;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_240 NZ_CAJZAS010000158.1 RefSeq pseudogene 262 519 . + . ID=gene-LDO45_RS13860;Name=LDO45_RS13860;end_range=519,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13860;partial=true;pseudo=true NZ_CAJZAS010000158.1 Protein Homology CDS 262 519 . + 0 ID=cds-LDO45_RS13860;Parent=gene-LDO45_RS13860;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=519,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356459.1;locus_tag=LDO45_RS13860;partial=true;product=polysaccharide biosynthesis protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000159.1 1 787 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000159.1 RefSeq region 1 787 . + . ID=NZ_CAJZAS010000159.1:1..787;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_241 NZ_CAJZAS010000159.1 RefSeq gene 1 172 . - . ID=gene-LDO45_RS13865;Name=LDO45_RS13865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13865;partial=true;start_range=.,1 NZ_CAJZAS010000159.1 Protein Homology CDS 1 172 . - 0 ID=cds-WP_223962111.1;Parent=gene-LDO45_RS13865;Dbxref=GenBank:WP_223962111.1;Name=WP_223962111.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413771.1;locus_tag=LDO45_RS13865;partial=true;product=chorismate synthase;protein_id=WP_223962111.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000159.1 RefSeq gene 290 787 . - . ID=gene-LDO45_RS13870;Name=LDO45_RS13870;end_range=787,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13870;old_locus_tag=BDI4_2410002;partial=true NZ_CAJZAS010000159.1 Protein Homology CDS 290 787 . - 0 ID=cds-WP_223962109.1;Parent=gene-LDO45_RS13870;Dbxref=GenBank:WP_223962109.1;Name=WP_223962109.1;Ontology_term=GO:0016746;end_range=787,.;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363715.1;locus_tag=LDO45_RS13870;partial=true;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=WP_223962109.1;transl_table=11 ##sequence-region NZ_CAJZAS010000160.1 1 2098 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000160.1 RefSeq region 1 2098 . + . ID=NZ_CAJZAS010000160.1:1..2098;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_242 NZ_CAJZAS010000160.1 RefSeq gene 1 330 . + . ID=gene-LDO45_RS13875;Name=LDO45_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13875;partial=true;start_range=.,1 NZ_CAJZAS010000160.1 Protein Homology CDS 1 330 . + 0 ID=cds-WP_223962112.1;Parent=gene-LDO45_RS13875;Dbxref=GenBank:WP_223962112.1;Name=WP_223962112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493757.1;locus_tag=LDO45_RS13875;partial=true;product=cytochrome c oxidase subunit 3;protein_id=WP_223962112.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000160.1 RefSeq gene 327 728 . + . ID=gene-LDO45_RS13880;Name=LDO45_RS13880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13880;old_locus_tag=BDI4_2420001 NZ_CAJZAS010000160.1 Protein Homology CDS 327 728 . + 0 ID=cds-WP_223962113.1;Parent=gene-LDO45_RS13880;Dbxref=GenBank:WP_223962113.1;Name=WP_223962113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011695019.1;locus_tag=LDO45_RS13880;product=cytochrome C oxidase subunit I;protein_id=WP_223962113.1;transl_table=11 NZ_CAJZAS010000160.1 RefSeq gene 719 2098 . + . ID=gene-LDO45_RS13885;Name=LDO45_RS13885;end_range=2098,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13885;partial=true NZ_CAJZAS010000160.1 Protein Homology CDS 719 2098 . + 0 ID=cds-WP_223962114.1;Parent=gene-LDO45_RS13885;Dbxref=GenBank:WP_223962114.1;Name=WP_223962114.1;Ontology_term=GO:0009055,GO:0020037;end_range=2098,.;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336687.1;locus_tag=LDO45_RS13885;partial=true;product=cytochrome c;protein_id=WP_223962114.1;transl_table=11 ##sequence-region NZ_CAJZAS010000161.1 1 5218 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000161.1 RefSeq region 1 5218 . + . ID=NZ_CAJZAS010000161.1:1..5218;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_243 NZ_CAJZAS010000161.1 RefSeq pseudogene 1 1278 . - . ID=gene-LDO45_RS13890;Name=LDO45_RS13890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13890;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000161.1 Protein Homology CDS 1 1278 . - 0 ID=cds-LDO45_RS13890;Parent=gene-LDO45_RS13890;Note=too many ambiguous residues%3B incomplete%3B missing C-terminus;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364717.1;locus_tag=LDO45_RS13890;partial=true;product=MMPL family transporter;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000161.1 RefSeq gene 1278 1922 . - . ID=gene-LDO45_RS13895;Name=LDO45_RS13895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13895;old_locus_tag=BDI4_2430003 NZ_CAJZAS010000161.1 Protein Homology CDS 1278 1922 . - 0 ID=cds-WP_223962115.1;Parent=gene-LDO45_RS13895;Dbxref=GenBank:WP_223962115.1;Name=WP_223962115.1;Ontology_term=GO:0042953,GO:0044874,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=lipoprotein transport|0042953||IEA,lipoprotein localization to outer membrane|0044874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014618000.1;locus_tag=LDO45_RS13895;product=outer membrane lipoprotein carrier protein LolA;protein_id=WP_223962115.1;transl_table=11 NZ_CAJZAS010000161.1 RefSeq gene 1919 2893 . - . ID=gene-LDO45_RS13900;Name=LDO45_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13900;old_locus_tag=BDI4_2430004 NZ_CAJZAS010000161.1 Protein Homology CDS 1919 2893 . - 0 ID=cds-WP_059690668.1;Parent=gene-LDO45_RS13900;Dbxref=GenBank:WP_059690668.1;Name=WP_059690668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761634.1;locus_tag=LDO45_RS13900;product=acyl-CoA synthetase;protein_id=WP_059690668.1;transl_table=11 NZ_CAJZAS010000161.1 RefSeq gene 2890 4650 . - . ID=gene-LDO45_RS13905;Name=LDO45_RS13905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13905;old_locus_tag=BDI4_2430005 NZ_CAJZAS010000161.1 Protein Homology CDS 2890 4650 . - 0 ID=cds-WP_223962129.1;Parent=gene-LDO45_RS13905;Dbxref=GenBank:WP_223962129.1;Name=WP_223962129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546212.1;locus_tag=LDO45_RS13905;product=AMP-binding protein;protein_id=WP_223962129.1;transl_table=11 NZ_CAJZAS010000161.1 RefSeq pseudogene 4716 5218 . - . ID=gene-LDO45_RS13910;Name=LDO45_RS13910;end_range=5218,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13910;old_locus_tag=BDI4_2430006;partial=true;pseudo=true NZ_CAJZAS010000161.1 Protein Homology CDS 4716 5218 . - 2 ID=cds-LDO45_RS13910;Parent=gene-LDO45_RS13910;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=5218,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755108.1;locus_tag=LDO45_RS13910;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000162.1 1 1565 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000162.1 RefSeq region 1 1565 . + . ID=NZ_CAJZAS010000162.1:1..1565;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_244 NZ_CAJZAS010000162.1 RefSeq pseudogene 1 1565 . + . ID=gene-LDO45_RS13915;Name=LDO45_RS13915;end_range=1565,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13915;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000162.1 Protein Homology CDS 1 1565 . + 0 ID=cds-LDO45_RS13915;Parent=gene-LDO45_RS13915;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing N-terminus and C-terminus;end_range=1565,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213362.1;locus_tag=LDO45_RS13915;partial=true;product=amino acid adenylation domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAS010000163.1 1 512 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000163.1 RefSeq region 1 512 . + . ID=NZ_CAJZAS010000163.1:1..512;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_245 NZ_CAJZAS010000163.1 RefSeq gene 266 512 . + . ID=gene-LDO45_RS13920;Name=LDO45_RS13920;end_range=512,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13920;partial=true NZ_CAJZAS010000163.1 Protein Homology CDS 266 512 . + 0 ID=cds-WP_223962131.1;Parent=gene-LDO45_RS13920;Dbxref=GenBank:WP_223962131.1;Name=WP_223962131.1;end_range=512,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006575991.1;locus_tag=LDO45_RS13920;partial=true;product=MBL fold metallo-hydrolase;protein_id=WP_223962131.1;transl_table=11 ##sequence-region NZ_CAJZAS010000164.1 1 2183 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000164.1 RefSeq region 1 2183 . + . ID=NZ_CAJZAS010000164.1:1..2183;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_246 NZ_CAJZAS010000164.1 RefSeq gene 1 725 . - . ID=gene-LDO45_RS13925;Name=LDO45_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13925;partial=true;start_range=.,1 NZ_CAJZAS010000164.1 Protein Homology CDS 1 725 . - 0 ID=cds-WP_223962134.1;Parent=gene-LDO45_RS13925;Dbxref=GenBank:WP_223962134.1;Name=WP_223962134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657265.1;locus_tag=LDO45_RS13925;partial=true;product=DUF2182 domain-containing protein;protein_id=WP_223962134.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000164.1 RefSeq gene 756 1520 . - . ID=gene-LDO45_RS13930;Name=LDO45_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13930;old_locus_tag=BDI4_2460002 NZ_CAJZAS010000164.1 Protein Homology CDS 756 1520 . - 0 ID=cds-WP_223962136.1;Parent=gene-LDO45_RS13930;Dbxref=GenBank:WP_223962136.1;Name=WP_223962136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478517.1;locus_tag=LDO45_RS13930;product=DUF899 domain-containing protein;protein_id=WP_223962136.1;transl_table=11 NZ_CAJZAS010000164.1 RefSeq pseudogene 1634 2183 . + . ID=gene-LDO45_RS13935;Name=LDO45_RS13935;end_range=2183,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13935;partial=true;pseudo=true NZ_CAJZAS010000164.1 Protein Homology CDS 1634 2183 . + 0 ID=cds-LDO45_RS13935;Parent=gene-LDO45_RS13935;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=2183,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495565.1;locus_tag=LDO45_RS13935;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000165.1 1 1028 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000165.1 RefSeq region 1 1028 . + . ID=NZ_CAJZAS010000165.1:1..1028;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_247 NZ_CAJZAS010000165.1 RefSeq pseudogene 207 695 . - . ID=gene-LDO45_RS13940;Name=LDO45_RS13940;end_range=695,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13940;partial=true;pseudo=true NZ_CAJZAS010000165.1 Protein Homology CDS 207 695 . - 0 ID=cds-LDO45_RS13940;Parent=gene-LDO45_RS13940;Note=too many ambiguous residues%3B incomplete%3B missing N-terminus;Ontology_term=GO:0005524;end_range=695,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899772.1;locus_tag=LDO45_RS13940;partial=true;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAS010000165.1 RefSeq gene 706 1028 . - . ID=gene-LDO45_RS13945;Name=LDO45_RS13945;end_range=1028,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13945;old_locus_tag=BDI4_2470002;partial=true;start_range=.,706 NZ_CAJZAS010000165.1 Protein Homology CDS 706 1028 . - 1 ID=cds-WP_223962138.1;Parent=gene-LDO45_RS13945;Dbxref=GenBank:WP_223962138.1;Name=WP_223962138.1;Ontology_term=GO:0005524,GO:0022857;end_range=1028,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399716.1;locus_tag=LDO45_RS13945;partial=true;product=ABC transporter permease;protein_id=WP_223962138.1;start_range=.,706;transl_table=11 ##sequence-region NZ_CAJZAS010000166.1 1 846 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000166.1 RefSeq region 1 846 . + . ID=NZ_CAJZAS010000166.1:1..846;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_248 NZ_CAJZAS010000166.1 RefSeq pseudogene 1 246 . - . ID=gene-LDO45_RS34570;Name=LDO45_RS34570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34570;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000166.1 GeneMarkS-2+ CDS 1 246 . - 0 ID=cds-LDO45_RS34570;Parent=gene-LDO45_RS34570;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34570;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000166.1 RefSeq pseudogene 148 457 . + . ID=gene-LDO45_RS13955;Name=LDO45_RS13955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13955;pseudo=true NZ_CAJZAS010000166.1 Protein Homology CDS 148 457 . + 0 ID=cds-LDO45_RS13955;Parent=gene-LDO45_RS13955;Note=frameshifted%3B too many ambiguous residues;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753560.1;locus_tag=LDO45_RS13955;product=putative glycolipid-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAS010000166.1 RefSeq pseudogene 478 846 . - . ID=gene-LDO45_RS34255;Name=LDO45_RS34255;end_range=846,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34255;partial=true;pseudo=true NZ_CAJZAS010000166.1 Protein Homology CDS 478 846 . - 2 ID=cds-LDO45_RS34255;Parent=gene-LDO45_RS34255;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing N-terminus;end_range=846,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548046.1;locus_tag=LDO45_RS34255;partial=true;product=ABC transporter substrate-binding protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000167.1 1 753 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000167.1 RefSeq region 1 753 . + . ID=NZ_CAJZAS010000167.1:1..753;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_249 NZ_CAJZAS010000167.1 RefSeq pseudogene 1 290 . - . ID=gene-LDO45_RS13965;Name=LDO45_RS13965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13965;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000167.1 Protein Homology CDS 1 290 . - 0 ID=cds-LDO45_RS13965;Parent=gene-LDO45_RS13965;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529423.1;locus_tag=LDO45_RS13965;partial=true;product=cation transporter;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000167.1 RefSeq gene 333 689 . - . ID=gene-LDO45_RS13970;Name=LDO45_RS13970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13970;old_locus_tag=BDI4_2490003 NZ_CAJZAS010000167.1 Protein Homology CDS 333 689 . - 0 ID=cds-WP_059536961.1;Parent=gene-LDO45_RS13970;Dbxref=GenBank:WP_059536961.1;Name=WP_059536961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754300.1;locus_tag=LDO45_RS13970;product=DUF3175 domain-containing protein;protein_id=WP_059536961.1;transl_table=11 ##sequence-region NZ_CAJZAS010000168.1 1 57702 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000168.1 RefSeq region 1 57702 . + . ID=NZ_CAJZAS010000168.1:1..57702;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_25 NZ_CAJZAS010000168.1 RefSeq pseudogene 1 455 . - . ID=gene-LDO45_RS34575;Name=LDO45_RS34575;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34575;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000168.1 Protein Homology CDS 1 455 . - 0 ID=cds-LDO45_RS34575;Parent=gene-LDO45_RS34575;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880826.1;locus_tag=LDO45_RS34575;partial=true;product=DUF2339 domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq pseudogene 814 2223 . + . ID=gene-LDO45_RS13980;Name=LDO45_RS13980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS13980;old_locus_tag=BDI4_250003;partial=true;pseudo=true;start_range=.,814 NZ_CAJZAS010000168.1 Protein Homology CDS 814 2223 . + 0 ID=cds-LDO45_RS13980;Parent=gene-LDO45_RS13980;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004547949.1;locus_tag=LDO45_RS13980;partial=true;product=glycine betaine/L-proline ABC transporter ATP-binding protein;pseudo=true;start_range=.,814;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 2216 3112 . + . ID=gene-LDO45_RS13985;Name=choW;gbkey=Gene;gene=choW;gene_biotype=protein_coding;locus_tag=LDO45_RS13985;old_locus_tag=BDI4_250004 NZ_CAJZAS010000168.1 Protein Homology CDS 2216 3112 . + 0 ID=cds-WP_059534049.1;Parent=gene-LDO45_RS13985;Dbxref=GenBank:WP_059534049.1;Name=WP_059534049.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=choW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200833.1;locus_tag=LDO45_RS13985;product=choline ABC transporter permease subunit;protein_id=WP_059534049.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 3227 4228 . + . ID=gene-LDO45_RS13990;Name=LDO45_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13990;old_locus_tag=BDI4_250005 NZ_CAJZAS010000168.1 Protein Homology CDS 3227 4228 . + 0 ID=cds-WP_059534051.1;Parent=gene-LDO45_RS13990;Dbxref=GenBank:WP_059534051.1;Name=WP_059534051.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004539488.1;locus_tag=LDO45_RS13990;product=GlxA family transcriptional regulator;protein_id=WP_059534051.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 4338 5285 . + . ID=gene-LDO45_RS13995;Name=LDO45_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS13995;old_locus_tag=BDI4_250006 NZ_CAJZAS010000168.1 Protein Homology CDS 4338 5285 . + 0 ID=cds-WP_059534053.1;Parent=gene-LDO45_RS13995;Dbxref=GenBank:WP_059534053.1;Name=WP_059534053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354069.1;locus_tag=LDO45_RS13995;product=choline ABC transporter substrate-binding protein;protein_id=WP_059534053.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 5422 5847 . - . ID=gene-LDO45_RS14000;Name=LDO45_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14000;old_locus_tag=BDI4_250007 NZ_CAJZAS010000168.1 Protein Homology CDS 5422 5847 . - 0 ID=cds-WP_223962140.1;Parent=gene-LDO45_RS14000;Dbxref=GenBank:WP_223962140.1;Name=WP_223962140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547019.1;locus_tag=LDO45_RS14000;product=PACE efflux transporter;protein_id=WP_223962140.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 6006 6929 . + . ID=gene-LDO45_RS14005;Name=LDO45_RS14005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14005;old_locus_tag=BDI4_250008 NZ_CAJZAS010000168.1 Protein Homology CDS 6006 6929 . + 0 ID=cds-WP_223962142.1;Parent=gene-LDO45_RS14005;Dbxref=GenBank:WP_223962142.1;Name=WP_223962142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354073.1;locus_tag=LDO45_RS14005;product=LysR substrate-binding domain-containing protein;protein_id=WP_223962142.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 6979 8127 . - . ID=gene-LDO45_RS14010;Name=LDO45_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14010;old_locus_tag=BDI4_250009 NZ_CAJZAS010000168.1 Protein Homology CDS 6979 8127 . - 0 ID=cds-WP_223962144.1;Parent=gene-LDO45_RS14010;Dbxref=GenBank:WP_223962144.1;Name=WP_223962144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413019.1;locus_tag=LDO45_RS14010;product=exo-alpha-sialidase;protein_id=WP_223962144.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 8184 8453 . - . ID=gene-LDO45_RS14015;Name=LDO45_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14015;old_locus_tag=BDI4_250010 NZ_CAJZAS010000168.1 Protein Homology CDS 8184 8453 . - 0 ID=cds-WP_006749905.1;Parent=gene-LDO45_RS14015;Dbxref=GenBank:WP_006749905.1;Name=WP_006749905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724006.1;locus_tag=LDO45_RS14015;product=MoaD/ThiS family protein;protein_id=WP_006749905.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 8578 8976 . - . ID=gene-LDO45_RS14020;Name=LDO45_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14020;old_locus_tag=BDI4_250011 NZ_CAJZAS010000168.1 Protein Homology CDS 8578 8976 . - 0 ID=cds-WP_059688996.1;Parent=gene-LDO45_RS14020;Dbxref=GenBank:WP_059688996.1;Name=WP_059688996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757403.1;locus_tag=LDO45_RS14020;product=nuclear transport factor 2 family protein;protein_id=WP_059688996.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 9055 9996 . + . ID=gene-LDO45_RS14025;Name=LDO45_RS14025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14025;old_locus_tag=BDI4_250012 NZ_CAJZAS010000168.1 Protein Homology CDS 9055 9996 . + 0 ID=cds-WP_223962145.1;Parent=gene-LDO45_RS14025;Dbxref=GenBank:WP_223962145.1;Name=WP_223962145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659527.1;locus_tag=LDO45_RS14025;product=LysR substrate-binding domain-containing protein;protein_id=WP_223962145.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 10025 10714 . - . ID=gene-LDO45_RS14030;Name=LDO45_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14030;old_locus_tag=BDI4_250013 NZ_CAJZAS010000168.1 Protein Homology CDS 10025 10714 . - 0 ID=cds-WP_059702418.1;Parent=gene-LDO45_RS14030;Dbxref=GenBank:WP_059702418.1;Name=WP_059702418.1;Ontology_term=GO:0018193;gbkey=CDS;go_process=peptidyl-amino acid modification|0018193||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898461.1;locus_tag=LDO45_RS14030;product=aspartyl/asparaginyl beta-hydroxylase domain-containing protein;protein_id=WP_059702418.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 10918 11262 . + . ID=gene-LDO45_RS14035;Name=LDO45_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14035;old_locus_tag=BDI4_250015 NZ_CAJZAS010000168.1 Protein Homology CDS 10918 11262 . + 0 ID=cds-WP_223962147.1;Parent=gene-LDO45_RS14035;Dbxref=GenBank:WP_223962147.1;Name=WP_223962147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659525.1;locus_tag=LDO45_RS14035;product=DUF4148 domain-containing protein;protein_id=WP_223962147.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 11334 11609 . + . ID=gene-LDO45_RS14040;Name=LDO45_RS14040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14040;old_locus_tag=BDI4_250016 NZ_CAJZAS010000168.1 Protein Homology CDS 11334 11609 . + 0 ID=cds-WP_059689009.1;Parent=gene-LDO45_RS14040;Dbxref=GenBank:WP_059689009.1;Name=WP_059689009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749900.1;locus_tag=LDO45_RS14040;product=DUF4148 domain-containing protein;protein_id=WP_059689009.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 11881 12408 . - . ID=gene-LDO45_RS14045;Name=LDO45_RS14045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14045;old_locus_tag=BDI4_250017 NZ_CAJZAS010000168.1 Protein Homology CDS 11881 12408 . - 0 ID=cds-WP_223962149.1;Parent=gene-LDO45_RS14045;Dbxref=GenBank:WP_223962149.1;Name=WP_223962149.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749899.1;locus_tag=LDO45_RS14045;product=cytochrome b;protein_id=WP_223962149.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 12479 13930 . - . ID=gene-LDO45_RS14050;Name=LDO45_RS14050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14050;old_locus_tag=BDI4_250018 NZ_CAJZAS010000168.1 Protein Homology CDS 12479 13930 . - 0 ID=cds-WP_223962151.1;Parent=gene-LDO45_RS14050;Dbxref=GenBank:WP_223962151.1;Name=WP_223962151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690709.1;locus_tag=LDO45_RS14050;product=ATP-binding protein;protein_id=WP_223962151.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 13927 14586 . - . ID=gene-LDO45_RS14055;Name=LDO45_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14055;old_locus_tag=BDI4_250019 NZ_CAJZAS010000168.1 Protein Homology CDS 13927 14586 . - 0 ID=cds-WP_223962153.1;Parent=gene-LDO45_RS14055;Dbxref=GenBank:WP_223962153.1;Name=WP_223962153.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014191413.1;locus_tag=LDO45_RS14055;product=response regulator;protein_id=WP_223962153.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 14819 15223 . + . ID=gene-LDO45_RS14060;Name=LDO45_RS14060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14060;old_locus_tag=BDI4_250020 NZ_CAJZAS010000168.1 GeneMarkS-2+ CDS 14819 15223 . + 0 ID=cds-WP_156441439.1;Parent=gene-LDO45_RS14060;Dbxref=GenBank:WP_156441439.1;Name=WP_156441439.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS14060;product=hypothetical protein;protein_id=WP_156441439.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 15286 16455 . + . ID=gene-LDO45_RS14065;Name=hpnI;gbkey=Gene;gene=hpnI;gene_biotype=protein_coding;locus_tag=LDO45_RS14065;old_locus_tag=BDI4_250021 NZ_CAJZAS010000168.1 Protein Homology CDS 15286 16455 . + 0 ID=cds-WP_223962155.1;Parent=gene-LDO45_RS14065;Dbxref=GenBank:WP_223962155.1;Name=WP_223962155.1;Ontology_term=GO:0016757;gbkey=CDS;gene=hpnI;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354082.1;locus_tag=LDO45_RS14065;product=bacteriohopanetetrol glucosamine biosynthesis glycosyltransferase HpnI;protein_id=WP_223962155.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 16452 17540 . + . ID=gene-LDO45_RS14070;Name=LDO45_RS14070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14070;old_locus_tag=BDI4_250022 NZ_CAJZAS010000168.1 Protein Homology CDS 16452 17540 . + 0 ID=cds-WP_059534082.1;Parent=gene-LDO45_RS14070;Dbxref=GenBank:WP_059534082.1;Name=WP_059534082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749897.1;locus_tag=LDO45_RS14070;product=lysylphosphatidylglycerol synthase domain-containing protein;protein_id=WP_059534082.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 17620 18591 . - . ID=gene-LDO45_RS14075;Name=denD;gbkey=Gene;gene=denD;gene_biotype=protein_coding;locus_tag=LDO45_RS14075;old_locus_tag=BDI4_250023 NZ_CAJZAS010000168.1 Protein Homology CDS 17620 18591 . - 0 ID=cds-WP_059702406.1;Parent=gene-LDO45_RS14075;Dbxref=GenBank:WP_059702406.1;Name=WP_059702406.1;Ontology_term=GO:0005975,GO:0016491;gbkey=CDS;gene=denD;go_function=oxidoreductase activity|0016491||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733329.1;locus_tag=LDO45_RS14075;product=D-erythronate dehydrogenase;protein_id=WP_059702406.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 18620 19396 . - . ID=gene-LDO45_RS14080;Name=otnI;gbkey=Gene;gene=otnI;gene_biotype=protein_coding;locus_tag=LDO45_RS14080;old_locus_tag=BDI4_250024 NZ_CAJZAS010000168.1 Protein Homology CDS 18620 19396 . - 0 ID=cds-WP_059688986.1;Parent=gene-LDO45_RS14080;Dbxref=GenBank:WP_059688986.1;Name=WP_059688986.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;gene=otnI;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004549750.1;locus_tag=LDO45_RS14080;product=2-oxo-tetronate isomerase;protein_id=WP_059688986.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 19457 20782 . - . ID=gene-LDO45_RS14085;Name=LDO45_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14085;old_locus_tag=BDI4_250025 NZ_CAJZAS010000168.1 Protein Homology CDS 19457 20782 . - 0 ID=cds-WP_223962157.1;Parent=gene-LDO45_RS14085;Dbxref=GenBank:WP_223962157.1;Name=WP_223962157.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331335.1;locus_tag=LDO45_RS14085;product=MFS transporter;protein_id=WP_223962157.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 20922 21560 . - . ID=gene-LDO45_RS14090;Name=LDO45_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14090;old_locus_tag=BDI4_250026 NZ_CAJZAS010000168.1 Protein Homology CDS 20922 21560 . - 0 ID=cds-WP_059534343.1;Parent=gene-LDO45_RS14090;Dbxref=GenBank:WP_059534343.1;Name=WP_059534343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766428.1;locus_tag=LDO45_RS14090;product=aldolase;protein_id=WP_059534343.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 21560 22846 . - . ID=gene-LDO45_RS14095;Name=otnK;gbkey=Gene;gene=otnK;gene_biotype=protein_coding;locus_tag=LDO45_RS14095;old_locus_tag=BDI4_250027 NZ_CAJZAS010000168.1 Protein Homology CDS 21560 22846 . - 0 ID=cds-WP_223962159.1;Parent=gene-LDO45_RS14095;Dbxref=GenBank:WP_223962159.1;Name=WP_223962159.1;Ontology_term=GO:0005975,GO:0005524,GO:0016301;gbkey=CDS;gene=otnK;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216436.1;locus_tag=LDO45_RS14095;product=3-oxo-tetronate kinase;protein_id=WP_223962159.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 22866 23756 . - . ID=gene-LDO45_RS14100;Name=ltnD;gbkey=Gene;gene=ltnD;gene_biotype=protein_coding;locus_tag=LDO45_RS14100;old_locus_tag=BDI4_250028 NZ_CAJZAS010000168.1 Protein Homology CDS 22866 23756 . - 0 ID=cds-WP_059466901.1;Parent=gene-LDO45_RS14100;Dbxref=GenBank:WP_059466901.1;Name=WP_059466901.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=ltnD;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603177.1;locus_tag=LDO45_RS14100;product=L-threonate dehydrogenase;protein_id=WP_059466901.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 23840 24544 . - . ID=gene-LDO45_RS14105;Name=LDO45_RS14105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14105;old_locus_tag=BDI4_250030 NZ_CAJZAS010000168.1 Protein Homology CDS 23840 24544 . - 0 ID=cds-WP_059534092.1;Parent=gene-LDO45_RS14105;Dbxref=GenBank:WP_059534092.1;Name=WP_059534092.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354089.1;locus_tag=LDO45_RS14105;product=FadR/GntR family transcriptional regulator;protein_id=WP_059534092.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 24752 25825 . - . ID=gene-LDO45_RS14110;Name=LDO45_RS14110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14110;old_locus_tag=BDI4_250031 NZ_CAJZAS010000168.1 Protein Homology CDS 24752 25825 . - 0 ID=cds-WP_223962161.1;Parent=gene-LDO45_RS14110;Dbxref=GenBank:WP_223962161.1;Name=WP_223962161.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489138.1;locus_tag=LDO45_RS14110;product=GlxA family transcriptional regulator;protein_id=WP_223962161.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 26087 27472 . + . ID=gene-LDO45_RS14115;Name=LDO45_RS14115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14115;old_locus_tag=BDI4_250029 NZ_CAJZAS010000168.1 Protein Homology CDS 26087 27472 . + 0 ID=cds-WP_223962163.1;Parent=gene-LDO45_RS14115;Dbxref=GenBank:WP_223962163.1;Name=WP_223962163.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009981714.1;locus_tag=LDO45_RS14115;product=L-serine ammonia-lyase;protein_id=WP_223962163.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 27488 28732 . + . ID=gene-LDO45_RS14120;Name=LDO45_RS14120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14120;old_locus_tag=BDI4_250033 NZ_CAJZAS010000168.1 Protein Homology CDS 27488 28732 . + 0 ID=cds-WP_006480591.1;Parent=gene-LDO45_RS14120;Dbxref=GenBank:WP_006480591.1;Name=WP_006480591.1;Ontology_term=GO:0046653,GO:0008115;gbkey=CDS;go_function=sarcosine oxidase activity|0008115||IEA;go_process=tetrahydrofolate metabolic process|0046653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017773687.1;locus_tag=LDO45_RS14120;product=sarcosine oxidase subunit beta family protein;protein_id=WP_006480591.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 28761 29060 . + . ID=gene-LDO45_RS14125;Name=LDO45_RS14125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14125;old_locus_tag=BDI4_250034 NZ_CAJZAS010000168.1 Protein Homology CDS 28761 29060 . + 0 ID=cds-WP_059534095.1;Parent=gene-LDO45_RS14125;Dbxref=GenBank:WP_059534095.1;Name=WP_059534095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547035.1;locus_tag=LDO45_RS14125;product=sarcosine oxidase subunit delta;protein_id=WP_059534095.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 29057 32068 . + . ID=gene-LDO45_RS14130;Name=LDO45_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14130;old_locus_tag=BDI4_250035 NZ_CAJZAS010000168.1 Protein Homology CDS 29057 32068 . + 0 ID=cds-WP_223962165.1;Parent=gene-LDO45_RS14130;Dbxref=GenBank:WP_223962165.1;Name=WP_223962165.1;Ontology_term=GO:0046653,GO:0008115;gbkey=CDS;go_function=sarcosine oxidase activity|0008115||IEA;go_process=tetrahydrofolate metabolic process|0046653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354097.1;locus_tag=LDO45_RS14130;product=sarcosine oxidase subunit alpha family protein;protein_id=WP_223962165.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 32058 32687 . + . ID=gene-LDO45_RS14135;Name=LDO45_RS14135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14135;old_locus_tag=BDI4_250036 NZ_CAJZAS010000168.1 Protein Homology CDS 32058 32687 . + 0 ID=cds-WP_059534099.1;Parent=gene-LDO45_RS14135;Dbxref=GenBank:WP_059534099.1;Name=WP_059534099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496827.1;locus_tag=LDO45_RS14135;product=sarcosine oxidase subunit gamma;protein_id=WP_059534099.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 32684 33124 . + . ID=gene-LDO45_RS14140;Name=LDO45_RS14140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14140;old_locus_tag=BDI4_250037 NZ_CAJZAS010000168.1 Protein Homology CDS 32684 33124 . + 0 ID=cds-WP_223962167.1;Parent=gene-LDO45_RS14140;Dbxref=GenBank:WP_223962167.1;Name=WP_223962167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749884.1;locus_tag=LDO45_RS14140;product=dihydroneopterin aldolase;protein_id=WP_223962167.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq pseudogene 33173 33277 . + . ID=gene-LDO45_RS14145;Name=LDO45_RS14145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS14145;partial=true;pseudo=true;start_range=.,33173 NZ_CAJZAS010000168.1 Protein Homology CDS 33173 33277 . + 0 ID=cds-LDO45_RS14145;Parent=gene-LDO45_RS14145;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543218.1;locus_tag=LDO45_RS14145;partial=true;product=LysR family transcriptional regulator;pseudo=true;start_range=.,33173;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 33345 34013 . - . ID=gene-LDO45_RS14150;Name=LDO45_RS14150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14150;old_locus_tag=BDI4_250038 NZ_CAJZAS010000168.1 Protein Homology CDS 33345 34013 . - 0 ID=cds-WP_223962169.1;Parent=gene-LDO45_RS14150;Dbxref=GenBank:WP_223962169.1;Name=WP_223962169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480599.1;locus_tag=LDO45_RS14150;product=lytic transglycosylase domain-containing protein;protein_id=WP_223962169.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 34233 35000 . - . ID=gene-LDO45_RS14155;Name=LDO45_RS14155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14155;old_locus_tag=BDI4_250039 NZ_CAJZAS010000168.1 Protein Homology CDS 34233 35000 . - 0 ID=cds-WP_059688980.1;Parent=gene-LDO45_RS14155;Dbxref=GenBank:WP_059688980.1;Name=WP_059688980.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749879.1;locus_tag=LDO45_RS14155;product=ABC transporter permease;protein_id=WP_059688980.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 34997 35938 . - . ID=gene-LDO45_RS14160;Name=LDO45_RS14160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14160;old_locus_tag=BDI4_250040 NZ_CAJZAS010000168.1 Protein Homology CDS 34997 35938 . - 0 ID=cds-WP_223962171.1;Parent=gene-LDO45_RS14160;Dbxref=GenBank:WP_223962171.1;Name=WP_223962171.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115358.1;locus_tag=LDO45_RS14160;product=ABC transporter ATP-binding protein;protein_id=WP_223962171.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 35935 37113 . - . ID=gene-LDO45_RS14165;Name=LDO45_RS14165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14165;old_locus_tag=BDI4_250041 NZ_CAJZAS010000168.1 Protein Homology CDS 35935 37113 . - 0 ID=cds-WP_223962173.1;Parent=gene-LDO45_RS14165;Dbxref=GenBank:WP_223962173.1;Name=WP_223962173.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749877.1;locus_tag=LDO45_RS14165;product=ABC transporter permease;protein_id=WP_223962173.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 37110 38033 . - . ID=gene-LDO45_RS14170;Name=LDO45_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14170;old_locus_tag=BDI4_250042 NZ_CAJZAS010000168.1 Protein Homology CDS 37110 38033 . - 0 ID=cds-WP_223962176.1;Parent=gene-LDO45_RS14170;Dbxref=GenBank:WP_223962176.1;Name=WP_223962176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411484.1;locus_tag=LDO45_RS14170;product=ABC transporter substrate-binding protein;protein_id=WP_223962176.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 38201 39130 . + . ID=gene-LDO45_RS14175;Name=LDO45_RS14175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14175;old_locus_tag=BDI4_250043 NZ_CAJZAS010000168.1 Protein Homology CDS 38201 39130 . + 0 ID=cds-WP_223962177.1;Parent=gene-LDO45_RS14175;Dbxref=GenBank:WP_223962177.1;Name=WP_223962177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898487.1;locus_tag=LDO45_RS14175;product=2-hydroxyacid dehydrogenase;protein_id=WP_223962177.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 39420 41366 . - . ID=gene-LDO45_RS14180;Name=LDO45_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14180;old_locus_tag=BDI4_250044 NZ_CAJZAS010000168.1 Protein Homology CDS 39420 41366 . - 0 ID=cds-WP_223962179.1;Parent=gene-LDO45_RS14180;Dbxref=GenBank:WP_223962179.1;Name=WP_223962179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659501.1;locus_tag=LDO45_RS14180;product=Xaa-Pro dipeptidyl-peptidase;protein_id=WP_223962179.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 41668 41970 . + . ID=gene-LDO45_RS14185;Name=LDO45_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14185;old_locus_tag=BDI4_250047 NZ_CAJZAS010000168.1 GeneMarkS-2+ CDS 41668 41970 . + 0 ID=cds-WP_156441440.1;Parent=gene-LDO45_RS14185;Dbxref=GenBank:WP_156441440.1;Name=WP_156441440.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS14185;product=hypothetical protein;protein_id=WP_156441440.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 41983 42321 . - . ID=gene-LDO45_RS14190;Name=LDO45_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14190;old_locus_tag=BDI4_250048 NZ_CAJZAS010000168.1 Protein Homology CDS 41983 42321 . - 0 ID=cds-WP_044844401.1;Parent=gene-LDO45_RS14190;Dbxref=GenBank:WP_044844401.1;Name=WP_044844401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547066.1;locus_tag=LDO45_RS14190;product=helix-turn-helix transcriptional regulator;protein_id=WP_044844401.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 42400 43305 . + . ID=gene-LDO45_RS14195;Name=LDO45_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14195;old_locus_tag=BDI4_250049 NZ_CAJZAS010000168.1 Protein Homology CDS 42400 43305 . + 0 ID=cds-WP_223962181.1;Parent=gene-LDO45_RS14195;Dbxref=GenBank:WP_223962181.1;Name=WP_223962181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415834.1;locus_tag=LDO45_RS14195;product=hypothetical protein;protein_id=WP_223962181.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 43587 43817 . + . ID=gene-LDO45_RS14200;Name=LDO45_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14200;old_locus_tag=BDI4_250050 NZ_CAJZAS010000168.1 Protein Homology CDS 43587 43817 . + 0 ID=cds-WP_059534347.1;Parent=gene-LDO45_RS14200;Dbxref=GenBank:WP_059534347.1;Name=WP_059534347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547068.1;locus_tag=LDO45_RS14200;product=hypothetical protein;protein_id=WP_059534347.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 43876 44724 . - . ID=gene-LDO45_RS14205;Name=LDO45_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14205;old_locus_tag=BDI4_250051 NZ_CAJZAS010000168.1 Protein Homology CDS 43876 44724 . - 0 ID=cds-WP_179949106.1;Parent=gene-LDO45_RS14205;Dbxref=GenBank:WP_179949106.1;Name=WP_179949106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366757.1;locus_tag=LDO45_RS14205;product=alpha/beta hydrolase family protein;protein_id=WP_179949106.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq pseudogene 44871 45005 . - . ID=gene-LDO45_RS14210;Name=LDO45_RS14210;end_range=45005,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS14210;partial=true;pseudo=true NZ_CAJZAS010000168.1 Protein Homology CDS 44871 45005 . - 0 ID=cds-LDO45_RS14210;Parent=gene-LDO45_RS14210;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=45005,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752698.1;locus_tag=LDO45_RS14210;partial=true;product=alpha/beta hydrolase;pseudo=true;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 45007 45777 . - . ID=gene-LDO45_RS14215;Name=LDO45_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14215;old_locus_tag=BDI4_250052 NZ_CAJZAS010000168.1 Protein Homology CDS 45007 45777 . - 0 ID=cds-WP_223962183.1;Parent=gene-LDO45_RS14215;Dbxref=GenBank:WP_223962183.1;Name=WP_223962183.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898499.1;locus_tag=LDO45_RS14215;product=alpha/beta hydrolase;protein_id=WP_223962183.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 45960 46556 . + . ID=gene-LDO45_RS14220;Name=LDO45_RS14220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14220;old_locus_tag=BDI4_250053 NZ_CAJZAS010000168.1 Protein Homology CDS 45960 46556 . + 0 ID=cds-WP_059534119.1;Parent=gene-LDO45_RS14220;Dbxref=GenBank:WP_059534119.1;Name=WP_059534119.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354136.1;locus_tag=LDO45_RS14220;product=TetR/AcrR family transcriptional regulator;protein_id=WP_059534119.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 46624 47055 . - . ID=gene-LDO45_RS14225;Name=LDO45_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14225;old_locus_tag=BDI4_250054 NZ_CAJZAS010000168.1 Protein Homology CDS 46624 47055 . - 0 ID=cds-WP_223962185.1;Parent=gene-LDO45_RS14225;Dbxref=GenBank:WP_223962185.1;Name=WP_223962185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481960.1;locus_tag=LDO45_RS14225;product=YciI family protein;protein_id=WP_223962185.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 47261 47491 . + . ID=gene-LDO45_RS14230;Name=LDO45_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14230;old_locus_tag=BDI4_250055 NZ_CAJZAS010000168.1 Protein Homology CDS 47261 47491 . + 0 ID=cds-WP_059534130.1;Parent=gene-LDO45_RS14230;Dbxref=GenBank:WP_059534130.1;Name=WP_059534130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481962.1;locus_tag=LDO45_RS14230;product=hypothetical protein;protein_id=WP_059534130.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 47535 48236 . - . ID=gene-LDO45_RS14235;Name=LDO45_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14235;old_locus_tag=BDI4_250057 NZ_CAJZAS010000168.1 Protein Homology CDS 47535 48236 . - 0 ID=cds-WP_059702376.1;Parent=gene-LDO45_RS14235;Dbxref=GenBank:WP_059702376.1;Name=WP_059702376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880792.1;locus_tag=LDO45_RS14235;product=MBL fold metallo-hydrolase;protein_id=WP_059702376.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 48387 49157 . - . ID=gene-LDO45_RS14240;Name=LDO45_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14240;old_locus_tag=BDI4_250058 NZ_CAJZAS010000168.1 Protein Homology CDS 48387 49157 . - 0 ID=cds-WP_059534134.1;Parent=gene-LDO45_RS14240;Dbxref=GenBank:WP_059534134.1;Name=WP_059534134.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898505.1;locus_tag=LDO45_RS14240;product=ABC transporter permease;protein_id=WP_059534134.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 49163 50107 . - . ID=gene-LDO45_RS14245;Name=LDO45_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14245;old_locus_tag=BDI4_250059 NZ_CAJZAS010000168.1 Protein Homology CDS 49163 50107 . - 0 ID=cds-WP_059702375.1;Parent=gene-LDO45_RS14245;Dbxref=GenBank:WP_059702375.1;Name=WP_059702375.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758876.1;locus_tag=LDO45_RS14245;product=ABC transporter ATP-binding protein;protein_id=WP_059702375.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 50537 50833 . + . ID=gene-LDO45_RS14250;Name=LDO45_RS14250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14250;old_locus_tag=BDI4_250061 NZ_CAJZAS010000168.1 Protein Homology CDS 50537 50833 . + 0 ID=cds-WP_059534137.1;Parent=gene-LDO45_RS14250;Dbxref=GenBank:WP_059534137.1;Name=WP_059534137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354152.1;locus_tag=LDO45_RS14250;product=cupin domain-containing protein;protein_id=WP_059534137.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 51461 53074 . + . ID=gene-LDO45_RS14255;Name=LDO45_RS14255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14255;old_locus_tag=BDI4_250062 NZ_CAJZAS010000168.1 Protein Homology CDS 51461 53074 . + 0 ID=cds-WP_223962187.1;Parent=gene-LDO45_RS14255;Dbxref=GenBank:WP_223962187.1;Name=WP_223962187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498727.1;locus_tag=LDO45_RS14255;product=DUF2957 domain-containing protein;protein_id=WP_223962187.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 53149 54402 . + . ID=gene-LDO45_RS14260;Name=LDO45_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14260;old_locus_tag=BDI4_250063 NZ_CAJZAS010000168.1 Protein Homology CDS 53149 54402 . + 0 ID=cds-WP_223962188.1;Parent=gene-LDO45_RS14260;Dbxref=GenBank:WP_223962188.1;Name=WP_223962188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898510.1;locus_tag=LDO45_RS14260;product=DUF2957 domain-containing protein;protein_id=WP_223962188.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 54476 55300 . + . ID=gene-LDO45_RS14265;Name=LDO45_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14265;old_locus_tag=BDI4_250064 NZ_CAJZAS010000168.1 Protein Homology CDS 54476 55300 . + 0 ID=cds-WP_059534144.1;Parent=gene-LDO45_RS14265;Dbxref=GenBank:WP_059534144.1;Name=WP_059534144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898511.1;locus_tag=LDO45_RS14265;product=OmpW family protein;protein_id=WP_059534144.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 55424 55927 . + . ID=gene-LDO45_RS14270;Name=LDO45_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14270;old_locus_tag=BDI4_250065 NZ_CAJZAS010000168.1 Protein Homology CDS 55424 55927 . + 0 ID=cds-WP_223962190.1;Parent=gene-LDO45_RS14270;Dbxref=GenBank:WP_223962190.1;Name=WP_223962190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904186.1;locus_tag=LDO45_RS14270;product=activator protein;protein_id=WP_223962190.1;transl_table=11 NZ_CAJZAS010000168.1 RefSeq gene 56150 57232 . + . ID=gene-LDO45_RS14275;Name=LDO45_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14275;old_locus_tag=BDI4_250067 NZ_CAJZAS010000168.1 Protein Homology CDS 56150 57232 . + 0 ID=cds-WP_223962193.1;Parent=gene-LDO45_RS14275;Dbxref=GenBank:WP_223962193.1;Name=WP_223962193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498729.1;locus_tag=LDO45_RS14275;product=hypothetical protein;protein_id=WP_223962193.1;transl_table=11 ##sequence-region NZ_CAJZAS010000169.1 1 787 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000169.1 RefSeq region 1 787 . + . ID=NZ_CAJZAS010000169.1:1..787;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_250 NZ_CAJZAS010000169.1 RefSeq gene 459 787 . + . ID=gene-LDO45_RS14285;Name=LDO45_RS14285;end_range=787,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14285;partial=true;start_range=.,459 NZ_CAJZAS010000169.1 Protein Homology CDS 459 787 . + 1 ID=cds-WP_374109535.1;Parent=gene-LDO45_RS14285;Dbxref=GenBank:WP_374109535.1;Name=WP_374109535.1;end_range=787,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755418.1;locus_tag=LDO45_RS14285;partial=true;product=PfkB family carbohydrate kinase;protein_id=WP_374109535.1;start_range=.,459;transl_table=11 ##sequence-region NZ_CAJZAS010000170.1 1 425 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000170.1 RefSeq region 1 425 . + . ID=NZ_CAJZAS010000170.1:1..425;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_251 NZ_CAJZAS010000170.1 RefSeq pseudogene 1 425 . + . ID=gene-LDO45_RS14290;Name=LDO45_RS14290;end_range=425,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS14290;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000170.1 Protein Homology CDS 1 425 . + 1 ID=cds-LDO45_RS14290;Parent=gene-LDO45_RS14290;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing N-terminus and C-terminus;end_range=425,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486177.1;locus_tag=LDO45_RS14290;partial=true;product=ABC transporter substrate-binding protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAS010000171.1 1 1112 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000171.1 RefSeq region 1 1112 . + . ID=NZ_CAJZAS010000171.1:1..1112;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_252 NZ_CAJZAS010000171.1 RefSeq pseudogene 200 1028 . + . ID=gene-LDO45_RS14295;Name=LDO45_RS14295;end_range=1028,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS14295;partial=true;pseudo=true NZ_CAJZAS010000171.1 Protein Homology CDS 200 1028 . + 0 ID=cds-LDO45_RS14295;Parent=gene-LDO45_RS14295;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006355,GO:0003677,GO:0003700;end_range=1028,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546421.1;locus_tag=LDO45_RS14295;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000172.1 1 2005 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000172.1 RefSeq region 1 2005 . + . ID=NZ_CAJZAS010000172.1:1..2005;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_253 NZ_CAJZAS010000172.1 RefSeq gene 1 567 . + . ID=gene-LDO45_RS14300;Name=LDO45_RS14300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14300;old_locus_tag=BDI4_2530001;partial=true;start_range=.,1 NZ_CAJZAS010000172.1 Protein Homology CDS 1 567 . + 0 ID=cds-WP_223962197.1;Parent=gene-LDO45_RS14300;Dbxref=GenBank:WP_223962197.1;Name=WP_223962197.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545414.1;locus_tag=LDO45_RS14300;partial=true;product=MFS transporter;protein_id=WP_223962197.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000172.1 RefSeq gene 759 1487 . - . ID=gene-LDO45_RS14305;Name=cobM;gbkey=Gene;gene=cobM;gene_biotype=protein_coding;locus_tag=LDO45_RS14305;old_locus_tag=BDI4_2530002 NZ_CAJZAS010000172.1 Protein Homology CDS 759 1487 . - 0 ID=cds-WP_059818239.1;Parent=gene-LDO45_RS14305;Dbxref=GenBank:WP_059818239.1;Name=WP_059818239.1;Ontology_term=GO:0009236,GO:0046026;gbkey=CDS;gene=cobM;go_function=precorrin-4 C11-methyltransferase activity|0046026||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755711.1;locus_tag=LDO45_RS14305;product=precorrin-4 C(11)-methyltransferase;protein_id=WP_059818239.1;transl_table=11 NZ_CAJZAS010000172.1 RefSeq gene 1530 2005 . - . ID=gene-LDO45_RS14310;Name=LDO45_RS14310;end_range=2005,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14310;old_locus_tag=BDI4_2530003;partial=true NZ_CAJZAS010000172.1 Protein Homology CDS 1530 2005 . - 2 ID=cds-WP_223962199.1;Parent=gene-LDO45_RS14310;Dbxref=GenBank:WP_223962199.1;Name=WP_223962199.1;Ontology_term=GO:0009236,GO:0016994;end_range=2005,.;gbkey=CDS;go_function=precorrin-6A reductase activity|0016994||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400061.1;locus_tag=LDO45_RS14310;partial=true;product=precorrin-6A/cobalt-precorrin-6A reductase;protein_id=WP_223962199.1;transl_table=11 ##sequence-region NZ_CAJZAS010000173.1 1 1068 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000173.1 RefSeq region 1 1068 . + . ID=NZ_CAJZAS010000173.1:1..1068;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_254 NZ_CAJZAS010000173.1 RefSeq pseudogene 1 780 . + . ID=gene-LDO45_RS14315;Name=LDO45_RS14315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS14315;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000173.1 Protein Homology CDS 1 780 . + 0 ID=cds-LDO45_RS14315;Parent=gene-LDO45_RS14315;Note=too many ambiguous residues%3B incomplete%3B missing N-terminus;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003063062.1;locus_tag=LDO45_RS14315;partial=true;product=Rieske 2Fe-2S domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAS010000174.1 1 571 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000174.1 RefSeq region 1 571 . + . ID=NZ_CAJZAS010000174.1:1..571;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_255 NZ_CAJZAS010000174.1 RefSeq pseudogene 1 390 . + . ID=gene-LDO45_RS14320;Name=LDO45_RS14320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS14320;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000174.1 Protein Homology CDS 1 390 . + 2 ID=cds-LDO45_RS14320;Parent=gene-LDO45_RS14320;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894442.1;locus_tag=LDO45_RS14320;partial=true;product=acyl transferase;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAS010000175.1 1 554 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000175.1 RefSeq region 1 554 . + . ID=NZ_CAJZAS010000175.1:1..554;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_256 NZ_CAJZAS010000175.1 RefSeq pseudogene 1 182 . - . ID=gene-LDO45_RS14325;Name=LDO45_RS14325;end_range=182,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS14325;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000175.1 Protein Homology CDS 1 182 . - 0 ID=cds-LDO45_RS14325;Parent=gene-LDO45_RS14325;Note=too many ambiguous residues%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0055085,GO:0022857;end_range=182,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546667.1;locus_tag=LDO45_RS14325;partial=true;product=MFS transporter;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000175.1 RefSeq gene 342 554 . + . ID=gene-LDO45_RS14330;Name=LDO45_RS14330;end_range=554,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14330;partial=true NZ_CAJZAS010000175.1 Protein Homology CDS 342 554 . + 0 ID=cds-WP_223962202.1;Parent=gene-LDO45_RS14330;Dbxref=GenBank:WP_223962202.1;Name=WP_223962202.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;end_range=554,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525667.1;locus_tag=LDO45_RS14330;partial=true;product=LysR family transcriptional regulator;protein_id=WP_223962202.1;transl_table=11 ##sequence-region NZ_CAJZAS010000176.1 1 669 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000176.1 RefSeq region 1 669 . + . ID=NZ_CAJZAS010000176.1:1..669;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_257 NZ_CAJZAS010000176.1 RefSeq pseudogene 1 184 . - . ID=gene-LDO45_RS14335;Name=LDO45_RS14335;end_range=184,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS14335;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000176.1 Protein Homology CDS 1 184 . - 1 ID=cds-LDO45_RS14335;Parent=gene-LDO45_RS14335;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=184,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498275.1;locus_tag=LDO45_RS14335;partial=true;product=cytochrome c oxidase subunit II;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAS010000177.1 1 976 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000177.1 RefSeq region 1 976 . + . ID=NZ_CAJZAS010000177.1:1..976;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_258 NZ_CAJZAS010000177.1 RefSeq pseudogene 1 976 . - . ID=gene-LDO45_RS14340;Name=bcsE;end_range=976,.;gbkey=Gene;gene=bcsE;gene_biotype=pseudogene;locus_tag=LDO45_RS14340;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000177.1 Protein Homology CDS 1 976 . - 0 ID=cds-LDO45_RS14340;Parent=gene-LDO45_RS14340;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing N-terminus and C-terminus;Ontology_term=GO:0035438;end_range=976,.;gbkey=CDS;gene=bcsE;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363642.1;locus_tag=LDO45_RS14340;partial=true;product=cellulose biosynthesis protein BcsE;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAS010000178.1 1 711 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000178.1 RefSeq region 1 711 . + . ID=NZ_CAJZAS010000178.1:1..711;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_259 NZ_CAJZAS010000178.1 RefSeq pseudogene 1 711 . - . ID=gene-LDO45_RS14345;Name=LDO45_RS14345;end_range=711,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS14345;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000178.1 Protein Homology CDS 1 711 . - 2 ID=cds-LDO45_RS14345;Parent=gene-LDO45_RS14345;Note=too many ambiguous residues%3B incomplete%3B missing N-terminus and C-terminus;Ontology_term=GO:0022857,GO:0016020;end_range=711,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328453.1;locus_tag=LDO45_RS14345;partial=true;product=iron chelate uptake ABC transporter family permease subunit;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_CAJZAS010000179.1 1 136181 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000179.1 RefSeq region 1 136181 . + . ID=NZ_CAJZAS010000179.1:1..136181;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_26 NZ_CAJZAS010000179.1 RefSeq gene 48 848 . - . ID=gene-LDO45_RS14350;Name=LDO45_RS14350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14350;old_locus_tag=BDI4_260001 NZ_CAJZAS010000179.1 Protein Homology CDS 48 848 . - 0 ID=cds-WP_223962204.1;Parent=gene-LDO45_RS14350;Dbxref=GenBank:WP_223962204.1;Name=WP_223962204.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762757.1;locus_tag=LDO45_RS14350;product=(Fe-S)-binding protein;protein_id=WP_223962204.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 980 1696 . + . ID=gene-LDO45_RS14355;Name=LDO45_RS14355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14355;old_locus_tag=BDI4_260002 NZ_CAJZAS010000179.1 Protein Homology CDS 980 1696 . + 0 ID=cds-WP_059690662.1;Parent=gene-LDO45_RS14355;Dbxref=GenBank:WP_059690662.1;Name=WP_059690662.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751960.1;locus_tag=LDO45_RS14355;product=FadR/GntR family transcriptional regulator;protein_id=WP_059690662.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 1921 3546 . + . ID=gene-LDO45_RS14360;Name=LDO45_RS14360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14360;old_locus_tag=BDI4_260003 NZ_CAJZAS010000179.1 Protein Homology CDS 1921 3546 . + 0 ID=cds-WP_223962205.1;Parent=gene-LDO45_RS14360;Dbxref=GenBank:WP_223962205.1;Name=WP_223962205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497399.1;locus_tag=LDO45_RS14360;product=phospholipase D family protein;protein_id=WP_223962205.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 3766 4539 . + . ID=gene-LDO45_RS14365;Name=LDO45_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14365;old_locus_tag=BDI4_260004 NZ_CAJZAS010000179.1 Protein Homology CDS 3766 4539 . + 0 ID=cds-WP_006497398.1;Parent=gene-LDO45_RS14365;Dbxref=GenBank:WP_006497398.1;Name=WP_006497398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353182.1;locus_tag=LDO45_RS14365;product=class II aldolase/adducin family protein;protein_id=WP_006497398.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 4562 5563 . - . ID=gene-LDO45_RS14370;Name=LDO45_RS14370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14370;old_locus_tag=BDI4_260005 NZ_CAJZAS010000179.1 Protein Homology CDS 4562 5563 . - 0 ID=cds-WP_374109536.1;Parent=gene-LDO45_RS14370;Dbxref=GenBank:WP_374109536.1;Name=WP_374109536.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364702.1;locus_tag=LDO45_RS14370;product=hypothetical protein;protein_id=WP_374109536.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 5650 5853 . + . ID=gene-LDO45_RS14375;Name=LDO45_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14375 NZ_CAJZAS010000179.1 GeneMarkS-2+ CDS 5650 5853 . + 0 ID=cds-WP_223962207.1;Parent=gene-LDO45_RS14375;Dbxref=GenBank:WP_223962207.1;Name=WP_223962207.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS14375;product=hypothetical protein;protein_id=WP_223962207.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 6025 6459 . + . ID=gene-LDO45_RS14380;Name=LDO45_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14380;old_locus_tag=BDI4_260006 NZ_CAJZAS010000179.1 Protein Homology CDS 6025 6459 . + 0 ID=cds-WP_223962209.1;Parent=gene-LDO45_RS14380;Dbxref=GenBank:WP_223962209.1;Name=WP_223962209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657914.1;locus_tag=LDO45_RS14380;product=CHRD domain-containing protein;protein_id=WP_223962209.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 6563 7525 . + . ID=gene-LDO45_RS14385;Name=LDO45_RS14385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14385;old_locus_tag=BDI4_260007 NZ_CAJZAS010000179.1 Protein Homology CDS 6563 7525 . + 0 ID=cds-WP_223962211.1;Parent=gene-LDO45_RS14385;Dbxref=GenBank:WP_223962211.1;Name=WP_223962211.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004541011.1;locus_tag=LDO45_RS14385;product=alpha/beta hydrolase;protein_id=WP_223962211.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 7495 8337 . - . ID=gene-LDO45_RS14390;Name=LDO45_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14390;old_locus_tag=BDI4_260008 NZ_CAJZAS010000179.1 Protein Homology CDS 7495 8337 . - 0 ID=cds-WP_059528235.1;Parent=gene-LDO45_RS14390;Dbxref=GenBank:WP_059528235.1;Name=WP_059528235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004555278.1;locus_tag=LDO45_RS14390;product=EcsC family protein;protein_id=WP_059528235.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 8445 10040 . + . ID=gene-LDO45_RS14395;Name=LDO45_RS14395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14395;old_locus_tag=BDI4_260009 NZ_CAJZAS010000179.1 Protein Homology CDS 8445 10040 . + 0 ID=cds-WP_223962213.1;Parent=gene-LDO45_RS14395;Dbxref=GenBank:WP_223962213.1;Name=WP_223962213.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406581.1;locus_tag=LDO45_RS14395;product=MDR family MFS transporter;protein_id=WP_223962213.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 10075 10521 . + . ID=gene-LDO45_RS14400;Name=LDO45_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14400;old_locus_tag=BDI4_260010 NZ_CAJZAS010000179.1 Protein Homology CDS 10075 10521 . + 0 ID=cds-WP_059528229.1;Parent=gene-LDO45_RS14400;Dbxref=GenBank:WP_059528229.1;Name=WP_059528229.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759689.1;locus_tag=LDO45_RS14400;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_059528229.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 10642 11223 . - . ID=gene-LDO45_RS14405;Name=LDO45_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14405;old_locus_tag=BDI4_260011 NZ_CAJZAS010000179.1 Protein Homology CDS 10642 11223 . - 0 ID=cds-WP_014896064.1;Parent=gene-LDO45_RS14405;Dbxref=GenBank:WP_014896064.1;Name=WP_014896064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024552.1;locus_tag=LDO45_RS14405;product=DJ-1/PfpI family protein;protein_id=WP_014896064.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 11387 12667 . - . ID=gene-LDO45_RS14410;Name=LDO45_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14410;old_locus_tag=BDI4_260012 NZ_CAJZAS010000179.1 Protein Homology CDS 11387 12667 . - 0 ID=cds-WP_223962215.1;Parent=gene-LDO45_RS14410;Dbxref=GenBank:WP_223962215.1;Name=WP_223962215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009902905.1;locus_tag=LDO45_RS14410;product=amino acid deaminase;protein_id=WP_223962215.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 12787 13719 . + . ID=gene-LDO45_RS14415;Name=LDO45_RS14415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14415;old_locus_tag=BDI4_260013 NZ_CAJZAS010000179.1 Protein Homology CDS 12787 13719 . + 0 ID=cds-WP_059528223.1;Parent=gene-LDO45_RS14415;Dbxref=GenBank:WP_059528223.1;Name=WP_059528223.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477828.1;locus_tag=LDO45_RS14415;product=MurR/RpiR family transcriptional regulator;protein_id=WP_059528223.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 13722 15203 . + . ID=gene-LDO45_RS14420;Name=LDO45_RS14420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14420;old_locus_tag=BDI4_260014 NZ_CAJZAS010000179.1 Protein Homology CDS 13722 15203 . + 0 ID=cds-WP_223962218.1;Parent=gene-LDO45_RS14420;Dbxref=GenBank:WP_223962218.1;Name=WP_223962218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353172.1;locus_tag=LDO45_RS14420;product=amidohydrolase family protein;protein_id=WP_223962218.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 15327 15713 . + . ID=gene-LDO45_RS14425;Name=LDO45_RS14425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14425;old_locus_tag=BDI4_260015 NZ_CAJZAS010000179.1 Protein Homology CDS 15327 15713 . + 0 ID=cds-WP_006751946.1;Parent=gene-LDO45_RS14425;Dbxref=GenBank:WP_006751946.1;Name=WP_006751946.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751946.1;locus_tag=LDO45_RS14425;product=RidA family protein;protein_id=WP_006751946.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 15798 16622 . - . ID=gene-LDO45_RS14430;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=LDO45_RS14430;old_locus_tag=BDI4_260016 NZ_CAJZAS010000179.1 Protein Homology CDS 15798 16622 . - 0 ID=cds-WP_059528217.1;Parent=gene-LDO45_RS14430;Dbxref=GenBank:WP_059528217.1;Name=WP_059528217.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886006.1;locus_tag=LDO45_RS14430;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_059528217.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 16635 18158 . - . ID=gene-LDO45_RS14435;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=LDO45_RS14435;old_locus_tag=BDI4_260017 NZ_CAJZAS010000179.1 Protein Homology CDS 16635 18158 . - 0 ID=cds-WP_059528215.1;Parent=gene-LDO45_RS14435;Dbxref=GenBank:WP_059528215.1;Name=WP_059528215.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334189.1;locus_tag=LDO45_RS14435;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_059528215.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 18735 22751 . + . ID=gene-LDO45_RS14440;Name=LDO45_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14440;old_locus_tag=BDI4_260018 NZ_CAJZAS010000179.1 Protein Homology CDS 18735 22751 . + 0 ID=cds-WP_059528212.1;Parent=gene-LDO45_RS14440;Dbxref=GenBank:WP_059528212.1;Name=WP_059528212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543744.1;locus_tag=LDO45_RS14440;product=DUF3683 domain-containing protein;protein_id=WP_059528212.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 22839 23282 . + . ID=gene-LDO45_RS14445;Name=LDO45_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14445;old_locus_tag=BDI4_260019 NZ_CAJZAS010000179.1 Protein Homology CDS 22839 23282 . + 0 ID=cds-WP_044846840.1;Parent=gene-LDO45_RS14445;Dbxref=GenBank:WP_044846840.1;Name=WP_044846840.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657904.1;locus_tag=LDO45_RS14445;product=HIT family protein;protein_id=WP_044846840.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 23279 23692 . + . ID=gene-LDO45_RS14450;Name=LDO45_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14450;old_locus_tag=BDI4_260020 NZ_CAJZAS010000179.1 Protein Homology CDS 23279 23692 . + 0 ID=cds-WP_011886002.1;Parent=gene-LDO45_RS14450;Dbxref=GenBank:WP_011886002.1;Name=WP_011886002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487879.1;locus_tag=LDO45_RS14450;product=gamma-butyrobetaine hydroxylase-like domain-containing protein;protein_id=WP_011886002.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 23745 24476 . + . ID=gene-LDO45_RS14455;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=LDO45_RS14455;old_locus_tag=BDI4_260021 NZ_CAJZAS010000179.1 Protein Homology CDS 23745 24476 . + 0 ID=cds-WP_059528209.1;Parent=gene-LDO45_RS14455;Dbxref=GenBank:WP_059528209.1;Name=WP_059528209.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546189.1;locus_tag=LDO45_RS14455;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_059528209.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 24518 25552 . + . ID=gene-LDO45_RS14460;Name=LDO45_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14460;old_locus_tag=BDI4_260022 NZ_CAJZAS010000179.1 Protein Homology CDS 24518 25552 . + 0 ID=cds-WP_059528206.1;Parent=gene-LDO45_RS14460;Dbxref=GenBank:WP_059528206.1;Name=WP_059528206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546188.1;locus_tag=LDO45_RS14460;product=Tim44 domain-containing protein;protein_id=WP_059528206.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 25716 26342 . + . ID=gene-LDO45_RS14465;Name=LDO45_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14465;old_locus_tag=BDI4_260023 NZ_CAJZAS010000179.1 Protein Homology CDS 25716 26342 . + 0 ID=cds-WP_059528203.1;Parent=gene-LDO45_RS14465;Dbxref=GenBank:WP_059528203.1;Name=WP_059528203.1;Ontology_term=GO:0032934;gbkey=CDS;go_function=sterol binding|0032934||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761590.1;locus_tag=LDO45_RS14465;product=SCP2 domain-containing protein;protein_id=WP_059528203.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 26355 27932 . + . ID=gene-LDO45_RS14470;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=LDO45_RS14470;old_locus_tag=BDI4_260025 NZ_CAJZAS010000179.1 Protein Homology CDS 26355 27932 . + 0 ID=cds-WP_059528200.1;Parent=gene-LDO45_RS14470;Dbxref=GenBank:WP_059528200.1;Name=WP_059528200.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477840.1;locus_tag=LDO45_RS14470;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_059528200.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 27950 28576 . + . ID=gene-LDO45_RS14475;Name=LDO45_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14475;old_locus_tag=BDI4_260026 NZ_CAJZAS010000179.1 Protein Homology CDS 27950 28576 . + 0 ID=cds-WP_223962220.1;Parent=gene-LDO45_RS14475;Dbxref=GenBank:WP_223962220.1;Name=WP_223962220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751503.1;locus_tag=LDO45_RS14475;product=TPMT family class I SAM-dependent methyltransferase;protein_id=WP_223962220.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 28672 29010 . + . ID=gene-LDO45_RS14480;Name=LDO45_RS14480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14480;old_locus_tag=BDI4_260027 NZ_CAJZAS010000179.1 Protein Homology CDS 28672 29010 . + 0 ID=cds-WP_059690654.1;Parent=gene-LDO45_RS14480;Dbxref=GenBank:WP_059690654.1;Name=WP_059690654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497387.1;locus_tag=LDO45_RS14480;product=FmdB family zinc ribbon protein;protein_id=WP_059690654.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 29072 29722 . + . ID=gene-LDO45_RS14485;Name=LDO45_RS14485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14485;old_locus_tag=BDI4_260028 NZ_CAJZAS010000179.1 Protein Homology CDS 29072 29722 . + 0 ID=cds-WP_006477842.1;Parent=gene-LDO45_RS14485;Dbxref=GenBank:WP_006477842.1;Name=WP_006477842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024570.1;locus_tag=LDO45_RS14485;product=DUF502 domain-containing protein;protein_id=WP_006477842.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 29790 31592 . + . ID=gene-LDO45_RS14490;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=LDO45_RS14490;old_locus_tag=BDI4_260029 NZ_CAJZAS010000179.1 Protein Homology CDS 29790 31592 . + 0 ID=cds-WP_059528194.1;Parent=gene-LDO45_RS14490;Dbxref=GenBank:WP_059528194.1;Name=WP_059528194.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024571.1;locus_tag=LDO45_RS14490;product=aspartate--tRNA ligase;protein_id=WP_059528194.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 31749 32243 . + . ID=gene-LDO45_RS14495;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=LDO45_RS14495;old_locus_tag=BDI4_260030 NZ_CAJZAS010000179.1 Protein Homology CDS 31749 32243 . + 0 ID=cds-WP_059528191.1;Parent=gene-LDO45_RS14495;Dbxref=GenBank:WP_059528191.1;Name=WP_059528191.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364686.1;locus_tag=LDO45_RS14495;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_059528191.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 32240 33514 . + . ID=gene-LDO45_RS14500;Name=clsB;gbkey=Gene;gene=clsB;gene_biotype=protein_coding;locus_tag=LDO45_RS14500;old_locus_tag=BDI4_260031 NZ_CAJZAS010000179.1 Protein Homology CDS 32240 33514 . + 0 ID=cds-WP_223962222.1;Parent=gene-LDO45_RS14500;Dbxref=GenBank:WP_223962222.1;Name=WP_223962222.1;Ontology_term=GO:0032049,GO:0008808;gbkey=CDS;gene=clsB;go_function=cardiolipin synthase activity|0008808||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189031.1;locus_tag=LDO45_RS14500;product=cardiolipin synthase ClsB;protein_id=WP_223962222.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 33714 34313 . + . ID=gene-LDO45_RS14505;Name=LDO45_RS14505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14505;old_locus_tag=BDI4_260032 NZ_CAJZAS010000179.1 Protein Homology CDS 33714 34313 . + 0 ID=cds-WP_006751498.1;Parent=gene-LDO45_RS14505;Dbxref=GenBank:WP_006751498.1;Name=WP_006751498.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006047961.1;locus_tag=LDO45_RS14505;product=TetR/AcrR family transcriptional regulator;protein_id=WP_006751498.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 34372 36159 . + . ID=gene-LDO45_RS14510;Name=LDO45_RS14510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14510;old_locus_tag=BDI4_260033 NZ_CAJZAS010000179.1 Protein Homology CDS 34372 36159 . + 0 ID=cds-WP_059690653.1;Parent=gene-LDO45_RS14510;Dbxref=GenBank:WP_059690653.1;Name=WP_059690653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017772699.1;locus_tag=LDO45_RS14510;product=acyl-CoA dehydrogenase C-terminal domain-containing protein;protein_id=WP_059690653.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 36273 38708 . + . ID=gene-LDO45_RS14515;Name=LDO45_RS14515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14515;old_locus_tag=BDI4_260034 NZ_CAJZAS010000179.1 Protein Homology CDS 36273 38708 . + 0 ID=cds-WP_124900921.1;Parent=gene-LDO45_RS14515;Dbxref=GenBank:WP_124900921.1;Name=WP_124900921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004537876.1;locus_tag=LDO45_RS14515;product=3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein;protein_id=WP_124900921.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 38731 39930 . + . ID=gene-LDO45_RS14520;Name=LDO45_RS14520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14520;old_locus_tag=BDI4_260035 NZ_CAJZAS010000179.1 Protein Homology CDS 38731 39930 . + 0 ID=cds-WP_059690651.1;Parent=gene-LDO45_RS14520;Dbxref=GenBank:WP_059690651.1;Name=WP_059690651.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353151.1;locus_tag=LDO45_RS14520;product=acetyl-CoA C-acyltransferase;protein_id=WP_059690651.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 40021 40788 . + . ID=gene-LDO45_RS14525;Name=LDO45_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14525;old_locus_tag=BDI4_260036 NZ_CAJZAS010000179.1 Protein Homology CDS 40021 40788 . + 0 ID=cds-WP_059820386.1;Parent=gene-LDO45_RS14525;Dbxref=GenBank:WP_059820386.1;Name=WP_059820386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406562.1;locus_tag=LDO45_RS14525;product=enoyl-CoA hydratase;protein_id=WP_059820386.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 40811 41641 . - . ID=gene-LDO45_RS14530;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=LDO45_RS14530;old_locus_tag=BDI4_260037 NZ_CAJZAS010000179.1 Protein Homology CDS 40811 41641 . - 0 ID=cds-WP_156437250.1;Parent=gene-LDO45_RS14530;Dbxref=GenBank:WP_156437250.1;Name=WP_156437250.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415971.1;locus_tag=LDO45_RS14530;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_156437250.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 41755 42237 . + . ID=gene-LDO45_RS14535;Name=LDO45_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14535;old_locus_tag=BDI4_260038 NZ_CAJZAS010000179.1 Protein Homology CDS 41755 42237 . + 0 ID=cds-WP_059528173.1;Parent=gene-LDO45_RS14535;Dbxref=GenBank:WP_059528173.1;Name=WP_059528173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406561.1;locus_tag=LDO45_RS14535;product=nitrate reductase associated protein;protein_id=WP_059528173.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 42275 42670 . - . ID=gene-LDO45_RS14540;Name=LDO45_RS14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14540;old_locus_tag=BDI4_260039 NZ_CAJZAS010000179.1 Protein Homology CDS 42275 42670 . - 0 ID=cds-WP_059528170.1;Parent=gene-LDO45_RS14540;Dbxref=GenBank:WP_059528170.1;Name=WP_059528170.1;Ontology_term=GO:0047617;gbkey=CDS;go_function=fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723611.1;locus_tag=LDO45_RS14540;product=acyl-CoA thioesterase;protein_id=WP_059528170.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 42847 44718 . + . ID=gene-LDO45_RS14545;Name=LDO45_RS14545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14545;old_locus_tag=BDI4_260040 NZ_CAJZAS010000179.1 Protein Homology CDS 42847 44718 . + 0 ID=cds-WP_059528167.1;Parent=gene-LDO45_RS14545;Dbxref=GenBank:WP_059528167.1;Name=WP_059528167.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896097.1;locus_tag=LDO45_RS14545;product=ABC transporter ATP-binding protein/permease;protein_id=WP_059528167.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 44929 45651 . - . ID=gene-LDO45_RS14550;Name=murU;gbkey=Gene;gene=murU;gene_biotype=protein_coding;locus_tag=LDO45_RS14550;old_locus_tag=BDI4_260041 NZ_CAJZAS010000179.1 Protein Homology CDS 44929 45651 . - 0 ID=cds-WP_223962224.1;Parent=gene-LDO45_RS14550;Dbxref=GenBank:WP_223962224.1;Name=WP_223962224.1;Ontology_term=GO:0009252,GO:0016779;gbkey=CDS;gene=murU;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896098.1;locus_tag=LDO45_RS14550;product=N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU;protein_id=WP_223962224.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 45674 46723 . - . ID=gene-LDO45_RS14555;Name=LDO45_RS14555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14555;old_locus_tag=BDI4_260042 NZ_CAJZAS010000179.1 Protein Homology CDS 45674 46723 . - 0 ID=cds-WP_223962226.1;Parent=gene-LDO45_RS14555;Dbxref=GenBank:WP_223962226.1;Name=WP_223962226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010114048.1;locus_tag=LDO45_RS14555;product=aminoglycoside phosphotransferase family protein;protein_id=WP_223962226.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 46947 49307 . + . ID=gene-LDO45_RS14560;Name=LDO45_RS14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14560;old_locus_tag=BDI4_260043 NZ_CAJZAS010000179.1 Protein Homology CDS 46947 49307 . + 0 ID=cds-WP_223962227.1;Parent=gene-LDO45_RS14560;Dbxref=GenBank:WP_223962227.1;Name=WP_223962227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546173.1;locus_tag=LDO45_RS14560;product=LPS-assembly protein LptD;protein_id=WP_223962227.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 49359 50717 . + . ID=gene-LDO45_RS14565;Name=LDO45_RS14565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14565;old_locus_tag=BDI4_260044 NZ_CAJZAS010000179.1 Protein Homology CDS 49359 50717 . + 0 ID=cds-WP_059528154.1;Parent=gene-LDO45_RS14565;Dbxref=GenBank:WP_059528154.1;Name=WP_059528154.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757836.1;locus_tag=LDO45_RS14565;product=peptidylprolyl isomerase;protein_id=WP_059528154.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 50729 51718 . + . ID=gene-LDO45_RS14570;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=LDO45_RS14570;old_locus_tag=BDI4_260045 NZ_CAJZAS010000179.1 Protein Homology CDS 50729 51718 . + 0 ID=cds-WP_223962228.1;Parent=gene-LDO45_RS14570;Dbxref=GenBank:WP_223962228.1;Name=WP_223962228.1;Ontology_term=GO:0042823,GO:0050570,GO:0051287;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885973.1;locus_tag=LDO45_RS14570;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_223962228.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 51774 52604 . + . ID=gene-LDO45_RS14575;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=LDO45_RS14575;old_locus_tag=BDI4_260046 NZ_CAJZAS010000179.1 Protein Homology CDS 51774 52604 . + 0 ID=cds-WP_059690644.1;Parent=gene-LDO45_RS14575;Dbxref=GenBank:WP_059690644.1;Name=WP_059690644.1;Ontology_term=GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896103.1;locus_tag=LDO45_RS14575;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_059690644.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq pseudogene 52738 53670 . - . ID=gene-LDO45_RS14580;Name=LDO45_RS14580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS14580;old_locus_tag=BDI4_260047;partial=true;pseudo=true;start_range=.,52738 NZ_CAJZAS010000179.1 Protein Homology CDS 52738 53670 . - 0 ID=cds-LDO45_RS14580;Parent=gene-LDO45_RS14580;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491616.1;locus_tag=LDO45_RS14580;partial=true;product=DMT family transporter;pseudo=true;start_range=.,52738;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 54029 54418 . + . ID=gene-LDO45_RS14585;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=LDO45_RS14585;old_locus_tag=BDI4_260048 NZ_CAJZAS010000179.1 Protein Homology CDS 54029 54418 . + 0 ID=cds-WP_223962229.1;Parent=gene-LDO45_RS14585;Dbxref=GenBank:WP_223962229.1;Name=WP_223962229.1;Ontology_term=GO:0051596,GO:0004462,GO:0046872;gbkey=CDS;gene=gloA;go_function=lactoylglutathione lyase activity|0004462||IEA,metal ion binding|0046872||IEA;go_process=methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090736.1;locus_tag=LDO45_RS14585;product=lactoylglutathione lyase;protein_id=WP_223962229.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 54527 55435 . - . ID=gene-LDO45_RS14590;Name=LDO45_RS14590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14590;old_locus_tag=BDI4_260049 NZ_CAJZAS010000179.1 Protein Homology CDS 54527 55435 . - 0 ID=cds-WP_059820423.1;Parent=gene-LDO45_RS14590;Dbxref=GenBank:WP_059820423.1;Name=WP_059820423.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398328.1;locus_tag=LDO45_RS14590;product=M48 family metallopeptidase;protein_id=WP_059820423.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 55482 56246 . - . ID=gene-LDO45_RS14595;Name=LDO45_RS14595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14595;old_locus_tag=BDI4_260050 NZ_CAJZAS010000179.1 Protein Homology CDS 55482 56246 . - 0 ID=cds-WP_059528144.1;Parent=gene-LDO45_RS14595;Dbxref=GenBank:WP_059528144.1;Name=WP_059528144.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398329.1;locus_tag=LDO45_RS14595;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=WP_059528144.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 56290 56853 . - . ID=gene-LDO45_RS14600;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=LDO45_RS14600;old_locus_tag=BDI4_260051 NZ_CAJZAS010000179.1 Protein Homology CDS 56290 56853 . - 0 ID=cds-WP_059528142.1;Parent=gene-LDO45_RS14600;Dbxref=GenBank:WP_059528142.1;Name=WP_059528142.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010101763.1;locus_tag=LDO45_RS14600;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_059528142.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 56864 58963 . - . ID=gene-LDO45_RS14605;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=LDO45_RS14605;old_locus_tag=BDI4_260052 NZ_CAJZAS010000179.1 Protein Homology CDS 56864 58963 . - 0 ID=cds-WP_059701726.1;Parent=gene-LDO45_RS14605;Dbxref=GenBank:WP_059701726.1;Name=WP_059701726.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009963525.1;locus_tag=LDO45_RS14605;product=glycine--tRNA ligase subunit beta;protein_id=WP_059701726.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 58986 59990 . - . ID=gene-LDO45_RS14610;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=LDO45_RS14610;old_locus_tag=BDI4_260053 NZ_CAJZAS010000179.1 Protein Homology CDS 58986 59990 . - 0 ID=cds-WP_080294533.1;Parent=gene-LDO45_RS14610;Dbxref=GenBank:WP_080294533.1;Name=WP_080294533.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896110.1;locus_tag=LDO45_RS14610;product=glycine--tRNA ligase subunit alpha;protein_id=WP_080294533.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 60335 61972 . + . ID=gene-LDO45_RS14615;Name=LDO45_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14615;old_locus_tag=BDI4_260054 NZ_CAJZAS010000179.1 Protein Homology CDS 60335 61972 . + 0 ID=cds-WP_223962230.1;Parent=gene-LDO45_RS14615;Dbxref=GenBank:WP_223962230.1;Name=WP_223962230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353133.1;locus_tag=LDO45_RS14615;product=tetratricopeptide repeat protein;protein_id=WP_223962230.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 62010 63701 . - . ID=gene-LDO45_RS14620;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=LDO45_RS14620;old_locus_tag=BDI4_260055 NZ_CAJZAS010000179.1 Protein Homology CDS 62010 63701 . - 0 ID=cds-WP_223962231.1;Parent=gene-LDO45_RS14620;Dbxref=GenBank:WP_223962231.1;Name=WP_223962231.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497374.1;locus_tag=LDO45_RS14620;product=apolipoprotein N-acyltransferase;protein_id=WP_223962231.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 63754 64641 . - . ID=gene-LDO45_RS14625;Name=LDO45_RS14625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14625;old_locus_tag=BDI4_260056 NZ_CAJZAS010000179.1 Protein Homology CDS 63754 64641 . - 0 ID=cds-WP_059447841.1;Parent=gene-LDO45_RS14625;Dbxref=GenBank:WP_059447841.1;Name=WP_059447841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024598.1;locus_tag=LDO45_RS14625;product=HlyC/CorC family transporter;protein_id=WP_059447841.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 64928 65077 . - . ID=gene-LDO45_RS14630;Name=LDO45_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14630 NZ_CAJZAS010000179.1 Protein Homology CDS 64928 65077 . - 0 ID=cds-WP_179949148.1;Parent=gene-LDO45_RS14630;Dbxref=GenBank:WP_179949148.1;Name=WP_179949148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497373.1;locus_tag=LDO45_RS14630;product=hypothetical protein;protein_id=WP_179949148.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 65131 65763 . - . ID=gene-LDO45_RS14635;Name=LDO45_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14635;old_locus_tag=BDI4_260057 NZ_CAJZAS010000179.1 Protein Homology CDS 65131 65763 . - 0 ID=cds-WP_059701730.1;Parent=gene-LDO45_RS14635;Dbxref=GenBank:WP_059701730.1;Name=WP_059701730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486595.1;locus_tag=LDO45_RS14635;product=gamma-glutamylcyclotransferase;protein_id=WP_059701730.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 65777 66562 . - . ID=gene-LDO45_RS14640;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=LDO45_RS14640;old_locus_tag=BDI4_260058 NZ_CAJZAS010000179.1 Protein Homology CDS 65777 66562 . - 0 ID=cds-WP_059528125.1;Parent=gene-LDO45_RS14640;Dbxref=GenBank:WP_059528125.1;Name=WP_059528125.1;gbkey=CDS;gene=ybeY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755526.1;locus_tag=LDO45_RS14640;product=rRNA maturation RNase YbeY;protein_id=WP_059528125.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 66715 67761 . - . ID=gene-LDO45_RS14645;Name=LDO45_RS14645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14645;old_locus_tag=BDI4_260059 NZ_CAJZAS010000179.1 Protein Homology CDS 66715 67761 . - 0 ID=cds-WP_059528122.1;Parent=gene-LDO45_RS14645;Dbxref=GenBank:WP_059528122.1;Name=WP_059528122.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885959.1;locus_tag=LDO45_RS14645;product=PhoH family protein;protein_id=WP_059528122.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 67795 69168 . - . ID=gene-LDO45_RS14650;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=LDO45_RS14650;old_locus_tag=BDI4_260060 NZ_CAJZAS010000179.1 Protein Homology CDS 67795 69168 . - 0 ID=cds-WP_059528119.1;Parent=gene-LDO45_RS14650;Dbxref=GenBank:WP_059528119.1;Name=WP_059528119.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896118.1;locus_tag=LDO45_RS14650;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_059528119.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 69425 70357 . - . ID=gene-LDO45_RS14655;Name=LDO45_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14655;old_locus_tag=BDI4_260062 NZ_CAJZAS010000179.1 Protein Homology CDS 69425 70357 . - 0 ID=cds-WP_059528117.1;Parent=gene-LDO45_RS14655;Dbxref=GenBank:WP_059528117.1;Name=WP_059528117.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364658.1;locus_tag=LDO45_RS14655;product=LysR family transcriptional regulator;protein_id=WP_059528117.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 70387 70572 . - . ID=gene-LDO45_RS14660;Name=LDO45_RS14660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14660 NZ_CAJZAS010000179.1 GeneMarkS-2+ CDS 70387 70572 . - 0 ID=cds-WP_162499717.1;Parent=gene-LDO45_RS14660;Dbxref=GenBank:WP_162499717.1;Name=WP_162499717.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS14660;product=hypothetical protein;protein_id=WP_162499717.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 70505 71680 . + . ID=gene-LDO45_RS14665;Name=LDO45_RS14665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14665;old_locus_tag=BDI4_260061 NZ_CAJZAS010000179.1 Protein Homology CDS 70505 71680 . + 0 ID=cds-WP_175910678.1;Parent=gene-LDO45_RS14665;Dbxref=GenBank:WP_175910678.1;Name=WP_175910678.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751296.1;locus_tag=LDO45_RS14665;product=MFS transporter;protein_id=WP_175910678.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 71893 72576 . + . ID=gene-LDO45_RS14670;Name=LDO45_RS14670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14670;old_locus_tag=BDI4_260063 NZ_CAJZAS010000179.1 Protein Homology CDS 71893 72576 . + 0 ID=cds-WP_059465738.1;Parent=gene-LDO45_RS14670;Dbxref=GenBank:WP_059465738.1;Name=WP_059465738.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751297.1;locus_tag=LDO45_RS14670;product=helix-turn-helix domain-containing protein;protein_id=WP_059465738.1;transl_table=11 NZ_CAJZAS010000179.1 cmsearch riboswitch 72759 72907 . + . ID=id-NZ_CAJZAS010000179.1:72759..72907;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAS010000179.1 RefSeq gene 73026 73736 . + . ID=gene-LDO45_RS14675;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=LDO45_RS14675;old_locus_tag=BDI4_260064 NZ_CAJZAS010000179.1 Protein Homology CDS 73026 73736 . + 0 ID=cds-WP_059528114.1;Parent=gene-LDO45_RS14675;Dbxref=GenBank:WP_059528114.1;Name=WP_059528114.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489272.1;locus_tag=LDO45_RS14675;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_059528114.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 73827 74513 . - . ID=gene-LDO45_RS14680;Name=LDO45_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14680;old_locus_tag=BDI4_260065 NZ_CAJZAS010000179.1 Protein Homology CDS 73827 74513 . - 0 ID=cds-WP_059528111.1;Parent=gene-LDO45_RS14680;Dbxref=GenBank:WP_059528111.1;Name=WP_059528111.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526142.1;locus_tag=LDO45_RS14680;product=HAD family phosphatase;protein_id=WP_059528111.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 74763 75479 . - . ID=gene-LDO45_RS14685;Name=LDO45_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14685;old_locus_tag=BDI4_260066 NZ_CAJZAS010000179.1 Protein Homology CDS 74763 75479 . - 0 ID=cds-WP_059528107.1;Parent=gene-LDO45_RS14685;Dbxref=GenBank:WP_059528107.1;Name=WP_059528107.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757965.1;locus_tag=LDO45_RS14685;product=MIP/aquaporin family protein;protein_id=WP_059528107.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 75576 77078 . - . ID=gene-LDO45_RS14690;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=LDO45_RS14690;old_locus_tag=BDI4_260067 NZ_CAJZAS010000179.1 Protein Homology CDS 75576 77078 . - 0 ID=cds-WP_223962232.1;Parent=gene-LDO45_RS14690;Dbxref=GenBank:WP_223962232.1;Name=WP_223962232.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896124.1;locus_tag=LDO45_RS14690;product=glycerol kinase GlpK;protein_id=WP_223962232.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 77184 78707 . - . ID=gene-LDO45_RS14695;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=LDO45_RS14695;old_locus_tag=BDI4_260068 NZ_CAJZAS010000179.1 Protein Homology CDS 77184 78707 . - 0 ID=cds-WP_223962234.1;Parent=gene-LDO45_RS14695;Dbxref=GenBank:WP_223962234.1;Name=WP_223962234.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546146.1;locus_tag=LDO45_RS14695;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_223962234.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 78870 79238 . + . ID=gene-LDO45_RS14700;Name=LDO45_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14700;old_locus_tag=BDI4_260069 NZ_CAJZAS010000179.1 Protein Homology CDS 78870 79238 . + 0 ID=cds-WP_059528100.1;Parent=gene-LDO45_RS14700;Dbxref=GenBank:WP_059528100.1;Name=WP_059528100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896126.1;locus_tag=LDO45_RS14700;product=hypothetical protein;protein_id=WP_059528100.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 79327 79524 . - . ID=gene-LDO45_RS14705;Name=LDO45_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14705;old_locus_tag=BDI4_260070 NZ_CAJZAS010000179.1 Protein Homology CDS 79327 79524 . - 0 ID=cds-WP_040144790.1;Parent=gene-LDO45_RS14705;Dbxref=GenBank:WP_040144790.1;Name=WP_040144790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189182.1;locus_tag=LDO45_RS14705;product=hypothetical protein;protein_id=WP_040144790.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 79827 80606 . - . ID=gene-LDO45_RS14710;Name=LDO45_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14710;old_locus_tag=BDI4_260072 NZ_CAJZAS010000179.1 Protein Homology CDS 79827 80606 . - 0 ID=cds-WP_044846783.1;Parent=gene-LDO45_RS14710;Dbxref=GenBank:WP_044846783.1;Name=WP_044846783.1;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364650.1;locus_tag=LDO45_RS14710;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_044846783.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 80830 82470 . + . ID=gene-LDO45_RS14715;Name=LDO45_RS14715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14715;old_locus_tag=BDI4_260073 NZ_CAJZAS010000179.1 Protein Homology CDS 80830 82470 . + 0 ID=cds-WP_223962236.1;Parent=gene-LDO45_RS14715;Dbxref=GenBank:WP_223962236.1;Name=WP_223962236.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212762.1;locus_tag=LDO45_RS14715;product=gamma-glutamyltransferase family protein;protein_id=WP_223962236.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 82793 83620 . + . ID=gene-LDO45_RS14720;Name=LDO45_RS14720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14720;old_locus_tag=BDI4_260074 NZ_CAJZAS010000179.1 Protein Homology CDS 82793 83620 . + 0 ID=cds-WP_059528332.1;Parent=gene-LDO45_RS14720;Dbxref=GenBank:WP_059528332.1;Name=WP_059528332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896130.1;locus_tag=LDO45_RS14720;product=ferritin-like domain-containing protein;protein_id=WP_059528332.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 83692 84198 . + . ID=gene-LDO45_RS14725;Name=LDO45_RS14725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14725;old_locus_tag=BDI4_260075 NZ_CAJZAS010000179.1 Protein Homology CDS 83692 84198 . + 0 ID=cds-WP_223962238.1;Parent=gene-LDO45_RS14725;Dbxref=GenBank:WP_223962238.1;Name=WP_223962238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090762.1;locus_tag=LDO45_RS14725;product=hypothetical protein;protein_id=WP_223962238.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 84195 85643 . - . ID=gene-LDO45_RS14730;Name=LDO45_RS14730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14730;old_locus_tag=BDI4_260076 NZ_CAJZAS010000179.1 Protein Homology CDS 84195 85643 . - 0 ID=cds-WP_059528094.1;Parent=gene-LDO45_RS14730;Dbxref=GenBank:WP_059528094.1;Name=WP_059528094.1;Ontology_term=GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398366.1;locus_tag=LDO45_RS14730;product=DEAD/DEAH box helicase;protein_id=WP_059528094.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 85738 87026 . - . ID=gene-LDO45_RS14735;Name=LDO45_RS14735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14735;old_locus_tag=BDI4_260077;partial=true;start_range=.,85738 NZ_CAJZAS010000179.1 Protein Homology CDS 85738 87026 . - 0 ID=cds-WP_223962277.1;Parent=gene-LDO45_RS14735;Dbxref=GenBank:WP_223962277.1;Name=WP_223962277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334110.1;locus_tag=LDO45_RS14735;partial=true;product=cytochrome c;protein_id=WP_223962277.1;start_range=.,85738;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 87046 87810 . - . ID=gene-LDO45_RS14740;Name=LDO45_RS14740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14740;old_locus_tag=BDI4_260078 NZ_CAJZAS010000179.1 Protein Homology CDS 87046 87810 . - 0 ID=cds-WP_059528087.1;Parent=gene-LDO45_RS14740;Dbxref=GenBank:WP_059528087.1;Name=WP_059528087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546139.1;locus_tag=LDO45_RS14740;product=c-type cytochrome;protein_id=WP_059528087.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 88188 89120 . + . ID=gene-LDO45_RS14745;Name=LDO45_RS14745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14745;old_locus_tag=BDI4_260080 NZ_CAJZAS010000179.1 Protein Homology CDS 88188 89120 . + 0 ID=cds-WP_059528083.1;Parent=gene-LDO45_RS14745;Dbxref=GenBank:WP_059528083.1;Name=WP_059528083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657850.1;locus_tag=LDO45_RS14745;product=copper resistance D family protein;protein_id=WP_059528083.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 89267 90415 . - . ID=gene-LDO45_RS14750;Name=dgoD;gbkey=Gene;gene=dgoD;gene_biotype=protein_coding;locus_tag=LDO45_RS14750;old_locus_tag=BDI4_260081 NZ_CAJZAS010000179.1 Protein Homology CDS 89267 90415 . - 0 ID=cds-WP_223962240.1;Parent=gene-LDO45_RS14750;Dbxref=GenBank:WP_223962240.1;Name=WP_223962240.1;Ontology_term=GO:0009063,GO:0008869;gbkey=CDS;gene=dgoD;go_function=galactonate dehydratase activity|0008869||IEA;go_process=amino acid catabolic process|0009063||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018437736.1;locus_tag=LDO45_RS14750;product=galactonate dehydratase;protein_id=WP_223962240.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 90535 91254 . + . ID=gene-LDO45_RS14755;Name=LDO45_RS14755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14755;old_locus_tag=BDI4_260082 NZ_CAJZAS010000179.1 Protein Homology CDS 90535 91254 . + 0 ID=cds-WP_223962241.1;Parent=gene-LDO45_RS14755;Dbxref=GenBank:WP_223962241.1;Name=WP_223962241.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398371.1;locus_tag=LDO45_RS14755;product=FadR/GntR family transcriptional regulator;protein_id=WP_223962241.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 91276 91521 . - . ID=gene-LDO45_RS14760;Name=LDO45_RS14760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14760;old_locus_tag=BDI4_260084 NZ_CAJZAS010000179.1 Protein Homology CDS 91276 91521 . - 0 ID=cds-WP_059528077.1;Parent=gene-LDO45_RS14760;Dbxref=GenBank:WP_059528077.1;Name=WP_059528077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896138.1;locus_tag=LDO45_RS14760;product=DUF1272 domain-containing protein;protein_id=WP_059528077.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 91677 92024 . + . ID=gene-LDO45_RS14765;Name=LDO45_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14765;old_locus_tag=BDI4_260083 NZ_CAJZAS010000179.1 Protein Homology CDS 91677 92024 . + 0 ID=cds-WP_059690634.1;Parent=gene-LDO45_RS14765;Dbxref=GenBank:WP_059690634.1;Name=WP_059690634.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896139.1;locus_tag=LDO45_RS14765;product=GFA family protein;protein_id=WP_059690634.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 92058 95165 . - . ID=gene-LDO45_RS14770;Name=LDO45_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14770;old_locus_tag=BDI4_260085 NZ_CAJZAS010000179.1 Protein Homology CDS 92058 95165 . - 0 ID=cds-WP_059701738.1;Parent=gene-LDO45_RS14770;Dbxref=GenBank:WP_059701738.1;Name=WP_059701738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212771.1;locus_tag=LDO45_RS14770;product=biosynthetic peptidoglycan transglycosylase;protein_id=WP_059701738.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 95566 95958 . + . ID=gene-LDO45_RS14775;Name=LDO45_RS14775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14775;old_locus_tag=BDI4_260086 NZ_CAJZAS010000179.1 Protein Homology CDS 95566 95958 . + 0 ID=cds-WP_059528067.1;Parent=gene-LDO45_RS14775;Dbxref=GenBank:WP_059528067.1;Name=WP_059528067.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353096.1;locus_tag=LDO45_RS14775;product=MAPEG family protein;protein_id=WP_059528067.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 96279 96563 . + . ID=gene-LDO45_RS14780;Name=LDO45_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14780;old_locus_tag=BDI4_260088 NZ_CAJZAS010000179.1 Protein Homology CDS 96279 96563 . + 0 ID=cds-WP_011657840.1;Parent=gene-LDO45_RS14780;Dbxref=GenBank:WP_011657840.1;Name=WP_011657840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657840.1;locus_tag=LDO45_RS14780;product=PAAR domain-containing protein;protein_id=WP_011657840.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 96573 96884 . - . ID=gene-LDO45_RS14785;Name=LDO45_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14785;old_locus_tag=BDI4_260089 NZ_CAJZAS010000179.1 Protein Homology CDS 96573 96884 . - 0 ID=cds-WP_059528060.1;Parent=gene-LDO45_RS14785;Dbxref=GenBank:WP_059528060.1;Name=WP_059528060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546132.1;locus_tag=LDO45_RS14785;product=cupin;protein_id=WP_059528060.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 96979 97662 . - . ID=gene-LDO45_RS14790;Name=LDO45_RS14790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14790;old_locus_tag=BDI4_260090 NZ_CAJZAS010000179.1 Protein Homology CDS 96979 97662 . - 0 ID=cds-WP_223962243.1;Parent=gene-LDO45_RS14790;Dbxref=GenBank:WP_223962243.1;Name=WP_223962243.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406515.1;locus_tag=LDO45_RS14790;product=DJ-1/PfpI family protein;protein_id=WP_223962243.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 97779 98747 . + . ID=gene-LDO45_RS14795;Name=LDO45_RS14795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14795;old_locus_tag=BDI4_260091 NZ_CAJZAS010000179.1 Protein Homology CDS 97779 98747 . + 0 ID=cds-WP_059528054.1;Parent=gene-LDO45_RS14795;Dbxref=GenBank:WP_059528054.1;Name=WP_059528054.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657837.1;locus_tag=LDO45_RS14795;product=GlxA family transcriptional regulator;protein_id=WP_059528054.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 98952 99926 . + . ID=gene-LDO45_RS14800;Name=LDO45_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14800;old_locus_tag=BDI4_260092 NZ_CAJZAS010000179.1 Protein Homology CDS 98952 99926 . + 0 ID=cds-WP_223962245.1;Parent=gene-LDO45_RS14800;Dbxref=GenBank:WP_223962245.1;Name=WP_223962245.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364632.1;locus_tag=LDO45_RS14800;product=LysR family transcriptional regulator;protein_id=WP_223962245.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 100193 101155 . - . ID=gene-LDO45_RS14805;Name=LDO45_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14805 NZ_CAJZAS010000179.1 Protein Homology CDS 100193 101155 . - 0 ID=cds-WP_223962247.1;Parent=gene-LDO45_RS14805;Dbxref=GenBank:WP_223962247.1;Name=WP_223962247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004548074.1;locus_tag=LDO45_RS14805;product=WYL domain-containing protein;protein_id=WP_223962247.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 101160 102578 . + . ID=gene-LDO45_RS14810;Name=LDO45_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14810;old_locus_tag=BDI4_260094 NZ_CAJZAS010000179.1 Protein Homology CDS 101160 102578 . + 0 ID=cds-WP_223962249.1;Parent=gene-LDO45_RS14810;Dbxref=GenBank:WP_223962249.1;Name=WP_223962249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009979263.1;locus_tag=LDO45_RS14810;product=Wadjet anti-phage system protein JetA family protein;protein_id=WP_223962249.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 102575 103246 . + . ID=gene-LDO45_RS14815;Name=LDO45_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14815;old_locus_tag=BDI4_260095 NZ_CAJZAS010000179.1 Protein Homology CDS 102575 103246 . + 0 ID=cds-WP_223962251.1;Parent=gene-LDO45_RS14815;Dbxref=GenBank:WP_223962251.1;Name=WP_223962251.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004537906.1;locus_tag=LDO45_RS14815;product=DUF4194 domain-containing protein;protein_id=WP_223962251.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 103243 106875 . + . ID=gene-LDO45_RS14820;Name=LDO45_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14820;old_locus_tag=BDI4_260096 NZ_CAJZAS010000179.1 Protein Homology CDS 103243 106875 . + 0 ID=cds-WP_223962253.1;Parent=gene-LDO45_RS14820;Dbxref=GenBank:WP_223962253.1;Name=WP_223962253.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004537907.1;locus_tag=LDO45_RS14820;product=SbcC/MukB-like Walker B domain-containing protein;protein_id=WP_223962253.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 106872 108005 . + . ID=gene-LDO45_RS14825;Name=LDO45_RS14825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14825;old_locus_tag=BDI4_260097 NZ_CAJZAS010000179.1 Protein Homology CDS 106872 108005 . + 0 ID=cds-WP_223962255.1;Parent=gene-LDO45_RS14825;Dbxref=GenBank:WP_223962255.1;Name=WP_223962255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003267342.1;locus_tag=LDO45_RS14825;product=Wadjet anti-phage system protein JetD domain-containing protein;protein_id=WP_223962255.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq pseudogene 108177 109319 . + . ID=gene-LDO45_RS14830;Name=LDO45_RS14830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS14830;pseudo=true NZ_CAJZAS010000179.1 Protein Homology CDS 108177 109319 . + 0 ID=cds-LDO45_RS14830;Parent=gene-LDO45_RS14830;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612266.1;locus_tag=LDO45_RS14830;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 109333 110916 . - . ID=gene-LDO45_RS14835;Name=LDO45_RS14835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14835;old_locus_tag=BDI4_260101 NZ_CAJZAS010000179.1 Protein Homology CDS 109333 110916 . - 0 ID=cds-WP_223962257.1;Parent=gene-LDO45_RS14835;Dbxref=GenBank:WP_223962257.1;Name=WP_223962257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012354422.1;locus_tag=LDO45_RS14835;product=DUF2326 domain-containing protein;protein_id=WP_223962257.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 111054 111314 . - . ID=gene-LDO45_RS14840;Name=LDO45_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14840;old_locus_tag=BDI4_260102 NZ_CAJZAS010000179.1 Protein Homology CDS 111054 111314 . - 0 ID=cds-WP_223962259.1;Parent=gene-LDO45_RS14840;Dbxref=GenBank:WP_223962259.1;Name=WP_223962259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018003931.1;locus_tag=LDO45_RS14840;product=ABC-three component system middle component 6;protein_id=WP_223962259.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 111301 112263 . - . ID=gene-LDO45_RS14845;Name=LDO45_RS14845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14845;old_locus_tag=BDI4_260103 NZ_CAJZAS010000179.1 Protein Homology CDS 111301 112263 . - 0 ID=cds-WP_223962261.1;Parent=gene-LDO45_RS14845;Dbxref=GenBank:WP_223962261.1;Name=WP_223962261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012354424.1;locus_tag=LDO45_RS14845;product=ABC-three component system protein;protein_id=WP_223962261.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 112431 112507 . - . ID=gene-LDO45_RS14850;Name=LDO45_RS14850;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS14850;old_locus_tag=BDI4_TRNA44 NZ_CAJZAS010000179.1 tRNAscan-SE tRNA 112431 112507 . - . ID=rna-LDO45_RS14850;Parent=gene-LDO45_RS14850;anticodon=(pos:complement(112471..112473));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS14850;product=tRNA-Met NZ_CAJZAS010000179.1 tRNAscan-SE exon 112431 112507 . - . ID=exon-LDO45_RS14850-1;Parent=rna-LDO45_RS14850;anticodon=(pos:complement(112471..112473));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS14850;product=tRNA-Met NZ_CAJZAS010000179.1 RefSeq gene 112630 114288 . - . ID=gene-LDO45_RS14855;Name=LDO45_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14855;old_locus_tag=BDI4_260104 NZ_CAJZAS010000179.1 Protein Homology CDS 112630 114288 . - 0 ID=cds-WP_059528048.1;Parent=gene-LDO45_RS14855;Dbxref=GenBank:WP_059528048.1;Name=WP_059528048.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546128.1;locus_tag=LDO45_RS14855;product=MFS transporter;protein_id=WP_059528048.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 114510 116063 . - . ID=gene-LDO45_RS14860;Name=LDO45_RS14860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14860;old_locus_tag=BDI4_260105 NZ_CAJZAS010000179.1 Protein Homology CDS 114510 116063 . - 0 ID=cds-WP_059528045.1;Parent=gene-LDO45_RS14860;Dbxref=GenBank:WP_059528045.1;Name=WP_059528045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896147.1;locus_tag=LDO45_RS14860;product=sensor histidine kinase;protein_id=WP_059528045.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 116081 116809 . - . ID=gene-LDO45_RS14865;Name=LDO45_RS14865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14865;old_locus_tag=BDI4_260106 NZ_CAJZAS010000179.1 Protein Homology CDS 116081 116809 . - 0 ID=cds-WP_059528042.1;Parent=gene-LDO45_RS14865;Dbxref=GenBank:WP_059528042.1;Name=WP_059528042.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334087.1;locus_tag=LDO45_RS14865;product=response regulator transcription factor;protein_id=WP_059528042.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 117000 118073 . + . ID=gene-LDO45_RS14870;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=LDO45_RS14870;old_locus_tag=BDI4_260107 NZ_CAJZAS010000179.1 Protein Homology CDS 117000 118073 . + 0 ID=cds-WP_059465716.1;Parent=gene-LDO45_RS14870;Dbxref=GenBank:WP_059465716.1;Name=WP_059465716.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189458.1;locus_tag=LDO45_RS14870;product=recombinase RecA;protein_id=WP_059465716.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 118073 118942 . + . ID=gene-LDO45_RS14875;Name=recX;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=LDO45_RS14875;old_locus_tag=BDI4_260108 NZ_CAJZAS010000179.1 Protein Homology CDS 118073 118942 . + 0 ID=cds-WP_059701749.1;Parent=gene-LDO45_RS14875;Dbxref=GenBank:WP_059701749.1;Name=WP_059701749.1;gbkey=CDS;gene=recX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398387.1;locus_tag=LDO45_RS14875;product=recombination regulator RecX;protein_id=WP_059701749.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 119089 119697 . + . ID=gene-LDO45_RS14880;Name=LDO45_RS14880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14880;old_locus_tag=BDI4_260109 NZ_CAJZAS010000179.1 Protein Homology CDS 119089 119697 . + 0 ID=cds-WP_059528036.1;Parent=gene-LDO45_RS14880;Dbxref=GenBank:WP_059528036.1;Name=WP_059528036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657830.1;locus_tag=LDO45_RS14880;product=DUF2889 domain-containing protein;protein_id=WP_059528036.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 119766 120932 . + . ID=gene-LDO45_RS14885;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=LDO45_RS14885;old_locus_tag=BDI4_260110 NZ_CAJZAS010000179.1 Protein Homology CDS 119766 120932 . + 0 ID=cds-WP_059528034.1;Parent=gene-LDO45_RS14885;Dbxref=GenBank:WP_059528034.1;Name=WP_059528034.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486694.1;locus_tag=LDO45_RS14885;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_059528034.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 120997 121878 . + . ID=gene-LDO45_RS14890;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=LDO45_RS14890;old_locus_tag=BDI4_260111 NZ_CAJZAS010000179.1 Protein Homology CDS 120997 121878 . + 0 ID=cds-WP_010090788.1;Parent=gene-LDO45_RS14890;Dbxref=GenBank:WP_010090788.1;Name=WP_010090788.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006049960.1;locus_tag=LDO45_RS14890;product=succinate--CoA ligase subunit alpha;protein_id=WP_010090788.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 122037 122741 . + . ID=gene-LDO45_RS14895;Name=LDO45_RS14895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14895;old_locus_tag=BDI4_260112 NZ_CAJZAS010000179.1 Protein Homology CDS 122037 122741 . + 0 ID=cds-WP_223962263.1;Parent=gene-LDO45_RS14895;Dbxref=GenBank:WP_223962263.1;Name=WP_223962263.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497345.1;locus_tag=LDO45_RS14895;product=TerC family protein;protein_id=WP_223962263.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 122839 123435 . + . ID=gene-LDO45_RS14900;Name=LDO45_RS14900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14900;old_locus_tag=BDI4_260113 NZ_CAJZAS010000179.1 Protein Homology CDS 122839 123435 . + 0 ID=cds-WP_059528027.1;Parent=gene-LDO45_RS14900;Dbxref=GenBank:WP_059528027.1;Name=WP_059528027.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885922.1;locus_tag=LDO45_RS14900;product=pilin;protein_id=WP_059528027.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 124596 126302 . + . ID=gene-LDO45_RS14905;Name=ltrA;gbkey=Gene;gene=ltrA;gene_biotype=protein_coding;locus_tag=LDO45_RS14905;old_locus_tag=BDI4_260116 NZ_CAJZAS010000179.1 Protein Homology CDS 124596 126302 . + 0 ID=cds-WP_223962265.1;Parent=gene-LDO45_RS14905;Dbxref=GenBank:WP_223962265.1;Name=WP_223962265.1;Ontology_term=GO:0000373,GO:0003964;gbkey=CDS;gene=ltrA;go_function=RNA-directed DNA polymerase activity|0003964||IEA;go_process=Group II intron splicing|0000373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007590077.1;locus_tag=LDO45_RS14905;product=group II intron reverse transcriptase/maturase;protein_id=WP_223962265.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 126425 128203 . + . ID=gene-LDO45_RS14910;Name=LDO45_RS14910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14910;old_locus_tag=BDI4_260117 NZ_CAJZAS010000179.1 Protein Homology CDS 126425 128203 . + 0 ID=cds-WP_223962267.1;Parent=gene-LDO45_RS14910;Dbxref=GenBank:WP_223962267.1;Name=WP_223962267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657828.1;locus_tag=LDO45_RS14910;product=Wzy polymerase domain-containing protein;protein_id=WP_223962267.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 128614 128964 . + . ID=gene-LDO45_RS14915;Name=LDO45_RS14915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14915 NZ_CAJZAS010000179.1 Protein Homology CDS 128614 128964 . + 0 ID=cds-WP_059528021.1;Parent=gene-LDO45_RS14915;Dbxref=GenBank:WP_059528021.1;Name=WP_059528021.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482365.1;locus_tag=LDO45_RS14915;product=TonB family protein;protein_id=WP_059528021.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 129095 130255 . - . ID=gene-LDO45_RS14920;Name=LDO45_RS14920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14920;old_locus_tag=BDI4_260119 NZ_CAJZAS010000179.1 Protein Homology CDS 129095 130255 . - 0 ID=cds-WP_223962281.1;Parent=gene-LDO45_RS14920;Dbxref=GenBank:WP_223962281.1;Name=WP_223962281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723575.1;locus_tag=LDO45_RS14920;product=glycosyl hydrolase;protein_id=WP_223962281.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 130332 131240 . - . ID=gene-LDO45_RS14925;Name=LDO45_RS14925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14925;old_locus_tag=BDI4_260120 NZ_CAJZAS010000179.1 Protein Homology CDS 130332 131240 . - 0 ID=cds-WP_223962269.1;Parent=gene-LDO45_RS14925;Dbxref=GenBank:WP_223962269.1;Name=WP_223962269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477925.1;locus_tag=LDO45_RS14925;product=hypothetical protein;protein_id=WP_223962269.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 131233 133920 . - . ID=gene-LDO45_RS14930;Name=LDO45_RS14930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14930;old_locus_tag=BDI4_260121 NZ_CAJZAS010000179.1 Protein Homology CDS 131233 133920 . - 0 ID=cds-WP_223962270.1;Parent=gene-LDO45_RS14930;Dbxref=GenBank:WP_223962270.1;Name=WP_223962270.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749946.1;locus_tag=LDO45_RS14930;product=type VI secretion system Vgr family protein;protein_id=WP_223962270.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 134137 134625 . - . ID=gene-LDO45_RS14935;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=LDO45_RS14935;old_locus_tag=BDI4_260123 NZ_CAJZAS010000179.1 Protein Homology CDS 134137 134625 . - 0 ID=cds-WP_059820351.1;Parent=gene-LDO45_RS14935;Dbxref=GenBank:WP_059820351.1;Name=WP_059820351.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885918.1;locus_tag=LDO45_RS14935;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_059820351.1;transl_table=11 NZ_CAJZAS010000179.1 RefSeq gene 134901 136181 . + . ID=gene-LDO45_RS14940;Name=LDO45_RS14940;end_range=136181,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14940;partial=true NZ_CAJZAS010000179.1 Protein Homology CDS 134901 136181 . + 0 ID=cds-WP_223962272.1;Parent=gene-LDO45_RS14940;Dbxref=GenBank:WP_223962272.1;Name=WP_223962272.1;Ontology_term=GO:0006508,GO:0004222;end_range=136181,.;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004548066.1;locus_tag=LDO45_RS14940;partial=true;product=M48 family metalloprotease;protein_id=WP_223962272.1;transl_table=11 ##sequence-region NZ_CAJZAS010000180.1 1 17950 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000180.1 RefSeq region 1 17950 . + . ID=NZ_CAJZAS010000180.1:1..17950;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_27 NZ_CAJZAS010000180.1 RefSeq pseudogene 1 644 . - . ID=gene-LDO45_RS14945;Name=LDO45_RS14945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS14945;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000180.1 GeneMarkS-2+ CDS 1 644 . - 0 ID=cds-LDO45_RS14945;Parent=gene-LDO45_RS14945;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS14945;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000180.1 RefSeq gene 648 1265 . - . ID=gene-LDO45_RS14950;Name=LDO45_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14950;old_locus_tag=BDI4_270002 NZ_CAJZAS010000180.1 Protein Homology CDS 648 1265 . - 0 ID=cds-WP_223962285.1;Parent=gene-LDO45_RS14950;Dbxref=GenBank:WP_223962285.1;Name=WP_223962285.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021583.5;locus_tag=LDO45_RS14950;product=YmfQ family protein;protein_id=WP_223962285.1;transl_table=11 NZ_CAJZAS010000180.1 RefSeq gene 1267 2358 . - . ID=gene-LDO45_RS14955;Name=LDO45_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14955;old_locus_tag=BDI4_270003 NZ_CAJZAS010000180.1 Protein Homology CDS 1267 2358 . - 0 ID=cds-WP_223962287.1;Parent=gene-LDO45_RS14955;Dbxref=GenBank:WP_223962287.1;Name=WP_223962287.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401259.1;locus_tag=LDO45_RS14955;product=baseplate J/gp47 family protein;protein_id=WP_223962287.1;transl_table=11 NZ_CAJZAS010000180.1 RefSeq gene 2773 4392 . + . ID=gene-LDO45_RS14960;Name=LDO45_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14960;old_locus_tag=BDI4_270004 NZ_CAJZAS010000180.1 Protein Homology CDS 2773 4392 . + 0 ID=cds-WP_223962288.1;Parent=gene-LDO45_RS14960;Dbxref=GenBank:WP_223962288.1;Name=WP_223962288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008917384.1;locus_tag=LDO45_RS14960;product=glycoside hydrolase family 43 protein;protein_id=WP_223962288.1;transl_table=11 NZ_CAJZAS010000180.1 RefSeq gene 4440 5738 . + . ID=gene-LDO45_RS14965;Name=LDO45_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14965;old_locus_tag=BDI4_270005 NZ_CAJZAS010000180.1 Protein Homology CDS 4440 5738 . + 0 ID=cds-WP_223962289.1;Parent=gene-LDO45_RS14965;Dbxref=GenBank:WP_223962289.1;Name=WP_223962289.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013093055.1;locus_tag=LDO45_RS14965;product=MFS transporter;protein_id=WP_223962289.1;transl_table=11 NZ_CAJZAS010000180.1 RefSeq gene 5885 6154 . + . ID=gene-LDO45_RS14970;Name=LDO45_RS14970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14970;old_locus_tag=BDI4_270006 NZ_CAJZAS010000180.1 Protein Homology CDS 5885 6154 . + 0 ID=cds-WP_223962290.1;Parent=gene-LDO45_RS14970;Dbxref=GenBank:WP_223962290.1;Name=WP_223962290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007182934.1;locus_tag=LDO45_RS14970;product=EexN family lipoprotein;protein_id=WP_223962290.1;transl_table=11 NZ_CAJZAS010000180.1 RefSeq gene 6260 6700 . - . ID=gene-LDO45_RS14975;Name=LDO45_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14975;old_locus_tag=BDI4_270007 NZ_CAJZAS010000180.1 Protein Homology CDS 6260 6700 . - 0 ID=cds-WP_223962291.1;Parent=gene-LDO45_RS14975;Dbxref=GenBank:WP_223962291.1;Name=WP_223962291.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011487645.1;locus_tag=LDO45_RS14975;product=phage GP46 family protein;protein_id=WP_223962291.1;transl_table=11 NZ_CAJZAS010000180.1 RefSeq gene 6710 7273 . - . ID=gene-LDO45_RS14980;Name=LDO45_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14980;old_locus_tag=BDI4_270008 NZ_CAJZAS010000180.1 Protein Homology CDS 6710 7273 . - 0 ID=cds-WP_223962292.1;Parent=gene-LDO45_RS14980;Dbxref=GenBank:WP_223962292.1;Name=WP_223962292.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011487644.1;locus_tag=LDO45_RS14980;product=phage baseplate assembly protein V;protein_id=WP_223962292.1;transl_table=11 NZ_CAJZAS010000180.1 RefSeq gene 7349 7993 . + . ID=gene-LDO45_RS14985;Name=LDO45_RS14985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14985;old_locus_tag=BDI4_270009 NZ_CAJZAS010000180.1 GeneMarkS-2+ CDS 7349 7993 . + 0 ID=cds-WP_223962294.1;Parent=gene-LDO45_RS14985;Dbxref=GenBank:WP_223962294.1;Name=WP_223962294.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS14985;product=hypothetical protein;protein_id=WP_223962294.1;transl_table=11 NZ_CAJZAS010000180.1 RefSeq gene 8027 9082 . - . ID=gene-LDO45_RS14990;Name=LDO45_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14990;old_locus_tag=BDI4_270010 NZ_CAJZAS010000180.1 Protein Homology CDS 8027 9082 . - 0 ID=cds-WP_223962296.1;Parent=gene-LDO45_RS14990;Dbxref=GenBank:WP_223962296.1;Name=WP_223962296.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF047058.1;locus_tag=LDO45_RS14990;product=phage baseplate assembly protein;protein_id=WP_223962296.1;transl_table=11 NZ_CAJZAS010000180.1 RefSeq gene 9194 10129 . + . ID=gene-LDO45_RS14995;Name=LDO45_RS14995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS14995;old_locus_tag=BDI4_270011 NZ_CAJZAS010000180.1 Protein Homology CDS 9194 10129 . + 0 ID=cds-WP_223962298.1;Parent=gene-LDO45_RS14995;Dbxref=GenBank:WP_223962298.1;Name=WP_223962298.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016232.5;locus_tag=LDO45_RS14995;product=helix-turn-helix domain-containing protein;protein_id=WP_223962298.1;transl_table=11 NZ_CAJZAS010000180.1 RefSeq gene 10146 11462 . - . ID=gene-LDO45_RS15000;Name=LDO45_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15000;old_locus_tag=BDI4_270012 NZ_CAJZAS010000180.1 Protein Homology CDS 10146 11462 . - 0 ID=cds-WP_223962300.1;Parent=gene-LDO45_RS15000;Dbxref=GenBank:WP_223962300.1;Name=WP_223962300.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018818.5;locus_tag=LDO45_RS15000;product=DNA circularization protein;protein_id=WP_223962300.1;transl_table=11 NZ_CAJZAS010000180.1 RefSeq gene 11536 11847 . + . ID=gene-LDO45_RS15005;Name=LDO45_RS15005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15005;old_locus_tag=BDI4_270013 NZ_CAJZAS010000180.1 GeneMarkS-2+ CDS 11536 11847 . + 0 ID=cds-WP_223962302.1;Parent=gene-LDO45_RS15005;Dbxref=GenBank:WP_223962302.1;Name=WP_223962302.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS15005;product=hypothetical protein;protein_id=WP_223962302.1;transl_table=11 NZ_CAJZAS010000180.1 RefSeq gene 11881 13899 . - . ID=gene-LDO45_RS15010;Name=LDO45_RS15010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15010;old_locus_tag=BDI4_270014 NZ_CAJZAS010000180.1 Protein Homology CDS 11881 13899 . - 0 ID=cds-WP_223962303.1;Parent=gene-LDO45_RS15010;Dbxref=GenBank:WP_223962303.1;Name=WP_223962303.1;Ontology_term=GO:0016798;gbkey=CDS;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;inference=COORDINATES: protein motif:HMM:NF013618.5;locus_tag=LDO45_RS15010;product=lytic transglycosylase domain-containing protein;protein_id=WP_223962303.1;transl_table=11 NZ_CAJZAS010000180.1 RefSeq gene 13892 14026 . - . ID=gene-LDO45_RS15015;Name=LDO45_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15015;old_locus_tag=BDI4_270015 NZ_CAJZAS010000180.1 Protein Homology CDS 13892 14026 . - 0 ID=cds-WP_223962304.1;Parent=gene-LDO45_RS15015;Dbxref=GenBank:WP_223962304.1;Name=WP_223962304.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018260.5;locus_tag=LDO45_RS15015;product=GpE family phage tail protein;protein_id=WP_223962304.1;transl_table=11 NZ_CAJZAS010000180.1 RefSeq gene 14028 14288 . - . ID=gene-LDO45_RS15020;Name=LDO45_RS15020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15020;old_locus_tag=BDI4_270016 NZ_CAJZAS010000180.1 Protein Homology CDS 14028 14288 . - 0 ID=cds-WP_223961963.1-2;Parent=gene-LDO45_RS15020;Dbxref=GenBank:WP_223961963.1;Name=WP_223961963.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: protein motif:HMM:NF021614.5;locus_tag=LDO45_RS15020;product=phage tail assembly protein;protein_id=WP_223961963.1;transl_table=11 NZ_CAJZAS010000180.1 RefSeq gene 14318 14692 . - . ID=gene-LDO45_RS15025;Name=LDO45_RS15025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15025;old_locus_tag=BDI4_270017 NZ_CAJZAS010000180.1 Protein Homology CDS 14318 14692 . - 0 ID=cds-WP_223961962.1-2;Parent=gene-LDO45_RS15025;Dbxref=GenBank:WP_223961962.1;Name=WP_223961962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495255.1;locus_tag=LDO45_RS15025;product=phage tail tube protein;protein_id=WP_223961962.1;transl_table=11 NZ_CAJZAS010000180.1 RefSeq gene 14703 16181 . - . ID=gene-LDO45_RS15030;Name=LDO45_RS15030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15030;old_locus_tag=BDI4_270018 NZ_CAJZAS010000180.1 Protein Homology CDS 14703 16181 . - 0 ID=cds-WP_223962305.1;Parent=gene-LDO45_RS15030;Dbxref=GenBank:WP_223962305.1;Name=WP_223962305.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495256.1;locus_tag=LDO45_RS15030;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_223962305.1;transl_table=11 NZ_CAJZAS010000180.1 RefSeq gene 16178 16405 . - . ID=gene-LDO45_RS34580;Name=LDO45_RS34580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34580;old_locus_tag=BDI4_270019 NZ_CAJZAS010000180.1 Protein Homology CDS 16178 16405 . - 0 ID=cds-WP_223961960.1-2;Parent=gene-LDO45_RS34580;Dbxref=GenBank:WP_223961960.1;Name=WP_223961960.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022401.5;locus_tag=LDO45_RS34580;product=DUF2635 domain-containing protein;protein_id=WP_223961960.1;transl_table=11 NZ_CAJZAS010000180.1 RefSeq gene 16441 17130 . - . ID=gene-LDO45_RS15040;Name=LDO45_RS15040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15040;old_locus_tag=BDI4_270020 NZ_CAJZAS010000180.1 GeneMarkS-2+ CDS 16441 17130 . - 0 ID=cds-WP_223962306.1;Parent=gene-LDO45_RS15040;Dbxref=GenBank:WP_223962306.1;Name=WP_223962306.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS15040;product=hypothetical protein;protein_id=WP_223962306.1;transl_table=11 NZ_CAJZAS010000180.1 RefSeq gene 17544 17950 . - . ID=gene-LDO45_RS15045;Name=LDO45_RS15045;end_range=17950,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15045;old_locus_tag=BDI4_270022;partial=true;start_range=.,17544 NZ_CAJZAS010000180.1 Protein Homology CDS 17544 17950 . - 1 ID=cds-WP_223962307.1;Parent=gene-LDO45_RS15045;Dbxref=GenBank:WP_223962307.1;Name=WP_223962307.1;end_range=17950,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011487633.1;locus_tag=LDO45_RS15045;partial=true;product=major capsid protein;protein_id=WP_223962307.1;start_range=.,17544;transl_table=11 ##sequence-region NZ_CAJZAS010000181.1 1 70398 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000181.1 RefSeq region 1 70398 . + . ID=NZ_CAJZAS010000181.1:1..70398;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_28 NZ_CAJZAS010000181.1 RefSeq pseudogene 1 265 . - . ID=gene-LDO45_RS15050;Name=LDO45_RS15050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS15050;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000181.1 Protein Homology CDS 1 265 . - 0 ID=cds-LDO45_RS15050;Parent=gene-LDO45_RS15050;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724917.1;locus_tag=LDO45_RS15050;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 585 1055 . + . ID=gene-LDO45_RS15055;Name=LDO45_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15055;old_locus_tag=BDI4_280002 NZ_CAJZAS010000181.1 Protein Homology CDS 585 1055 . + 0 ID=cds-WP_059525714.1;Parent=gene-LDO45_RS15055;Dbxref=GenBank:WP_059525714.1;Name=WP_059525714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491557.1;locus_tag=LDO45_RS15055;product=universal stress protein;protein_id=WP_059525714.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 1413 1919 . + . ID=gene-LDO45_RS15060;Name=LDO45_RS15060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15060;old_locus_tag=BDI4_280004 NZ_CAJZAS010000181.1 Protein Homology CDS 1413 1919 . + 0 ID=cds-WP_059525716.1;Parent=gene-LDO45_RS15060;Dbxref=GenBank:WP_059525716.1;Name=WP_059525716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366041.1;locus_tag=LDO45_RS15060;product=cupin domain-containing protein;protein_id=WP_059525716.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 2086 3111 . + . ID=gene-LDO45_RS15065;Name=LDO45_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15065;old_locus_tag=BDI4_280005 NZ_CAJZAS010000181.1 Protein Homology CDS 2086 3111 . + 0 ID=cds-WP_059525400.1;Parent=gene-LDO45_RS15065;Dbxref=GenBank:WP_059525400.1;Name=WP_059525400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012340050.1;locus_tag=LDO45_RS15065;product=DedA family protein/thiosulfate sulfurtransferase GlpE;protein_id=WP_059525400.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 3552 4934 . + . ID=gene-LDO45_RS15070;Name=LDO45_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15070;old_locus_tag=BDI4_280006 NZ_CAJZAS010000181.1 Protein Homology CDS 3552 4934 . + 0 ID=cds-WP_059690052.1;Parent=gene-LDO45_RS15070;Dbxref=GenBank:WP_059690052.1;Name=WP_059690052.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494879.1;locus_tag=LDO45_RS15070;product=amino acid permease;protein_id=WP_059690052.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 5187 6122 . + . ID=gene-LDO45_RS15075;Name=LDO45_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15075;old_locus_tag=BDI4_280007 NZ_CAJZAS010000181.1 Protein Homology CDS 5187 6122 . + 0 ID=cds-WP_059700346.1;Parent=gene-LDO45_RS15075;Dbxref=GenBank:WP_059700346.1;Name=WP_059700346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479048.1;locus_tag=LDO45_RS15075;product=universal stress protein;protein_id=WP_059700346.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 6609 7019 . - . ID=gene-LDO45_RS15080;Name=LDO45_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15080;old_locus_tag=BDI4_280008 NZ_CAJZAS010000181.1 Protein Homology CDS 6609 7019 . - 0 ID=cds-WP_223962308.1;Parent=gene-LDO45_RS15080;Dbxref=GenBank:WP_223962308.1;Name=WP_223962308.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882187.1;locus_tag=LDO45_RS15080;product=hypothetical protein;protein_id=WP_223962308.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 7582 7836 . + . ID=gene-LDO45_RS15085;Name=LDO45_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15085;old_locus_tag=BDI4_280010 NZ_CAJZAS010000181.1 Protein Homology CDS 7582 7836 . + 0 ID=cds-WP_223962309.1;Parent=gene-LDO45_RS15085;Dbxref=GenBank:WP_223962309.1;Name=WP_223962309.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491227.1;locus_tag=LDO45_RS15085;product=DUF3562 domain-containing protein;protein_id=WP_223962309.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 8047 9846 . + . ID=gene-LDO45_RS15090;Name=LDO45_RS15090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15090;old_locus_tag=BDI4_280011 NZ_CAJZAS010000181.1 Protein Homology CDS 8047 9846 . + 0 ID=cds-WP_059690057.1;Parent=gene-LDO45_RS15090;Dbxref=GenBank:WP_059690057.1;Name=WP_059690057.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355245.1;locus_tag=LDO45_RS15090;product=methyl-accepting chemotaxis protein;protein_id=WP_059690057.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 9901 10938 . - . ID=gene-LDO45_RS15095;Name=LDO45_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15095;old_locus_tag=BDI4_280012 NZ_CAJZAS010000181.1 Protein Homology CDS 9901 10938 . - 0 ID=cds-WP_223962311.1;Parent=gene-LDO45_RS15095;Dbxref=GenBank:WP_223962311.1;Name=WP_223962311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899412.1;locus_tag=LDO45_RS15095;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_223962311.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 11272 13239 . + . ID=gene-LDO45_RS15100;Name=LDO45_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15100;old_locus_tag=BDI4_280014 NZ_CAJZAS010000181.1 Protein Homology CDS 11272 13239 . + 0 ID=cds-WP_223962313.1;Parent=gene-LDO45_RS15100;Dbxref=GenBank:WP_223962313.1;Name=WP_223962313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760834.1;locus_tag=LDO45_RS15100;product=ATP-binding protein;protein_id=WP_223962313.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 13340 13969 . + . ID=gene-LDO45_RS15105;Name=LDO45_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15105;old_locus_tag=BDI4_280015 NZ_CAJZAS010000181.1 Protein Homology CDS 13340 13969 . + 0 ID=cds-WP_223962352.1;Parent=gene-LDO45_RS15105;Dbxref=GenBank:WP_223962352.1;Name=WP_223962352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547717.1;locus_tag=LDO45_RS15105;product=DUF4142 domain-containing protein;protein_id=WP_223962352.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 13977 14477 . - . ID=gene-LDO45_RS15110;Name=LDO45_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15110;old_locus_tag=BDI4_280016 NZ_CAJZAS010000181.1 Protein Homology CDS 13977 14477 . - 0 ID=cds-WP_223962315.1;Parent=gene-LDO45_RS15110;Dbxref=GenBank:WP_223962315.1;Name=WP_223962315.1;Ontology_term=GO:0019684,GO:0042314;gbkey=CDS;go_function=bacteriochlorophyll binding|0042314||IEA;go_process=photosynthesis%2C light reaction|0019684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494872.1;locus_tag=LDO45_RS15110;product=PRC-barrel domain-containing protein;protein_id=WP_223962315.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 14547 14978 . - . ID=gene-LDO45_RS15115;Name=LDO45_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15115;old_locus_tag=BDI4_280018 NZ_CAJZAS010000181.1 Protein Homology CDS 14547 14978 . - 0 ID=cds-WP_059525418.1;Parent=gene-LDO45_RS15115;Dbxref=GenBank:WP_059525418.1;Name=WP_059525418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899408.1;locus_tag=LDO45_RS15115;product=CBS domain-containing protein;protein_id=WP_059525418.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 15319 15567 . - . ID=gene-LDO45_RS15120;Name=LDO45_RS15120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15120;old_locus_tag=BDI4_280020 NZ_CAJZAS010000181.1 Protein Homology CDS 15319 15567 . - 0 ID=cds-WP_059525420.1;Parent=gene-LDO45_RS15120;Dbxref=GenBank:WP_059525420.1;Name=WP_059525420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413648.1;locus_tag=LDO45_RS15120;product=hypothetical protein;protein_id=WP_059525420.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 15709 16008 . + . ID=gene-LDO45_RS15125;Name=LDO45_RS15125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15125;old_locus_tag=BDI4_280021 NZ_CAJZAS010000181.1 Protein Homology CDS 15709 16008 . + 0 ID=cds-WP_059525422.1;Parent=gene-LDO45_RS15125;Dbxref=GenBank:WP_059525422.1;Name=WP_059525422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355238.1;locus_tag=LDO45_RS15125;product=hypothetical protein;protein_id=WP_059525422.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 16309 16620 . + . ID=gene-LDO45_RS15130;Name=LDO45_RS15130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15130;old_locus_tag=BDI4_280023 NZ_CAJZAS010000181.1 Protein Homology CDS 16309 16620 . + 0 ID=cds-WP_044843100.1;Parent=gene-LDO45_RS15130;Dbxref=GenBank:WP_044843100.1;Name=WP_044843100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750981.1;locus_tag=LDO45_RS15130;product=hypothetical protein;protein_id=WP_044843100.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 16827 17705 . + . ID=gene-LDO45_RS15135;Name=LDO45_RS15135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15135;old_locus_tag=BDI4_280024 NZ_CAJZAS010000181.1 Protein Homology CDS 16827 17705 . + 0 ID=cds-WP_223962317.1;Parent=gene-LDO45_RS15135;Dbxref=GenBank:WP_223962317.1;Name=WP_223962317.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658806.1;locus_tag=LDO45_RS15135;product=MipA/OmpV family protein;protein_id=WP_223962317.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 17806 19500 . + . ID=gene-LDO45_RS15140;Name=LDO45_RS15140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15140;old_locus_tag=BDI4_280025 NZ_CAJZAS010000181.1 Protein Homology CDS 17806 19500 . + 0 ID=cds-WP_223962319.1;Parent=gene-LDO45_RS15140;Dbxref=GenBank:WP_223962319.1;Name=WP_223962319.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012340033.1;locus_tag=LDO45_RS15140;product=VRR-NUC domain-containing protein;protein_id=WP_223962319.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 19497 21797 . + . ID=gene-LDO45_RS15145;Name=LDO45_RS15145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15145;old_locus_tag=BDI4_280026 NZ_CAJZAS010000181.1 Protein Homology CDS 19497 21797 . + 0 ID=cds-WP_223962321.1;Parent=gene-LDO45_RS15145;Dbxref=GenBank:WP_223962321.1;Name=WP_223962321.1;Ontology_term=GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355233.1;locus_tag=LDO45_RS15145;product=ATP-dependent DNA helicase;protein_id=WP_223962321.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 21847 22617 . - . ID=gene-LDO45_RS15150;Name=LDO45_RS15150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15150;old_locus_tag=BDI4_280027 NZ_CAJZAS010000181.1 Protein Homology CDS 21847 22617 . - 0 ID=cds-WP_059525428.1;Parent=gene-LDO45_RS15150;Dbxref=GenBank:WP_059525428.1;Name=WP_059525428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899400.1;locus_tag=LDO45_RS15150;product=IclR family transcriptional regulator C-terminal domain-containing protein;protein_id=WP_059525428.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 22885 24186 . - . ID=gene-LDO45_RS15155;Name=LDO45_RS15155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15155;old_locus_tag=BDI4_280029 NZ_CAJZAS010000181.1 Protein Homology CDS 22885 24186 . - 0 ID=cds-WP_059819067.1;Parent=gene-LDO45_RS15155;Dbxref=GenBank:WP_059819067.1;Name=WP_059819067.1;Ontology_term=GO:0007049,GO:0008360,GO:0009252,GO:0019277,GO:0051301,GO:0071555,GO:0008760;gbkey=CDS;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=cell cycle|0007049||IEA,regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198657.1;locus_tag=LDO45_RS15155;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_059819067.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 24397 25704 . - . ID=gene-LDO45_RS15160;Name=shiA;gbkey=Gene;gene=shiA;gene_biotype=protein_coding;locus_tag=LDO45_RS15160;old_locus_tag=BDI4_280030 NZ_CAJZAS010000181.1 Protein Homology CDS 24397 25704 . - 0 ID=cds-WP_059525432.1;Parent=gene-LDO45_RS15160;Dbxref=GenBank:WP_059525432.1;Name=WP_059525432.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=shiA;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355229.1;locus_tag=LDO45_RS15160;product=shikimate transporter;protein_id=WP_059525432.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 26062 27189 . + . ID=gene-LDO45_RS15165;Name=LDO45_RS15165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15165;old_locus_tag=BDI4_280031 NZ_CAJZAS010000181.1 Protein Homology CDS 26062 27189 . + 0 ID=cds-WP_059525434.1;Parent=gene-LDO45_RS15165;Dbxref=GenBank:WP_059525434.1;Name=WP_059525434.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658813.1;locus_tag=LDO45_RS15165;product=4-hydroxyphenylpyruvate dioxygenase family protein;protein_id=WP_059525434.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 27236 28471 . - . ID=gene-LDO45_RS15170;Name=LDO45_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15170;old_locus_tag=BDI4_280032 NZ_CAJZAS010000181.1 Protein Homology CDS 27236 28471 . - 0 ID=cds-WP_223962324.1;Parent=gene-LDO45_RS15170;Dbxref=GenBank:WP_223962324.1;Name=WP_223962324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485217.1;locus_tag=LDO45_RS15170;product=NADH:flavin oxidoreductase;protein_id=WP_223962324.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 28576 29910 . - . ID=gene-LDO45_RS15175;Name=LDO45_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15175;old_locus_tag=BDI4_280033 NZ_CAJZAS010000181.1 Protein Homology CDS 28576 29910 . - 0 ID=cds-WP_059525723.1;Parent=gene-LDO45_RS15175;Dbxref=GenBank:WP_059525723.1;Name=WP_059525723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658814.1;locus_tag=LDO45_RS15175;product=type II toxin-antitoxin system HipA family toxin;protein_id=WP_059525723.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 29913 30335 . - . ID=gene-LDO45_RS15180;Name=LDO45_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15180;old_locus_tag=BDI4_280034 NZ_CAJZAS010000181.1 Protein Homology CDS 29913 30335 . - 0 ID=cds-WP_059700372.1;Parent=gene-LDO45_RS15180;Dbxref=GenBank:WP_059700372.1;Name=WP_059700372.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403534.1;locus_tag=LDO45_RS15180;product=helix-turn-helix transcriptional regulator;protein_id=WP_059700372.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 30501 31625 . - . ID=gene-LDO45_RS15185;Name=ribBA;gbkey=Gene;gene=ribBA;gene_biotype=protein_coding;locus_tag=LDO45_RS15185;old_locus_tag=BDI4_280035 NZ_CAJZAS010000181.1 Protein Homology CDS 30501 31625 . - 0 ID=cds-WP_223962326.1;Parent=gene-LDO45_RS15185;Dbxref=GenBank:WP_223962326.1;Name=WP_223962326.1;Ontology_term=GO:0003935,GO:0008686;gbkey=CDS;gene=ribBA;go_function=GTP cyclohydrolase II activity|0003935||IEA,3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485225.1;locus_tag=LDO45_RS15185;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=WP_223962326.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 31622 32560 . - . ID=gene-LDO45_RS15190;Name=LDO45_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15190;old_locus_tag=BDI4_280036 NZ_CAJZAS010000181.1 Protein Homology CDS 31622 32560 . - 0 ID=cds-WP_223962328.1;Parent=gene-LDO45_RS15190;Dbxref=GenBank:WP_223962328.1;Name=WP_223962328.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013952275.1;locus_tag=LDO45_RS15190;product=alpha/beta hydrolase;protein_id=WP_223962328.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 32842 34032 . + . ID=gene-LDO45_RS15195;Name=LDO45_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15195;old_locus_tag=BDI4_280037 NZ_CAJZAS010000181.1 Protein Homology CDS 32842 34032 . + 0 ID=cds-WP_059525725.1;Parent=gene-LDO45_RS15195;Dbxref=GenBank:WP_059525725.1;Name=WP_059525725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493335.1;locus_tag=LDO45_RS15195;product=LuxR family transcriptional regulator;protein_id=WP_059525725.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq pseudogene 34041 34207 . - . ID=gene-LDO45_RS15200;Name=LDO45_RS15200;end_range=34207,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS15200;partial=true;pseudo=true;start_range=.,34041 NZ_CAJZAS010000181.1 Protein Homology CDS 34041 34207 . - 0 ID=cds-LDO45_RS15200;Parent=gene-LDO45_RS15200;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=34207,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012340023.1;locus_tag=LDO45_RS15200;partial=true;product=cation transporter;pseudo=true;start_range=.,34041;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 34234 35103 . - . ID=gene-LDO45_RS15205;Name=LDO45_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15205;old_locus_tag=BDI4_280038 NZ_CAJZAS010000181.1 Protein Homology CDS 34234 35103 . - 0 ID=cds-WP_223962330.1;Parent=gene-LDO45_RS15205;Dbxref=GenBank:WP_223962330.1;Name=WP_223962330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335053.1;locus_tag=LDO45_RS15205;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_223962330.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 35114 38092 . - . ID=gene-LDO45_RS15210;Name=LDO45_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15210;old_locus_tag=BDI4_280039 NZ_CAJZAS010000181.1 Protein Homology CDS 35114 38092 . - 0 ID=cds-WP_223962332.1;Parent=gene-LDO45_RS15210;Dbxref=GenBank:WP_223962332.1;Name=WP_223962332.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751529.1;locus_tag=LDO45_RS15210;product=molybdopterin-dependent oxidoreductase;protein_id=WP_223962332.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 38147 38884 . - . ID=gene-LDO45_RS15215;Name=LDO45_RS15215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15215;old_locus_tag=BDI4_280040 NZ_CAJZAS010000181.1 Protein Homology CDS 38147 38884 . - 0 ID=cds-WP_223962354.1;Parent=gene-LDO45_RS15215;Dbxref=GenBank:WP_223962354.1;Name=WP_223962354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751530.1;locus_tag=LDO45_RS15215;product=OmpW family protein;protein_id=WP_223962354.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 39000 40994 . - . ID=gene-LDO45_RS15220;Name=LDO45_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15220;old_locus_tag=BDI4_280041 NZ_CAJZAS010000181.1 Protein Homology CDS 39000 40994 . - 0 ID=cds-WP_223962334.1;Parent=gene-LDO45_RS15220;Dbxref=GenBank:WP_223962334.1;Name=WP_223962334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335050.1;locus_tag=LDO45_RS15220;product=acyl-CoA synthetase;protein_id=WP_223962334.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 40991 41947 . - . ID=gene-LDO45_RS15225;Name=LDO45_RS15225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15225;old_locus_tag=BDI4_280042 NZ_CAJZAS010000181.1 Protein Homology CDS 40991 41947 . - 0 ID=cds-WP_059525449.1;Parent=gene-LDO45_RS15225;Dbxref=GenBank:WP_059525449.1;Name=WP_059525449.1;Ontology_term=GO:0003824,GO:0016787;gbkey=CDS;go_function=catalytic activity|0003824||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751532.1;locus_tag=LDO45_RS15225;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_059525449.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 41984 43054 . - . ID=gene-LDO45_RS15230;Name=LDO45_RS15230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15230;old_locus_tag=BDI4_280043 NZ_CAJZAS010000181.1 Protein Homology CDS 41984 43054 . - 0 ID=cds-WP_223962336.1;Parent=gene-LDO45_RS15230;Dbxref=GenBank:WP_223962336.1;Name=WP_223962336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335048.1;locus_tag=LDO45_RS15230;product=VOC family protein;protein_id=WP_223962336.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 43067 43453 . - . ID=gene-LDO45_RS15235;Name=LDO45_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15235;old_locus_tag=BDI4_280044 NZ_CAJZAS010000181.1 Protein Homology CDS 43067 43453 . - 0 ID=cds-WP_223962338.1;Parent=gene-LDO45_RS15235;Dbxref=GenBank:WP_223962338.1;Name=WP_223962338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335047.1;locus_tag=LDO45_RS15235;product=hypothetical protein;protein_id=WP_223962338.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 43590 44339 . + . ID=gene-LDO45_RS15240;Name=LDO45_RS15240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15240;old_locus_tag=BDI4_280046 NZ_CAJZAS010000181.1 Protein Homology CDS 43590 44339 . + 0 ID=cds-WP_059525455.1;Parent=gene-LDO45_RS15240;Dbxref=GenBank:WP_059525455.1;Name=WP_059525455.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218164.1;locus_tag=LDO45_RS15240;product=TetR/AcrR family transcriptional regulator;protein_id=WP_059525455.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 44380 44964 . - . ID=gene-LDO45_RS15245;Name=LDO45_RS15245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15245;old_locus_tag=BDI4_280047 NZ_CAJZAS010000181.1 Protein Homology CDS 44380 44964 . - 0 ID=cds-WP_223962339.1;Parent=gene-LDO45_RS15245;Dbxref=GenBank:WP_223962339.1;Name=WP_223962339.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751535.1;locus_tag=LDO45_RS15245;product=TetR/AcrR family transcriptional regulator;protein_id=WP_223962339.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 44933 45538 . - . ID=gene-LDO45_RS15250;Name=LDO45_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15250;old_locus_tag=BDI4_280048 NZ_CAJZAS010000181.1 Protein Homology CDS 44933 45538 . - 0 ID=cds-WP_223962340.1;Parent=gene-LDO45_RS15250;Dbxref=GenBank:WP_223962340.1;Name=WP_223962340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335024.1;locus_tag=LDO45_RS15250;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_223962340.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 45565 47160 . - . ID=gene-LDO45_RS15255;Name=LDO45_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15255;old_locus_tag=BDI4_280049 NZ_CAJZAS010000181.1 Protein Homology CDS 45565 47160 . - 0 ID=cds-WP_223962341.1;Parent=gene-LDO45_RS15255;Dbxref=GenBank:WP_223962341.1;Name=WP_223962341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218162.1;locus_tag=LDO45_RS15255;product=intermembrane transport protein PqiB;protein_id=WP_223962341.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 47200 48534 . - . ID=gene-LDO45_RS15260;Name=LDO45_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15260;old_locus_tag=BDI4_280050 NZ_CAJZAS010000181.1 Protein Homology CDS 47200 48534 . - 0 ID=cds-WP_223962342.1;Parent=gene-LDO45_RS15260;Dbxref=GenBank:WP_223962342.1;Name=WP_223962342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091388.1;locus_tag=LDO45_RS15260;product=paraquat-inducible protein A;protein_id=WP_223962342.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 48662 50128 . - . ID=gene-LDO45_RS15265;Name=LDO45_RS15265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15265;old_locus_tag=BDI4_280051 NZ_CAJZAS010000181.1 Protein Homology CDS 48662 50128 . - 0 ID=cds-WP_223962343.1;Parent=gene-LDO45_RS15265;Dbxref=GenBank:WP_223962343.1;Name=WP_223962343.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750389.1;locus_tag=LDO45_RS15265;product=efflux transporter outer membrane subunit;protein_id=WP_223962343.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 50128 53292 . - . ID=gene-LDO45_RS15270;Name=LDO45_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15270;old_locus_tag=BDI4_280052 NZ_CAJZAS010000181.1 Protein Homology CDS 50128 53292 . - 0 ID=cds-WP_059690077.1;Parent=gene-LDO45_RS15270;Dbxref=GenBank:WP_059690077.1;Name=WP_059690077.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094135.1;locus_tag=LDO45_RS15270;product=efflux RND transporter permease subunit;protein_id=WP_059690077.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 53289 54410 . - . ID=gene-LDO45_RS15275;Name=LDO45_RS15275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15275;old_locus_tag=BDI4_280053 NZ_CAJZAS010000181.1 Protein Homology CDS 53289 54410 . - 0 ID=cds-WP_223962356.1;Parent=gene-LDO45_RS15275;Dbxref=GenBank:WP_223962356.1;Name=WP_223962356.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014250479.1;locus_tag=LDO45_RS15275;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_223962356.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 54925 55596 . + . ID=gene-LDO45_RS15280;Name=LDO45_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15280;old_locus_tag=BDI4_280054 NZ_CAJZAS010000181.1 Protein Homology CDS 54925 55596 . + 0 ID=cds-WP_223962358.1;Parent=gene-LDO45_RS15280;Dbxref=GenBank:WP_223962358.1;Name=WP_223962358.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335046.1;locus_tag=LDO45_RS15280;product=TetR/AcrR family transcriptional regulator;protein_id=WP_223962358.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 55977 56987 . + . ID=gene-LDO45_RS15285;Name=LDO45_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15285;old_locus_tag=BDI4_280056 NZ_CAJZAS010000181.1 Protein Homology CDS 55977 56987 . + 0 ID=cds-WP_223962344.1;Parent=gene-LDO45_RS15285;Dbxref=GenBank:WP_223962344.1;Name=WP_223962344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467927.1;locus_tag=LDO45_RS15285;product=DNA-binding protein;protein_id=WP_223962344.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 57111 57731 . + . ID=gene-LDO45_RS15290;Name=LDO45_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15290;old_locus_tag=BDI4_280057 NZ_CAJZAS010000181.1 Protein Homology CDS 57111 57731 . + 0 ID=cds-WP_059525468.1;Parent=gene-LDO45_RS15290;Dbxref=GenBank:WP_059525468.1;Name=WP_059525468.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479022.1;locus_tag=LDO45_RS15290;product=TetR/AcrR family transcriptional regulator;protein_id=WP_059525468.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 57935 58993 . + . ID=gene-LDO45_RS15295;Name=LDO45_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15295;old_locus_tag=BDI4_280058 NZ_CAJZAS010000181.1 Protein Homology CDS 57935 58993 . + 0 ID=cds-WP_059700399.1;Parent=gene-LDO45_RS15295;Dbxref=GenBank:WP_059700399.1;Name=WP_059700399.1;Ontology_term=GO:0016628;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479021.1;locus_tag=LDO45_RS15295;product=NADP-dependent oxidoreductase;protein_id=WP_059700399.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 59087 59386 . + . ID=gene-LDO45_RS15300;Name=LDO45_RS15300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15300;old_locus_tag=BDI4_280059 NZ_CAJZAS010000181.1 Protein Homology CDS 59087 59386 . + 0 ID=cds-WP_059700401.1;Parent=gene-LDO45_RS15300;Dbxref=GenBank:WP_059700401.1;Name=WP_059700401.1;Ontology_term=GO:0004497;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479020.1;locus_tag=LDO45_RS15300;product=putative quinol monooxygenase;protein_id=WP_059700401.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 59523 59978 . + . ID=gene-LDO45_RS15305;Name=LDO45_RS15305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15305;old_locus_tag=BDI4_280060 NZ_CAJZAS010000181.1 Protein Homology CDS 59523 59978 . + 0 ID=cds-WP_059525474.1;Parent=gene-LDO45_RS15305;Dbxref=GenBank:WP_059525474.1;Name=WP_059525474.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329294.1;locus_tag=LDO45_RS15305;product=(2Fe-2S)-binding protein;protein_id=WP_059525474.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 59980 62202 . + . ID=gene-LDO45_RS15310;Name=LDO45_RS15310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15310;old_locus_tag=BDI4_280061 NZ_CAJZAS010000181.1 Protein Homology CDS 59980 62202 . + 0 ID=cds-WP_223962345.1;Parent=gene-LDO45_RS15310;Dbxref=GenBank:WP_223962345.1;Name=WP_223962345.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899380.1;locus_tag=LDO45_RS15310;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;protein_id=WP_223962345.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 62218 63537 . + . ID=gene-LDO45_RS15315;Name=LDO45_RS15315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15315;old_locus_tag=BDI4_280062 NZ_CAJZAS010000181.1 Protein Homology CDS 62218 63537 . + 0 ID=cds-WP_223962346.1;Parent=gene-LDO45_RS15315;Dbxref=GenBank:WP_223962346.1;Name=WP_223962346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882247.1;locus_tag=LDO45_RS15315;product=cytochrome c;protein_id=WP_223962346.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 63699 65144 . + . ID=gene-LDO45_RS15320;Name=LDO45_RS15320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15320;old_locus_tag=BDI4_280063 NZ_CAJZAS010000181.1 Protein Homology CDS 63699 65144 . + 0 ID=cds-WP_223962348.1;Parent=gene-LDO45_RS15320;Dbxref=GenBank:WP_223962348.1;Name=WP_223962348.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397042.1;locus_tag=LDO45_RS15320;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_223962348.1;transl_table=11 NZ_CAJZAS010000181.1 RefSeq pseudogene 65611 65865 . + . ID=gene-LDO45_RS15325;Name=LDO45_RS15325;end_range=65865,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS15325;partial=true;pseudo=true NZ_CAJZAS010000181.1 Protein Homology CDS 65611 65865 . + 0 ID=cds-LDO45_RS15325;Parent=gene-LDO45_RS15325;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=65865,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336742.1;locus_tag=LDO45_RS15325;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAS010000181.1 RefSeq gene 65944 70398 . - . ID=gene-LDO45_RS15330;Name=LDO45_RS15330;end_range=70398,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15330;old_locus_tag=BDI4_280064;partial=true NZ_CAJZAS010000181.1 Protein Homology CDS 65944 70398 . - 0 ID=cds-WP_223962350.1;Parent=gene-LDO45_RS15330;Dbxref=GenBank:WP_223962350.1;Name=WP_223962350.1;end_range=70398,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758639.1;locus_tag=LDO45_RS15330;partial=true;product=LWXIA domain-containing protein;protein_id=WP_223962350.1;transl_table=11 ##sequence-region NZ_CAJZAS010000182.1 1 140291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000182.1 RefSeq region 1 140291 . + . ID=NZ_CAJZAS010000182.1:1..140291;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_29 NZ_CAJZAS010000182.1 RefSeq pseudogene 20 849 . + . ID=gene-LDO45_RS15335;Name=fhuF;gbkey=Gene;gene=fhuF;gene_biotype=pseudogene;locus_tag=LDO45_RS15335;old_locus_tag=BDI4_290002;pseudo=true NZ_CAJZAS010000182.1 Protein Homology CDS 20 849 . + 0 ID=cds-LDO45_RS15335;Parent=gene-LDO45_RS15335;Note=frameshifted%3B too many ambiguous residues;Ontology_term=GO:0033214,GO:0008199,GO:0016491,GO:0051537;gbkey=CDS;gene=fhuF;go_function=ferric iron binding|0008199||IEA,oxidoreductase activity|0016491||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=siderophore-dependent iron import into cell|0033214||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488656.1;locus_tag=LDO45_RS15335;product=siderophore-iron reductase FhuF;pseudo=true;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 846 1889 . + . ID=gene-LDO45_RS15340;Name=LDO45_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15340;old_locus_tag=BDI4_290003 NZ_CAJZAS010000182.1 Protein Homology CDS 846 1889 . + 0 ID=cds-WP_223962360.1;Parent=gene-LDO45_RS15340;Dbxref=GenBank:WP_223962360.1;Name=WP_223962360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534458.1;locus_tag=LDO45_RS15340;product=ABC transporter substrate-binding protein;protein_id=WP_223962360.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 2105 3850 . - . ID=gene-LDO45_RS15345;Name=LDO45_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15345;old_locus_tag=BDI4_290004 NZ_CAJZAS010000182.1 Protein Homology CDS 2105 3850 . - 0 ID=cds-WP_223962361.1;Parent=gene-LDO45_RS15345;Dbxref=GenBank:WP_223962361.1;Name=WP_223962361.1;Ontology_term=GO:0015833,GO:0005524,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351939.1;locus_tag=LDO45_RS15345;product=cyclic peptide export ABC transporter;protein_id=WP_223962361.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 4123 6105 . + . ID=gene-LDO45_RS15350;Name=LDO45_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15350;old_locus_tag=BDI4_290005 NZ_CAJZAS010000182.1 Protein Homology CDS 4123 6105 . + 0 ID=cds-WP_223962460.1;Parent=gene-LDO45_RS15350;Dbxref=GenBank:WP_223962460.1;Name=WP_223962460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656117.1;locus_tag=LDO45_RS15350;product=amino acid adenylation domain-containing protein;protein_id=WP_223962460.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 6288 6866 . + . ID=gene-LDO45_RS15355;Name=LDO45_RS15355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15355;old_locus_tag=BDI4_290006 NZ_CAJZAS010000182.1 Protein Homology CDS 6288 6866 . + 0 ID=cds-WP_006751106.1;Parent=gene-LDO45_RS15355;Dbxref=GenBank:WP_006751106.1;Name=WP_006751106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185441.1;locus_tag=LDO45_RS15355;product=YqgE/AlgH family protein;protein_id=WP_006751106.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 6863 7312 . + . ID=gene-LDO45_RS15360;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=LDO45_RS15360;old_locus_tag=BDI4_290007 NZ_CAJZAS010000182.1 Protein Homology CDS 6863 7312 . + 0 ID=cds-WP_223962362.1;Parent=gene-LDO45_RS15360;Dbxref=GenBank:WP_223962362.1;Name=WP_223962362.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762411.1;locus_tag=LDO45_RS15360;product=Holliday junction resolvase RuvX;protein_id=WP_223962362.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 7299 7814 . + . ID=gene-LDO45_RS15365;Name=pyrR;gbkey=Gene;gene=pyrR;gene_biotype=protein_coding;locus_tag=LDO45_RS15365;old_locus_tag=BDI4_290008 NZ_CAJZAS010000182.1 Protein Homology CDS 7299 7814 . + 0 ID=cds-WP_059538920.1;Parent=gene-LDO45_RS15365;Dbxref=GenBank:WP_059538920.1;Name=WP_059538920.1;Ontology_term=GO:0009116;gbkey=CDS;gene=pyrR;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476736.1;locus_tag=LDO45_RS15365;product=bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR;protein_id=WP_059538920.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 7889 8920 . + . ID=gene-LDO45_RS15370;Name=LDO45_RS15370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15370;old_locus_tag=BDI4_290009 NZ_CAJZAS010000182.1 Protein Homology CDS 7889 8920 . + 0 ID=cds-WP_044846292.1;Parent=gene-LDO45_RS15370;Dbxref=GenBank:WP_044846292.1;Name=WP_044846292.1;Ontology_term=GO:0006207,GO:0006520,GO:0004070,GO:0016597;gbkey=CDS;go_function=aspartate carbamoyltransferase activity|0004070||IEA,amino acid binding|0016597||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600263.1;locus_tag=LDO45_RS15370;product=aspartate carbamoyltransferase catalytic subunit;protein_id=WP_044846292.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 8973 10250 . + . ID=gene-LDO45_RS15375;Name=LDO45_RS15375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15375;old_locus_tag=BDI4_290010 NZ_CAJZAS010000182.1 Protein Homology CDS 8973 10250 . + 0 ID=cds-WP_059690734.1;Parent=gene-LDO45_RS15375;Dbxref=GenBank:WP_059690734.1;Name=WP_059690734.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897896.1;locus_tag=LDO45_RS15375;product=dihydroorotase;protein_id=WP_059690734.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 10270 11127 . + . ID=gene-LDO45_RS15380;Name=LDO45_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15380;old_locus_tag=BDI4_290011 NZ_CAJZAS010000182.1 Protein Homology CDS 10270 11127 . + 0 ID=cds-WP_059530392.1;Parent=gene-LDO45_RS15380;Dbxref=GenBank:WP_059530392.1;Name=WP_059530392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485105.1;locus_tag=LDO45_RS15380;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=WP_059530392.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 11161 12000 . - . ID=gene-LDO45_RS15385;Name=LDO45_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15385;old_locus_tag=BDI4_290012 NZ_CAJZAS010000182.1 Protein Homology CDS 11161 12000 . - 0 ID=cds-WP_223962363.1;Parent=gene-LDO45_RS15385;Dbxref=GenBank:WP_223962363.1;Name=WP_223962363.1;Ontology_term=GO:0008803;gbkey=CDS;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765015.1;locus_tag=LDO45_RS15385;product=symmetrical bis(5'-nucleosyl)-tetraphosphatase;protein_id=WP_223962363.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 12345 13406 . + . ID=gene-LDO45_RS15390;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=LDO45_RS15390;old_locus_tag=BDI4_290013 NZ_CAJZAS010000182.1 Protein Homology CDS 12345 13406 . + 0 ID=cds-WP_223962365.1;Parent=gene-LDO45_RS15390;Dbxref=GenBank:WP_223962365.1;Name=WP_223962365.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406347.1;locus_tag=LDO45_RS15390;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_223962365.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 13418 14311 . + . ID=gene-LDO45_RS15395;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=LDO45_RS15395;old_locus_tag=BDI4_290014 NZ_CAJZAS010000182.1 Protein Homology CDS 13418 14311 . + 0 ID=cds-WP_223962367.1;Parent=gene-LDO45_RS15395;Dbxref=GenBank:WP_223962367.1;Name=WP_223962367.1;Ontology_term=GO:0019305,GO:0045226,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA,extracellular polysaccharide biosynthetic process|0045226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328029.1;locus_tag=LDO45_RS15395;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_223962367.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 14296 14847 . + . ID=gene-LDO45_RS15400;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=LDO45_RS15400;old_locus_tag=BDI4_290015 NZ_CAJZAS010000182.1 Protein Homology CDS 14296 14847 . + 0 ID=cds-WP_059807525.1;Parent=gene-LDO45_RS15400;Dbxref=GenBank:WP_059807525.1;Name=WP_059807525.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006048651.1;locus_tag=LDO45_RS15400;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_059807525.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 14840 15739 . + . ID=gene-LDO45_RS15405;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=LDO45_RS15405;old_locus_tag=BDI4_290016 NZ_CAJZAS010000182.1 Protein Homology CDS 14840 15739 . + 0 ID=cds-WP_060297501.1;Parent=gene-LDO45_RS15405;Dbxref=GenBank:WP_060297501.1;Name=WP_060297501.1;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363225.1;locus_tag=LDO45_RS15405;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_060297501.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 15913 16608 . + . ID=gene-LDO45_RS15410;Name=LDO45_RS15410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15410;old_locus_tag=BDI4_290017 NZ_CAJZAS010000182.1 GeneMarkS-2+ CDS 15913 16608 . + 0 ID=cds-WP_223962369.1;Parent=gene-LDO45_RS15410;Dbxref=GenBank:WP_223962369.1;Name=WP_223962369.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS15410;product=hypothetical protein;protein_id=WP_223962369.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 16695 20105 . + . ID=gene-LDO45_RS15415;Name=LDO45_RS15415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15415;old_locus_tag=BDI4_290019 NZ_CAJZAS010000182.1 Protein Homology CDS 16695 20105 . + 0 ID=cds-WP_223962371.1;Parent=gene-LDO45_RS15415;Dbxref=GenBank:WP_223962371.1;Name=WP_223962371.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF045194.2;locus_tag=LDO45_RS15415;product=glycosyltransferase;protein_id=WP_223962371.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 20293 21105 . + . ID=gene-LDO45_RS15420;Name=LDO45_RS15420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15420;old_locus_tag=BDI4_290021 NZ_CAJZAS010000182.1 Protein Homology CDS 20293 21105 . + 0 ID=cds-WP_223962373.1;Parent=gene-LDO45_RS15420;Dbxref=GenBank:WP_223962373.1;Name=WP_223962373.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF013245.5;locus_tag=LDO45_RS15420;product=ABC transporter permease;protein_id=WP_223962373.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 21122 22507 . + . ID=gene-LDO45_RS15425;Name=LDO45_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15425;old_locus_tag=BDI4_290022 NZ_CAJZAS010000182.1 Protein Homology CDS 21122 22507 . + 0 ID=cds-WP_223962375.1;Parent=gene-LDO45_RS15425;Dbxref=GenBank:WP_223962375.1;Name=WP_223962375.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF012235.5;locus_tag=LDO45_RS15425;product=ABC transporter ATP-binding protein;protein_id=WP_223962375.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 22539 23144 . + . ID=gene-LDO45_RS15430;Name=LDO45_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15430;old_locus_tag=BDI4_290023 NZ_CAJZAS010000182.1 Protein Homology CDS 22539 23144 . + 0 ID=cds-WP_170296616.1;Parent=gene-LDO45_RS15430;Dbxref=GenBank:WP_170296616.1;Name=WP_170296616.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012360.5;locus_tag=LDO45_RS15430;product=acyltransferase;protein_id=WP_170296616.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 23281 24348 . + . ID=gene-LDO45_RS15435;Name=LDO45_RS15435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15435;old_locus_tag=BDI4_290025 NZ_CAJZAS010000182.1 GeneMarkS-2+ CDS 23281 24348 . + 0 ID=cds-WP_223962377.1;Parent=gene-LDO45_RS15435;Dbxref=GenBank:WP_223962377.1;Name=WP_223962377.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS15435;product=hypothetical protein;protein_id=WP_223962377.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 24510 26735 . + . ID=gene-LDO45_RS15440;Name=LDO45_RS15440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15440;old_locus_tag=BDI4_290026 NZ_CAJZAS010000182.1 Protein Homology CDS 24510 26735 . + 0 ID=cds-WP_223962379.1;Parent=gene-LDO45_RS15440;Dbxref=GenBank:WP_223962379.1;Name=WP_223962379.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF045194.2;locus_tag=LDO45_RS15440;product=glycosyltransferase;protein_id=WP_223962379.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 26732 27844 . + . ID=gene-LDO45_RS15445;Name=LDO45_RS15445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15445;old_locus_tag=BDI4_290027 NZ_CAJZAS010000182.1 Protein Homology CDS 26732 27844 . + 0 ID=cds-WP_223962381.1;Parent=gene-LDO45_RS15445;Dbxref=GenBank:WP_223962381.1;Name=WP_223962381.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF045194.2;locus_tag=LDO45_RS15445;product=glycosyltransferase family 4 protein;protein_id=WP_223962381.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 27915 29978 . + . ID=gene-LDO45_RS15450;Name=LDO45_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15450;old_locus_tag=BDI4_290028 NZ_CAJZAS010000182.1 Protein Homology CDS 27915 29978 . + 0 ID=cds-WP_223962383.1;Parent=gene-LDO45_RS15450;Dbxref=GenBank:WP_223962383.1;Name=WP_223962383.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602560.1;locus_tag=LDO45_RS15450;product=acyltransferase family protein;protein_id=WP_223962383.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 30067 30405 . + . ID=gene-LDO45_RS34140;Name=LDO45_RS34140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34140 NZ_CAJZAS010000182.1 Protein Homology CDS 30067 30405 . + 0 ID=cds-WP_253074749.1;Parent=gene-LDO45_RS34140;Dbxref=GenBank:WP_253074749.1;Name=WP_253074749.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF013884.5;locus_tag=LDO45_RS34140;product=acyltransferase;protein_id=WP_253074749.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 30387 31220 . + . ID=gene-LDO45_RS15455;Name=LDO45_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15455;old_locus_tag=BDI4_290030 NZ_CAJZAS010000182.1 Protein Homology CDS 30387 31220 . + 0 ID=cds-WP_253074750.1;Parent=gene-LDO45_RS15455;Dbxref=GenBank:WP_253074750.1;Name=WP_253074750.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF013884.5;locus_tag=LDO45_RS15455;product=acyltransferase;protein_id=WP_253074750.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 31280 32179 . - . ID=gene-LDO45_RS15460;Name=LDO45_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15460;old_locus_tag=BDI4_290032 NZ_CAJZAS010000182.1 Protein Homology CDS 31280 32179 . - 0 ID=cds-WP_223962386.1;Parent=gene-LDO45_RS15460;Dbxref=GenBank:WP_223962386.1;Name=WP_223962386.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020604.5;locus_tag=LDO45_RS15460;product=Stf0 family sulfotransferase;protein_id=WP_223962386.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 32230 33336 . - . ID=gene-LDO45_RS15465;Name=LDO45_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15465;old_locus_tag=BDI4_290033 NZ_CAJZAS010000182.1 Protein Homology CDS 32230 33336 . - 0 ID=cds-WP_223962388.1;Parent=gene-LDO45_RS15465;Dbxref=GenBank:WP_223962388.1;Name=WP_223962388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012356725.1;locus_tag=LDO45_RS15465;product=glycosyltransferase family 4 protein;protein_id=WP_223962388.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 33416 34864 . - . ID=gene-LDO45_RS15470;Name=LDO45_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15470;old_locus_tag=BDI4_290035 NZ_CAJZAS010000182.1 Protein Homology CDS 33416 34864 . - 0 ID=cds-WP_223962390.1;Parent=gene-LDO45_RS15470;Dbxref=GenBank:WP_223962390.1;Name=WP_223962390.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011615902.1;locus_tag=LDO45_RS15470;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=WP_223962390.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 35427 36611 . + . ID=gene-LDO45_RS15475;Name=LDO45_RS15475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15475;old_locus_tag=BDI4_290038 NZ_CAJZAS010000182.1 Protein Homology CDS 35427 36611 . + 0 ID=cds-WP_223962392.1;Parent=gene-LDO45_RS15475;Dbxref=GenBank:WP_223962392.1;Name=WP_223962392.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF024831.5;locus_tag=LDO45_RS15475;product=glycosyltransferase family 1 protein;protein_id=WP_223962392.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 36663 37625 . + . ID=gene-LDO45_RS15480;Name=LDO45_RS15480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15480;old_locus_tag=BDI4_290039 NZ_CAJZAS010000182.1 Protein Homology CDS 36663 37625 . + 0 ID=cds-WP_223962394.1;Parent=gene-LDO45_RS15480;Dbxref=GenBank:WP_223962394.1;Name=WP_223962394.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656142.1;locus_tag=LDO45_RS15480;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_223962394.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 37630 38640 . + . ID=gene-LDO45_RS15485;Name=LDO45_RS15485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15485;old_locus_tag=BDI4_290040 NZ_CAJZAS010000182.1 Protein Homology CDS 37630 38640 . + 0 ID=cds-WP_223962396.1;Parent=gene-LDO45_RS15485;Dbxref=GenBank:WP_223962396.1;Name=WP_223962396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764992.1;locus_tag=LDO45_RS15485;product=glycosyltransferase family 4 protein;protein_id=WP_223962396.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 38660 40543 . + . ID=gene-LDO45_RS15490;Name=LDO45_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15490;old_locus_tag=BDI4_290041 NZ_CAJZAS010000182.1 Protein Homology CDS 38660 40543 . + 0 ID=cds-WP_223962398.1;Parent=gene-LDO45_RS15490;Dbxref=GenBank:WP_223962398.1;Name=WP_223962398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363237.1;locus_tag=LDO45_RS15490;product=nucleoside-diphosphate sugar epimerase/dehydratase;protein_id=WP_223962398.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 40620 41726 . - . ID=gene-LDO45_RS15495;Name=LDO45_RS15495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15495;old_locus_tag=BDI4_290042 NZ_CAJZAS010000182.1 Protein Homology CDS 40620 41726 . - 0 ID=cds-WP_223962400.1;Parent=gene-LDO45_RS15495;Dbxref=GenBank:WP_223962400.1;Name=WP_223962400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363239.1;locus_tag=LDO45_RS15495;product=glycosyltransferase;protein_id=WP_223962400.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 41754 42776 . - . ID=gene-LDO45_RS15500;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=LDO45_RS15500;old_locus_tag=BDI4_290043 NZ_CAJZAS010000182.1 Protein Homology CDS 41754 42776 . - 0 ID=cds-WP_059530331.1;Parent=gene-LDO45_RS15500;Dbxref=GenBank:WP_059530331.1;Name=WP_059530331.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527590.1;locus_tag=LDO45_RS15500;product=UDP-glucose 4-epimerase GalE;protein_id=WP_059530331.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 42791 43927 . - . ID=gene-LDO45_RS15505;Name=LDO45_RS15505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15505;old_locus_tag=BDI4_290044 NZ_CAJZAS010000182.1 Protein Homology CDS 42791 43927 . - 0 ID=cds-WP_223962401.1;Parent=gene-LDO45_RS15505;Dbxref=GenBank:WP_223962401.1;Name=WP_223962401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485113.1;locus_tag=LDO45_RS15505;product=glycosyltransferase family 4 protein;protein_id=WP_223962401.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 43970 44794 . - . ID=gene-LDO45_RS15510;Name=LDO45_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15510;old_locus_tag=BDI4_290045 NZ_CAJZAS010000182.1 Protein Homology CDS 43970 44794 . - 0 ID=cds-WP_059530325.1;Parent=gene-LDO45_RS15510;Dbxref=GenBank:WP_059530325.1;Name=WP_059530325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476710.1;locus_tag=LDO45_RS15510;product=glycosyltransferase;protein_id=WP_059530325.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 44791 46047 . - . ID=gene-LDO45_RS15515;Name=LDO45_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15515;old_locus_tag=BDI4_290046 NZ_CAJZAS010000182.1 Protein Homology CDS 44791 46047 . - 0 ID=cds-WP_175907555.1;Parent=gene-LDO45_RS15515;Dbxref=GenBank:WP_175907555.1;Name=WP_175907555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751076.1;locus_tag=LDO45_RS15515;product=lipopolysaccharide biosynthesis protein;protein_id=WP_175907555.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 46290 47684 . + . ID=gene-LDO45_RS15520;Name=LDO45_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15520;old_locus_tag=BDI4_290047 NZ_CAJZAS010000182.1 Protein Homology CDS 46290 47684 . + 0 ID=cds-WP_059690756.1;Parent=gene-LDO45_RS15520;Dbxref=GenBank:WP_059690756.1;Name=WP_059690756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897868.1;locus_tag=LDO45_RS15520;product=phosphomannomutase/phosphoglucomutase;protein_id=WP_059690756.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 47862 48857 . + . ID=gene-LDO45_RS15525;Name=waaC;gbkey=Gene;gene=waaC;gene_biotype=protein_coding;locus_tag=LDO45_RS15525;old_locus_tag=BDI4_290048 NZ_CAJZAS010000182.1 Protein Homology CDS 47862 48857 . + 0 ID=cds-WP_059530317.1;Parent=gene-LDO45_RS15525;Dbxref=GenBank:WP_059530317.1;Name=WP_059530317.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=waaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363245.1;locus_tag=LDO45_RS15525;product=lipopolysaccharide heptosyltransferase I;protein_id=WP_059530317.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 48901 49785 . + . ID=gene-LDO45_RS15530;Name=LDO45_RS15530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15530;old_locus_tag=BDI4_290049 NZ_CAJZAS010000182.1 Protein Homology CDS 48901 49785 . + 0 ID=cds-WP_059530314.1;Parent=gene-LDO45_RS15530;Dbxref=GenBank:WP_059530314.1;Name=WP_059530314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332912.1;locus_tag=LDO45_RS15530;product=Kdo hydroxylase family protein;protein_id=WP_059530314.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 49823 51181 . + . ID=gene-LDO45_RS15535;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=LDO45_RS15535;old_locus_tag=BDI4_290051 NZ_CAJZAS010000182.1 Protein Homology CDS 49823 51181 . + 0 ID=cds-WP_223962402.1;Parent=gene-LDO45_RS15535;Dbxref=GenBank:WP_223962402.1;Name=WP_223962402.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897865.1;locus_tag=LDO45_RS15535;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_223962402.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 51244 51891 . - . ID=gene-LDO45_RS15540;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=LDO45_RS15540;old_locus_tag=BDI4_290052 NZ_CAJZAS010000182.1 Protein Homology CDS 51244 51891 . - 0 ID=cds-WP_223962403.1;Parent=gene-LDO45_RS15540;Dbxref=GenBank:WP_223962403.1;Name=WP_223962403.1;Ontology_term=GO:0019627,GO:0003924,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=GTPase activity|0003924||IEA,metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656154.1;locus_tag=LDO45_RS15540;product=urease accessory protein UreG;protein_id=WP_223962403.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 51906 52586 . - . ID=gene-LDO45_RS15545;Name=LDO45_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15545;old_locus_tag=BDI4_290053 NZ_CAJZAS010000182.1 Protein Homology CDS 51906 52586 . - 0 ID=cds-WP_059699393.1;Parent=gene-LDO45_RS15545;Dbxref=GenBank:WP_059699393.1;Name=WP_059699393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601275.1;locus_tag=LDO45_RS15545;product=urease accessory protein UreF;protein_id=WP_059699393.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 52573 53199 . - . ID=gene-LDO45_RS15550;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=LDO45_RS15550;old_locus_tag=BDI4_290054 NZ_CAJZAS010000182.1 Protein Homology CDS 52573 53199 . - 0 ID=cds-WP_223962405.1;Parent=gene-LDO45_RS15550;Dbxref=GenBank:WP_223962405.1;Name=WP_223962405.1;Ontology_term=GO:0019627,GO:0016151;gbkey=CDS;gene=ureE;go_function=nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752111.1;locus_tag=LDO45_RS15550;product=urease accessory protein UreE;protein_id=WP_223962405.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 53218 54924 . - . ID=gene-LDO45_RS15555;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=LDO45_RS15555;old_locus_tag=BDI4_290055 NZ_CAJZAS010000182.1 Protein Homology CDS 53218 54924 . - 0 ID=cds-WP_059699397.1;Parent=gene-LDO45_RS15555;Dbxref=GenBank:WP_059699397.1;Name=WP_059699397.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758739.1;locus_tag=LDO45_RS15555;product=urease subunit alpha;protein_id=WP_059699397.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 54953 55258 . - . ID=gene-LDO45_RS15560;Name=LDO45_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15560;old_locus_tag=BDI4_290056 NZ_CAJZAS010000182.1 Protein Homology CDS 54953 55258 . - 0 ID=cds-WP_059448107.1;Parent=gene-LDO45_RS15560;Dbxref=GenBank:WP_059448107.1;Name=WP_059448107.1;Ontology_term=GO:0043419,GO:0035550;gbkey=CDS;go_component=urease complex|0035550||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332918.1;locus_tag=LDO45_RS15560;product=urease subunit beta;protein_id=WP_059448107.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 55273 55575 . - . ID=gene-LDO45_RS15565;Name=ureA;gbkey=Gene;gene=ureA;gene_biotype=protein_coding;locus_tag=LDO45_RS15565;old_locus_tag=BDI4_290057 NZ_CAJZAS010000182.1 Protein Homology CDS 55273 55575 . - 0 ID=cds-WP_006048588.1;Parent=gene-LDO45_RS15565;Dbxref=GenBank:WP_006048588.1;Name=WP_006048588.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureA;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008923043.1;locus_tag=LDO45_RS15565;product=urease subunit gamma;protein_id=WP_006048588.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 55812 56687 . - . ID=gene-LDO45_RS15570;Name=LDO45_RS15570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15570;old_locus_tag=BDI4_290058 NZ_CAJZAS010000182.1 Protein Homology CDS 55812 56687 . - 0 ID=cds-WP_223962407.1;Parent=gene-LDO45_RS15570;Dbxref=GenBank:WP_223962407.1;Name=WP_223962407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758742.1;locus_tag=LDO45_RS15570;product=urease accessory protein UreD;protein_id=WP_223962407.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 56872 57564 . - . ID=gene-LDO45_RS15575;Name=urtE;gbkey=Gene;gene=urtE;gene_biotype=protein_coding;locus_tag=LDO45_RS15575;old_locus_tag=BDI4_290059 NZ_CAJZAS010000182.1 Protein Homology CDS 56872 57564 . - 0 ID=cds-WP_059690763.1;Parent=gene-LDO45_RS15575;Dbxref=GenBank:WP_059690763.1;Name=WP_059690763.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtE;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332923.1;locus_tag=LDO45_RS15575;product=urea ABC transporter ATP-binding subunit UrtE;protein_id=WP_059690763.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 57569 58426 . - . ID=gene-LDO45_RS15580;Name=urtD;gbkey=Gene;gene=urtD;gene_biotype=protein_coding;locus_tag=LDO45_RS15580;old_locus_tag=BDI4_290060 NZ_CAJZAS010000182.1 Protein Homology CDS 57569 58426 . - 0 ID=cds-WP_059530295.1;Parent=gene-LDO45_RS15580;Dbxref=GenBank:WP_059530295.1;Name=WP_059530295.1;Ontology_term=GO:0015840,GO:0005524,GO:0033221,GO:0009898,GO:0055052;gbkey=CDS;gene=urtD;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406305.1;locus_tag=LDO45_RS15580;product=urea ABC transporter ATP-binding protein UrtD;protein_id=WP_059530295.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 58423 59610 . - . ID=gene-LDO45_RS15585;Name=urtC;gbkey=Gene;gene=urtC;gene_biotype=protein_coding;locus_tag=LDO45_RS15585;old_locus_tag=BDI4_290061 NZ_CAJZAS010000182.1 Protein Homology CDS 58423 59610 . - 0 ID=cds-WP_223962409.1;Parent=gene-LDO45_RS15585;Dbxref=GenBank:WP_223962409.1;Name=WP_223962409.1;Ontology_term=GO:0015840,GO:0033221,GO:0005886,GO:0055052;gbkey=CDS;gene=urtC;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328050.1;locus_tag=LDO45_RS15585;product=urea ABC transporter permease subunit UrtC;protein_id=WP_223962409.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 59612 61231 . - . ID=gene-LDO45_RS15590;Name=urtB;gbkey=Gene;gene=urtB;gene_biotype=protein_coding;locus_tag=LDO45_RS15590;old_locus_tag=BDI4_290062 NZ_CAJZAS010000182.1 Protein Homology CDS 59612 61231 . - 0 ID=cds-WP_223962411.1;Parent=gene-LDO45_RS15590;Dbxref=GenBank:WP_223962411.1;Name=WP_223962411.1;Ontology_term=GO:0015840,GO:0033221,GO:0005886,GO:0055052;gbkey=CDS;gene=urtB;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488541.1;locus_tag=LDO45_RS15590;product=urea ABC transporter permease subunit UrtB;protein_id=WP_223962411.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 61372 62679 . - . ID=gene-LDO45_RS15595;Name=urtA;gbkey=Gene;gene=urtA;gene_biotype=protein_coding;locus_tag=LDO45_RS15595;old_locus_tag=BDI4_290063 NZ_CAJZAS010000182.1 Protein Homology CDS 61372 62679 . - 0 ID=cds-WP_059530287.1;Parent=gene-LDO45_RS15595;Dbxref=GenBank:WP_059530287.1;Name=WP_059530287.1;Ontology_term=GO:0015840,GO:0033219,GO:0033221,GO:0030288,GO:0055052;gbkey=CDS;gene=urtA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=urea binding|0033219||IEA,ATPase-coupled urea transmembrane transporter activity|0033221||IEA;go_process=urea transport|0015840||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476693.1;locus_tag=LDO45_RS15595;product=urea ABC transporter substrate-binding protein;protein_id=WP_059530287.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 63213 63536 . - . ID=gene-LDO45_RS15600;Name=LDO45_RS15600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15600;old_locus_tag=BDI4_290065 NZ_CAJZAS010000182.1 Protein Homology CDS 63213 63536 . - 0 ID=cds-WP_059530285.1;Parent=gene-LDO45_RS15600;Dbxref=GenBank:WP_059530285.1;Name=WP_059530285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091617.1;locus_tag=LDO45_RS15600;product=rhodanese-like domain-containing protein;protein_id=WP_059530285.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 63551 64207 . - . ID=gene-LDO45_RS15605;Name=LDO45_RS15605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15605;old_locus_tag=BDI4_290066 NZ_CAJZAS010000182.1 Protein Homology CDS 63551 64207 . - 0 ID=cds-WP_059530282.1;Parent=gene-LDO45_RS15605;Dbxref=GenBank:WP_059530282.1;Name=WP_059530282.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332930.1;locus_tag=LDO45_RS15605;product=protein-L-isoaspartate O-methyltransferase;protein_id=WP_059530282.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 64312 64569 . - . ID=gene-LDO45_RS15610;Name=LDO45_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15610;old_locus_tag=BDI4_290067 NZ_CAJZAS010000182.1 Protein Homology CDS 64312 64569 . - 0 ID=cds-WP_059448113.1;Parent=gene-LDO45_RS15610;Dbxref=GenBank:WP_059448113.1;Name=WP_059448113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752100.1;locus_tag=LDO45_RS15610;product=hypothetical protein;protein_id=WP_059448113.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 64642 66033 . - . ID=gene-LDO45_RS15615;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=LDO45_RS15615;old_locus_tag=BDI4_290068 NZ_CAJZAS010000182.1 Protein Homology CDS 64642 66033 . - 0 ID=cds-WP_223962413.1;Parent=gene-LDO45_RS15615;Dbxref=GenBank:WP_223962413.1;Name=WP_223962413.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363257.1;locus_tag=LDO45_RS15615;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_223962413.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 66204 66527 . + . ID=gene-LDO45_RS15620;Name=LDO45_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15620;old_locus_tag=BDI4_290070 NZ_CAJZAS010000182.1 Protein Homology CDS 66204 66527 . + 0 ID=cds-WP_374109537.1;Parent=gene-LDO45_RS15620;Dbxref=GenBank:WP_374109537.1;Name=WP_374109537.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400909.1;locus_tag=LDO45_RS15620;product=YkgJ family cysteine cluster protein;protein_id=WP_374109537.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 66669 67250 . + . ID=gene-LDO45_RS15625;Name=LDO45_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15625;old_locus_tag=BDI4_290071 NZ_CAJZAS010000182.1 Protein Homology CDS 66669 67250 . + 0 ID=cds-WP_059820188.1;Parent=gene-LDO45_RS15625;Dbxref=GenBank:WP_059820188.1;Name=WP_059820188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400908.1;locus_tag=LDO45_RS15625;product=DUF1439 domain-containing protein;protein_id=WP_059820188.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 67329 68159 . + . ID=gene-LDO45_RS15630;Name=LDO45_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15630;old_locus_tag=BDI4_290072 NZ_CAJZAS010000182.1 Protein Homology CDS 67329 68159 . + 0 ID=cds-WP_059820189.1;Parent=gene-LDO45_RS15630;Dbxref=GenBank:WP_059820189.1;Name=WP_059820189.1;Ontology_term=GO:0016311,GO:0050380,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488560.1;locus_tag=LDO45_RS15630;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_059820189.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 68270 69037 . - . ID=gene-LDO45_RS15635;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=LDO45_RS15635;old_locus_tag=BDI4_290073 NZ_CAJZAS010000182.1 Protein Homology CDS 68270 69037 . - 0 ID=cds-WP_223962418.1;Parent=gene-LDO45_RS15635;Dbxref=GenBank:WP_223962418.1;Name=WP_223962418.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752095.1;locus_tag=LDO45_RS15635;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_223962418.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 69170 69244 . - . ID=gene-LDO45_RS15640;Name=LDO45_RS15640;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS15640;old_locus_tag=BDI4_TRNA43 NZ_CAJZAS010000182.1 tRNAscan-SE tRNA 69170 69244 . - . ID=rna-LDO45_RS15640;Parent=gene-LDO45_RS15640;anticodon=(pos:complement(69209..69211));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS15640;product=tRNA-Gly NZ_CAJZAS010000182.1 tRNAscan-SE exon 69170 69244 . - . ID=exon-LDO45_RS15640-1;Parent=rna-LDO45_RS15640;anticodon=(pos:complement(69209..69211));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS15640;product=tRNA-Gly NZ_CAJZAS010000182.1 RefSeq gene 69535 69879 . + . ID=gene-LDO45_RS15645;Name=LDO45_RS15645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15645;old_locus_tag=BDI4_290075 NZ_CAJZAS010000182.1 Protein Homology CDS 69535 69879 . + 0 ID=cds-WP_059466993.1;Parent=gene-LDO45_RS15645;Dbxref=GenBank:WP_059466993.1;Name=WP_059466993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003258412.1;locus_tag=LDO45_RS15645;product=cupin domain-containing protein;protein_id=WP_059466993.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 70179 70385 . - . ID=gene-LDO45_RS15650;Name=LDO45_RS15650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15650;old_locus_tag=BDI4_290076 NZ_CAJZAS010000182.1 Protein Homology CDS 70179 70385 . - 0 ID=cds-WP_059530263.1;Parent=gene-LDO45_RS15650;Dbxref=GenBank:WP_059530263.1;Name=WP_059530263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752092.1;locus_tag=LDO45_RS15650;product=hypothetical protein;protein_id=WP_059530263.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 70395 70607 . - . ID=gene-LDO45_RS15655;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=LDO45_RS15655;old_locus_tag=BDI4_290077 NZ_CAJZAS010000182.1 Protein Homology CDS 70395 70607 . - 0 ID=cds-WP_059530260.1;Parent=gene-LDO45_RS15655;Dbxref=GenBank:WP_059530260.1;Name=WP_059530260.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202502.1;locus_tag=LDO45_RS15655;product=30S ribosomal protein S21;protein_id=WP_059530260.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 70642 70851 . - . ID=gene-LDO45_RS15660;Name=LDO45_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15660;old_locus_tag=BDI4_290078 NZ_CAJZAS010000182.1 Protein Homology CDS 70642 70851 . - 0 ID=cds-WP_059530257.1;Parent=gene-LDO45_RS15660;Dbxref=GenBank:WP_059530257.1;Name=WP_059530257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402909.1;locus_tag=LDO45_RS15660;product=hypothetical protein;protein_id=WP_059530257.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 70899 71183 . - . ID=gene-LDO45_RS15665;Name=LDO45_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15665;old_locus_tag=BDI4_290079 NZ_CAJZAS010000182.1 Protein Homology CDS 70899 71183 . - 0 ID=cds-WP_059530254.1;Parent=gene-LDO45_RS15665;Dbxref=GenBank:WP_059530254.1;Name=WP_059530254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656171.1;locus_tag=LDO45_RS15665;product=hypothetical protein;protein_id=WP_059530254.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 71664 72824 . + . ID=gene-LDO45_RS15670;Name=LDO45_RS15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15670;old_locus_tag=BDI4_290080 NZ_CAJZAS010000182.1 Protein Homology CDS 71664 72824 . + 0 ID=cds-WP_223962420.1;Parent=gene-LDO45_RS15670;Dbxref=GenBank:WP_223962420.1;Name=WP_223962420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752088.1;locus_tag=LDO45_RS15670;product=enolase C-terminal domain-like protein;protein_id=WP_223962420.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 73043 73798 . - . ID=gene-LDO45_RS15675;Name=LDO45_RS15675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15675;old_locus_tag=BDI4_290082 NZ_CAJZAS010000182.1 Protein Homology CDS 73043 73798 . - 0 ID=cds-WP_223962422.1;Parent=gene-LDO45_RS15675;Dbxref=GenBank:WP_223962422.1;Name=WP_223962422.1;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897830.1;locus_tag=LDO45_RS15675;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_223962422.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 73880 74485 . + . ID=gene-LDO45_RS15680;Name=LDO45_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15680;old_locus_tag=BDI4_290081 NZ_CAJZAS010000182.1 Protein Homology CDS 73880 74485 . + 0 ID=cds-WP_059530245.1;Parent=gene-LDO45_RS15680;Dbxref=GenBank:WP_059530245.1;Name=WP_059530245.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656175.1;locus_tag=LDO45_RS15680;product=NUDIX domain-containing protein;protein_id=WP_059530245.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 74565 75440 . + . ID=gene-LDO45_RS15685;Name=LDO45_RS15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15685;old_locus_tag=BDI4_290083 NZ_CAJZAS010000182.1 Protein Homology CDS 74565 75440 . + 0 ID=cds-WP_223962424.1;Parent=gene-LDO45_RS15685;Dbxref=GenBank:WP_223962424.1;Name=WP_223962424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758760.1;locus_tag=LDO45_RS15685;product=Sir2 family NAD-dependent protein deacetylase;protein_id=WP_223962424.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 75478 76689 . - . ID=gene-LDO45_RS15690;Name=LDO45_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15690;old_locus_tag=BDI4_290084 NZ_CAJZAS010000182.1 Protein Homology CDS 75478 76689 . - 0 ID=cds-WP_223962426.1;Parent=gene-LDO45_RS15690;Dbxref=GenBank:WP_223962426.1;Name=WP_223962426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752084.1;locus_tag=LDO45_RS15690;product=S53 family peptidase;protein_id=WP_223962426.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 76815 77075 . - . ID=gene-LDO45_RS15695;Name=LDO45_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15695 NZ_CAJZAS010000182.1 GeneMarkS-2+ CDS 76815 77075 . - 0 ID=cds-WP_223962428.1;Parent=gene-LDO45_RS15695;Dbxref=GenBank:WP_223962428.1;Name=WP_223962428.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS15695;product=hypothetical protein;protein_id=WP_223962428.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 77101 77487 . + . ID=gene-LDO45_RS15700;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=LDO45_RS15700;old_locus_tag=BDI4_290086 NZ_CAJZAS010000182.1 Protein Homology CDS 77101 77487 . + 0 ID=cds-WP_223962429.1;Parent=gene-LDO45_RS15700;Dbxref=GenBank:WP_223962429.1;Name=WP_223962429.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522284.1;locus_tag=LDO45_RS15700;product=fluoride efflux transporter CrcB;protein_id=WP_223962429.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 77512 77862 . + . ID=gene-LDO45_RS15705;Name=LDO45_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15705;old_locus_tag=BDI4_290087 NZ_CAJZAS010000182.1 Protein Homology CDS 77512 77862 . + 0 ID=cds-WP_059690770.1;Parent=gene-LDO45_RS15705;Dbxref=GenBank:WP_059690770.1;Name=WP_059690770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897825.1;locus_tag=LDO45_RS15705;product=DUF190 domain-containing protein;protein_id=WP_059690770.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 77872 78435 . - . ID=gene-LDO45_RS15710;Name=LDO45_RS15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15710;old_locus_tag=BDI4_290088 NZ_CAJZAS010000182.1 Protein Homology CDS 77872 78435 . - 0 ID=cds-WP_059530230.1;Parent=gene-LDO45_RS15710;Dbxref=GenBank:WP_059530230.1;Name=WP_059530230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010116661.1;locus_tag=LDO45_RS15710;product=YggT family protein;protein_id=WP_059530230.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 78512 79441 . - . ID=gene-LDO45_RS15715;Name=LDO45_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15715;old_locus_tag=BDI4_290089 NZ_CAJZAS010000182.1 Protein Homology CDS 78512 79441 . - 0 ID=cds-WP_059699410.1;Parent=gene-LDO45_RS15715;Dbxref=GenBank:WP_059699410.1;Name=WP_059699410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496606.1;locus_tag=LDO45_RS15715;product=Rossmann-like and DUF2520 domain-containing protein;protein_id=WP_059699410.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 79909 80205 . + . ID=gene-LDO45_RS15720;Name=LDO45_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15720;old_locus_tag=BDI4_290090 NZ_CAJZAS010000182.1 Protein Homology CDS 79909 80205 . + 0 ID=cds-WP_059467009.1;Parent=gene-LDO45_RS15720;Dbxref=GenBank:WP_059467009.1;Name=WP_059467009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488565.1;locus_tag=LDO45_RS15720;product=hypothetical protein;protein_id=WP_059467009.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 80309 80980 . - . ID=gene-LDO45_RS15725;Name=LDO45_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15725;old_locus_tag=BDI4_290091 NZ_CAJZAS010000182.1 Protein Homology CDS 80309 80980 . - 0 ID=cds-WP_223962431.1;Parent=gene-LDO45_RS15725;Dbxref=GenBank:WP_223962431.1;Name=WP_223962431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883641.1;locus_tag=LDO45_RS15725;product=LysE family translocator;protein_id=WP_223962431.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 81015 82571 . - . ID=gene-LDO45_RS15730;Name=LDO45_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15730;old_locus_tag=BDI4_290092 NZ_CAJZAS010000182.1 Protein Homology CDS 81015 82571 . - 0 ID=cds-WP_059690774.1;Parent=gene-LDO45_RS15730;Dbxref=GenBank:WP_059690774.1;Name=WP_059690774.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897820.1;locus_tag=LDO45_RS15730;product=UbiD family decarboxylase;protein_id=WP_059690774.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 83168 84298 . + . ID=gene-LDO45_RS15735;Name=LDO45_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15735;old_locus_tag=BDI4_290093 NZ_CAJZAS010000182.1 Protein Homology CDS 83168 84298 . + 0 ID=cds-WP_059530220.1;Parent=gene-LDO45_RS15735;Dbxref=GenBank:WP_059530220.1;Name=WP_059530220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400829.1;locus_tag=LDO45_RS15735;product=transglycosylase SLT domain-containing protein;protein_id=WP_059530220.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 84407 85603 . - . ID=gene-LDO45_RS15740;Name=LDO45_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15740;old_locus_tag=BDI4_290094 NZ_CAJZAS010000182.1 Protein Homology CDS 84407 85603 . - 0 ID=cds-WP_223962433.1;Parent=gene-LDO45_RS15740;Dbxref=GenBank:WP_223962433.1;Name=WP_223962433.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476663.1;locus_tag=LDO45_RS15740;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_223962433.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 85674 86111 . - . ID=gene-LDO45_RS15745;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=LDO45_RS15745;old_locus_tag=BDI4_290095 NZ_CAJZAS010000182.1 Protein Homology CDS 85674 86111 . - 0 ID=cds-WP_059530215.1;Parent=gene-LDO45_RS15745;Dbxref=GenBank:WP_059530215.1;Name=WP_059530215.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897817.1;locus_tag=LDO45_RS15745;product=transcription antitermination factor NusB;protein_id=WP_059530215.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 86108 86626 . - . ID=gene-LDO45_RS15750;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=LDO45_RS15750;old_locus_tag=BDI4_290096 NZ_CAJZAS010000182.1 Protein Homology CDS 86108 86626 . - 0 ID=cds-WP_059530212.1;Parent=gene-LDO45_RS15750;Dbxref=GenBank:WP_059530212.1;Name=WP_059530212.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012400029.1;locus_tag=LDO45_RS15750;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_059530212.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 86680 87822 . - . ID=gene-LDO45_RS15755;Name=ribBA;gbkey=Gene;gene=ribBA;gene_biotype=protein_coding;locus_tag=LDO45_RS15755;old_locus_tag=BDI4_290097 NZ_CAJZAS010000182.1 Protein Homology CDS 86680 87822 . - 0 ID=cds-WP_059530209.1;Parent=gene-LDO45_RS15755;Dbxref=GenBank:WP_059530209.1;Name=WP_059530209.1;Ontology_term=GO:0003935,GO:0008686;gbkey=CDS;gene=ribBA;go_function=GTP cyclohydrolase II activity|0003935||IEA,3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484241.1;locus_tag=LDO45_RS15755;product=bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II;protein_id=WP_059530209.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 88010 88528 . - . ID=gene-LDO45_RS15760;Name=LDO45_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15760;old_locus_tag=BDI4_290098 NZ_CAJZAS010000182.1 Protein Homology CDS 88010 88528 . - 0 ID=cds-WP_223962435.1;Parent=gene-LDO45_RS15760;Dbxref=GenBank:WP_223962435.1;Name=WP_223962435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363273.1;locus_tag=LDO45_RS15760;product=DUF1993 family protein;protein_id=WP_223962435.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 88711 89340 . - . ID=gene-LDO45_RS15765;Name=LDO45_RS15765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15765;old_locus_tag=BDI4_290099 NZ_CAJZAS010000182.1 Protein Homology CDS 88711 89340 . - 0 ID=cds-WP_059699416.1;Parent=gene-LDO45_RS15765;Dbxref=GenBank:WP_059699416.1;Name=WP_059699416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476658.1;locus_tag=LDO45_RS15765;product=riboflavin synthase;protein_id=WP_059699416.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 89355 90476 . - . ID=gene-LDO45_RS15770;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=LDO45_RS15770;old_locus_tag=BDI4_290100 NZ_CAJZAS010000182.1 Protein Homology CDS 89355 90476 . - 0 ID=cds-WP_059690777.1;Parent=gene-LDO45_RS15770;Dbxref=GenBank:WP_059690777.1;Name=WP_059690777.1;Ontology_term=GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412307.1;locus_tag=LDO45_RS15770;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_059690777.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 90492 91775 . - . ID=gene-LDO45_RS15775;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=LDO45_RS15775;old_locus_tag=BDI4_290101 NZ_CAJZAS010000182.1 Protein Homology CDS 90492 91775 . - 0 ID=cds-WP_059530198.1;Parent=gene-LDO45_RS15775;Dbxref=GenBank:WP_059530198.1;Name=WP_059530198.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410509.1;locus_tag=LDO45_RS15775;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_059530198.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 91951 92403 . - . ID=gene-LDO45_RS15780;Name=LDO45_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15780;old_locus_tag=BDI4_290102 NZ_CAJZAS010000182.1 Protein Homology CDS 91951 92403 . - 0 ID=cds-WP_059448147.1;Parent=gene-LDO45_RS15780;Dbxref=GenBank:WP_059448147.1;Name=WP_059448147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764938.1;locus_tag=LDO45_RS15780;product=hypothetical protein;protein_id=WP_059448147.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 92674 93891 . + . ID=gene-LDO45_RS15785;Name=LDO45_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15785;old_locus_tag=BDI4_290103 NZ_CAJZAS010000182.1 Protein Homology CDS 92674 93891 . + 0 ID=cds-WP_059820205.1;Parent=gene-LDO45_RS15785;Dbxref=GenBank:WP_059820205.1;Name=WP_059820205.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755083.1;locus_tag=LDO45_RS15785;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_059820205.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 93987 95915 . - . ID=gene-LDO45_RS15790;Name=LDO45_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15790;old_locus_tag=BDI4_290104 NZ_CAJZAS010000182.1 Protein Homology CDS 93987 95915 . - 0 ID=cds-WP_223962437.1;Parent=gene-LDO45_RS15790;Dbxref=GenBank:WP_223962437.1;Name=WP_223962437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410513.1;locus_tag=LDO45_RS15790;product=bifunctional transcriptional regulator/glucokinase;protein_id=WP_223962437.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 95893 96573 . - . ID=gene-LDO45_RS15795;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;locus_tag=LDO45_RS15795;old_locus_tag=BDI4_290105 NZ_CAJZAS010000182.1 Protein Homology CDS 95893 96573 . - 0 ID=cds-WP_223962439.1;Parent=gene-LDO45_RS15795;Dbxref=GenBank:WP_223962439.1;Name=WP_223962439.1;Ontology_term=GO:0005975,GO:0006098,GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;go_process=carbohydrate metabolic process|0005975||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722626.1;locus_tag=LDO45_RS15795;product=6-phosphogluconolactonase;protein_id=WP_223962439.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 96660 98129 . - . ID=gene-LDO45_RS15800;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=LDO45_RS15800;old_locus_tag=BDI4_290106 NZ_CAJZAS010000182.1 Protein Homology CDS 96660 98129 . - 0 ID=cds-WP_059530188.1;Parent=gene-LDO45_RS15800;Dbxref=GenBank:WP_059530188.1;Name=WP_059530188.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213936.1;locus_tag=LDO45_RS15800;product=glucose-6-phosphate dehydrogenase;protein_id=WP_059530188.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 98560 99807 . + . ID=gene-LDO45_RS15805;Name=LDO45_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15805;old_locus_tag=BDI4_290108 NZ_CAJZAS010000182.1 Protein Homology CDS 98560 99807 . + 0 ID=cds-WP_059530186.1;Parent=gene-LDO45_RS15805;Dbxref=GenBank:WP_059530186.1;Name=WP_059530186.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185848.1;locus_tag=LDO45_RS15805;product=ABC transporter substrate-binding protein;protein_id=WP_059530186.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 99946 100884 . + . ID=gene-LDO45_RS15810;Name=LDO45_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15810;old_locus_tag=BDI4_290109 NZ_CAJZAS010000182.1 Protein Homology CDS 99946 100884 . + 0 ID=cds-WP_059509685.1;Parent=gene-LDO45_RS15810;Dbxref=GenBank:WP_059509685.1;Name=WP_059509685.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025593.1;locus_tag=LDO45_RS15810;product=carbohydrate ABC transporter permease;protein_id=WP_059509685.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 100874 101731 . + . ID=gene-LDO45_RS15815;Name=LDO45_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15815;old_locus_tag=BDI4_290110 NZ_CAJZAS010000182.1 Protein Homology CDS 100874 101731 . + 0 ID=cds-WP_059448153.1;Parent=gene-LDO45_RS15815;Dbxref=GenBank:WP_059448153.1;Name=WP_059448153.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764932.1;locus_tag=LDO45_RS15815;product=carbohydrate ABC transporter permease;protein_id=WP_059448153.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 101844 102962 . + . ID=gene-LDO45_RS15820;Name=LDO45_RS15820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15820;old_locus_tag=BDI4_290111 NZ_CAJZAS010000182.1 Protein Homology CDS 101844 102962 . + 0 ID=cds-WP_223962441.1;Parent=gene-LDO45_RS15820;Dbxref=GenBank:WP_223962441.1;Name=WP_223962441.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440516.1;locus_tag=LDO45_RS15820;product=ABC transporter ATP-binding protein;protein_id=WP_223962441.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 103066 103689 . - . ID=gene-LDO45_RS15825;Name=LDO45_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15825;old_locus_tag=BDI4_290113 NZ_CAJZAS010000182.1 Protein Homology CDS 103066 103689 . - 0 ID=cds-WP_044846208.1;Parent=gene-LDO45_RS15825;Dbxref=GenBank:WP_044846208.1;Name=WP_044846208.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333005.1;locus_tag=LDO45_RS15825;product=trimeric intracellular cation channel family protein;protein_id=WP_044846208.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 103676 104455 . - . ID=gene-LDO45_RS15830;Name=LDO45_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15830;old_locus_tag=BDI4_290114 NZ_CAJZAS010000182.1 Protein Homology CDS 103676 104455 . - 0 ID=cds-WP_059690782.1;Parent=gene-LDO45_RS15830;Dbxref=GenBank:WP_059690782.1;Name=WP_059690782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897801.1;locus_tag=LDO45_RS15830;product=Smr/MutS family protein;protein_id=WP_059690782.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 104591 105553 . - . ID=gene-LDO45_RS15835;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=LDO45_RS15835;old_locus_tag=BDI4_290115 NZ_CAJZAS010000182.1 Protein Homology CDS 104591 105553 . - 0 ID=cds-WP_059690783.1;Parent=gene-LDO45_RS15835;Dbxref=GenBank:WP_059690783.1;Name=WP_059690783.1;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333007.1;locus_tag=LDO45_RS15835;product=thioredoxin-disulfide reductase;protein_id=WP_059690783.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 105841 108150 . + . ID=gene-LDO45_RS15840;Name=LDO45_RS15840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15840;old_locus_tag=BDI4_290117 NZ_CAJZAS010000182.1 Protein Homology CDS 105841 108150 . + 0 ID=cds-WP_059530170.1;Parent=gene-LDO45_RS15840;Dbxref=GenBank:WP_059530170.1;Name=WP_059530170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186104.1;locus_tag=LDO45_RS15840;product=DNA translocase FtsK;protein_id=WP_059530170.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 108197 108886 . + . ID=gene-LDO45_RS15845;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=LDO45_RS15845;old_locus_tag=BDI4_290118 NZ_CAJZAS010000182.1 Protein Homology CDS 108197 108886 . + 0 ID=cds-WP_059530168.1;Parent=gene-LDO45_RS15845;Dbxref=GenBank:WP_059530168.1;Name=WP_059530168.1;gbkey=CDS;gene=lolA;inference=COORDINATES: protein motif:HMM:NF000661.0;locus_tag=LDO45_RS15845;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_059530168.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 109087 110397 . + . ID=gene-LDO45_RS15850;Name=LDO45_RS15850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15850;old_locus_tag=BDI4_290120 NZ_CAJZAS010000182.1 Protein Homology CDS 109087 110397 . + 0 ID=cds-WP_014897797.1;Parent=gene-LDO45_RS15850;Dbxref=GenBank:WP_014897797.1;Name=WP_014897797.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333010.1;locus_tag=LDO45_RS15850;product=replication-associated recombination protein A;protein_id=WP_014897797.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 110633 111934 . + . ID=gene-LDO45_RS15855;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=LDO45_RS15855;old_locus_tag=BDI4_290121 NZ_CAJZAS010000182.1 Protein Homology CDS 110633 111934 . + 0 ID=cds-WP_223962443.1;Parent=gene-LDO45_RS15855;Dbxref=GenBank:WP_223962443.1;Name=WP_223962443.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904317.1;locus_tag=LDO45_RS15855;product=serine--tRNA ligase;protein_id=WP_223962443.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 112066 112156 . + . ID=gene-LDO45_RS15860;Name=LDO45_RS15860;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS15860;old_locus_tag=BDI4_TRNA9 NZ_CAJZAS010000182.1 tRNAscan-SE tRNA 112066 112156 . + . ID=rna-LDO45_RS15860;Parent=gene-LDO45_RS15860;anticodon=(pos:112100..112102);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS15860;product=tRNA-Ser NZ_CAJZAS010000182.1 tRNAscan-SE exon 112066 112156 . + . ID=exon-LDO45_RS15860-1;Parent=rna-LDO45_RS15860;anticodon=(pos:112100..112102);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS15860;product=tRNA-Ser NZ_CAJZAS010000182.1 RefSeq pseudogene 112644 113108 . + . ID=gene-LDO45_RS34585;Name=LDO45_RS34585;end_range=113108,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34585;partial=true;pseudo=true NZ_CAJZAS010000182.1 Protein Homology CDS 112644 113108 . + 0 ID=cds-LDO45_RS34585;Parent=gene-LDO45_RS34585;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=113108,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025736.5;locus_tag=LDO45_RS34585;partial=true;product=phosphatase PAP2 family protein;pseudo=true;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 113445 114980 . + . ID=gene-LDO45_RS34590;Name=LDO45_RS34590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34590 NZ_CAJZAS010000182.1 Protein Homology CDS 113445 114980 . + 0 ID=cds-WP_223962462.1;Parent=gene-LDO45_RS34590;Dbxref=GenBank:WP_223962462.1;Name=WP_223962462.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883695.1;locus_tag=LDO45_RS34590;product=methyl-accepting chemotaxis protein;protein_id=WP_223962462.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 115014 116174 . - . ID=gene-LDO45_RS15875;Name=LDO45_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15875;old_locus_tag=BDI4_290124 NZ_CAJZAS010000182.1 Protein Homology CDS 115014 116174 . - 0 ID=cds-WP_223962444.1;Parent=gene-LDO45_RS15875;Dbxref=GenBank:WP_223962444.1;Name=WP_223962444.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496590.1;locus_tag=LDO45_RS15875;product=alkane 1-monooxygenase;protein_id=WP_223962444.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 116713 117366 . + . ID=gene-LDO45_RS15880;Name=LDO45_RS15880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15880;old_locus_tag=BDI4_290125 NZ_CAJZAS010000182.1 Protein Homology CDS 116713 117366 . + 0 ID=cds-WP_223962464.1;Parent=gene-LDO45_RS15880;Dbxref=GenBank:WP_223962464.1;Name=WP_223962464.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486671.1;locus_tag=LDO45_RS15880;product=GNAT family N-acetyltransferase;protein_id=WP_223962464.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 117533 118300 . + . ID=gene-LDO45_RS15885;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=LDO45_RS15885;old_locus_tag=BDI4_290126 NZ_CAJZAS010000182.1 Protein Homology CDS 117533 118300 . + 0 ID=cds-WP_059530157.1;Parent=gene-LDO45_RS15885;Dbxref=GenBank:WP_059530157.1;Name=WP_059530157.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186698.1;locus_tag=LDO45_RS15885;product=septum site-determining protein MinC;protein_id=WP_059530157.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 118360 119175 . + . ID=gene-LDO45_RS15890;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=LDO45_RS15890;old_locus_tag=BDI4_290127 NZ_CAJZAS010000182.1 Protein Homology CDS 118360 119175 . + 0 ID=cds-WP_044849298.1;Parent=gene-LDO45_RS15890;Dbxref=GenBank:WP_044849298.1;Name=WP_044849298.1;Ontology_term=GO:0000918,GO:0016887;gbkey=CDS;gene=minD;go_function=ATP hydrolysis activity|0016887||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025606.1;locus_tag=LDO45_RS15890;product=septum site-determining protein MinD;protein_id=WP_044849298.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 119188 119442 . + . ID=gene-LDO45_RS15895;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=LDO45_RS15895;old_locus_tag=BDI4_290128 NZ_CAJZAS010000182.1 Protein Homology CDS 119188 119442 . + 0 ID=cds-WP_006486661.1;Parent=gene-LDO45_RS15895;Dbxref=GenBank:WP_006486661.1;Name=WP_006486661.1;gbkey=CDS;gene=minE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004628536.1;locus_tag=LDO45_RS15895;product=cell division topological specificity factor MinE;protein_id=WP_006486661.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 119599 120000 . + . ID=gene-LDO45_RS15900;Name=LDO45_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15900;old_locus_tag=BDI4_290129 NZ_CAJZAS010000182.1 Protein Homology CDS 119599 120000 . + 0 ID=cds-WP_059530155.1;Parent=gene-LDO45_RS15900;Dbxref=GenBank:WP_059530155.1;Name=WP_059530155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883705.1;locus_tag=LDO45_RS15900;product=YXWGXW repeat-containing protein;protein_id=WP_059530155.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 120117 121658 . - . ID=gene-LDO45_RS15905;Name=LDO45_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15905;old_locus_tag=BDI4_290131 NZ_CAJZAS010000182.1 Protein Homology CDS 120117 121658 . - 0 ID=cds-WP_223962445.1;Parent=gene-LDO45_RS15905;Dbxref=GenBank:WP_223962445.1;Name=WP_223962445.1;Ontology_term=GO:0006821,GO:0005247;gbkey=CDS;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496585.1;locus_tag=LDO45_RS15905;product=chloride channel protein;protein_id=WP_223962445.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 121834 122832 . + . ID=gene-LDO45_RS15910;Name=waaC;gbkey=Gene;gene=waaC;gene_biotype=protein_coding;locus_tag=LDO45_RS15910;old_locus_tag=BDI4_290132 NZ_CAJZAS010000182.1 Protein Homology CDS 121834 122832 . + 0 ID=cds-WP_223962446.1;Parent=gene-LDO45_RS15910;Dbxref=GenBank:WP_223962446.1;Name=WP_223962446.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=waaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750840.1;locus_tag=LDO45_RS15910;product=lipopolysaccharide heptosyltransferase I;protein_id=WP_223962446.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 122890 123069 . - . ID=gene-LDO45_RS15915;Name=LDO45_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15915;old_locus_tag=BDI4_290133 NZ_CAJZAS010000182.1 Protein Homology CDS 122890 123069 . - 0 ID=cds-WP_059530148.1;Parent=gene-LDO45_RS15915;Dbxref=GenBank:WP_059530148.1;Name=WP_059530148.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400794.1;locus_tag=LDO45_RS15915;product=hypothetical protein;protein_id=WP_059530148.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 123168 124478 . - . ID=gene-LDO45_RS15920;Name=LDO45_RS15920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15920;old_locus_tag=BDI4_290134 NZ_CAJZAS010000182.1 Protein Homology CDS 123168 124478 . - 0 ID=cds-WP_059530145.1;Parent=gene-LDO45_RS15920;Dbxref=GenBank:WP_059530145.1;Name=WP_059530145.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722645.1;locus_tag=LDO45_RS15920;product=MFS transporter;protein_id=WP_059530145.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 124780 125271 . - . ID=gene-LDO45_RS15925;Name=LDO45_RS15925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15925;old_locus_tag=BDI4_290135 NZ_CAJZAS010000182.1 Protein Homology CDS 124780 125271 . - 0 ID=cds-WP_059530142.1;Parent=gene-LDO45_RS15925;Dbxref=GenBank:WP_059530142.1;Name=WP_059530142.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091684.1;locus_tag=LDO45_RS15925;product=TonB family protein;protein_id=WP_059530142.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 125503 125796 . - . ID=gene-LDO45_RS15930;Name=LDO45_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15930;old_locus_tag=BDI4_290136 NZ_CAJZAS010000182.1 Protein Homology CDS 125503 125796 . - 0 ID=cds-WP_059530138.1;Parent=gene-LDO45_RS15930;Dbxref=GenBank:WP_059530138.1;Name=WP_059530138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400790.1;locus_tag=LDO45_RS15930;product=hypothetical protein;protein_id=WP_059530138.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 125954 126355 . - . ID=gene-LDO45_RS15935;Name=LDO45_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15935;old_locus_tag=BDI4_290137 NZ_CAJZAS010000182.1 Protein Homology CDS 125954 126355 . - 0 ID=cds-WP_223962447.1;Parent=gene-LDO45_RS15935;Dbxref=GenBank:WP_223962447.1;Name=WP_223962447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656219.1;locus_tag=LDO45_RS15935;product=hypothetical protein;protein_id=WP_223962447.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 126507 126594 . - . ID=gene-LDO45_RS15940;Name=LDO45_RS15940;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS15940;old_locus_tag=BDI4_TRNA42 NZ_CAJZAS010000182.1 tRNAscan-SE tRNA 126507 126594 . - . ID=rna-LDO45_RS15940;Parent=gene-LDO45_RS15940;anticodon=(pos:complement(126558..126560));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS15940;product=tRNA-Ser NZ_CAJZAS010000182.1 tRNAscan-SE exon 126507 126594 . - . ID=exon-LDO45_RS15940-1;Parent=rna-LDO45_RS15940;anticodon=(pos:complement(126558..126560));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS15940;product=tRNA-Ser NZ_CAJZAS010000182.1 RefSeq gene 126637 127851 . - . ID=gene-LDO45_RS15945;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=LDO45_RS15945;old_locus_tag=BDI4_290139 NZ_CAJZAS010000182.1 Protein Homology CDS 126637 127851 . - 0 ID=cds-WP_223962448.1;Parent=gene-LDO45_RS15945;Dbxref=GenBank:WP_223962448.1;Name=WP_223962448.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496579.1;locus_tag=LDO45_RS15945;product=radical SAM family heme chaperone HemW;protein_id=WP_223962448.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 127886 128515 . - . ID=gene-LDO45_RS15950;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=protein_coding;locus_tag=LDO45_RS15950;old_locus_tag=BDI4_290140 NZ_CAJZAS010000182.1 Protein Homology CDS 127886 128515 . - 0 ID=cds-WP_059530132.1;Parent=gene-LDO45_RS15950;Dbxref=GenBank:WP_059530132.1;Name=WP_059530132.1;Ontology_term=GO:0006281,GO:0035870,GO:0036222;gbkey=CDS;gene=rdgB;go_function=dITP diphosphatase activity|0035870||IEA,XTP diphosphatase activity|0036222||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656221.1;locus_tag=LDO45_RS15950;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;protein_id=WP_059530132.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 128508 129248 . - . ID=gene-LDO45_RS15955;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=LDO45_RS15955;old_locus_tag=BDI4_290141 NZ_CAJZAS010000182.1 Protein Homology CDS 128508 129248 . - 0 ID=cds-WP_059530129.1;Parent=gene-LDO45_RS15955;Dbxref=GenBank:WP_059530129.1;Name=WP_059530129.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883725.1;locus_tag=LDO45_RS15955;product=ribonuclease PH;protein_id=WP_059530129.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 129424 130347 . + . ID=gene-LDO45_RS15960;Name=LDO45_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15960;old_locus_tag=BDI4_290142 NZ_CAJZAS010000182.1 Protein Homology CDS 129424 130347 . + 0 ID=cds-WP_223962449.1;Parent=gene-LDO45_RS15960;Dbxref=GenBank:WP_223962449.1;Name=WP_223962449.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333042.1;locus_tag=LDO45_RS15960;product=YicC/YloC family endoribonuclease;protein_id=WP_223962449.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 130354 131037 . + . ID=gene-LDO45_RS15965;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=LDO45_RS15965;old_locus_tag=BDI4_290143 NZ_CAJZAS010000182.1 Protein Homology CDS 130354 131037 . + 0 ID=cds-WP_059530126.1;Parent=gene-LDO45_RS15965;Dbxref=GenBank:WP_059530126.1;Name=WP_059530126.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=guanylate kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486663.1;locus_tag=LDO45_RS15965;product=guanylate kinase;protein_id=WP_059530126.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 131096 131299 . + . ID=gene-LDO45_RS15970;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=LDO45_RS15970;old_locus_tag=BDI4_290144 NZ_CAJZAS010000182.1 Protein Homology CDS 131096 131299 . + 0 ID=cds-WP_006025620.1;Parent=gene-LDO45_RS15970;Dbxref=GenBank:WP_006025620.1;Name=WP_006025620.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008921215.1;locus_tag=LDO45_RS15970;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_006025620.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 131363 133729 . + . ID=gene-LDO45_RS15975;Name=LDO45_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15975;old_locus_tag=BDI4_290145 NZ_CAJZAS010000182.1 Protein Homology CDS 131363 133729 . + 0 ID=cds-WP_223962450.1;Parent=gene-LDO45_RS15975;Dbxref=GenBank:WP_223962450.1;Name=WP_223962450.1;Ontology_term=GO:0015970,GO:0005524,GO:0005525,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194871.1;locus_tag=LDO45_RS15975;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=WP_223962450.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 134077 134640 . + . ID=gene-LDO45_RS15980;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=LDO45_RS15980;old_locus_tag=BDI4_290146 NZ_CAJZAS010000182.1 Protein Homology CDS 134077 134640 . + 0 ID=cds-WP_223962451.1;Parent=gene-LDO45_RS15980;Dbxref=GenBank:WP_223962451.1;Name=WP_223962451.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908889.1;locus_tag=LDO45_RS15980;product=transcription elongation factor GreB;protein_id=WP_223962451.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 134748 135890 . - . ID=gene-LDO45_RS15985;Name=LDO45_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15985;old_locus_tag=BDI4_290147 NZ_CAJZAS010000182.1 Protein Homology CDS 134748 135890 . - 0 ID=cds-WP_223962453.1;Parent=gene-LDO45_RS15985;Dbxref=GenBank:WP_223962453.1;Name=WP_223962453.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194869.1;locus_tag=LDO45_RS15985;product=porin;protein_id=WP_223962453.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 136397 136660 . - . ID=gene-LDO45_RS15990;Name=LDO45_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15990;old_locus_tag=BDI4_290149 NZ_CAJZAS010000182.1 Protein Homology CDS 136397 136660 . - 0 ID=cds-WP_059530114.1;Parent=gene-LDO45_RS15990;Dbxref=GenBank:WP_059530114.1;Name=WP_059530114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400779.1;locus_tag=LDO45_RS15990;product=hypothetical protein;protein_id=WP_059530114.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 137054 137257 . + . ID=gene-LDO45_RS15995;Name=LDO45_RS15995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS15995;old_locus_tag=BDI4_290150 NZ_CAJZAS010000182.1 Protein Homology CDS 137054 137257 . + 0 ID=cds-WP_027783827.1;Parent=gene-LDO45_RS15995;Dbxref=GenBank:WP_027783827.1;Name=WP_027783827.1;Ontology_term=GO:0001072,GO:0003676,GO:0003723,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,nucleic acid binding|0003676||IEA,RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400778.1;locus_tag=LDO45_RS15995;product=cold-shock protein;protein_id=WP_027783827.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 137417 138544 . + . ID=gene-LDO45_RS16000;Name=LDO45_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16000;old_locus_tag=BDI4_290151 NZ_CAJZAS010000182.1 Protein Homology CDS 137417 138544 . + 0 ID=cds-WP_223962455.1;Parent=gene-LDO45_RS16000;Dbxref=GenBank:WP_223962455.1;Name=WP_223962455.1;Ontology_term=GO:0004527;gbkey=CDS;go_function=exonuclease activity|0004527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496574.1;locus_tag=LDO45_RS16000;product=exonuclease domain-containing protein;protein_id=WP_223962455.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 138582 139175 . - . ID=gene-LDO45_RS16005;Name=LDO45_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16005;old_locus_tag=BDI4_290152 NZ_CAJZAS010000182.1 Protein Homology CDS 138582 139175 . - 0 ID=cds-WP_223962457.1;Parent=gene-LDO45_RS16005;Dbxref=GenBank:WP_223962457.1;Name=WP_223962457.1;Ontology_term=GO:0046417;gbkey=CDS;go_process=chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476613.1;locus_tag=LDO45_RS16005;product=chorismate mutase;protein_id=WP_223962457.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 139396 139542 . - . ID=gene-LDO45_RS16010;Name=LDO45_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16010;old_locus_tag=BDI4_290154 NZ_CAJZAS010000182.1 Protein Homology CDS 139396 139542 . - 0 ID=cds-WP_167359231.1;Parent=gene-LDO45_RS16010;Dbxref=GenBank:WP_167359231.1;Name=WP_167359231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010105617.1;locus_tag=LDO45_RS16010;product=hypothetical protein;protein_id=WP_167359231.1;transl_table=11 NZ_CAJZAS010000182.1 RefSeq gene 139740 140129 . + . ID=gene-LDO45_RS16015;Name=LDO45_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16015;old_locus_tag=BDI4_290155 NZ_CAJZAS010000182.1 Protein Homology CDS 139740 140129 . + 0 ID=cds-WP_059530106.1;Parent=gene-LDO45_RS16015;Dbxref=GenBank:WP_059530106.1;Name=WP_059530106.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756196.1;locus_tag=LDO45_RS16015;product=DUF2946 domain-containing protein;protein_id=WP_059530106.1;transl_table=11 ##sequence-region NZ_CAJZAS010000183.1 1 17606 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000183.1 RefSeq region 1 17606 . + . ID=NZ_CAJZAS010000183.1:1..17606;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_3 NZ_CAJZAS010000183.1 RefSeq pseudogene 117 1157 . - . ID=gene-LDO45_RS16020;Name=LDO45_RS16020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS16020;old_locus_tag=BDI4_30001;partial=true;pseudo=true;start_range=.,117 NZ_CAJZAS010000183.1 Protein Homology CDS 117 1157 . - 0 ID=cds-LDO45_RS16020;Parent=gene-LDO45_RS16020;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364780.1;locus_tag=LDO45_RS16020;partial=true;product=YifB family Mg chelatase-like AAA ATPase;pseudo=true;start_range=.,117;transl_table=11 NZ_CAJZAS010000183.1 RefSeq gene 1397 1648 . - . ID=gene-LDO45_RS16025;Name=LDO45_RS16025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16025;old_locus_tag=BDI4_30002 NZ_CAJZAS010000183.1 Protein Homology CDS 1397 1648 . - 0 ID=cds-WP_059526259.1;Parent=gene-LDO45_RS16025;Dbxref=GenBank:WP_059526259.1;Name=WP_059526259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198021.1;locus_tag=LDO45_RS16025;product=accessory factor UbiK family protein;protein_id=WP_059526259.1;transl_table=11 NZ_CAJZAS010000183.1 RefSeq gene 2003 2341 . + . ID=gene-LDO45_RS16030;Name=LDO45_RS16030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16030;old_locus_tag=BDI4_30003 NZ_CAJZAS010000183.1 Protein Homology CDS 2003 2341 . + 0 ID=cds-WP_006398175.1;Parent=gene-LDO45_RS16030;Dbxref=GenBank:WP_006398175.1;Name=WP_006398175.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018436703.1;locus_tag=LDO45_RS16030;product=P-II family nitrogen regulator;protein_id=WP_006398175.1;transl_table=11 NZ_CAJZAS010000183.1 RefSeq gene 2375 3892 . + . ID=gene-LDO45_RS16035;Name=LDO45_RS16035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16035;old_locus_tag=BDI4_30004 NZ_CAJZAS010000183.1 Protein Homology CDS 2375 3892 . + 0 ID=cds-WP_059526256.1;Parent=gene-LDO45_RS16035;Dbxref=GenBank:WP_059526256.1;Name=WP_059526256.1;Ontology_term=GO:0072488,GO:0008519,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212654.1;locus_tag=LDO45_RS16035;product=ammonium transporter;protein_id=WP_059526256.1;transl_table=11 NZ_CAJZAS010000183.1 RefSeq gene 4135 5424 . + . ID=gene-LDO45_RS16040;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=LDO45_RS16040;old_locus_tag=BDI4_30005 NZ_CAJZAS010000183.1 Protein Homology CDS 4135 5424 . + 0 ID=cds-WP_059526253.1;Parent=gene-LDO45_RS16040;Dbxref=GenBank:WP_059526253.1;Name=WP_059526253.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013337902.1;locus_tag=LDO45_RS16040;product=glutamate--cysteine ligase;protein_id=WP_059526253.1;transl_table=11 NZ_CAJZAS010000183.1 RefSeq gene 5450 6406 . + . ID=gene-LDO45_RS16045;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=LDO45_RS16045;old_locus_tag=BDI4_30006 NZ_CAJZAS010000183.1 Protein Homology CDS 5450 6406 . + 0 ID=cds-WP_059526250.1;Parent=gene-LDO45_RS16045;Dbxref=GenBank:WP_059526250.1;Name=WP_059526250.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090583.1;locus_tag=LDO45_RS16045;product=glutathione synthase;protein_id=WP_059526250.1;transl_table=11 NZ_CAJZAS010000183.1 RefSeq gene 6638 7108 . + . ID=gene-LDO45_RS16050;Name=LDO45_RS16050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16050;old_locus_tag=BDI4_30007 NZ_CAJZAS010000183.1 Protein Homology CDS 6638 7108 . + 0 ID=cds-WP_059526247.1;Parent=gene-LDO45_RS16050;Dbxref=GenBank:WP_059526247.1;Name=WP_059526247.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198014.1;locus_tag=LDO45_RS16050;product=PTS sugar transporter subunit IIA;protein_id=WP_059526247.1;transl_table=11 NZ_CAJZAS010000183.1 RefSeq gene 7183 7452 . + . ID=gene-LDO45_RS16055;Name=LDO45_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16055;old_locus_tag=BDI4_30008 NZ_CAJZAS010000183.1 Protein Homology CDS 7183 7452 . + 0 ID=cds-WP_006477716.1;Parent=gene-LDO45_RS16055;Dbxref=GenBank:WP_006477716.1;Name=WP_006477716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010101417.1;locus_tag=LDO45_RS16055;product=HPr family phosphocarrier protein;protein_id=WP_006477716.1;transl_table=11 NZ_CAJZAS010000183.1 RefSeq gene 7654 9426 . + . ID=gene-LDO45_RS16060;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=LDO45_RS16060;old_locus_tag=BDI4_30009 NZ_CAJZAS010000183.1 Protein Homology CDS 7654 9426 . + 0 ID=cds-WP_059526298.1;Parent=gene-LDO45_RS16060;Dbxref=GenBank:WP_059526298.1;Name=WP_059526298.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407042.1;locus_tag=LDO45_RS16060;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_059526298.1;transl_table=11 NZ_CAJZAS010000183.1 RefSeq gene 9510 10262 . - . ID=gene-LDO45_RS16065;Name=LDO45_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16065;old_locus_tag=BDI4_30010 NZ_CAJZAS010000183.1 Protein Homology CDS 9510 10262 . - 0 ID=cds-WP_059526244.1;Parent=gene-LDO45_RS16065;Dbxref=GenBank:WP_059526244.1;Name=WP_059526244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329276.1;locus_tag=LDO45_RS16065;product=HesA/MoeB/ThiF family protein;protein_id=WP_059526244.1;transl_table=11 NZ_CAJZAS010000183.1 RefSeq gene 10375 11916 . - . ID=gene-LDO45_RS16070;Name=LDO45_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16070;old_locus_tag=BDI4_30011 NZ_CAJZAS010000183.1 Protein Homology CDS 10375 11916 . - 0 ID=cds-WP_059526241.1;Parent=gene-LDO45_RS16070;Dbxref=GenBank:WP_059526241.1;Name=WP_059526241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398184.1;locus_tag=LDO45_RS16070;product=S41 family peptidase;protein_id=WP_059526241.1;transl_table=11 NZ_CAJZAS010000183.1 RefSeq gene 12167 12913 . - . ID=gene-LDO45_RS16075;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=LDO45_RS16075;old_locus_tag=BDI4_30012 NZ_CAJZAS010000183.1 Protein Homology CDS 12167 12913 . - 0 ID=cds-WP_223962468.1;Parent=gene-LDO45_RS16075;Dbxref=GenBank:WP_223962468.1;Name=WP_223962468.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658011.1;locus_tag=LDO45_RS16075;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_223962468.1;transl_table=11 NZ_CAJZAS010000183.1 RefSeq gene 13050 13472 . + . ID=gene-LDO45_RS16080;Name=LDO45_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16080;old_locus_tag=BDI4_30013 NZ_CAJZAS010000183.1 Protein Homology CDS 13050 13472 . + 0 ID=cds-WP_059526234.1;Parent=gene-LDO45_RS16080;Dbxref=GenBank:WP_059526234.1;Name=WP_059526234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723700.1;locus_tag=LDO45_RS16080;product=rhodanese-like domain-containing protein;protein_id=WP_059526234.1;transl_table=11 NZ_CAJZAS010000183.1 RefSeq gene 13469 13729 . + . ID=gene-LDO45_RS16085;Name=grxC;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=LDO45_RS16085;old_locus_tag=BDI4_30014 NZ_CAJZAS010000183.1 Protein Homology CDS 13469 13729 . + 0 ID=cds-WP_006752069.1;Parent=gene-LDO45_RS16085;Dbxref=GenBank:WP_006752069.1;Name=WP_006752069.1;Ontology_term=GO:0045454;gbkey=CDS;gene=grxC;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004200200.1;locus_tag=LDO45_RS16085;product=glutaredoxin 3;protein_id=WP_006752069.1;transl_table=11 NZ_CAJZAS010000183.1 RefSeq gene 13837 14319 . + . ID=gene-LDO45_RS16090;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=LDO45_RS16090;old_locus_tag=BDI4_30015 NZ_CAJZAS010000183.1 Protein Homology CDS 13837 14319 . + 0 ID=cds-WP_014895954.1;Parent=gene-LDO45_RS16090;Dbxref=GenBank:WP_014895954.1;Name=WP_014895954.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658008.1;locus_tag=LDO45_RS16090;product=protein-export chaperone SecB;protein_id=WP_014895954.1;transl_table=11 NZ_CAJZAS010000183.1 RefSeq gene 14346 15344 . + . ID=gene-LDO45_RS16095;Name=LDO45_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16095;old_locus_tag=BDI4_30016 NZ_CAJZAS010000183.1 Protein Homology CDS 14346 15344 . + 0 ID=cds-WP_059526231.1;Parent=gene-LDO45_RS16095;Dbxref=GenBank:WP_059526231.1;Name=WP_059526231.1;Ontology_term=GO:0046167,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate biosynthetic process|0046167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546282.1;locus_tag=LDO45_RS16095;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_059526231.1;transl_table=11 NZ_CAJZAS010000183.1 RefSeq gene 15450 15974 . + . ID=gene-LDO45_RS16100;Name=LDO45_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16100;old_locus_tag=BDI4_30017 NZ_CAJZAS010000183.1 Protein Homology CDS 15450 15974 . + 0 ID=cds-WP_223962470.1;Parent=gene-LDO45_RS16100;Dbxref=GenBank:WP_223962470.1;Name=WP_223962470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353283.1;locus_tag=LDO45_RS16100;product=O-acetyl-ADP-ribose deacetylase;protein_id=WP_223962470.1;transl_table=11 NZ_CAJZAS010000183.1 RefSeq gene 16020 16490 . - . ID=gene-LDO45_RS16105;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=LDO45_RS16105;old_locus_tag=BDI4_30018 NZ_CAJZAS010000183.1 Protein Homology CDS 16020 16490 . - 0 ID=cds-WP_059691434.1;Parent=gene-LDO45_RS16105;Dbxref=GenBank:WP_059691434.1;Name=WP_059691434.1;Ontology_term=GO:0006400,GO:0008175;gbkey=CDS;gene=trmL;go_function=tRNA methyltransferase activity|0008175||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763321.1;locus_tag=LDO45_RS16105;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_059691434.1;transl_table=11 NZ_CAJZAS010000183.1 RefSeq gene 16598 17311 . - . ID=gene-LDO45_RS16110;Name=LDO45_RS16110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16110 NZ_CAJZAS010000183.1 Protein Homology CDS 16598 17311 . - 0 ID=cds-WP_223962472.1;Parent=gene-LDO45_RS16110;Dbxref=GenBank:WP_223962472.1;Name=WP_223962472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895958.1;locus_tag=LDO45_RS16110;product=ComF family protein;protein_id=WP_223962472.1;transl_table=11 NZ_CAJZAS010000183.1 RefSeq pseudogene 17395 17606 . + . ID=gene-LDO45_RS16115;Name=LDO45_RS16115;end_range=17606,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS16115;partial=true;pseudo=true NZ_CAJZAS010000183.1 Protein Homology CDS 17395 17606 . + 0 ID=cds-LDO45_RS16115;Parent=gene-LDO45_RS16115;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=17606,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762484.1;locus_tag=LDO45_RS16115;partial=true;product=SAM-dependent methyltransferase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000184.1 1 120934 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000184.1 RefSeq region 1 120934 . + . ID=NZ_CAJZAS010000184.1:1..120934;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_30 NZ_CAJZAS010000184.1 RefSeq pseudogene 1 384 . + . ID=gene-LDO45_RS16120;Name=LDO45_RS16120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS16120;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000184.1 Protein Homology CDS 1 384 . + 0 ID=cds-LDO45_RS16120;Parent=gene-LDO45_RS16120;Note=Involved in the electron transport chain%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405622.1;locus_tag=LDO45_RS16120;partial=true;product=electron transport complex subunit RsxB;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 381 1025 . + . ID=gene-LDO45_RS16125;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=LDO45_RS16125;old_locus_tag=BDI4_300002 NZ_CAJZAS010000184.1 Protein Homology CDS 381 1025 . + 0 ID=cds-WP_006754450.1;Parent=gene-LDO45_RS16125;Dbxref=GenBank:WP_006754450.1;Name=WP_006754450.1;Ontology_term=GO:0006281,GO:0140078;gbkey=CDS;gene=nth;go_function=class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896425.1;locus_tag=LDO45_RS16125;product=endonuclease III;protein_id=WP_006754450.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 1128 2021 . - . ID=gene-LDO45_RS16130;Name=LDO45_RS16130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16130;old_locus_tag=BDI4_300003 NZ_CAJZAS010000184.1 Protein Homology CDS 1128 2021 . - 0 ID=cds-WP_223962474.1;Parent=gene-LDO45_RS16130;Dbxref=GenBank:WP_223962474.1;Name=WP_223962474.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545870.1;locus_tag=LDO45_RS16130;product=DMT family transporter;protein_id=WP_223962474.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 2224 2691 . + . ID=gene-LDO45_RS16135;Name=LDO45_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16135;old_locus_tag=BDI4_300004 NZ_CAJZAS010000184.1 Protein Homology CDS 2224 2691 . + 0 ID=cds-WP_373557189.1;Parent=gene-LDO45_RS16135;Dbxref=GenBank:WP_373557189.1;Name=WP_373557189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545871.1;locus_tag=LDO45_RS16135;product=DUF1841 family protein;protein_id=WP_373557189.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 2764 3123 . - . ID=gene-LDO45_RS16140;Name=LDO45_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16140;old_locus_tag=BDI4_300005 NZ_CAJZAS010000184.1 Protein Homology CDS 2764 3123 . - 0 ID=cds-WP_223962476.1;Parent=gene-LDO45_RS16140;Dbxref=GenBank:WP_223962476.1;Name=WP_223962476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761210.1;locus_tag=LDO45_RS16140;product=cytochrome c;protein_id=WP_223962476.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 3164 3523 . - . ID=gene-LDO45_RS16145;Name=LDO45_RS16145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16145;old_locus_tag=BDI4_300006 NZ_CAJZAS010000184.1 Protein Homology CDS 3164 3523 . - 0 ID=cds-WP_011885616.1;Parent=gene-LDO45_RS16145;Dbxref=GenBank:WP_011885616.1;Name=WP_011885616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601686.1;locus_tag=LDO45_RS16145;product=cytochrome c;protein_id=WP_011885616.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 3768 4610 . + . ID=gene-LDO45_RS16150;Name=LDO45_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16150;old_locus_tag=BDI4_300008 NZ_CAJZAS010000184.1 Protein Homology CDS 3768 4610 . + 0 ID=cds-WP_059527339.1;Parent=gene-LDO45_RS16150;Dbxref=GenBank:WP_059527339.1;Name=WP_059527339.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186676.1;locus_tag=LDO45_RS16150;product=MoxR family ATPase;protein_id=WP_059527339.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 4632 5807 . + . ID=gene-LDO45_RS16155;Name=LDO45_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16155;old_locus_tag=BDI4_300009 NZ_CAJZAS010000184.1 Protein Homology CDS 4632 5807 . + 0 ID=cds-WP_223962478.1;Parent=gene-LDO45_RS16155;Dbxref=GenBank:WP_223962478.1;Name=WP_223962478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186167.1;locus_tag=LDO45_RS16155;product=VWA domain-containing protein;protein_id=WP_223962478.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 5864 7075 . + . ID=gene-LDO45_RS16160;Name=LDO45_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16160;old_locus_tag=BDI4_300010 NZ_CAJZAS010000184.1 Protein Homology CDS 5864 7075 . + 0 ID=cds-WP_059689423.1;Parent=gene-LDO45_RS16160;Dbxref=GenBank:WP_059689423.1;Name=WP_059689423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896419.1;locus_tag=LDO45_RS16160;product=benzoate/H(+) symporter BenE family transporter;protein_id=WP_059689423.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 7244 8197 . + . ID=gene-LDO45_RS16165;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=LDO45_RS16165;old_locus_tag=BDI4_300011 NZ_CAJZAS010000184.1 Protein Homology CDS 7244 8197 . + 0 ID=cds-WP_059527350.1;Parent=gene-LDO45_RS16165;Dbxref=GenBank:WP_059527350.1;Name=WP_059527350.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012432264.1;locus_tag=LDO45_RS16165;product=transaldolase;protein_id=WP_059527350.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 8444 8896 . + . ID=gene-LDO45_RS16170;Name=LDO45_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16170;old_locus_tag=BDI4_300012 NZ_CAJZAS010000184.1 Protein Homology CDS 8444 8896 . + 0 ID=cds-WP_059527353.1;Parent=gene-LDO45_RS16170;Dbxref=GenBank:WP_059527353.1;Name=WP_059527353.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352798.1;locus_tag=LDO45_RS16170;product=VOC family protein;protein_id=WP_059527353.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 8950 9462 . - . ID=gene-LDO45_RS16175;Name=LDO45_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16175;old_locus_tag=BDI4_300013 NZ_CAJZAS010000184.1 GeneMarkS-2+ CDS 8950 9462 . - 0 ID=cds-WP_156437357.1;Parent=gene-LDO45_RS16175;Dbxref=GenBank:WP_156437357.1;Name=WP_156437357.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS16175;product=hypothetical protein;protein_id=WP_156437357.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 9893 11443 . - . ID=gene-LDO45_RS16180;Name=mctP;gbkey=Gene;gene=mctP;gene_biotype=protein_coding;locus_tag=LDO45_RS16180;old_locus_tag=BDI4_300015 NZ_CAJZAS010000184.1 Protein Homology CDS 9893 11443 . - 0 ID=cds-WP_223962480.1;Parent=gene-LDO45_RS16180;Dbxref=GenBank:WP_223962480.1;Name=WP_223962480.1;Ontology_term=GO:0006848,GO:0015293;gbkey=CDS;gene=mctP;go_function=symporter activity|0015293||IEA;go_process=pyruvate transport|0006848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328952.1;locus_tag=LDO45_RS16180;product=monocarboxylate uptake permease MctP;protein_id=WP_223962480.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 11440 11682 . - . ID=gene-LDO45_RS16185;Name=LDO45_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16185;old_locus_tag=BDI4_300016 NZ_CAJZAS010000184.1 Protein Homology CDS 11440 11682 . - 0 ID=cds-WP_011352801.1;Parent=gene-LDO45_RS16185;Dbxref=GenBank:WP_011352801.1;Name=WP_011352801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102349.1;locus_tag=LDO45_RS16185;product=DUF3311 domain-containing protein;protein_id=WP_011352801.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 11882 12799 . - . ID=gene-LDO45_RS16190;Name=LDO45_RS16190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16190;old_locus_tag=BDI4_300017 NZ_CAJZAS010000184.1 Protein Homology CDS 11882 12799 . - 0 ID=cds-WP_059527361.1;Parent=gene-LDO45_RS16190;Dbxref=GenBank:WP_059527361.1;Name=WP_059527361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352802.1;locus_tag=LDO45_RS16190;product=hypothetical protein;protein_id=WP_059527361.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 12937 13191 . + . ID=gene-LDO45_RS16195;Name=LDO45_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16195;old_locus_tag=BDI4_300018 NZ_CAJZAS010000184.1 Protein Homology CDS 12937 13191 . + 0 ID=cds-WP_059689428.1;Parent=gene-LDO45_RS16195;Dbxref=GenBank:WP_059689428.1;Name=WP_059689428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364382.1;locus_tag=LDO45_RS16195;product=hypothetical protein;protein_id=WP_059689428.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 13229 13705 . - . ID=gene-LDO45_RS16200;Name=LDO45_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16200;old_locus_tag=BDI4_300019 NZ_CAJZAS010000184.1 Protein Homology CDS 13229 13705 . - 0 ID=cds-WP_059527367.1;Parent=gene-LDO45_RS16200;Dbxref=GenBank:WP_059527367.1;Name=WP_059527367.1;Ontology_term=GO:0006285,GO:0033958;gbkey=CDS;go_function=DNA-deoxyinosine glycosylase activity|0033958||IEA;go_process=base-excision repair%2C AP site formation|0006285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328956.1;locus_tag=LDO45_RS16200;product=DNA-deoxyinosine glycosylase;protein_id=WP_059527367.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 13705 14301 . - . ID=gene-LDO45_RS16205;Name=LDO45_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16205;old_locus_tag=BDI4_300020 NZ_CAJZAS010000184.1 Protein Homology CDS 13705 14301 . - 0 ID=cds-WP_223962482.1;Parent=gene-LDO45_RS16205;Dbxref=GenBank:WP_223962482.1;Name=WP_223962482.1;Ontology_term=GO:0006744,GO:0008813,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=chorismate lyase activity|0008813||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328957.1;locus_tag=LDO45_RS16205;product=chorismate lyase;protein_id=WP_223962482.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 14310 16208 . - . ID=gene-LDO45_RS16210;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=LDO45_RS16210;old_locus_tag=BDI4_300021 NZ_CAJZAS010000184.1 Protein Homology CDS 14310 16208 . - 0 ID=cds-WP_223962484.1;Parent=gene-LDO45_RS16210;Dbxref=GenBank:WP_223962484.1;Name=WP_223962484.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102343.1;locus_tag=LDO45_RS16210;product=molecular chaperone HtpG;protein_id=WP_223962484.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 16356 16928 . + . ID=gene-LDO45_RS16215;Name=LDO45_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16215 NZ_CAJZAS010000184.1 Protein Homology CDS 16356 16928 . + 0 ID=cds-WP_308051230.1;Parent=gene-LDO45_RS16215;Dbxref=GenBank:WP_308051230.1;Name=WP_308051230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762940.1;locus_tag=LDO45_RS16215;product=DUF2778 domain-containing protein;protein_id=WP_308051230.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 17255 18715 . - . ID=gene-LDO45_RS16220;Name=LDO45_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16220;old_locus_tag=BDI4_300025 NZ_CAJZAS010000184.1 Protein Homology CDS 17255 18715 . - 0 ID=cds-WP_059703499.1;Parent=gene-LDO45_RS16220;Dbxref=GenBank:WP_059703499.1;Name=WP_059703499.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004533687.1;locus_tag=LDO45_RS16220;product=PLP-dependent aminotransferase family protein;protein_id=WP_059703499.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 18946 19638 . + . ID=gene-LDO45_RS16225;Name=LDO45_RS16225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16225;old_locus_tag=BDI4_300027 NZ_CAJZAS010000184.1 Protein Homology CDS 18946 19638 . + 0 ID=cds-WP_223962486.1;Parent=gene-LDO45_RS16225;Dbxref=GenBank:WP_223962486.1;Name=WP_223962486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494064.1;locus_tag=LDO45_RS16225;product=VOC family protein;protein_id=WP_223962486.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 19694 20602 . + . ID=gene-LDO45_RS16230;Name=LDO45_RS16230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16230;old_locus_tag=BDI4_300028 NZ_CAJZAS010000184.1 Protein Homology CDS 19694 20602 . + 0 ID=cds-WP_006752871.1;Parent=gene-LDO45_RS16230;Dbxref=GenBank:WP_006752871.1;Name=WP_006752871.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896405.1;locus_tag=LDO45_RS16230;product=DMT family transporter;protein_id=WP_006752871.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 20755 21936 . + . ID=gene-LDO45_RS16235;Name=LDO45_RS16235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16235;old_locus_tag=BDI4_300029 NZ_CAJZAS010000184.1 Protein Homology CDS 20755 21936 . + 0 ID=cds-WP_059600352.1;Parent=gene-LDO45_RS16235;Dbxref=GenBank:WP_059600352.1;Name=WP_059600352.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522482.1;locus_tag=LDO45_RS16235;product=PLP-dependent aminotransferase family protein;protein_id=WP_059600352.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 21979 22437 . + . ID=gene-LDO45_RS16240;Name=LDO45_RS16240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16240;old_locus_tag=BDI4_300030 NZ_CAJZAS010000184.1 Protein Homology CDS 21979 22437 . + 0 ID=cds-WP_006478174.1;Parent=gene-LDO45_RS16240;Dbxref=GenBank:WP_006478174.1;Name=WP_006478174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398680.1;locus_tag=LDO45_RS16240;product=RidA family protein;protein_id=WP_006478174.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 22451 23332 . + . ID=gene-LDO45_RS16245;Name=LDO45_RS16245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16245;old_locus_tag=BDI4_300031 NZ_CAJZAS010000184.1 Protein Homology CDS 22451 23332 . + 0 ID=cds-WP_223962488.1;Parent=gene-LDO45_RS16245;Dbxref=GenBank:WP_223962488.1;Name=WP_223962488.1;Ontology_term=GO:0009058,GO:0016853,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isomerase activity|0016853||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212951.1;locus_tag=LDO45_RS16245;product=PhzF family phenazine biosynthesis protein;protein_id=WP_223962488.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 23556 25895 . + . ID=gene-LDO45_RS16250;Name=LDO45_RS16250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16250;old_locus_tag=BDI4_300032 NZ_CAJZAS010000184.1 Protein Homology CDS 23556 25895 . + 0 ID=cds-WP_223962490.1;Parent=gene-LDO45_RS16250;Dbxref=GenBank:WP_223962490.1;Name=WP_223962490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758136.1;locus_tag=LDO45_RS16250;product=EAL domain-containing protein;protein_id=WP_223962490.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 26092 27306 . + . ID=gene-LDO45_RS16255;Name=LDO45_RS16255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16255;old_locus_tag=BDI4_300033 NZ_CAJZAS010000184.1 Protein Homology CDS 26092 27306 . + 0 ID=cds-WP_059527389.1;Parent=gene-LDO45_RS16255;Dbxref=GenBank:WP_059527389.1;Name=WP_059527389.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657569.1;locus_tag=LDO45_RS16255;product=chromate transporter;protein_id=WP_059527389.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 27343 27789 . - . ID=gene-LDO45_RS16260;Name=LDO45_RS16260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16260;old_locus_tag=BDI4_300034 NZ_CAJZAS010000184.1 Protein Homology CDS 27343 27789 . - 0 ID=cds-WP_223962492.1;Parent=gene-LDO45_RS16260;Dbxref=GenBank:WP_223962492.1;Name=WP_223962492.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352815.1;locus_tag=LDO45_RS16260;product=multidrug/biocide efflux PACE transporter;protein_id=WP_223962492.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 27902 28786 . + . ID=gene-LDO45_RS16265;Name=LDO45_RS16265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16265;old_locus_tag=BDI4_300035 NZ_CAJZAS010000184.1 Protein Homology CDS 27902 28786 . + 0 ID=cds-WP_059527394.1;Parent=gene-LDO45_RS16265;Dbxref=GenBank:WP_059527394.1;Name=WP_059527394.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185890.1;locus_tag=LDO45_RS16265;product=LysR family transcriptional regulator;protein_id=WP_059527394.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 28849 29307 . - . ID=gene-LDO45_RS16270;Name=LDO45_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16270;old_locus_tag=BDI4_300036 NZ_CAJZAS010000184.1 Protein Homology CDS 28849 29307 . - 0 ID=cds-WP_059448642.1;Parent=gene-LDO45_RS16270;Dbxref=GenBank:WP_059448642.1;Name=WP_059448642.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413474.1;locus_tag=LDO45_RS16270;product=CopD family protein;protein_id=WP_059448642.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 29555 31876 . - . ID=gene-LDO45_RS16275;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=LDO45_RS16275;old_locus_tag=BDI4_300037 NZ_CAJZAS010000184.1 Protein Homology CDS 29555 31876 . - 0 ID=cds-WP_059527396.1;Parent=gene-LDO45_RS16275;Dbxref=GenBank:WP_059527396.1;Name=WP_059527396.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892382.1;locus_tag=LDO45_RS16275;product=DNA topoisomerase IV subunit A;protein_id=WP_059527396.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 31939 33921 . - . ID=gene-LDO45_RS16280;Name=LDO45_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16280;old_locus_tag=BDI4_300038 NZ_CAJZAS010000184.1 Protein Homology CDS 31939 33921 . - 0 ID=cds-WP_059527399.1;Parent=gene-LDO45_RS16280;Dbxref=GenBank:WP_059527399.1;Name=WP_059527399.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254672.1;locus_tag=LDO45_RS16280;product=DNA topoisomerase IV subunit B;protein_id=WP_059527399.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 34145 36130 . - . ID=gene-LDO45_RS16285;Name=LDO45_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16285;old_locus_tag=BDI4_300039 NZ_CAJZAS010000184.1 Protein Homology CDS 34145 36130 . - 0 ID=cds-WP_179949124.1;Parent=gene-LDO45_RS16285;Dbxref=GenBank:WP_179949124.1;Name=WP_179949124.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478166.1;locus_tag=LDO45_RS16285;product=ATP-binding cassette domain-containing protein;protein_id=WP_179949124.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 36324 36728 . - . ID=gene-LDO45_RS16290;Name=LDO45_RS16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16290;old_locus_tag=BDI4_300040 NZ_CAJZAS010000184.1 Protein Homology CDS 36324 36728 . - 0 ID=cds-WP_059528288.1;Parent=gene-LDO45_RS16290;Dbxref=GenBank:WP_059528288.1;Name=WP_059528288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328968.1;locus_tag=LDO45_RS16290;product=DUF4399 domain-containing protein;protein_id=WP_059528288.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 36926 37108 . + . ID=gene-LDO45_RS16295;Name=LDO45_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16295;old_locus_tag=BDI4_300041 NZ_CAJZAS010000184.1 Protein Homology CDS 36926 37108 . + 0 ID=cds-WP_006478164.1;Parent=gene-LDO45_RS16295;Dbxref=GenBank:WP_006478164.1;Name=WP_006478164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186320.1;locus_tag=LDO45_RS16295;product=rubredoxin;protein_id=WP_006478164.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 37256 37330 . + . ID=gene-LDO45_RS16300;Name=LDO45_RS16300;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS16300;old_locus_tag=BDI4_TRNA10 NZ_CAJZAS010000184.1 tRNAscan-SE tRNA 37256 37330 . + . ID=rna-LDO45_RS16300;Parent=gene-LDO45_RS16300;anticodon=(pos:37289..37291);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS16300;product=tRNA-Arg NZ_CAJZAS010000184.1 tRNAscan-SE exon 37256 37330 . + . ID=exon-LDO45_RS16300-1;Parent=rna-LDO45_RS16300;anticodon=(pos:37289..37291);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS16300;product=tRNA-Arg NZ_CAJZAS010000184.1 RefSeq gene 37506 38723 . + . ID=gene-LDO45_RS16305;Name=LDO45_RS16305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16305;old_locus_tag=BDI4_300042 NZ_CAJZAS010000184.1 Protein Homology CDS 37506 38723 . + 0 ID=cds-WP_223962493.1;Parent=gene-LDO45_RS16305;Dbxref=GenBank:WP_223962493.1;Name=WP_223962493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254676.1;locus_tag=LDO45_RS16305;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_223962493.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 38845 39495 . + . ID=gene-LDO45_RS16310;Name=LDO45_RS16310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16310;old_locus_tag=BDI4_300043 NZ_CAJZAS010000184.1 GeneMarkS-2+ CDS 38845 39495 . + 0 ID=cds-WP_223962495.1;Parent=gene-LDO45_RS16310;Dbxref=GenBank:WP_223962495.1;Name=WP_223962495.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS16310;product=hypothetical protein;protein_id=WP_223962495.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 39609 39869 . + . ID=gene-LDO45_RS16315;Name=LDO45_RS16315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16315;old_locus_tag=BDI4_300044 NZ_CAJZAS010000184.1 Protein Homology CDS 39609 39869 . + 0 ID=cds-WP_223962497.1;Parent=gene-LDO45_RS16315;Dbxref=GenBank:WP_223962497.1;Name=WP_223962497.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486977.1;locus_tag=LDO45_RS16315;product=AlpA family transcriptional regulator;protein_id=WP_223962497.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 39888 40238 . + . ID=gene-LDO45_RS16320;Name=LDO45_RS16320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16320;old_locus_tag=BDI4_300045 NZ_CAJZAS010000184.1 Protein Homology CDS 39888 40238 . + 0 ID=cds-WP_223962499.1;Parent=gene-LDO45_RS16320;Dbxref=GenBank:WP_223962499.1;Name=WP_223962499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254678.1;locus_tag=LDO45_RS16320;product=hypothetical protein;protein_id=WP_223962499.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 40389 40661 . + . ID=gene-LDO45_RS16325;Name=LDO45_RS16325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16325;old_locus_tag=BDI4_300046 NZ_CAJZAS010000184.1 Protein Homology CDS 40389 40661 . + 0 ID=cds-WP_308051231.1;Parent=gene-LDO45_RS16325;Dbxref=GenBank:WP_308051231.1;Name=WP_308051231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009917286.1;locus_tag=LDO45_RS16325;product=XRE family transcriptional regulator;protein_id=WP_308051231.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 40738 40884 . + . ID=gene-LDO45_RS16330;Name=LDO45_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16330;old_locus_tag=BDI4_300047 NZ_CAJZAS010000184.1 Protein Homology CDS 40738 40884 . + 0 ID=cds-WP_175907916.1;Parent=gene-LDO45_RS16330;Dbxref=GenBank:WP_175907916.1;Name=WP_175907916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016344530.1;locus_tag=LDO45_RS16330;product=hypothetical protein;protein_id=WP_175907916.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 40877 41053 . + . ID=gene-LDO45_RS16335;Name=LDO45_RS16335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16335;old_locus_tag=BDI4_300048 NZ_CAJZAS010000184.1 Protein Homology CDS 40877 41053 . + 0 ID=cds-WP_223962501.1;Parent=gene-LDO45_RS16335;Dbxref=GenBank:WP_223962501.1;Name=WP_223962501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254682.1;locus_tag=LDO45_RS16335;product=hypothetical protein;protein_id=WP_223962501.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 40990 41634 . + . ID=gene-LDO45_RS16340;Name=LDO45_RS16340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16340;old_locus_tag=BDI4_300049 NZ_CAJZAS010000184.1 Protein Homology CDS 40990 41634 . + 0 ID=cds-WP_223962503.1;Parent=gene-LDO45_RS16340;Dbxref=GenBank:WP_223962503.1;Name=WP_223962503.1;Ontology_term=GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: protein motif:HMM:NF042863.3;locus_tag=LDO45_RS16340;product=terminase TerL endonuclease subunit;protein_id=WP_223962503.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 41691 42968 . + . ID=gene-LDO45_RS16345;Name=LDO45_RS16345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16345;old_locus_tag=BDI4_300050 NZ_CAJZAS010000184.1 Protein Homology CDS 41691 42968 . + 0 ID=cds-WP_223962505.1;Parent=gene-LDO45_RS16345;Dbxref=GenBank:WP_223962505.1;Name=WP_223962505.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254690.1;locus_tag=LDO45_RS16345;product=phage major capsid protein;protein_id=WP_223962505.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 42981 43160 . + . ID=gene-LDO45_RS16350;Name=LDO45_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16350;old_locus_tag=BDI4_300051 NZ_CAJZAS010000184.1 Protein Homology CDS 42981 43160 . + 0 ID=cds-WP_060272903.1;Parent=gene-LDO45_RS16350;Dbxref=GenBank:WP_060272903.1;Name=WP_060272903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009936858.1;locus_tag=LDO45_RS16350;product=hypothetical protein;protein_id=WP_060272903.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 43160 44446 . + . ID=gene-LDO45_RS16355;Name=LDO45_RS16355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16355;old_locus_tag=BDI4_300052 NZ_CAJZAS010000184.1 Protein Homology CDS 43160 44446 . + 0 ID=cds-WP_223962507.1;Parent=gene-LDO45_RS16355;Dbxref=GenBank:WP_223962507.1;Name=WP_223962507.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011204954.1;locus_tag=LDO45_RS16355;product=phage portal protein;protein_id=WP_223962507.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 44436 44753 . + . ID=gene-LDO45_RS16360;Name=LDO45_RS16360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16360;old_locus_tag=BDI4_300053 NZ_CAJZAS010000184.1 Protein Homology CDS 44436 44753 . + 0 ID=cds-WP_223962509.1;Parent=gene-LDO45_RS16360;Dbxref=GenBank:WP_223962509.1;Name=WP_223962509.1;Ontology_term=GO:0016032;gbkey=CDS;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906951.1;locus_tag=LDO45_RS16360;product=head-tail connector protein;protein_id=WP_223962509.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 45155 46897 . + . ID=gene-LDO45_RS16365;Name=LDO45_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16365;old_locus_tag=BDI4_300054 NZ_CAJZAS010000184.1 Protein Homology CDS 45155 46897 . + 0 ID=cds-WP_223962511.1;Parent=gene-LDO45_RS16365;Dbxref=GenBank:WP_223962511.1;Name=WP_223962511.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016488.5;locus_tag=LDO45_RS16365;product=RelA/SpoT domain-containing protein;protein_id=WP_223962511.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 47827 49068 . - . ID=gene-LDO45_RS16370;Name=LDO45_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16370;old_locus_tag=BDI4_300056 NZ_CAJZAS010000184.1 Protein Homology CDS 47827 49068 . - 0 ID=cds-WP_223962513.1;Parent=gene-LDO45_RS16370;Dbxref=GenBank:WP_223962513.1;Name=WP_223962513.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024589.5;locus_tag=LDO45_RS16370;product=AAA family ATPase;protein_id=WP_223962513.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 49722 49883 . + . ID=gene-LDO45_RS16375;Name=LDO45_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16375 NZ_CAJZAS010000184.1 GeneMarkS-2+ CDS 49722 49883 . + 0 ID=cds-WP_223962514.1;Parent=gene-LDO45_RS16375;Dbxref=GenBank:WP_223962514.1;Name=WP_223962514.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS16375;product=hypothetical protein;protein_id=WP_223962514.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq pseudogene 49997 50150 . - . ID=gene-LDO45_RS16380;Name=LDO45_RS16380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS16380;partial=true;pseudo=true;start_range=.,49997 NZ_CAJZAS010000184.1 Protein Homology CDS 49997 50150 . - 0 ID=cds-LDO45_RS16380;Parent=gene-LDO45_RS16380;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494308.1;locus_tag=LDO45_RS16380;partial=true;product=aspartate aminotransferase family protein;pseudo=true;start_range=.,49997;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 50162 51328 . - . ID=gene-LDO45_RS16385;Name=LDO45_RS16385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16385;old_locus_tag=BDI4_300062 NZ_CAJZAS010000184.1 Protein Homology CDS 50162 51328 . - 0 ID=cds-WP_223962516.1;Parent=gene-LDO45_RS16385;Dbxref=GenBank:WP_223962516.1;Name=WP_223962516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485017.1;locus_tag=LDO45_RS16385;product=CfaE/CblD family pilus tip adhesin;protein_id=WP_223962516.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 51404 53872 . - . ID=gene-LDO45_RS16390;Name=cblC;gbkey=Gene;gene=cblC;gene_biotype=protein_coding;locus_tag=LDO45_RS16390;old_locus_tag=BDI4_300063 NZ_CAJZAS010000184.1 Protein Homology CDS 51404 53872 . - 0 ID=cds-WP_290371020.1;Parent=gene-LDO45_RS16390;Dbxref=GenBank:WP_290371020.1;Name=WP_290371020.1;gbkey=CDS;gene=cblC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485012.1;locus_tag=LDO45_RS16390;product=cable pilus usher protein CblC;protein_id=WP_290371020.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 54192 54692 . - . ID=gene-LDO45_RS16395;Name=cblA;gbkey=Gene;gene=cblA;gene_biotype=protein_coding;locus_tag=LDO45_RS16395;old_locus_tag=BDI4_300064 NZ_CAJZAS010000184.1 Protein Homology CDS 54192 54692 . - 0 ID=cds-WP_223962520.1;Parent=gene-LDO45_RS16395;Dbxref=GenBank:WP_223962520.1;Name=WP_223962520.1;gbkey=CDS;gene=cblA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367293.1;locus_tag=LDO45_RS16395;product=cable pilus major pilin CblA;protein_id=WP_223962520.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 54696 55424 . - . ID=gene-LDO45_RS16400;Name=LDO45_RS16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16400;old_locus_tag=BDI4_300065 NZ_CAJZAS010000184.1 Protein Homology CDS 54696 55424 . - 0 ID=cds-WP_290371019.1;Parent=gene-LDO45_RS16400;Dbxref=GenBank:WP_290371019.1;Name=WP_290371019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367292.1;locus_tag=LDO45_RS16400;product=fimbrial protein;protein_id=WP_290371019.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 55915 56592 . - . ID=gene-LDO45_RS16405;Name=LDO45_RS16405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16405;old_locus_tag=BDI4_300069 NZ_CAJZAS010000184.1 Protein Homology CDS 55915 56592 . - 0 ID=cds-WP_223962524.1;Parent=gene-LDO45_RS16405;Dbxref=GenBank:WP_223962524.1;Name=WP_223962524.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696099.1;locus_tag=LDO45_RS16405;product=response regulator transcription factor;protein_id=WP_223962524.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 56768 57424 . - . ID=gene-LDO45_RS16410;Name=LDO45_RS16410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16410;old_locus_tag=BDI4_300071 NZ_CAJZAS010000184.1 Protein Homology CDS 56768 57424 . - 0 ID=cds-WP_223962526.1;Parent=gene-LDO45_RS16410;Dbxref=GenBank:WP_223962526.1;Name=WP_223962526.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018417447.1;locus_tag=LDO45_RS16410;product=response regulator transcription factor;protein_id=WP_223962526.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 57505 60996 . + . ID=gene-LDO45_RS16415;Name=LDO45_RS16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16415;old_locus_tag=BDI4_300072 NZ_CAJZAS010000184.1 Protein Homology CDS 57505 60996 . + 0 ID=cds-WP_223962528.1;Parent=gene-LDO45_RS16415;Dbxref=GenBank:WP_223962528.1;Name=WP_223962528.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.5;locus_tag=LDO45_RS16415;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_223962528.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 61003 61278 . - . ID=gene-LDO45_RS16420;Name=LDO45_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16420 NZ_CAJZAS010000184.1 GeneMarkS-2+ CDS 61003 61278 . - 0 ID=cds-WP_223962530.1;Parent=gene-LDO45_RS16420;Dbxref=GenBank:WP_223962530.1;Name=WP_223962530.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS16420;product=hypothetical protein;protein_id=WP_223962530.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 61282 61536 . + . ID=gene-LDO45_RS16425;Name=LDO45_RS16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16425;old_locus_tag=BDI4_300074 NZ_CAJZAS010000184.1 Protein Homology CDS 61282 61536 . + 0 ID=cds-WP_223962532.1;Parent=gene-LDO45_RS16425;Dbxref=GenBank:WP_223962532.1;Name=WP_223962532.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021628.5;locus_tag=LDO45_RS16425;product=Mu-like prophage major head subunit gpT family protein;protein_id=WP_223962532.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 61822 62094 . - . ID=gene-LDO45_RS16430;Name=LDO45_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16430 NZ_CAJZAS010000184.1 GeneMarkS-2+ CDS 61822 62094 . - 0 ID=cds-WP_223962534.1;Parent=gene-LDO45_RS16430;Dbxref=GenBank:WP_223962534.1;Name=WP_223962534.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS16430;product=hypothetical protein;protein_id=WP_223962534.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 62107 63369 . - . ID=gene-LDO45_RS16435;Name=LDO45_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16435;old_locus_tag=BDI4_300075 NZ_CAJZAS010000184.1 Protein Homology CDS 62107 63369 . - 0 ID=cds-WP_374109538.1;Parent=gene-LDO45_RS16435;Dbxref=GenBank:WP_374109538.1;Name=WP_374109538.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406175.1;locus_tag=LDO45_RS16435;product=right-handed parallel beta-helix repeat-containing protein;protein_id=WP_374109538.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq pseudogene 63792 64037 . + . ID=gene-LDO45_RS16440;Name=LDO45_RS16440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS16440;partial=true;pseudo=true;start_range=.,63792 NZ_CAJZAS010000184.1 Protein Homology CDS 63792 64037 . + 0 ID=cds-LDO45_RS16440;Parent=gene-LDO45_RS16440;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413479.1;locus_tag=LDO45_RS16440;partial=true;product=TetR/AcrR family transcriptional regulator;pseudo=true;start_range=.,63792;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 64122 64622 . - . ID=gene-LDO45_RS16445;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=LDO45_RS16445;old_locus_tag=BDI4_300077 NZ_CAJZAS010000184.1 Protein Homology CDS 64122 64622 . - 0 ID=cds-WP_223962538.1;Parent=gene-LDO45_RS16445;Dbxref=GenBank:WP_223962538.1;Name=WP_223962538.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364416.1;locus_tag=LDO45_RS16445;product=serine protease inhibitor ecotin;protein_id=WP_223962538.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 64766 65143 . + . ID=gene-LDO45_RS16450;Name=LDO45_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16450;old_locus_tag=BDI4_300079 NZ_CAJZAS010000184.1 Protein Homology CDS 64766 65143 . + 0 ID=cds-WP_223962540.1;Parent=gene-LDO45_RS16450;Dbxref=GenBank:WP_223962540.1;Name=WP_223962540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328976.1;locus_tag=LDO45_RS16450;product=hypothetical protein;protein_id=WP_223962540.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 65327 65728 . - . ID=gene-LDO45_RS16455;Name=LDO45_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16455;old_locus_tag=BDI4_300080 NZ_CAJZAS010000184.1 Protein Homology CDS 65327 65728 . - 0 ID=cds-WP_059703483.1;Parent=gene-LDO45_RS16455;Dbxref=GenBank:WP_059703483.1;Name=WP_059703483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364418.1;locus_tag=LDO45_RS16455;product=hypothetical protein;protein_id=WP_059703483.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 65846 66226 . + . ID=gene-LDO45_RS16460;Name=LDO45_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16460;old_locus_tag=BDI4_300081 NZ_CAJZAS010000184.1 Protein Homology CDS 65846 66226 . + 0 ID=cds-WP_223962541.1;Parent=gene-LDO45_RS16460;Dbxref=GenBank:WP_223962541.1;Name=WP_223962541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896388.1;locus_tag=LDO45_RS16460;product=DUF5594 family protein;protein_id=WP_223962541.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 66413 67780 . + . ID=gene-LDO45_RS16465;Name=LDO45_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16465;old_locus_tag=BDI4_300082 NZ_CAJZAS010000184.1 Protein Homology CDS 66413 67780 . + 0 ID=cds-WP_223962542.1;Parent=gene-LDO45_RS16465;Dbxref=GenBank:WP_223962542.1;Name=WP_223962542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352837.1;locus_tag=LDO45_RS16465;product=MFS transporter;protein_id=WP_223962542.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 67806 68384 . - . ID=gene-LDO45_RS16470;Name=LDO45_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16470;old_locus_tag=BDI4_300083 NZ_CAJZAS010000184.1 Protein Homology CDS 67806 68384 . - 0 ID=cds-WP_223962543.1;Parent=gene-LDO45_RS16470;Dbxref=GenBank:WP_223962543.1;Name=WP_223962543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761349.1;locus_tag=LDO45_RS16470;product=AAA family ATPase;protein_id=WP_223962543.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 68377 69798 . - . ID=gene-LDO45_RS16475;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=LDO45_RS16475;old_locus_tag=BDI4_300084 NZ_CAJZAS010000184.1 Protein Homology CDS 68377 69798 . - 0 ID=cds-WP_223962544.1;Parent=gene-LDO45_RS16475;Dbxref=GenBank:WP_223962544.1;Name=WP_223962544.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657614.1;locus_tag=LDO45_RS16475;product=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming);protein_id=WP_223962544.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 69949 70134 . - . ID=gene-LDO45_RS16480;Name=LDO45_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16480;old_locus_tag=BDI4_300085 NZ_CAJZAS010000184.1 Protein Homology CDS 69949 70134 . - 0 ID=cds-WP_223962545.1;Parent=gene-LDO45_RS16480;Dbxref=GenBank:WP_223962545.1;Name=WP_223962545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896384.1;locus_tag=LDO45_RS16480;product=hypothetical protein;protein_id=WP_223962545.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 70383 70973 . + . ID=gene-LDO45_RS16485;Name=LDO45_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16485;old_locus_tag=BDI4_300087 NZ_CAJZAS010000184.1 Protein Homology CDS 70383 70973 . + 0 ID=cds-WP_223962547.1;Parent=gene-LDO45_RS16485;Dbxref=GenBank:WP_223962547.1;Name=WP_223962547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896383.1;locus_tag=LDO45_RS16485;product=hypothetical protein;protein_id=WP_223962547.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 70970 71464 . + . ID=gene-LDO45_RS16490;Name=LDO45_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16490;old_locus_tag=BDI4_300088 NZ_CAJZAS010000184.1 Protein Homology CDS 70970 71464 . + 0 ID=cds-WP_223962549.1;Parent=gene-LDO45_RS16490;Dbxref=GenBank:WP_223962549.1;Name=WP_223962549.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896382.1;locus_tag=LDO45_RS16490;product=hypothetical protein;protein_id=WP_223962549.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 71535 72872 . - . ID=gene-LDO45_RS16495;Name=LDO45_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16495;old_locus_tag=BDI4_300089 NZ_CAJZAS010000184.1 Protein Homology CDS 71535 72872 . - 0 ID=cds-WP_059468207.1;Parent=gene-LDO45_RS16495;Dbxref=GenBank:WP_059468207.1;Name=WP_059468207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892432.1;locus_tag=LDO45_RS16495;product=AAA-associated domain-containing protein;protein_id=WP_059468207.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 72895 74652 . - . ID=gene-LDO45_RS16500;Name=LDO45_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16500;old_locus_tag=BDI4_300090 NZ_CAJZAS010000184.1 Protein Homology CDS 72895 74652 . - 0 ID=cds-WP_059527462.1;Parent=gene-LDO45_RS16500;Dbxref=GenBank:WP_059527462.1;Name=WP_059527462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892433.1;locus_tag=LDO45_RS16500;product=ABC transporter permease subunit;protein_id=WP_059527462.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 75158 75424 . + . ID=gene-LDO45_RS16505;Name=LDO45_RS16505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16505;old_locus_tag=BDI4_300091 NZ_CAJZAS010000184.1 Protein Homology CDS 75158 75424 . + 0 ID=cds-WP_006398649.1;Parent=gene-LDO45_RS16505;Dbxref=GenBank:WP_006398649.1;Name=WP_006398649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876700.1;locus_tag=LDO45_RS16505;product=hypothetical protein;protein_id=WP_006398649.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 75465 76781 . - . ID=gene-LDO45_RS16510;Name=LDO45_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16510;old_locus_tag=BDI4_300092 NZ_CAJZAS010000184.1 Protein Homology CDS 75465 76781 . - 0 ID=cds-WP_223962551.1;Parent=gene-LDO45_RS16510;Dbxref=GenBank:WP_223962551.1;Name=WP_223962551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694353.1;locus_tag=LDO45_RS16510;product=ATP-binding protein;protein_id=WP_223962551.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 76765 77490 . - . ID=gene-LDO45_RS16515;Name=LDO45_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16515;old_locus_tag=BDI4_300093 NZ_CAJZAS010000184.1 Protein Homology CDS 76765 77490 . - 0 ID=cds-WP_059527468.1;Parent=gene-LDO45_RS16515;Dbxref=GenBank:WP_059527468.1;Name=WP_059527468.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699030.1;locus_tag=LDO45_RS16515;product=response regulator;protein_id=WP_059527468.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 77715 78266 . + . ID=gene-LDO45_RS16520;Name=LDO45_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16520;old_locus_tag=BDI4_300094 NZ_CAJZAS010000184.1 Protein Homology CDS 77715 78266 . + 0 ID=cds-WP_059701941.1;Parent=gene-LDO45_RS16520;Dbxref=GenBank:WP_059701941.1;Name=WP_059701941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497152.1;locus_tag=LDO45_RS16520;product=Spy/CpxP family protein refolding chaperone;protein_id=WP_059701941.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 78337 79035 . - . ID=gene-LDO45_RS16525;Name=LDO45_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16525;old_locus_tag=BDI4_300095 NZ_CAJZAS010000184.1 Protein Homology CDS 78337 79035 . - 0 ID=cds-WP_223962571.1;Parent=gene-LDO45_RS16525;Dbxref=GenBank:WP_223962571.1;Name=WP_223962571.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553877.1;locus_tag=LDO45_RS16525;product=pirin family protein;protein_id=WP_223962571.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 79404 80180 . + . ID=gene-LDO45_RS16530;Name=LDO45_RS16530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16530;old_locus_tag=BDI4_300096 NZ_CAJZAS010000184.1 Protein Homology CDS 79404 80180 . + 0 ID=cds-WP_059451025.1;Parent=gene-LDO45_RS16530;Dbxref=GenBank:WP_059451025.1;Name=WP_059451025.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024925.1;locus_tag=LDO45_RS16530;product=ABC transporter substrate-binding protein;protein_id=WP_059451025.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 80408 81097 . + . ID=gene-LDO45_RS16535;Name=LDO45_RS16535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16535;old_locus_tag=BDI4_300097 NZ_CAJZAS010000184.1 Protein Homology CDS 80408 81097 . + 0 ID=cds-WP_059527478.1;Parent=gene-LDO45_RS16535;Dbxref=GenBank:WP_059527478.1;Name=WP_059527478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522525.1;locus_tag=LDO45_RS16535;product=ABC transporter permease;protein_id=WP_059527478.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 81094 81807 . + . ID=gene-LDO45_RS16540;Name=LDO45_RS16540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16540;old_locus_tag=BDI4_300098 NZ_CAJZAS010000184.1 Protein Homology CDS 81094 81807 . + 0 ID=cds-WP_059527481.1;Parent=gene-LDO45_RS16540;Dbxref=GenBank:WP_059527481.1;Name=WP_059527481.1;Ontology_term=GO:0022857,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065252.1;locus_tag=LDO45_RS16540;product=ABC transporter permease;protein_id=WP_059527481.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 81826 82605 . + . ID=gene-LDO45_RS16545;Name=LDO45_RS16545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16545;old_locus_tag=BDI4_300099 NZ_CAJZAS010000184.1 Protein Homology CDS 81826 82605 . + 0 ID=cds-WP_059527484.1;Parent=gene-LDO45_RS16545;Dbxref=GenBank:WP_059527484.1;Name=WP_059527484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896370.1;locus_tag=LDO45_RS16545;product=ABC transporter ATP-binding protein;protein_id=WP_059527484.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 82661 83158 . - . ID=gene-LDO45_RS16550;Name=LDO45_RS16550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16550;old_locus_tag=BDI4_300100 NZ_CAJZAS010000184.1 Protein Homology CDS 82661 83158 . - 0 ID=cds-WP_059527488.1;Parent=gene-LDO45_RS16550;Dbxref=GenBank:WP_059527488.1;Name=WP_059527488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102272.1;locus_tag=LDO45_RS16550;product=GNAT family N-acetyltransferase;protein_id=WP_059527488.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 83295 84221 . + . ID=gene-LDO45_RS16555;Name=LDO45_RS16555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16555;old_locus_tag=BDI4_300101 NZ_CAJZAS010000184.1 Protein Homology CDS 83295 84221 . + 0 ID=cds-WP_223962553.1;Parent=gene-LDO45_RS16555;Dbxref=GenBank:WP_223962553.1;Name=WP_223962553.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352856.1;locus_tag=LDO45_RS16555;product=LysR family transcriptional regulator;protein_id=WP_223962553.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 84798 85880 . + . ID=gene-LDO45_RS16560;Name=LDO45_RS16560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16560;old_locus_tag=BDI4_300103 NZ_CAJZAS010000184.1 Protein Homology CDS 84798 85880 . + 0 ID=cds-WP_059528295.1;Parent=gene-LDO45_RS16560;Dbxref=GenBank:WP_059528295.1;Name=WP_059528295.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398638.1;locus_tag=LDO45_RS16560;product=porin;protein_id=WP_059528295.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 86049 86387 . - . ID=gene-LDO45_RS16565;Name=LDO45_RS16565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16565;old_locus_tag=BDI4_300104 NZ_CAJZAS010000184.1 Protein Homology CDS 86049 86387 . - 0 ID=cds-WP_006398637.1;Parent=gene-LDO45_RS16565;Dbxref=GenBank:WP_006398637.1;Name=WP_006398637.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018419771.1;locus_tag=LDO45_RS16565;product=P-II family nitrogen regulator;protein_id=WP_006398637.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 86471 88177 . - . ID=gene-LDO45_RS16570;Name=LDO45_RS16570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16570;old_locus_tag=BDI4_300105 NZ_CAJZAS010000184.1 Protein Homology CDS 86471 88177 . - 0 ID=cds-WP_059528297.1;Parent=gene-LDO45_RS16570;Dbxref=GenBank:WP_059528297.1;Name=WP_059528297.1;Ontology_term=GO:0009435,GO:0003952,GO:0005524;gbkey=CDS;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,ATP binding|0005524||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545936.1;locus_tag=LDO45_RS16570;product=NAD+ synthase;protein_id=WP_059528297.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 88287 89468 . + . ID=gene-LDO45_RS16575;Name=LDO45_RS16575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16575;old_locus_tag=BDI4_300106 NZ_CAJZAS010000184.1 Protein Homology CDS 88287 89468 . + 0 ID=cds-WP_059527491.1;Parent=gene-LDO45_RS16575;Dbxref=GenBank:WP_059527491.1;Name=WP_059527491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364435.1;locus_tag=LDO45_RS16575;product=GNAT family N-acetyltransferase;protein_id=WP_059527491.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 89574 90434 . + . ID=gene-LDO45_RS16580;Name=LDO45_RS16580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16580;old_locus_tag=BDI4_300107 NZ_CAJZAS010000184.1 Protein Homology CDS 89574 90434 . + 0 ID=cds-WP_223962556.1;Parent=gene-LDO45_RS16580;Dbxref=GenBank:WP_223962556.1;Name=WP_223962556.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489661.1;locus_tag=LDO45_RS16580;product=GIY-YIG nuclease family protein;protein_id=WP_223962556.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 90492 91019 . - . ID=gene-LDO45_RS16585;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=LDO45_RS16585;old_locus_tag=BDI4_300108 NZ_CAJZAS010000184.1 Protein Homology CDS 90492 91019 . - 0 ID=cds-WP_011885693.1;Parent=gene-LDO45_RS16585;Dbxref=GenBank:WP_011885693.1;Name=WP_011885693.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007587974.1;locus_tag=LDO45_RS16585;product=inorganic diphosphatase;protein_id=WP_011885693.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 91283 92722 . + . ID=gene-LDO45_RS16590;Name=LDO45_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16590;old_locus_tag=BDI4_300109 NZ_CAJZAS010000184.1 Protein Homology CDS 91283 92722 . + 0 ID=cds-WP_223962558.1;Parent=gene-LDO45_RS16590;Dbxref=GenBank:WP_223962558.1;Name=WP_223962558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352864.1;locus_tag=LDO45_RS16590;product=aldehyde dehydrogenase family protein;protein_id=WP_223962558.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 92798 93556 . + . ID=gene-LDO45_RS16595;Name=LDO45_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16595;old_locus_tag=BDI4_300110 NZ_CAJZAS010000184.1 Protein Homology CDS 92798 93556 . + 0 ID=cds-WP_059527501.1;Parent=gene-LDO45_RS16595;Dbxref=GenBank:WP_059527501.1;Name=WP_059527501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543860.1;locus_tag=LDO45_RS16595;product=SDR family oxidoreductase;protein_id=WP_059527501.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 93688 94992 . + . ID=gene-LDO45_RS16600;Name=LDO45_RS16600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16600;old_locus_tag=BDI4_300111 NZ_CAJZAS010000184.1 Protein Homology CDS 93688 94992 . + 0 ID=cds-WP_059527504.1;Parent=gene-LDO45_RS16600;Dbxref=GenBank:WP_059527504.1;Name=WP_059527504.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753435.1;locus_tag=LDO45_RS16600;product=MFS transporter;protein_id=WP_059527504.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 95098 96285 . - . ID=gene-LDO45_RS16605;Name=LDO45_RS16605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16605;old_locus_tag=BDI4_300112 NZ_CAJZAS010000184.1 Protein Homology CDS 95098 96285 . - 0 ID=cds-WP_223962560.1;Parent=gene-LDO45_RS16605;Dbxref=GenBank:WP_223962560.1;Name=WP_223962560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193604.1;locus_tag=LDO45_RS16605;product=heme biosynthesis protein HemY;protein_id=WP_223962560.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 96288 98264 . - . ID=gene-LDO45_RS16610;Name=hemDX;gbkey=Gene;gene=hemDX;gene_biotype=protein_coding;locus_tag=LDO45_RS16610;old_locus_tag=BDI4_300113 NZ_CAJZAS010000184.1 Protein Homology CDS 96288 98264 . - 0 ID=cds-WP_223962561.1;Parent=gene-LDO45_RS16610;Dbxref=GenBank:WP_223962561.1;Name=WP_223962561.1;Ontology_term=GO:0033014,GO:0004852;gbkey=CDS;gene=hemDX;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010114401.1;locus_tag=LDO45_RS16610;product=fused uroporphyrinogen-III synthase HemD/membrane protein HemX;protein_id=WP_223962561.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 98264 99265 . - . ID=gene-LDO45_RS16615;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=LDO45_RS16615;old_locus_tag=BDI4_300114 NZ_CAJZAS010000184.1 Protein Homology CDS 98264 99265 . - 0 ID=cds-WP_059527523.1;Parent=gene-LDO45_RS16615;Dbxref=GenBank:WP_059527523.1;Name=WP_059527523.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885699.1;locus_tag=LDO45_RS16615;product=hydroxymethylbilane synthase;protein_id=WP_059527523.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 99484 102498 . + . ID=gene-LDO45_RS16620;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=LDO45_RS16620;old_locus_tag=BDI4_300115 NZ_CAJZAS010000184.1 Protein Homology CDS 99484 102498 . + 0 ID=cds-WP_223962562.1;Parent=gene-LDO45_RS16620;Dbxref=GenBank:WP_223962562.1;Name=WP_223962562.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212910.1;locus_tag=LDO45_RS16620;product=phosphoenolpyruvate carboxylase;protein_id=WP_223962562.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 102647 103399 . - . ID=gene-LDO45_RS16625;Name=LDO45_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16625;old_locus_tag=BDI4_300116 NZ_CAJZAS010000184.1 Protein Homology CDS 102647 103399 . - 0 ID=cds-WP_223962563.1;Parent=gene-LDO45_RS16625;Dbxref=GenBank:WP_223962563.1;Name=WP_223962563.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333860.1;locus_tag=LDO45_RS16625;product=class I SAM-dependent methyltransferase;protein_id=WP_223962563.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 103562 104371 . + . ID=gene-LDO45_RS16630;Name=LDO45_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16630;old_locus_tag=BDI4_300117 NZ_CAJZAS010000184.1 Protein Homology CDS 103562 104371 . + 0 ID=cds-WP_059468225.1;Parent=gene-LDO45_RS16630;Dbxref=GenBank:WP_059468225.1;Name=WP_059468225.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492931.1;locus_tag=LDO45_RS16630;product=helix-turn-helix transcriptional regulator;protein_id=WP_059468225.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 104378 105373 . - . ID=gene-LDO45_RS16635;Name=LDO45_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16635;old_locus_tag=BDI4_300118 NZ_CAJZAS010000184.1 Protein Homology CDS 104378 105373 . - 0 ID=cds-WP_223962564.1;Parent=gene-LDO45_RS16635;Dbxref=GenBank:WP_223962564.1;Name=WP_223962564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364447.1;locus_tag=LDO45_RS16635;product=spore coat U domain-containing protein;protein_id=WP_223962564.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 105673 106209 . + . ID=gene-LDO45_RS16640;Name=LDO45_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16640;old_locus_tag=BDI4_300119 NZ_CAJZAS010000184.1 Protein Homology CDS 105673 106209 . + 0 ID=cds-WP_223962565.1;Parent=gene-LDO45_RS16640;Dbxref=GenBank:WP_223962565.1;Name=WP_223962565.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755113.1;locus_tag=LDO45_RS16640;product=spore coat U domain-containing protein;protein_id=WP_223962565.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 106216 106929 . + . ID=gene-LDO45_RS16645;Name=LDO45_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16645;old_locus_tag=BDI4_300120 NZ_CAJZAS010000184.1 Protein Homology CDS 106216 106929 . + 0 ID=cds-WP_223962566.1;Parent=gene-LDO45_RS16645;Dbxref=GenBank:WP_223962566.1;Name=WP_223962566.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364449.1;locus_tag=LDO45_RS16645;product=molecular chaperone;protein_id=WP_223962566.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 106954 109332 . + . ID=gene-LDO45_RS16650;Name=LDO45_RS16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16650;old_locus_tag=BDI4_300121 NZ_CAJZAS010000184.1 Protein Homology CDS 106954 109332 . + 0 ID=cds-WP_223962567.1;Parent=gene-LDO45_RS16650;Dbxref=GenBank:WP_223962567.1;Name=WP_223962567.1;Ontology_term=GO:0009297,GO:0015473;gbkey=CDS;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755115.1;locus_tag=LDO45_RS16650;product=fimbria/pilus outer membrane usher protein;protein_id=WP_223962567.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 109444 110853 . + . ID=gene-LDO45_RS16655;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=LDO45_RS16655;old_locus_tag=BDI4_300122 NZ_CAJZAS010000184.1 Protein Homology CDS 109444 110853 . + 0 ID=cds-WP_059527543.1;Parent=gene-LDO45_RS16655;Dbxref=GenBank:WP_059527543.1;Name=WP_059527543.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762488.1;locus_tag=LDO45_RS16655;product=argininosuccinate lyase;protein_id=WP_059527543.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 110948 111631 . + . ID=gene-LDO45_RS16660;Name=LDO45_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16660;old_locus_tag=BDI4_300123 NZ_CAJZAS010000184.1 Protein Homology CDS 110948 111631 . + 0 ID=cds-WP_059527546.1;Parent=gene-LDO45_RS16660;Dbxref=GenBank:WP_059527546.1;Name=WP_059527546.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755117.1;locus_tag=LDO45_RS16660;product=HAD family phosphatase;protein_id=WP_059527546.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 111722 112549 . - . ID=gene-LDO45_RS16665;Name=LDO45_RS16665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16665;old_locus_tag=BDI4_300124 NZ_CAJZAS010000184.1 Protein Homology CDS 111722 112549 . - 0 ID=cds-WP_059527548.1;Parent=gene-LDO45_RS16665;Dbxref=GenBank:WP_059527548.1;Name=WP_059527548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364453.1;locus_tag=LDO45_RS16665;product=lysozyme inhibitor LprI family protein;protein_id=WP_059527548.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 112549 114828 . - . ID=gene-LDO45_RS16670;Name=LDO45_RS16670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16670;old_locus_tag=BDI4_300125 NZ_CAJZAS010000184.1 Protein Homology CDS 112549 114828 . - 0 ID=cds-WP_059527551.1;Parent=gene-LDO45_RS16670;Dbxref=GenBank:WP_059527551.1;Name=WP_059527551.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491304.1;locus_tag=LDO45_RS16670;product=arginine/lysine/ornithine decarboxylase;protein_id=WP_059527551.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 114910 115479 . - . ID=gene-LDO45_RS16675;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=LDO45_RS16675;old_locus_tag=BDI4_300126 NZ_CAJZAS010000184.1 Protein Homology CDS 114910 115479 . - 0 ID=cds-WP_006398615.1;Parent=gene-LDO45_RS16675;Dbxref=GenBank:WP_006398615.1;Name=WP_006398615.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398615.1;locus_tag=LDO45_RS16675;product=dCTP deaminase;protein_id=WP_006398615.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 115592 116128 . - . ID=gene-LDO45_RS16680;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=LDO45_RS16680;old_locus_tag=BDI4_300127 NZ_CAJZAS010000184.1 Protein Homology CDS 115592 116128 . - 0 ID=cds-WP_059527554.1;Parent=gene-LDO45_RS16680;Dbxref=GenBank:WP_059527554.1;Name=WP_059527554.1;gbkey=CDS;gene=sodC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493653.1;locus_tag=LDO45_RS16680;product=superoxide dismutase [Cu-Zn];protein_id=WP_059527554.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 116262 117353 . - . ID=gene-LDO45_RS16685;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=LDO45_RS16685;old_locus_tag=BDI4_300128 NZ_CAJZAS010000184.1 Protein Homology CDS 116262 117353 . - 0 ID=cds-WP_059820258.1;Parent=gene-LDO45_RS16685;Dbxref=GenBank:WP_059820258.1;Name=WP_059820258.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600266.1;locus_tag=LDO45_RS16685;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_059820258.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 117704 118345 . + . ID=gene-LDO45_RS16690;Name=LDO45_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16690;old_locus_tag=BDI4_300129 NZ_CAJZAS010000184.1 Protein Homology CDS 117704 118345 . + 0 ID=cds-WP_059527561.1;Parent=gene-LDO45_RS16690;Dbxref=GenBank:WP_059527561.1;Name=WP_059527561.1;Ontology_term=GO:0015288,GO:0042834;gbkey=CDS;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896346.1;locus_tag=LDO45_RS16690;product=OmpA family protein;protein_id=WP_059527561.1;transl_table=11 NZ_CAJZAS010000184.1 RefSeq gene 118716 120872 . + . ID=gene-LDO45_RS16695;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=LDO45_RS16695;old_locus_tag=BDI4_300130 NZ_CAJZAS010000184.1 Protein Homology CDS 118716 120872 . + 0 ID=cds-WP_223962569.1;Parent=gene-LDO45_RS16695;Dbxref=GenBank:WP_223962569.1;Name=WP_223962569.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657654.1;locus_tag=LDO45_RS16695;product=methionine--tRNA ligase;protein_id=WP_223962569.1;transl_table=11 ##sequence-region NZ_CAJZAS010000185.1 1 24022 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000185.1 RefSeq region 1 24022 . + . ID=NZ_CAJZAS010000185.1:1..24022;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_31 NZ_CAJZAS010000185.1 RefSeq pseudogene 1 1322 . - . ID=gene-LDO45_RS16700;Name=LDO45_RS16700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS16700;old_locus_tag=BDI4_310002;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000185.1 Protein Homology CDS 1 1322 . - 0 ID=cds-LDO45_RS16700;Parent=gene-LDO45_RS16700;Note=too many ambiguous residues%3B incomplete%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019938530.1;locus_tag=LDO45_RS16700;partial=true;product=AMP-binding protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000185.1 RefSeq gene 1638 2555 . + . ID=gene-LDO45_RS16705;Name=LDO45_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16705;old_locus_tag=BDI4_310003 NZ_CAJZAS010000185.1 Protein Homology CDS 1638 2555 . + 0 ID=cds-WP_059702726.1;Parent=gene-LDO45_RS16705;Dbxref=GenBank:WP_059702726.1;Name=WP_059702726.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549404.1;locus_tag=LDO45_RS16705;product=DMT family transporter;protein_id=WP_059702726.1;transl_table=11 NZ_CAJZAS010000185.1 RefSeq gene 2669 3274 . + . ID=gene-LDO45_RS16710;Name=LDO45_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16710;old_locus_tag=BDI4_310004 NZ_CAJZAS010000185.1 Protein Homology CDS 2669 3274 . + 0 ID=cds-WP_223962575.1;Parent=gene-LDO45_RS16710;Dbxref=GenBank:WP_223962575.1;Name=WP_223962575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896552.1;locus_tag=LDO45_RS16710;product=TIGR00645 family protein;protein_id=WP_223962575.1;transl_table=11 NZ_CAJZAS010000185.1 RefSeq gene 3309 4832 . + . ID=gene-LDO45_RS16715;Name=LDO45_RS16715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16715;old_locus_tag=BDI4_310005 NZ_CAJZAS010000185.1 Protein Homology CDS 3309 4832 . + 0 ID=cds-WP_006478316.1;Parent=gene-LDO45_RS16715;Dbxref=GenBank:WP_006478316.1;Name=WP_006478316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549402.1;locus_tag=LDO45_RS16715;product=fumarate hydratase;protein_id=WP_006478316.1;transl_table=11 NZ_CAJZAS010000185.1 RefSeq gene 5024 5500 . + . ID=gene-LDO45_RS16720;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=LDO45_RS16720;old_locus_tag=BDI4_310007 NZ_CAJZAS010000185.1 Protein Homology CDS 5024 5500 . + 0 ID=cds-WP_059535536.1;Parent=gene-LDO45_RS16720;Dbxref=GenBank:WP_059535536.1;Name=WP_059535536.1;Ontology_term=GO:0006879,GO:0006880,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA,intracellular sequestering of iron ion|0006880||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006028498.1;locus_tag=LDO45_RS16720;product=bacterioferritin;protein_id=WP_059535536.1;transl_table=11 NZ_CAJZAS010000185.1 RefSeq gene 5538 6401 . + . ID=gene-LDO45_RS16725;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=LDO45_RS16725;old_locus_tag=BDI4_310008 NZ_CAJZAS010000185.1 Protein Homology CDS 5538 6401 . + 0 ID=cds-WP_223962577.1;Parent=gene-LDO45_RS16725;Dbxref=GenBank:WP_223962577.1;Name=WP_223962577.1;Ontology_term=GO:0009252,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755388.1;locus_tag=LDO45_RS16725;product=glutamate racemase;protein_id=WP_223962577.1;transl_table=11 NZ_CAJZAS010000185.1 RefSeq gene 6550 6786 . + . ID=gene-LDO45_RS16730;Name=LDO45_RS16730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16730;old_locus_tag=BDI4_310009 NZ_CAJZAS010000185.1 Protein Homology CDS 6550 6786 . + 0 ID=cds-WP_011885486.1;Parent=gene-LDO45_RS16730;Dbxref=GenBank:WP_011885486.1;Name=WP_011885486.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187745.1;locus_tag=LDO45_RS16730;product=bacterioferritin-associated ferredoxin;protein_id=WP_011885486.1;transl_table=11 NZ_CAJZAS010000185.1 RefSeq gene 7004 7735 . + . ID=gene-LDO45_RS16735;Name=LDO45_RS16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16735;old_locus_tag=BDI4_310011 NZ_CAJZAS010000185.1 Protein Homology CDS 7004 7735 . + 0 ID=cds-WP_223962579.1;Parent=gene-LDO45_RS16735;Dbxref=GenBank:WP_223962579.1;Name=WP_223962579.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492728.1;locus_tag=LDO45_RS16735;product=energy transducer TonB;protein_id=WP_223962579.1;transl_table=11 NZ_CAJZAS010000185.1 RefSeq gene 7770 8501 . + . ID=gene-LDO45_RS16740;Name=LDO45_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16740;old_locus_tag=BDI4_310012 NZ_CAJZAS010000185.1 Protein Homology CDS 7770 8501 . + 0 ID=cds-WP_059449473.1;Parent=gene-LDO45_RS16740;Dbxref=GenBank:WP_059449473.1;Name=WP_059449473.1;Ontology_term=GO:0015031,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188455.1;locus_tag=LDO45_RS16740;product=MotA/TolQ/ExbB proton channel family protein;protein_id=WP_059449473.1;transl_table=11 NZ_CAJZAS010000185.1 RefSeq gene 8515 8943 . + . ID=gene-LDO45_RS16745;Name=LDO45_RS16745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16745;old_locus_tag=BDI4_310013 NZ_CAJZAS010000185.1 Protein Homology CDS 8515 8943 . + 0 ID=cds-WP_006754473.1;Parent=gene-LDO45_RS16745;Dbxref=GenBank:WP_006754473.1;Name=WP_006754473.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011401478.1;locus_tag=LDO45_RS16745;product=biopolymer transporter ExbD;protein_id=WP_006754473.1;transl_table=11 NZ_CAJZAS010000185.1 RefSeq gene 8987 9145 . - . ID=gene-LDO45_RS16750;Name=LDO45_RS16750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16750;old_locus_tag=BDI4_310014 NZ_CAJZAS010000185.1 GeneMarkS-2+ CDS 8987 9145 . - 0 ID=cds-WP_223962581.1;Parent=gene-LDO45_RS16750;Dbxref=GenBank:WP_223962581.1;Name=WP_223962581.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS16750;product=hypothetical protein;protein_id=WP_223962581.1;transl_table=11 NZ_CAJZAS010000185.1 RefSeq gene 9337 10314 . - . ID=gene-LDO45_RS16755;Name=LDO45_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16755;old_locus_tag=BDI4_310015 NZ_CAJZAS010000185.1 Protein Homology CDS 9337 10314 . - 0 ID=cds-WP_223962583.1;Parent=gene-LDO45_RS16755;Dbxref=GenBank:WP_223962583.1;Name=WP_223962583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407935.1;locus_tag=LDO45_RS16755;product=LysR family transcriptional regulator;protein_id=WP_223962583.1;transl_table=11 NZ_CAJZAS010000185.1 RefSeq gene 10437 11309 . + . ID=gene-LDO45_RS16760;Name=LDO45_RS16760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16760;old_locus_tag=BDI4_310016 NZ_CAJZAS010000185.1 Protein Homology CDS 10437 11309 . + 0 ID=cds-WP_223962585.1;Parent=gene-LDO45_RS16760;Dbxref=GenBank:WP_223962585.1;Name=WP_223962585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525407.1;locus_tag=LDO45_RS16760;product=pirin family protein;protein_id=WP_223962585.1;transl_table=11 NZ_CAJZAS010000185.1 RefSeq gene 11409 11891 . + . ID=gene-LDO45_RS16765;Name=LDO45_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16765;old_locus_tag=BDI4_310017 NZ_CAJZAS010000185.1 Protein Homology CDS 11409 11891 . + 0 ID=cds-WP_059535558.1;Parent=gene-LDO45_RS16765;Dbxref=GenBank:WP_059535558.1;Name=WP_059535558.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011852697.1;locus_tag=LDO45_RS16765;product=SRPBCC family protein;protein_id=WP_059535558.1;transl_table=11 NZ_CAJZAS010000185.1 RefSeq gene 12030 12275 . + . ID=gene-LDO45_RS16770;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=LDO45_RS16770;old_locus_tag=BDI4_310018 NZ_CAJZAS010000185.1 Protein Homology CDS 12030 12275 . + 0 ID=cds-WP_039322336.1;Parent=gene-LDO45_RS16770;Dbxref=GenBank:WP_039322336.1;Name=WP_039322336.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478306.1;locus_tag=LDO45_RS16770;product=hemin uptake protein HemP;protein_id=WP_039322336.1;transl_table=11 NZ_CAJZAS010000185.1 RefSeq gene 12605 14002 . - . ID=gene-LDO45_RS16775;Name=LDO45_RS16775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16775;old_locus_tag=BDI4_310019 NZ_CAJZAS010000185.1 Protein Homology CDS 12605 14002 . - 0 ID=cds-WP_223962587.1;Parent=gene-LDO45_RS16775;Dbxref=GenBank:WP_223962587.1;Name=WP_223962587.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352662.1;locus_tag=LDO45_RS16775;product=4Fe-4S binding protein;protein_id=WP_223962587.1;transl_table=11 NZ_CAJZAS010000185.1 RefSeq gene 13999 14841 . - . ID=gene-LDO45_RS16780;Name=LDO45_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16780;old_locus_tag=BDI4_310020 NZ_CAJZAS010000185.1 Protein Homology CDS 13999 14841 . - 0 ID=cds-WP_059535552.1;Parent=gene-LDO45_RS16780;Dbxref=GenBank:WP_059535552.1;Name=WP_059535552.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009914340.1;locus_tag=LDO45_RS16780;product=FTR1 family protein;protein_id=WP_059535552.1;transl_table=11 NZ_CAJZAS010000185.1 RefSeq gene 14900 15232 . - . ID=gene-LDO45_RS16785;Name=LDO45_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16785;old_locus_tag=BDI4_310021 NZ_CAJZAS010000185.1 Protein Homology CDS 14900 15232 . - 0 ID=cds-WP_006760846.1;Parent=gene-LDO45_RS16785;Dbxref=GenBank:WP_006760846.1;Name=WP_006760846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763873.1;locus_tag=LDO45_RS16785;product=cupredoxin domain-containing protein;protein_id=WP_006760846.1;transl_table=11 NZ_CAJZAS010000185.1 RefSeq gene 15288 15839 . - . ID=gene-LDO45_RS16790;Name=LDO45_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16790;old_locus_tag=BDI4_310022 NZ_CAJZAS010000185.1 Protein Homology CDS 15288 15839 . - 0 ID=cds-WP_057929472.1;Parent=gene-LDO45_RS16790;Dbxref=GenBank:WP_057929472.1;Name=WP_057929472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407929.1;locus_tag=LDO45_RS16790;product=iron transporter;protein_id=WP_057929472.1;transl_table=11 NZ_CAJZAS010000185.1 RefSeq gene 16059 18149 . - . ID=gene-LDO45_RS16795;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=LDO45_RS16795;old_locus_tag=BDI4_310023 NZ_CAJZAS010000185.1 Protein Homology CDS 16059 18149 . - 0 ID=cds-WP_059535554.1;Parent=gene-LDO45_RS16795;Dbxref=GenBank:WP_059535554.1;Name=WP_059535554.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364293.1;locus_tag=LDO45_RS16795;product=excinuclease ABC subunit UvrB;protein_id=WP_059535554.1;transl_table=11 NZ_CAJZAS010000185.1 RefSeq gene 18400 19599 . + . ID=gene-LDO45_RS16800;Name=LDO45_RS16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16800;old_locus_tag=BDI4_310024 NZ_CAJZAS010000185.1 Protein Homology CDS 18400 19599 . + 0 ID=cds-WP_059535557.1;Parent=gene-LDO45_RS16800;Dbxref=GenBank:WP_059535557.1;Name=WP_059535557.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009932860.1;locus_tag=LDO45_RS16800;product=amino acid aminotransferase;protein_id=WP_059535557.1;transl_table=11 NZ_CAJZAS010000185.1 RefSeq pseudogene 19742 20530 . - . ID=gene-LDO45_RS16805;Name=LDO45_RS16805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS16805;pseudo=true NZ_CAJZAS010000185.1 Protein Homology CDS 19742 20530 . - 0 ID=cds-LDO45_RS16805;Parent=gene-LDO45_RS16805;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885500.1;locus_tag=LDO45_RS16805;product=3-hydroxybutyrate dehydrogenase;pseudo=true;transl_table=11 NZ_CAJZAS010000185.1 RefSeq gene 20694 21665 . + . ID=gene-LDO45_RS16810;Name=LDO45_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16810;old_locus_tag=BDI4_310027 NZ_CAJZAS010000185.1 Protein Homology CDS 20694 21665 . + 0 ID=cds-WP_223962589.1;Parent=gene-LDO45_RS16810;Dbxref=GenBank:WP_223962589.1;Name=WP_223962589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004535190.1;locus_tag=LDO45_RS16810;product=aldo/keto reductase;protein_id=WP_223962589.1;transl_table=11 NZ_CAJZAS010000185.1 RefSeq gene 21777 22622 . + . ID=gene-LDO45_RS16815;Name=LDO45_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16815;old_locus_tag=BDI4_310028 NZ_CAJZAS010000185.1 Protein Homology CDS 21777 22622 . + 0 ID=cds-WP_223962591.1;Parent=gene-LDO45_RS16815;Dbxref=GenBank:WP_223962591.1;Name=WP_223962591.1;Ontology_term=GO:0070475,GO:0008988;gbkey=CDS;go_function=rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA;go_process=rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755756.1;locus_tag=LDO45_RS16815;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_223962591.1;transl_table=11 NZ_CAJZAS010000185.1 RefSeq gene 22638 22973 . - . ID=gene-LDO45_RS16820;Name=LDO45_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16820;old_locus_tag=BDI4_310029 NZ_CAJZAS010000185.1 Protein Homology CDS 22638 22973 . - 0 ID=cds-WP_223962592.1;Parent=gene-LDO45_RS16820;Dbxref=GenBank:WP_223962592.1;Name=WP_223962592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328888.1;locus_tag=LDO45_RS16820;product=hypothetical protein;protein_id=WP_223962592.1;transl_table=11 NZ_CAJZAS010000185.1 RefSeq gene 23120 23266 . - . ID=gene-LDO45_RS16825;Name=LDO45_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16825;old_locus_tag=BDI4_310030 NZ_CAJZAS010000185.1 Protein Homology CDS 23120 23266 . - 0 ID=cds-WP_006478295.1;Parent=gene-LDO45_RS16825;Dbxref=GenBank:WP_006478295.1;Name=WP_006478295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763866.1;locus_tag=LDO45_RS16825;product=DUF3563 family protein;protein_id=WP_006478295.1;transl_table=11 NZ_CAJZAS010000185.1 RefSeq gene 23482 23886 . - . ID=gene-LDO45_RS16830;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=LDO45_RS16830;old_locus_tag=BDI4_310031 NZ_CAJZAS010000185.1 Protein Homology CDS 23482 23886 . - 0 ID=cds-WP_059701975.1;Parent=gene-LDO45_RS16830;Dbxref=GenBank:WP_059701975.1;Name=WP_059701975.1;Ontology_term=GO:0045893,GO:0003677,GO:0003700,GO:0005507;gbkey=CDS;gene=cueR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,copper ion binding|0005507||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885505.1;locus_tag=LDO45_RS16830;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_059701975.1;transl_table=11 ##sequence-region NZ_CAJZAS010000186.1 1 108630 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000186.1 RefSeq region 1 108630 . + . ID=NZ_CAJZAS010000186.1:1..108630;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_32 NZ_CAJZAS010000186.1 RefSeq gene 173 724 . - . ID=gene-LDO45_RS16835;Name=LDO45_RS16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16835;old_locus_tag=BDI4_320001 NZ_CAJZAS010000186.1 Protein Homology CDS 173 724 . - 0 ID=cds-WP_223962593.1;Parent=gene-LDO45_RS16835;Dbxref=GenBank:WP_223962593.1;Name=WP_223962593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353968.1;locus_tag=LDO45_RS16835;product=phosphonate degradation HD-domain oxygenase;protein_id=WP_223962593.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 729 2183 . - . ID=gene-LDO45_RS16840;Name=phnY;gbkey=Gene;gene=phnY;gene_biotype=protein_coding;locus_tag=LDO45_RS16840;old_locus_tag=BDI4_320002 NZ_CAJZAS010000186.1 Protein Homology CDS 729 2183 . - 0 ID=cds-WP_223962594.1;Parent=gene-LDO45_RS16840;Dbxref=GenBank:WP_223962594.1;Name=WP_223962594.1;gbkey=CDS;gene=phnY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406897.1;locus_tag=LDO45_RS16840;product=phosphonoacetaldehyde dehydrogenase;protein_id=WP_223962594.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 2180 3490 . - . ID=gene-LDO45_RS16845;Name=phnA;gbkey=Gene;gene=phnA;gene_biotype=protein_coding;locus_tag=LDO45_RS16845;old_locus_tag=BDI4_320003 NZ_CAJZAS010000186.1 Protein Homology CDS 2180 3490 . - 0 ID=cds-WP_223962595.1;Parent=gene-LDO45_RS16845;Dbxref=GenBank:WP_223962595.1;Name=WP_223962595.1;Ontology_term=GO:0019636,GO:0047400;gbkey=CDS;gene=phnA;go_function=phosphonoacetate hydrolase activity|0047400||IEA;go_process=phosphonoacetate metabolic process|0019636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546901.1;locus_tag=LDO45_RS16845;product=phosphonoacetate hydrolase;protein_id=WP_223962595.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 3487 4347 . - . ID=gene-LDO45_RS16850;Name=phnV;gbkey=Gene;gene=phnV;gene_biotype=protein_coding;locus_tag=LDO45_RS16850;old_locus_tag=BDI4_320004 NZ_CAJZAS010000186.1 Protein Homology CDS 3487 4347 . - 0 ID=cds-WP_175908482.1;Parent=gene-LDO45_RS16850;Dbxref=GenBank:WP_175908482.1;Name=WP_175908482.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnV;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756345.1;locus_tag=LDO45_RS16850;product=2-aminoethylphosphonate ABC transport system%2C membrane component PhnV;protein_id=WP_175908482.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 4337 5257 . - . ID=gene-LDO45_RS16855;Name=phnU;gbkey=Gene;gene=phnU;gene_biotype=protein_coding;locus_tag=LDO45_RS16855;old_locus_tag=BDI4_320005 NZ_CAJZAS010000186.1 Protein Homology CDS 4337 5257 . - 0 ID=cds-WP_223962596.1;Parent=gene-LDO45_RS16855;Dbxref=GenBank:WP_223962596.1;Name=WP_223962596.1;Ontology_term=GO:0033223,GO:0033225,GO:0016020;gbkey=CDS;gene=phnU;go_component=membrane|0016020||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414767.1;locus_tag=LDO45_RS16855;product=2-aminoethylphosphonate ABC transporter permease subunit;protein_id=WP_223962596.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 5235 6338 . - . ID=gene-LDO45_RS16860;Name=phnT;gbkey=Gene;gene=phnT;gene_biotype=protein_coding;locus_tag=LDO45_RS16860;old_locus_tag=BDI4_320006 NZ_CAJZAS010000186.1 Protein Homology CDS 5235 6338 . - 0 ID=cds-WP_223962597.1;Parent=gene-LDO45_RS16860;Dbxref=GenBank:WP_223962597.1;Name=WP_223962597.1;Ontology_term=GO:0033223,GO:0005524,GO:0033225,GO:0009898,GO:0055052;gbkey=CDS;gene=phnT;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014901035.1;locus_tag=LDO45_RS16860;product=2-aminoethylphosphonate ABC transport system ATP-binding subunit PhnT;protein_id=WP_223962597.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 6373 7464 . - . ID=gene-LDO45_RS16865;Name=phnS;gbkey=Gene;gene=phnS;gene_biotype=protein_coding;locus_tag=LDO45_RS16865;old_locus_tag=BDI4_320007 NZ_CAJZAS010000186.1 Protein Homology CDS 6373 7464 . - 0 ID=cds-WP_223962599.1;Parent=gene-LDO45_RS16865;Dbxref=GenBank:WP_223962599.1;Name=WP_223962599.1;Ontology_term=GO:0033223,GO:0033225,GO:0033226,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=phnS;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled 2-aminoethylphosphonate transporter activity|0033225||IEA,2-aminoethylphosphonate binding|0033226||IEA;go_process=2-aminoethylphosphonate transport|0033223||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406893.1;locus_tag=LDO45_RS16865;product=2-aminoethylphosphonate ABC transporter substrate-binding protein;protein_id=WP_223962599.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 7721 8830 . + . ID=gene-LDO45_RS16870;Name=LDO45_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16870;old_locus_tag=BDI4_320008 NZ_CAJZAS010000186.1 Protein Homology CDS 7721 8830 . + 0 ID=cds-WP_223962601.1;Parent=gene-LDO45_RS16870;Dbxref=GenBank:WP_223962601.1;Name=WP_223962601.1;Ontology_term=GO:0019700,GO:0047304;gbkey=CDS;go_function=2-aminoethylphosphonate-pyruvate transaminase activity|0047304||IEA;go_process=organic phosphonate catabolic process|0019700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546896.1;locus_tag=LDO45_RS16870;product=2-aminoethylphosphonate--pyruvate transaminase;protein_id=WP_223962601.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 8936 10276 . - . ID=gene-LDO45_RS16875;Name=LDO45_RS16875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16875;old_locus_tag=BDI4_320009 NZ_CAJZAS010000186.1 Protein Homology CDS 8936 10276 . - 0 ID=cds-WP_059697933.1;Parent=gene-LDO45_RS16875;Dbxref=GenBank:WP_059697933.1;Name=WP_059697933.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480491.1;locus_tag=LDO45_RS16875;product=MFS transporter;protein_id=WP_059697933.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 10318 11172 . - . ID=gene-LDO45_RS16880;Name=LDO45_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16880;old_locus_tag=BDI4_320010 NZ_CAJZAS010000186.1 Protein Homology CDS 10318 11172 . - 0 ID=cds-WP_223962603.1;Parent=gene-LDO45_RS16880;Dbxref=GenBank:WP_223962603.1;Name=WP_223962603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602966.1;locus_tag=LDO45_RS16880;product=shikimate dehydrogenase;protein_id=WP_223962603.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 11169 11624 . - . ID=gene-LDO45_RS16885;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=LDO45_RS16885;old_locus_tag=BDI4_320011 NZ_CAJZAS010000186.1 Protein Homology CDS 11169 11624 . - 0 ID=cds-WP_059528374.1;Parent=gene-LDO45_RS16885;Dbxref=GenBank:WP_059528374.1;Name=WP_059528374.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216377.1;locus_tag=LDO45_RS16885;product=type II 3-dehydroquinate dehydratase;protein_id=WP_059528374.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 11882 13774 . + . ID=gene-LDO45_RS16890;Name=LDO45_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16890;old_locus_tag=BDI4_320012 NZ_CAJZAS010000186.1 Protein Homology CDS 11882 13774 . + 0 ID=cds-WP_223962605.1;Parent=gene-LDO45_RS16890;Dbxref=GenBank:WP_223962605.1;Name=WP_223962605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546893.1;locus_tag=LDO45_RS16890;product=bifunctional sugar phosphate isomerase/epimerase/4-hydroxyphenylpyruvate dioxygenase family protein;protein_id=WP_223962605.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 14062 14325 . + . ID=gene-LDO45_RS16895;Name=LDO45_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16895;old_locus_tag=BDI4_320013 NZ_CAJZAS010000186.1 Protein Homology CDS 14062 14325 . + 0 ID=cds-WP_059528378.1;Parent=gene-LDO45_RS16895;Dbxref=GenBank:WP_059528378.1;Name=WP_059528378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756354.1;locus_tag=LDO45_RS16895;product=hypothetical protein;protein_id=WP_059528378.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 14413 15207 . - . ID=gene-LDO45_RS16900;Name=LDO45_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16900;old_locus_tag=BDI4_320014 NZ_CAJZAS010000186.1 Protein Homology CDS 14413 15207 . - 0 ID=cds-WP_059528381.1;Parent=gene-LDO45_RS16900;Dbxref=GenBank:WP_059528381.1;Name=WP_059528381.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880903.1;locus_tag=LDO45_RS16900;product=AraC family transcriptional regulator;protein_id=WP_059528381.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 15873 17009 . + . ID=gene-LDO45_RS16905;Name=LDO45_RS16905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16905;old_locus_tag=BDI4_320016 NZ_CAJZAS010000186.1 Protein Homology CDS 15873 17009 . + 0 ID=cds-WP_059529087.1;Parent=gene-LDO45_RS16905;Dbxref=GenBank:WP_059529087.1;Name=WP_059529087.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406882.1;locus_tag=LDO45_RS16905;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_059529087.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 17333 18643 . + . ID=gene-LDO45_RS16910;Name=LDO45_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16910;old_locus_tag=BDI4_320017 NZ_CAJZAS010000186.1 Protein Homology CDS 17333 18643 . + 0 ID=cds-WP_059528387.1;Parent=gene-LDO45_RS16910;Dbxref=GenBank:WP_059528387.1;Name=WP_059528387.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494264.1;locus_tag=LDO45_RS16910;product=MFS transporter;protein_id=WP_059528387.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 18773 19210 . - . ID=gene-LDO45_RS16915;Name=LDO45_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16915;old_locus_tag=BDI4_320018 NZ_CAJZAS010000186.1 Protein Homology CDS 18773 19210 . - 0 ID=cds-WP_059528390.1;Parent=gene-LDO45_RS16915;Dbxref=GenBank:WP_059528390.1;Name=WP_059528390.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015604064.1;locus_tag=LDO45_RS16915;product=DoxX family protein;protein_id=WP_059528390.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 19436 19891 . - . ID=gene-LDO45_RS16920;Name=LDO45_RS16920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16920;old_locus_tag=BDI4_320019 NZ_CAJZAS010000186.1 Protein Homology CDS 19436 19891 . - 0 ID=cds-WP_223962607.1;Parent=gene-LDO45_RS16920;Dbxref=GenBank:WP_223962607.1;Name=WP_223962607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353949.1;locus_tag=LDO45_RS16920;product=RbsD/FucU family protein;protein_id=WP_223962607.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 19970 20362 . - . ID=gene-LDO45_RS16925;Name=LDO45_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16925;old_locus_tag=BDI4_320020 NZ_CAJZAS010000186.1 Protein Homology CDS 19970 20362 . - 0 ID=cds-WP_223962609.1;Parent=gene-LDO45_RS16925;Dbxref=GenBank:WP_223962609.1;Name=WP_223962609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752323.1;locus_tag=LDO45_RS16925;product=nuclear transport factor 2 family protein;protein_id=WP_223962609.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 20544 22097 . - . ID=gene-LDO45_RS16930;Name=garD;gbkey=Gene;gene=garD;gene_biotype=protein_coding;locus_tag=LDO45_RS16930;old_locus_tag=BDI4_320021 NZ_CAJZAS010000186.1 Protein Homology CDS 20544 22097 . - 0 ID=cds-WP_223962611.1;Parent=gene-LDO45_RS16930;Dbxref=GenBank:WP_223962611.1;Name=WP_223962611.1;Ontology_term=GO:0046392,GO:0008867;gbkey=CDS;gene=garD;go_function=galactarate dehydratase activity|0008867||IEA;go_process=galactarate catabolic process|0046392||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756361.1;locus_tag=LDO45_RS16930;product=galactarate dehydratase;protein_id=WP_223962611.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 22328 23242 . + . ID=gene-LDO45_RS16935;Name=kdgD;gbkey=Gene;gene=kdgD;gene_biotype=protein_coding;locus_tag=LDO45_RS16935;old_locus_tag=BDI4_320022 NZ_CAJZAS010000186.1 Protein Homology CDS 22328 23242 . + 0 ID=cds-WP_059528402.1;Parent=gene-LDO45_RS16935;Dbxref=GenBank:WP_059528402.1;Name=WP_059528402.1;Ontology_term=GO:0016052,GO:0047448;gbkey=CDS;gene=kdgD;go_function=5-dehydro-4-deoxyglucarate dehydratase activity|0047448||IEA;go_process=carbohydrate catabolic process|0016052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094246.1;locus_tag=LDO45_RS16935;product=5-dehydro-4-deoxyglucarate dehydratase;protein_id=WP_059528402.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 23349 23900 . - . ID=gene-LDO45_RS16940;Name=LDO45_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16940;old_locus_tag=BDI4_320023 NZ_CAJZAS010000186.1 Protein Homology CDS 23349 23900 . - 0 ID=cds-WP_059528404.1;Parent=gene-LDO45_RS16940;Dbxref=GenBank:WP_059528404.1;Name=WP_059528404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752327.1;locus_tag=LDO45_RS16940;product=hypothetical protein;protein_id=WP_059528404.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 24093 25670 . - . ID=gene-LDO45_RS16945;Name=LDO45_RS16945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16945;old_locus_tag=BDI4_320024 NZ_CAJZAS010000186.1 Protein Homology CDS 24093 25670 . - 0 ID=cds-WP_223962613.1;Parent=gene-LDO45_RS16945;Dbxref=GenBank:WP_223962613.1;Name=WP_223962613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406866.1;locus_tag=LDO45_RS16945;product=aldehyde dehydrogenase (NADP(+));protein_id=WP_223962613.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 26115 26840 . - . ID=gene-LDO45_RS16950;Name=LDO45_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16950;old_locus_tag=BDI4_320025 NZ_CAJZAS010000186.1 Protein Homology CDS 26115 26840 . - 0 ID=cds-WP_059508586.1;Parent=gene-LDO45_RS16950;Dbxref=GenBank:WP_059508586.1;Name=WP_059508586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752332.1;locus_tag=LDO45_RS16950;product=site-2 protease family protein;protein_id=WP_059508586.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 26837 27799 . - . ID=gene-LDO45_RS16955;Name=LDO45_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16955;old_locus_tag=BDI4_320026 NZ_CAJZAS010000186.1 Protein Homology CDS 26837 27799 . - 0 ID=cds-WP_223962615.1;Parent=gene-LDO45_RS16955;Dbxref=GenBank:WP_223962615.1;Name=WP_223962615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659639.1;locus_tag=LDO45_RS16955;product=DUF2167 domain-containing protein;protein_id=WP_223962615.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 28067 28915 . + . ID=gene-LDO45_RS16960;Name=LDO45_RS16960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16960;old_locus_tag=BDI4_320027 NZ_CAJZAS010000186.1 Protein Homology CDS 28067 28915 . + 0 ID=cds-WP_223962617.1;Parent=gene-LDO45_RS16960;Dbxref=GenBank:WP_223962617.1;Name=WP_223962617.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880912.1;locus_tag=LDO45_RS16960;product=helix-turn-helix domain-containing protein;protein_id=WP_223962617.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq pseudogene 28991 29230 . + . ID=gene-LDO45_RS16965;Name=LDO45_RS16965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS16965;old_locus_tag=BDI4_320028;partial=true;pseudo=true;start_range=.,28991 NZ_CAJZAS010000186.1 Protein Homology CDS 28991 29230 . + 0 ID=cds-LDO45_RS16965;Parent=gene-LDO45_RS16965;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014901010.1;locus_tag=LDO45_RS16965;partial=true;product=Lrp/AsnC ligand binding domain-containing protein;pseudo=true;start_range=.,28991;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 29202 29648 . - . ID=gene-LDO45_RS16970;Name=LDO45_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16970 NZ_CAJZAS010000186.1 GeneMarkS-2+ CDS 29202 29648 . - 0 ID=cds-WP_223962619.1;Parent=gene-LDO45_RS16970;Dbxref=GenBank:WP_223962619.1;Name=WP_223962619.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS16970;product=hypothetical protein;protein_id=WP_223962619.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 30036 31763 . + . ID=gene-LDO45_RS16975;Name=LDO45_RS16975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16975;old_locus_tag=BDI4_320030 NZ_CAJZAS010000186.1 Protein Homology CDS 30036 31763 . + 0 ID=cds-WP_223962621.1;Parent=gene-LDO45_RS16975;Dbxref=GenBank:WP_223962621.1;Name=WP_223962621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756369.1;locus_tag=LDO45_RS16975;product=YadA family autotransporter adhesin;protein_id=WP_223962621.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 31806 33017 . - . ID=gene-LDO45_RS16980;Name=LDO45_RS16980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16980;old_locus_tag=BDI4_320031 NZ_CAJZAS010000186.1 Protein Homology CDS 31806 33017 . - 0 ID=cds-WP_223962623.1;Parent=gene-LDO45_RS16980;Dbxref=GenBank:WP_223962623.1;Name=WP_223962623.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014901008.1;locus_tag=LDO45_RS16980;product=acyl-CoA dehydrogenase family protein;protein_id=WP_223962623.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 33014 33871 . - . ID=gene-LDO45_RS16985;Name=LDO45_RS16985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16985;old_locus_tag=BDI4_320032 NZ_CAJZAS010000186.1 Protein Homology CDS 33014 33871 . - 0 ID=cds-WP_223962625.1;Parent=gene-LDO45_RS16985;Dbxref=GenBank:WP_223962625.1;Name=WP_223962625.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494248.1;locus_tag=LDO45_RS16985;product=hypothetical protein;protein_id=WP_223962625.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 33926 34582 . - . ID=gene-LDO45_RS16990;Name=LDO45_RS16990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16990;old_locus_tag=BDI4_320033 NZ_CAJZAS010000186.1 Protein Homology CDS 33926 34582 . - 0 ID=cds-WP_047902352.1;Parent=gene-LDO45_RS16990;Dbxref=GenBank:WP_047902352.1;Name=WP_047902352.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491339.1;locus_tag=LDO45_RS16990;product=methionine ABC transporter permease;protein_id=WP_047902352.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 34575 35762 . - . ID=gene-LDO45_RS16995;Name=LDO45_RS16995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS16995;old_locus_tag=BDI4_320034 NZ_CAJZAS010000186.1 Protein Homology CDS 34575 35762 . - 0 ID=cds-WP_223962627.1;Parent=gene-LDO45_RS16995;Dbxref=GenBank:WP_223962627.1;Name=WP_223962627.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216356.1;locus_tag=LDO45_RS16995;product=methionine ABC transporter ATP-binding protein;protein_id=WP_223962627.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 35781 37199 . - . ID=gene-LDO45_RS17000;Name=LDO45_RS17000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17000;old_locus_tag=BDI4_320035 NZ_CAJZAS010000186.1 Protein Homology CDS 35781 37199 . - 0 ID=cds-WP_059528436.1;Parent=gene-LDO45_RS17000;Dbxref=GenBank:WP_059528436.1;Name=WP_059528436.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480459.1;locus_tag=LDO45_RS17000;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_059528436.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 37210 38040 . - . ID=gene-LDO45_RS17005;Name=LDO45_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17005;old_locus_tag=BDI4_320036 NZ_CAJZAS010000186.1 Protein Homology CDS 37210 38040 . - 0 ID=cds-WP_059528440.1;Parent=gene-LDO45_RS17005;Dbxref=GenBank:WP_059528440.1;Name=WP_059528440.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493141.1;locus_tag=LDO45_RS17005;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_059528440.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 38148 38351 . + . ID=gene-LDO45_RS17010;Name=LDO45_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17010;old_locus_tag=BDI4_320037 NZ_CAJZAS010000186.1 GeneMarkS-2+ CDS 38148 38351 . + 0 ID=cds-WP_223962629.1;Parent=gene-LDO45_RS17010;Dbxref=GenBank:WP_223962629.1;Name=WP_223962629.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS17010;product=hypothetical protein;protein_id=WP_223962629.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 38465 39829 . + . ID=gene-LDO45_RS17015;Name=LDO45_RS17015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17015;old_locus_tag=BDI4_320038 NZ_CAJZAS010000186.1 Protein Homology CDS 38465 39829 . + 0 ID=cds-WP_059692283.1;Parent=gene-LDO45_RS17015;Dbxref=GenBank:WP_059692283.1;Name=WP_059692283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014901002.1;locus_tag=LDO45_RS17015;product=2-hydroxycarboxylate transporter family protein;protein_id=WP_059692283.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 39972 41867 . + . ID=gene-LDO45_RS17020;Name=LDO45_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17020;old_locus_tag=BDI4_320039 NZ_CAJZAS010000186.1 Protein Homology CDS 39972 41867 . + 0 ID=cds-WP_223962631.1;Parent=gene-LDO45_RS17020;Dbxref=GenBank:WP_223962631.1;Name=WP_223962631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406854.1;locus_tag=LDO45_RS17020;product=ATP-binding protein;protein_id=WP_223962631.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 41857 43218 . + . ID=gene-LDO45_RS17025;Name=LDO45_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17025;old_locus_tag=BDI4_320040 NZ_CAJZAS010000186.1 Protein Homology CDS 41857 43218 . + 0 ID=cds-WP_223962633.1;Parent=gene-LDO45_RS17025;Dbxref=GenBank:WP_223962633.1;Name=WP_223962633.1;Ontology_term=GO:0006355,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339347.1;locus_tag=LDO45_RS17025;product=sigma-54 dependent transcriptional regulator;protein_id=WP_223962633.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 43239 43568 . + . ID=gene-LDO45_RS17030;Name=LDO45_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17030;old_locus_tag=BDI4_320041 NZ_CAJZAS010000186.1 Protein Homology CDS 43239 43568 . + 0 ID=cds-WP_223962635.1;Parent=gene-LDO45_RS17030;Dbxref=GenBank:WP_223962635.1;Name=WP_223962635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366903.1;locus_tag=LDO45_RS17030;product=DUF3579 domain-containing protein;protein_id=WP_223962635.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 44068 44250 . + . ID=gene-LDO45_RS17035;Name=LDO45_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17035;old_locus_tag=BDI4_320043 NZ_CAJZAS010000186.1 Protein Homology CDS 44068 44250 . + 0 ID=cds-WP_223962637.1;Parent=gene-LDO45_RS17035;Dbxref=GenBank:WP_223962637.1;Name=WP_223962637.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366702.1;locus_tag=LDO45_RS17035;product=hypothetical protein;protein_id=WP_223962637.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 44350 45540 . + . ID=gene-LDO45_RS17040;Name=LDO45_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17040;old_locus_tag=BDI4_320044 NZ_CAJZAS010000186.1 Protein Homology CDS 44350 45540 . + 0 ID=cds-WP_223962639.1;Parent=gene-LDO45_RS17040;Dbxref=GenBank:WP_223962639.1;Name=WP_223962639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010111786.1;locus_tag=LDO45_RS17040;product=hypothetical protein;protein_id=WP_223962639.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 45540 46739 . + . ID=gene-LDO45_RS17045;Name=LDO45_RS17045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17045;old_locus_tag=BDI4_320045 NZ_CAJZAS010000186.1 Protein Homology CDS 45540 46739 . + 0 ID=cds-WP_223962640.1;Parent=gene-LDO45_RS17045;Dbxref=GenBank:WP_223962640.1;Name=WP_223962640.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019719261.1;locus_tag=LDO45_RS17045;product=MFS transporter;protein_id=WP_223962640.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 46739 47620 . + . ID=gene-LDO45_RS17050;Name=LDO45_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17050;old_locus_tag=BDI4_320046 NZ_CAJZAS010000186.1 Protein Homology CDS 46739 47620 . + 0 ID=cds-WP_223962642.1;Parent=gene-LDO45_RS17050;Dbxref=GenBank:WP_223962642.1;Name=WP_223962642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011003803.1;locus_tag=LDO45_RS17050;product=trans-aconitate 2-methyltransferase;protein_id=WP_223962642.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 47627 48322 . + . ID=gene-LDO45_RS17055;Name=LDO45_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17055;old_locus_tag=BDI4_320047 NZ_CAJZAS010000186.1 Protein Homology CDS 47627 48322 . + 0 ID=cds-WP_223962644.1;Parent=gene-LDO45_RS17055;Dbxref=GenBank:WP_223962644.1;Name=WP_223962644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014631067.1;locus_tag=LDO45_RS17055;product=hypothetical protein;protein_id=WP_223962644.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 48330 49553 . + . ID=gene-LDO45_RS17060;Name=LDO45_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17060;old_locus_tag=BDI4_320048 NZ_CAJZAS010000186.1 Protein Homology CDS 48330 49553 . + 0 ID=cds-WP_082725506.1;Parent=gene-LDO45_RS17060;Dbxref=GenBank:WP_082725506.1;Name=WP_082725506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010111794.1;locus_tag=LDO45_RS17060;product=DUF2087 domain-containing protein;protein_id=WP_082725506.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 49938 50789 . + . ID=gene-LDO45_RS17065;Name=LDO45_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17065;old_locus_tag=BDI4_320049 NZ_CAJZAS010000186.1 Protein Homology CDS 49938 50789 . + 0 ID=cds-WP_223962645.1;Parent=gene-LDO45_RS17065;Dbxref=GenBank:WP_223962645.1;Name=WP_223962645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366906.1;locus_tag=LDO45_RS17065;product=alpha/beta fold hydrolase;protein_id=WP_223962645.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 50899 51339 . - . ID=gene-LDO45_RS17070;Name=LDO45_RS17070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17070;old_locus_tag=BDI4_320050 NZ_CAJZAS010000186.1 Protein Homology CDS 50899 51339 . - 0 ID=cds-WP_059528471.1;Parent=gene-LDO45_RS17070;Dbxref=GenBank:WP_059528471.1;Name=WP_059528471.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756381.1;locus_tag=LDO45_RS17070;product=PACE efflux transporter;protein_id=WP_059528471.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 51438 52328 . + . ID=gene-LDO45_RS17075;Name=LDO45_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17075;old_locus_tag=BDI4_320051 NZ_CAJZAS010000186.1 Protein Homology CDS 51438 52328 . + 0 ID=cds-WP_223962647.1;Parent=gene-LDO45_RS17075;Dbxref=GenBank:WP_223962647.1;Name=WP_223962647.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353914.1;locus_tag=LDO45_RS17075;product=LysR family transcriptional regulator;protein_id=WP_223962647.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 52562 54097 . - . ID=gene-LDO45_RS17080;Name=opcM;gbkey=Gene;gene=opcM;gene_biotype=protein_coding;locus_tag=LDO45_RS17080;old_locus_tag=BDI4_320052 NZ_CAJZAS010000186.1 Protein Homology CDS 52562 54097 . - 0 ID=cds-WP_223962649.1;Parent=gene-LDO45_RS17080;Dbxref=GenBank:WP_223962649.1;Name=WP_223962649.1;gbkey=CDS;gene=opcM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484479.1;locus_tag=LDO45_RS17080;product=multidrug efflux transporter outer membrane subunit OpcM;protein_id=WP_223962649.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 54108 57308 . - . ID=gene-LDO45_RS17085;Name=ceoB;gbkey=Gene;gene=ceoB;gene_biotype=protein_coding;locus_tag=LDO45_RS17085;old_locus_tag=BDI4_320053 NZ_CAJZAS010000186.1 Protein Homology CDS 54108 57308 . - 0 ID=cds-WP_059528481.1;Parent=gene-LDO45_RS17085;Dbxref=GenBank:WP_059528481.1;Name=WP_059528481.1;gbkey=CDS;gene=ceoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880927.1;locus_tag=LDO45_RS17085;product=multidrug efflux RND transporter permease subunit CeoB;protein_id=WP_059528481.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 57355 58572 . - . ID=gene-LDO45_RS17090;Name=ceoA;gbkey=Gene;gene=ceoA;gene_biotype=protein_coding;locus_tag=LDO45_RS17090;old_locus_tag=BDI4_320054 NZ_CAJZAS010000186.1 Protein Homology CDS 57355 58572 . - 0 ID=cds-WP_059528484.1;Parent=gene-LDO45_RS17090;Dbxref=GenBank:WP_059528484.1;Name=WP_059528484.1;gbkey=CDS;gene=ceoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484484.1;locus_tag=LDO45_RS17090;product=multidrug efflux RND transporter periplasmic adaptor subunit CeoA;protein_id=WP_059528484.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 58604 59464 . - . ID=gene-LDO45_RS17095;Name=LDO45_RS17095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17095;old_locus_tag=BDI4_320055 NZ_CAJZAS010000186.1 Protein Homology CDS 58604 59464 . - 0 ID=cds-WP_059814924.1;Parent=gene-LDO45_RS17095;Dbxref=GenBank:WP_059814924.1;Name=WP_059814924.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659656.1;locus_tag=LDO45_RS17095;product=alpha/beta hydrolase;protein_id=WP_059814924.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 59638 60642 . + . ID=gene-LDO45_RS17100;Name=ceoR;gbkey=Gene;gene=ceoR;gene_biotype=protein_coding;locus_tag=LDO45_RS17100;old_locus_tag=BDI4_320056 NZ_CAJZAS010000186.1 Protein Homology CDS 59638 60642 . + 0 ID=cds-WP_059528491.1;Parent=gene-LDO45_RS17100;Dbxref=GenBank:WP_059528491.1;Name=WP_059528491.1;gbkey=CDS;gene=ceoR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484497.1;locus_tag=LDO45_RS17100;product=putative multidrug efflux transcriptional regulator CeoR;protein_id=WP_059528491.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 61060 61353 . + . ID=gene-LDO45_RS17105;Name=LDO45_RS17105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17105;old_locus_tag=BDI4_320057 NZ_CAJZAS010000186.1 Protein Homology CDS 61060 61353 . + 0 ID=cds-WP_059528494.1;Parent=gene-LDO45_RS17105;Dbxref=GenBank:WP_059528494.1;Name=WP_059528494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188266.1;locus_tag=LDO45_RS17105;product=DUF4148 domain-containing protein;protein_id=WP_059528494.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 61582 62661 . - . ID=gene-LDO45_RS17110;Name=LDO45_RS17110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17110;old_locus_tag=BDI4_320059 NZ_CAJZAS010000186.1 Protein Homology CDS 61582 62661 . - 0 ID=cds-WP_059528497.1;Parent=gene-LDO45_RS17110;Dbxref=GenBank:WP_059528497.1;Name=WP_059528497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188476.1;locus_tag=LDO45_RS17110;product=purine nucleoside permease;protein_id=WP_059528497.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 62897 63487 . - . ID=gene-LDO45_RS17115;Name=LDO45_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17115;old_locus_tag=BDI4_320060 NZ_CAJZAS010000186.1 Protein Homology CDS 62897 63487 . - 0 ID=cds-WP_223962651.1;Parent=gene-LDO45_RS17115;Dbxref=GenBank:WP_223962651.1;Name=WP_223962651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406835.1;locus_tag=LDO45_RS17115;product=LysE family translocator;protein_id=WP_223962651.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 63558 64622 . - . ID=gene-LDO45_RS17120;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=LDO45_RS17120;old_locus_tag=BDI4_320061 NZ_CAJZAS010000186.1 Protein Homology CDS 63558 64622 . - 0 ID=cds-WP_223962653.1;Parent=gene-LDO45_RS17120;Dbxref=GenBank:WP_223962653.1;Name=WP_223962653.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900987.1;locus_tag=LDO45_RS17120;product=selenide%2C water dikinase SelD;protein_id=WP_223962653.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 64737 65573 . + . ID=gene-LDO45_RS17125;Name=LDO45_RS17125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17125;old_locus_tag=BDI4_320062 NZ_CAJZAS010000186.1 Protein Homology CDS 64737 65573 . + 0 ID=cds-WP_223962656.1;Parent=gene-LDO45_RS17125;Dbxref=GenBank:WP_223962656.1;Name=WP_223962656.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900986.1;locus_tag=LDO45_RS17125;product=DMT family transporter;protein_id=WP_223962656.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 65670 67178 . - . ID=gene-LDO45_RS17130;Name=LDO45_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17130;old_locus_tag=BDI4_320063 NZ_CAJZAS010000186.1 Protein Homology CDS 65670 67178 . - 0 ID=cds-WP_059528508.1;Parent=gene-LDO45_RS17130;Dbxref=GenBank:WP_059528508.1;Name=WP_059528508.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491984.1;locus_tag=LDO45_RS17130;product=PLP-dependent aminotransferase family protein;protein_id=WP_059528508.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 67305 68588 . + . ID=gene-LDO45_RS17135;Name=LDO45_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17135;old_locus_tag=BDI4_320064 NZ_CAJZAS010000186.1 Protein Homology CDS 67305 68588 . + 0 ID=cds-WP_107938225.1;Parent=gene-LDO45_RS17135;Dbxref=GenBank:WP_107938225.1;Name=WP_107938225.1;Ontology_term=GO:0009448,GO:0003867,GO:0030170;gbkey=CDS;go_function=4-aminobutyrate transaminase activity|0003867||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=gamma-aminobutyric acid metabolic process|0009448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603826.1;locus_tag=LDO45_RS17135;product=4-aminobutyrate--2-oxoglutarate transaminase;protein_id=WP_107938225.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 68689 70158 . + . ID=gene-LDO45_RS17140;Name=gabD;gbkey=Gene;gene=gabD;gene_biotype=protein_coding;locus_tag=LDO45_RS17140;old_locus_tag=BDI4_320065 NZ_CAJZAS010000186.1 Protein Homology CDS 68689 70158 . + 0 ID=cds-WP_223962658.1;Parent=gene-LDO45_RS17140;Dbxref=GenBank:WP_223962658.1;Name=WP_223962658.1;Ontology_term=GO:0009450,GO:0009013;gbkey=CDS;gene=gabD;go_function=succinate-semialdehyde dehydrogenase [NAD(P)+] activity|0009013||IEA;go_process=gamma-aminobutyric acid catabolic process|0009450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894094.1;locus_tag=LDO45_RS17140;product=NADP-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_223962658.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 70275 71819 . - . ID=gene-LDO45_RS17145;Name=LDO45_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17145;old_locus_tag=BDI4_320066 NZ_CAJZAS010000186.1 Protein Homology CDS 70275 71819 . - 0 ID=cds-WP_223962660.1;Parent=gene-LDO45_RS17145;Dbxref=GenBank:WP_223962660.1;Name=WP_223962660.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659670.1;locus_tag=LDO45_RS17145;product=PAS domain-containing methyl-accepting chemotaxis protein;protein_id=WP_223962660.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 72215 73759 . - . ID=gene-LDO45_RS17150;Name=LDO45_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17150;old_locus_tag=BDI4_320067 NZ_CAJZAS010000186.1 Protein Homology CDS 72215 73759 . - 0 ID=cds-WP_223962662.1;Parent=gene-LDO45_RS17150;Dbxref=GenBank:WP_223962662.1;Name=WP_223962662.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659670.1;locus_tag=LDO45_RS17150;product=PAS domain-containing methyl-accepting chemotaxis protein;protein_id=WP_223962662.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 74299 74778 . + . ID=gene-LDO45_RS17155;Name=LDO45_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17155;old_locus_tag=BDI4_320068 NZ_CAJZAS010000186.1 Protein Homology CDS 74299 74778 . + 0 ID=cds-WP_374109539.1;Parent=gene-LDO45_RS17155;Dbxref=GenBank:WP_374109539.1;Name=WP_374109539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900979.1;locus_tag=LDO45_RS17155;product=DUF523 domain-containing protein;protein_id=WP_374109539.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 74876 76078 . - . ID=gene-LDO45_RS17160;Name=pcaF;gbkey=Gene;gene=pcaF;gene_biotype=protein_coding;locus_tag=LDO45_RS17160;old_locus_tag=BDI4_320069 NZ_CAJZAS010000186.1 Protein Homology CDS 74876 76078 . - 0 ID=cds-WP_059689352.1;Parent=gene-LDO45_RS17160;Dbxref=GenBank:WP_059689352.1;Name=WP_059689352.1;Ontology_term=GO:0019619,GO:0016747;gbkey=CDS;gene=pcaF;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197326.1;locus_tag=LDO45_RS17160;product=3-oxoadipyl-CoA thiolase;protein_id=WP_059689352.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 76306 77094 . + . ID=gene-LDO45_RS17165;Name=LDO45_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17165;old_locus_tag=BDI4_320070 NZ_CAJZAS010000186.1 Protein Homology CDS 76306 77094 . + 0 ID=cds-WP_059528522.1;Parent=gene-LDO45_RS17165;Dbxref=GenBank:WP_059528522.1;Name=WP_059528522.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010107642.1;locus_tag=LDO45_RS17165;product=IclR family transcriptional regulator;protein_id=WP_059528522.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 77254 78369 . - . ID=gene-LDO45_RS17170;Name=LDO45_RS17170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17170;old_locus_tag=BDI4_320071 NZ_CAJZAS010000186.1 Protein Homology CDS 77254 78369 . - 0 ID=cds-WP_223962666.1;Parent=gene-LDO45_RS17170;Dbxref=GenBank:WP_223962666.1;Name=WP_223962666.1;Ontology_term=GO:0008270,GO:0016788;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494219.1;locus_tag=LDO45_RS17170;product=succinylglutamate desuccinylase/aspartoacylase family protein;protein_id=WP_223962666.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 78414 79166 . - . ID=gene-LDO45_RS17175;Name=LDO45_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17175;old_locus_tag=BDI4_320072 NZ_CAJZAS010000186.1 Protein Homology CDS 78414 79166 . - 0 ID=cds-WP_223962690.1;Parent=gene-LDO45_RS17175;Dbxref=GenBank:WP_223962690.1;Name=WP_223962690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007582827.1;locus_tag=LDO45_RS17175;product=transporter substrate-binding domain-containing protein;protein_id=WP_223962690.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 79351 80271 . + . ID=gene-LDO45_RS17180;Name=LDO45_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17180;old_locus_tag=BDI4_320073 NZ_CAJZAS010000186.1 Protein Homology CDS 79351 80271 . + 0 ID=cds-WP_059689349.1;Parent=gene-LDO45_RS17180;Dbxref=GenBank:WP_059689349.1;Name=WP_059689349.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546832.1;locus_tag=LDO45_RS17180;product=LysR family transcriptional regulator;protein_id=WP_059689349.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 80306 81637 . - . ID=gene-LDO45_RS17185;Name=LDO45_RS17185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17185;old_locus_tag=BDI4_320074 NZ_CAJZAS010000186.1 Protein Homology CDS 80306 81637 . - 0 ID=cds-WP_223962667.1;Parent=gene-LDO45_RS17185;Dbxref=GenBank:WP_223962667.1;Name=WP_223962667.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757234.1;locus_tag=LDO45_RS17185;product=MFS transporter;protein_id=WP_223962667.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 81694 82884 . - . ID=gene-LDO45_RS17190;Name=LDO45_RS17190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17190;old_locus_tag=BDI4_320075 NZ_CAJZAS010000186.1 Protein Homology CDS 81694 82884 . - 0 ID=cds-WP_223962669.1;Parent=gene-LDO45_RS17190;Dbxref=GenBank:WP_223962669.1;Name=WP_223962669.1;Ontology_term=GO:0016787,GO:0016810;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757233.1;locus_tag=LDO45_RS17190;product=M20 aminoacylase family protein;protein_id=WP_223962669.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 83051 83185 . + . ID=gene-LDO45_RS34265;Name=LDO45_RS34265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34265 NZ_CAJZAS010000186.1 GeneMarkS-2+ CDS 83051 83185 . + 0 ID=cds-WP_290371021.1;Parent=gene-LDO45_RS34265;Dbxref=GenBank:WP_290371021.1;Name=WP_290371021.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34265;product=hypothetical protein;protein_id=WP_290371021.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 83271 83849 . + . ID=gene-LDO45_RS17195;Name=LDO45_RS17195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17195;old_locus_tag=BDI4_320077 NZ_CAJZAS010000186.1 Protein Homology CDS 83271 83849 . + 0 ID=cds-WP_223962671.1;Parent=gene-LDO45_RS17195;Dbxref=GenBank:WP_223962671.1;Name=WP_223962671.1;Note=This protein belongs to a clade of uncharacterized proteins related to peroxidases such as the alkylhydroperoxidase AhpD.;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549018.1;locus_tag=LDO45_RS17195;product=peroxidase-related enzyme;protein_id=WP_223962671.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 83919 84794 . - . ID=gene-LDO45_RS17200;Name=LDO45_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17200;old_locus_tag=BDI4_320078 NZ_CAJZAS010000186.1 Protein Homology CDS 83919 84794 . - 0 ID=cds-WP_223962673.1;Parent=gene-LDO45_RS17200;Dbxref=GenBank:WP_223962673.1;Name=WP_223962673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900920.1;locus_tag=LDO45_RS17200;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_223962673.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 84994 85572 . - . ID=gene-LDO45_RS17205;Name=LDO45_RS17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17205;old_locus_tag=BDI4_320079 NZ_CAJZAS010000186.1 Protein Homology CDS 84994 85572 . - 0 ID=cds-WP_223962675.1;Parent=gene-LDO45_RS17205;Dbxref=GenBank:WP_223962675.1;Name=WP_223962675.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366969.1;locus_tag=LDO45_RS17205;product=TetR/AcrR family transcriptional regulator;protein_id=WP_223962675.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 85775 87250 . + . ID=gene-LDO45_RS17210;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=LDO45_RS17210;old_locus_tag=BDI4_320081 NZ_CAJZAS010000186.1 Protein Homology CDS 85775 87250 . + 0 ID=cds-WP_223962677.1;Parent=gene-LDO45_RS17210;Dbxref=GenBank:WP_223962677.1;Name=WP_223962677.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900918.1;locus_tag=LDO45_RS17210;product=glucose-6-phosphate dehydrogenase;protein_id=WP_223962677.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 87350 88294 . - . ID=gene-LDO45_RS17215;Name=LDO45_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17215;old_locus_tag=BDI4_320082 NZ_CAJZAS010000186.1 Protein Homology CDS 87350 88294 . - 0 ID=cds-WP_223962679.1;Parent=gene-LDO45_RS17215;Dbxref=GenBank:WP_223962679.1;Name=WP_223962679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366971.1;locus_tag=LDO45_RS17215;product=LysR family transcriptional regulator;protein_id=WP_223962679.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 88396 89598 . + . ID=gene-LDO45_RS17220;Name=LDO45_RS17220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17220;old_locus_tag=BDI4_320083 NZ_CAJZAS010000186.1 Protein Homology CDS 88396 89598 . + 0 ID=cds-WP_059528553.1;Parent=gene-LDO45_RS17220;Dbxref=GenBank:WP_059528553.1;Name=WP_059528553.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480404.1;locus_tag=LDO45_RS17220;product=MFS transporter;protein_id=WP_059528553.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 89628 89951 . + . ID=gene-LDO45_RS17225;Name=LDO45_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17225;old_locus_tag=BDI4_320084 NZ_CAJZAS010000186.1 Protein Homology CDS 89628 89951 . + 0 ID=cds-WP_223962680.1;Parent=gene-LDO45_RS17225;Dbxref=GenBank:WP_223962680.1;Name=WP_223962680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900915.1;locus_tag=LDO45_RS17225;product=adenylate cyclase;protein_id=WP_223962680.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 89968 90924 . + . ID=gene-LDO45_RS17230;Name=LDO45_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17230;old_locus_tag=BDI4_320085 NZ_CAJZAS010000186.1 Protein Homology CDS 89968 90924 . + 0 ID=cds-WP_223962681.1;Parent=gene-LDO45_RS17230;Dbxref=GenBank:WP_223962681.1;Name=WP_223962681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482591.1;locus_tag=LDO45_RS17230;product=LLM class oxidoreductase;protein_id=WP_223962681.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 91074 91880 . + . ID=gene-LDO45_RS17235;Name=dkgB;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=LDO45_RS17235;old_locus_tag=BDI4_320086 NZ_CAJZAS010000186.1 Protein Homology CDS 91074 91880 . + 0 ID=cds-WP_223962682.1;Parent=gene-LDO45_RS17235;Dbxref=GenBank:WP_223962682.1;Name=WP_223962682.1;Ontology_term=GO:0047834;gbkey=CDS;gene=dkgB;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366975.1;locus_tag=LDO45_RS17235;product=2%2C5-didehydrogluconate reductase DkgB;protein_id=WP_223962682.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 91945 93060 . + . ID=gene-LDO45_RS17240;Name=LDO45_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17240;old_locus_tag=BDI4_320087 NZ_CAJZAS010000186.1 Protein Homology CDS 91945 93060 . + 0 ID=cds-WP_059528565.1;Parent=gene-LDO45_RS17240;Dbxref=GenBank:WP_059528565.1;Name=WP_059528565.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216325.1;locus_tag=LDO45_RS17240;product=alkene reductase;protein_id=WP_059528565.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 93081 94085 . + . ID=gene-LDO45_RS17245;Name=LDO45_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17245;old_locus_tag=BDI4_320088 NZ_CAJZAS010000186.1 Protein Homology CDS 93081 94085 . + 0 ID=cds-WP_223962683.1;Parent=gene-LDO45_RS17245;Dbxref=GenBank:WP_223962683.1;Name=WP_223962683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408755.1;locus_tag=LDO45_RS17245;product=aldo/keto reductase;protein_id=WP_223962683.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 94257 94775 . + . ID=gene-LDO45_RS17250;Name=LDO45_RS17250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17250;old_locus_tag=BDI4_320089 NZ_CAJZAS010000186.1 Protein Homology CDS 94257 94775 . + 0 ID=cds-WP_223962684.1;Parent=gene-LDO45_RS17250;Dbxref=GenBank:WP_223962684.1;Name=WP_223962684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493588.1;locus_tag=LDO45_RS17250;product=DUF3455 domain-containing protein;protein_id=WP_223962684.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 95401 96789 . + . ID=gene-LDO45_RS17255;Name=LDO45_RS17255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17255;old_locus_tag=BDI4_320093 NZ_CAJZAS010000186.1 Protein Homology CDS 95401 96789 . + 0 ID=cds-WP_059528588.1;Parent=gene-LDO45_RS17255;Dbxref=GenBank:WP_059528588.1;Name=WP_059528588.1;Ontology_term=GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757206.1;locus_tag=LDO45_RS17255;product=NCS2 family permease;protein_id=WP_059528588.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 96992 97585 . + . ID=gene-LDO45_RS17260;Name=LDO45_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17260;old_locus_tag=BDI4_320095 NZ_CAJZAS010000186.1 Protein Homology CDS 96992 97585 . + 0 ID=cds-WP_059528591.1;Parent=gene-LDO45_RS17260;Dbxref=GenBank:WP_059528591.1;Name=WP_059528591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482602.1;locus_tag=LDO45_RS17260;product=hypothetical protein;protein_id=WP_059528591.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 97823 98743 . + . ID=gene-LDO45_RS17265;Name=LDO45_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17265;old_locus_tag=BDI4_320096 NZ_CAJZAS010000186.1 Protein Homology CDS 97823 98743 . + 0 ID=cds-WP_059528594.1;Parent=gene-LDO45_RS17265;Dbxref=GenBank:WP_059528594.1;Name=WP_059528594.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090095.1;locus_tag=LDO45_RS17265;product=LysR family transcriptional regulator;protein_id=WP_059528594.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 98969 99751 . + . ID=gene-LDO45_RS17270;Name=LDO45_RS17270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17270;old_locus_tag=BDI4_320097 NZ_CAJZAS010000186.1 Protein Homology CDS 98969 99751 . + 0 ID=cds-WP_223962685.1;Parent=gene-LDO45_RS17270;Dbxref=GenBank:WP_223962685.1;Name=WP_223962685.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090096.1;locus_tag=LDO45_RS17270;product=ABC transporter substrate-binding protein;protein_id=WP_223962685.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 100010 101125 . + . ID=gene-LDO45_RS17275;Name=LDO45_RS17275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17275;old_locus_tag=BDI4_320098 NZ_CAJZAS010000186.1 Protein Homology CDS 100010 101125 . + 0 ID=cds-WP_223962686.1;Parent=gene-LDO45_RS17275;Dbxref=GenBank:WP_223962686.1;Name=WP_223962686.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331142.1;locus_tag=LDO45_RS17275;product=succinylglutamate desuccinylase/aspartoacylase family protein;protein_id=WP_223962686.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 101257 102063 . - . ID=gene-LDO45_RS17280;Name=LDO45_RS17280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17280;old_locus_tag=BDI4_320099 NZ_CAJZAS010000186.1 Protein Homology CDS 101257 102063 . - 0 ID=cds-WP_059689331.1;Parent=gene-LDO45_RS17280;Dbxref=GenBank:WP_059689331.1;Name=WP_059689331.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353840.1;locus_tag=LDO45_RS17280;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_059689331.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 102371 103531 . + . ID=gene-LDO45_RS17285;Name=LDO45_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17285;old_locus_tag=BDI4_320100 NZ_CAJZAS010000186.1 Protein Homology CDS 102371 103531 . + 0 ID=cds-WP_059528606.1;Parent=gene-LDO45_RS17285;Dbxref=GenBank:WP_059528606.1;Name=WP_059528606.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900901.1;locus_tag=LDO45_RS17285;product=porin;protein_id=WP_059528606.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 103753 104013 . + . ID=gene-LDO45_RS17290;Name=LDO45_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17290;old_locus_tag=BDI4_320101 NZ_CAJZAS010000186.1 Protein Homology CDS 103753 104013 . + 0 ID=cds-WP_059528608.1;Parent=gene-LDO45_RS17290;Dbxref=GenBank:WP_059528608.1;Name=WP_059528608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353838.1;locus_tag=LDO45_RS17290;product=DUF2866 domain-containing protein;protein_id=WP_059528608.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 104137 104520 . + . ID=gene-LDO45_RS17295;Name=LDO45_RS17295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17295;old_locus_tag=BDI4_320102 NZ_CAJZAS010000186.1 Protein Homology CDS 104137 104520 . + 0 ID=cds-WP_059528611.1;Parent=gene-LDO45_RS17295;Dbxref=GenBank:WP_059528611.1;Name=WP_059528611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754284.1;locus_tag=LDO45_RS17295;product=DUF6232 family protein;protein_id=WP_059528611.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 104592 104819 . + . ID=gene-LDO45_RS17300;Name=LDO45_RS17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17300;old_locus_tag=BDI4_320103 NZ_CAJZAS010000186.1 Protein Homology CDS 104592 104819 . + 0 ID=cds-WP_059528614.1;Parent=gene-LDO45_RS17300;Dbxref=GenBank:WP_059528614.1;Name=WP_059528614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339294.1;locus_tag=LDO45_RS17300;product=hypothetical protein;protein_id=WP_059528614.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 105060 107330 . + . ID=gene-LDO45_RS17305;Name=LDO45_RS17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17305;old_locus_tag=BDI4_320104 NZ_CAJZAS010000186.1 Protein Homology CDS 105060 107330 . + 0 ID=cds-WP_223962687.1;Parent=gene-LDO45_RS17305;Dbxref=GenBank:WP_223962687.1;Name=WP_223962687.1;Ontology_term=GO:0055085,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412953.1;locus_tag=LDO45_RS17305;product=TonB-dependent hemoglobin/transferrin/lactoferrin family receptor;protein_id=WP_223962687.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq gene 107380 108471 . + . ID=gene-LDO45_RS17310;Name=LDO45_RS17310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17310;old_locus_tag=BDI4_320105 NZ_CAJZAS010000186.1 Protein Homology CDS 107380 108471 . + 0 ID=cds-WP_223962689.1;Parent=gene-LDO45_RS17310;Dbxref=GenBank:WP_223962689.1;Name=WP_223962689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494176.1;locus_tag=LDO45_RS17310;product=hemin-degrading factor;protein_id=WP_223962689.1;transl_table=11 NZ_CAJZAS010000186.1 RefSeq pseudogene 108468 108630 . + . ID=gene-LDO45_RS17315;Name=LDO45_RS17315;end_range=108630,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS17315;partial=true;pseudo=true NZ_CAJZAS010000186.1 Protein Homology CDS 108468 108630 . + 0 ID=cds-LDO45_RS17315;Parent=gene-LDO45_RS17315;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=108630,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659725.1;locus_tag=LDO45_RS17315;partial=true;product=hemin ABC transporter substrate-binding protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000187.1 1 7681 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000187.1 RefSeq region 1 7681 . + . ID=NZ_CAJZAS010000187.1:1..7681;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_33 NZ_CAJZAS010000187.1 RefSeq gene 1 816 . + . ID=gene-LDO45_RS17320;Name=LDO45_RS17320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17320;old_locus_tag=BDI4_330001;partial=true;start_range=.,1 NZ_CAJZAS010000187.1 Protein Homology CDS 1 816 . + 0 ID=cds-WP_223962693.1;Parent=gene-LDO45_RS17320;Dbxref=GenBank:WP_223962693.1;Name=WP_223962693.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658462.1;locus_tag=LDO45_RS17320;partial=true;product=MFS transporter;protein_id=WP_223962693.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000187.1 RefSeq gene 880 2064 . - . ID=gene-LDO45_RS17325;Name=LDO45_RS17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17325;old_locus_tag=BDI4_330002 NZ_CAJZAS010000187.1 Protein Homology CDS 880 2064 . - 0 ID=cds-WP_223962695.1;Parent=gene-LDO45_RS17325;Dbxref=GenBank:WP_223962695.1;Name=WP_223962695.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725135.1;locus_tag=LDO45_RS17325;product=LysR family transcriptional regulator;protein_id=WP_223962695.1;transl_table=11 NZ_CAJZAS010000187.1 RefSeq gene 2089 2817 . - . ID=gene-LDO45_RS17330;Name=LDO45_RS17330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17330;old_locus_tag=BDI4_330003 NZ_CAJZAS010000187.1 Protein Homology CDS 2089 2817 . - 0 ID=cds-WP_059524874.1;Parent=gene-LDO45_RS17330;Dbxref=GenBank:WP_059524874.1;Name=WP_059524874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338429.1;locus_tag=LDO45_RS17330;product=aspartate/glutamate racemase family protein;protein_id=WP_059524874.1;transl_table=11 NZ_CAJZAS010000187.1 RefSeq gene 2840 4372 . - . ID=gene-LDO45_RS17335;Name=LDO45_RS17335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17335;old_locus_tag=BDI4_330004 NZ_CAJZAS010000187.1 Protein Homology CDS 2840 4372 . - 0 ID=cds-WP_223962697.1;Parent=gene-LDO45_RS17335;Dbxref=GenBank:WP_223962697.1;Name=WP_223962697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488619.1;locus_tag=LDO45_RS17335;product=NCS1 family nucleobase:cation symporter-1;protein_id=WP_223962697.1;transl_table=11 NZ_CAJZAS010000187.1 RefSeq gene 4609 4863 . + . ID=gene-LDO45_RS17340;Name=LDO45_RS17340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17340 NZ_CAJZAS010000187.1 Protein Homology CDS 4609 4863 . + 0 ID=cds-WP_059524876.1;Parent=gene-LDO45_RS17340;Dbxref=GenBank:WP_059524876.1;Name=WP_059524876.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762278.1;locus_tag=LDO45_RS17340;product=hypothetical protein;protein_id=WP_059524876.1;transl_table=11 NZ_CAJZAS010000187.1 RefSeq gene 4993 5541 . + . ID=gene-LDO45_RS17345;Name=LDO45_RS17345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17345;old_locus_tag=BDI4_330006 NZ_CAJZAS010000187.1 Protein Homology CDS 4993 5541 . + 0 ID=cds-WP_223962699.1;Parent=gene-LDO45_RS17345;Dbxref=GenBank:WP_223962699.1;Name=WP_223962699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416577.1;locus_tag=LDO45_RS17345;product=DUF3005 domain-containing protein;protein_id=WP_223962699.1;transl_table=11 NZ_CAJZAS010000187.1 RefSeq gene 5593 6357 . - . ID=gene-LDO45_RS17350;Name=LDO45_RS17350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17350;old_locus_tag=BDI4_330007 NZ_CAJZAS010000187.1 Protein Homology CDS 5593 6357 . - 0 ID=cds-WP_059524878.1;Parent=gene-LDO45_RS17350;Dbxref=GenBank:WP_059524878.1;Name=WP_059524878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754364.1;locus_tag=LDO45_RS17350;product=DUF4397 domain-containing protein;protein_id=WP_059524878.1;transl_table=11 NZ_CAJZAS010000187.1 RefSeq gene 6708 7040 . + . ID=gene-LDO45_RS17355;Name=LDO45_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17355;old_locus_tag=BDI4_330008 NZ_CAJZAS010000187.1 Protein Homology CDS 6708 7040 . + 0 ID=cds-WP_059524879.1;Parent=gene-LDO45_RS17355;Dbxref=GenBank:WP_059524879.1;Name=WP_059524879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548018.1;locus_tag=LDO45_RS17355;product=hypothetical protein;protein_id=WP_059524879.1;transl_table=11 NZ_CAJZAS010000187.1 RefSeq gene 7153 7681 . - . ID=gene-LDO45_RS17360;Name=LDO45_RS17360;end_range=7681,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17360;old_locus_tag=BDI4_330010;partial=true NZ_CAJZAS010000187.1 Protein Homology CDS 7153 7681 . - 1 ID=cds-WP_223962701.1;Parent=gene-LDO45_RS17360;Dbxref=GenBank:WP_223962701.1;Name=WP_223962701.1;Ontology_term=GO:0051287;end_range=7681,.;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899744.1;locus_tag=LDO45_RS17360;partial=true;product=NAD-binding protein;protein_id=WP_223962701.1;transl_table=11 ##sequence-region NZ_CAJZAS010000188.1 1 50676 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000188.1 RefSeq region 1 50676 . + . ID=NZ_CAJZAS010000188.1:1..50676;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_34 NZ_CAJZAS010000188.1 RefSeq pseudogene 1 154 . - . ID=gene-LDO45_RS17365;Name=LDO45_RS17365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS17365;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000188.1 Protein Homology CDS 1 154 . - 0 ID=cds-LDO45_RS17365;Parent=gene-LDO45_RS17365;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367076.1;locus_tag=LDO45_RS17365;partial=true;product=phage tail protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 263 1270 . - . ID=gene-LDO45_RS17370;Name=hpnA;gbkey=Gene;gene=hpnA;gene_biotype=protein_coding;locus_tag=LDO45_RS17370;old_locus_tag=BDI4_340001 NZ_CAJZAS010000188.1 Protein Homology CDS 263 1270 . - 0 ID=cds-WP_059528829.1;Parent=gene-LDO45_RS17370;Dbxref=GenBank:WP_059528829.1;Name=WP_059528829.1;Ontology_term=GO:0005975,GO:0016757;gbkey=CDS;gene=hpnA;go_function=glycosyltransferase activity|0016757||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255812.1;locus_tag=LDO45_RS17370;product=hopanoid-associated sugar epimerase;protein_id=WP_059528829.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq pseudogene 1475 1758 . + . ID=gene-LDO45_RS17375;Name=LDO45_RS17375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS17375;pseudo=true NZ_CAJZAS010000188.1 Protein Homology CDS 1475 1758 . + 0 ID=cds-LDO45_RS17375;Parent=gene-LDO45_RS17375;Note=frameshifted%3B too many ambiguous residues;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367074.1;locus_tag=LDO45_RS17375;product=acylphosphatase;pseudo=true;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 1771 2670 . + . ID=gene-LDO45_RS17380;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=LDO45_RS17380;old_locus_tag=BDI4_340003 NZ_CAJZAS010000188.1 Protein Homology CDS 1771 2670 . + 0 ID=cds-WP_223962703.1;Parent=gene-LDO45_RS17380;Dbxref=GenBank:WP_223962703.1;Name=WP_223962703.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480293.1;locus_tag=LDO45_RS17380;product=EamA family transporter RarD;protein_id=WP_223962703.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 3058 4182 . + . ID=gene-LDO45_RS17385;Name=LDO45_RS17385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17385;old_locus_tag=BDI4_340004 NZ_CAJZAS010000188.1 Protein Homology CDS 3058 4182 . + 0 ID=cds-WP_223962705.1;Parent=gene-LDO45_RS17385;Dbxref=GenBank:WP_223962705.1;Name=WP_223962705.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339217.1;locus_tag=LDO45_RS17385;product=OpgC domain-containing protein;protein_id=WP_223962705.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 4254 4460 . - . ID=gene-LDO45_RS17390;Name=LDO45_RS17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17390;old_locus_tag=BDI4_340005 NZ_CAJZAS010000188.1 Protein Homology CDS 4254 4460 . - 0 ID=cds-WP_059528816.1;Parent=gene-LDO45_RS17390;Dbxref=GenBank:WP_059528816.1;Name=WP_059528816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490170.1;locus_tag=LDO45_RS17390;product=hypothetical protein;protein_id=WP_059528816.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 4581 6104 . - . ID=gene-LDO45_RS17395;Name=LDO45_RS17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17395;old_locus_tag=BDI4_340006 NZ_CAJZAS010000188.1 Protein Homology CDS 4581 6104 . - 0 ID=cds-WP_059815193.1;Parent=gene-LDO45_RS17395;Dbxref=GenBank:WP_059815193.1;Name=WP_059815193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407878.1;locus_tag=LDO45_RS17395;product=peptide MFS transporter;protein_id=WP_059815193.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 6603 7184 . + . ID=gene-LDO45_RS17400;Name=LDO45_RS17400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17400;old_locus_tag=BDI4_340008 NZ_CAJZAS010000188.1 Protein Homology CDS 6603 7184 . + 0 ID=cds-WP_059448921.1;Parent=gene-LDO45_RS17400;Dbxref=GenBank:WP_059448921.1;Name=WP_059448921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900815.1;locus_tag=LDO45_RS17400;product=cupin domain-containing protein;protein_id=WP_059448921.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 7362 8975 . + . ID=gene-LDO45_RS17405;Name=LDO45_RS17405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17405;old_locus_tag=BDI4_340009 NZ_CAJZAS010000188.1 Protein Homology CDS 7362 8975 . + 0 ID=cds-WP_059528810.1;Parent=gene-LDO45_RS17405;Dbxref=GenBank:WP_059528810.1;Name=WP_059528810.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659809.1;locus_tag=LDO45_RS17405;product=peptide ABC transporter substrate-binding protein;protein_id=WP_059528810.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 8987 9925 . + . ID=gene-LDO45_RS17410;Name=LDO45_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17410;old_locus_tag=BDI4_340010 NZ_CAJZAS010000188.1 Protein Homology CDS 8987 9925 . + 0 ID=cds-WP_059528807.1;Parent=gene-LDO45_RS17410;Dbxref=GenBank:WP_059528807.1;Name=WP_059528807.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659808.1;locus_tag=LDO45_RS17410;product=ABC transporter permease subunit;protein_id=WP_059528807.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 9939 10841 . + . ID=gene-LDO45_RS17415;Name=LDO45_RS17415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17415;old_locus_tag=BDI4_340011 NZ_CAJZAS010000188.1 Protein Homology CDS 9939 10841 . + 0 ID=cds-WP_059528804.1;Parent=gene-LDO45_RS17415;Dbxref=GenBank:WP_059528804.1;Name=WP_059528804.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900818.1;locus_tag=LDO45_RS17415;product=ABC transporter permease;protein_id=WP_059528804.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 10843 11835 . + . ID=gene-LDO45_RS17420;Name=LDO45_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17420;old_locus_tag=BDI4_340012 NZ_CAJZAS010000188.1 Protein Homology CDS 10843 11835 . + 0 ID=cds-WP_059528801.1;Parent=gene-LDO45_RS17420;Dbxref=GenBank:WP_059528801.1;Name=WP_059528801.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353733.1;locus_tag=LDO45_RS17420;product=ABC transporter ATP-binding protein;protein_id=WP_059528801.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 11832 12854 . + . ID=gene-LDO45_RS17425;Name=LDO45_RS17425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17425;old_locus_tag=BDI4_340013 NZ_CAJZAS010000188.1 Protein Homology CDS 11832 12854 . + 0 ID=cds-WP_059528798.1;Parent=gene-LDO45_RS17425;Dbxref=GenBank:WP_059528798.1;Name=WP_059528798.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900820.1;locus_tag=LDO45_RS17425;product=ABC transporter ATP-binding protein;protein_id=WP_059528798.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 13014 14480 . + . ID=gene-LDO45_RS17430;Name=LDO45_RS17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17430;old_locus_tag=BDI4_340014 NZ_CAJZAS010000188.1 Protein Homology CDS 13014 14480 . + 0 ID=cds-WP_223962707.1;Parent=gene-LDO45_RS17430;Dbxref=GenBank:WP_223962707.1;Name=WP_223962707.1;Ontology_term=GO:0006811,GO:0015802,GO:0015288,GO:0009279,GO:0019867,GO:0046930;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,outer membrane|0019867||IEA,pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,basic amino acid transport|0015802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900821.1;locus_tag=LDO45_RS17430;product=OprD family porin;protein_id=WP_223962707.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 14547 15539 . - . ID=gene-LDO45_RS17435;Name=LDO45_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17435;old_locus_tag=BDI4_340016 NZ_CAJZAS010000188.1 Protein Homology CDS 14547 15539 . - 0 ID=cds-WP_059528794.1;Parent=gene-LDO45_RS17435;Dbxref=GenBank:WP_059528794.1;Name=WP_059528794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331030.1;locus_tag=LDO45_RS17435;product=DedA family protein/thiosulfate sulfurtransferase GlpE;protein_id=WP_059528794.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 15703 15972 . - . ID=gene-LDO45_RS17440;Name=LDO45_RS17440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17440;old_locus_tag=BDI4_340017 NZ_CAJZAS010000188.1 Protein Homology CDS 15703 15972 . - 0 ID=cds-WP_040138862.1;Parent=gene-LDO45_RS17440;Dbxref=GenBank:WP_040138862.1;Name=WP_040138862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480304.1;locus_tag=LDO45_RS17440;product=hypothetical protein;protein_id=WP_040138862.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq pseudogene 16218 16614 . - . ID=gene-LDO45_RS17445;Name=LDO45_RS17445;end_range=16614,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS17445;partial=true;pseudo=true;start_range=.,16218 NZ_CAJZAS010000188.1 Protein Homology CDS 16218 16614 . - 0 ID=cds-LDO45_RS17445;Parent=gene-LDO45_RS17445;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0016042,GO:0004629;end_range=16614,.;gbkey=CDS;go_function=phospholipase C activity|0004629||IEA;go_process=lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367063.1;locus_tag=LDO45_RS17445;partial=true;product=phospholipase domain-containing protein;pseudo=true;start_range=.,16218;transl_table=11 NZ_CAJZAS010000188.1 RefSeq pseudogene 16900 17059 . + . ID=gene-LDO45_RS17450;Name=LDO45_RS17450;end_range=17059,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS17450;partial=true;pseudo=true NZ_CAJZAS010000188.1 Protein Homology CDS 16900 17059 . + 0 ID=cds-LDO45_RS17450;Parent=gene-LDO45_RS17450;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=17059,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753641.1;locus_tag=LDO45_RS17450;partial=true;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 17385 18980 . + . ID=gene-LDO45_RS17455;Name=LDO45_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17455;old_locus_tag=BDI4_340020 NZ_CAJZAS010000188.1 Protein Homology CDS 17385 18980 . + 0 ID=cds-WP_223962709.1;Parent=gene-LDO45_RS17455;Dbxref=GenBank:WP_223962709.1;Name=WP_223962709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367061.1;locus_tag=LDO45_RS17455;product=thioredoxin family protein;protein_id=WP_223962709.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 19029 19280 . - . ID=gene-LDO45_RS17460;Name=LDO45_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17460;old_locus_tag=BDI4_340021 NZ_CAJZAS010000188.1 Protein Homology CDS 19029 19280 . - 0 ID=cds-WP_223962711.1;Parent=gene-LDO45_RS17460;Dbxref=GenBank:WP_223962711.1;Name=WP_223962711.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881039.1;locus_tag=LDO45_RS17460;product=DUF4148 domain-containing protein;protein_id=WP_223962711.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 19736 21139 . - . ID=gene-LDO45_RS17465;Name=LDO45_RS17465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17465;old_locus_tag=BDI4_340023 NZ_CAJZAS010000188.1 Protein Homology CDS 19736 21139 . - 0 ID=cds-WP_059815171.1;Parent=gene-LDO45_RS17465;Dbxref=GenBank:WP_059815171.1;Name=WP_059815171.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757738.1;locus_tag=LDO45_RS17465;product=GntP family permease;protein_id=WP_059815171.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 21467 22954 . + . ID=gene-LDO45_RS17470;Name=LDO45_RS17470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17470;old_locus_tag=BDI4_340024 NZ_CAJZAS010000188.1 Protein Homology CDS 21467 22954 . + 0 ID=cds-WP_223962713.1;Parent=gene-LDO45_RS17470;Dbxref=GenBank:WP_223962713.1;Name=WP_223962713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548900.1;locus_tag=LDO45_RS17470;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_223962713.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 23021 23548 . + . ID=gene-LDO45_RS17475;Name=LDO45_RS17475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17475;old_locus_tag=BDI4_340025 NZ_CAJZAS010000188.1 Protein Homology CDS 23021 23548 . + 0 ID=cds-WP_223962715.1;Parent=gene-LDO45_RS17475;Dbxref=GenBank:WP_223962715.1;Name=WP_223962715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397411.1;locus_tag=LDO45_RS17475;product=BON domain-containing protein;protein_id=WP_223962715.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 23610 23894 . + . ID=gene-LDO45_RS17480;Name=LDO45_RS17480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17480 NZ_CAJZAS010000188.1 Protein Homology CDS 23610 23894 . + 0 ID=cds-WP_223962717.1;Parent=gene-LDO45_RS17480;Dbxref=GenBank:WP_223962717.1;Name=WP_223962717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493616.1;locus_tag=LDO45_RS17480;product=hypothetical protein;protein_id=WP_223962717.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 23998 24294 . + . ID=gene-LDO45_RS17485;Name=LDO45_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17485;old_locus_tag=BDI4_340026 NZ_CAJZAS010000188.1 Protein Homology CDS 23998 24294 . + 0 ID=cds-WP_059467298.1;Parent=gene-LDO45_RS17485;Dbxref=GenBank:WP_059467298.1;Name=WP_059467298.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010110637.1;locus_tag=LDO45_RS17485;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_059467298.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 24865 27222 . + . ID=gene-LDO45_RS17490;Name=LDO45_RS17490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17490;old_locus_tag=BDI4_340027 NZ_CAJZAS010000188.1 Protein Homology CDS 24865 27222 . + 0 ID=cds-WP_223962718.1;Parent=gene-LDO45_RS17490;Dbxref=GenBank:WP_223962718.1;Name=WP_223962718.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724165.1;locus_tag=LDO45_RS17490;product=GNAT family N-acetyltransferase;protein_id=WP_223962718.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 27905 28456 . - . ID=gene-LDO45_RS17495;Name=LDO45_RS17495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17495;old_locus_tag=BDI4_340028 NZ_CAJZAS010000188.1 Protein Homology CDS 27905 28456 . - 0 ID=cds-WP_059528779.1;Parent=gene-LDO45_RS17495;Dbxref=GenBank:WP_059528779.1;Name=WP_059528779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004266659.1;locus_tag=LDO45_RS17495;product=hypothetical protein;protein_id=WP_059528779.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 28665 29489 . - . ID=gene-LDO45_RS17500;Name=LDO45_RS17500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17500;old_locus_tag=BDI4_340030 NZ_CAJZAS010000188.1 Protein Homology CDS 28665 29489 . - 0 ID=cds-WP_223962720.1;Parent=gene-LDO45_RS17500;Dbxref=GenBank:WP_223962720.1;Name=WP_223962720.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480315.1;locus_tag=LDO45_RS17500;product=IclR family transcriptional regulator;protein_id=WP_223962720.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 30150 30998 . + . ID=gene-LDO45_RS17505;Name=LDO45_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17505;old_locus_tag=BDI4_340031 NZ_CAJZAS010000188.1 Protein Homology CDS 30150 30998 . + 0 ID=cds-WP_223962722.1;Parent=gene-LDO45_RS17505;Dbxref=GenBank:WP_223962722.1;Name=WP_223962722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353752.1;locus_tag=LDO45_RS17505;product=ureidoglycolate lyase;protein_id=WP_223962722.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 31154 31537 . - . ID=gene-LDO45_RS17510;Name=LDO45_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17510;old_locus_tag=BDI4_340032 NZ_CAJZAS010000188.1 Protein Homology CDS 31154 31537 . - 0 ID=cds-WP_059689285.1;Parent=gene-LDO45_RS17510;Dbxref=GenBank:WP_059689285.1;Name=WP_059689285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659789.1;locus_tag=LDO45_RS17510;product=VOC family protein;protein_id=WP_059689285.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 31792 32439 . + . ID=gene-LDO45_RS17515;Name=LDO45_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17515;old_locus_tag=BDI4_340034 NZ_CAJZAS010000188.1 Protein Homology CDS 31792 32439 . + 0 ID=cds-WP_223962724.1;Parent=gene-LDO45_RS17515;Dbxref=GenBank:WP_223962724.1;Name=WP_223962724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548910.1;locus_tag=LDO45_RS17515;product=ABATE domain-containing protein;protein_id=WP_223962724.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 32490 34472 . - . ID=gene-LDO45_RS17520;Name=prpR;gbkey=Gene;gene=prpR;gene_biotype=protein_coding;locus_tag=LDO45_RS17520;old_locus_tag=BDI4_340035 NZ_CAJZAS010000188.1 Protein Homology CDS 32490 34472 . - 0 ID=cds-WP_223962726.1;Parent=gene-LDO45_RS17520;Dbxref=GenBank:WP_223962726.1;Name=WP_223962726.1;Ontology_term=GO:0000160,GO:0006355,GO:0019629,GO:0000156,GO:0003677,GO:0005524,GO:0008134,GO:0043565,GO:0005737;gbkey=CDS;gene=prpR;go_component=cytoplasm|0005737||IEA;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481672.1;locus_tag=LDO45_RS17520;product=propionate catabolism operon regulatory protein PrpR;protein_id=WP_223962726.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 34643 35536 . + . ID=gene-LDO45_RS17525;Name=prpB;gbkey=Gene;gene=prpB;gene_biotype=protein_coding;locus_tag=LDO45_RS17525;old_locus_tag=BDI4_340036 NZ_CAJZAS010000188.1 Protein Homology CDS 34643 35536 . + 0 ID=cds-WP_044845010.1;Parent=gene-LDO45_RS17525;Dbxref=GenBank:WP_044845010.1;Name=WP_044845010.1;Ontology_term=GO:0019629,GO:0046421;gbkey=CDS;gene=prpB;go_function=methylisocitrate lyase activity|0046421||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481649.1;locus_tag=LDO45_RS17525;product=methylisocitrate lyase;protein_id=WP_044845010.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 35652 36824 . + . ID=gene-LDO45_RS17530;Name=prpC;gbkey=Gene;gene=prpC;gene_biotype=protein_coding;locus_tag=LDO45_RS17530;old_locus_tag=BDI4_340037 NZ_CAJZAS010000188.1 Protein Homology CDS 35652 36824 . + 0 ID=cds-WP_059448941.1;Parent=gene-LDO45_RS17530;Dbxref=GenBank:WP_059448941.1;Name=WP_059448941.1;Ontology_term=GO:0050440;gbkey=CDS;gene=prpC;go_function=2-methylcitrate synthase activity|0050440||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757728.1;locus_tag=LDO45_RS17530;product=2-methylcitrate synthase;protein_id=WP_059448941.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 36907 39501 . + . ID=gene-LDO45_RS17535;Name=acnD;gbkey=Gene;gene=acnD;gene_biotype=protein_coding;locus_tag=LDO45_RS17535;old_locus_tag=BDI4_340038 NZ_CAJZAS010000188.1 Protein Homology CDS 36907 39501 . + 0 ID=cds-WP_223962728.1;Parent=gene-LDO45_RS17535;Dbxref=GenBank:WP_223962728.1;Name=WP_223962728.1;Ontology_term=GO:0019679,GO:0047456;gbkey=CDS;gene=acnD;go_function=2-methylisocitrate dehydratase activity|0047456||IEA;go_process=propionate metabolic process%2C methylcitrate cycle|0019679||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009981139.1;locus_tag=LDO45_RS17535;product=Fe/S-dependent 2-methylisocitrate dehydratase AcnD;protein_id=WP_223962728.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 39528 40718 . + . ID=gene-LDO45_RS17540;Name=prpF;gbkey=Gene;gene=prpF;gene_biotype=protein_coding;locus_tag=LDO45_RS17540;old_locus_tag=BDI4_340039 NZ_CAJZAS010000188.1 Protein Homology CDS 39528 40718 . + 0 ID=cds-WP_223962731.1;Parent=gene-LDO45_RS17540;Dbxref=GenBank:WP_223962731.1;Name=WP_223962731.1;Ontology_term=GO:0019629,GO:0016853;gbkey=CDS;gene=prpF;go_function=isomerase activity|0016853||IEA;go_process=propionate catabolic process%2C 2-methylcitrate cycle|0019629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090131.1;locus_tag=LDO45_RS17540;product=2-methylaconitate cis-trans isomerase PrpF;protein_id=WP_223962731.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 40892 41944 . + . ID=gene-LDO45_RS17545;Name=LDO45_RS17545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17545;old_locus_tag=BDI4_340041 NZ_CAJZAS010000188.1 Protein Homology CDS 40892 41944 . + 0 ID=cds-WP_223962733.1;Parent=gene-LDO45_RS17545;Dbxref=GenBank:WP_223962733.1;Name=WP_223962733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494362.1;locus_tag=LDO45_RS17545;product=CaiB/BaiF CoA-transferase family protein;protein_id=WP_223962733.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 42008 42451 . - . ID=gene-LDO45_RS17550;Name=LDO45_RS17550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17550;old_locus_tag=BDI4_340042 NZ_CAJZAS010000188.1 Protein Homology CDS 42008 42451 . - 0 ID=cds-WP_059467287.1;Parent=gene-LDO45_RS17550;Dbxref=GenBank:WP_059467287.1;Name=WP_059467287.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900849.1;locus_tag=LDO45_RS17550;product=PaaI family thioesterase;protein_id=WP_059467287.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq pseudogene 42724 43842 . + . ID=gene-LDO45_RS17555;Name=LDO45_RS17555;end_range=43842,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS17555;old_locus_tag=BDI4_340043;partial=true;pseudo=true NZ_CAJZAS010000188.1 Protein Homology CDS 42724 43842 . + 0 ID=cds-LDO45_RS17555;Parent=gene-LDO45_RS17555;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006935,GO:0007165;end_range=43842,.;gbkey=CDS;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548924.1;locus_tag=LDO45_RS17555;partial=true;product=Tar ligand binding domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 44207 44416 . + . ID=gene-LDO45_RS17560;Name=LDO45_RS17560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17560;old_locus_tag=BDI4_340044 NZ_CAJZAS010000188.1 Protein Homology CDS 44207 44416 . + 0 ID=cds-WP_223962735.1;Parent=gene-LDO45_RS17560;Dbxref=GenBank:WP_223962735.1;Name=WP_223962735.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF017717.5;locus_tag=LDO45_RS17560;product=AlpA family transcriptional regulator;protein_id=WP_223962735.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 44717 44929 . + . ID=gene-LDO45_RS17565;Name=LDO45_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17565;old_locus_tag=BDI4_340045 NZ_CAJZAS010000188.1 GeneMarkS-2+ CDS 44717 44929 . + 0 ID=cds-WP_223962737.1;Parent=gene-LDO45_RS17565;Dbxref=GenBank:WP_223962737.1;Name=WP_223962737.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS17565;product=hypothetical protein;protein_id=WP_223962737.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 45046 45342 . + . ID=gene-LDO45_RS17570;Name=LDO45_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17570;old_locus_tag=BDI4_340047 NZ_CAJZAS010000188.1 GeneMarkS-2+ CDS 45046 45342 . + 0 ID=cds-WP_223962739.1;Parent=gene-LDO45_RS17570;Dbxref=GenBank:WP_223962739.1;Name=WP_223962739.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS17570;product=hypothetical protein;protein_id=WP_223962739.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 45402 45692 . - . ID=gene-LDO45_RS17575;Name=LDO45_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17575;old_locus_tag=BDI4_340048 NZ_CAJZAS010000188.1 Protein Homology CDS 45402 45692 . - 0 ID=cds-WP_223962741.1;Parent=gene-LDO45_RS17575;Dbxref=GenBank:WP_223962741.1;Name=WP_223962741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481154.1;locus_tag=LDO45_RS17575;product=H-NS histone family protein;protein_id=WP_223962741.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 45799 46392 . - . ID=gene-LDO45_RS17580;Name=LDO45_RS17580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17580;old_locus_tag=BDI4_340050 NZ_CAJZAS010000188.1 Protein Homology CDS 45799 46392 . - 0 ID=cds-WP_223962743.1;Parent=gene-LDO45_RS17580;Dbxref=GenBank:WP_223962743.1;Name=WP_223962743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352372.1;locus_tag=LDO45_RS17580;product=lipase;protein_id=WP_223962743.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 46743 47030 . - . ID=gene-LDO45_RS17585;Name=LDO45_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17585;old_locus_tag=BDI4_340052 NZ_CAJZAS010000188.1 GeneMarkS-2+ CDS 46743 47030 . - 0 ID=cds-WP_223962745.1;Parent=gene-LDO45_RS17585;Dbxref=GenBank:WP_223962745.1;Name=WP_223962745.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS17585;product=hypothetical protein;protein_id=WP_223962745.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 47042 47683 . - . ID=gene-LDO45_RS17590;Name=LDO45_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17590;old_locus_tag=BDI4_340053 NZ_CAJZAS010000188.1 Protein Homology CDS 47042 47683 . - 0 ID=cds-WP_223962747.1;Parent=gene-LDO45_RS17590;Dbxref=GenBank:WP_223962747.1;Name=WP_223962747.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013954.5;locus_tag=LDO45_RS17590;product=glycoside hydrolase family 73 protein;protein_id=WP_223962747.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 47673 47924 . - . ID=gene-LDO45_RS17595;Name=LDO45_RS17595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17595;old_locus_tag=BDI4_340054 NZ_CAJZAS010000188.1 GeneMarkS-2+ CDS 47673 47924 . - 0 ID=cds-WP_223962748.1;Parent=gene-LDO45_RS17595;Dbxref=GenBank:WP_223962748.1;Name=WP_223962748.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS17595;product=hypothetical protein;protein_id=WP_223962748.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 47921 48457 . - . ID=gene-LDO45_RS17600;Name=LDO45_RS17600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17600;old_locus_tag=BDI4_340055 NZ_CAJZAS010000188.1 GeneMarkS-2+ CDS 47921 48457 . - 0 ID=cds-WP_223962750.1;Parent=gene-LDO45_RS17600;Dbxref=GenBank:WP_223962750.1;Name=WP_223962750.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS17600;product=hypothetical protein;protein_id=WP_223962750.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 48468 48875 . - . ID=gene-LDO45_RS17605;Name=LDO45_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17605;old_locus_tag=BDI4_340056 NZ_CAJZAS010000188.1 GeneMarkS-2+ CDS 48468 48875 . - 0 ID=cds-WP_223962752.1;Parent=gene-LDO45_RS17605;Dbxref=GenBank:WP_223962752.1;Name=WP_223962752.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS17605;product=hypothetical protein;protein_id=WP_223962752.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 48987 50003 . - . ID=gene-LDO45_RS17610;Name=LDO45_RS17610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17610;old_locus_tag=BDI4_340057 NZ_CAJZAS010000188.1 GeneMarkS-2+ CDS 48987 50003 . - 0 ID=cds-WP_223962754.1;Parent=gene-LDO45_RS17610;Dbxref=GenBank:WP_223962754.1;Name=WP_223962754.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS17610;product=hypothetical protein;protein_id=WP_223962754.1;transl_table=11 NZ_CAJZAS010000188.1 RefSeq gene 50010 50552 . - . ID=gene-LDO45_RS17615;Name=LDO45_RS17615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17615;old_locus_tag=BDI4_340058 NZ_CAJZAS010000188.1 GeneMarkS-2+ CDS 50010 50552 . - 0 ID=cds-WP_223962756.1;Parent=gene-LDO45_RS17615;Dbxref=GenBank:WP_223962756.1;Name=WP_223962756.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS17615;product=hypothetical protein;protein_id=WP_223962756.1;transl_table=11 ##sequence-region NZ_CAJZAS010000189.1 1 91211 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000189.1 RefSeq region 1 91211 . + . ID=NZ_CAJZAS010000189.1:1..91211;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_35 NZ_CAJZAS010000189.1 RefSeq gene 395 2470 . + . ID=gene-LDO45_RS17620;Name=LDO45_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17620;old_locus_tag=BDI4_350001 NZ_CAJZAS010000189.1 Protein Homology CDS 395 2470 . + 0 ID=cds-WP_223962759.1;Parent=gene-LDO45_RS17620;Dbxref=GenBank:WP_223962759.1;Name=WP_223962759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655882.1;locus_tag=LDO45_RS17620;product=molybdopterin-dependent oxidoreductase;protein_id=WP_223962759.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 2607 4280 . + . ID=gene-LDO45_RS17625;Name=LDO45_RS17625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17625;old_locus_tag=BDI4_350002 NZ_CAJZAS010000189.1 Protein Homology CDS 2607 4280 . + 0 ID=cds-WP_223962761.1;Parent=gene-LDO45_RS17625;Dbxref=GenBank:WP_223962761.1;Name=WP_223962761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898193.1;locus_tag=LDO45_RS17625;product=long-chain fatty acid--CoA ligase;protein_id=WP_223962761.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 4614 5771 . - . ID=gene-LDO45_RS17630;Name=LDO45_RS17630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17630;old_locus_tag=BDI4_350003 NZ_CAJZAS010000189.1 Protein Homology CDS 4614 5771 . - 0 ID=cds-WP_059535150.1;Parent=gene-LDO45_RS17630;Dbxref=GenBank:WP_059535150.1;Name=WP_059535150.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195141.1;locus_tag=LDO45_RS17630;product=porin;protein_id=WP_059535150.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 6049 6675 . + . ID=gene-LDO45_RS17635;Name=coq7;gbkey=Gene;gene=coq7;gene_biotype=protein_coding;locus_tag=LDO45_RS17635;old_locus_tag=BDI4_350004 NZ_CAJZAS010000189.1 Protein Homology CDS 6049 6675 . + 0 ID=cds-WP_223962763.1;Parent=gene-LDO45_RS17635;Dbxref=GenBank:WP_223962763.1;Name=WP_223962763.1;Ontology_term=GO:0006744,GO:0004497;gbkey=CDS;gene=coq7;go_function=monooxygenase activity|0004497||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106632.1;locus_tag=LDO45_RS17635;product=2-polyprenyl-3-methyl-6-methoxy-1%2C4-benzoquinone monooxygenase;protein_id=WP_223962763.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 7063 7491 . + . ID=gene-LDO45_RS17640;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=LDO45_RS17640;old_locus_tag=BDI4_350005 NZ_CAJZAS010000189.1 Protein Homology CDS 7063 7491 . + 0 ID=cds-WP_006400450.1;Parent=gene-LDO45_RS17640;Dbxref=GenBank:WP_006400450.1;Name=WP_006400450.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255554.1;locus_tag=LDO45_RS17640;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_006400450.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 7515 8456 . + . ID=gene-LDO45_RS17645;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=LDO45_RS17645;old_locus_tag=BDI4_350006 NZ_CAJZAS010000189.1 Protein Homology CDS 7515 8456 . + 0 ID=cds-WP_059535156.1;Parent=gene-LDO45_RS17645;Dbxref=GenBank:WP_059535156.1;Name=WP_059535156.1;Ontology_term=GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350832.1;locus_tag=LDO45_RS17645;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_059535156.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 8453 8794 . + . ID=gene-LDO45_RS17650;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=LDO45_RS17650;old_locus_tag=BDI4_350007 NZ_CAJZAS010000189.1 Protein Homology CDS 8453 8794 . + 0 ID=cds-WP_059535158.1;Parent=gene-LDO45_RS17650;Dbxref=GenBank:WP_059535158.1;Name=WP_059535158.1;Ontology_term=GO:0000910,GO:0016020;gbkey=CDS;gene=ftsL;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527786.1;locus_tag=LDO45_RS17650;product=cell division protein FtsL;protein_id=WP_059535158.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 8791 10638 . + . ID=gene-LDO45_RS17655;Name=LDO45_RS17655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17655;old_locus_tag=BDI4_350009 NZ_CAJZAS010000189.1 Protein Homology CDS 8791 10638 . + 0 ID=cds-WP_223962765.1;Parent=gene-LDO45_RS17655;Dbxref=GenBank:WP_223962765.1;Name=WP_223962765.1;Ontology_term=GO:0009252,GO:0008658,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532007.1;locus_tag=LDO45_RS17655;product=penicillin-binding protein 2;protein_id=WP_223962765.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 10635 12173 . + . ID=gene-LDO45_RS17660;Name=LDO45_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17660;old_locus_tag=BDI4_350010 NZ_CAJZAS010000189.1 Protein Homology CDS 10635 12173 . + 0 ID=cds-WP_059688961.1;Parent=gene-LDO45_RS17660;Dbxref=GenBank:WP_059688961.1;Name=WP_059688961.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602111.1;locus_tag=LDO45_RS17660;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_059688961.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 12170 13576 . + . ID=gene-LDO45_RS17665;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=LDO45_RS17665;old_locus_tag=BDI4_350011 NZ_CAJZAS010000189.1 Protein Homology CDS 12170 13576 . + 0 ID=cds-WP_223962766.1;Parent=gene-LDO45_RS17665;Dbxref=GenBank:WP_223962766.1;Name=WP_223962766.1;Ontology_term=GO:0009252,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333460.1;locus_tag=LDO45_RS17665;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_223962766.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 13593 14762 . + . ID=gene-LDO45_RS17670;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=LDO45_RS17670;old_locus_tag=BDI4_350012 NZ_CAJZAS010000189.1 Protein Homology CDS 13593 14762 . + 0 ID=cds-WP_059451891.1;Parent=gene-LDO45_RS17670;Dbxref=GenBank:WP_059451891.1;Name=WP_059451891.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477019.1;locus_tag=LDO45_RS17670;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_059451891.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 14791 16302 . + . ID=gene-LDO45_RS17675;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=LDO45_RS17675;old_locus_tag=BDI4_350013 NZ_CAJZAS010000189.1 Protein Homology CDS 14791 16302 . + 0 ID=cds-WP_223962767.1;Parent=gene-LDO45_RS17675;Dbxref=GenBank:WP_223962767.1;Name=WP_223962767.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544499.1;locus_tag=LDO45_RS17675;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_223962767.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 16299 17582 . + . ID=gene-LDO45_RS17680;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=LDO45_RS17680;old_locus_tag=BDI4_350014 NZ_CAJZAS010000189.1 Protein Homology CDS 16299 17582 . + 0 ID=cds-WP_059465312.1;Parent=gene-LDO45_RS17680;Dbxref=GenBank:WP_059465312.1;Name=WP_059465312.1;Ontology_term=GO:0009252,GO:0051301,GO:0016020;gbkey=CDS;gene=ftsW;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600547.1;locus_tag=LDO45_RS17680;product=putative lipid II flippase FtsW;protein_id=WP_059465312.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 17579 18682 . + . ID=gene-LDO45_RS17685;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=LDO45_RS17685;old_locus_tag=BDI4_350015 NZ_CAJZAS010000189.1 Protein Homology CDS 17579 18682 . + 0 ID=cds-WP_223962768.1;Parent=gene-LDO45_RS17685;Dbxref=GenBank:WP_223962768.1;Name=WP_223962768.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004541310.1;locus_tag=LDO45_RS17685;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_223962768.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 18679 20076 . + . ID=gene-LDO45_RS17690;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=LDO45_RS17690;old_locus_tag=BDI4_350016 NZ_CAJZAS010000189.1 Protein Homology CDS 18679 20076 . + 0 ID=cds-WP_059688958.1;Parent=gene-LDO45_RS17690;Dbxref=GenBank:WP_059688958.1;Name=WP_059688958.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091239.1;locus_tag=LDO45_RS17690;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_059688958.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 20078 21019 . + . ID=gene-LDO45_RS17695;Name=LDO45_RS17695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17695;old_locus_tag=BDI4_350017 NZ_CAJZAS010000189.1 Protein Homology CDS 20078 21019 . + 0 ID=cds-WP_059535171.1;Parent=gene-LDO45_RS17695;Dbxref=GenBank:WP_059535171.1;Name=WP_059535171.1;Ontology_term=GO:0009252,GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011489915.1;locus_tag=LDO45_RS17695;product=D-alanine--D-alanine ligase;protein_id=WP_059535171.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 21039 21791 . + . ID=gene-LDO45_RS17700;Name=LDO45_RS17700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17700;old_locus_tag=BDI4_350018 NZ_CAJZAS010000189.1 Protein Homology CDS 21039 21791 . + 0 ID=cds-WP_223962769.1;Parent=gene-LDO45_RS17700;Dbxref=GenBank:WP_223962769.1;Name=WP_223962769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522020.1;locus_tag=LDO45_RS17700;product=cell division protein FtsQ/DivIB;protein_id=WP_223962769.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 21818 23050 . + . ID=gene-LDO45_RS17705;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=LDO45_RS17705;old_locus_tag=BDI4_350019 NZ_CAJZAS010000189.1 Protein Homology CDS 21818 23050 . + 0 ID=cds-WP_006752447.1;Parent=gene-LDO45_RS17705;Dbxref=GenBank:WP_006752447.1;Name=WP_006752447.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898179.1;locus_tag=LDO45_RS17705;product=cell division protein FtsA;protein_id=WP_006752447.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 23162 24358 . + . ID=gene-LDO45_RS17710;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=LDO45_RS17710;old_locus_tag=BDI4_350020 NZ_CAJZAS010000189.1 Protein Homology CDS 23162 24358 . + 0 ID=cds-WP_011883181.1;Parent=gene-LDO45_RS17710;Dbxref=GenBank:WP_011883181.1;Name=WP_011883181.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020071225.1;locus_tag=LDO45_RS17710;product=cell division protein FtsZ;protein_id=WP_011883181.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 24559 25065 . + . ID=gene-LDO45_RS17715;Name=LDO45_RS17715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17715;old_locus_tag=BDI4_350021 NZ_CAJZAS010000189.1 Protein Homology CDS 24559 25065 . + 0 ID=cds-WP_059535173.1;Parent=gene-LDO45_RS17715;Dbxref=GenBank:WP_059535173.1;Name=WP_059535173.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492974.1;locus_tag=LDO45_RS17715;product=peroxiredoxin;protein_id=WP_059535173.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 25306 26223 . + . ID=gene-LDO45_RS17720;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=LDO45_RS17720;old_locus_tag=BDI4_350023 NZ_CAJZAS010000189.1 Protein Homology CDS 25306 26223 . + 0 ID=cds-WP_059535496.1;Parent=gene-LDO45_RS17720;Dbxref=GenBank:WP_059535496.1;Name=WP_059535496.1;Ontology_term=GO:0009245,GO:0008759;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity|0008759||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106607.1;locus_tag=LDO45_RS17720;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_059535496.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 26306 26785 . - . ID=gene-LDO45_RS17725;Name=LDO45_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17725;old_locus_tag=BDI4_350024 NZ_CAJZAS010000189.1 Protein Homology CDS 26306 26785 . - 0 ID=cds-WP_059535175.1;Parent=gene-LDO45_RS17725;Dbxref=GenBank:WP_059535175.1;Name=WP_059535175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883184.1;locus_tag=LDO45_RS17725;product=DUF721 domain-containing protein;protein_id=WP_059535175.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 27053 29851 . + . ID=gene-LDO45_RS17730;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=LDO45_RS17730;old_locus_tag=BDI4_350025 NZ_CAJZAS010000189.1 Protein Homology CDS 27053 29851 . + 0 ID=cds-WP_059535177.1;Parent=gene-LDO45_RS17730;Dbxref=GenBank:WP_059535177.1;Name=WP_059535177.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544506.1;locus_tag=LDO45_RS17730;product=preprotein translocase subunit SecA;protein_id=WP_059535177.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 29995 31236 . + . ID=gene-LDO45_RS17735;Name=argJ;gbkey=Gene;gene=argJ;gene_biotype=protein_coding;locus_tag=LDO45_RS17735;old_locus_tag=BDI4_350026 NZ_CAJZAS010000189.1 Protein Homology CDS 29995 31236 . + 0 ID=cds-WP_223962770.1;Parent=gene-LDO45_RS17735;Dbxref=GenBank:WP_223962770.1;Name=WP_223962770.1;Ontology_term=GO:0006526,GO:0004358;gbkey=CDS;gene=argJ;go_function=glutamate N-acetyltransferase activity|0004358||IEA;go_process=arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333474.1;locus_tag=LDO45_RS17735;product=bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ;protein_id=WP_223962770.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 31256 32125 . + . ID=gene-LDO45_RS17740;Name=LDO45_RS17740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17740;old_locus_tag=BDI4_350027 NZ_CAJZAS010000189.1 Protein Homology CDS 31256 32125 . + 0 ID=cds-WP_059688955.1;Parent=gene-LDO45_RS17740;Dbxref=GenBank:WP_059688955.1;Name=WP_059688955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350849.1;locus_tag=LDO45_RS17740;product=ATP-binding protein;protein_id=WP_059688955.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 32122 32565 . + . ID=gene-LDO45_RS17745;Name=LDO45_RS17745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17745;old_locus_tag=BDI4_350028 NZ_CAJZAS010000189.1 Protein Homology CDS 32122 32565 . + 0 ID=cds-WP_059535183.1;Parent=gene-LDO45_RS17745;Dbxref=GenBank:WP_059535183.1;Name=WP_059535183.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487137.1;locus_tag=LDO45_RS17745;product=NUDIX domain-containing protein;protein_id=WP_059535183.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 32627 32827 . - . ID=gene-LDO45_RS17750;Name=LDO45_RS17750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17750;old_locus_tag=BDI4_350029 NZ_CAJZAS010000189.1 Protein Homology CDS 32627 32827 . - 0 ID=cds-WP_039317342.1;Parent=gene-LDO45_RS17750;Dbxref=GenBank:WP_039317342.1;Name=WP_039317342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544509.1;locus_tag=LDO45_RS17750;product=DNA gyrase inhibitor YacG;protein_id=WP_039317342.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 32856 33611 . - . ID=gene-LDO45_RS17755;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=LDO45_RS17755;old_locus_tag=BDI4_350030 NZ_CAJZAS010000189.1 Protein Homology CDS 32856 33611 . - 0 ID=cds-WP_059535184.1;Parent=gene-LDO45_RS17755;Dbxref=GenBank:WP_059535184.1;Name=WP_059535184.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756831.1;locus_tag=LDO45_RS17755;product=cell division protein ZapD;protein_id=WP_059535184.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 33721 34329 . - . ID=gene-LDO45_RS17760;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=LDO45_RS17760;old_locus_tag=BDI4_350031 NZ_CAJZAS010000189.1 Protein Homology CDS 33721 34329 . - 0 ID=cds-WP_223962771.1;Parent=gene-LDO45_RS17760;Dbxref=GenBank:WP_223962771.1;Name=WP_223962771.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487123.1;locus_tag=LDO45_RS17760;product=dephospho-CoA kinase;protein_id=WP_223962771.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 34414 35325 . - . ID=gene-LDO45_RS17765;Name=LDO45_RS17765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17765;old_locus_tag=BDI4_350032 NZ_CAJZAS010000189.1 Protein Homology CDS 34414 35325 . - 0 ID=cds-WP_223962773.1;Parent=gene-LDO45_RS17765;Dbxref=GenBank:WP_223962773.1;Name=WP_223962773.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214178.1;locus_tag=LDO45_RS17765;product=A24 family peptidase;protein_id=WP_223962773.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 35371 36585 . - . ID=gene-LDO45_RS17770;Name=LDO45_RS17770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17770;old_locus_tag=BDI4_350033 NZ_CAJZAS010000189.1 Protein Homology CDS 35371 36585 . - 0 ID=cds-WP_223962775.1;Parent=gene-LDO45_RS17770;Dbxref=GenBank:WP_223962775.1;Name=WP_223962775.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655903.1;locus_tag=LDO45_RS17770;product=type II secretion system F family protein;protein_id=WP_223962775.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 36582 37859 . - . ID=gene-LDO45_RS17775;Name=LDO45_RS17775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17775;old_locus_tag=BDI4_350034 NZ_CAJZAS010000189.1 Protein Homology CDS 36582 37859 . - 0 ID=cds-WP_223962777.1;Parent=gene-LDO45_RS17775;Dbxref=GenBank:WP_223962777.1;Name=WP_223962777.1;Ontology_term=GO:0009306,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477002.1;locus_tag=LDO45_RS17775;product=GspE/PulE family protein;protein_id=WP_223962777.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 37942 39228 . - . ID=gene-LDO45_RS17780;Name=LDO45_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17780;old_locus_tag=BDI4_350035 NZ_CAJZAS010000189.1 Protein Homology CDS 37942 39228 . - 0 ID=cds-WP_223962779.1;Parent=gene-LDO45_RS17780;Dbxref=GenBank:WP_223962779.1;Name=WP_223962779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883195.1;locus_tag=LDO45_RS17780;product=HlyC/CorC family transporter;protein_id=WP_223962779.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 39377 39453 . - . ID=gene-LDO45_RS17785;Name=LDO45_RS17785;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS17785;old_locus_tag=BDI4_TRNA41 NZ_CAJZAS010000189.1 tRNAscan-SE tRNA 39377 39453 . - . ID=rna-LDO45_RS17785;Parent=gene-LDO45_RS17785;anticodon=(pos:complement(39417..39419));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS17785;product=tRNA-Pro NZ_CAJZAS010000189.1 tRNAscan-SE exon 39377 39453 . - . ID=exon-LDO45_RS17785-1;Parent=rna-LDO45_RS17785;anticodon=(pos:complement(39417..39419));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS17785;product=tRNA-Pro NZ_CAJZAS010000189.1 RefSeq gene 39603 40598 . - . ID=gene-LDO45_RS17790;Name=LDO45_RS17790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17790;old_locus_tag=BDI4_350036 NZ_CAJZAS010000189.1 Protein Homology CDS 39603 40598 . - 0 ID=cds-WP_059700727.1;Parent=gene-LDO45_RS17790;Dbxref=GenBank:WP_059700727.1;Name=WP_059700727.1;Ontology_term=GO:0008299;gbkey=CDS;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091260.1;locus_tag=LDO45_RS17790;product=polyprenyl synthetase family protein;protein_id=WP_059700727.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 40809 41120 . + . ID=gene-LDO45_RS17795;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=LDO45_RS17795;old_locus_tag=BDI4_350037 NZ_CAJZAS010000189.1 Protein Homology CDS 40809 41120 . + 0 ID=cds-WP_006025184.1;Parent=gene-LDO45_RS17795;Dbxref=GenBank:WP_006025184.1;Name=WP_006025184.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011902040.1;locus_tag=LDO45_RS17795;product=50S ribosomal protein L21;protein_id=WP_006025184.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 41145 41408 . + . ID=gene-LDO45_RS17800;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=LDO45_RS17800;old_locus_tag=BDI4_350038 NZ_CAJZAS010000189.1 Protein Homology CDS 41145 41408 . + 0 ID=cds-WP_006476999.1;Parent=gene-LDO45_RS17800;Dbxref=GenBank:WP_006476999.1;Name=WP_006476999.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194025.1;locus_tag=LDO45_RS17800;product=50S ribosomal protein L27;protein_id=WP_006476999.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 41595 42707 . + . ID=gene-LDO45_RS17805;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=LDO45_RS17805;old_locus_tag=BDI4_350039 NZ_CAJZAS010000189.1 Protein Homology CDS 41595 42707 . + 0 ID=cds-WP_124610637.1;Parent=gene-LDO45_RS17805;Dbxref=GenBank:WP_124610637.1;Name=WP_124610637.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400418.1;locus_tag=LDO45_RS17805;product=Obg family GTPase CgtA;protein_id=WP_124610637.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 42798 43916 . + . ID=gene-LDO45_RS17810;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=LDO45_RS17810;old_locus_tag=BDI4_350040 NZ_CAJZAS010000189.1 Protein Homology CDS 42798 43916 . + 0 ID=cds-WP_059681797.1;Parent=gene-LDO45_RS17810;Dbxref=GenBank:WP_059681797.1;Name=WP_059681797.1;Ontology_term=GO:0006561,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013340556.1;locus_tag=LDO45_RS17810;product=glutamate 5-kinase;protein_id=WP_059681797.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 44023 44580 . - . ID=gene-LDO45_RS17815;Name=LDO45_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17815;old_locus_tag=BDI4_350041 NZ_CAJZAS010000189.1 Protein Homology CDS 44023 44580 . - 0 ID=cds-WP_059465329.1;Parent=gene-LDO45_RS17815;Dbxref=GenBank:WP_059465329.1;Name=WP_059465329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601058.1;locus_tag=LDO45_RS17815;product=CNP1-like family protein;protein_id=WP_059465329.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 44644 45291 . - . ID=gene-LDO45_RS17820;Name=LDO45_RS17820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17820;old_locus_tag=BDI4_350042 NZ_CAJZAS010000189.1 Protein Homology CDS 44644 45291 . - 0 ID=cds-WP_059535199.1;Parent=gene-LDO45_RS17820;Dbxref=GenBank:WP_059535199.1;Name=WP_059535199.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350862.1;locus_tag=LDO45_RS17820;product=RNA pyrophosphohydrolase;protein_id=WP_059535199.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 45510 47246 . + . ID=gene-LDO45_RS17825;Name=LDO45_RS17825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17825;old_locus_tag=BDI4_350043 NZ_CAJZAS010000189.1 Protein Homology CDS 45510 47246 . + 0 ID=cds-WP_223962781.1;Parent=gene-LDO45_RS17825;Dbxref=GenBank:WP_223962781.1;Name=WP_223962781.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA editing activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012434396.1;locus_tag=LDO45_RS17825;product=proline--tRNA ligase;protein_id=WP_223962781.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 47268 47870 . + . ID=gene-LDO45_RS17830;Name=LDO45_RS17830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17830;old_locus_tag=BDI4_350044 NZ_CAJZAS010000189.1 Protein Homology CDS 47268 47870 . + 0 ID=cds-WP_223962783.1;Parent=gene-LDO45_RS17830;Dbxref=GenBank:WP_223962783.1;Name=WP_223962783.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194061.1;locus_tag=LDO45_RS17830;product=MarC family protein;protein_id=WP_223962783.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 47956 48507 . - . ID=gene-LDO45_RS17835;Name=LDO45_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17835;old_locus_tag=BDI4_350045 NZ_CAJZAS010000189.1 Protein Homology CDS 47956 48507 . - 0 ID=cds-WP_059535202.1;Parent=gene-LDO45_RS17835;Dbxref=GenBank:WP_059535202.1;Name=WP_059535202.1;Ontology_term=GO:0009116;gbkey=CDS;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025192.1;locus_tag=LDO45_RS17835;product=hypoxanthine-guanine phosphoribosyltransferase;protein_id=WP_059535202.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 48602 49969 . - . ID=gene-LDO45_RS17840;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=LDO45_RS17840;old_locus_tag=BDI4_350046 NZ_CAJZAS010000189.1 Protein Homology CDS 48602 49969 . - 0 ID=cds-WP_059465333.1;Parent=gene-LDO45_RS17840;Dbxref=GenBank:WP_059465333.1;Name=WP_059465333.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194338.1;locus_tag=LDO45_RS17840;product=signal recognition particle protein;protein_id=WP_059465333.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 50059 50952 . + . ID=gene-LDO45_RS17845;Name=LDO45_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17845;old_locus_tag=BDI4_350047 NZ_CAJZAS010000189.1 Protein Homology CDS 50059 50952 . + 0 ID=cds-WP_059535204.1;Parent=gene-LDO45_RS17845;Dbxref=GenBank:WP_059535204.1;Name=WP_059535204.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538773.1;locus_tag=LDO45_RS17845;product=inner membrane protein YpjD;protein_id=WP_059535204.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 50966 51277 . + . ID=gene-LDO45_RS17850;Name=LDO45_RS17850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17850;old_locus_tag=BDI4_350048 NZ_CAJZAS010000189.1 Protein Homology CDS 50966 51277 . + 0 ID=cds-WP_223962785.1;Parent=gene-LDO45_RS17850;Dbxref=GenBank:WP_223962785.1;Name=WP_223962785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491491.1;locus_tag=LDO45_RS17850;product=PP0621 family protein;protein_id=WP_223962785.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 51274 51864 . + . ID=gene-LDO45_RS17855;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=LDO45_RS17855;old_locus_tag=BDI4_350049 NZ_CAJZAS010000189.1 Protein Homology CDS 51274 51864 . + 0 ID=cds-WP_059608190.1;Parent=gene-LDO45_RS17855;Dbxref=GenBank:WP_059608190.1;Name=WP_059608190.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752243.1;locus_tag=LDO45_RS17855;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_059608190.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 52317 55310 . + . ID=gene-LDO45_RS17860;Name=LDO45_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17860;old_locus_tag=BDI4_350050 NZ_CAJZAS010000189.1 Protein Homology CDS 52317 55310 . + 0 ID=cds-WP_223962787.1;Parent=gene-LDO45_RS17860;Dbxref=GenBank:WP_223962787.1;Name=WP_223962787.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544523.1;locus_tag=LDO45_RS17860;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_223962787.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 55674 56885 . + . ID=gene-LDO45_RS17865;Name=LDO45_RS17865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17865;old_locus_tag=BDI4_350051 NZ_CAJZAS010000189.1 Protein Homology CDS 55674 56885 . + 0 ID=cds-WP_059535212.1;Parent=gene-LDO45_RS17865;Dbxref=GenBank:WP_059535212.1;Name=WP_059535212.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194129.1;locus_tag=LDO45_RS17865;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=WP_059535212.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 56968 57294 . + . ID=gene-LDO45_RS17870;Name=LDO45_RS17870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17870;old_locus_tag=BDI4_350052 NZ_CAJZAS010000189.1 Protein Homology CDS 56968 57294 . + 0 ID=cds-WP_082721943.1;Parent=gene-LDO45_RS17870;Dbxref=GenBank:WP_082721943.1;Name=WP_082721943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091277.1;locus_tag=LDO45_RS17870;product=hypothetical protein;protein_id=WP_082721943.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 57323 58006 . + . ID=gene-LDO45_RS17875;Name=LDO45_RS17875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17875;old_locus_tag=BDI4_350053 NZ_CAJZAS010000189.1 Protein Homology CDS 57323 58006 . + 0 ID=cds-WP_223962789.1;Parent=gene-LDO45_RS17875;Dbxref=GenBank:WP_223962789.1;Name=WP_223962789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655917.1;locus_tag=LDO45_RS17875;product=histone H1-like DNA-binding protein;protein_id=WP_223962789.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 58222 58695 . - . ID=gene-LDO45_RS17880;Name=LDO45_RS17880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17880;old_locus_tag=BDI4_350054 NZ_CAJZAS010000189.1 Protein Homology CDS 58222 58695 . - 0 ID=cds-WP_059535216.1;Parent=gene-LDO45_RS17880;Dbxref=GenBank:WP_059535216.1;Name=WP_059535216.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601283.1;locus_tag=LDO45_RS17880;product=glycine zipper 2TM domain-containing protein;protein_id=WP_059535216.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 58715 59653 . - . ID=gene-LDO45_RS17885;Name=LDO45_RS17885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17885;old_locus_tag=BDI4_350055 NZ_CAJZAS010000189.1 Protein Homology CDS 58715 59653 . - 0 ID=cds-WP_059535217.1;Parent=gene-LDO45_RS17885;Dbxref=GenBank:WP_059535217.1;Name=WP_059535217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602176.1;locus_tag=LDO45_RS17885;product=carbohydrate kinase family protein;protein_id=WP_059535217.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 59748 60251 . - . ID=gene-LDO45_RS17890;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=LDO45_RS17890;old_locus_tag=BDI4_350056 NZ_CAJZAS010000189.1 Protein Homology CDS 59748 60251 . - 0 ID=cds-WP_059535219.1;Parent=gene-LDO45_RS17890;Dbxref=GenBank:WP_059535219.1;Name=WP_059535219.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765230.1;locus_tag=LDO45_RS17890;product=thiol peroxidase;protein_id=WP_059535219.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 60324 61634 . - . ID=gene-LDO45_RS17895;Name=LDO45_RS17895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17895;old_locus_tag=BDI4_350057 NZ_CAJZAS010000189.1 Protein Homology CDS 60324 61634 . - 0 ID=cds-WP_223962790.1;Parent=gene-LDO45_RS17895;Dbxref=GenBank:WP_223962790.1;Name=WP_223962790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496753.1;locus_tag=LDO45_RS17895;product=DUF3426 domain-containing protein;protein_id=WP_223962790.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 61680 62582 . - . ID=gene-LDO45_RS17900;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=LDO45_RS17900;old_locus_tag=BDI4_350058 NZ_CAJZAS010000189.1 Protein Homology CDS 61680 62582 . - 0 ID=cds-WP_059535223.1;Parent=gene-LDO45_RS17900;Dbxref=GenBank:WP_059535223.1;Name=WP_059535223.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490720.1;locus_tag=LDO45_RS17900;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_059535223.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 62585 63952 . - . ID=gene-LDO45_RS17905;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=LDO45_RS17905;old_locus_tag=BDI4_350059 NZ_CAJZAS010000189.1 Protein Homology CDS 62585 63952 . - 0 ID=cds-WP_059535225.1;Parent=gene-LDO45_RS17905;Dbxref=GenBank:WP_059535225.1;Name=WP_059535225.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017777083.1;locus_tag=LDO45_RS17905;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_059535225.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 64038 64514 . - . ID=gene-LDO45_RS17910;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=LDO45_RS17910;old_locus_tag=BDI4_350060 NZ_CAJZAS010000189.1 Protein Homology CDS 64038 64514 . - 0 ID=cds-WP_059535226.1;Parent=gene-LDO45_RS17910;Dbxref=GenBank:WP_059535226.1;Name=WP_059535226.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009888964.1;locus_tag=LDO45_RS17910;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_059535226.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 64579 65031 . - . ID=gene-LDO45_RS17915;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=LDO45_RS17915;old_locus_tag=BDI4_350061 NZ_CAJZAS010000189.1 Protein Homology CDS 64579 65031 . - 0 ID=cds-WP_057926821.1;Parent=gene-LDO45_RS17915;Dbxref=GenBank:WP_057926821.1;Name=WP_057926821.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756005.1;locus_tag=LDO45_RS17915;product=type II 3-dehydroquinate dehydratase;protein_id=WP_057926821.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 65226 65786 . - . ID=gene-LDO45_RS17920;Name=LDO45_RS17920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17920;old_locus_tag=BDI4_350062 NZ_CAJZAS010000189.1 Protein Homology CDS 65226 65786 . - 0 ID=cds-WP_223962792.1;Parent=gene-LDO45_RS17920;Dbxref=GenBank:WP_223962792.1;Name=WP_223962792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496749.1;locus_tag=LDO45_RS17920;product=TlpA disulfide reductase family protein;protein_id=WP_223962792.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 65794 66438 . - . ID=gene-LDO45_RS17925;Name=LDO45_RS17925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17925;old_locus_tag=BDI4_350064 NZ_CAJZAS010000189.1 Protein Homology CDS 65794 66438 . - 0 ID=cds-WP_059535498.1;Parent=gene-LDO45_RS17925;Dbxref=GenBank:WP_059535498.1;Name=WP_059535498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214153.1;locus_tag=LDO45_RS17925;product=hypothetical protein;protein_id=WP_059535498.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 66673 68058 . + . ID=gene-LDO45_RS17930;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=LDO45_RS17930;old_locus_tag=BDI4_350063 NZ_CAJZAS010000189.1 Protein Homology CDS 66673 68058 . + 0 ID=cds-WP_059689100.1;Parent=gene-LDO45_RS17930;Dbxref=GenBank:WP_059689100.1;Name=WP_059689100.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655924.1;locus_tag=LDO45_RS17930;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_059689100.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 68055 68624 . + . ID=gene-LDO45_RS17935;Name=LDO45_RS17935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17935;old_locus_tag=BDI4_350065 NZ_CAJZAS010000189.1 Protein Homology CDS 68055 68624 . + 0 ID=cds-WP_223962794.1;Parent=gene-LDO45_RS17935;Dbxref=GenBank:WP_223962794.1;Name=WP_223962794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350884.1;locus_tag=LDO45_RS17935;product=YqiA/YcfP family alpha/beta fold hydrolase;protein_id=WP_223962794.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 68706 70805 . + . ID=gene-LDO45_RS17940;Name=LDO45_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17940;old_locus_tag=BDI4_350066 NZ_CAJZAS010000189.1 Protein Homology CDS 68706 70805 . + 0 ID=cds-WP_059535235.1;Parent=gene-LDO45_RS17940;Dbxref=GenBank:WP_059535235.1;Name=WP_059535235.1;Ontology_term=GO:0003723,GO:0004540;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363053.1;locus_tag=LDO45_RS17940;product=RNB domain-containing ribonuclease;protein_id=WP_059535235.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 70802 71668 . + . ID=gene-LDO45_RS17945;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=LDO45_RS17945;old_locus_tag=BDI4_350067 NZ_CAJZAS010000189.1 Protein Homology CDS 70802 71668 . + 0 ID=cds-WP_059689097.1;Parent=gene-LDO45_RS17945;Dbxref=GenBank:WP_059689097.1;Name=WP_059689097.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655927.1;locus_tag=LDO45_RS17945;product=shikimate dehydrogenase;protein_id=WP_059689097.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 71683 72420 . + . ID=gene-LDO45_RS17950;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=LDO45_RS17950;old_locus_tag=BDI4_350068 NZ_CAJZAS010000189.1 Protein Homology CDS 71683 72420 . + 0 ID=cds-WP_059681846.1;Parent=gene-LDO45_RS17950;Dbxref=GenBank:WP_059681846.1;Name=WP_059681846.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350887.1;locus_tag=LDO45_RS17950;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_059681846.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 72847 74457 . + . ID=gene-LDO45_RS17955;Name=LDO45_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17955;old_locus_tag=BDI4_350070 NZ_CAJZAS010000189.1 Protein Homology CDS 72847 74457 . + 0 ID=cds-WP_059820715.1;Parent=gene-LDO45_RS17955;Dbxref=GenBank:WP_059820715.1;Name=WP_059820715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544540.1;locus_tag=LDO45_RS17955;product=S10 family peptidase;protein_id=WP_059820715.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 74542 74946 . + . ID=gene-LDO45_RS17960;Name=LDO45_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17960;old_locus_tag=BDI4_350071 NZ_CAJZAS010000189.1 Protein Homology CDS 74542 74946 . + 0 ID=cds-WP_223962796.1;Parent=gene-LDO45_RS17960;Dbxref=GenBank:WP_223962796.1;Name=WP_223962796.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655930.1;locus_tag=LDO45_RS17960;product=EF-hand domain-containing protein;protein_id=WP_223962796.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 75298 76197 . + . ID=gene-LDO45_RS17965;Name=LDO45_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17965;old_locus_tag=BDI4_350072 NZ_CAJZAS010000189.1 Protein Homology CDS 75298 76197 . + 0 ID=cds-WP_059465354.1;Parent=gene-LDO45_RS17965;Dbxref=GenBank:WP_059465354.1;Name=WP_059465354.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755792.1;locus_tag=LDO45_RS17965;product=IclR family transcriptional regulator;protein_id=WP_059465354.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 76194 77219 . + . ID=gene-LDO45_RS17970;Name=LDO45_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17970;old_locus_tag=BDI4_350073 NZ_CAJZAS010000189.1 Protein Homology CDS 76194 77219 . + 0 ID=cds-WP_223962798.1;Parent=gene-LDO45_RS17970;Dbxref=GenBank:WP_223962798.1;Name=WP_223962798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544542.1;locus_tag=LDO45_RS17970;product=2-dehydro-3-deoxygalactonokinase;protein_id=WP_223962798.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 77242 77919 . + . ID=gene-LDO45_RS17975;Name=LDO45_RS17975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17975;old_locus_tag=BDI4_350074 NZ_CAJZAS010000189.1 Protein Homology CDS 77242 77919 . + 0 ID=cds-WP_223962800.1;Parent=gene-LDO45_RS17975;Dbxref=GenBank:WP_223962800.1;Name=WP_223962800.1;Ontology_term=GO:0034194,GO:0008674;gbkey=CDS;go_function=2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity|0008674||IEA;go_process=D-galactonate catabolic process|0034194||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333520.1;locus_tag=LDO45_RS17975;product=2-dehydro-3-deoxy-6-phosphogalactonate aldolase;protein_id=WP_223962800.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 77919 78698 . + . ID=gene-LDO45_RS17980;Name=LDO45_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17980;old_locus_tag=BDI4_350075 NZ_CAJZAS010000189.1 Protein Homology CDS 77919 78698 . + 0 ID=cds-WP_059689135.1;Parent=gene-LDO45_RS17980;Dbxref=GenBank:WP_059689135.1;Name=WP_059689135.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527760.1;locus_tag=LDO45_RS17980;product=SDR family oxidoreductase;protein_id=WP_059689135.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 78801 79796 . + . ID=gene-LDO45_RS17985;Name=LDO45_RS17985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS17985;old_locus_tag=BDI4_350076 NZ_CAJZAS010000189.1 Protein Homology CDS 78801 79796 . + 0 ID=cds-WP_059535248.1;Parent=gene-LDO45_RS17985;Dbxref=GenBank:WP_059535248.1;Name=WP_059535248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761975.1;locus_tag=LDO45_RS17985;product=arabinose ABC transporter substrate-binding protein;protein_id=WP_059535248.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 79864 81384 . + . ID=gene-LDO45_RS17990;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=LDO45_RS17990;old_locus_tag=BDI4_350077 NZ_CAJZAS010000189.1 Protein Homology CDS 79864 81384 . + 0 ID=cds-WP_059535249.1;Parent=gene-LDO45_RS17990;Dbxref=GenBank:WP_059535249.1;Name=WP_059535249.1;Ontology_term=GO:0042882,GO:0005524,GO:0015612,GO:0016020;gbkey=CDS;gene=araG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type L-arabinose transporter activity|0015612||IEA;go_process=L-arabinose transmembrane transport|0042882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350895.1;locus_tag=LDO45_RS17990;product=L-arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_059535249.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 81465 82481 . + . ID=gene-LDO45_RS17995;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=LDO45_RS17995;old_locus_tag=BDI4_350078 NZ_CAJZAS010000189.1 Protein Homology CDS 81465 82481 . + 0 ID=cds-WP_059465359.1;Parent=gene-LDO45_RS17995;Dbxref=GenBank:WP_059465359.1;Name=WP_059465359.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=araH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025224.1;locus_tag=LDO45_RS17995;product=L-arabinose ABC transporter permease AraH;protein_id=WP_059465359.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 82505 83320 . + . ID=gene-LDO45_RS18000;Name=LDO45_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18000;old_locus_tag=BDI4_350079 NZ_CAJZAS010000189.1 Protein Homology CDS 82505 83320 . + 0 ID=cds-WP_223962802.1;Parent=gene-LDO45_RS18000;Dbxref=GenBank:WP_223962802.1;Name=WP_223962802.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400374.1;locus_tag=LDO45_RS18000;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_223962802.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 83395 84459 . + . ID=gene-LDO45_RS18005;Name=LDO45_RS18005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18005;old_locus_tag=BDI4_350080 NZ_CAJZAS010000189.1 Protein Homology CDS 83395 84459 . + 0 ID=cds-WP_223962804.1;Parent=gene-LDO45_RS18005;Dbxref=GenBank:WP_223962804.1;Name=WP_223962804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476953.1;locus_tag=LDO45_RS18005;product=aldose 1-epimerase;protein_id=WP_223962804.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 84499 85326 . + . ID=gene-LDO45_RS18010;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=LDO45_RS18010;old_locus_tag=BDI4_350081 NZ_CAJZAS010000189.1 Protein Homology CDS 84499 85326 . + 0 ID=cds-WP_223962806.1;Parent=gene-LDO45_RS18010;Dbxref=GenBank:WP_223962806.1;Name=WP_223962806.1;Ontology_term=GO:0006221,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009971072.1;locus_tag=LDO45_RS18010;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_223962806.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 85390 85890 . - . ID=gene-LDO45_RS18015;Name=LDO45_RS18015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18015;old_locus_tag=BDI4_350082 NZ_CAJZAS010000189.1 Protein Homology CDS 85390 85890 . - 0 ID=cds-WP_223962808.1;Parent=gene-LDO45_RS18015;Dbxref=GenBank:WP_223962808.1;Name=WP_223962808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601091.1;locus_tag=LDO45_RS18015;product=CinA family protein;protein_id=WP_223962808.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 85922 86464 . - . ID=gene-LDO45_RS18020;Name=LDO45_RS18020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18020;old_locus_tag=BDI4_350083 NZ_CAJZAS010000189.1 Protein Homology CDS 85922 86464 . - 0 ID=cds-WP_059535259.1;Parent=gene-LDO45_RS18020;Dbxref=GenBank:WP_059535259.1;Name=WP_059535259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415689.1;locus_tag=LDO45_RS18020;product=phosphatidylglycerophosphatase A;protein_id=WP_059535259.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 86454 87488 . - . ID=gene-LDO45_RS18025;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=LDO45_RS18025;old_locus_tag=BDI4_350084 NZ_CAJZAS010000189.1 Protein Homology CDS 86454 87488 . - 0 ID=cds-WP_223962810.1;Parent=gene-LDO45_RS18025;Dbxref=GenBank:WP_223962810.1;Name=WP_223962810.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363067.1;locus_tag=LDO45_RS18025;product=thiamine-phosphate kinase;protein_id=WP_223962810.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 87589 89931 . + . ID=gene-LDO45_RS18030;Name=LDO45_RS18030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18030;old_locus_tag=BDI4_350085 NZ_CAJZAS010000189.1 Protein Homology CDS 87589 89931 . + 0 ID=cds-WP_290371022.1;Parent=gene-LDO45_RS18030;Dbxref=GenBank:WP_290371022.1;Name=WP_290371022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760308.1;locus_tag=LDO45_RS18030;product=NADP-dependent malic enzyme;protein_id=WP_290371022.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 90311 90742 . + . ID=gene-LDO45_RS18035;Name=LDO45_RS18035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18035;old_locus_tag=BDI4_350086 NZ_CAJZAS010000189.1 Protein Homology CDS 90311 90742 . + 0 ID=cds-WP_014898117.1;Parent=gene-LDO45_RS18035;Dbxref=GenBank:WP_014898117.1;Name=WP_014898117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194152.1;locus_tag=LDO45_RS18035;product=ribonuclease;protein_id=WP_014898117.1;transl_table=11 NZ_CAJZAS010000189.1 RefSeq gene 90759 91211 . + . ID=gene-LDO45_RS18040;Name=LDO45_RS18040;end_range=91211,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18040;partial=true NZ_CAJZAS010000189.1 Protein Homology CDS 90759 91211 . + 0 ID=cds-WP_223962812.1;Parent=gene-LDO45_RS18040;Dbxref=GenBank:WP_223962812.1;Name=WP_223962812.1;end_range=91211,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350906.1;locus_tag=LDO45_RS18040;partial=true;product=barstar family protein;protein_id=WP_223962812.1;transl_table=11 ##sequence-region NZ_CAJZAS010000190.1 1 87103 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000190.1 RefSeq region 1 87103 . + . ID=NZ_CAJZAS010000190.1:1..87103;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_36 NZ_CAJZAS010000190.1 RefSeq gene 1 561 . + . ID=gene-LDO45_RS18045;Name=LDO45_RS18045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18045;old_locus_tag=BDI4_360001;partial=true;start_range=.,1 NZ_CAJZAS010000190.1 Protein Homology CDS 1 561 . + 0 ID=cds-WP_223962818.1;Parent=gene-LDO45_RS18045;Dbxref=GenBank:WP_223962818.1;Name=WP_223962818.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199064.1;locus_tag=LDO45_RS18045;partial=true;product=tyrosine-type recombinase/integrase;protein_id=WP_223962818.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 638 1852 . + . ID=gene-LDO45_RS18050;Name=LDO45_RS18050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18050;old_locus_tag=BDI4_360002 NZ_CAJZAS010000190.1 Protein Homology CDS 638 1852 . + 0 ID=cds-WP_223962820.1;Parent=gene-LDO45_RS18050;Dbxref=GenBank:WP_223962820.1;Name=WP_223962820.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011204773.1;locus_tag=LDO45_RS18050;product=class I SAM-dependent rRNA methyltransferase;protein_id=WP_223962820.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 2051 3124 . + . ID=gene-LDO45_RS18055;Name=LDO45_RS18055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18055;old_locus_tag=BDI4_360003 NZ_CAJZAS010000190.1 Protein Homology CDS 2051 3124 . + 0 ID=cds-WP_059691931.1;Parent=gene-LDO45_RS18055;Dbxref=GenBank:WP_059691931.1;Name=WP_059691931.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409693.1;locus_tag=LDO45_RS18055;product=GTP-binding protein;protein_id=WP_059691931.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 3620 4036 . + . ID=gene-LDO45_RS18060;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=LDO45_RS18060;old_locus_tag=BDI4_360004 NZ_CAJZAS010000190.1 Protein Homology CDS 3620 4036 . + 0 ID=cds-WP_006477498.1;Parent=gene-LDO45_RS18060;Dbxref=GenBank:WP_006477498.1;Name=WP_006477498.1;Ontology_term=GO:0006355,GO:0008270,GO:0019899;gbkey=CDS;gene=dksA;go_function=zinc ion binding|0008270||IEA,enzyme binding|0019899||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100883.1;locus_tag=LDO45_RS18060;product=RNA polymerase-binding protein DksA;protein_id=WP_006477498.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 4274 4810 . + . ID=gene-LDO45_RS18065;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=LDO45_RS18065;old_locus_tag=BDI4_360005 NZ_CAJZAS010000190.1 Protein Homology CDS 4274 4810 . + 0 ID=cds-WP_006760749.1;Parent=gene-LDO45_RS18065;Dbxref=GenBank:WP_006760749.1;Name=WP_006760749.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760749.1;locus_tag=LDO45_RS18065;product=ATP-dependent protease subunit HslV;protein_id=WP_006760749.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 4821 6164 . + . ID=gene-LDO45_RS18070;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=LDO45_RS18070;old_locus_tag=BDI4_360006 NZ_CAJZAS010000190.1 Protein Homology CDS 4821 6164 . + 0 ID=cds-WP_059703136.1;Parent=gene-LDO45_RS18070;Dbxref=GenBank:WP_059703136.1;Name=WP_059703136.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895729.1;locus_tag=LDO45_RS18070;product=ATP-dependent protease ATPase subunit HslU;protein_id=WP_059703136.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 6249 6791 . - . ID=gene-LDO45_RS18075;Name=LDO45_RS18075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18075;old_locus_tag=BDI4_360007 NZ_CAJZAS010000190.1 Protein Homology CDS 6249 6791 . - 0 ID=cds-WP_044847841.1;Parent=gene-LDO45_RS18075;Dbxref=GenBank:WP_044847841.1;Name=WP_044847841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334600.1;locus_tag=LDO45_RS18075;product=response regulator transcription factor;protein_id=WP_044847841.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 6805 8211 . - . ID=gene-LDO45_RS18080;Name=LDO45_RS18080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18080;old_locus_tag=BDI4_360008 NZ_CAJZAS010000190.1 Protein Homology CDS 6805 8211 . - 0 ID=cds-WP_059703134.1;Parent=gene-LDO45_RS18080;Dbxref=GenBank:WP_059703134.1;Name=WP_059703134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364951.1;locus_tag=LDO45_RS18080;product=ATP-binding protein;protein_id=WP_059703134.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 8324 8548 . - . ID=gene-LDO45_RS18085;Name=LDO45_RS18085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18085 NZ_CAJZAS010000190.1 Protein Homology CDS 8324 8548 . - 0 ID=cds-WP_059691929.1;Parent=gene-LDO45_RS18085;Dbxref=GenBank:WP_059691929.1;Name=WP_059691929.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407190.1;locus_tag=LDO45_RS18085;product=cysteine-rich CWC family protein;protein_id=WP_059691929.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 8845 9744 . + . ID=gene-LDO45_RS18090;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=LDO45_RS18090;old_locus_tag=BDI4_360009 NZ_CAJZAS010000190.1 Protein Homology CDS 8845 9744 . + 0 ID=cds-WP_059534964.1;Parent=gene-LDO45_RS18090;Dbxref=GenBank:WP_059534964.1;Name=WP_059534964.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490510.1;locus_tag=LDO45_RS18090;product=acetylglutamate kinase;protein_id=WP_059534964.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 9741 10532 . + . ID=gene-LDO45_RS18095;Name=LDO45_RS18095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18095;old_locus_tag=BDI4_360010 NZ_CAJZAS010000190.1 Protein Homology CDS 9741 10532 . + 0 ID=cds-WP_059534963.1;Parent=gene-LDO45_RS18095;Dbxref=GenBank:WP_059534963.1;Name=WP_059534963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329425.1;locus_tag=LDO45_RS18095;product=pyrimidine 5'-nucleotidase;protein_id=WP_059534963.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 10499 11161 . + . ID=gene-LDO45_RS18100;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=LDO45_RS18100;old_locus_tag=BDI4_360011 NZ_CAJZAS010000190.1 Protein Homology CDS 10499 11161 . + 0 ID=cds-WP_223962822.1;Parent=gene-LDO45_RS18100;Dbxref=GenBank:WP_223962822.1;Name=WP_223962822.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004548171.1;locus_tag=LDO45_RS18100;product=nucleoid occlusion factor SlmA;protein_id=WP_223962822.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 11416 12561 . + . ID=gene-LDO45_RS18105;Name=LDO45_RS18105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18105;old_locus_tag=BDI4_360012 NZ_CAJZAS010000190.1 Protein Homology CDS 11416 12561 . + 0 ID=cds-WP_059534960.1;Parent=gene-LDO45_RS18105;Dbxref=GenBank:WP_059534960.1;Name=WP_059534960.1;Ontology_term=GO:0009058,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761998.1;locus_tag=LDO45_RS18105;product=homoserine O-acetyltransferase;protein_id=WP_059534960.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 12558 13166 . + . ID=gene-LDO45_RS18110;Name=metW;gbkey=Gene;gene=metW;gene_biotype=protein_coding;locus_tag=LDO45_RS18110;old_locus_tag=BDI4_360013 NZ_CAJZAS010000190.1 Protein Homology CDS 12558 13166 . + 0 ID=cds-WP_044847830.1;Parent=gene-LDO45_RS18110;Dbxref=GenBank:WP_044847830.1;Name=WP_044847830.1;Ontology_term=GO:0009086;gbkey=CDS;gene=metW;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658215.1;locus_tag=LDO45_RS18110;product=methionine biosynthesis protein MetW;protein_id=WP_044847830.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 13283 14704 . + . ID=gene-LDO45_RS18115;Name=LDO45_RS18115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18115;old_locus_tag=BDI4_360014 NZ_CAJZAS010000190.1 Protein Homology CDS 13283 14704 . + 0 ID=cds-WP_059819947.1;Parent=gene-LDO45_RS18115;Dbxref=GenBank:WP_059819947.1;Name=WP_059819947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407205.1;locus_tag=LDO45_RS18115;product=AmpG family muropeptide MFS transporter;protein_id=WP_059819947.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 14694 15737 . + . ID=gene-LDO45_RS18120;Name=LDO45_RS18120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18120;old_locus_tag=BDI4_360015 NZ_CAJZAS010000190.1 Protein Homology CDS 14694 15737 . + 0 ID=cds-WP_223962824.1;Parent=gene-LDO45_RS18120;Dbxref=GenBank:WP_223962824.1;Name=WP_223962824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546470.1;locus_tag=LDO45_RS18120;product=M48 family metallopeptidase;protein_id=WP_223962824.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 15792 16736 . - . ID=gene-LDO45_RS18125;Name=LDO45_RS18125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18125;old_locus_tag=BDI4_360016 NZ_CAJZAS010000190.1 Protein Homology CDS 15792 16736 . - 0 ID=cds-WP_223962827.1;Parent=gene-LDO45_RS18125;Dbxref=GenBank:WP_223962827.1;Name=WP_223962827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658218.1;locus_tag=LDO45_RS18125;product=AraC family transcriptional regulator;protein_id=WP_223962827.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 16964 18016 . + . ID=gene-LDO45_RS18130;Name=LDO45_RS18130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18130;old_locus_tag=BDI4_360017 NZ_CAJZAS010000190.1 Protein Homology CDS 16964 18016 . + 0 ID=cds-WP_059691926.1;Parent=gene-LDO45_RS18130;Dbxref=GenBank:WP_059691926.1;Name=WP_059691926.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895709.1;locus_tag=LDO45_RS18130;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_059691926.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 18102 18824 . - . ID=gene-LDO45_RS18135;Name=LDO45_RS18135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18135;old_locus_tag=BDI4_360018 NZ_CAJZAS010000190.1 Protein Homology CDS 18102 18824 . - 0 ID=cds-WP_223962829.1;Parent=gene-LDO45_RS18135;Dbxref=GenBank:WP_223962829.1;Name=WP_223962829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018434196.1;locus_tag=LDO45_RS18135;product=hypothetical protein;protein_id=WP_223962829.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 18821 19435 . - . ID=gene-LDO45_RS18140;Name=LDO45_RS18140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18140;old_locus_tag=BDI4_360019 NZ_CAJZAS010000190.1 Protein Homology CDS 18821 19435 . - 0 ID=cds-WP_223962831.1;Parent=gene-LDO45_RS18140;Dbxref=GenBank:WP_223962831.1;Name=WP_223962831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019447353.1;locus_tag=LDO45_RS18140;product=hypothetical protein;protein_id=WP_223962831.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 19432 20004 . - . ID=gene-LDO45_RS18145;Name=LDO45_RS18145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18145;old_locus_tag=BDI4_360020 NZ_CAJZAS010000190.1 Protein Homology CDS 19432 20004 . - 0 ID=cds-WP_223962833.1;Parent=gene-LDO45_RS18145;Dbxref=GenBank:WP_223962833.1;Name=WP_223962833.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017315.5;locus_tag=LDO45_RS18145;product=PAAR domain-containing protein;protein_id=WP_223962833.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 19973 20359 . - . ID=gene-LDO45_RS18150;Name=LDO45_RS18150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18150;old_locus_tag=BDI4_360021 NZ_CAJZAS010000190.1 Protein Homology CDS 19973 20359 . - 0 ID=cds-WP_223962835.1;Parent=gene-LDO45_RS18150;Dbxref=GenBank:WP_223962835.1;Name=WP_223962835.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017315.5;locus_tag=LDO45_RS18150;product=PAAR domain-containing protein;protein_id=WP_223962835.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 20702 21475 . - . ID=gene-LDO45_RS18155;Name=LDO45_RS18155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18155;old_locus_tag=BDI4_360022 NZ_CAJZAS010000190.1 Protein Homology CDS 20702 21475 . - 0 ID=cds-WP_059534945.1;Parent=gene-LDO45_RS18155;Dbxref=GenBank:WP_059534945.1;Name=WP_059534945.1;Ontology_term=GO:0006281,GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090333.1;locus_tag=LDO45_RS18155;product=exodeoxyribonuclease III;protein_id=WP_059534945.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 21525 22364 . - . ID=gene-LDO45_RS18160;Name=LDO45_RS18160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18160;old_locus_tag=BDI4_360023 NZ_CAJZAS010000190.1 Protein Homology CDS 21525 22364 . - 0 ID=cds-WP_059534943.1;Parent=gene-LDO45_RS18160;Dbxref=GenBank:WP_059534943.1;Name=WP_059534943.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523089.1;locus_tag=LDO45_RS18160;product=polyphosphate kinase 2 family protein;protein_id=WP_059534943.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 22491 23963 . - . ID=gene-LDO45_RS18165;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=LDO45_RS18165;old_locus_tag=BDI4_360024 NZ_CAJZAS010000190.1 Protein Homology CDS 22491 23963 . - 0 ID=cds-WP_059534941.1;Parent=gene-LDO45_RS18165;Dbxref=GenBank:WP_059534941.1;Name=WP_059534941.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190092.1;locus_tag=LDO45_RS18165;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=WP_059534941.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 23968 25458 . - . ID=gene-LDO45_RS18170;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=LDO45_RS18170;old_locus_tag=BDI4_360025 NZ_CAJZAS010000190.1 Protein Homology CDS 23968 25458 . - 0 ID=cds-WP_223962837.1;Parent=gene-LDO45_RS18170;Dbxref=GenBank:WP_223962837.1;Name=WP_223962837.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494379.1;locus_tag=LDO45_RS18170;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=WP_223962837.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 25525 25824 . - . ID=gene-LDO45_RS18175;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=LDO45_RS18175;old_locus_tag=BDI4_360027 NZ_CAJZAS010000190.1 Protein Homology CDS 25525 25824 . - 0 ID=cds-WP_006407213.1;Parent=gene-LDO45_RS18175;Dbxref=GenBank:WP_006407213.1;Name=WP_006407213.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012399478.1;locus_tag=LDO45_RS18175;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=WP_006407213.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 26192 27235 . + . ID=gene-LDO45_RS18180;Name=LDO45_RS18180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18180;old_locus_tag=BDI4_360028 NZ_CAJZAS010000190.1 Protein Homology CDS 26192 27235 . + 0 ID=cds-WP_004189550.1;Parent=gene-LDO45_RS18180;Dbxref=GenBank:WP_004189550.1;Name=WP_004189550.1;Ontology_term=GO:0000902,GO:0008360,GO:0005524,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA;go_process=cell morphogenesis|0000902||IEA,regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004628293.1;locus_tag=LDO45_RS18180;product=rod shape-determining protein;protein_id=WP_004189550.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 27363 28430 . + . ID=gene-LDO45_RS18185;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=LDO45_RS18185;old_locus_tag=BDI4_360029 NZ_CAJZAS010000190.1 Protein Homology CDS 27363 28430 . + 0 ID=cds-WP_059534937.1;Parent=gene-LDO45_RS18185;Dbxref=GenBank:WP_059534937.1;Name=WP_059534937.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546475.1;locus_tag=LDO45_RS18185;product=rod shape-determining protein MreC;protein_id=WP_059534937.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 28427 28939 . + . ID=gene-LDO45_RS18190;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=LDO45_RS18190;old_locus_tag=BDI4_360030 NZ_CAJZAS010000190.1 Protein Homology CDS 28427 28939 . + 0 ID=cds-WP_009687274.1;Parent=gene-LDO45_RS18190;Dbxref=GenBank:WP_009687274.1;Name=WP_009687274.1;Ontology_term=GO:0008360,GO:0016020;gbkey=CDS;gene=mreD;go_component=membrane|0016020||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189260.1;locus_tag=LDO45_RS18190;product=rod shape-determining protein MreD;protein_id=WP_009687274.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 29049 31334 . + . ID=gene-LDO45_RS18195;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=LDO45_RS18195;old_locus_tag=BDI4_360031 NZ_CAJZAS010000190.1 Protein Homology CDS 29049 31334 . + 0 ID=cds-WP_223962839.1;Parent=gene-LDO45_RS18195;Dbxref=GenBank:WP_223962839.1;Name=WP_223962839.1;Ontology_term=GO:0009252,GO:0003824,GO:0008658,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=catalytic activity|0003824||IEA,penicillin binding|0008658||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214361.1;locus_tag=LDO45_RS18195;product=penicillin-binding protein 2;protein_id=WP_223962839.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 31346 32494 . + . ID=gene-LDO45_RS18200;Name=rodA;gbkey=Gene;gene=rodA;gene_biotype=protein_coding;locus_tag=LDO45_RS18200;old_locus_tag=BDI4_360032 NZ_CAJZAS010000190.1 Protein Homology CDS 31346 32494 . + 0 ID=cds-WP_059534933.1;Parent=gene-LDO45_RS18200;Dbxref=GenBank:WP_059534933.1;Name=WP_059534933.1;Ontology_term=GO:0008360,GO:0016020;gbkey=CDS;gene=rodA;go_component=membrane|0016020||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525857.1;locus_tag=LDO45_RS18200;product=rod shape-determining protein RodA;protein_id=WP_059534933.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 32604 33380 . - . ID=gene-LDO45_RS18205;Name=LDO45_RS18205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18205;old_locus_tag=BDI4_360033 NZ_CAJZAS010000190.1 Protein Homology CDS 32604 33380 . - 0 ID=cds-WP_223962841.1;Parent=gene-LDO45_RS18205;Dbxref=GenBank:WP_223962841.1;Name=WP_223962841.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495380.1;locus_tag=LDO45_RS18205;product=tetratricopeptide repeat protein;protein_id=WP_223962841.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 33377 34162 . - . ID=gene-LDO45_RS18210;Name=LDO45_RS18210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18210;old_locus_tag=BDI4_360034 NZ_CAJZAS010000190.1 Protein Homology CDS 33377 34162 . - 0 ID=cds-WP_223962843.1;Parent=gene-LDO45_RS18210;Dbxref=GenBank:WP_223962843.1;Name=WP_223962843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334622.1;locus_tag=LDO45_RS18210;product=HpcH/HpaI aldolase/citrate lyase family protein;protein_id=WP_223962843.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 34439 34891 . - . ID=gene-LDO45_RS18215;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=LDO45_RS18215;old_locus_tag=BDI4_360035 NZ_CAJZAS010000190.1 Protein Homology CDS 34439 34891 . - 0 ID=cds-WP_044847357.1;Parent=gene-LDO45_RS18215;Dbxref=GenBank:WP_044847357.1;Name=WP_044847357.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482561.1;locus_tag=LDO45_RS18215;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_044847357.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 34910 35542 . - . ID=gene-LDO45_RS18220;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=LDO45_RS18220;old_locus_tag=BDI4_360036 NZ_CAJZAS010000190.1 Protein Homology CDS 34910 35542 . - 0 ID=cds-WP_059468636.1;Parent=gene-LDO45_RS18220;Dbxref=GenBank:WP_059468636.1;Name=WP_059468636.1;Ontology_term=GO:0006400,GO:0008616,GO:0046872,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007733358.1;locus_tag=LDO45_RS18220;product=7-carboxy-7-deazaguanine synthase;protein_id=WP_059468636.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 35618 36352 . - . ID=gene-LDO45_RS18225;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=LDO45_RS18225;old_locus_tag=BDI4_360037 NZ_CAJZAS010000190.1 Protein Homology CDS 35618 36352 . - 0 ID=cds-WP_059534927.1;Parent=gene-LDO45_RS18225;Dbxref=GenBank:WP_059534927.1;Name=WP_059534927.1;Ontology_term=GO:0008616;gbkey=CDS;gene=queC;go_process=queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407218.1;locus_tag=LDO45_RS18225;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_059534927.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 36704 36779 . - . ID=gene-LDO45_RS18230;Name=LDO45_RS18230;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS18230;old_locus_tag=BDI4_TRNA40 NZ_CAJZAS010000190.1 tRNAscan-SE tRNA 36704 36779 . - . ID=rna-LDO45_RS18230;Parent=gene-LDO45_RS18230;anticodon=(pos:complement(36744..36746));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS18230;product=tRNA-Phe NZ_CAJZAS010000190.1 tRNAscan-SE exon 36704 36779 . - . ID=exon-LDO45_RS18230-1;Parent=rna-LDO45_RS18230;anticodon=(pos:complement(36744..36746));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS18230;product=tRNA-Phe NZ_CAJZAS010000190.1 RefSeq gene 36841 37542 . - . ID=gene-LDO45_RS18235;Name=esaR;gbkey=Gene;gene=esaR;gene_biotype=protein_coding;locus_tag=LDO45_RS18235;old_locus_tag=BDI4_360038 NZ_CAJZAS010000190.1 Protein Homology CDS 36841 37542 . - 0 ID=cds-WP_059534925.1;Parent=gene-LDO45_RS18235;Dbxref=GenBank:WP_059534925.1;Name=WP_059534925.1;gbkey=CDS;gene=esaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009935896.1;locus_tag=LDO45_RS18235;product=response regulator transcription factor EsaR;protein_id=WP_059534925.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 37543 39957 . - . ID=gene-LDO45_RS18240;Name=esaS;gbkey=Gene;gene=esaS;gene_biotype=protein_coding;locus_tag=LDO45_RS18240;old_locus_tag=BDI4_360039 NZ_CAJZAS010000190.1 Protein Homology CDS 37543 39957 . - 0 ID=cds-WP_059534923.1;Parent=gene-LDO45_RS18240;Dbxref=GenBank:WP_059534923.1;Name=WP_059534923.1;Note=Enhanced Sensitivity to Antibiotics Sensor;gbkey=CDS;gene=esaS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353567.1;locus_tag=LDO45_RS18240;product=sensor histidine kinase EsaS;protein_id=WP_059534923.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 39947 40537 . - . ID=gene-LDO45_RS18245;Name=LDO45_RS18245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18245;old_locus_tag=BDI4_360040 NZ_CAJZAS010000190.1 Protein Homology CDS 39947 40537 . - 0 ID=cds-WP_059535132.1;Parent=gene-LDO45_RS18245;Dbxref=GenBank:WP_059535132.1;Name=WP_059535132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553747.1;locus_tag=LDO45_RS18245;product=DUF4390 domain-containing protein;protein_id=WP_059535132.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 40534 41922 . - . ID=gene-LDO45_RS18250;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=LDO45_RS18250;old_locus_tag=BDI4_360041 NZ_CAJZAS010000190.1 Protein Homology CDS 40534 41922 . - 0 ID=cds-WP_059703118.1;Parent=gene-LDO45_RS18250;Dbxref=GenBank:WP_059703118.1;Name=WP_059703118.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750072.1;locus_tag=LDO45_RS18250;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_059703118.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 42098 42955 . - . ID=gene-LDO45_RS18255;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=LDO45_RS18255;old_locus_tag=BDI4_360042 NZ_CAJZAS010000190.1 Protein Homology CDS 42098 42955 . - 0 ID=cds-WP_006485774.1;Parent=gene-LDO45_RS18255;Dbxref=GenBank:WP_006485774.1;Name=WP_006485774.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007581962.1;locus_tag=LDO45_RS18255;product=zinc metalloprotease HtpX;protein_id=WP_006485774.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 43056 43697 . - . ID=gene-LDO45_RS18260;Name=LDO45_RS18260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18260;old_locus_tag=BDI4_360043 NZ_CAJZAS010000190.1 Protein Homology CDS 43056 43697 . - 0 ID=cds-WP_223962846.1;Parent=gene-LDO45_RS18260;Dbxref=GenBank:WP_223962846.1;Name=WP_223962846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010113212.1;locus_tag=LDO45_RS18260;product=LysE family translocator;protein_id=WP_223962846.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 43808 44803 . - . ID=gene-LDO45_RS18265;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=LDO45_RS18265;old_locus_tag=BDI4_360044 NZ_CAJZAS010000190.1 Protein Homology CDS 43808 44803 . - 0 ID=cds-WP_223962848.1;Parent=gene-LDO45_RS18265;Dbxref=GenBank:WP_223962848.1;Name=WP_223962848.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759749.1;locus_tag=LDO45_RS18265;product=methionyl-tRNA formyltransferase;protein_id=WP_223962848.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 44838 45341 . - . ID=gene-LDO45_RS18270;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=LDO45_RS18270;old_locus_tag=BDI4_360045 NZ_CAJZAS010000190.1 Protein Homology CDS 44838 45341 . - 0 ID=cds-WP_223962850.1;Parent=gene-LDO45_RS18270;Dbxref=GenBank:WP_223962850.1;Name=WP_223962850.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100727.1;locus_tag=LDO45_RS18270;product=peptide deformylase;protein_id=WP_223962850.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 45526 46845 . + . ID=gene-LDO45_RS18275;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=LDO45_RS18275;old_locus_tag=BDI4_360046 NZ_CAJZAS010000190.1 Protein Homology CDS 45526 46845 . + 0 ID=cds-WP_223962853.1;Parent=gene-LDO45_RS18275;Dbxref=GenBank:WP_223962853.1;Name=WP_223962853.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004203630.1;locus_tag=LDO45_RS18275;product=DNA-processing protein DprA;protein_id=WP_223962853.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 46883 47263 . + . ID=gene-LDO45_RS18280;Name=LDO45_RS18280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18280;old_locus_tag=BDI4_360047 NZ_CAJZAS010000190.1 Protein Homology CDS 46883 47263 . + 0 ID=cds-WP_059534911.1;Parent=gene-LDO45_RS18280;Dbxref=GenBank:WP_059534911.1;Name=WP_059534911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477457.1;locus_tag=LDO45_RS18280;product=thioredoxin family protein;protein_id=WP_059534911.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 47457 50054 . + . ID=gene-LDO45_RS18285;Name=LDO45_RS18285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18285;old_locus_tag=BDI4_360048 NZ_CAJZAS010000190.1 Protein Homology CDS 47457 50054 . + 0 ID=cds-WP_059703108.1;Parent=gene-LDO45_RS18285;Dbxref=GenBank:WP_059703108.1;Name=WP_059703108.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009902112.1;locus_tag=LDO45_RS18285;product=DNA topoisomerase III;protein_id=WP_059703108.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 50197 51246 . - . ID=gene-LDO45_RS18290;Name=LDO45_RS18290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18290;old_locus_tag=BDI4_360049 NZ_CAJZAS010000190.1 Protein Homology CDS 50197 51246 . - 0 ID=cds-WP_059534907.1;Parent=gene-LDO45_RS18290;Dbxref=GenBank:WP_059534907.1;Name=WP_059534907.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893648.1;locus_tag=LDO45_RS18290;product=LysR family transcriptional regulator;protein_id=WP_059534907.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 51673 52686 . + . ID=gene-LDO45_RS18295;Name=LDO45_RS18295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18295;old_locus_tag=BDI4_360050 NZ_CAJZAS010000190.1 Protein Homology CDS 51673 52686 . + 0 ID=cds-WP_057924643.1;Parent=gene-LDO45_RS18295;Dbxref=GenBank:WP_057924643.1;Name=WP_057924643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090305.1;locus_tag=LDO45_RS18295;product=D-2-hydroxyacid dehydrogenase family protein;protein_id=WP_057924643.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 52736 53602 . - . ID=gene-LDO45_RS18300;Name=LDO45_RS18300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18300;old_locus_tag=BDI4_360051 NZ_CAJZAS010000190.1 Protein Homology CDS 52736 53602 . - 0 ID=cds-WP_223962855.1;Parent=gene-LDO45_RS18300;Dbxref=GenBank:WP_223962855.1;Name=WP_223962855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407226.1;locus_tag=LDO45_RS18300;product=patatin-like phospholipase family protein;protein_id=WP_223962855.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 53611 54015 . - . ID=gene-LDO45_RS18305;Name=LDO45_RS18305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18305;old_locus_tag=BDI4_360052 NZ_CAJZAS010000190.1 Protein Homology CDS 53611 54015 . - 0 ID=cds-WP_040142566.1;Parent=gene-LDO45_RS18305;Dbxref=GenBank:WP_040142566.1;Name=WP_040142566.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877330.1;locus_tag=LDO45_RS18305;product=PaaI family thioesterase;protein_id=WP_040142566.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 54207 54282 . + . ID=gene-LDO45_RS18310;Name=LDO45_RS18310;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS18310;old_locus_tag=BDI4_TRNA11 NZ_CAJZAS010000190.1 tRNAscan-SE tRNA 54207 54282 . + . ID=rna-LDO45_RS18310;Parent=gene-LDO45_RS18310;anticodon=(pos:54240..54242);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS18310;product=tRNA-Lys NZ_CAJZAS010000190.1 tRNAscan-SE exon 54207 54282 . + . ID=exon-LDO45_RS18310-1;Parent=rna-LDO45_RS18310;anticodon=(pos:54240..54242);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS18310;product=tRNA-Lys NZ_CAJZAS010000190.1 RefSeq gene 54484 55533 . + . ID=gene-LDO45_RS18315;Name=LDO45_RS18315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18315;old_locus_tag=BDI4_360054 NZ_CAJZAS010000190.1 Protein Homology CDS 54484 55533 . + 0 ID=cds-WP_059703104.1;Parent=gene-LDO45_RS18315;Dbxref=GenBank:WP_059703104.1;Name=WP_059703104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658243.1;locus_tag=LDO45_RS18315;product=DUF3592 domain-containing protein;protein_id=WP_059703104.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 55576 56190 . - . ID=gene-LDO45_RS18320;Name=LDO45_RS18320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18320;old_locus_tag=BDI4_360055 NZ_CAJZAS010000190.1 Protein Homology CDS 55576 56190 . - 0 ID=cds-WP_223962857.1;Parent=gene-LDO45_RS18320;Dbxref=GenBank:WP_223962857.1;Name=WP_223962857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495393.1;locus_tag=LDO45_RS18320;product=CGNR zinc finger domain-containing protein;protein_id=WP_223962857.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 56272 57087 . + . ID=gene-LDO45_RS18325;Name=LDO45_RS18325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18325;old_locus_tag=BDI4_360056 NZ_CAJZAS010000190.1 Protein Homology CDS 56272 57087 . + 0 ID=cds-WP_059703101.1;Parent=gene-LDO45_RS18325;Dbxref=GenBank:WP_059703101.1;Name=WP_059703101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485775.1;locus_tag=LDO45_RS18325;product=alpha/beta fold hydrolase;protein_id=WP_059703101.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 57117 57875 . - . ID=gene-LDO45_RS18330;Name=LDO45_RS18330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18330;old_locus_tag=BDI4_360057 NZ_CAJZAS010000190.1 Protein Homology CDS 57117 57875 . - 0 ID=cds-WP_059534895.1;Parent=gene-LDO45_RS18330;Dbxref=GenBank:WP_059534895.1;Name=WP_059534895.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485792.1;locus_tag=LDO45_RS18330;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_059534895.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 57872 58552 . - . ID=gene-LDO45_RS18335;Name=LDO45_RS18335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18335;old_locus_tag=BDI4_360058 NZ_CAJZAS010000190.1 Protein Homology CDS 57872 58552 . - 0 ID=cds-WP_223962859.1;Parent=gene-LDO45_RS18335;Dbxref=GenBank:WP_223962859.1;Name=WP_223962859.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485773.1;locus_tag=LDO45_RS18335;product=amino acid ABC transporter permease;protein_id=WP_223962859.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 58567 59349 . - . ID=gene-LDO45_RS18340;Name=LDO45_RS18340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18340;old_locus_tag=BDI4_360059 NZ_CAJZAS010000190.1 Protein Homology CDS 58567 59349 . - 0 ID=cds-WP_059819971.1;Parent=gene-LDO45_RS18340;Dbxref=GenBank:WP_059819971.1;Name=WP_059819971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334643.1;locus_tag=LDO45_RS18340;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_059819971.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 59532 59957 . + . ID=gene-LDO45_RS34595;Name=LDO45_RS34595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34595;old_locus_tag=BDI4_360060 NZ_CAJZAS010000190.1 GeneMarkS-2+ CDS 59532 59957 . + 0 ID=cds-WP_374109540.1;Parent=gene-LDO45_RS34595;Dbxref=GenBank:WP_374109540.1;Name=WP_374109540.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34595;product=hypothetical protein;protein_id=WP_374109540.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 59997 61451 . - . ID=gene-LDO45_RS18350;Name=phnY;gbkey=Gene;gene=phnY;gene_biotype=protein_coding;locus_tag=LDO45_RS18350;old_locus_tag=BDI4_360061 NZ_CAJZAS010000190.1 Protein Homology CDS 59997 61451 . - 0 ID=cds-WP_223962861.1;Parent=gene-LDO45_RS18350;Dbxref=GenBank:WP_223962861.1;Name=WP_223962861.1;gbkey=CDS;gene=phnY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407230.1;locus_tag=LDO45_RS18350;product=phosphonoacetaldehyde dehydrogenase;protein_id=WP_223962861.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 61479 62717 . - . ID=gene-LDO45_RS18355;Name=phnA;gbkey=Gene;gene=phnA;gene_biotype=protein_coding;locus_tag=LDO45_RS18355;old_locus_tag=BDI4_360062 NZ_CAJZAS010000190.1 Protein Homology CDS 61479 62717 . - 0 ID=cds-WP_223962863.1;Parent=gene-LDO45_RS18355;Dbxref=GenBank:WP_223962863.1;Name=WP_223962863.1;Ontology_term=GO:0019636,GO:0047400;gbkey=CDS;gene=phnA;go_function=phosphonoacetate hydrolase activity|0047400||IEA;go_process=phosphonoacetate metabolic process|0019636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214373.1;locus_tag=LDO45_RS18355;product=phosphonoacetate hydrolase;protein_id=WP_223962863.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq pseudogene 62877 63053 . + . ID=gene-LDO45_RS18360;Name=LDO45_RS18360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS18360;old_locus_tag=BDI4_360063;partial=true;pseudo=true;start_range=.,62877 NZ_CAJZAS010000190.1 Protein Homology CDS 62877 63053 . + 0 ID=cds-LDO45_RS18360;Parent=gene-LDO45_RS18360;Note=catalyzes the formation of phosphonoacetaldehyde from 2-aminoethylphosphonate and pyruvate%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353592.1;locus_tag=LDO45_RS18360;partial=true;product=2-aminoethylphosphonate--pyruvate transaminase;pseudo=true;start_range=.,62877;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 63169 64557 . + . ID=gene-LDO45_RS18365;Name=LDO45_RS18365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18365;old_locus_tag=BDI4_360064 NZ_CAJZAS010000190.1 Protein Homology CDS 63169 64557 . + 0 ID=cds-WP_223962865.1;Parent=gene-LDO45_RS18365;Dbxref=GenBank:WP_223962865.1;Name=WP_223962865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756956.1;locus_tag=LDO45_RS18365;product=FAD-dependent oxidoreductase;protein_id=WP_223962865.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 64651 65379 . - . ID=gene-LDO45_RS18370;Name=LDO45_RS18370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18370;old_locus_tag=BDI4_360065 NZ_CAJZAS010000190.1 Protein Homology CDS 64651 65379 . - 0 ID=cds-WP_223962866.1;Parent=gene-LDO45_RS18370;Dbxref=GenBank:WP_223962866.1;Name=WP_223962866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334649.1;locus_tag=LDO45_RS18370;product=phosphonate utilization associated transcriptional regulator;protein_id=WP_223962866.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 65564 67735 . - . ID=gene-LDO45_RS18375;Name=LDO45_RS18375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18375;old_locus_tag=BDI4_360066 NZ_CAJZAS010000190.1 Protein Homology CDS 65564 67735 . - 0 ID=cds-WP_223962867.1;Parent=gene-LDO45_RS18375;Dbxref=GenBank:WP_223962867.1;Name=WP_223962867.1;Ontology_term=GO:0034480;gbkey=CDS;go_function=phosphatidylcholine phospholipase C activity|0034480||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895667.1;locus_tag=LDO45_RS18375;product=phosphocholine-specific phospholipase C;protein_id=WP_223962867.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 67965 68873 . + . ID=gene-LDO45_RS18380;Name=LDO45_RS18380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18380;old_locus_tag=BDI4_360067 NZ_CAJZAS010000190.1 Protein Homology CDS 67965 68873 . + 0 ID=cds-WP_223962868.1;Parent=gene-LDO45_RS18380;Dbxref=GenBank:WP_223962868.1;Name=WP_223962868.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498685.1;locus_tag=LDO45_RS18380;product=LysR family transcriptional regulator;protein_id=WP_223962868.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 69007 70647 . - . ID=gene-LDO45_RS18385;Name=LDO45_RS18385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18385;old_locus_tag=BDI4_360068 NZ_CAJZAS010000190.1 Protein Homology CDS 69007 70647 . - 0 ID=cds-WP_223962869.1;Parent=gene-LDO45_RS18385;Dbxref=GenBank:WP_223962869.1;Name=WP_223962869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886442.1;locus_tag=LDO45_RS18385;product=L-lactate permease;protein_id=WP_223962869.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 71309 71635 . + . ID=gene-LDO45_RS18390;Name=LDO45_RS18390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18390;old_locus_tag=BDI4_360069 NZ_CAJZAS010000190.1 Protein Homology CDS 71309 71635 . + 0 ID=cds-WP_223962870.1;Parent=gene-LDO45_RS18390;Dbxref=GenBank:WP_223962870.1;Name=WP_223962870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477430.1;locus_tag=LDO45_RS18390;product=DUF4148 domain-containing protein;protein_id=WP_223962870.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 71727 73340 . - . ID=gene-LDO45_RS18395;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=LDO45_RS18395;old_locus_tag=BDI4_360070 NZ_CAJZAS010000190.1 Protein Homology CDS 71727 73340 . - 0 ID=cds-WP_223962871.1;Parent=gene-LDO45_RS18395;Dbxref=GenBank:WP_223962871.1;Name=WP_223962871.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009962323.1;locus_tag=LDO45_RS18395;product=glutamate--cysteine ligase;protein_id=WP_223962871.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 73820 74773 . - . ID=gene-LDO45_RS18400;Name=LDO45_RS18400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18400;old_locus_tag=BDI4_360073 NZ_CAJZAS010000190.1 Protein Homology CDS 73820 74773 . - 0 ID=cds-WP_373557209.1;Parent=gene-LDO45_RS18400;Dbxref=GenBank:WP_373557209.1;Name=WP_373557209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546507.1;locus_tag=LDO45_RS18400;product=DNA-3-methyladenine glycosylase;protein_id=WP_373557209.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 74791 75882 . - . ID=gene-LDO45_RS18405;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=LDO45_RS18405;old_locus_tag=BDI4_360074 NZ_CAJZAS010000190.1 Protein Homology CDS 74791 75882 . - 0 ID=cds-WP_059691902.1;Parent=gene-LDO45_RS18405;Dbxref=GenBank:WP_059691902.1;Name=WP_059691902.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477427.1;locus_tag=LDO45_RS18405;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_059691902.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 76323 76736 . + . ID=gene-LDO45_RS18410;Name=LDO45_RS18410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18410;old_locus_tag=BDI4_360075 NZ_CAJZAS010000190.1 Protein Homology CDS 76323 76736 . + 0 ID=cds-WP_059534865.1;Parent=gene-LDO45_RS18410;Dbxref=GenBank:WP_059534865.1;Name=WP_059534865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214381.1;locus_tag=LDO45_RS18410;product=VOC family protein;protein_id=WP_059534865.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 76747 77301 . - . ID=gene-LDO45_RS18415;Name=LDO45_RS18415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18415;old_locus_tag=BDI4_360076 NZ_CAJZAS010000190.1 Protein Homology CDS 76747 77301 . - 0 ID=cds-WP_006498691.1;Parent=gene-LDO45_RS18415;Dbxref=GenBank:WP_006498691.1;Name=WP_006498691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908298.1;locus_tag=LDO45_RS18415;product=YaeQ family protein;protein_id=WP_006498691.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 77479 77826 . - . ID=gene-LDO45_RS18420;Name=sap1;gbkey=Gene;gene=sap1;gene_biotype=protein_coding;locus_tag=LDO45_RS18420;old_locus_tag=BDI4_360077 NZ_CAJZAS010000190.1 Protein Homology CDS 77479 77826 . - 0 ID=cds-WP_044848669.1;Parent=gene-LDO45_RS18420;Dbxref=GenBank:WP_044848669.1;Name=WP_044848669.1;gbkey=CDS;gene=sap1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525830.1;locus_tag=LDO45_RS18420;product=surface attachment protein Sap1;protein_id=WP_044848669.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 78328 78870 . - . ID=gene-LDO45_RS18425;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=LDO45_RS18425;old_locus_tag=BDI4_360079 NZ_CAJZAS010000190.1 Protein Homology CDS 78328 78870 . - 0 ID=cds-WP_059534864.1;Parent=gene-LDO45_RS18425;Dbxref=GenBank:WP_059534864.1;Name=WP_059534864.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214382.1;locus_tag=LDO45_RS18425;product=spermidine N1-acetyltransferase;protein_id=WP_059534864.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 79022 79192 . + . ID=gene-LDO45_RS18430;Name=LDO45_RS18430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18430;old_locus_tag=BDI4_360080 NZ_CAJZAS010000190.1 Protein Homology CDS 79022 79192 . + 0 ID=cds-WP_223962872.1;Parent=gene-LDO45_RS18430;Dbxref=GenBank:WP_223962872.1;Name=WP_223962872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010113186.1;locus_tag=LDO45_RS18430;product=hypothetical protein;protein_id=WP_223962872.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 79298 79546 . + . ID=gene-LDO45_RS18435;Name=LDO45_RS18435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18435;old_locus_tag=BDI4_360081 NZ_CAJZAS010000190.1 Protein Homology CDS 79298 79546 . + 0 ID=cds-WP_223962874.1;Parent=gene-LDO45_RS18435;Dbxref=GenBank:WP_223962874.1;Name=WP_223962874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489924.1;locus_tag=LDO45_RS18435;product=DUF2795 domain-containing protein;protein_id=WP_223962874.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 79658 81016 . + . ID=gene-LDO45_RS18440;Name=LDO45_RS18440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18440;old_locus_tag=BDI4_360082 NZ_CAJZAS010000190.1 Protein Homology CDS 79658 81016 . + 0 ID=cds-WP_223962876.1;Parent=gene-LDO45_RS18440;Dbxref=GenBank:WP_223962876.1;Name=WP_223962876.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498694.1;locus_tag=LDO45_RS18440;product=diguanylate cyclase;protein_id=WP_223962876.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 81166 81291 . + . ID=gene-LDO45_RS34270;Name=LDO45_RS34270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34270 NZ_CAJZAS010000190.1 GeneMarkS-2+ CDS 81166 81291 . + 0 ID=cds-WP_256980637.1;Parent=gene-LDO45_RS34270;Dbxref=GenBank:WP_256980637.1;Name=WP_256980637.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34270;product=hypothetical protein;protein_id=WP_256980637.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 81391 82785 . - . ID=gene-LDO45_RS18445;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=LDO45_RS18445;old_locus_tag=BDI4_360083 NZ_CAJZAS010000190.1 Protein Homology CDS 81391 82785 . - 0 ID=cds-WP_223962878.1;Parent=gene-LDO45_RS18445;Dbxref=GenBank:WP_223962878.1;Name=WP_223962878.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041491300.1;locus_tag=LDO45_RS18445;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_223962878.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 83122 83559 . + . ID=gene-LDO45_RS18450;Name=LDO45_RS18450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18450;old_locus_tag=BDI4_360085 NZ_CAJZAS010000190.1 Protein Homology CDS 83122 83559 . + 0 ID=cds-WP_059534856.1;Parent=gene-LDO45_RS18450;Dbxref=GenBank:WP_059534856.1;Name=WP_059534856.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886455.1;locus_tag=LDO45_RS18450;product=helix-turn-helix domain-containing protein;protein_id=WP_059534856.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 83691 85346 . - . ID=gene-LDO45_RS18455;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=LDO45_RS18455;old_locus_tag=BDI4_360086 NZ_CAJZAS010000190.1 Protein Homology CDS 83691 85346 . - 0 ID=cds-WP_059534854.1;Parent=gene-LDO45_RS18455;Dbxref=GenBank:WP_059534854.1;Name=WP_059534854.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546513.1;locus_tag=LDO45_RS18455;product=membrane protein insertase YidC;protein_id=WP_059534854.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 85355 85621 . - . ID=gene-LDO45_RS18460;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=LDO45_RS18460;old_locus_tag=BDI4_360087 NZ_CAJZAS010000190.1 Protein Homology CDS 85355 85621 . - 0 ID=cds-WP_006750110.1;Parent=gene-LDO45_RS18460;Dbxref=GenBank:WP_006750110.1;Name=WP_006750110.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489939.1;locus_tag=LDO45_RS18460;product=membrane protein insertion efficiency factor YidD;protein_id=WP_006750110.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 85700 86161 . - . ID=gene-LDO45_RS18465;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=LDO45_RS18465;old_locus_tag=BDI4_360088 NZ_CAJZAS010000190.1 Protein Homology CDS 85700 86161 . - 0 ID=cds-WP_031401531.1;Parent=gene-LDO45_RS18465;Dbxref=GenBank:WP_031401531.1;Name=WP_031401531.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658267.1;locus_tag=LDO45_RS18465;product=ribonuclease P protein component;protein_id=WP_031401531.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 86177 86311 . - . ID=gene-LDO45_RS18470;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=LDO45_RS18470;old_locus_tag=BDI4_360089 NZ_CAJZAS010000190.1 Protein Homology CDS 86177 86311 . - 0 ID=cds-WP_004198824.1;Parent=gene-LDO45_RS18470;Dbxref=GenBank:WP_004198824.1;Name=WP_004198824.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003816025.1;locus_tag=LDO45_RS18470;product=50S ribosomal protein L34;protein_id=WP_004198824.1;transl_table=11 NZ_CAJZAS010000190.1 RefSeq gene 86734 87103 . + . ID=gene-LDO45_RS18475;Name=LDO45_RS18475;end_range=87103,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18475;partial=true NZ_CAJZAS010000190.1 Protein Homology CDS 86734 87103 . + 0 ID=cds-WP_290371023.1;Parent=gene-LDO45_RS18475;Dbxref=GenBank:WP_290371023.1;Name=WP_290371023.1;end_range=87103,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401751.1;locus_tag=LDO45_RS18475;partial=true;product=DnaA N-terminal domain-containing protein;protein_id=WP_290371023.1;transl_table=11 ##sequence-region NZ_CAJZAS010000191.1 1 14815 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000191.1 RefSeq region 1 14815 . + . ID=NZ_CAJZAS010000191.1:1..14815;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_37 NZ_CAJZAS010000191.1 RefSeq gene 1 1213 . + . ID=gene-LDO45_RS18480;Name=guaD;gbkey=Gene;gene=guaD;gene_biotype=protein_coding;locus_tag=LDO45_RS18480;old_locus_tag=BDI4_370001;partial=true;start_range=.,1 NZ_CAJZAS010000191.1 Protein Homology CDS 1 1213 . + 1 ID=cds-WP_223962884.1;Parent=gene-LDO45_RS18480;Dbxref=GenBank:WP_223962884.1;Name=WP_223962884.1;Ontology_term=GO:0006147,GO:0008270,GO:0008892;gbkey=CDS;gene=guaD;go_function=zinc ion binding|0008270||IEA,guanine deaminase activity|0008892||IEA;go_process=guanine catabolic process|0006147||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544860.1;locus_tag=LDO45_RS18480;partial=true;product=guanine deaminase;protein_id=WP_223962884.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000191.1 cmsearch riboswitch 1308 1432 . + . ID=id-NZ_CAJZAS010000191.1:1308..1432;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAS010000191.1 RefSeq gene 1524 2096 . + . ID=gene-LDO45_RS18485;Name=LDO45_RS18485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18485;old_locus_tag=BDI4_370002 NZ_CAJZAS010000191.1 Protein Homology CDS 1524 2096 . + 0 ID=cds-WP_223962886.1;Parent=gene-LDO45_RS18485;Dbxref=GenBank:WP_223962886.1;Name=WP_223962886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883765.1;locus_tag=LDO45_RS18485;product=TMEM165/GDT1 family protein;protein_id=WP_223962886.1;transl_table=11 NZ_CAJZAS010000191.1 RefSeq gene 2149 2850 . - . ID=gene-LDO45_RS18490;Name=LDO45_RS18490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18490;old_locus_tag=BDI4_370003 NZ_CAJZAS010000191.1 Protein Homology CDS 2149 2850 . - 0 ID=cds-WP_059816276.1;Parent=gene-LDO45_RS18490;Dbxref=GenBank:WP_059816276.1;Name=WP_059816276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753214.1;locus_tag=LDO45_RS18490;product=DUF4136 domain-containing protein;protein_id=WP_059816276.1;transl_table=11 NZ_CAJZAS010000191.1 RefSeq gene 3037 5730 . + . ID=gene-LDO45_RS18495;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=LDO45_RS18495;old_locus_tag=BDI4_370004 NZ_CAJZAS010000191.1 Protein Homology CDS 3037 5730 . + 0 ID=cds-WP_223962888.1;Parent=gene-LDO45_RS18495;Dbxref=GenBank:WP_223962888.1;Name=WP_223962888.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189239.1;locus_tag=LDO45_RS18495;product=aminopeptidase N;protein_id=WP_223962888.1;transl_table=11 NZ_CAJZAS010000191.1 RefSeq gene 6020 7039 . + . ID=gene-LDO45_RS18500;Name=LDO45_RS18500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18500;old_locus_tag=BDI4_370005 NZ_CAJZAS010000191.1 Protein Homology CDS 6020 7039 . + 0 ID=cds-WP_059530086.1;Parent=gene-LDO45_RS18500;Dbxref=GenBank:WP_059530086.1;Name=WP_059530086.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753216.1;locus_tag=LDO45_RS18500;product=class 1 fructose-bisphosphatase;protein_id=WP_059530086.1;transl_table=11 NZ_CAJZAS010000191.1 RefSeq gene 7249 7324 . + . ID=gene-LDO45_RS18505;Name=LDO45_RS18505;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS18505;old_locus_tag=BDI4_TRNA12 NZ_CAJZAS010000191.1 tRNAscan-SE tRNA 7249 7324 . + . ID=rna-LDO45_RS18505;Parent=gene-LDO45_RS18505;anticodon=(pos:7282..7284);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS18505;product=tRNA-Thr NZ_CAJZAS010000191.1 tRNAscan-SE exon 7249 7324 . + . ID=exon-LDO45_RS18505-1;Parent=rna-LDO45_RS18505;anticodon=(pos:7282..7284);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS18505;product=tRNA-Thr NZ_CAJZAS010000191.1 RefSeq gene 7503 8312 . + . ID=gene-LDO45_RS18510;Name=LDO45_RS18510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18510;old_locus_tag=BDI4_370006 NZ_CAJZAS010000191.1 Protein Homology CDS 7503 8312 . + 0 ID=cds-WP_059816283.1;Parent=gene-LDO45_RS18510;Dbxref=GenBank:WP_059816283.1;Name=WP_059816283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756202.1;locus_tag=LDO45_RS18510;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_059816283.1;transl_table=11 NZ_CAJZAS010000191.1 RefSeq gene 8488 10233 . + . ID=gene-LDO45_RS18515;Name=LDO45_RS18515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18515;old_locus_tag=BDI4_370007 NZ_CAJZAS010000191.1 Protein Homology CDS 8488 10233 . + 0 ID=cds-WP_223962890.1;Parent=gene-LDO45_RS18515;Dbxref=GenBank:WP_223962890.1;Name=WP_223962890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753218.1;locus_tag=LDO45_RS18515;product=FAD-dependent oxidoreductase;protein_id=WP_223962890.1;transl_table=11 NZ_CAJZAS010000191.1 RefSeq gene 10230 10442 . + . ID=gene-LDO45_RS18520;Name=LDO45_RS18520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18520;old_locus_tag=BDI4_370008 NZ_CAJZAS010000191.1 Protein Homology CDS 10230 10442 . + 0 ID=cds-WP_059530094.1;Parent=gene-LDO45_RS18520;Dbxref=GenBank:WP_059530094.1;Name=WP_059530094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485726.1;locus_tag=LDO45_RS18520;product=hypothetical protein;protein_id=WP_059530094.1;transl_table=11 NZ_CAJZAS010000191.1 RefSeq gene 10657 10911 . + . ID=gene-LDO45_RS18525;Name=LDO45_RS18525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18525;old_locus_tag=BDI4_370009 NZ_CAJZAS010000191.1 Protein Homology CDS 10657 10911 . + 0 ID=cds-WP_059530096.1;Parent=gene-LDO45_RS18525;Dbxref=GenBank:WP_059530096.1;Name=WP_059530096.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897763.1;locus_tag=LDO45_RS18525;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_059530096.1;transl_table=11 NZ_CAJZAS010000191.1 RefSeq gene 11000 11482 . - . ID=gene-LDO45_RS18530;Name=LDO45_RS18530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18530;old_locus_tag=BDI4_370010 NZ_CAJZAS010000191.1 Protein Homology CDS 11000 11482 . - 0 ID=cds-WP_059690805.1;Parent=gene-LDO45_RS18530;Dbxref=GenBank:WP_059690805.1;Name=WP_059690805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897764.1;locus_tag=LDO45_RS18530;product=TlpA disulfide reductase family protein;protein_id=WP_059690805.1;transl_table=11 NZ_CAJZAS010000191.1 RefSeq gene 11479 12738 . - . ID=gene-LDO45_RS18535;Name=LDO45_RS18535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18535;old_locus_tag=BDI4_370011 NZ_CAJZAS010000191.1 Protein Homology CDS 11479 12738 . - 0 ID=cds-WP_223962893.1;Parent=gene-LDO45_RS18535;Dbxref=GenBank:WP_223962893.1;Name=WP_223962893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897765.1;locus_tag=LDO45_RS18535;product=sialidase family protein;protein_id=WP_223962893.1;transl_table=11 NZ_CAJZAS010000191.1 RefSeq gene 12726 14815 . - . ID=gene-LDO45_RS18540;Name=LDO45_RS18540;end_range=14815,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18540;old_locus_tag=BDI4_370012;partial=true NZ_CAJZAS010000191.1 Protein Homology CDS 12726 14815 . - 2 ID=cds-WP_223962895.1;Parent=gene-LDO45_RS18540;Dbxref=GenBank:WP_223962895.1;Name=WP_223962895.1;Ontology_term=GO:0009279,GO:0016020;end_range=14815,.;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656231.1;locus_tag=LDO45_RS18540;partial=true;product=TonB-dependent receptor;protein_id=WP_223962895.1;transl_table=11 ##sequence-region NZ_CAJZAS010000192.1 1 138922 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000192.1 RefSeq region 1 138922 . + . ID=NZ_CAJZAS010000192.1:1..138922;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_38 NZ_CAJZAS010000192.1 RefSeq gene 1 1322 . + . ID=gene-LDO45_RS18545;Name=LDO45_RS18545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18545;old_locus_tag=BDI4_380001;partial=true;start_range=.,1 NZ_CAJZAS010000192.1 Protein Homology CDS 1 1322 . + 2 ID=cds-WP_223962897.1;Parent=gene-LDO45_RS18545;Dbxref=GenBank:WP_223962897.1;Name=WP_223962897.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004556790.1;locus_tag=LDO45_RS18545;partial=true;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_223962897.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 1346 1897 . + . ID=gene-LDO45_RS18550;Name=LDO45_RS18550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18550;old_locus_tag=BDI4_380002 NZ_CAJZAS010000192.1 Protein Homology CDS 1346 1897 . + 0 ID=cds-WP_223962899.1;Parent=gene-LDO45_RS18550;Dbxref=GenBank:WP_223962899.1;Name=WP_223962899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758108.1;locus_tag=LDO45_RS18550;product=hypothetical protein;protein_id=WP_223962899.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 2125 3075 . - . ID=gene-LDO45_RS18555;Name=LDO45_RS18555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18555;old_locus_tag=BDI4_380003 NZ_CAJZAS010000192.1 Protein Homology CDS 2125 3075 . - 0 ID=cds-WP_059532282.1;Parent=gene-LDO45_RS18555;Dbxref=GenBank:WP_059532282.1;Name=WP_059532282.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330573.1;locus_tag=LDO45_RS18555;product=LysR family transcriptional regulator;protein_id=WP_059532282.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 3303 4331 . + . ID=gene-LDO45_RS18560;Name=LDO45_RS18560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18560;old_locus_tag=BDI4_380004 NZ_CAJZAS010000192.1 Protein Homology CDS 3303 4331 . + 0 ID=cds-WP_059532279.1;Parent=gene-LDO45_RS18560;Dbxref=GenBank:WP_059532279.1;Name=WP_059532279.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330572.1;locus_tag=LDO45_RS18560;product=DUF1338 domain-containing protein;protein_id=WP_059532279.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 4557 4754 . - . ID=gene-LDO45_RS18565;Name=LDO45_RS18565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18565;old_locus_tag=BDI4_380008 NZ_CAJZAS010000192.1 Protein Homology CDS 4557 4754 . - 0 ID=cds-WP_059532275.1;Parent=gene-LDO45_RS18565;Dbxref=GenBank:WP_059532275.1;Name=WP_059532275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397770.1;locus_tag=LDO45_RS18565;product=CsbD family protein;protein_id=WP_059532275.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 4808 5155 . - . ID=gene-LDO45_RS18570;Name=LDO45_RS18570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18570;old_locus_tag=BDI4_380009 NZ_CAJZAS010000192.1 Protein Homology CDS 4808 5155 . - 0 ID=cds-WP_223962901.1;Parent=gene-LDO45_RS18570;Dbxref=GenBank:WP_223962901.1;Name=WP_223962901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749572.1;locus_tag=LDO45_RS18570;product=BON domain-containing protein;protein_id=WP_223962901.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 5213 5377 . - . ID=gene-LDO45_RS18575;Name=LDO45_RS18575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18575;old_locus_tag=BDI4_380010 NZ_CAJZAS010000192.1 Protein Homology CDS 5213 5377 . - 0 ID=cds-WP_167357956.1;Parent=gene-LDO45_RS18575;Dbxref=GenBank:WP_167357956.1;Name=WP_167357956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484627.1;locus_tag=LDO45_RS18575;product=hypothetical protein;protein_id=WP_167357956.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 5763 7307 . + . ID=gene-LDO45_RS18580;Name=LDO45_RS18580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18580;old_locus_tag=BDI4_380011 NZ_CAJZAS010000192.1 Protein Homology CDS 5763 7307 . + 0 ID=cds-WP_223962903.1;Parent=gene-LDO45_RS18580;Dbxref=GenBank:WP_223962903.1;Name=WP_223962903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479801.1;locus_tag=LDO45_RS18580;product=helix-turn-helix transcriptional regulator;protein_id=WP_223962903.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 7463 7654 . + . ID=gene-LDO45_RS18585;Name=LDO45_RS18585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18585;old_locus_tag=BDI4_380012 NZ_CAJZAS010000192.1 Protein Homology CDS 7463 7654 . + 0 ID=cds-WP_059532268.1;Parent=gene-LDO45_RS18585;Dbxref=GenBank:WP_059532268.1;Name=WP_059532268.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694517.1;locus_tag=LDO45_RS18585;product=CsbD family protein;protein_id=WP_059532268.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 8083 9234 . + . ID=gene-LDO45_RS18590;Name=LDO45_RS18590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18590;old_locus_tag=BDI4_380013 NZ_CAJZAS010000192.1 Protein Homology CDS 8083 9234 . + 0 ID=cds-WP_059532266.1;Parent=gene-LDO45_RS18590;Dbxref=GenBank:WP_059532266.1;Name=WP_059532266.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217652.1;locus_tag=LDO45_RS18590;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_059532266.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 9429 10601 . + . ID=gene-LDO45_RS18595;Name=LDO45_RS18595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18595;old_locus_tag=BDI4_380014 NZ_CAJZAS010000192.1 Protein Homology CDS 9429 10601 . + 0 ID=cds-WP_223962905.1;Parent=gene-LDO45_RS18595;Dbxref=GenBank:WP_223962905.1;Name=WP_223962905.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356268.1;locus_tag=LDO45_RS18595;product=FAD-binding oxidoreductase;protein_id=WP_223962905.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 10726 11298 . - . ID=gene-LDO45_RS18600;Name=LDO45_RS18600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18600;old_locus_tag=BDI4_380015 NZ_CAJZAS010000192.1 Protein Homology CDS 10726 11298 . - 0 ID=cds-WP_059690383.1;Parent=gene-LDO45_RS18600;Dbxref=GenBank:WP_059690383.1;Name=WP_059690383.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756989.1;locus_tag=LDO45_RS18600;product=PAS and helix-turn-helix domain-containing protein;protein_id=WP_059690383.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 11404 12750 . - . ID=gene-LDO45_RS18605;Name=LDO45_RS18605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18605;old_locus_tag=BDI4_380016 NZ_CAJZAS010000192.1 Protein Homology CDS 11404 12750 . - 0 ID=cds-WP_223962907.1;Parent=gene-LDO45_RS18605;Dbxref=GenBank:WP_223962907.1;Name=WP_223962907.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365331.1;locus_tag=LDO45_RS18605;product=MFS transporter;protein_id=WP_223962907.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 12960 13673 . - . ID=gene-LDO45_RS18610;Name=LDO45_RS18610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18610;old_locus_tag=BDI4_380017 NZ_CAJZAS010000192.1 Protein Homology CDS 12960 13673 . - 0 ID=cds-WP_059532258.1;Parent=gene-LDO45_RS18610;Dbxref=GenBank:WP_059532258.1;Name=WP_059532258.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756992.1;locus_tag=LDO45_RS18610;product=LuxR family transcriptional regulator;protein_id=WP_059532258.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 14182 14565 . + . ID=gene-LDO45_RS18615;Name=LDO45_RS18615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18615;old_locus_tag=BDI4_380019 NZ_CAJZAS010000192.1 Protein Homology CDS 14182 14565 . + 0 ID=cds-WP_059532255.1;Parent=gene-LDO45_RS18615;Dbxref=GenBank:WP_059532255.1;Name=WP_059532255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756993.1;locus_tag=LDO45_RS18615;product=DUF4902 domain-containing protein;protein_id=WP_059532255.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 15006 15614 . + . ID=gene-LDO45_RS18620;Name=LDO45_RS18620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18620;old_locus_tag=BDI4_380020 NZ_CAJZAS010000192.1 Protein Homology CDS 15006 15614 . + 0 ID=cds-WP_223962909.1;Parent=gene-LDO45_RS18620;Dbxref=GenBank:WP_223962909.1;Name=WP_223962909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881339.1;locus_tag=LDO45_RS18620;product=acyl-homoserine-lactone synthase;protein_id=WP_223962909.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 15710 17002 . + . ID=gene-LDO45_RS18625;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=LDO45_RS18625;old_locus_tag=BDI4_380022 NZ_CAJZAS010000192.1 Protein Homology CDS 15710 17002 . + 0 ID=cds-WP_223962911.1;Parent=gene-LDO45_RS18625;Dbxref=GenBank:WP_223962911.1;Name=WP_223962911.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756995.1;locus_tag=LDO45_RS18625;product=beta-ketoacyl-ACP synthase II;protein_id=WP_223962911.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 17174 18559 . + . ID=gene-LDO45_RS18630;Name=LDO45_RS18630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18630;old_locus_tag=BDI4_380023 NZ_CAJZAS010000192.1 Protein Homology CDS 17174 18559 . + 0 ID=cds-WP_223962913.1;Parent=gene-LDO45_RS18630;Dbxref=GenBank:WP_223962913.1;Name=WP_223962913.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749596.1;locus_tag=LDO45_RS18630;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_223962913.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 18668 19750 . + . ID=gene-LDO45_RS18635;Name=LDO45_RS18635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18635;old_locus_tag=BDI4_380024 NZ_CAJZAS010000192.1 Protein Homology CDS 18668 19750 . + 0 ID=cds-WP_223962915.1;Parent=gene-LDO45_RS18635;Dbxref=GenBank:WP_223962915.1;Name=WP_223962915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756997.1;locus_tag=LDO45_RS18635;product=fatty acid desaturase;protein_id=WP_223962915.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 19829 20833 . + . ID=gene-LDO45_RS18640;Name=LDO45_RS18640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18640;old_locus_tag=BDI4_380025 NZ_CAJZAS010000192.1 Protein Homology CDS 19829 20833 . + 0 ID=cds-WP_059690377.1;Parent=gene-LDO45_RS18640;Dbxref=GenBank:WP_059690377.1;Name=WP_059690377.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756998.1;locus_tag=LDO45_RS18640;product=aromatic ring-hydroxylating dioxygenase subunit alpha;protein_id=WP_059690377.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 20830 21735 . + . ID=gene-LDO45_RS18645;Name=LDO45_RS18645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18645;old_locus_tag=BDI4_380026 NZ_CAJZAS010000192.1 Protein Homology CDS 20830 21735 . + 0 ID=cds-WP_223962917.1;Parent=gene-LDO45_RS18645;Dbxref=GenBank:WP_223962917.1;Name=WP_223962917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724440.1;locus_tag=LDO45_RS18645;product=hypothetical protein;protein_id=WP_223962917.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 21740 23158 . + . ID=gene-LDO45_RS18650;Name=LDO45_RS18650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18650;old_locus_tag=BDI4_380027 NZ_CAJZAS010000192.1 Protein Homology CDS 21740 23158 . + 0 ID=cds-WP_059532238.1;Parent=gene-LDO45_RS18650;Dbxref=GenBank:WP_059532238.1;Name=WP_059532238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881345.1;locus_tag=LDO45_RS18650;product=MFS transporter;protein_id=WP_059532238.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 23232 25025 . + . ID=gene-LDO45_RS18655;Name=LDO45_RS18655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18655;old_locus_tag=BDI4_380028 NZ_CAJZAS010000192.1 Protein Homology CDS 23232 25025 . + 0 ID=cds-WP_223962919.1;Parent=gene-LDO45_RS18655;Dbxref=GenBank:WP_223962919.1;Name=WP_223962919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749601.1;locus_tag=LDO45_RS18655;product=fatty acyl-AMP ligase;protein_id=WP_223962919.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 25075 26034 . + . ID=gene-LDO45_RS18660;Name=LDO45_RS18660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18660;old_locus_tag=BDI4_380030 NZ_CAJZAS010000192.1 Protein Homology CDS 25075 26034 . + 0 ID=cds-WP_223962920.1;Parent=gene-LDO45_RS18660;Dbxref=GenBank:WP_223962920.1;Name=WP_223962920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757002.1;locus_tag=LDO45_RS18660;product=acyl-CoA desaturase;protein_id=WP_223962920.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 26059 27042 . + . ID=gene-LDO45_RS18665;Name=LDO45_RS18665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18665;old_locus_tag=BDI4_380031 NZ_CAJZAS010000192.1 Protein Homology CDS 26059 27042 . + 0 ID=cds-WP_059532232.1;Parent=gene-LDO45_RS18665;Dbxref=GenBank:WP_059532232.1;Name=WP_059532232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724444.1;locus_tag=LDO45_RS18665;product=acyl-CoA desaturase;protein_id=WP_059532232.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 27098 27418 . + . ID=gene-LDO45_RS18670;Name=LDO45_RS18670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18670;old_locus_tag=BDI4_380032 NZ_CAJZAS010000192.1 Protein Homology CDS 27098 27418 . + 0 ID=cds-WP_059532229.1;Parent=gene-LDO45_RS18670;Dbxref=GenBank:WP_059532229.1;Name=WP_059532229.1;Ontology_term=GO:0006633,GO:0000035,GO:0000036;gbkey=CDS;go_function=acyl binding|0000035||IEA,acyl carrier activity|0000036||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749604.1;locus_tag=LDO45_RS18670;product=acyl carrier protein;protein_id=WP_059532229.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 27432 28529 . + . ID=gene-LDO45_RS18675;Name=LDO45_RS18675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18675;old_locus_tag=BDI4_380033 NZ_CAJZAS010000192.1 Protein Homology CDS 27432 28529 . + 0 ID=cds-WP_223962922.1;Parent=gene-LDO45_RS18675;Dbxref=GenBank:WP_223962922.1;Name=WP_223962922.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014005066.1;locus_tag=LDO45_RS18675;product=fatty acid desaturase;protein_id=WP_223962922.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 28529 29452 . + . ID=gene-LDO45_RS18680;Name=LDO45_RS18680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18680;old_locus_tag=BDI4_380034 NZ_CAJZAS010000192.1 Protein Homology CDS 28529 29452 . + 0 ID=cds-WP_223962924.1;Parent=gene-LDO45_RS18680;Dbxref=GenBank:WP_223962924.1;Name=WP_223962924.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757005.1;locus_tag=LDO45_RS18680;product=alpha/beta hydrolase;protein_id=WP_223962924.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 29449 29634 . + . ID=gene-LDO45_RS18685;Name=LDO45_RS18685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18685;old_locus_tag=BDI4_380035 NZ_CAJZAS010000192.1 Protein Homology CDS 29449 29634 . + 0 ID=cds-WP_059532220.1;Parent=gene-LDO45_RS18685;Dbxref=GenBank:WP_059532220.1;Name=WP_059532220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749607.1;locus_tag=LDO45_RS18685;product=rubredoxin;protein_id=WP_059532220.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 29796 30980 . + . ID=gene-LDO45_RS18690;Name=LDO45_RS18690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18690;old_locus_tag=BDI4_380036 NZ_CAJZAS010000192.1 Protein Homology CDS 29796 30980 . + 0 ID=cds-WP_223962925.1;Parent=gene-LDO45_RS18690;Dbxref=GenBank:WP_223962925.1;Name=WP_223962925.1;Ontology_term=GO:0006631,GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881353.1;locus_tag=LDO45_RS18690;product=thiolase family protein;protein_id=WP_223962925.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 31041 31229 . + . ID=gene-LDO45_RS18695;Name=LDO45_RS18695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18695;old_locus_tag=BDI4_380037 NZ_CAJZAS010000192.1 Protein Homology CDS 31041 31229 . + 0 ID=cds-WP_059532213.1;Parent=gene-LDO45_RS18695;Dbxref=GenBank:WP_059532213.1;Name=WP_059532213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749609.1;locus_tag=LDO45_RS18695;product=hypothetical protein;protein_id=WP_059532213.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 31354 31818 . - . ID=gene-LDO45_RS18700;Name=LDO45_RS18700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18700;old_locus_tag=BDI4_380038 NZ_CAJZAS010000192.1 Protein Homology CDS 31354 31818 . - 0 ID=cds-WP_223962926.1;Parent=gene-LDO45_RS18700;Dbxref=GenBank:WP_223962926.1;Name=WP_223962926.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880551.1;locus_tag=LDO45_RS18700;product=GtrA family protein;protein_id=WP_223962926.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 31803 33527 . - . ID=gene-LDO45_RS18705;Name=LDO45_RS18705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18705;old_locus_tag=BDI4_380039 NZ_CAJZAS010000192.1 Protein Homology CDS 31803 33527 . - 0 ID=cds-WP_223962927.1;Parent=gene-LDO45_RS18705;Dbxref=GenBank:WP_223962927.1;Name=WP_223962927.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880550.1;locus_tag=LDO45_RS18705;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_223962927.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 33415 35382 . - . ID=gene-LDO45_RS18710;Name=LDO45_RS18710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18710;old_locus_tag=BDI4_380040 NZ_CAJZAS010000192.1 Protein Homology CDS 33415 35382 . - 0 ID=cds-WP_223962928.1;Parent=gene-LDO45_RS18710;Dbxref=GenBank:WP_223962928.1;Name=WP_223962928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726193.1;locus_tag=LDO45_RS18710;product=hypothetical protein;protein_id=WP_223962928.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 35356 35895 . + . ID=gene-LDO45_RS18715;Name=LDO45_RS18715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18715 NZ_CAJZAS010000192.1 GeneMarkS-2+ CDS 35356 35895 . + 0 ID=cds-WP_223962929.1;Parent=gene-LDO45_RS18715;Dbxref=GenBank:WP_223962929.1;Name=WP_223962929.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS18715;product=hypothetical protein;protein_id=WP_223962929.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 35988 36488 . + . ID=gene-LDO45_RS18720;Name=LDO45_RS18720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18720 NZ_CAJZAS010000192.1 GeneMarkS-2+ CDS 35988 36488 . + 0 ID=cds-WP_223962930.1;Parent=gene-LDO45_RS18720;Dbxref=GenBank:WP_223962930.1;Name=WP_223962930.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS18720;product=hypothetical protein;protein_id=WP_223962930.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 36618 37817 . + . ID=gene-LDO45_RS18725;Name=LDO45_RS18725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18725;old_locus_tag=BDI4_380043 NZ_CAJZAS010000192.1 Protein Homology CDS 36618 37817 . + 0 ID=cds-WP_223962932.1;Parent=gene-LDO45_RS18725;Dbxref=GenBank:WP_223962932.1;Name=WP_223962932.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365333.1;locus_tag=LDO45_RS18725;product=PLP-dependent aminotransferase family protein;protein_id=WP_223962932.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 37831 38019 . + . ID=gene-LDO45_RS18730;Name=LDO45_RS18730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18730;old_locus_tag=BDI4_380044 NZ_CAJZAS010000192.1 Protein Homology CDS 37831 38019 . + 0 ID=cds-WP_059532195.1;Parent=gene-LDO45_RS18730;Dbxref=GenBank:WP_059532195.1;Name=WP_059532195.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365334.1;locus_tag=LDO45_RS18730;product=hypothetical protein;protein_id=WP_059532195.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 38107 38697 . + . ID=gene-LDO45_RS18735;Name=LDO45_RS18735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18735;old_locus_tag=BDI4_380045 NZ_CAJZAS010000192.1 Protein Homology CDS 38107 38697 . + 0 ID=cds-WP_223962934.1;Parent=gene-LDO45_RS18735;Dbxref=GenBank:WP_223962934.1;Name=WP_223962934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900347.1;locus_tag=LDO45_RS18735;product=pyridoxamine 5'-phosphate oxidase family protein;protein_id=WP_223962934.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 38870 40147 . + . ID=gene-LDO45_RS18740;Name=LDO45_RS18740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18740;old_locus_tag=BDI4_380046 NZ_CAJZAS010000192.1 Protein Homology CDS 38870 40147 . + 0 ID=cds-WP_059532189.1;Parent=gene-LDO45_RS18740;Dbxref=GenBank:WP_059532189.1;Name=WP_059532189.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365336.1;locus_tag=LDO45_RS18740;product=epoxide hydrolase family protein;protein_id=WP_059532189.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 40436 41479 . + . ID=gene-LDO45_RS18745;Name=LDO45_RS18745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18745;old_locus_tag=BDI4_380047 NZ_CAJZAS010000192.1 Protein Homology CDS 40436 41479 . + 0 ID=cds-WP_223962936.1;Parent=gene-LDO45_RS18745;Dbxref=GenBank:WP_223962936.1;Name=WP_223962936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900344.1;locus_tag=LDO45_RS18745;product=alpha/beta fold hydrolase;protein_id=WP_223962936.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 41479 42015 . + . ID=gene-LDO45_RS18750;Name=LDO45_RS18750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18750;old_locus_tag=BDI4_380048 NZ_CAJZAS010000192.1 Protein Homology CDS 41479 42015 . + 0 ID=cds-WP_059702865.1;Parent=gene-LDO45_RS18750;Dbxref=GenBank:WP_059702865.1;Name=WP_059702865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416412.1;locus_tag=LDO45_RS18750;product=cytochrome P460 family protein;protein_id=WP_059702865.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 42295 42654 . + . ID=gene-LDO45_RS18755;Name=LDO45_RS18755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18755;old_locus_tag=BDI4_380049 NZ_CAJZAS010000192.1 Protein Homology CDS 42295 42654 . + 0 ID=cds-WP_223962937.1;Parent=gene-LDO45_RS18755;Dbxref=GenBank:WP_223962937.1;Name=WP_223962937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479766.1;locus_tag=LDO45_RS18755;product=DUF4148 domain-containing protein;protein_id=WP_223962937.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 42737 43528 . + . ID=gene-LDO45_RS18760;Name=LDO45_RS18760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18760;old_locus_tag=BDI4_380050 NZ_CAJZAS010000192.1 Protein Homology CDS 42737 43528 . + 0 ID=cds-WP_223963029.1;Parent=gene-LDO45_RS18760;Dbxref=GenBank:WP_223963029.1;Name=WP_223963029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484617.1;locus_tag=LDO45_RS18760;product=alpha/beta fold hydrolase;protein_id=WP_223963029.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 43601 45004 . + . ID=gene-LDO45_RS18765;Name=LDO45_RS18765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18765;old_locus_tag=BDI4_380051 NZ_CAJZAS010000192.1 Protein Homology CDS 43601 45004 . + 0 ID=cds-WP_223962938.1;Parent=gene-LDO45_RS18765;Dbxref=GenBank:WP_223962938.1;Name=WP_223962938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766821.1;locus_tag=LDO45_RS18765;product=amidase family protein;protein_id=WP_223962938.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 45443 45913 . + . ID=gene-LDO45_RS18770;Name=LDO45_RS18770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18770;old_locus_tag=BDI4_380052 NZ_CAJZAS010000192.1 Protein Homology CDS 45443 45913 . + 0 ID=cds-WP_059449206.1;Parent=gene-LDO45_RS18770;Dbxref=GenBank:WP_059449206.1;Name=WP_059449206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495730.1;locus_tag=LDO45_RS18770;product=rhodanese-like domain-containing protein;protein_id=WP_059449206.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 45942 46901 . + . ID=gene-LDO45_RS18775;Name=epsC;gbkey=Gene;gene=epsC;gene_biotype=protein_coding;locus_tag=LDO45_RS18775;old_locus_tag=BDI4_380053 NZ_CAJZAS010000192.1 Protein Homology CDS 45942 46901 . + 0 ID=cds-WP_059449205.1;Parent=gene-LDO45_RS18775;Dbxref=GenBank:WP_059449205.1;Name=WP_059449205.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=epsC;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900339.1;locus_tag=LDO45_RS18775;product=serine O-acetyltransferase EpsC;protein_id=WP_059449205.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 46898 47119 . + . ID=gene-LDO45_RS18780;Name=LDO45_RS18780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18780;old_locus_tag=BDI4_380054 NZ_CAJZAS010000192.1 Protein Homology CDS 46898 47119 . + 0 ID=cds-WP_006749621.1;Parent=gene-LDO45_RS18780;Dbxref=GenBank:WP_006749621.1;Name=WP_006749621.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356215.1;locus_tag=LDO45_RS18780;product=helix-turn-helix domain-containing protein;protein_id=WP_006749621.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 47255 48187 . + . ID=gene-LDO45_RS18785;Name=LDO45_RS18785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18785;old_locus_tag=BDI4_380055 NZ_CAJZAS010000192.1 Protein Homology CDS 47255 48187 . + 0 ID=cds-WP_034205507.1;Parent=gene-LDO45_RS18785;Dbxref=GenBank:WP_034205507.1;Name=WP_034205507.1;Ontology_term=GO:0140737;gbkey=CDS;go_component=encapsulin nanocompartment|0140737||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006157090.1;locus_tag=LDO45_RS18785;product=family 2A encapsulin nanocompartment shell protein;protein_id=WP_034205507.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 48162 50174 . + . ID=gene-LDO45_RS18790;Name=LDO45_RS18790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18790;old_locus_tag=BDI4_380056 NZ_CAJZAS010000192.1 Protein Homology CDS 48162 50174 . + 0 ID=cds-WP_223962939.1;Parent=gene-LDO45_RS18790;Dbxref=GenBank:WP_223962939.1;Name=WP_223962939.1;Ontology_term=GO:0140737;gbkey=CDS;go_component=encapsulin nanocompartment|0140737||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338738.1;locus_tag=LDO45_RS18790;product=family 2A encapsulin nanocompartment cargo protein cysteine desulfurase;protein_id=WP_223962939.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 50268 50882 . - . ID=gene-LDO45_RS18795;Name=LDO45_RS18795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18795;old_locus_tag=BDI4_380057 NZ_CAJZAS010000192.1 Protein Homology CDS 50268 50882 . - 0 ID=cds-WP_223962942.1;Parent=gene-LDO45_RS18795;Dbxref=GenBank:WP_223962942.1;Name=WP_223962942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900334.1;locus_tag=LDO45_RS18795;product=LysE family translocator;protein_id=WP_223962942.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 51110 52261 . + . ID=gene-LDO45_RS18800;Name=LDO45_RS18800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18800;old_locus_tag=BDI4_380059 NZ_CAJZAS010000192.1 Protein Homology CDS 51110 52261 . + 0 ID=cds-WP_059702853.1;Parent=gene-LDO45_RS18800;Dbxref=GenBank:WP_059702853.1;Name=WP_059702853.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900333.1;locus_tag=LDO45_RS18800;product=porin;protein_id=WP_059702853.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 52373 54013 . - . ID=gene-LDO45_RS18805;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=LDO45_RS18805;old_locus_tag=BDI4_380060 NZ_CAJZAS010000192.1 Protein Homology CDS 52373 54013 . - 0 ID=cds-WP_223962944.1;Parent=gene-LDO45_RS18805;Dbxref=GenBank:WP_223962944.1;Name=WP_223962944.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760091.1;locus_tag=LDO45_RS18805;product=chaperonin GroEL;protein_id=WP_223962944.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 54026 54316 . - . ID=gene-LDO45_RS18810;Name=LDO45_RS18810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18810;old_locus_tag=BDI4_380061 NZ_CAJZAS010000192.1 Protein Homology CDS 54026 54316 . - 0 ID=cds-WP_059532162.1;Parent=gene-LDO45_RS18810;Dbxref=GenBank:WP_059532162.1;Name=WP_059532162.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694564.1;locus_tag=LDO45_RS18810;product=co-chaperone GroES;protein_id=WP_059532162.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 54556 55575 . - . ID=gene-LDO45_RS18815;Name=LDO45_RS18815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18815;old_locus_tag=BDI4_380062 NZ_CAJZAS010000192.1 Protein Homology CDS 54556 55575 . - 0 ID=cds-WP_223962946.1;Parent=gene-LDO45_RS18815;Dbxref=GenBank:WP_223962946.1;Name=WP_223962946.1;Ontology_term=GO:0004024,GO:0008270,GO:0030554;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity%2C zinc-dependent|0004024||IEA,zinc ion binding|0008270||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881364.1;locus_tag=LDO45_RS18815;product=NAD(P)-dependent alcohol dehydrogenase;protein_id=WP_223962946.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 55703 56656 . + . ID=gene-LDO45_RS18820;Name=LDO45_RS18820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18820;old_locus_tag=BDI4_380063 NZ_CAJZAS010000192.1 Protein Homology CDS 55703 56656 . + 0 ID=cds-WP_223962947.1;Parent=gene-LDO45_RS18820;Dbxref=GenBank:WP_223962947.1;Name=WP_223962947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007881478.1;locus_tag=LDO45_RS18820;product=LysR family transcriptional regulator;protein_id=WP_223962947.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 56803 57522 . + . ID=gene-LDO45_RS18825;Name=LDO45_RS18825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18825;old_locus_tag=BDI4_380064 NZ_CAJZAS010000192.1 Protein Homology CDS 56803 57522 . + 0 ID=cds-WP_223962948.1;Parent=gene-LDO45_RS18825;Dbxref=GenBank:WP_223962948.1;Name=WP_223962948.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694582.1;locus_tag=LDO45_RS18825;product=SDR family oxidoreductase;protein_id=WP_223962948.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 57667 59616 . + . ID=gene-LDO45_RS18830;Name=LDO45_RS18830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18830;old_locus_tag=BDI4_380065 NZ_CAJZAS010000192.1 Protein Homology CDS 57667 59616 . + 0 ID=cds-WP_223962949.1;Parent=gene-LDO45_RS18830;Dbxref=GenBank:WP_223962949.1;Name=WP_223962949.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397804.1;locus_tag=LDO45_RS18830;product=arylsulfatase;protein_id=WP_223962949.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 59627 60676 . + . ID=gene-LDO45_RS18835;Name=LDO45_RS18835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18835;old_locus_tag=BDI4_380066 NZ_CAJZAS010000192.1 Protein Homology CDS 59627 60676 . + 0 ID=cds-WP_223962950.1;Parent=gene-LDO45_RS18835;Dbxref=GenBank:WP_223962950.1;Name=WP_223962950.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749633.1;locus_tag=LDO45_RS18835;product=formylglycine-generating enzyme family protein;protein_id=WP_223962950.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 60673 61482 . + . ID=gene-LDO45_RS18840;Name=LDO45_RS18840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18840;old_locus_tag=BDI4_380067 NZ_CAJZAS010000192.1 Protein Homology CDS 60673 61482 . + 0 ID=cds-WP_223962951.1;Parent=gene-LDO45_RS18840;Dbxref=GenBank:WP_223962951.1;Name=WP_223962951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365348.1;locus_tag=LDO45_RS18840;product=MetQ/NlpA family lipoprotein;protein_id=WP_223962951.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 61585 61911 . + . ID=gene-LDO45_RS18845;Name=LDO45_RS18845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18845;old_locus_tag=BDI4_380068 NZ_CAJZAS010000192.1 Protein Homology CDS 61585 61911 . + 0 ID=cds-WP_223962952.1;Parent=gene-LDO45_RS18845;Dbxref=GenBank:WP_223962952.1;Name=WP_223962952.1;Ontology_term=GO:0004497;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760101.1;locus_tag=LDO45_RS18845;product=antibiotic biosynthesis monooxygenase;protein_id=WP_223962952.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 61974 62906 . - . ID=gene-LDO45_RS18850;Name=LDO45_RS18850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18850;old_locus_tag=BDI4_380069 NZ_CAJZAS010000192.1 Protein Homology CDS 61974 62906 . - 0 ID=cds-WP_044847290.1;Parent=gene-LDO45_RS18850;Dbxref=GenBank:WP_044847290.1;Name=WP_044847290.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330520.1;locus_tag=LDO45_RS18850;product=LysR family transcriptional regulator;protein_id=WP_044847290.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 63109 63882 . + . ID=gene-LDO45_RS18855;Name=LDO45_RS18855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18855;old_locus_tag=BDI4_380070 NZ_CAJZAS010000192.1 Protein Homology CDS 63109 63882 . + 0 ID=cds-WP_059466092.1;Parent=gene-LDO45_RS18855;Dbxref=GenBank:WP_059466092.1;Name=WP_059466092.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694590.1;locus_tag=LDO45_RS18855;product=putative hydro-lyase;protein_id=WP_059466092.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 64063 65361 . + . ID=gene-LDO45_RS18860;Name=LDO45_RS18860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18860;old_locus_tag=BDI4_380071 NZ_CAJZAS010000192.1 Protein Homology CDS 64063 65361 . + 0 ID=cds-WP_223962954.1;Parent=gene-LDO45_RS18860;Dbxref=GenBank:WP_223962954.1;Name=WP_223962954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356167.1;locus_tag=LDO45_RS18860;product=MFS transporter;protein_id=WP_223962954.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 65483 69121 . + . ID=gene-LDO45_RS18865;Name=LDO45_RS18865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18865;old_locus_tag=BDI4_380072 NZ_CAJZAS010000192.1 Protein Homology CDS 65483 69121 . + 0 ID=cds-WP_223962956.1;Parent=gene-LDO45_RS18865;Dbxref=GenBank:WP_223962956.1;Name=WP_223962956.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749640.1;locus_tag=LDO45_RS18865;product=hydantoinase B/oxoprolinase family protein;protein_id=WP_223962956.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 69802 71805 . + . ID=gene-LDO45_RS18870;Name=pdeR;gbkey=Gene;gene=pdeR;gene_biotype=protein_coding;locus_tag=LDO45_RS18870;old_locus_tag=BDI4_380073 NZ_CAJZAS010000192.1 Protein Homology CDS 69802 71805 . + 0 ID=cds-WP_223962958.1;Parent=gene-LDO45_RS18870;Dbxref=GenBank:WP_223962958.1;Name=WP_223962958.1;gbkey=CDS;gene=pdeR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758253.1;locus_tag=LDO45_RS18870;product=cyclic di-GMP phosphodiesterase;protein_id=WP_223962958.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 71857 72720 . - . ID=gene-LDO45_RS18875;Name=LDO45_RS18875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18875;old_locus_tag=BDI4_380075 NZ_CAJZAS010000192.1 Protein Homology CDS 71857 72720 . - 0 ID=cds-WP_059532133.1;Parent=gene-LDO45_RS18875;Dbxref=GenBank:WP_059532133.1;Name=WP_059532133.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397815.1;locus_tag=LDO45_RS18875;product=crotonase/enoyl-CoA hydratase family protein;protein_id=WP_059532133.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 73183 75153 . + . ID=gene-LDO45_RS18880;Name=LDO45_RS18880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18880;old_locus_tag=BDI4_380077 NZ_CAJZAS010000192.1 Protein Homology CDS 73183 75153 . + 0 ID=cds-WP_223962959.1;Parent=gene-LDO45_RS18880;Dbxref=GenBank:WP_223962959.1;Name=WP_223962959.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010112116.1;locus_tag=LDO45_RS18880;product=APC family permease;protein_id=WP_223962959.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 75196 75441 . - . ID=gene-LDO45_RS18885;Name=LDO45_RS18885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18885 NZ_CAJZAS010000192.1 GeneMarkS-2+ CDS 75196 75441 . - 0 ID=cds-WP_156437333.1;Parent=gene-LDO45_RS18885;Dbxref=GenBank:WP_156437333.1;Name=WP_156437333.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS18885;product=hypothetical protein;protein_id=WP_156437333.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 75609 77495 . + . ID=gene-LDO45_RS18890;Name=LDO45_RS18890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18890;old_locus_tag=BDI4_380079 NZ_CAJZAS010000192.1 Protein Homology CDS 75609 77495 . + 0 ID=cds-WP_374109541.1;Parent=gene-LDO45_RS18890;Dbxref=GenBank:WP_374109541.1;Name=WP_374109541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356158.1;locus_tag=LDO45_RS18890;product=DUF3857 domain-containing transglutaminase family protein;protein_id=WP_374109541.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 77552 77719 . + . ID=gene-LDO45_RS18895;Name=LDO45_RS18895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18895;old_locus_tag=BDI4_380080 NZ_CAJZAS010000192.1 Protein Homology CDS 77552 77719 . + 0 ID=cds-WP_179949141.1;Parent=gene-LDO45_RS18895;Dbxref=GenBank:WP_179949141.1;Name=WP_179949141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749649.1;locus_tag=LDO45_RS18895;product=hypothetical protein;protein_id=WP_179949141.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 77813 78847 . - . ID=gene-LDO45_RS18900;Name=LDO45_RS18900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18900;old_locus_tag=BDI4_380081 NZ_CAJZAS010000192.1 Protein Homology CDS 77813 78847 . - 0 ID=cds-WP_059690345.1;Parent=gene-LDO45_RS18900;Dbxref=GenBank:WP_059690345.1;Name=WP_059690345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365359.1;locus_tag=LDO45_RS18900;product=AraC family transcriptional regulator;protein_id=WP_059690345.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 78918 80129 . + . ID=gene-LDO45_RS18905;Name=LDO45_RS18905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18905;old_locus_tag=BDI4_380082 NZ_CAJZAS010000192.1 Protein Homology CDS 78918 80129 . + 0 ID=cds-WP_223962963.1;Parent=gene-LDO45_RS18905;Dbxref=GenBank:WP_223962963.1;Name=WP_223962963.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881374.1;locus_tag=LDO45_RS18905;product=MFS transporter;protein_id=WP_223962963.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 80278 81045 . - . ID=gene-LDO45_RS18910;Name=LDO45_RS18910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18910;old_locus_tag=BDI4_380083 NZ_CAJZAS010000192.1 Protein Homology CDS 80278 81045 . - 0 ID=cds-WP_223962965.1;Parent=gene-LDO45_RS18910;Dbxref=GenBank:WP_223962965.1;Name=WP_223962965.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660215.1;locus_tag=LDO45_RS18910;product=isocitrate lyase/phosphoenolpyruvate mutase family protein;protein_id=WP_223962965.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 81032 82087 . - . ID=gene-LDO45_RS18915;Name=LDO45_RS18915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18915;old_locus_tag=BDI4_380084 NZ_CAJZAS010000192.1 Protein Homology CDS 81032 82087 . - 0 ID=cds-WP_223962967.1;Parent=gene-LDO45_RS18915;Dbxref=GenBank:WP_223962967.1;Name=WP_223962967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749653.1;locus_tag=LDO45_RS18915;product=trans-acting enoyl reductase family protein;protein_id=WP_223962967.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 82206 82799 . + . ID=gene-LDO45_RS18920;Name=LDO45_RS18920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18920;old_locus_tag=BDI4_380085 NZ_CAJZAS010000192.1 Protein Homology CDS 82206 82799 . + 0 ID=cds-WP_223962969.1;Parent=gene-LDO45_RS18920;Dbxref=GenBank:WP_223962969.1;Name=WP_223962969.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758264.1;locus_tag=LDO45_RS18920;product=TetR/AcrR family transcriptional regulator;protein_id=WP_223962969.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 82818 83285 . - . ID=gene-LDO45_RS18925;Name=LDO45_RS18925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18925;old_locus_tag=BDI4_380086 NZ_CAJZAS010000192.1 Protein Homology CDS 82818 83285 . - 0 ID=cds-WP_223962971.1;Parent=gene-LDO45_RS18925;Dbxref=GenBank:WP_223962971.1;Name=WP_223962971.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749655.1;locus_tag=LDO45_RS18925;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_223962971.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 83368 83736 . + . ID=gene-LDO45_RS18930;Name=LDO45_RS18930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18930;old_locus_tag=BDI4_380087 NZ_CAJZAS010000192.1 Protein Homology CDS 83368 83736 . + 0 ID=cds-WP_223962973.1;Parent=gene-LDO45_RS18930;Dbxref=GenBank:WP_223962973.1;Name=WP_223962973.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758266.1;locus_tag=LDO45_RS18930;product=hypothetical protein;protein_id=WP_223962973.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 83824 84441 . + . ID=gene-LDO45_RS18935;Name=LDO45_RS18935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18935;old_locus_tag=BDI4_380088 NZ_CAJZAS010000192.1 Protein Homology CDS 83824 84441 . + 0 ID=cds-WP_059690341.1;Parent=gene-LDO45_RS18935;Dbxref=GenBank:WP_059690341.1;Name=WP_059690341.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900310.1;locus_tag=LDO45_RS18935;product=glutathione S-transferase family protein;protein_id=WP_059690341.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 84514 85236 . - . ID=gene-LDO45_RS18940;Name=LDO45_RS18940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18940;old_locus_tag=BDI4_380089 NZ_CAJZAS010000192.1 Protein Homology CDS 84514 85236 . - 0 ID=cds-WP_223962975.1;Parent=gene-LDO45_RS18940;Dbxref=GenBank:WP_223962975.1;Name=WP_223962975.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749658.1;locus_tag=LDO45_RS18940;product=HAD family hydrolase;protein_id=WP_223962975.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq pseudogene 85266 85391 . - . ID=gene-LDO45_RS18945;Name=LDO45_RS18945;end_range=85391,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS18945;partial=true;pseudo=true NZ_CAJZAS010000192.1 Protein Homology CDS 85266 85391 . - 0 ID=cds-LDO45_RS18945;Parent=gene-LDO45_RS18945;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=85391,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694606.1;locus_tag=LDO45_RS18945;partial=true;product=ornithine cyclodeaminase family protein;pseudo=true;transl_table=11 NZ_CAJZAS010000192.1 RefSeq pseudogene 85418 85540 . + . ID=gene-LDO45_RS18950;Name=LDO45_RS18950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS18950;partial=true;pseudo=true;start_range=.,85418 NZ_CAJZAS010000192.1 Protein Homology CDS 85418 85540 . + 0 ID=cds-LDO45_RS18950;Parent=gene-LDO45_RS18950;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365374.1;locus_tag=LDO45_RS18950;partial=true;product=transcriptional regulator;pseudo=true;start_range=.,85418;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 85800 86399 . + . ID=gene-LDO45_RS18955;Name=LDO45_RS18955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18955;old_locus_tag=BDI4_380090 NZ_CAJZAS010000192.1 Protein Homology CDS 85800 86399 . + 0 ID=cds-WP_223962977.1;Parent=gene-LDO45_RS18955;Dbxref=GenBank:WP_223962977.1;Name=WP_223962977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493132.1;locus_tag=LDO45_RS18955;product=DUF2760 domain-containing protein;protein_id=WP_223962977.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 86396 88237 . + . ID=gene-LDO45_RS18960;Name=LDO45_RS18960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18960;old_locus_tag=BDI4_380091 NZ_CAJZAS010000192.1 Protein Homology CDS 86396 88237 . + 0 ID=cds-WP_223962979.1;Parent=gene-LDO45_RS18960;Dbxref=GenBank:WP_223962979.1;Name=WP_223962979.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694612.1;locus_tag=LDO45_RS18960;product=Hsp70 family protein;protein_id=WP_223962979.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 88243 90993 . + . ID=gene-LDO45_RS18965;Name=LDO45_RS18965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18965;old_locus_tag=BDI4_380092 NZ_CAJZAS010000192.1 Protein Homology CDS 88243 90993 . + 0 ID=cds-WP_223962981.1;Parent=gene-LDO45_RS18965;Dbxref=GenBank:WP_223962981.1;Name=WP_223962981.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900302.1;locus_tag=LDO45_RS18965;product=Hsp70 family protein;protein_id=WP_223962981.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 91151 92152 . - . ID=gene-LDO45_RS18970;Name=ctlX;gbkey=Gene;gene=ctlX;gene_biotype=protein_coding;locus_tag=LDO45_RS18970;old_locus_tag=BDI4_380093 NZ_CAJZAS010000192.1 Protein Homology CDS 91151 92152 . - 0 ID=cds-WP_223962983.1;Parent=gene-LDO45_RS18970;Dbxref=GenBank:WP_223962983.1;Name=WP_223962983.1;Ontology_term=GO:0019241;gbkey=CDS;gene=ctlX;go_process=citrulline catabolic process|0019241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495675.1;locus_tag=LDO45_RS18970;product=citrulline utilization hydrolase CtlX;protein_id=WP_223962983.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 92211 93290 . - . ID=gene-LDO45_RS18975;Name=LDO45_RS18975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18975;old_locus_tag=BDI4_380094 NZ_CAJZAS010000192.1 Protein Homology CDS 92211 93290 . - 0 ID=cds-WP_223962985.1;Parent=gene-LDO45_RS18975;Dbxref=GenBank:WP_223962985.1;Name=WP_223962985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015004654.1;locus_tag=LDO45_RS18975;product=ornithine cyclodeaminase;protein_id=WP_223962985.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 93587 94018 . + . ID=gene-LDO45_RS18980;Name=LDO45_RS18980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18980;old_locus_tag=BDI4_380095 NZ_CAJZAS010000192.1 Protein Homology CDS 93587 94018 . + 0 ID=cds-WP_044845386.1;Parent=gene-LDO45_RS18980;Dbxref=GenBank:WP_044845386.1;Name=WP_044845386.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010094990.1;locus_tag=LDO45_RS18980;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_044845386.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 94063 94656 . - . ID=gene-LDO45_RS18985;Name=LDO45_RS18985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18985;old_locus_tag=BDI4_380096 NZ_CAJZAS010000192.1 Protein Homology CDS 94063 94656 . - 0 ID=cds-WP_059690336.1;Parent=gene-LDO45_RS18985;Dbxref=GenBank:WP_059690336.1;Name=WP_059690336.1;Note=This protein belongs to a clade of uncharacterized proteins related to peroxidases such as the alkylhydroperoxidase AhpD.;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356132.1;locus_tag=LDO45_RS18985;product=peroxidase-related enzyme;protein_id=WP_059690336.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 94653 95183 . - . ID=gene-LDO45_RS18990;Name=LDO45_RS18990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18990;old_locus_tag=BDI4_380097 NZ_CAJZAS010000192.1 Protein Homology CDS 94653 95183 . - 0 ID=cds-WP_223962986.1;Parent=gene-LDO45_RS18990;Dbxref=GenBank:WP_223962986.1;Name=WP_223962986.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479716.1;locus_tag=LDO45_RS18990;product=CMD domain-containing protein;protein_id=WP_223962986.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 95230 96672 . - . ID=gene-LDO45_RS18995;Name=LDO45_RS18995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS18995;old_locus_tag=BDI4_380098 NZ_CAJZAS010000192.1 Protein Homology CDS 95230 96672 . - 0 ID=cds-WP_223962987.1;Parent=gene-LDO45_RS18995;Dbxref=GenBank:WP_223962987.1;Name=WP_223962987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760262.1;locus_tag=LDO45_RS18995;product=NAD(P)-binding domain-containing protein;protein_id=WP_223962987.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 96669 97691 . - . ID=gene-LDO45_RS19000;Name=LDO45_RS19000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19000;old_locus_tag=BDI4_380099 NZ_CAJZAS010000192.1 Protein Homology CDS 96669 97691 . - 0 ID=cds-WP_059449148.1;Parent=gene-LDO45_RS19000;Dbxref=GenBank:WP_059449148.1;Name=WP_059449148.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495671.1;locus_tag=LDO45_RS19000;product=LysR family transcriptional regulator;protein_id=WP_059449148.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 98046 99239 . + . ID=gene-LDO45_RS19005;Name=LDO45_RS19005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19005;old_locus_tag=BDI4_380100 NZ_CAJZAS010000192.1 Protein Homology CDS 98046 99239 . + 0 ID=cds-WP_059532073.1;Parent=gene-LDO45_RS19005;Dbxref=GenBank:WP_059532073.1;Name=WP_059532073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416569.1;locus_tag=LDO45_RS19005;product=ABC transporter substrate-binding protein;protein_id=WP_059532073.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 99280 101091 . + . ID=gene-LDO45_RS19010;Name=LDO45_RS19010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19010;old_locus_tag=BDI4_380101 NZ_CAJZAS010000192.1 Protein Homology CDS 99280 101091 . + 0 ID=cds-WP_223962988.1;Parent=gene-LDO45_RS19010;Dbxref=GenBank:WP_223962988.1;Name=WP_223962988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356127.1;locus_tag=LDO45_RS19010;product=ABC transporter permease;protein_id=WP_223962988.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 101103 101960 . + . ID=gene-LDO45_RS19015;Name=LDO45_RS19015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19015;old_locus_tag=BDI4_380102 NZ_CAJZAS010000192.1 Protein Homology CDS 101103 101960 . + 0 ID=cds-WP_059690409.1;Parent=gene-LDO45_RS19015;Dbxref=GenBank:WP_059690409.1;Name=WP_059690409.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602895.1;locus_tag=LDO45_RS19015;product=ABC transporter ATP-binding protein;protein_id=WP_059690409.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 101957 102715 . + . ID=gene-LDO45_RS19020;Name=LDO45_RS19020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19020;old_locus_tag=BDI4_380103 NZ_CAJZAS010000192.1 Protein Homology CDS 101957 102715 . + 0 ID=cds-WP_059532067.1;Parent=gene-LDO45_RS19020;Dbxref=GenBank:WP_059532067.1;Name=WP_059532067.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602949.1;locus_tag=LDO45_RS19020;product=ABC transporter ATP-binding protein;protein_id=WP_059532067.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 102749 104170 . - . ID=gene-LDO45_RS19025;Name=LDO45_RS19025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19025;old_locus_tag=BDI4_380104 NZ_CAJZAS010000192.1 Protein Homology CDS 102749 104170 . - 0 ID=cds-WP_059532064.1;Parent=gene-LDO45_RS19025;Dbxref=GenBank:WP_059532064.1;Name=WP_059532064.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755222.1;locus_tag=LDO45_RS19025;product=sensor histidine kinase;protein_id=WP_059532064.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 104157 104822 . - . ID=gene-LDO45_RS19030;Name=LDO45_RS19030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19030;old_locus_tag=BDI4_380105 NZ_CAJZAS010000192.1 Protein Homology CDS 104157 104822 . - 0 ID=cds-WP_059532061.1;Parent=gene-LDO45_RS19030;Dbxref=GenBank:WP_059532061.1;Name=WP_059532061.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338672.1;locus_tag=LDO45_RS19030;product=response regulator transcription factor;protein_id=WP_059532061.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 105059 106075 . + . ID=gene-LDO45_RS19035;Name=LDO45_RS19035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19035;old_locus_tag=BDI4_380106 NZ_CAJZAS010000192.1 Protein Homology CDS 105059 106075 . + 0 ID=cds-WP_223962989.1;Parent=gene-LDO45_RS19035;Dbxref=GenBank:WP_223962989.1;Name=WP_223962989.1;Ontology_term=GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397845.1;locus_tag=LDO45_RS19035;product=ABC transporter substrate-binding protein;protein_id=WP_223962989.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 106188 107498 . + . ID=gene-LDO45_RS19040;Name=LDO45_RS19040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19040;old_locus_tag=BDI4_380107 NZ_CAJZAS010000192.1 Protein Homology CDS 106188 107498 . + 0 ID=cds-WP_059532058.1;Parent=gene-LDO45_RS19040;Dbxref=GenBank:WP_059532058.1;Name=WP_059532058.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338670.1;locus_tag=LDO45_RS19040;product=MFS transporter;protein_id=WP_059532058.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 107590 109389 . - . ID=gene-LDO45_RS19045;Name=LDO45_RS19045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19045;old_locus_tag=BDI4_380108 NZ_CAJZAS010000192.1 Protein Homology CDS 107590 109389 . - 0 ID=cds-WP_223962990.1;Parent=gene-LDO45_RS19045;Dbxref=GenBank:WP_223962990.1;Name=WP_223962990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724484.1;locus_tag=LDO45_RS19045;product=sensor histidine kinase;protein_id=WP_223962990.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 109386 110033 . - . ID=gene-LDO45_RS19050;Name=LDO45_RS19050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19050;old_locus_tag=BDI4_380110 NZ_CAJZAS010000192.1 Protein Homology CDS 109386 110033 . - 0 ID=cds-WP_059532052.1;Parent=gene-LDO45_RS19050;Dbxref=GenBank:WP_059532052.1;Name=WP_059532052.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660249.1;locus_tag=LDO45_RS19050;product=response regulator transcription factor;protein_id=WP_059532052.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 110341 110793 . + . ID=gene-LDO45_RS19055;Name=LDO45_RS19055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19055;old_locus_tag=BDI4_380111 NZ_CAJZAS010000192.1 Protein Homology CDS 110341 110793 . + 0 ID=cds-WP_059532049.1;Parent=gene-LDO45_RS19055;Dbxref=GenBank:WP_059532049.1;Name=WP_059532049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755806.1;locus_tag=LDO45_RS19055;product=hypothetical protein;protein_id=WP_059532049.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 110896 112914 . + . ID=gene-LDO45_RS19060;Name=LDO45_RS19060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19060;old_locus_tag=BDI4_380112 NZ_CAJZAS010000192.1 Protein Homology CDS 110896 112914 . + 0 ID=cds-WP_223962991.1;Parent=gene-LDO45_RS19060;Dbxref=GenBank:WP_223962991.1;Name=WP_223962991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881400.1;locus_tag=LDO45_RS19060;product=LssY C-terminal domain-containing protein;protein_id=WP_223962991.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 112930 113259 . - . ID=gene-LDO45_RS19065;Name=LDO45_RS19065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19065;old_locus_tag=BDI4_380113 NZ_CAJZAS010000192.1 Protein Homology CDS 112930 113259 . - 0 ID=cds-WP_059532042.1;Parent=gene-LDO45_RS19065;Dbxref=GenBank:WP_059532042.1;Name=WP_059532042.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479699.1;locus_tag=LDO45_RS19065;product=addiction module antidote protein;protein_id=WP_059532042.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 113256 113588 . - . ID=gene-LDO45_RS19070;Name=LDO45_RS19070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19070;old_locus_tag=BDI4_380114 NZ_CAJZAS010000192.1 Protein Homology CDS 113256 113588 . - 0 ID=cds-WP_059702790.1;Parent=gene-LDO45_RS19070;Dbxref=GenBank:WP_059702790.1;Name=WP_059702790.1;Ontology_term=GO:0008219,GO:0004540;gbkey=CDS;go_function=RNA nuclease activity|0004540||IEA;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010097401.1;locus_tag=LDO45_RS19070;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_059702790.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq pseudogene 113874 113990 . + . ID=gene-LDO45_RS19075;Name=LDO45_RS19075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS19075;partial=true;pseudo=true;start_range=.,113874 NZ_CAJZAS010000192.1 Protein Homology CDS 113874 113990 . + 0 ID=cds-LDO45_RS19075;Parent=gene-LDO45_RS19075;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338661.1;locus_tag=LDO45_RS19075;partial=true;product=AraC family transcriptional regulator;pseudo=true;start_range=.,113874;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 114059 114568 . + . ID=gene-LDO45_RS19080;Name=LDO45_RS19080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19080;old_locus_tag=BDI4_380115 NZ_CAJZAS010000192.1 Protein Homology CDS 114059 114568 . + 0 ID=cds-WP_223962993.1;Parent=gene-LDO45_RS19080;Dbxref=GenBank:WP_223962993.1;Name=WP_223962993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660260.1;locus_tag=LDO45_RS19080;product=GNAT family N-acetyltransferase;protein_id=WP_223962993.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 114579 115532 . - . ID=gene-LDO45_RS19085;Name=LDO45_RS19085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19085;old_locus_tag=BDI4_380116 NZ_CAJZAS010000192.1 Protein Homology CDS 114579 115532 . - 0 ID=cds-WP_059532029.1;Parent=gene-LDO45_RS19085;Dbxref=GenBank:WP_059532029.1;Name=WP_059532029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603841.1;locus_tag=LDO45_RS19085;product=hypothetical protein;protein_id=WP_059532029.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 115591 115713 . - . ID=gene-LDO45_RS34275;Name=LDO45_RS34275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34275 NZ_CAJZAS010000192.1 Protein Homology CDS 115591 115713 . - 0 ID=cds-WP_006752127.1;Parent=gene-LDO45_RS34275;Dbxref=GenBank:WP_006752127.1;Name=WP_006752127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330456.1;locus_tag=LDO45_RS34275;product=hypothetical protein;protein_id=WP_006752127.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 116216 117466 . + . ID=gene-LDO45_RS19090;Name=LDO45_RS19090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19090;old_locus_tag=BDI4_380118 NZ_CAJZAS010000192.1 Protein Homology CDS 116216 117466 . + 0 ID=cds-WP_223962995.1;Parent=gene-LDO45_RS19090;Dbxref=GenBank:WP_223962995.1;Name=WP_223962995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495647.1;locus_tag=LDO45_RS19090;product=YbfB/YjiJ family MFS transporter;protein_id=WP_223962995.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 117569 118615 . - . ID=gene-LDO45_RS19095;Name=LDO45_RS19095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19095;old_locus_tag=BDI4_380119 NZ_CAJZAS010000192.1 Protein Homology CDS 117569 118615 . - 0 ID=cds-WP_223962997.1;Parent=gene-LDO45_RS19095;Dbxref=GenBank:WP_223962997.1;Name=WP_223962997.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548368.1;locus_tag=LDO45_RS19095;product=ABC transporter substrate-binding protein;protein_id=WP_223962997.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 118612 119763 . - . ID=gene-LDO45_RS19100;Name=LDO45_RS19100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19100;old_locus_tag=BDI4_380120 NZ_CAJZAS010000192.1 Protein Homology CDS 118612 119763 . - 0 ID=cds-WP_223962999.1;Parent=gene-LDO45_RS19100;Dbxref=GenBank:WP_223962999.1;Name=WP_223962999.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479669.1;locus_tag=LDO45_RS19100;product=FAD-binding oxidoreductase;protein_id=WP_223962999.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 119756 121195 . - . ID=gene-LDO45_RS19105;Name=LDO45_RS19105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19105;old_locus_tag=BDI4_380121 NZ_CAJZAS010000192.1 Protein Homology CDS 119756 121195 . - 0 ID=cds-WP_223963001.1;Parent=gene-LDO45_RS19105;Dbxref=GenBank:WP_223963001.1;Name=WP_223963001.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413190.1;locus_tag=LDO45_RS19105;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_223963001.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 121192 121536 . - . ID=gene-LDO45_RS19110;Name=LDO45_RS19110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19110;old_locus_tag=BDI4_380122 NZ_CAJZAS010000192.1 Protein Homology CDS 121192 121536 . - 0 ID=cds-WP_223963003.1;Parent=gene-LDO45_RS19110;Dbxref=GenBank:WP_223963003.1;Name=WP_223963003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495622.1;locus_tag=LDO45_RS19110;product=(2Fe-2S)-binding protein;protein_id=WP_223963003.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 121536 122330 . - . ID=gene-LDO45_RS19115;Name=LDO45_RS19115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19115;old_locus_tag=BDI4_380123 NZ_CAJZAS010000192.1 Protein Homology CDS 121536 122330 . - 0 ID=cds-WP_059690322.1;Parent=gene-LDO45_RS19115;Dbxref=GenBank:WP_059690322.1;Name=WP_059690322.1;Ontology_term=GO:0055085,GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0005886,GO:0055052;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020068159.1;locus_tag=LDO45_RS19115;product=ABC transporter permease;protein_id=WP_059690322.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 122327 123316 . - . ID=gene-LDO45_RS19120;Name=LDO45_RS19120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19120;old_locus_tag=BDI4_380125 NZ_CAJZAS010000192.1 Protein Homology CDS 122327 123316 . - 0 ID=cds-WP_223963005.1;Parent=gene-LDO45_RS19120;Dbxref=GenBank:WP_223963005.1;Name=WP_223963005.1;Ontology_term=GO:0055085,GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0005886,GO:0055052;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365423.1;locus_tag=LDO45_RS19120;product=ABC transporter permease;protein_id=WP_223963005.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 123317 124399 . - . ID=gene-LDO45_RS19125;Name=LDO45_RS19125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19125;old_locus_tag=BDI4_380126 NZ_CAJZAS010000192.1 Protein Homology CDS 123317 124399 . - 0 ID=cds-WP_223963007.1;Parent=gene-LDO45_RS19125;Dbxref=GenBank:WP_223963007.1;Name=WP_223963007.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759615.1;locus_tag=LDO45_RS19125;product=ABC transporter ATP-binding protein;protein_id=WP_223963007.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 124694 125593 . + . ID=gene-LDO45_RS19130;Name=LDO45_RS19130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19130;old_locus_tag=BDI4_380124 NZ_CAJZAS010000192.1 Protein Homology CDS 124694 125593 . + 0 ID=cds-WP_059532003.1;Parent=gene-LDO45_RS19130;Dbxref=GenBank:WP_059532003.1;Name=WP_059532003.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495618.1;locus_tag=LDO45_RS19130;product=IclR family transcriptional regulator;protein_id=WP_059532003.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 125914 127029 . + . ID=gene-LDO45_RS19135;Name=LDO45_RS19135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19135;old_locus_tag=BDI4_380128 NZ_CAJZAS010000192.1 Protein Homology CDS 125914 127029 . + 0 ID=cds-WP_373559445.1;Parent=gene-LDO45_RS19135;Dbxref=GenBank:WP_373559445.1;Name=WP_373559445.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900270.1;locus_tag=LDO45_RS19135;product=porin;protein_id=WP_373559445.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 127069 127281 . + . ID=gene-LDO45_RS19140;Name=LDO45_RS19140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19140;old_locus_tag=BDI4_380129 NZ_CAJZAS010000192.1 Protein Homology CDS 127069 127281 . + 0 ID=cds-WP_059702769.1;Parent=gene-LDO45_RS19140;Dbxref=GenBank:WP_059702769.1;Name=WP_059702769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900269.1;locus_tag=LDO45_RS19140;product=DUF3311 domain-containing protein;protein_id=WP_059702769.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 127278 128756 . + . ID=gene-LDO45_RS19145;Name=LDO45_RS19145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19145;old_locus_tag=BDI4_380130 NZ_CAJZAS010000192.1 Protein Homology CDS 127278 128756 . + 0 ID=cds-WP_223963009.1;Parent=gene-LDO45_RS19145;Dbxref=GenBank:WP_223963009.1;Name=WP_223963009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356069.1;locus_tag=LDO45_RS19145;product=sodium:solute symporter;protein_id=WP_223963009.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 128860 130332 . + . ID=gene-LDO45_RS19150;Name=LDO45_RS19150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19150;old_locus_tag=BDI4_380132 NZ_CAJZAS010000192.1 Protein Homology CDS 128860 130332 . + 0 ID=cds-WP_223963011.1;Parent=gene-LDO45_RS19150;Dbxref=GenBank:WP_223963011.1;Name=WP_223963011.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900267.1;locus_tag=LDO45_RS19150;product=amidohydrolase family protein;protein_id=WP_223963011.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 130464 130847 . + . ID=gene-LDO45_RS19155;Name=LDO45_RS19155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19155;old_locus_tag=BDI4_380133 NZ_CAJZAS010000192.1 Protein Homology CDS 130464 130847 . + 0 ID=cds-WP_059531991.1;Parent=gene-LDO45_RS19155;Dbxref=GenBank:WP_059531991.1;Name=WP_059531991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548356.1;locus_tag=LDO45_RS19155;product=hypothetical protein;protein_id=WP_059531991.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 130956 132518 . - . ID=gene-LDO45_RS19160;Name=LDO45_RS19160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19160;old_locus_tag=BDI4_380134 NZ_CAJZAS010000192.1 Protein Homology CDS 130956 132518 . - 0 ID=cds-WP_223963013.1;Parent=gene-LDO45_RS19160;Dbxref=GenBank:WP_223963013.1;Name=WP_223963013.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759613.1;locus_tag=LDO45_RS19160;product=methyl-accepting chemotaxis protein;protein_id=WP_223963013.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 132812 133255 . - . ID=gene-LDO45_RS19165;Name=LDO45_RS19165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19165;old_locus_tag=BDI4_380135 NZ_CAJZAS010000192.1 Protein Homology CDS 132812 133255 . - 0 ID=cds-WP_223963024.1;Parent=gene-LDO45_RS19165;Dbxref=GenBank:WP_223963024.1;Name=WP_223963024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900262.1;locus_tag=LDO45_RS19165;product=VOC family protein;protein_id=WP_223963024.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq pseudogene 133332 134802 . - . ID=gene-LDO45_RS19170;Name=LDO45_RS19170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS19170;pseudo=true NZ_CAJZAS010000192.1 Protein Homology CDS 133332 134802 . - 0 ID=cds-LDO45_RS19170;Parent=gene-LDO45_RS19170;Note=frameshifted;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012218410.1;locus_tag=LDO45_RS19170;product=alkaline phosphatase family protein;pseudo=true;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 135220 135990 . - . ID=gene-LDO45_RS19175;Name=LDO45_RS19175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19175;old_locus_tag=BDI4_380138 NZ_CAJZAS010000192.1 Protein Homology CDS 135220 135990 . - 0 ID=cds-WP_059601335.1;Parent=gene-LDO45_RS19175;Dbxref=GenBank:WP_059601335.1;Name=WP_059601335.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011356062.1;locus_tag=LDO45_RS19175;product=ABC transporter substrate-binding protein;protein_id=WP_059601335.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 136140 137369 . - . ID=gene-LDO45_RS19180;Name=LDO45_RS19180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19180;old_locus_tag=BDI4_380139 NZ_CAJZAS010000192.1 Protein Homology CDS 136140 137369 . - 0 ID=cds-WP_223963026.1;Parent=gene-LDO45_RS19180;Dbxref=GenBank:WP_223963026.1;Name=WP_223963026.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365428.1;locus_tag=LDO45_RS19180;product=cyanate transporter;protein_id=WP_223963026.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq gene 137510 138379 . - . ID=gene-LDO45_RS19185;Name=LDO45_RS19185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19185;old_locus_tag=BDI4_380140 NZ_CAJZAS010000192.1 Protein Homology CDS 137510 138379 . - 0 ID=cds-WP_223963028.1;Parent=gene-LDO45_RS19185;Dbxref=GenBank:WP_223963028.1;Name=WP_223963028.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660303.1;locus_tag=LDO45_RS19185;product=helix-turn-helix transcriptional regulator;protein_id=WP_223963028.1;transl_table=11 NZ_CAJZAS010000192.1 RefSeq pseudogene 138474 138922 . + . ID=gene-LDO45_RS19190;Name=LDO45_RS19190;end_range=138922,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS19190;partial=true;pseudo=true NZ_CAJZAS010000192.1 Protein Homology CDS 138474 138922 . + 0 ID=cds-LDO45_RS19190;Parent=gene-LDO45_RS19190;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing C-terminus;Ontology_term=GO:0003824;end_range=138922,.;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548354.1;locus_tag=LDO45_RS19190;partial=true;product=NAD-dependent epimerase/dehydratase family protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000193.1 1 27185 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000193.1 RefSeq region 1 27185 . + . ID=NZ_CAJZAS010000193.1:1..27185;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_39 NZ_CAJZAS010000193.1 RefSeq pseudogene 1 124 . + . ID=gene-LDO45_RS19195;Name=LDO45_RS19195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS19195;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000193.1 Protein Homology CDS 1 124 . + 1 ID=cds-LDO45_RS19195;Parent=gene-LDO45_RS19195;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334928.1;locus_tag=LDO45_RS19195;partial=true;product=nitronate monooxygenase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 545 1687 . + . ID=gene-LDO45_RS19200;Name=LDO45_RS19200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19200;old_locus_tag=BDI4_390002 NZ_CAJZAS010000193.1 Protein Homology CDS 545 1687 . + 0 ID=cds-WP_059533457.1;Parent=gene-LDO45_RS19200;Dbxref=GenBank:WP_059533457.1;Name=WP_059533457.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195762.1;locus_tag=LDO45_RS19200;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_059533457.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq pseudogene 1789 2989 . - . ID=gene-LDO45_RS19205;Name=LDO45_RS19205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS19205;old_locus_tag=BDI4_390003;pseudo=true NZ_CAJZAS010000193.1 Protein Homology CDS 1789 2989 . - 0 ID=cds-LDO45_RS19205;Parent=gene-LDO45_RS19205;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753864.1;locus_tag=LDO45_RS19205;product=MFS transporter;pseudo=true;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 3264 3923 . + . ID=gene-LDO45_RS19210;Name=LDO45_RS19210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19210;old_locus_tag=BDI4_390004 NZ_CAJZAS010000193.1 Protein Homology CDS 3264 3923 . + 0 ID=cds-WP_059691544.1;Parent=gene-LDO45_RS19210;Dbxref=GenBank:WP_059691544.1;Name=WP_059691544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327717.1;locus_tag=LDO45_RS19210;product=HugZ family protein;protein_id=WP_059691544.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 4279 4572 . + . ID=gene-LDO45_RS19215;Name=LDO45_RS19215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19215;old_locus_tag=BDI4_390005 NZ_CAJZAS010000193.1 Protein Homology CDS 4279 4572 . + 0 ID=cds-WP_006491875.1;Parent=gene-LDO45_RS19215;Dbxref=GenBank:WP_006491875.1;Name=WP_006491875.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696300.1;locus_tag=LDO45_RS19215;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_006491875.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 4807 5964 . + . ID=gene-LDO45_RS19220;Name=LDO45_RS19220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19220;old_locus_tag=BDI4_390006 NZ_CAJZAS010000193.1 Protein Homology CDS 4807 5964 . + 0 ID=cds-WP_059691545.1;Parent=gene-LDO45_RS19220;Dbxref=GenBank:WP_059691545.1;Name=WP_059691545.1;Ontology_term=GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212529.1;locus_tag=LDO45_RS19220;product=cation diffusion facilitator family transporter;protein_id=WP_059691545.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 5992 6462 . - . ID=gene-LDO45_RS19225;Name=LDO45_RS19225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19225;old_locus_tag=BDI4_390007 NZ_CAJZAS010000193.1 Protein Homology CDS 5992 6462 . - 0 ID=cds-WP_006477376.1;Parent=gene-LDO45_RS19225;Dbxref=GenBank:WP_006477376.1;Name=WP_006477376.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016346759.1;locus_tag=LDO45_RS19225;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_006477376.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 6542 7201 . - . ID=gene-LDO45_RS19230;Name=LDO45_RS19230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19230;old_locus_tag=BDI4_390008 NZ_CAJZAS010000193.1 Protein Homology CDS 6542 7201 . - 0 ID=cds-WP_059452651.1;Parent=gene-LDO45_RS19230;Dbxref=GenBank:WP_059452651.1;Name=WP_059452651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895588.1;locus_tag=LDO45_RS19230;product=hypothetical protein;protein_id=WP_059452651.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 7198 7842 . - . ID=gene-LDO45_RS19235;Name=LDO45_RS19235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19235;old_locus_tag=BDI4_390009 NZ_CAJZAS010000193.1 Protein Homology CDS 7198 7842 . - 0 ID=cds-WP_059533448.1;Parent=gene-LDO45_RS19235;Dbxref=GenBank:WP_059533448.1;Name=WP_059533448.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010107034.1;locus_tag=LDO45_RS19235;product=MBL fold metallo-hydrolase;protein_id=WP_059533448.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 8503 9114 . + . ID=gene-LDO45_RS19240;Name=LDO45_RS19240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19240;old_locus_tag=BDI4_390010 NZ_CAJZAS010000193.1 Protein Homology CDS 8503 9114 . + 0 ID=cds-WP_059533446.1;Parent=gene-LDO45_RS19240;Dbxref=GenBank:WP_059533446.1;Name=WP_059533446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401362.1;locus_tag=LDO45_RS19240;product=septal ring lytic transglycosylase RlpA family protein;protein_id=WP_059533446.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 9210 10088 . - . ID=gene-LDO45_RS19245;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=LDO45_RS19245;old_locus_tag=BDI4_390011 NZ_CAJZAS010000193.1 Protein Homology CDS 9210 10088 . - 0 ID=cds-WP_223963030.1;Parent=gene-LDO45_RS19245;Dbxref=GenBank:WP_223963030.1;Name=WP_223963030.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882937.1;locus_tag=LDO45_RS19245;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_223963030.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 10135 10563 . + . ID=gene-LDO45_RS19250;Name=LDO45_RS19250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19250;old_locus_tag=BDI4_390012 NZ_CAJZAS010000193.1 Protein Homology CDS 10135 10563 . + 0 ID=cds-WP_223963045.1;Parent=gene-LDO45_RS19250;Dbxref=GenBank:WP_223963045.1;Name=WP_223963045.1;Ontology_term=GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546685.1;locus_tag=LDO45_RS19250;product=YraN family protein;protein_id=WP_223963045.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 10692 11276 . + . ID=gene-LDO45_RS19255;Name=LDO45_RS19255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19255;old_locus_tag=BDI4_390013 NZ_CAJZAS010000193.1 Protein Homology CDS 10692 11276 . + 0 ID=cds-WP_059691549.1;Parent=gene-LDO45_RS19255;Dbxref=GenBank:WP_059691549.1;Name=WP_059691549.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493587.1;locus_tag=LDO45_RS19255;product=SIS domain-containing protein;protein_id=WP_059691549.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 11294 12091 . + . ID=gene-LDO45_RS19260;Name=LDO45_RS19260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19260;old_locus_tag=BDI4_390015 NZ_CAJZAS010000193.1 Protein Homology CDS 11294 12091 . + 0 ID=cds-WP_059533438.1;Parent=gene-LDO45_RS19260;Dbxref=GenBank:WP_059533438.1;Name=WP_059533438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212533.1;locus_tag=LDO45_RS19260;product=BON domain-containing protein;protein_id=WP_059533438.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 12088 12447 . + . ID=gene-LDO45_RS19265;Name=LDO45_RS19265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19265;old_locus_tag=BDI4_390014 NZ_CAJZAS010000193.1 Protein Homology CDS 12088 12447 . + 0 ID=cds-WP_059699681.1;Parent=gene-LDO45_RS19265;Dbxref=GenBank:WP_059699681.1;Name=WP_059699681.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895595.1;locus_tag=LDO45_RS19265;product=c-type cytochrome;protein_id=WP_059699681.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 12514 12589 . + . ID=gene-LDO45_RS19270;Name=LDO45_RS19270;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS19270;old_locus_tag=BDI4_TRNA13 NZ_CAJZAS010000193.1 tRNAscan-SE tRNA 12514 12589 . + . ID=rna-LDO45_RS19270;Parent=gene-LDO45_RS19270;anticodon=(pos:12547..12549);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS19270;product=tRNA-Ala NZ_CAJZAS010000193.1 tRNAscan-SE exon 12514 12589 . + . ID=exon-LDO45_RS19270-1;Parent=rna-LDO45_RS19270;anticodon=(pos:12547..12549);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS19270;product=tRNA-Ala NZ_CAJZAS010000193.1 RefSeq gene 12658 14055 . - . ID=gene-LDO45_RS19275;Name=LDO45_RS19275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19275;old_locus_tag=BDI4_390017 NZ_CAJZAS010000193.1 Protein Homology CDS 12658 14055 . - 0 ID=cds-WP_223963031.1;Parent=gene-LDO45_RS19275;Dbxref=GenBank:WP_223963031.1;Name=WP_223963031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362855.1;locus_tag=LDO45_RS19275;product=enolase C-terminal domain-like protein;protein_id=WP_223963031.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 14118 15458 . - . ID=gene-LDO45_RS19280;Name=LDO45_RS19280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19280;old_locus_tag=BDI4_390018 NZ_CAJZAS010000193.1 Protein Homology CDS 14118 15458 . - 0 ID=cds-WP_223963032.1;Parent=gene-LDO45_RS19280;Dbxref=GenBank:WP_223963032.1;Name=WP_223963032.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753789.1;locus_tag=LDO45_RS19280;product=MFS transporter;protein_id=WP_223963032.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 15696 16670 . - . ID=gene-LDO45_RS19285;Name=LDO45_RS19285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19285;old_locus_tag=BDI4_390019 NZ_CAJZAS010000193.1 Protein Homology CDS 15696 16670 . - 0 ID=cds-WP_223963033.1;Parent=gene-LDO45_RS19285;Dbxref=GenBank:WP_223963033.1;Name=WP_223963033.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497440.1;locus_tag=LDO45_RS19285;product=LysR family transcriptional regulator;protein_id=WP_223963033.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 16709 17440 . + . ID=gene-LDO45_RS19290;Name=LDO45_RS19290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19290;old_locus_tag=BDI4_390020 NZ_CAJZAS010000193.1 Protein Homology CDS 16709 17440 . + 0 ID=cds-WP_059691556.1;Parent=gene-LDO45_RS19290;Dbxref=GenBank:WP_059691556.1;Name=WP_059691556.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486215.1;locus_tag=LDO45_RS19290;product=glutathione S-transferase family protein;protein_id=WP_059691556.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 17566 18192 . + . ID=gene-LDO45_RS19295;Name=LDO45_RS19295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19295;old_locus_tag=BDI4_390021 NZ_CAJZAS010000193.1 Protein Homology CDS 17566 18192 . + 0 ID=cds-WP_223963035.1;Parent=gene-LDO45_RS19295;Dbxref=GenBank:WP_223963035.1;Name=WP_223963035.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497438.1;locus_tag=LDO45_RS19295;product=DUF2239 family protein;protein_id=WP_223963035.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 18209 19546 . + . ID=gene-LDO45_RS19300;Name=LDO45_RS19300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19300;old_locus_tag=BDI4_390022 NZ_CAJZAS010000193.1 Protein Homology CDS 18209 19546 . + 0 ID=cds-WP_223963037.1;Parent=gene-LDO45_RS19300;Dbxref=GenBank:WP_223963037.1;Name=WP_223963037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327732.1;locus_tag=LDO45_RS19300;product=carotenoid oxygenase family protein;protein_id=WP_223963037.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 19560 20726 . - . ID=gene-LDO45_RS19305;Name=LDO45_RS19305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19305;old_locus_tag=BDI4_390023 NZ_CAJZAS010000193.1 Protein Homology CDS 19560 20726 . - 0 ID=cds-WP_059533414.1;Parent=gene-LDO45_RS19305;Dbxref=GenBank:WP_059533414.1;Name=WP_059533414.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497436.1;locus_tag=LDO45_RS19305;product=ABC transporter permease;protein_id=WP_059533414.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 20731 21885 . - . ID=gene-LDO45_RS19310;Name=LDO45_RS19310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19310;old_locus_tag=BDI4_390024 NZ_CAJZAS010000193.1 Protein Homology CDS 20731 21885 . - 0 ID=cds-WP_059533413.1;Parent=gene-LDO45_RS19310;Dbxref=GenBank:WP_059533413.1;Name=WP_059533413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546674.1;locus_tag=LDO45_RS19310;product=ABC transporter permease;protein_id=WP_059533413.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 21904 22602 . - . ID=gene-LDO45_RS19315;Name=LDO45_RS19315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19315;old_locus_tag=BDI4_390025 NZ_CAJZAS010000193.1 Protein Homology CDS 21904 22602 . - 0 ID=cds-WP_059533517.1;Parent=gene-LDO45_RS19315;Dbxref=GenBank:WP_059533517.1;Name=WP_059533517.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413520.1;locus_tag=LDO45_RS19315;product=ABC transporter ATP-binding protein;protein_id=WP_059533517.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 22613 23818 . - . ID=gene-LDO45_RS19320;Name=LDO45_RS19320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19320;old_locus_tag=BDI4_390026 NZ_CAJZAS010000193.1 Protein Homology CDS 22613 23818 . - 0 ID=cds-WP_059691558.1;Parent=gene-LDO45_RS19320;Dbxref=GenBank:WP_059691558.1;Name=WP_059691558.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484502.1;locus_tag=LDO45_RS19320;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_059691558.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 24186 24419 . + . ID=gene-LDO45_RS19325;Name=LDO45_RS19325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19325;old_locus_tag=BDI4_390028 NZ_CAJZAS010000193.1 Protein Homology CDS 24186 24419 . + 0 ID=cds-WP_040126461.1;Parent=gene-LDO45_RS19325;Dbxref=GenBank:WP_040126461.1;Name=WP_040126461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327737.1;locus_tag=LDO45_RS19325;product=hypothetical protein;protein_id=WP_040126461.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 24498 25265 . - . ID=gene-LDO45_RS19330;Name=LDO45_RS19330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19330;old_locus_tag=BDI4_390029 NZ_CAJZAS010000193.1 Protein Homology CDS 24498 25265 . - 0 ID=cds-WP_223963039.1;Parent=gene-LDO45_RS19330;Dbxref=GenBank:WP_223963039.1;Name=WP_223963039.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497433.1;locus_tag=LDO45_RS19330;product=Mut7-C ubiquitin/RNAse domain-containing protein;protein_id=WP_223963039.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 25376 26245 . + . ID=gene-LDO45_RS19335;Name=LDO45_RS19335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19335;old_locus_tag=BDI4_390030 NZ_CAJZAS010000193.1 Protein Homology CDS 25376 26245 . + 0 ID=cds-WP_059533405.1;Parent=gene-LDO45_RS19335;Dbxref=GenBank:WP_059533405.1;Name=WP_059533405.1;Ontology_term=GO:0050661,GO:0051287;gbkey=CDS;go_function=NADP binding|0050661||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023775.1;locus_tag=LDO45_RS19335;product=NAD(P)-dependent oxidoreductase;protein_id=WP_059533405.1;transl_table=11 NZ_CAJZAS010000193.1 RefSeq gene 26317 26958 . + . ID=gene-LDO45_RS19340;Name=LDO45_RS19340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19340;old_locus_tag=BDI4_390031 NZ_CAJZAS010000193.1 Protein Homology CDS 26317 26958 . + 0 ID=cds-WP_223963043.1;Parent=gene-LDO45_RS19340;Dbxref=GenBank:WP_223963043.1;Name=WP_223963043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757898.1;locus_tag=LDO45_RS19340;product=LysE family translocator;protein_id=WP_223963043.1;transl_table=11 ##sequence-region NZ_CAJZAS010000194.1 1 94041 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000194.1 RefSeq region 1 94041 . + . ID=NZ_CAJZAS010000194.1:1..94041;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_4 NZ_CAJZAS010000194.1 RefSeq pseudogene 1 272 . - . ID=gene-LDO45_RS19350;Name=LDO45_RS19350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS19350;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000194.1 Protein Homology CDS 1 272 . - 0 ID=cds-LDO45_RS19350;Parent=gene-LDO45_RS19350;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328453.1;locus_tag=LDO45_RS19350;partial=true;product=Fe(3+)-hydroxamate ABC transporter permease FhuB;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 269 1120 . - . ID=gene-LDO45_RS19355;Name=LDO45_RS19355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19355;old_locus_tag=BDI4_40002 NZ_CAJZAS010000194.1 Protein Homology CDS 269 1120 . - 0 ID=cds-WP_223963047.1;Parent=gene-LDO45_RS19355;Dbxref=GenBank:WP_223963047.1;Name=WP_223963047.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486076.1;locus_tag=LDO45_RS19355;product=ABC transporter ATP-binding protein;protein_id=WP_223963047.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 1110 2129 . - . ID=gene-LDO45_RS19360;Name=LDO45_RS19360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19360;old_locus_tag=BDI4_40003 NZ_CAJZAS010000194.1 Protein Homology CDS 1110 2129 . - 0 ID=cds-WP_223963049.1;Parent=gene-LDO45_RS19360;Dbxref=GenBank:WP_223963049.1;Name=WP_223963049.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656819.1;locus_tag=LDO45_RS19360;product=TauD/TfdA family dioxygenase;protein_id=WP_223963049.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 2175 2417 . - . ID=gene-LDO45_RS19365;Name=LDO45_RS19365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19365;old_locus_tag=BDI4_40004 NZ_CAJZAS010000194.1 Protein Homology CDS 2175 2417 . - 0 ID=cds-WP_059510746.1;Parent=gene-LDO45_RS19365;Dbxref=GenBank:WP_059510746.1;Name=WP_059510746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363848.1;locus_tag=LDO45_RS19365;product=MbtH family NRPS accessory protein;protein_id=WP_059510746.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 2512 3180 . - . ID=gene-LDO45_RS19370;Name=LDO45_RS19370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19370;old_locus_tag=BDI4_40005 NZ_CAJZAS010000194.1 Protein Homology CDS 2512 3180 . - 0 ID=cds-WP_223963051.1;Parent=gene-LDO45_RS19370;Dbxref=GenBank:WP_223963051.1;Name=WP_223963051.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476053.1;locus_tag=LDO45_RS19370;product=RNA polymerase factor sigma-70;protein_id=WP_223963051.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 3510 4541 . - . ID=gene-LDO45_RS19375;Name=LDO45_RS19375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19375;old_locus_tag=BDI4_40007 NZ_CAJZAS010000194.1 Protein Homology CDS 3510 4541 . - 0 ID=cds-WP_059691741.1;Parent=gene-LDO45_RS19375;Dbxref=GenBank:WP_059691741.1;Name=WP_059691741.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010103818.1;locus_tag=LDO45_RS19375;product=fimbrial protein;protein_id=WP_059691741.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 4538 5284 . - . ID=gene-LDO45_RS19380;Name=LDO45_RS19380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19380;old_locus_tag=BDI4_40008 NZ_CAJZAS010000194.1 Protein Homology CDS 4538 5284 . - 0 ID=cds-WP_059524557.1;Parent=gene-LDO45_RS19380;Dbxref=GenBank:WP_059524557.1;Name=WP_059524557.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414162.1;locus_tag=LDO45_RS19380;product=molecular chaperone;protein_id=WP_059524557.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 5301 7754 . - . ID=gene-LDO45_RS19385;Name=LDO45_RS19385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19385;old_locus_tag=BDI4_40009 NZ_CAJZAS010000194.1 Protein Homology CDS 5301 7754 . - 0 ID=cds-WP_223963144.1;Parent=gene-LDO45_RS19385;Dbxref=GenBank:WP_223963144.1;Name=WP_223963144.1;Ontology_term=GO:0009297,GO:0015473;gbkey=CDS;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753782.1;locus_tag=LDO45_RS19385;product=fimbria/pilus outer membrane usher protein;protein_id=WP_223963144.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 7877 8389 . - . ID=gene-LDO45_RS19390;Name=LDO45_RS19390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19390;old_locus_tag=BDI4_40010 NZ_CAJZAS010000194.1 Protein Homology CDS 7877 8389 . - 0 ID=cds-WP_059524437.1;Parent=gene-LDO45_RS19390;Dbxref=GenBank:WP_059524437.1;Name=WP_059524437.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193385.1;locus_tag=LDO45_RS19390;product=fimbrial protein;protein_id=WP_059524437.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 9224 10690 . - . ID=gene-LDO45_RS19395;Name=LDO45_RS19395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19395;old_locus_tag=BDI4_40013 NZ_CAJZAS010000194.1 Protein Homology CDS 9224 10690 . - 0 ID=cds-WP_223963053.1;Parent=gene-LDO45_RS19395;Dbxref=GenBank:WP_223963053.1;Name=WP_223963053.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332347.1;locus_tag=LDO45_RS19395;product=efflux transporter outer membrane subunit;protein_id=WP_223963053.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 10687 13824 . - . ID=gene-LDO45_RS19400;Name=LDO45_RS19400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19400;old_locus_tag=BDI4_40014 NZ_CAJZAS010000194.1 Protein Homology CDS 10687 13824 . - 0 ID=cds-WP_223963056.1;Parent=gene-LDO45_RS19400;Dbxref=GenBank:WP_223963056.1;Name=WP_223963056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213376.1;locus_tag=LDO45_RS19400;product=multidrug efflux RND transporter permease subunit;protein_id=WP_223963056.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 13844 15031 . - . ID=gene-LDO45_RS19405;Name=LDO45_RS19405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19405;old_locus_tag=BDI4_40015 NZ_CAJZAS010000194.1 Protein Homology CDS 13844 15031 . - 0 ID=cds-WP_223963058.1;Parent=gene-LDO45_RS19405;Dbxref=GenBank:WP_223963058.1;Name=WP_223963058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897085.1;locus_tag=LDO45_RS19405;product=MexX/AxyX family multidrug efflux RND transporter periplasmic adaptor subunit;protein_id=WP_223963058.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 15182 15847 . + . ID=gene-LDO45_RS19410;Name=LDO45_RS19410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19410;old_locus_tag=BDI4_40016 NZ_CAJZAS010000194.1 Protein Homology CDS 15182 15847 . + 0 ID=cds-WP_059524445.1;Parent=gene-LDO45_RS19410;Dbxref=GenBank:WP_059524445.1;Name=WP_059524445.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213378.1;locus_tag=LDO45_RS19410;product=TetR family transcriptional regulator;protein_id=WP_059524445.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 16159 17439 . + . ID=gene-LDO45_RS19415;Name=LDO45_RS19415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19415;old_locus_tag=BDI4_40018 NZ_CAJZAS010000194.1 Protein Homology CDS 16159 17439 . + 0 ID=cds-WP_059524447.1;Parent=gene-LDO45_RS19415;Dbxref=GenBank:WP_059524447.1;Name=WP_059524447.1;Ontology_term=GO:0004222;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656807.1;locus_tag=LDO45_RS19415;product=M23 family metallopeptidase;protein_id=WP_059524447.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 17503 18225 . - . ID=gene-LDO45_RS19420;Name=LDO45_RS19420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19420;old_locus_tag=BDI4_40019 NZ_CAJZAS010000194.1 Protein Homology CDS 17503 18225 . - 0 ID=cds-WP_223963060.1;Parent=gene-LDO45_RS19420;Dbxref=GenBank:WP_223963060.1;Name=WP_223963060.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545358.1;locus_tag=LDO45_RS19420;product=amino acid ABC transporter permease;protein_id=WP_223963060.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 18228 18950 . - . ID=gene-LDO45_RS19425;Name=LDO45_RS19425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19425;old_locus_tag=BDI4_40020 NZ_CAJZAS010000194.1 Protein Homology CDS 18228 18950 . - 0 ID=cds-WP_223963062.1;Parent=gene-LDO45_RS19425;Dbxref=GenBank:WP_223963062.1;Name=WP_223963062.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351917.1;locus_tag=LDO45_RS19425;product=amino acid ABC transporter permease;protein_id=WP_223963062.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 19057 19872 . - . ID=gene-LDO45_RS19430;Name=LDO45_RS19430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19430;old_locus_tag=BDI4_40021 NZ_CAJZAS010000194.1 Protein Homology CDS 19057 19872 . - 0 ID=cds-WP_223963064.1;Parent=gene-LDO45_RS19430;Dbxref=GenBank:WP_223963064.1;Name=WP_223963064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483955.1;locus_tag=LDO45_RS19430;product=ABC transporter substrate-binding protein;protein_id=WP_223963064.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 20336 21640 . - . ID=gene-LDO45_RS19435;Name=LDO45_RS19435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19435;old_locus_tag=BDI4_40023 NZ_CAJZAS010000194.1 Protein Homology CDS 20336 21640 . - 0 ID=cds-WP_059524454.1;Parent=gene-LDO45_RS19435;Dbxref=GenBank:WP_059524454.1;Name=WP_059524454.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754308.1;locus_tag=LDO45_RS19435;product=MFS family transporter;protein_id=WP_059524454.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 21878 23557 . - . ID=gene-LDO45_RS19440;Name=LDO45_RS19440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19440;old_locus_tag=BDI4_40024 NZ_CAJZAS010000194.1 Protein Homology CDS 21878 23557 . - 0 ID=cds-WP_223963066.1;Parent=gene-LDO45_RS19440;Dbxref=GenBank:WP_223963066.1;Name=WP_223963066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694280.1;locus_tag=LDO45_RS19440;product=SpoVR family protein;protein_id=WP_223963066.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 23554 24822 . - . ID=gene-LDO45_RS19445;Name=LDO45_RS19445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19445;old_locus_tag=BDI4_40025 NZ_CAJZAS010000194.1 Protein Homology CDS 23554 24822 . - 0 ID=cds-WP_059524458.1;Parent=gene-LDO45_RS19445;Dbxref=GenBank:WP_059524458.1;Name=WP_059524458.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332328.1;locus_tag=LDO45_RS19445;product=YeaH/YhbH family protein;protein_id=WP_059524458.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 24948 26870 . - . ID=gene-LDO45_RS19450;Name=LDO45_RS19450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19450;old_locus_tag=BDI4_40026 NZ_CAJZAS010000194.1 Protein Homology CDS 24948 26870 . - 0 ID=cds-WP_059524460.1;Parent=gene-LDO45_RS19450;Dbxref=GenBank:WP_059524460.1;Name=WP_059524460.1;Ontology_term=GO:0004672;gbkey=CDS;go_function=protein kinase activity|0004672||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020165153.1;locus_tag=LDO45_RS19450;product=PrkA family serine protein kinase;protein_id=WP_059524460.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 27380 29146 . - . ID=gene-LDO45_RS19455;Name=LDO45_RS19455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19455;old_locus_tag=BDI4_40028 NZ_CAJZAS010000194.1 Protein Homology CDS 27380 29146 . - 0 ID=cds-WP_223963068.1;Parent=gene-LDO45_RS19455;Dbxref=GenBank:WP_223963068.1;Name=WP_223963068.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328438.1;locus_tag=LDO45_RS19455;product=methyl-accepting chemotaxis protein;protein_id=WP_223963068.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 29424 30353 . - . ID=gene-LDO45_RS19460;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=LDO45_RS19460;old_locus_tag=BDI4_40029 NZ_CAJZAS010000194.1 Protein Homology CDS 29424 30353 . - 0 ID=cds-WP_059818170.1;Parent=gene-LDO45_RS19460;Dbxref=GenBank:WP_059818170.1;Name=WP_059818170.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213383.1;locus_tag=LDO45_RS19460;product=ribokinase;protein_id=WP_059818170.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 30350 31381 . - . ID=gene-LDO45_RS19465;Name=LDO45_RS19465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19465;old_locus_tag=BDI4_40030 NZ_CAJZAS010000194.1 Protein Homology CDS 30350 31381 . - 0 ID=cds-WP_059524464.1;Parent=gene-LDO45_RS19465;Dbxref=GenBank:WP_059524464.1;Name=WP_059524464.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009912507.1;locus_tag=LDO45_RS19465;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_059524464.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 31420 32439 . - . ID=gene-LDO45_RS19470;Name=LDO45_RS19470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19470;old_locus_tag=BDI4_40031 NZ_CAJZAS010000194.1 Protein Homology CDS 31420 32439 . - 0 ID=cds-WP_059524466.1;Parent=gene-LDO45_RS19470;Dbxref=GenBank:WP_059524466.1;Name=WP_059524466.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759467.1;locus_tag=LDO45_RS19470;product=ABC transporter permease;protein_id=WP_059524466.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 32436 34049 . - . ID=gene-LDO45_RS19475;Name=LDO45_RS19475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19475;old_locus_tag=BDI4_40032 NZ_CAJZAS010000194.1 Protein Homology CDS 32436 34049 . - 0 ID=cds-WP_223963071.1;Parent=gene-LDO45_RS19475;Dbxref=GenBank:WP_223963071.1;Name=WP_223963071.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495212.1;locus_tag=LDO45_RS19475;product=sugar ABC transporter ATP-binding protein;protein_id=WP_223963071.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 34189 35139 . - . ID=gene-LDO45_RS19480;Name=LDO45_RS19480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19480;old_locus_tag=BDI4_40033 NZ_CAJZAS010000194.1 Protein Homology CDS 34189 35139 . - 0 ID=cds-WP_059524470.1;Parent=gene-LDO45_RS19480;Dbxref=GenBank:WP_059524470.1;Name=WP_059524470.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332399.1;locus_tag=LDO45_RS19480;product=sugar ABC transporter substrate-binding protein;protein_id=WP_059524470.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 35515 36441 . - . ID=gene-LDO45_RS19485;Name=LDO45_RS19485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19485;old_locus_tag=BDI4_40034 NZ_CAJZAS010000194.1 Protein Homology CDS 35515 36441 . - 0 ID=cds-WP_059524472.1;Parent=gene-LDO45_RS19485;Dbxref=GenBank:WP_059524472.1;Name=WP_059524472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012401017.1;locus_tag=LDO45_RS19485;product=CysB family HTH-type transcriptional regulator;protein_id=WP_059524472.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 36522 37580 . - . ID=gene-LDO45_RS19490;Name=LDO45_RS19490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19490;old_locus_tag=BDI4_40035 NZ_CAJZAS010000194.1 Protein Homology CDS 36522 37580 . - 0 ID=cds-WP_059524474.1;Parent=gene-LDO45_RS19490;Dbxref=GenBank:WP_059524474.1;Name=WP_059524474.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897109.1;locus_tag=LDO45_RS19490;product=sulfate/molybdate ABC transporter ATP-binding protein;protein_id=WP_059524474.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 37594 38541 . - . ID=gene-LDO45_RS19495;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=LDO45_RS19495;old_locus_tag=BDI4_40036 NZ_CAJZAS010000194.1 Protein Homology CDS 37594 38541 . - 0 ID=cds-WP_059691754.1;Parent=gene-LDO45_RS19495;Dbxref=GenBank:WP_059691754.1;Name=WP_059691754.1;Ontology_term=GO:0008272,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysW;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213386.1;locus_tag=LDO45_RS19495;product=sulfate ABC transporter permease subunit CysW;protein_id=WP_059691754.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 38538 39434 . - . ID=gene-LDO45_RS19500;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=LDO45_RS19500;old_locus_tag=BDI4_40037 NZ_CAJZAS010000194.1 Protein Homology CDS 38538 39434 . - 0 ID=cds-WP_059524478.1;Parent=gene-LDO45_RS19500;Dbxref=GenBank:WP_059524478.1;Name=WP_059524478.1;Ontology_term=GO:0008272,GO:0015419,GO:0005886,GO:0055052;gbkey=CDS;gene=cysT;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transport|0008272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010103892.1;locus_tag=LDO45_RS19500;product=sulfate ABC transporter permease subunit CysT;protein_id=WP_059524478.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 39572 40609 . - . ID=gene-LDO45_RS19505;Name=LDO45_RS19505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19505;old_locus_tag=BDI4_40038 NZ_CAJZAS010000194.1 Protein Homology CDS 39572 40609 . - 0 ID=cds-WP_059524480.1;Parent=gene-LDO45_RS19505;Dbxref=GenBank:WP_059524480.1;Name=WP_059524480.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400148.1;locus_tag=LDO45_RS19505;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_059524480.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 40874 41521 . + . ID=gene-LDO45_RS19510;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=LDO45_RS19510;old_locus_tag=BDI4_40040 NZ_CAJZAS010000194.1 Protein Homology CDS 40874 41521 . + 0 ID=cds-WP_006754655.1;Parent=gene-LDO45_RS19510;Dbxref=GenBank:WP_006754655.1;Name=WP_006754655.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400150.1;locus_tag=LDO45_RS19510;product=transcriptional repressor LexA;protein_id=WP_006754655.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 41548 41886 . + . ID=gene-LDO45_RS19515;Name=LDO45_RS19515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19515;old_locus_tag=BDI4_40039 NZ_CAJZAS010000194.1 Protein Homology CDS 41548 41886 . + 0 ID=cds-WP_040144136.1;Parent=gene-LDO45_RS19515;Dbxref=GenBank:WP_040144136.1;Name=WP_040144136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600929.1;locus_tag=LDO45_RS19515;product=hypothetical protein;protein_id=WP_040144136.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 41916 42620 . + . ID=gene-LDO45_RS19520;Name=LDO45_RS19520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19520;old_locus_tag=BDI4_40041 NZ_CAJZAS010000194.1 Protein Homology CDS 41916 42620 . + 0 ID=cds-WP_223963072.1;Parent=gene-LDO45_RS19520;Dbxref=GenBank:WP_223963072.1;Name=WP_223963072.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545344.1;locus_tag=LDO45_RS19520;product=DUF2939 domain-containing protein;protein_id=WP_223963072.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 42711 43208 . - . ID=gene-LDO45_RS19525;Name=LDO45_RS19525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19525;old_locus_tag=BDI4_40042 NZ_CAJZAS010000194.1 Protein Homology CDS 42711 43208 . - 0 ID=cds-WP_044843612.1;Parent=gene-LDO45_RS19525;Dbxref=GenBank:WP_044843612.1;Name=WP_044843612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351890.1;locus_tag=LDO45_RS19525;product=universal stress protein;protein_id=WP_044843612.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 43539 44453 . + . ID=gene-LDO45_RS19530;Name=nodI;gbkey=Gene;gene=nodI;gene_biotype=protein_coding;locus_tag=LDO45_RS19530;old_locus_tag=BDI4_40044 NZ_CAJZAS010000194.1 Protein Homology CDS 43539 44453 . + 0 ID=cds-WP_059524484.1;Parent=gene-LDO45_RS19530;Dbxref=GenBank:WP_059524484.1;Name=WP_059524484.1;gbkey=CDS;gene=nodI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897117.1;locus_tag=LDO45_RS19530;product=nodulation factor ABC transporter ATP-binding protein NodI;protein_id=WP_059524484.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 44460 45293 . + . ID=gene-LDO45_RS19535;Name=LDO45_RS19535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19535;old_locus_tag=BDI4_40045 NZ_CAJZAS010000194.1 Protein Homology CDS 44460 45293 . + 0 ID=cds-WP_059524486.1;Parent=gene-LDO45_RS19535;Dbxref=GenBank:WP_059524486.1;Name=WP_059524486.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545341.1;locus_tag=LDO45_RS19535;product=ABC transporter permease;protein_id=WP_059524486.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 45345 45767 . - . ID=gene-LDO45_RS19540;Name=LDO45_RS19540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19540;old_locus_tag=BDI4_40046 NZ_CAJZAS010000194.1 Protein Homology CDS 45345 45767 . - 0 ID=cds-WP_059691758.1;Parent=gene-LDO45_RS19540;Dbxref=GenBank:WP_059691758.1;Name=WP_059691758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897119.1;locus_tag=LDO45_RS19540;product=hypothetical protein;protein_id=WP_059691758.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 45991 47049 . - . ID=gene-LDO45_RS19545;Name=LDO45_RS19545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19545;old_locus_tag=BDI4_40047 NZ_CAJZAS010000194.1 Protein Homology CDS 45991 47049 . - 0 ID=cds-WP_059818156.1;Parent=gene-LDO45_RS19545;Dbxref=GenBank:WP_059818156.1;Name=WP_059818156.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400158.1;locus_tag=LDO45_RS19545;product=permease;protein_id=WP_059818156.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 47046 48173 . - . ID=gene-LDO45_RS19550;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=LDO45_RS19550;old_locus_tag=BDI4_40048 NZ_CAJZAS010000194.1 Protein Homology CDS 47046 48173 . - 0 ID=cds-WP_223963074.1;Parent=gene-LDO45_RS19550;Dbxref=GenBank:WP_223963074.1;Name=WP_223963074.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897121.1;locus_tag=LDO45_RS19550;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_223963074.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 48238 49191 . - . ID=gene-LDO45_RS19555;Name=LDO45_RS19555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19555;old_locus_tag=BDI4_40049 NZ_CAJZAS010000194.1 Protein Homology CDS 48238 49191 . - 0 ID=cds-WP_223963075.1;Parent=gene-LDO45_RS19555;Dbxref=GenBank:WP_223963075.1;Name=WP_223963075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416770.1;locus_tag=LDO45_RS19555;product=LysR family transcriptional regulator;protein_id=WP_223963075.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 49357 50778 . + . ID=gene-LDO45_RS19560;Name=LDO45_RS19560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19560;old_locus_tag=BDI4_40051 NZ_CAJZAS010000194.1 Protein Homology CDS 49357 50778 . + 0 ID=cds-WP_223963077.1;Parent=gene-LDO45_RS19560;Dbxref=GenBank:WP_223963077.1;Name=WP_223963077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751000.1;locus_tag=LDO45_RS19560;product=M20 family metallopeptidase;protein_id=WP_223963077.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 50814 52100 . + . ID=gene-LDO45_RS19565;Name=LDO45_RS19565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19565;old_locus_tag=BDI4_40052 NZ_CAJZAS010000194.1 Protein Homology CDS 50814 52100 . + 0 ID=cds-WP_059691763.1;Parent=gene-LDO45_RS19565;Dbxref=GenBank:WP_059691763.1;Name=WP_059691763.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545336.1;locus_tag=LDO45_RS19565;product=MFS transporter;protein_id=WP_059691763.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 52164 53216 . - . ID=gene-LDO45_RS19570;Name=LDO45_RS19570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19570;old_locus_tag=BDI4_40053 NZ_CAJZAS010000194.1 Protein Homology CDS 52164 53216 . - 0 ID=cds-WP_223963079.1;Parent=gene-LDO45_RS19570;Dbxref=GenBank:WP_223963079.1;Name=WP_223963079.1;Ontology_term=GO:0047834;gbkey=CDS;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601897.1;locus_tag=LDO45_RS19570;product=NADP(H)-dependent aldo-keto reductase;protein_id=WP_223963079.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 53412 53849 . - . ID=gene-LDO45_RS19575;Name=LDO45_RS19575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19575;old_locus_tag=BDI4_40054 NZ_CAJZAS010000194.1 Protein Homology CDS 53412 53849 . - 0 ID=cds-WP_059606628.1;Parent=gene-LDO45_RS19575;Dbxref=GenBank:WP_059606628.1;Name=WP_059606628.1;Ontology_term=GO:0016790;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332380.1;locus_tag=LDO45_RS19575;product=PaaI family thioesterase;protein_id=WP_059606628.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 54019 54489 . + . ID=gene-LDO45_RS19580;Name=LDO45_RS19580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19580;old_locus_tag=BDI4_40055 NZ_CAJZAS010000194.1 Protein Homology CDS 54019 54489 . + 0 ID=cds-WP_059691766.1;Parent=gene-LDO45_RS19580;Dbxref=GenBank:WP_059691766.1;Name=WP_059691766.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495227.1;locus_tag=LDO45_RS19580;product=helix-turn-helix domain-containing protein;protein_id=WP_059691766.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 54666 55289 . + . ID=gene-LDO45_RS19585;Name=LDO45_RS19585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19585;old_locus_tag=BDI4_40056 NZ_CAJZAS010000194.1 Protein Homology CDS 54666 55289 . + 0 ID=cds-WP_059524505.1;Parent=gene-LDO45_RS19585;Dbxref=GenBank:WP_059524505.1;Name=WP_059524505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351878.1;locus_tag=LDO45_RS19585;product=phospholipase D family protein;protein_id=WP_059524505.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 55470 55688 . - . ID=gene-LDO45_RS19590;Name=LDO45_RS19590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19590;old_locus_tag=BDI4_40057 NZ_CAJZAS010000194.1 Protein Homology CDS 55470 55688 . - 0 ID=cds-WP_059524507.1;Parent=gene-LDO45_RS19590;Dbxref=GenBank:WP_059524507.1;Name=WP_059524507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884715.1;locus_tag=LDO45_RS19590;product=hypothetical protein;protein_id=WP_059524507.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 55722 55931 . - . ID=gene-LDO45_RS19595;Name=LDO45_RS19595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19595;old_locus_tag=BDI4_40058 NZ_CAJZAS010000194.1 GeneMarkS-2+ CDS 55722 55931 . - 0 ID=cds-WP_059691768.1;Parent=gene-LDO45_RS19595;Dbxref=GenBank:WP_059691768.1;Name=WP_059691768.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS19595;product=hypothetical protein;protein_id=WP_059691768.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 55981 56952 . + . ID=gene-LDO45_RS19600;Name=LDO45_RS19600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19600;old_locus_tag=BDI4_40059 NZ_CAJZAS010000194.1 Protein Homology CDS 55981 56952 . + 0 ID=cds-WP_223963083.1;Parent=gene-LDO45_RS19600;Dbxref=GenBank:WP_223963083.1;Name=WP_223963083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484192.1;locus_tag=LDO45_RS19600;product=diguanylate cyclase;protein_id=WP_223963083.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 57029 57502 . - . ID=gene-LDO45_RS19605;Name=LDO45_RS19605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19605;old_locus_tag=BDI4_40060 NZ_CAJZAS010000194.1 Protein Homology CDS 57029 57502 . - 0 ID=cds-WP_059524512.1;Parent=gene-LDO45_RS19605;Dbxref=GenBank:WP_059524512.1;Name=WP_059524512.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363804.1;locus_tag=LDO45_RS19605;product=VOC family protein;protein_id=WP_059524512.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 57624 57932 . - . ID=gene-LDO45_RS19610;Name=LDO45_RS19610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19610;old_locus_tag=BDI4_40061 NZ_CAJZAS010000194.1 Protein Homology CDS 57624 57932 . - 0 ID=cds-WP_059524514.1;Parent=gene-LDO45_RS19610;Dbxref=GenBank:WP_059524514.1;Name=WP_059524514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400171.1;locus_tag=LDO45_RS19610;product=hypothetical protein;protein_id=WP_059524514.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 58136 58879 . + . ID=gene-LDO45_RS19615;Name=LDO45_RS19615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19615;old_locus_tag=BDI4_40062 NZ_CAJZAS010000194.1 Protein Homology CDS 58136 58879 . + 0 ID=cds-WP_059691771.1;Parent=gene-LDO45_RS19615;Dbxref=GenBank:WP_059691771.1;Name=WP_059691771.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757998.1;locus_tag=LDO45_RS19615;product=DUF695 domain-containing protein;protein_id=WP_059691771.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 59342 59554 . - . ID=gene-LDO45_RS19620;Name=LDO45_RS19620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19620;old_locus_tag=BDI4_40063 NZ_CAJZAS010000194.1 GeneMarkS-2+ CDS 59342 59554 . - 0 ID=cds-WP_223963085.1;Parent=gene-LDO45_RS19620;Dbxref=GenBank:WP_223963085.1;Name=WP_223963085.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS19620;product=hypothetical protein;protein_id=WP_223963085.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 59582 59872 . - . ID=gene-LDO45_RS19625;Name=LDO45_RS19625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19625;old_locus_tag=BDI4_40064 NZ_CAJZAS010000194.1 Protein Homology CDS 59582 59872 . - 0 ID=cds-WP_223963087.1;Parent=gene-LDO45_RS19625;Dbxref=GenBank:WP_223963087.1;Name=WP_223963087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495233.1;locus_tag=LDO45_RS19625;product=hypothetical protein;protein_id=WP_223963087.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 60095 60559 . + . ID=gene-LDO45_RS19630;Name=LDO45_RS19630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19630;old_locus_tag=BDI4_40065 NZ_CAJZAS010000194.1 Protein Homology CDS 60095 60559 . + 0 ID=cds-WP_223963089.1;Parent=gene-LDO45_RS19630;Dbxref=GenBank:WP_223963089.1;Name=WP_223963089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757999.1;locus_tag=LDO45_RS19630;product=hypothetical protein;protein_id=WP_223963089.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq pseudogene 61173 62430 . + . ID=gene-LDO45_RS19635;Name=LDO45_RS19635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS19635;old_locus_tag=BDI4_40066;pseudo=true NZ_CAJZAS010000194.1 Protein Homology CDS 61173 62430 . + 0 ID=cds-LDO45_RS19635;Parent=gene-LDO45_RS19635;Note=frameshifted;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF013884.5;locus_tag=LDO45_RS19635;product=acyltransferase family protein;pseudo=true;transl_table=11 NZ_CAJZAS010000194.1 RefSeq pseudogene 63069 63263 . - . ID=gene-LDO45_RS19640;Name=LDO45_RS19640;end_range=63263,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS19640;old_locus_tag=BDI4_40069;partial=true;pseudo=true NZ_CAJZAS010000194.1 Protein Homology CDS 63069 63263 . - 0 ID=cds-LDO45_RS19640;Parent=gene-LDO45_RS19640;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=63263,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526690.1;locus_tag=LDO45_RS19640;partial=true;product=DUF159 family protein;pseudo=true;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 63436 64293 . + . ID=gene-LDO45_RS19645;Name=LDO45_RS19645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19645;old_locus_tag=BDI4_40070 NZ_CAJZAS010000194.1 Protein Homology CDS 63436 64293 . + 0 ID=cds-WP_223963090.1;Parent=gene-LDO45_RS19645;Dbxref=GenBank:WP_223963090.1;Name=WP_223963090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726331.1;locus_tag=LDO45_RS19645;product=hypothetical protein;protein_id=WP_223963090.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 64550 64843 . + . ID=gene-LDO45_RS19650;Name=LDO45_RS19650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19650;old_locus_tag=BDI4_40071 NZ_CAJZAS010000194.1 Protein Homology CDS 64550 64843 . + 0 ID=cds-WP_223963092.1;Parent=gene-LDO45_RS19650;Dbxref=GenBank:WP_223963092.1;Name=WP_223963092.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009905234.1;locus_tag=LDO45_RS19650;product=hypothetical protein;protein_id=WP_223963092.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 64857 65000 . + . ID=gene-LDO45_RS19655;Name=LDO45_RS19655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19655 NZ_CAJZAS010000194.1 Protein Homology CDS 64857 65000 . + 0 ID=cds-WP_223963147.1;Parent=gene-LDO45_RS19655;Dbxref=GenBank:WP_223963147.1;Name=WP_223963147.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010118399.1;locus_tag=LDO45_RS19655;product=HHHH-motif protein;protein_id=WP_223963147.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 66650 67147 . - . ID=gene-LDO45_RS19660;Name=LDO45_RS19660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19660;old_locus_tag=BDI4_40073 NZ_CAJZAS010000194.1 GeneMarkS-2+ CDS 66650 67147 . - 0 ID=cds-WP_223963094.1;Parent=gene-LDO45_RS19660;Dbxref=GenBank:WP_223963094.1;Name=WP_223963094.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS19660;product=hypothetical protein;protein_id=WP_223963094.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 67131 67616 . - . ID=gene-LDO45_RS19665;Name=LDO45_RS19665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19665;old_locus_tag=BDI4_40074 NZ_CAJZAS010000194.1 GeneMarkS-2+ CDS 67131 67616 . - 0 ID=cds-WP_223963149.1;Parent=gene-LDO45_RS19665;Dbxref=GenBank:WP_223963149.1;Name=WP_223963149.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS19665;product=hypothetical protein;protein_id=WP_223963149.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 68020 68838 . - . ID=gene-LDO45_RS19675;Name=LDO45_RS19675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19675;old_locus_tag=BDI4_40076 NZ_CAJZAS010000194.1 Protein Homology CDS 68020 68838 . - 0 ID=cds-WP_223963097.1;Parent=gene-LDO45_RS19675;Dbxref=GenBank:WP_223963097.1;Name=WP_223963097.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367283.1;locus_tag=LDO45_RS19675;product=FkbM family methyltransferase;protein_id=WP_223963097.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq pseudogene 69345 69513 . - . ID=gene-LDO45_RS19680;Name=LDO45_RS19680;end_range=69513,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS19680;partial=true;pseudo=true;start_range=.,69345 NZ_CAJZAS010000194.1 Protein Homology CDS 69345 69513 . - 0 ID=cds-LDO45_RS19680;Parent=gene-LDO45_RS19680;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=69513,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558218.1;locus_tag=LDO45_RS19680;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,69345;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 69925 70233 . - . ID=gene-LDO45_RS19685;Name=LDO45_RS19685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19685;old_locus_tag=BDI4_40078 NZ_CAJZAS010000194.1 Protein Homology CDS 69925 70233 . - 0 ID=cds-WP_223963099.1;Parent=gene-LDO45_RS19685;Dbxref=GenBank:WP_223963099.1;Name=WP_223963099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008919150.1;locus_tag=LDO45_RS19685;product=hypothetical protein;protein_id=WP_223963099.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 70235 70630 . - . ID=gene-LDO45_RS19690;Name=LDO45_RS19690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19690;old_locus_tag=BDI4_40079 NZ_CAJZAS010000194.1 GeneMarkS-2+ CDS 70235 70630 . - 0 ID=cds-WP_223963101.1;Parent=gene-LDO45_RS19690;Dbxref=GenBank:WP_223963101.1;Name=WP_223963101.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS19690;product=hypothetical protein;protein_id=WP_223963101.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 70658 70822 . - . ID=gene-LDO45_RS19695;Name=LDO45_RS19695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19695 NZ_CAJZAS010000194.1 GeneMarkS-2+ CDS 70658 70822 . - 0 ID=cds-WP_223963107.1;Parent=gene-LDO45_RS19695;Dbxref=GenBank:WP_223963107.1;Name=WP_223963107.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS19695;product=hypothetical protein;protein_id=WP_223963107.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 71414 72136 . + . ID=gene-LDO45_RS19700;Name=LDO45_RS19700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19700;old_locus_tag=BDI4_40081 NZ_CAJZAS010000194.1 GeneMarkS-2+ CDS 71414 72136 . + 0 ID=cds-WP_223963109.1;Parent=gene-LDO45_RS19700;Dbxref=GenBank:WP_223963109.1;Name=WP_223963109.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS19700;product=hypothetical protein;protein_id=WP_223963109.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 72162 72237 . - . ID=gene-LDO45_RS19705;Name=LDO45_RS19705;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS19705;old_locus_tag=BDI4_TRNA51 NZ_CAJZAS010000194.1 tRNAscan-SE tRNA 72162 72237 . - . ID=rna-LDO45_RS19705;Parent=gene-LDO45_RS19705;anticodon=(pos:complement(72202..72204));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS19705;product=tRNA-His NZ_CAJZAS010000194.1 tRNAscan-SE exon 72162 72237 . - . ID=exon-LDO45_RS19705-1;Parent=rna-LDO45_RS19705;anticodon=(pos:complement(72202..72204));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS19705;product=tRNA-His NZ_CAJZAS010000194.1 RefSeq gene 72297 73283 . - . ID=gene-LDO45_RS19710;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=LDO45_RS19710;old_locus_tag=BDI4_40083 NZ_CAJZAS010000194.1 Protein Homology CDS 72297 73283 . - 0 ID=cds-WP_059691775.1;Parent=gene-LDO45_RS19710;Dbxref=GenBank:WP_059691775.1;Name=WP_059691775.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491499.1;locus_tag=LDO45_RS19710;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_059691775.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 73410 73664 . - . ID=gene-LDO45_RS19715;Name=LDO45_RS19715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19715;old_locus_tag=BDI4_40084 NZ_CAJZAS010000194.1 Protein Homology CDS 73410 73664 . - 0 ID=cds-WP_059524526.1;Parent=gene-LDO45_RS19715;Dbxref=GenBank:WP_059524526.1;Name=WP_059524526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758003.1;locus_tag=LDO45_RS19715;product=hypothetical protein;protein_id=WP_059524526.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 73719 73916 . - . ID=gene-LDO45_RS19720;Name=LDO45_RS19720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19720;old_locus_tag=BDI4_40085 NZ_CAJZAS010000194.1 Protein Homology CDS 73719 73916 . - 0 ID=cds-WP_059467585.1;Parent=gene-LDO45_RS19720;Dbxref=GenBank:WP_059467585.1;Name=WP_059467585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010110042.1;locus_tag=LDO45_RS19720;product=hypothetical protein;protein_id=WP_059467585.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 74057 74272 . - . ID=gene-LDO45_RS19725;Name=LDO45_RS19725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19725;old_locus_tag=BDI4_40086 NZ_CAJZAS010000194.1 Protein Homology CDS 74057 74272 . - 0 ID=cds-WP_006400187.1;Parent=gene-LDO45_RS19725;Dbxref=GenBank:WP_006400187.1;Name=WP_006400187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007588023.1;locus_tag=LDO45_RS19725;product=molybdopterin-binding protein;protein_id=WP_006400187.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 74328 75287 . - . ID=gene-LDO45_RS19730;Name=LDO45_RS19730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19730;old_locus_tag=BDI4_40087 NZ_CAJZAS010000194.1 Protein Homology CDS 74328 75287 . - 0 ID=cds-WP_059818124.1;Parent=gene-LDO45_RS19730;Dbxref=GenBank:WP_059818124.1;Name=WP_059818124.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009905621.1;locus_tag=LDO45_RS19730;product=ATP-binding cassette domain-containing protein;protein_id=WP_059818124.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 75284 76096 . - . ID=gene-LDO45_RS19735;Name=ssuC;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=LDO45_RS19735;old_locus_tag=BDI4_40088 NZ_CAJZAS010000194.1 Protein Homology CDS 75284 76096 . - 0 ID=cds-WP_059691777.1;Parent=gene-LDO45_RS19735;Dbxref=GenBank:WP_059691777.1;Name=WP_059691777.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=ssuC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897155.1;locus_tag=LDO45_RS19735;product=aliphatic sulfonate ABC transporter permease SsuC;protein_id=WP_059691777.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 76113 77270 . - . ID=gene-LDO45_RS19740;Name=ssuD;gbkey=Gene;gene=ssuD;gene_biotype=protein_coding;locus_tag=LDO45_RS19740;old_locus_tag=BDI4_40089 NZ_CAJZAS010000194.1 Protein Homology CDS 76113 77270 . - 0 ID=cds-WP_223963112.1;Parent=gene-LDO45_RS19740;Dbxref=GenBank:WP_223963112.1;Name=WP_223963112.1;Ontology_term=GO:0006790,GO:0008726,GO:0010181;gbkey=CDS;gene=ssuD;go_function=alkanesulfonate monooxygenase activity|0008726||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722969.1;locus_tag=LDO45_RS19740;product=FMNH2-dependent alkanesulfonate monooxygenase;protein_id=WP_223963112.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 77612 78040 . + . ID=gene-LDO45_RS19745;Name=LDO45_RS19745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19745;old_locus_tag=BDI4_40092 NZ_CAJZAS010000194.1 Protein Homology CDS 77612 78040 . + 0 ID=cds-WP_059524561.1;Parent=gene-LDO45_RS19745;Dbxref=GenBank:WP_059524561.1;Name=WP_059524561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722967.1;locus_tag=LDO45_RS19745;product=hypothetical protein;protein_id=WP_059524561.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 78165 79313 . - . ID=gene-LDO45_RS19750;Name=LDO45_RS19750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19750;old_locus_tag=BDI4_40093 NZ_CAJZAS010000194.1 Protein Homology CDS 78165 79313 . - 0 ID=cds-WP_223963114.1;Parent=gene-LDO45_RS19750;Dbxref=GenBank:WP_223963114.1;Name=WP_223963114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404891.1;locus_tag=LDO45_RS19750;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_223963114.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 79345 79683 . - . ID=gene-LDO45_RS19755;Name=LDO45_RS19755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19755;old_locus_tag=BDI4_40094 NZ_CAJZAS010000194.1 Protein Homology CDS 79345 79683 . - 0 ID=cds-WP_014897159.1;Parent=gene-LDO45_RS19755;Dbxref=GenBank:WP_014897159.1;Name=WP_014897159.1;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891379.1;locus_tag=LDO45_RS19755;product=multidrug efflux SMR transporter;protein_id=WP_014897159.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 79687 80184 . - . ID=gene-LDO45_RS19760;Name=LDO45_RS19760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19760;old_locus_tag=BDI4_40095 NZ_CAJZAS010000194.1 Protein Homology CDS 79687 80184 . - 0 ID=cds-WP_223963122.1;Parent=gene-LDO45_RS19760;Dbxref=GenBank:WP_223963122.1;Name=WP_223963122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092484.1;locus_tag=LDO45_RS19760;product=heme-degrading domain-containing protein;protein_id=WP_223963122.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 80400 80476 . + . ID=gene-LDO45_RS19765;Name=LDO45_RS19765;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS19765;old_locus_tag=BDI4_TRNA1 NZ_CAJZAS010000194.1 tRNAscan-SE tRNA 80400 80476 . + . ID=rna-LDO45_RS19765;Parent=gene-LDO45_RS19765;anticodon=(pos:80434..80436);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS19765;product=tRNA-Met NZ_CAJZAS010000194.1 tRNAscan-SE exon 80400 80476 . + . ID=exon-LDO45_RS19765-1;Parent=rna-LDO45_RS19765;anticodon=(pos:80434..80436);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS19765;product=tRNA-Met NZ_CAJZAS010000194.1 RefSeq gene 80649 81194 . + . ID=gene-LDO45_RS19770;Name=LDO45_RS19770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19770;old_locus_tag=BDI4_40096 NZ_CAJZAS010000194.1 Protein Homology CDS 80649 81194 . + 0 ID=cds-WP_059532907.1;Parent=gene-LDO45_RS19770;Dbxref=GenBank:WP_059532907.1;Name=WP_059532907.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897161.1;locus_tag=LDO45_RS19770;product=NUDIX hydrolase;protein_id=WP_059532907.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 81206 81970 . + . ID=gene-LDO45_RS19775;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=LDO45_RS19775;old_locus_tag=BDI4_40097 NZ_CAJZAS010000194.1 Protein Homology CDS 81206 81970 . + 0 ID=cds-WP_223963132.1;Parent=gene-LDO45_RS19775;Dbxref=GenBank:WP_223963132.1;Name=WP_223963132.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414405.1;locus_tag=LDO45_RS19775;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_223963132.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 82004 82834 . + . ID=gene-LDO45_RS19780;Name=LDO45_RS19780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19780;old_locus_tag=BDI4_40098 NZ_CAJZAS010000194.1 Protein Homology CDS 82004 82834 . + 0 ID=cds-WP_124522241.1;Parent=gene-LDO45_RS19780;Dbxref=GenBank:WP_124522241.1;Name=WP_124522241.1;Ontology_term=GO:0016598,GO:0004057;gbkey=CDS;go_function=arginyl-tRNA--protein transferase activity|0004057||IEA;go_process=protein arginylation|0016598||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897163.1;locus_tag=LDO45_RS19780;product=arginyltransferase;protein_id=WP_124522241.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 83013 84050 . + . ID=gene-LDO45_RS19785;Name=LDO45_RS19785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19785;old_locus_tag=BDI4_40099 NZ_CAJZAS010000194.1 Protein Homology CDS 83013 84050 . + 0 ID=cds-WP_223963134.1;Parent=gene-LDO45_RS19785;Dbxref=GenBank:WP_223963134.1;Name=WP_223963134.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400200.1;locus_tag=LDO45_RS19785;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_223963134.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 84153 84947 . + . ID=gene-LDO45_RS19790;Name=LDO45_RS19790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19790;old_locus_tag=BDI4_40100 NZ_CAJZAS010000194.1 Protein Homology CDS 84153 84947 . + 0 ID=cds-WP_059691782.1;Parent=gene-LDO45_RS19790;Dbxref=GenBank:WP_059691782.1;Name=WP_059691782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884668.1;locus_tag=LDO45_RS19790;product=cystine ABC transporter substrate-binding protein;protein_id=WP_059691782.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 85070 85762 . + . ID=gene-LDO45_RS19795;Name=LDO45_RS19795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19795;old_locus_tag=BDI4_40101 NZ_CAJZAS010000194.1 Protein Homology CDS 85070 85762 . + 0 ID=cds-WP_009695834.1;Parent=gene-LDO45_RS19795;Dbxref=GenBank:WP_009695834.1;Name=WP_009695834.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521640.1;locus_tag=LDO45_RS19795;product=amino acid ABC transporter permease;protein_id=WP_009695834.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 85825 86811 . - . ID=gene-LDO45_RS19800;Name=LDO45_RS19800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19800;old_locus_tag=BDI4_40102 NZ_CAJZAS010000194.1 Protein Homology CDS 85825 86811 . - 0 ID=cds-WP_223963136.1;Parent=gene-LDO45_RS19800;Dbxref=GenBank:WP_223963136.1;Name=WP_223963136.1;Ontology_term=GO:0016491,GO:0016651;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758017.1;locus_tag=LDO45_RS19800;product=Gfo/Idh/MocA family protein;protein_id=WP_223963136.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 86913 87629 . - . ID=gene-LDO45_RS19805;Name=LDO45_RS19805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19805;old_locus_tag=BDI4_40103 NZ_CAJZAS010000194.1 Protein Homology CDS 86913 87629 . - 0 ID=cds-WP_059691784.1;Parent=gene-LDO45_RS19805;Dbxref=GenBank:WP_059691784.1;Name=WP_059691784.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884662.1;locus_tag=LDO45_RS19805;product=FadR/GntR family transcriptional regulator;protein_id=WP_059691784.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 87913 88605 . - . ID=gene-LDO45_RS19810;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=LDO45_RS19810;old_locus_tag=BDI4_40104 NZ_CAJZAS010000194.1 Protein Homology CDS 87913 88605 . - 0 ID=cds-WP_059691785.1;Parent=gene-LDO45_RS19810;Dbxref=GenBank:WP_059691785.1;Name=WP_059691785.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363785.1;locus_tag=LDO45_RS19810;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_059691785.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 88713 89585 . - . ID=gene-LDO45_RS19815;Name=LDO45_RS19815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19815;old_locus_tag=BDI4_40105 NZ_CAJZAS010000194.1 Protein Homology CDS 88713 89585 . - 0 ID=cds-WP_223963137.1;Parent=gene-LDO45_RS19815;Dbxref=GenBank:WP_223963137.1;Name=WP_223963137.1;Ontology_term=GO:0071555,GO:0008270,GO:0008745;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476120.1;locus_tag=LDO45_RS19815;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_223963137.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 89689 90432 . - . ID=gene-LDO45_RS19820;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=LDO45_RS19820;old_locus_tag=BDI4_40106 NZ_CAJZAS010000194.1 Protein Homology CDS 89689 90432 . - 0 ID=cds-WP_059467602.1;Parent=gene-LDO45_RS19820;Dbxref=GenBank:WP_059467602.1;Name=WP_059467602.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884657.1;locus_tag=LDO45_RS19820;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_059467602.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 90584 93046 . - . ID=gene-LDO45_RS19825;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=LDO45_RS19825;old_locus_tag=BDI4_40107 NZ_CAJZAS010000194.1 Protein Homology CDS 90584 93046 . - 0 ID=cds-WP_059532933.1;Parent=gene-LDO45_RS19825;Dbxref=GenBank:WP_059532933.1;Name=WP_059532933.1;Ontology_term=GO:0003723,GO:0004518;gbkey=CDS;gene=rnr;go_function=RNA binding|0003723||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404898.1;locus_tag=LDO45_RS19825;product=ribonuclease R;protein_id=WP_059532933.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 93296 93382 . + . ID=gene-LDO45_RS19830;Name=LDO45_RS19830;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS19830;old_locus_tag=BDI4_TRNA2 NZ_CAJZAS010000194.1 tRNAscan-SE tRNA 93296 93382 . + . ID=rna-LDO45_RS19830;Parent=gene-LDO45_RS19830;anticodon=(pos:93330..93332);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS19830;product=tRNA-Leu NZ_CAJZAS010000194.1 tRNAscan-SE exon 93296 93382 . + . ID=exon-LDO45_RS19830-1;Parent=rna-LDO45_RS19830;anticodon=(pos:93330..93332);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS19830;product=tRNA-Leu NZ_CAJZAS010000194.1 RefSeq gene 93439 93804 . - . ID=gene-LDO45_RS34600;Name=LDO45_RS34600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34600;old_locus_tag=BDI4_40109 NZ_CAJZAS010000194.1 GeneMarkS-2+ CDS 93439 93804 . - 0 ID=cds-WP_223963139.1;Parent=gene-LDO45_RS34600;Dbxref=GenBank:WP_223963139.1;Name=WP_223963139.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34600;product=hypothetical protein;protein_id=WP_223963139.1;transl_table=11 NZ_CAJZAS010000194.1 RefSeq gene 93941 94027 . + . ID=gene-LDO45_RS19840;Name=LDO45_RS19840;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS19840;old_locus_tag=BDI4_TRNA3 NZ_CAJZAS010000194.1 tRNAscan-SE tRNA 93941 94027 . + . ID=rna-LDO45_RS19840;Parent=gene-LDO45_RS19840;anticodon=(pos:93975..93977);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS19840;product=tRNA-Leu NZ_CAJZAS010000194.1 tRNAscan-SE exon 93941 94027 . + . ID=exon-LDO45_RS19840-1;Parent=rna-LDO45_RS19840;anticodon=(pos:93975..93977);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS19840;product=tRNA-Leu ##sequence-region NZ_CAJZAS010000195.1 1 111052 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000195.1 RefSeq region 1 111052 . + . ID=NZ_CAJZAS010000195.1:1..111052;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_40 NZ_CAJZAS010000195.1 RefSeq gene 1 623 . - . ID=gene-LDO45_RS19845;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=LDO45_RS19845;partial=true;start_range=.,1 NZ_CAJZAS010000195.1 Protein Homology CDS 1 623 . - 0 ID=cds-WP_223963160.1;Parent=gene-LDO45_RS19845;Dbxref=GenBank:WP_223963160.1;Name=WP_223963160.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851961.1;locus_tag=LDO45_RS19845;partial=true;product=ribonuclease III;protein_id=WP_223963160.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 777 1670 . - . ID=gene-LDO45_RS19850;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=LDO45_RS19850;old_locus_tag=BDI4_400002 NZ_CAJZAS010000195.1 Protein Homology CDS 777 1670 . - 0 ID=cds-WP_223963162.1;Parent=gene-LDO45_RS19850;Dbxref=GenBank:WP_223963162.1;Name=WP_223963162.1;Ontology_term=GO:0006465,GO:0009306,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890017.1;locus_tag=LDO45_RS19850;product=signal peptidase I;protein_id=WP_223963162.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 1687 3480 . - . ID=gene-LDO45_RS19855;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=LDO45_RS19855;old_locus_tag=BDI4_400003 NZ_CAJZAS010000195.1 Protein Homology CDS 1687 3480 . - 0 ID=cds-WP_021159691.1;Parent=gene-LDO45_RS19855;Dbxref=GenBank:WP_021159691.1;Name=WP_021159691.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897649.1;locus_tag=LDO45_RS19855;product=translation elongation factor 4;protein_id=WP_021159691.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 3697 3933 . - . ID=gene-LDO45_RS19860;Name=LDO45_RS19860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19860;old_locus_tag=BDI4_400004 NZ_CAJZAS010000195.1 Protein Homology CDS 3697 3933 . - 0 ID=cds-WP_223963164.1;Parent=gene-LDO45_RS19860;Dbxref=GenBank:WP_223963164.1;Name=WP_223963164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476497.1;locus_tag=LDO45_RS19860;product=glutaredoxin family protein;protein_id=WP_223963164.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 3941 5446 . - . ID=gene-LDO45_RS19865;Name=LDO45_RS19865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19865;old_locus_tag=BDI4_400005 NZ_CAJZAS010000195.1 Protein Homology CDS 3941 5446 . - 0 ID=cds-WP_223963166.1;Parent=gene-LDO45_RS19865;Dbxref=GenBank:WP_223963166.1;Name=WP_223963166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363407.1;locus_tag=LDO45_RS19865;product=DegQ family serine endoprotease;protein_id=WP_223963166.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 5463 6515 . - . ID=gene-LDO45_RS19870;Name=LDO45_RS19870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19870;old_locus_tag=BDI4_400006 NZ_CAJZAS010000195.1 Protein Homology CDS 5463 6515 . - 0 ID=cds-WP_223963168.1;Parent=gene-LDO45_RS19870;Dbxref=GenBank:WP_223963168.1;Name=WP_223963168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192760.1;locus_tag=LDO45_RS19870;product=MucB/RseB C-terminal domain-containing protein;protein_id=WP_223963168.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 6521 7138 . - . ID=gene-LDO45_RS19875;Name=LDO45_RS19875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19875;old_locus_tag=BDI4_400007 NZ_CAJZAS010000195.1 Protein Homology CDS 6521 7138 . - 0 ID=cds-WP_059523722.1;Parent=gene-LDO45_RS19875;Dbxref=GenBank:WP_059523722.1;Name=WP_059523722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415543.1;locus_tag=LDO45_RS19875;product=sigma-E factor negative regulatory protein;protein_id=WP_059523722.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 7227 7826 . - . ID=gene-LDO45_RS19880;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=LDO45_RS19880;old_locus_tag=BDI4_400008 NZ_CAJZAS010000195.1 Protein Homology CDS 7227 7826 . - 0 ID=cds-WP_006752490.1;Parent=gene-LDO45_RS19880;Dbxref=GenBank:WP_006752490.1;Name=WP_006752490.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883961.1;locus_tag=LDO45_RS19880;product=RNA polymerase sigma factor RpoE;protein_id=WP_006752490.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 7918 8382 . - . ID=gene-LDO45_RS19885;Name=LDO45_RS19885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19885;old_locus_tag=BDI4_400009 NZ_CAJZAS010000195.1 Protein Homology CDS 7918 8382 . - 0 ID=cds-WP_223963170.1;Parent=gene-LDO45_RS19885;Dbxref=GenBank:WP_223963170.1;Name=WP_223963170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213793.1;locus_tag=LDO45_RS19885;product=protein YgfX;protein_id=WP_223963170.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 8394 9626 . - . ID=gene-LDO45_RS19890;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=LDO45_RS19890;old_locus_tag=BDI4_400010 NZ_CAJZAS010000195.1 Protein Homology CDS 8394 9626 . - 0 ID=cds-WP_059691082.1;Parent=gene-LDO45_RS19890;Dbxref=GenBank:WP_059691082.1;Name=WP_059691082.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752488.1;locus_tag=LDO45_RS19890;product=beta-ketoacyl-ACP synthase II;protein_id=WP_059691082.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 9789 10028 . - . ID=gene-LDO45_RS19895;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=LDO45_RS19895;old_locus_tag=BDI4_400011 NZ_CAJZAS010000195.1 Protein Homology CDS 9789 10028 . - 0 ID=cds-WP_004197638.1;Parent=gene-LDO45_RS19895;Dbxref=GenBank:WP_004197638.1;Name=WP_004197638.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012735022.1;locus_tag=LDO45_RS19895;product=acyl carrier protein;protein_id=WP_004197638.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 10173 10922 . - . ID=gene-LDO45_RS19900;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=LDO45_RS19900;old_locus_tag=BDI4_400012 NZ_CAJZAS010000195.1 Protein Homology CDS 10173 10922 . - 0 ID=cds-WP_059702491.1;Parent=gene-LDO45_RS19900;Dbxref=GenBank:WP_059702491.1;Name=WP_059702491.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192016.1;locus_tag=LDO45_RS19900;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_059702491.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 10959 11891 . - . ID=gene-LDO45_RS19905;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=LDO45_RS19905;old_locus_tag=BDI4_400013 NZ_CAJZAS010000195.1 Protein Homology CDS 10959 11891 . - 0 ID=cds-WP_223963171.1;Parent=gene-LDO45_RS19905;Dbxref=GenBank:WP_223963171.1;Name=WP_223963171.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025800.1;locus_tag=LDO45_RS19905;product=ACP S-malonyltransferase;protein_id=WP_223963171.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 11977 12966 . - . ID=gene-LDO45_RS19910;Name=LDO45_RS19910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19910;old_locus_tag=BDI4_400014 NZ_CAJZAS010000195.1 Protein Homology CDS 11977 12966 . - 0 ID=cds-WP_059816060.1;Parent=gene-LDO45_RS19910;Dbxref=GenBank:WP_059816060.1;Name=WP_059816060.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010105339.1;locus_tag=LDO45_RS19910;product=beta-ketoacyl-ACP synthase III;protein_id=WP_059816060.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 12967 14073 . - . ID=gene-LDO45_RS19915;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=LDO45_RS19915;old_locus_tag=BDI4_400015 NZ_CAJZAS010000195.1 Protein Homology CDS 12967 14073 . - 0 ID=cds-WP_057928056.1;Parent=gene-LDO45_RS19915;Dbxref=GenBank:WP_057928056.1;Name=WP_057928056.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764798.1;locus_tag=LDO45_RS19915;product=phosphate acyltransferase PlsX;protein_id=WP_057928056.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 14203 14382 . - . ID=gene-LDO45_RS19920;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=LDO45_RS19920;old_locus_tag=BDI4_400016 NZ_CAJZAS010000195.1 Protein Homology CDS 14203 14382 . - 0 ID=cds-WP_006051932.1;Parent=gene-LDO45_RS19920;Dbxref=GenBank:WP_006051932.1;Name=WP_006051932.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889986.1;locus_tag=LDO45_RS19920;product=50S ribosomal protein L32;protein_id=WP_006051932.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 14481 15116 . - . ID=gene-LDO45_RS19925;Name=LDO45_RS19925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19925;old_locus_tag=BDI4_400017 NZ_CAJZAS010000195.1 Protein Homology CDS 14481 15116 . - 0 ID=cds-WP_059702495.1;Parent=gene-LDO45_RS19925;Dbxref=GenBank:WP_059702495.1;Name=WP_059702495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656341.1;locus_tag=LDO45_RS19925;product=DUF177 domain-containing protein;protein_id=WP_059702495.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 15372 16001 . + . ID=gene-LDO45_RS19930;Name=LDO45_RS19930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19930;old_locus_tag=BDI4_400018 NZ_CAJZAS010000195.1 Protein Homology CDS 15372 16001 . + 0 ID=cds-WP_059816066.1;Parent=gene-LDO45_RS19930;Dbxref=GenBank:WP_059816066.1;Name=WP_059816066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489696.1;locus_tag=LDO45_RS19930;product=Maf-like protein;protein_id=WP_059816066.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 15998 16720 . + . ID=gene-LDO45_RS19935;Name=LDO45_RS19935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19935;old_locus_tag=BDI4_400019 NZ_CAJZAS010000195.1 Protein Homology CDS 15998 16720 . + 0 ID=cds-WP_059523739.1;Parent=gene-LDO45_RS19935;Dbxref=GenBank:WP_059523739.1;Name=WP_059523739.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883942.1;locus_tag=LDO45_RS19935;product=SAM-dependent methyltransferase;protein_id=WP_059523739.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 16793 17785 . - . ID=gene-LDO45_RS19940;Name=LDO45_RS19940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19940;old_locus_tag=BDI4_400020 NZ_CAJZAS010000195.1 Protein Homology CDS 16793 17785 . - 0 ID=cds-WP_223963174.1;Parent=gene-LDO45_RS19940;Dbxref=GenBank:WP_223963174.1;Name=WP_223963174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351398.1;locus_tag=LDO45_RS19940;product=S49 family peptidase;protein_id=WP_223963174.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 17798 18208 . - . ID=gene-LDO45_RS19945;Name=LDO45_RS19945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19945;old_locus_tag=BDI4_400021 NZ_CAJZAS010000195.1 Protein Homology CDS 17798 18208 . - 0 ID=cds-WP_059523743.1;Parent=gene-LDO45_RS19945;Dbxref=GenBank:WP_059523743.1;Name=WP_059523743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493745.1;locus_tag=LDO45_RS19945;product=Rieske 2Fe-2S domain-containing protein;protein_id=WP_059523743.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 18205 18864 . - . ID=gene-LDO45_RS19950;Name=LDO45_RS19950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19950;old_locus_tag=BDI4_400022 NZ_CAJZAS010000195.1 Protein Homology CDS 18205 18864 . - 0 ID=cds-WP_059702503.1;Parent=gene-LDO45_RS19950;Dbxref=GenBank:WP_059702503.1;Name=WP_059702503.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904464.1;locus_tag=LDO45_RS19950;product=HAD-IA family hydrolase;protein_id=WP_059702503.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 18870 19874 . - . ID=gene-LDO45_RS19955;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=LDO45_RS19955;old_locus_tag=BDI4_400023 NZ_CAJZAS010000195.1 Protein Homology CDS 18870 19874 . - 0 ID=cds-WP_059702505.1;Parent=gene-LDO45_RS19955;Dbxref=GenBank:WP_059702505.1;Name=WP_059702505.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467543.1;locus_tag=LDO45_RS19955;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_059702505.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 20598 23732 . + . ID=gene-LDO45_RS19960;Name=LDO45_RS19960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19960;old_locus_tag=BDI4_400025 NZ_CAJZAS010000195.1 Protein Homology CDS 20598 23732 . + 0 ID=cds-WP_223963176.1;Parent=gene-LDO45_RS19960;Dbxref=GenBank:WP_223963176.1;Name=WP_223963176.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544929.1;locus_tag=LDO45_RS19960;product=Rne/Rng family ribonuclease;protein_id=WP_223963176.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 23864 24976 . + . ID=gene-LDO45_RS19965;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=LDO45_RS19965;old_locus_tag=BDI4_400026 NZ_CAJZAS010000195.1 Protein Homology CDS 23864 24976 . + 0 ID=cds-WP_223963272.1;Parent=gene-LDO45_RS19965;Dbxref=GenBank:WP_223963272.1;Name=WP_223963272.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213801.1;locus_tag=LDO45_RS19965;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_223963272.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 25005 25622 . + . ID=gene-LDO45_RS19970;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=LDO45_RS19970;old_locus_tag=BDI4_400027 NZ_CAJZAS010000195.1 Protein Homology CDS 25005 25622 . + 0 ID=cds-WP_223963178.1;Parent=gene-LDO45_RS19970;Dbxref=GenBank:WP_223963178.1;Name=WP_223963178.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488635.1;locus_tag=LDO45_RS19970;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_223963178.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 25728 27023 . + . ID=gene-LDO45_RS19975;Name=glp;gbkey=Gene;gene=glp;gene_biotype=protein_coding;locus_tag=LDO45_RS19975;old_locus_tag=BDI4_400028 NZ_CAJZAS010000195.1 Protein Homology CDS 25728 27023 . + 0 ID=cds-WP_059691073.1;Parent=gene-LDO45_RS19975;Dbxref=GenBank:WP_059691073.1;Name=WP_059691073.1;Ontology_term=GO:0006777,GO:0061599,GO:1990586;gbkey=CDS;gene=glp;go_component=divisome complex|1990586||IEA;go_function=molybdopterin molybdotransferase activity|0061599||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883925.1;locus_tag=LDO45_RS19975;product=gephyrin-like molybdotransferase Glp;protein_id=WP_059691073.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 27061 27336 . + . ID=gene-LDO45_RS19980;Name=LDO45_RS19980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19980;old_locus_tag=BDI4_400029 NZ_CAJZAS010000195.1 Protein Homology CDS 27061 27336 . + 0 ID=cds-WP_006476519.1;Parent=gene-LDO45_RS19980;Dbxref=GenBank:WP_006476519.1;Name=WP_006476519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192965.1;locus_tag=LDO45_RS19980;product=hypothetical protein;protein_id=WP_006476519.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 27333 27818 . + . ID=gene-LDO45_RS19985;Name=LDO45_RS19985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19985;old_locus_tag=BDI4_400030 NZ_CAJZAS010000195.1 Protein Homology CDS 27333 27818 . + 0 ID=cds-WP_223963179.1;Parent=gene-LDO45_RS19985;Dbxref=GenBank:WP_223963179.1;Name=WP_223963179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757678.1;locus_tag=LDO45_RS19985;product=GNAT family N-acetyltransferase;protein_id=WP_223963179.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 27915 29393 . - . ID=gene-LDO45_RS19990;Name=LDO45_RS19990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19990;old_locus_tag=BDI4_400031 NZ_CAJZAS010000195.1 Protein Homology CDS 27915 29393 . - 0 ID=cds-WP_223963181.1;Parent=gene-LDO45_RS19990;Dbxref=GenBank:WP_223963181.1;Name=WP_223963181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476522.1;locus_tag=LDO45_RS19990;product=DNA recombination protein RmuC;protein_id=WP_223963181.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 29390 30379 . - . ID=gene-LDO45_RS19995;Name=LDO45_RS19995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS19995;old_locus_tag=BDI4_400032 NZ_CAJZAS010000195.1 Protein Homology CDS 29390 30379 . - 0 ID=cds-WP_059523843.1;Parent=gene-LDO45_RS19995;Dbxref=GenBank:WP_059523843.1;Name=WP_059523843.1;Ontology_term=GO:0008465,GO:0051287;gbkey=CDS;go_function=hydroxypyruvate reductase (NADH) activity|0008465||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544923.1;locus_tag=LDO45_RS19995;product=D-glycerate dehydrogenase;protein_id=WP_059523843.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 30461 31891 . - . ID=gene-LDO45_RS20000;Name=LDO45_RS20000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20000;old_locus_tag=BDI4_400033 NZ_CAJZAS010000195.1 Protein Homology CDS 30461 31891 . - 0 ID=cds-WP_223963183.1;Parent=gene-LDO45_RS20000;Dbxref=GenBank:WP_223963183.1;Name=WP_223963183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764816.1;locus_tag=LDO45_RS20000;product=sodium:proton antiporter;protein_id=WP_223963183.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 31944 32606 . - . ID=gene-LDO45_RS20005;Name=LDO45_RS20005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20005;old_locus_tag=BDI4_400034 NZ_CAJZAS010000195.1 Protein Homology CDS 31944 32606 . - 0 ID=cds-WP_059523763.1;Parent=gene-LDO45_RS20005;Dbxref=GenBank:WP_059523763.1;Name=WP_059523763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363387.1;locus_tag=LDO45_RS20005;product=lactate utilization protein C;protein_id=WP_059523763.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 32693 33892 . - . ID=gene-LDO45_RS20010;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=LDO45_RS20010;old_locus_tag=BDI4_400035 NZ_CAJZAS010000195.1 Protein Homology CDS 32693 33892 . - 0 ID=cds-WP_059523765.1;Parent=gene-LDO45_RS20010;Dbxref=GenBank:WP_059523765.1;Name=WP_059523765.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656325.1;locus_tag=LDO45_RS20010;product=nicotinate phosphoribosyltransferase;protein_id=WP_059523765.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 34182 34505 . + . ID=gene-LDO45_RS20015;Name=fdxA;gbkey=Gene;gene=fdxA;gene_biotype=protein_coding;locus_tag=LDO45_RS20015;old_locus_tag=BDI4_400036 NZ_CAJZAS010000195.1 Protein Homology CDS 34182 34505 . + 0 ID=cds-WP_006753067.1;Parent=gene-LDO45_RS20015;Dbxref=GenBank:WP_006753067.1;Name=WP_006753067.1;Ontology_term=GO:0009055,GO:0051539;gbkey=CDS;gene=fdxA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013697054.1;locus_tag=LDO45_RS20015;product=ferredoxin FdxA;protein_id=WP_006753067.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 34609 34684 . + . ID=gene-LDO45_RS20020;Name=LDO45_RS20020;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS20020;old_locus_tag=BDI4_TRNA14 NZ_CAJZAS010000195.1 tRNAscan-SE tRNA 34609 34684 . + . ID=rna-LDO45_RS20020;Parent=gene-LDO45_RS20020;anticodon=(pos:34642..34644);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS20020;product=tRNA-Asn NZ_CAJZAS010000195.1 tRNAscan-SE exon 34609 34684 . + . ID=exon-LDO45_RS20020-1;Parent=rna-LDO45_RS20020;anticodon=(pos:34642..34644);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS20020;product=tRNA-Asn NZ_CAJZAS010000195.1 RefSeq gene 34760 34835 . + . ID=gene-LDO45_RS20025;Name=LDO45_RS20025;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS20025;old_locus_tag=BDI4_TRNA15 NZ_CAJZAS010000195.1 tRNAscan-SE tRNA 34760 34835 . + . ID=rna-LDO45_RS20025;Parent=gene-LDO45_RS20025;anticodon=(pos:34793..34795);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS20025;product=tRNA-Asn NZ_CAJZAS010000195.1 tRNAscan-SE exon 34760 34835 . + . ID=exon-LDO45_RS20025-1;Parent=rna-LDO45_RS20025;anticodon=(pos:34793..34795);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS20025;product=tRNA-Asn NZ_CAJZAS010000195.1 RefSeq gene 34943 35428 . + . ID=gene-LDO45_RS20030;Name=LDO45_RS20030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20030;old_locus_tag=BDI4_400037 NZ_CAJZAS010000195.1 Protein Homology CDS 34943 35428 . + 0 ID=cds-WP_059523767.1;Parent=gene-LDO45_RS20030;Dbxref=GenBank:WP_059523767.1;Name=WP_059523767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656324.1;locus_tag=LDO45_RS20030;product=CreA family protein;protein_id=WP_059523767.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 35490 36395 . + . ID=gene-LDO45_RS20035;Name=LDO45_RS20035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20035;old_locus_tag=BDI4_400038 NZ_CAJZAS010000195.1 Protein Homology CDS 35490 36395 . + 0 ID=cds-WP_223963186.1;Parent=gene-LDO45_RS20035;Dbxref=GenBank:WP_223963186.1;Name=WP_223963186.1;Ontology_term=GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897680.1;locus_tag=LDO45_RS20035;product=AraC family transcriptional regulator;protein_id=WP_223963186.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 36518 37291 . + . ID=gene-LDO45_RS20040;Name=LDO45_RS20040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20040;old_locus_tag=BDI4_400039 NZ_CAJZAS010000195.1 Protein Homology CDS 36518 37291 . + 0 ID=cds-WP_059691069.1;Parent=gene-LDO45_RS20040;Dbxref=GenBank:WP_059691069.1;Name=WP_059691069.1;Ontology_term=GO:0006865,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363383.1;locus_tag=LDO45_RS20040;product=AzlC family ABC transporter permease;protein_id=WP_059691069.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 37288 37626 . + . ID=gene-LDO45_RS20045;Name=LDO45_RS20045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20045;old_locus_tag=BDI4_400040 NZ_CAJZAS010000195.1 Protein Homology CDS 37288 37626 . + 0 ID=cds-WP_059523773.1;Parent=gene-LDO45_RS20045;Dbxref=GenBank:WP_059523773.1;Name=WP_059523773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897682.1;locus_tag=LDO45_RS20045;product=AzlD domain-containing protein;protein_id=WP_059523773.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 37786 38562 . + . ID=gene-LDO45_RS20050;Name=LDO45_RS20050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20050;old_locus_tag=BDI4_400041 NZ_CAJZAS010000195.1 Protein Homology CDS 37786 38562 . + 0 ID=cds-WP_059691068.1;Parent=gene-LDO45_RS20050;Dbxref=GenBank:WP_059691068.1;Name=WP_059691068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897683.1;locus_tag=LDO45_RS20050;product=DUF4088 family protein;protein_id=WP_059691068.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 38680 39090 . - . ID=gene-LDO45_RS20055;Name=LDO45_RS20055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20055;old_locus_tag=BDI4_400042 NZ_CAJZAS010000195.1 Protein Homology CDS 38680 39090 . - 0 ID=cds-WP_059523776.1;Parent=gene-LDO45_RS20055;Dbxref=GenBank:WP_059523776.1;Name=WP_059523776.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328136.1;locus_tag=LDO45_RS20055;product=hypothetical protein;protein_id=WP_059523776.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 39371 39589 . + . ID=gene-LDO45_RS20060;Name=LDO45_RS20060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20060;old_locus_tag=BDI4_400043 NZ_CAJZAS010000195.1 Protein Homology CDS 39371 39589 . + 0 ID=cds-WP_006753074.1;Parent=gene-LDO45_RS20060;Dbxref=GenBank:WP_006753074.1;Name=WP_006753074.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753074.1;locus_tag=LDO45_RS20060;product=RNA-binding S4 domain-containing protein;protein_id=WP_006753074.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 39719 41107 . + . ID=gene-LDO45_RS20065;Name=norM;gbkey=Gene;gene=norM;gene_biotype=protein_coding;locus_tag=LDO45_RS20065;old_locus_tag=BDI4_400044 NZ_CAJZAS010000195.1 Protein Homology CDS 39719 41107 . + 0 ID=cds-WP_223963188.1;Parent=gene-LDO45_RS20065;Dbxref=GenBank:WP_223963188.1;Name=WP_223963188.1;gbkey=CDS;gene=norM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883895.1;locus_tag=LDO45_RS20065;product=multidrug efflux MATE transporter NorM;protein_id=WP_223963188.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 41250 42644 . + . ID=gene-LDO45_RS20070;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=LDO45_RS20070;old_locus_tag=BDI4_400045 NZ_CAJZAS010000195.1 Protein Homology CDS 41250 42644 . + 0 ID=cds-WP_059691066.1;Parent=gene-LDO45_RS20070;Dbxref=GenBank:WP_059691066.1;Name=WP_059691066.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532308.1;locus_tag=LDO45_RS20070;product=class II fumarate hydratase;protein_id=WP_059691066.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 42703 43215 . - . ID=gene-LDO45_RS20075;Name=LDO45_RS20075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20075;old_locus_tag=BDI4_400046 NZ_CAJZAS010000195.1 Protein Homology CDS 42703 43215 . - 0 ID=cds-WP_014897688.1;Parent=gene-LDO45_RS20075;Dbxref=GenBank:WP_014897688.1;Name=WP_014897688.1;Ontology_term=GO:0047617;gbkey=CDS;go_function=fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400680.1;locus_tag=LDO45_RS20075;product=acyl-CoA thioesterase;protein_id=WP_014897688.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 43336 43467 . - . ID=gene-LDO45_RS34280;Name=LDO45_RS34280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34280 NZ_CAJZAS010000195.1 Protein Homology CDS 43336 43467 . - 0 ID=cds-WP_257130002.1;Parent=gene-LDO45_RS34280;Dbxref=GenBank:WP_257130002.1;Name=WP_257130002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753078.1;locus_tag=LDO45_RS34280;product=hypothetical protein;protein_id=WP_257130002.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 43645 44352 . + . ID=gene-LDO45_RS20080;Name=LDO45_RS20080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20080;old_locus_tag=BDI4_400048 NZ_CAJZAS010000195.1 Protein Homology CDS 43645 44352 . + 0 ID=cds-WP_223963200.1;Parent=gene-LDO45_RS20080;Dbxref=GenBank:WP_223963200.1;Name=WP_223963200.1;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757661.1;locus_tag=LDO45_RS20080;product=helix-turn-helix transcriptional regulator;protein_id=WP_223963200.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 44515 47067 . + . ID=gene-LDO45_RS20085;Name=LDO45_RS20085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20085;old_locus_tag=BDI4_400049 NZ_CAJZAS010000195.1 Protein Homology CDS 44515 47067 . + 0 ID=cds-WP_223963203.1;Parent=gene-LDO45_RS20085;Dbxref=GenBank:WP_223963203.1;Name=WP_223963203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656312.1;locus_tag=LDO45_RS20085;product=DUF6600 domain-containing protein;protein_id=WP_223963203.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 47172 48143 . - . ID=gene-LDO45_RS20090;Name=LDO45_RS20090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20090;old_locus_tag=BDI4_400050 NZ_CAJZAS010000195.1 Protein Homology CDS 47172 48143 . - 0 ID=cds-WP_059816398.1;Parent=gene-LDO45_RS20090;Dbxref=GenBank:WP_059816398.1;Name=WP_059816398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400684.1;locus_tag=LDO45_RS20090;product=thymidylate synthase;protein_id=WP_059816398.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 48186 49583 . - . ID=gene-LDO45_RS20095;Name=LDO45_RS20095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20095;old_locus_tag=BDI4_400052 NZ_CAJZAS010000195.1 Protein Homology CDS 48186 49583 . - 0 ID=cds-WP_059523787.1;Parent=gene-LDO45_RS20095;Dbxref=GenBank:WP_059523787.1;Name=WP_059523787.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486860.1;locus_tag=LDO45_RS20095;product=sigma-54 dependent transcriptional regulator;protein_id=WP_059523787.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 50057 50410 . + . ID=gene-LDO45_RS20100;Name=LDO45_RS20100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20100;old_locus_tag=BDI4_400054 NZ_CAJZAS010000195.1 Protein Homology CDS 50057 50410 . + 0 ID=cds-WP_223963206.1;Parent=gene-LDO45_RS20100;Dbxref=GenBank:WP_223963206.1;Name=WP_223963206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897694.1;locus_tag=LDO45_RS20100;product=hypothetical protein;protein_id=WP_223963206.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 50708 51208 . + . ID=gene-LDO45_RS20105;Name=LDO45_RS20105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20105;old_locus_tag=BDI4_400055 NZ_CAJZAS010000195.1 Protein Homology CDS 50708 51208 . + 0 ID=cds-WP_059523789.1;Parent=gene-LDO45_RS20105;Dbxref=GenBank:WP_059523789.1;Name=WP_059523789.1;Ontology_term=GO:0004146,GO:0050661;gbkey=CDS;go_function=dihydrofolate reductase activity|0004146||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897695.1;locus_tag=LDO45_RS20105;product=dihydrofolate reductase;protein_id=WP_059523789.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 51292 52662 . - . ID=gene-LDO45_RS20110;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=LDO45_RS20110;old_locus_tag=BDI4_400056 NZ_CAJZAS010000195.1 Protein Homology CDS 51292 52662 . - 0 ID=cds-WP_059523791.1;Parent=gene-LDO45_RS20110;Dbxref=GenBank:WP_059523791.1;Name=WP_059523791.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180925.1;locus_tag=LDO45_RS20110;product=metalloprotease PmbA;protein_id=WP_059523791.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 52791 53396 . + . ID=gene-LDO45_RS20115;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=LDO45_RS20115;old_locus_tag=BDI4_400057 NZ_CAJZAS010000195.1 Protein Homology CDS 52791 53396 . + 0 ID=cds-WP_290371025.1;Parent=gene-LDO45_RS20115;Dbxref=GenBank:WP_290371025.1;Name=WP_290371025.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363370.1;locus_tag=LDO45_RS20115;product=ribosome biogenesis factor YjgA;protein_id=WP_290371025.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 53380 53997 . + . ID=gene-LDO45_RS20120;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=LDO45_RS20120;old_locus_tag=BDI4_400058 NZ_CAJZAS010000195.1 Protein Homology CDS 53380 53997 . + 0 ID=cds-WP_081259227.1;Parent=gene-LDO45_RS20120;Dbxref=GenBank:WP_081259227.1;Name=WP_081259227.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414341.1;locus_tag=LDO45_RS20120;product=molybdopterin adenylyltransferase;protein_id=WP_081259227.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 54014 54634 . - . ID=gene-LDO45_RS20125;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=LDO45_RS20125;old_locus_tag=BDI4_400059 NZ_CAJZAS010000195.1 Protein Homology CDS 54014 54634 . - 0 ID=cds-WP_223963208.1;Parent=gene-LDO45_RS20125;Dbxref=GenBank:WP_223963208.1;Name=WP_223963208.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351365.1;locus_tag=LDO45_RS20125;product=oligoribonuclease;protein_id=WP_223963208.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 54727 55986 . + . ID=gene-LDO45_RS20130;Name=LDO45_RS20130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20130;old_locus_tag=BDI4_400060 NZ_CAJZAS010000195.1 Protein Homology CDS 54727 55986 . + 0 ID=cds-WP_059691062.1;Parent=gene-LDO45_RS20130;Dbxref=GenBank:WP_059691062.1;Name=WP_059691062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601592.1;locus_tag=LDO45_RS20130;product=M48 family metallopeptidase;protein_id=WP_059691062.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 55983 56924 . + . ID=gene-LDO45_RS20135;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=LDO45_RS20135;old_locus_tag=BDI4_400061 NZ_CAJZAS010000195.1 Protein Homology CDS 55983 56924 . + 0 ID=cds-WP_223963210.1;Parent=gene-LDO45_RS20135;Dbxref=GenBank:WP_223963210.1;Name=WP_223963210.1;Ontology_term=GO:0006412,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883868.1;locus_tag=LDO45_RS20135;product=ribosome small subunit-dependent GTPase A;protein_id=WP_223963210.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 56985 57302 . + . ID=gene-LDO45_RS20140;Name=LDO45_RS20140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20140;old_locus_tag=BDI4_400062 NZ_CAJZAS010000195.1 Protein Homology CDS 56985 57302 . + 0 ID=cds-WP_059523802.1;Parent=gene-LDO45_RS20140;Dbxref=GenBank:WP_059523802.1;Name=WP_059523802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656301.1;locus_tag=LDO45_RS20140;product=putative signal transducing protein;protein_id=WP_059523802.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 57381 58319 . - . ID=gene-LDO45_RS20145;Name=LDO45_RS20145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20145;old_locus_tag=BDI4_400063 NZ_CAJZAS010000195.1 Protein Homology CDS 57381 58319 . - 0 ID=cds-WP_059523804.1;Parent=gene-LDO45_RS20145;Dbxref=GenBank:WP_059523804.1;Name=WP_059523804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213825.1;locus_tag=LDO45_RS20145;product=CobD/CbiB family protein;protein_id=WP_059523804.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 58441 59127 . - . ID=gene-LDO45_RS20150;Name=LDO45_RS20150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20150;old_locus_tag=BDI4_400064 NZ_CAJZAS010000195.1 Protein Homology CDS 58441 59127 . - 0 ID=cds-WP_059523805.1;Parent=gene-LDO45_RS20150;Dbxref=GenBank:WP_059523805.1;Name=WP_059523805.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486824.1;locus_tag=LDO45_RS20150;product=CoA pyrophosphatase;protein_id=WP_059523805.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 59215 59607 . - . ID=gene-LDO45_RS20155;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=LDO45_RS20155;old_locus_tag=BDI4_400065 NZ_CAJZAS010000195.1 Protein Homology CDS 59215 59607 . - 0 ID=cds-WP_006753174.1;Parent=gene-LDO45_RS20155;Dbxref=GenBank:WP_006753174.1;Name=WP_006753174.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486838.1;locus_tag=LDO45_RS20155;product=50S ribosomal protein L19;protein_id=WP_006753174.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 59741 60535 . - . ID=gene-LDO45_RS20160;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=LDO45_RS20160;old_locus_tag=BDI4_400066 NZ_CAJZAS010000195.1 Protein Homology CDS 59741 60535 . - 0 ID=cds-WP_059447922.1;Parent=gene-LDO45_RS20160;Dbxref=GenBank:WP_059447922.1;Name=WP_059447922.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400700.1;locus_tag=LDO45_RS20160;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_059447922.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 60535 61212 . - . ID=gene-LDO45_RS20165;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=LDO45_RS20165;old_locus_tag=BDI4_400067 NZ_CAJZAS010000195.1 Protein Homology CDS 60535 61212 . - 0 ID=cds-WP_223963212.1;Parent=gene-LDO45_RS20165;Dbxref=GenBank:WP_223963212.1;Name=WP_223963212.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527496.1;locus_tag=LDO45_RS20165;product=ribosome maturation factor RimM;protein_id=WP_223963212.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 61255 61509 . - . ID=gene-LDO45_RS20170;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=LDO45_RS20170;old_locus_tag=BDI4_400069 NZ_CAJZAS010000195.1 Protein Homology CDS 61255 61509 . - 0 ID=cds-WP_006476550.1;Parent=gene-LDO45_RS20170;Dbxref=GenBank:WP_006476550.1;Name=WP_006476550.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008342343.1;locus_tag=LDO45_RS20170;product=30S ribosomal protein S16;protein_id=WP_006476550.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 61663 62802 . + . ID=gene-LDO45_RS20175;Name=LDO45_RS20175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20175;old_locus_tag=BDI4_400068 NZ_CAJZAS010000195.1 Protein Homology CDS 61663 62802 . + 0 ID=cds-WP_223963274.1;Parent=gene-LDO45_RS20175;Dbxref=GenBank:WP_223963274.1;Name=WP_223963274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006050277.1;locus_tag=LDO45_RS20175;product=sorbosone dehydrogenase family protein;protein_id=WP_223963274.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 62913 63380 . + . ID=gene-LDO45_RS20180;Name=LDO45_RS20180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20180;old_locus_tag=BDI4_400070 NZ_CAJZAS010000195.1 Protein Homology CDS 62913 63380 . + 0 ID=cds-WP_059523814.1;Parent=gene-LDO45_RS20180;Dbxref=GenBank:WP_059523814.1;Name=WP_059523814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600966.1;locus_tag=LDO45_RS20180;product=NINE protein;protein_id=WP_059523814.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 63403 64581 . - . ID=gene-LDO45_RS20185;Name=LDO45_RS20185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20185;old_locus_tag=BDI4_400071 NZ_CAJZAS010000195.1 Protein Homology CDS 63403 64581 . - 0 ID=cds-WP_223963214.1;Parent=gene-LDO45_RS20185;Dbxref=GenBank:WP_223963214.1;Name=WP_223963214.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363360.1;locus_tag=LDO45_RS20185;product=PA0069 family radical SAM protein;protein_id=WP_223963214.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 64673 65161 . - . ID=gene-LDO45_RS20190;Name=LDO45_RS20190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20190;old_locus_tag=BDI4_400072 NZ_CAJZAS010000195.1 Protein Homology CDS 64673 65161 . - 0 ID=cds-WP_006762687.1;Parent=gene-LDO45_RS20190;Dbxref=GenBank:WP_006762687.1;Name=WP_006762687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351353.1;locus_tag=LDO45_RS20190;product=Lrp/AsnC ligand binding domain-containing protein;protein_id=WP_006762687.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 65306 66592 . + . ID=gene-LDO45_RS20195;Name=LDO45_RS20195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20195;old_locus_tag=BDI4_400073 NZ_CAJZAS010000195.1 Protein Homology CDS 65306 66592 . + 0 ID=cds-WP_059523818.1;Parent=gene-LDO45_RS20195;Dbxref=GenBank:WP_059523818.1;Name=WP_059523818.1;Ontology_term=GO:0055130,GO:0008718,GO:0016491,GO:0071949;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=D-alanine catabolic process|0055130||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018433359.1;locus_tag=LDO45_RS20195;product=D-amino acid dehydrogenase;protein_id=WP_059523818.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 66779 67714 . - . ID=gene-LDO45_RS20200;Name=LDO45_RS20200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20200;old_locus_tag=BDI4_400074 NZ_CAJZAS010000195.1 Protein Homology CDS 66779 67714 . - 0 ID=cds-WP_223963218.1;Parent=gene-LDO45_RS20200;Dbxref=GenBank:WP_223963218.1;Name=WP_223963218.1;Ontology_term=GO:0009055,GO:0050660;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189890.1;locus_tag=LDO45_RS20200;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_223963218.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 67731 68480 . - . ID=gene-LDO45_RS20205;Name=LDO45_RS20205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20205;old_locus_tag=BDI4_400075 NZ_CAJZAS010000195.1 Protein Homology CDS 67731 68480 . - 0 ID=cds-WP_223963220.1;Parent=gene-LDO45_RS20205;Dbxref=GenBank:WP_223963220.1;Name=WP_223963220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189750.1;locus_tag=LDO45_RS20205;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_223963220.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 68710 69504 . - . ID=gene-LDO45_RS20210;Name=LDO45_RS20210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20210;old_locus_tag=BDI4_400076 NZ_CAJZAS010000195.1 Protein Homology CDS 68710 69504 . - 0 ID=cds-WP_059529974.1;Parent=gene-LDO45_RS20210;Dbxref=GenBank:WP_059529974.1;Name=WP_059529974.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544895.1;locus_tag=LDO45_RS20210;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_059529974.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 69533 70186 . - . ID=gene-LDO45_RS20215;Name=LDO45_RS20215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20215;old_locus_tag=BDI4_400077 NZ_CAJZAS010000195.1 Protein Homology CDS 69533 70186 . - 0 ID=cds-WP_059529977.1;Parent=gene-LDO45_RS20215;Dbxref=GenBank:WP_059529977.1;Name=WP_059529977.1;Ontology_term=GO:0048473,GO:0033232,GO:0042626;gbkey=CDS;go_function=ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016345956.1;locus_tag=LDO45_RS20215;product=methionine ABC transporter permease;protein_id=WP_059529977.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 70176 71210 . - . ID=gene-LDO45_RS20220;Name=LDO45_RS20220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20220;old_locus_tag=BDI4_400078 NZ_CAJZAS010000195.1 Protein Homology CDS 70176 71210 . - 0 ID=cds-WP_059509785.1;Parent=gene-LDO45_RS20220;Dbxref=GenBank:WP_059509785.1;Name=WP_059509785.1;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889868.1;locus_tag=LDO45_RS20220;product=methionine ABC transporter ATP-binding protein;protein_id=WP_059509785.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 71427 72350 . + . ID=gene-LDO45_RS20225;Name=LDO45_RS20225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20225;old_locus_tag=BDI4_400079 NZ_CAJZAS010000195.1 Protein Homology CDS 71427 72350 . + 0 ID=cds-WP_223963222.1;Parent=gene-LDO45_RS20225;Dbxref=GenBank:WP_223963222.1;Name=WP_223963222.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406236.1;locus_tag=LDO45_RS20225;product=alpha/beta hydrolase;protein_id=WP_223963222.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 72373 73296 . - . ID=gene-LDO45_RS20230;Name=LDO45_RS20230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20230;old_locus_tag=BDI4_400080 NZ_CAJZAS010000195.1 Protein Homology CDS 72373 73296 . - 0 ID=cds-WP_059529984.1;Parent=gene-LDO45_RS20230;Dbxref=GenBank:WP_059529984.1;Name=WP_059529984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889864.1;locus_tag=LDO45_RS20230;product=histone deacetylase family protein;protein_id=WP_059529984.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 73340 74689 . + . ID=gene-LDO45_RS20235;Name=mltB;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=LDO45_RS20235;old_locus_tag=BDI4_400081 NZ_CAJZAS010000195.1 Protein Homology CDS 73340 74689 . + 0 ID=cds-WP_082721884.1;Parent=gene-LDO45_RS20235;Dbxref=GenBank:WP_082721884.1;Name=WP_082721884.1;Ontology_term=GO:0009253,GO:0016757;gbkey=CDS;gene=mltB;go_function=glycosyltransferase activity|0016757||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406238.1;locus_tag=LDO45_RS20235;product=lytic murein transglycosylase B;protein_id=WP_082721884.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 74767 75669 . - . ID=gene-LDO45_RS20240;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=LDO45_RS20240;old_locus_tag=BDI4_400082 NZ_CAJZAS010000195.1 Protein Homology CDS 74767 75669 . - 0 ID=cds-WP_059529990.1;Parent=gene-LDO45_RS20240;Dbxref=GenBank:WP_059529990.1;Name=WP_059529990.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476564.1;locus_tag=LDO45_RS20240;product=cysteine synthase CysM;protein_id=WP_059529990.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 75876 76220 . - . ID=gene-LDO45_RS20245;Name=LDO45_RS20245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20245;old_locus_tag=BDI4_400083 NZ_CAJZAS010000195.1 Protein Homology CDS 75876 76220 . - 0 ID=cds-WP_059529993.1;Parent=gene-LDO45_RS20245;Dbxref=GenBank:WP_059529993.1;Name=WP_059529993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750746.1;locus_tag=LDO45_RS20245;product=helix-hairpin-helix domain-containing protein;protein_id=WP_059529993.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 76294 77286 . - . ID=gene-LDO45_RS20250;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=LDO45_RS20250;old_locus_tag=BDI4_400084 NZ_CAJZAS010000195.1 Protein Homology CDS 76294 77286 . - 0 ID=cds-WP_223963223.1;Parent=gene-LDO45_RS20250;Dbxref=GenBank:WP_223963223.1;Name=WP_223963223.1;Ontology_term=GO:0005975,GO:0009244,GO:0008712,GO:0050661;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA,NADP binding|0050661||IEA;go_process=carbohydrate metabolic process|0005975||IEA,lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904403.1;locus_tag=LDO45_RS20250;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_223963223.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 77342 78292 . - . ID=gene-LDO45_RS20255;Name=rfaE1;gbkey=Gene;gene=rfaE1;gene_biotype=protein_coding;locus_tag=LDO45_RS20255;old_locus_tag=BDI4_400085 NZ_CAJZAS010000195.1 Protein Homology CDS 77342 78292 . - 0 ID=cds-WP_107938158.1;Parent=gene-LDO45_RS20255;Dbxref=GenBank:WP_107938158.1;Name=WP_107938158.1;Ontology_term=GO:0005975,GO:0016773,GO:0016779;gbkey=CDS;gene=rfaE1;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363349.1;locus_tag=LDO45_RS20255;product=D-glycero-beta-D-manno-heptose-7-phosphate kinase;protein_id=WP_107938158.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 78300 79700 . - . ID=gene-LDO45_RS20260;Name=LDO45_RS20260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20260;old_locus_tag=BDI4_400086 NZ_CAJZAS010000195.1 Protein Homology CDS 78300 79700 . - 0 ID=cds-WP_223963225.1;Parent=gene-LDO45_RS20260;Dbxref=GenBank:WP_223963225.1;Name=WP_223963225.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010105519.1;locus_tag=LDO45_RS20260;product=UDP-glucose/GDP-mannose dehydrogenase family protein;protein_id=WP_223963225.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 79791 80963 . - . ID=gene-LDO45_RS20265;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=LDO45_RS20265;old_locus_tag=BDI4_400088 NZ_CAJZAS010000195.1 Protein Homology CDS 79791 80963 . - 0 ID=cds-WP_059690827.1;Parent=gene-LDO45_RS20265;Dbxref=GenBank:WP_059690827.1;Name=WP_059690827.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897725.1;locus_tag=LDO45_RS20265;product=lipopolysaccharide assembly protein LapB;protein_id=WP_059690827.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 81017 81310 . - . ID=gene-LDO45_RS20270;Name=LDO45_RS20270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20270;old_locus_tag=BDI4_400089 NZ_CAJZAS010000195.1 Protein Homology CDS 81017 81310 . - 0 ID=cds-WP_059530004.1;Parent=gene-LDO45_RS20270;Dbxref=GenBank:WP_059530004.1;Name=WP_059530004.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195986.1;locus_tag=LDO45_RS20270;product=lipopolysaccharide assembly protein LapA domain-containing protein;protein_id=WP_059530004.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 81521 81844 . - . ID=gene-LDO45_RS20275;Name=LDO45_RS20275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20275;old_locus_tag=BDI4_400090 NZ_CAJZAS010000195.1 Protein Homology CDS 81521 81844 . - 0 ID=cds-WP_006750752.1;Parent=gene-LDO45_RS20275;Dbxref=GenBank:WP_006750752.1;Name=WP_006750752.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486894.1;locus_tag=LDO45_RS20275;product=integration host factor subunit beta;protein_id=WP_006750752.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 81867 83579 . - . ID=gene-LDO45_RS20280;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=LDO45_RS20280;old_locus_tag=BDI4_400091 NZ_CAJZAS010000195.1 Protein Homology CDS 81867 83579 . - 0 ID=cds-WP_059467119.1;Parent=gene-LDO45_RS20280;Dbxref=GenBank:WP_059467119.1;Name=WP_059467119.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025716.1;locus_tag=LDO45_RS20280;product=30S ribosomal protein S1;protein_id=WP_059467119.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 83721 84407 . - . ID=gene-LDO45_RS20285;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=LDO45_RS20285;old_locus_tag=BDI4_400092 NZ_CAJZAS010000195.1 Protein Homology CDS 83721 84407 . - 0 ID=cds-WP_059690826.1;Parent=gene-LDO45_RS20285;Dbxref=GenBank:WP_059690826.1;Name=WP_059690826.1;Ontology_term=GO:0015949,GO:0004127,GO:0005524;gbkey=CDS;gene=cmk;go_function=(d)CMP kinase activity|0004127||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189396.1;locus_tag=LDO45_RS20285;product=(d)CMP kinase;protein_id=WP_059690826.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 84421 85725 . - . ID=gene-LDO45_RS20290;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=LDO45_RS20290;old_locus_tag=BDI4_400093 NZ_CAJZAS010000195.1 Protein Homology CDS 84421 85725 . - 0 ID=cds-WP_059530011.1;Parent=gene-LDO45_RS20290;Dbxref=GenBank:WP_059530011.1;Name=WP_059530011.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009921655.1;locus_tag=LDO45_RS20290;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_059530011.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 85746 86672 . - . ID=gene-LDO45_RS20295;Name=LDO45_RS20295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20295;old_locus_tag=BDI4_400094 NZ_CAJZAS010000195.1 Protein Homology CDS 85746 86672 . - 0 ID=cds-WP_223963227.1;Parent=gene-LDO45_RS20295;Dbxref=GenBank:WP_223963227.1;Name=WP_223963227.1;Ontology_term=GO:0006571,GO:0008977,GO:0033730,GO:0070403;gbkey=CDS;go_function=prephenate dehydrogenase (NAD+) activity|0008977||IEA,arogenate dehydrogenase (NADP+) activity|0033730||IEA,NAD+ binding|0070403||IEA;go_process=tyrosine biosynthetic process|0006571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486923.1;locus_tag=LDO45_RS20295;product=prephenate dehydrogenase/arogenate dehydrogenase family protein;protein_id=WP_223963227.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 86860 87942 . - . ID=gene-LDO45_RS20300;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=LDO45_RS20300;old_locus_tag=BDI4_400095 NZ_CAJZAS010000195.1 Protein Homology CDS 86860 87942 . - 0 ID=cds-WP_223963228.1;Parent=gene-LDO45_RS20300;Dbxref=GenBank:WP_223963228.1;Name=WP_223963228.1;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;gene=pheA;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328120.1;locus_tag=LDO45_RS20300;product=prephenate dehydratase;protein_id=WP_223963228.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 87976 89058 . - . ID=gene-LDO45_RS20305;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=LDO45_RS20305;old_locus_tag=BDI4_400096 NZ_CAJZAS010000195.1 Protein Homology CDS 87976 89058 . - 0 ID=cds-WP_059530019.1;Parent=gene-LDO45_RS20305;Dbxref=GenBank:WP_059530019.1;Name=WP_059530019.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476577.1;locus_tag=LDO45_RS20305;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_059530019.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 89220 89819 . - . ID=gene-LDO45_RS20310;Name=LDO45_RS20310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20310;old_locus_tag=BDI4_400097 NZ_CAJZAS010000195.1 Protein Homology CDS 89220 89819 . - 0 ID=cds-WP_059448245.1;Parent=gene-LDO45_RS20310;Dbxref=GenBank:WP_059448245.1;Name=WP_059448245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009916801.1;locus_tag=LDO45_RS20310;product=DUF2059 domain-containing protein;protein_id=WP_059448245.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 89903 92506 . - . ID=gene-LDO45_RS20315;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=LDO45_RS20315;old_locus_tag=BDI4_400098 NZ_CAJZAS010000195.1 Protein Homology CDS 89903 92506 . - 0 ID=cds-WP_059530022.1;Parent=gene-LDO45_RS20315;Dbxref=GenBank:WP_059530022.1;Name=WP_059530022.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764872.1;locus_tag=LDO45_RS20315;product=DNA gyrase subunit A;protein_id=WP_059530022.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 93043 93711 . + . ID=gene-LDO45_RS20320;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=LDO45_RS20320;old_locus_tag=BDI4_400100 NZ_CAJZAS010000195.1 Protein Homology CDS 93043 93711 . + 0 ID=cds-WP_006400736.1;Parent=gene-LDO45_RS20320;Dbxref=GenBank:WP_006400736.1;Name=WP_006400736.1;Ontology_term=GO:0006811,GO:0015288;gbkey=CDS;gene=ompA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189892.1;locus_tag=LDO45_RS20320;product=outer membrane protein OmpA;protein_id=WP_006400736.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 93865 94563 . + . ID=gene-LDO45_RS20325;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=LDO45_RS20325;old_locus_tag=BDI4_400101 NZ_CAJZAS010000195.1 Protein Homology CDS 93865 94563 . + 0 ID=cds-WP_059530025.1;Parent=gene-LDO45_RS20325;Dbxref=GenBank:WP_059530025.1;Name=WP_059530025.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol-n 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486844.1;locus_tag=LDO45_RS20325;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_059530025.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 94577 95293 . + . ID=gene-LDO45_RS20330;Name=gph;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=LDO45_RS20330;old_locus_tag=BDI4_400102 NZ_CAJZAS010000195.1 Protein Homology CDS 94577 95293 . + 0 ID=cds-WP_223963229.1;Parent=gene-LDO45_RS20330;Dbxref=GenBank:WP_223963229.1;Name=WP_223963229.1;Note=PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (PF00702).;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;gene=gph;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351325.1;locus_tag=LDO45_RS20330;product=phosphoglycolate phosphatase;protein_id=WP_223963229.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 95311 95680 . + . ID=gene-LDO45_RS20335;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=LDO45_RS20335 NZ_CAJZAS010000195.1 cmsearch tmRNA 95311 95680 . + . ID=rna-LDO45_RS20335;Parent=gene-LDO45_RS20335;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO45_RS20335;product=transfer-messenger RNA NZ_CAJZAS010000195.1 cmsearch exon 95311 95680 . + . ID=exon-LDO45_RS20335-1;Parent=rna-LDO45_RS20335;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO45_RS20335;product=transfer-messenger RNA NZ_CAJZAS010000195.1 RefSeq gene 95942 96295 . - . ID=gene-LDO45_RS20340;Name=LDO45_RS20340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20340;old_locus_tag=BDI4_400103 NZ_CAJZAS010000195.1 Protein Homology CDS 95942 96295 . - 0 ID=cds-WP_059699488.1;Parent=gene-LDO45_RS20340;Dbxref=GenBank:WP_059699488.1;Name=WP_059699488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897737.1;locus_tag=LDO45_RS20340;product=DUF4148 domain-containing protein;protein_id=WP_059699488.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 96612 96884 . - . ID=gene-LDO45_RS20345;Name=LDO45_RS20345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20345;old_locus_tag=BDI4_400104 NZ_CAJZAS010000195.1 Protein Homology CDS 96612 96884 . - 0 ID=cds-WP_059816215.1;Parent=gene-LDO45_RS20345;Dbxref=GenBank:WP_059816215.1;Name=WP_059816215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544877.1;locus_tag=LDO45_RS20345;product=hypothetical protein;protein_id=WP_059816215.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 96986 98092 . - . ID=gene-LDO45_RS20350;Name=LDO45_RS20350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20350;old_locus_tag=BDI4_400105 NZ_CAJZAS010000195.1 Protein Homology CDS 96986 98092 . - 0 ID=cds-WP_223963230.1;Parent=gene-LDO45_RS20350;Dbxref=GenBank:WP_223963230.1;Name=WP_223963230.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656257.1;locus_tag=LDO45_RS20350;product=substrate-binding domain-containing protein;protein_id=WP_223963230.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 98224 98724 . + . ID=gene-LDO45_RS20355;Name=LDO45_RS20355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20355;old_locus_tag=BDI4_400106 NZ_CAJZAS010000195.1 Protein Homology CDS 98224 98724 . + 0 ID=cds-WP_223963233.1;Parent=gene-LDO45_RS20355;Dbxref=GenBank:WP_223963233.1;Name=WP_223963233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904393.1;locus_tag=LDO45_RS20355;product=NAD(P)H-dependent oxidoreductase subunit E;protein_id=WP_223963233.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 98721 100298 . + . ID=gene-LDO45_RS20360;Name=LDO45_RS20360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20360;old_locus_tag=BDI4_400107 NZ_CAJZAS010000195.1 Protein Homology CDS 98721 100298 . + 0 ID=cds-WP_223963235.1;Parent=gene-LDO45_RS20360;Dbxref=GenBank:WP_223963235.1;Name=WP_223963235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544874.1;locus_tag=LDO45_RS20360;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_223963235.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 100316 103267 . + . ID=gene-LDO45_RS20365;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=LDO45_RS20365;old_locus_tag=BDI4_400108 NZ_CAJZAS010000195.1 Protein Homology CDS 100316 103267 . + 0 ID=cds-WP_223963237.1;Parent=gene-LDO45_RS20365;Dbxref=GenBank:WP_223963237.1;Name=WP_223963237.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363333.1;locus_tag=LDO45_RS20365;product=formate dehydrogenase subunit alpha;protein_id=WP_223963237.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 103275 103526 . + . ID=gene-LDO45_RS20370;Name=LDO45_RS20370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20370;old_locus_tag=BDI4_400109 NZ_CAJZAS010000195.1 Protein Homology CDS 103275 103526 . + 0 ID=cds-WP_223963240.1;Parent=gene-LDO45_RS20370;Dbxref=GenBank:WP_223963240.1;Name=WP_223963240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413213.1;locus_tag=LDO45_RS20370;product=formate dehydrogenase subunit delta;protein_id=WP_223963240.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 103535 105199 . - . ID=gene-LDO45_RS20375;Name=LDO45_RS20375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20375;old_locus_tag=BDI4_400110 NZ_CAJZAS010000195.1 Protein Homology CDS 103535 105199 . - 0 ID=cds-WP_223963242.1;Parent=gene-LDO45_RS20375;Dbxref=GenBank:WP_223963242.1;Name=WP_223963242.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328117.1;locus_tag=LDO45_RS20375;product=FAD-dependent monooxygenase;protein_id=WP_223963242.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 105258 107168 . + . ID=gene-LDO45_RS20380;Name=LDO45_RS20380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20380;old_locus_tag=BDI4_400111 NZ_CAJZAS010000195.1 Protein Homology CDS 105258 107168 . + 0 ID=cds-WP_059530052.1;Parent=gene-LDO45_RS20380;Dbxref=GenBank:WP_059530052.1;Name=WP_059530052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656252.1;locus_tag=LDO45_RS20380;product=tetratricopeptide repeat protein;protein_id=WP_059530052.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 107245 108540 . - . ID=gene-LDO45_RS20385;Name=LDO45_RS20385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20385;old_locus_tag=BDI4_400112 NZ_CAJZAS010000195.1 Protein Homology CDS 107245 108540 . - 0 ID=cds-WP_223963244.1;Parent=gene-LDO45_RS20385;Dbxref=GenBank:WP_223963244.1;Name=WP_223963244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883785.1;locus_tag=LDO45_RS20385;product=MFS transporter;protein_id=WP_223963244.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 108683 109891 . + . ID=gene-LDO45_RS20390;Name=LDO45_RS20390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20390;old_locus_tag=BDI4_400113 NZ_CAJZAS010000195.1 Protein Homology CDS 108683 109891 . + 0 ID=cds-WP_223963247.1;Parent=gene-LDO45_RS20390;Dbxref=GenBank:WP_223963247.1;Name=WP_223963247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656250.1;locus_tag=LDO45_RS20390;product=hypothetical protein;protein_id=WP_223963247.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 109968 110660 . - . ID=gene-LDO45_RS20395;Name=LDO45_RS20395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20395;old_locus_tag=BDI4_400114 NZ_CAJZAS010000195.1 Protein Homology CDS 109968 110660 . - 0 ID=cds-WP_223963249.1;Parent=gene-LDO45_RS20395;Dbxref=GenBank:WP_223963249.1;Name=WP_223963249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485520.1;locus_tag=LDO45_RS20395;product=DUF2968 domain-containing protein;protein_id=WP_223963249.1;transl_table=11 NZ_CAJZAS010000195.1 RefSeq gene 110775 111052 . - . ID=gene-LDO45_RS20400;Name=LDO45_RS20400;end_range=111052,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20400;old_locus_tag=BDI4_400115;partial=true NZ_CAJZAS010000195.1 Protein Homology CDS 110775 111052 . - 2 ID=cds-WP_223963252.1;Parent=gene-LDO45_RS20400;Dbxref=GenBank:WP_223963252.1;Name=WP_223963252.1;Note=Members of this family of hydrolases with an active site Cys residue belong to MEROPS family C26.;Ontology_term=GO:0016787;end_range=111052,.;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544866.1;locus_tag=LDO45_RS20400;partial=true;product=gamma-glutamyl-gamma-aminobutyrate hydrolase family protein;protein_id=WP_223963252.1;transl_table=11 ##sequence-region NZ_CAJZAS010000196.1 1 81781 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000196.1 RefSeq region 1 81781 . + . ID=NZ_CAJZAS010000196.1:1..81781;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_41 NZ_CAJZAS010000196.1 cmsearch riboswitch 223 323 . - . ID=id-NZ_CAJZAS010000196.1:223..323;Dbxref=RFAM:RF01750;Note=ZMP/ZTP riboswitches appear to regulate genes involved in one-carbon metabolism;bound_moiety=5-aminoimidazole-4-carboxamide ribonucleotide (ZMP)/ 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranosyl 5'-triphosphate (ZMT);gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAS010000196.1 RefSeq gene 504 1250 . + . ID=gene-LDO45_RS20405;Name=LDO45_RS20405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20405;old_locus_tag=BDI4_410002 NZ_CAJZAS010000196.1 Protein Homology CDS 504 1250 . + 0 ID=cds-WP_223963278.1;Parent=gene-LDO45_RS20405;Dbxref=GenBank:WP_223963278.1;Name=WP_223963278.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696778.1;locus_tag=LDO45_RS20405;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_223963278.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 1348 1833 . + . ID=gene-LDO45_RS20410;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=LDO45_RS20410;old_locus_tag=BDI4_410003 NZ_CAJZAS010000196.1 Protein Homology CDS 1348 1833 . + 0 ID=cds-WP_223963280.1;Parent=gene-LDO45_RS20410;Dbxref=GenBank:WP_223963280.1;Name=WP_223963280.1;Ontology_term=GO:0047617,GO:0005737;gbkey=CDS;gene=ybgC;go_component=cytoplasm|0005737||IEA;go_function=fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656070.1;locus_tag=LDO45_RS20410;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_223963280.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 1978 2655 . + . ID=gene-LDO45_RS20415;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=LDO45_RS20415;old_locus_tag=BDI4_410004 NZ_CAJZAS010000196.1 Protein Homology CDS 1978 2655 . + 0 ID=cds-WP_010091489.1;Parent=gene-LDO45_RS20415;Dbxref=GenBank:WP_010091489.1;Name=WP_010091489.1;Ontology_term=GO:0043213,GO:0016020;gbkey=CDS;gene=tolQ;go_component=membrane|0016020||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010091489.1;locus_tag=LDO45_RS20415;product=protein TolQ;protein_id=WP_010091489.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 2666 3115 . + . ID=gene-LDO45_RS20420;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=LDO45_RS20420;old_locus_tag=BDI4_410005 NZ_CAJZAS010000196.1 Protein Homology CDS 2666 3115 . + 0 ID=cds-WP_059535490.1;Parent=gene-LDO45_RS20420;Dbxref=GenBank:WP_059535490.1;Name=WP_059535490.1;Ontology_term=GO:0061024,GO:1902600,GO:0015078,GO:0098567;gbkey=CDS;gene=tolR;go_component=periplasmic side of plasma membrane|0098567||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=membrane organization|0061024||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194863.1;locus_tag=LDO45_RS20420;product=protein TolR;protein_id=WP_059535490.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 3112 4179 . + . ID=gene-LDO45_RS20425;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=LDO45_RS20425;old_locus_tag=BDI4_410006 NZ_CAJZAS010000196.1 Protein Homology CDS 3112 4179 . + 0 ID=cds-WP_223963282.1;Parent=gene-LDO45_RS20425;Dbxref=GenBank:WP_223963282.1;Name=WP_223963282.1;Ontology_term=GO:0006810,GO:0005215,GO:0098567;gbkey=CDS;gene=tolA;go_component=periplasmic side of plasma membrane|0098567||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327979.1;locus_tag=LDO45_RS20425;product=cell envelope integrity protein TolA;protein_id=WP_223963282.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 4289 5584 . + . ID=gene-LDO45_RS20430;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=LDO45_RS20430;old_locus_tag=BDI4_410008 NZ_CAJZAS010000196.1 Protein Homology CDS 4289 5584 . + 0 ID=cds-WP_059690845.1;Parent=gene-LDO45_RS20430;Dbxref=GenBank:WP_059690845.1;Name=WP_059690845.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351073.1;locus_tag=LDO45_RS20430;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_059690845.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 5602 6111 . + . ID=gene-LDO45_RS20435;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=LDO45_RS20435;old_locus_tag=BDI4_410009 NZ_CAJZAS010000196.1 Protein Homology CDS 5602 6111 . + 0 ID=cds-WP_059535484.1;Parent=gene-LDO45_RS20435;Dbxref=GenBank:WP_059535484.1;Name=WP_059535484.1;Ontology_term=GO:0009279;gbkey=CDS;gene=pal;go_component=cell outer membrane|0009279||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186227.1;locus_tag=LDO45_RS20435;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_059535484.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 6131 6880 . + . ID=gene-LDO45_RS20440;Name=ybgF;gbkey=Gene;gene=ybgF;gene_biotype=protein_coding;locus_tag=LDO45_RS20440;old_locus_tag=BDI4_410010 NZ_CAJZAS010000196.1 Protein Homology CDS 6131 6880 . + 0 ID=cds-WP_059535482.1;Parent=gene-LDO45_RS20440;Dbxref=GenBank:WP_059535482.1;Name=WP_059535482.1;Ontology_term=GO:0005515;gbkey=CDS;gene=ybgF;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025426.1;locus_tag=LDO45_RS20440;product=tol-pal system protein YbgF;protein_id=WP_059535482.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 6939 7014 . + . ID=gene-LDO45_RS20445;Name=LDO45_RS20445;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS20445;old_locus_tag=BDI4_TRNA16 NZ_CAJZAS010000196.1 tRNAscan-SE tRNA 6939 7014 . + . ID=rna-LDO45_RS20445;Parent=gene-LDO45_RS20445;anticodon=(pos:6972..6974);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS20445;product=tRNA-Lys NZ_CAJZAS010000196.1 tRNAscan-SE exon 6939 7014 . + . ID=exon-LDO45_RS20445-1;Parent=rna-LDO45_RS20445;anticodon=(pos:6972..6974);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS20445;product=tRNA-Lys NZ_CAJZAS010000196.1 RefSeq gene 7169 8116 . - . ID=gene-LDO45_RS20450;Name=LDO45_RS20450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20450;old_locus_tag=BDI4_410011 NZ_CAJZAS010000196.1 Protein Homology CDS 7169 8116 . - 0 ID=cds-WP_223963285.1;Parent=gene-LDO45_RS20450;Dbxref=GenBank:WP_223963285.1;Name=WP_223963285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476801.1;locus_tag=LDO45_RS20450;product=AraC family transcriptional regulator;protein_id=WP_223963285.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 8247 8576 . + . ID=gene-LDO45_RS20455;Name=LDO45_RS20455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20455;old_locus_tag=BDI4_410012 NZ_CAJZAS010000196.1 Protein Homology CDS 8247 8576 . + 0 ID=cds-WP_059474721.1;Parent=gene-LDO45_RS20455;Dbxref=GenBank:WP_059474721.1;Name=WP_059474721.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883382.1;locus_tag=LDO45_RS20455;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_059474721.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 8737 9570 . + . ID=gene-LDO45_RS20460;Name=LDO45_RS20460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20460;old_locus_tag=BDI4_410013 NZ_CAJZAS010000196.1 Protein Homology CDS 8737 9570 . + 0 ID=cds-WP_059689014.1;Parent=gene-LDO45_RS20460;Dbxref=GenBank:WP_059689014.1;Name=WP_059689014.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883381.1;locus_tag=LDO45_RS20460;product=class II glutamine amidotransferase;protein_id=WP_059689014.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 10163 11224 . + . ID=gene-LDO45_RS20465;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=LDO45_RS20465;old_locus_tag=BDI4_410015 NZ_CAJZAS010000196.1 Protein Homology CDS 10163 11224 . + 0 ID=cds-WP_223963288.1;Parent=gene-LDO45_RS20465;Dbxref=GenBank:WP_223963288.1;Name=WP_223963288.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406347.1;locus_tag=LDO45_RS20465;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_223963288.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 11236 12129 . + . ID=gene-LDO45_RS20470;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=LDO45_RS20470;old_locus_tag=BDI4_410016 NZ_CAJZAS010000196.1 Protein Homology CDS 11236 12129 . + 0 ID=cds-WP_059820506.1;Parent=gene-LDO45_RS20470;Dbxref=GenBank:WP_059820506.1;Name=WP_059820506.1;Ontology_term=GO:0019305,GO:0045226,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA,extracellular polysaccharide biosynthetic process|0045226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328029.1;locus_tag=LDO45_RS20470;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_059820506.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 12114 12665 . + . ID=gene-LDO45_RS20475;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=LDO45_RS20475;old_locus_tag=BDI4_410017 NZ_CAJZAS010000196.1 Protein Homology CDS 12114 12665 . + 0 ID=cds-WP_059689017.1;Parent=gene-LDO45_RS20475;Dbxref=GenBank:WP_059689017.1;Name=WP_059689017.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406345.1;locus_tag=LDO45_RS20475;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=WP_059689017.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 12674 13594 . + . ID=gene-LDO45_RS20480;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=LDO45_RS20480;old_locus_tag=BDI4_410018 NZ_CAJZAS010000196.1 Protein Homology CDS 12674 13594 . + 0 ID=cds-WP_223963290.1;Parent=gene-LDO45_RS20480;Dbxref=GenBank:WP_223963290.1;Name=WP_223963290.1;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406344.1;locus_tag=LDO45_RS20480;product=dTDP-4-dehydrorhamnose reductase;protein_id=WP_223963290.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 13604 14281 . - . ID=gene-LDO45_RS20485;Name=LDO45_RS20485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20485;old_locus_tag=BDI4_410019 NZ_CAJZAS010000196.1 Protein Homology CDS 13604 14281 . - 0 ID=cds-WP_374109542.1;Parent=gene-LDO45_RS20485;Dbxref=GenBank:WP_374109542.1;Name=WP_374109542.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544667.1;locus_tag=LDO45_RS20485;product=GNAT family N-acetyltransferase;protein_id=WP_374109542.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 14281 15609 . - . ID=gene-LDO45_RS20490;Name=LDO45_RS20490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20490;old_locus_tag=BDI4_410020 NZ_CAJZAS010000196.1 Protein Homology CDS 14281 15609 . - 0 ID=cds-WP_223963294.1;Parent=gene-LDO45_RS20490;Dbxref=GenBank:WP_223963294.1;Name=WP_223963294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351059.1;locus_tag=LDO45_RS20490;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=WP_223963294.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 15655 16569 . - . ID=gene-LDO45_RS20495;Name=LDO45_RS20495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20495;old_locus_tag=BDI4_410021 NZ_CAJZAS010000196.1 Protein Homology CDS 15655 16569 . - 0 ID=cds-WP_223963355.1;Parent=gene-LDO45_RS20495;Dbxref=GenBank:WP_223963355.1;Name=WP_223963355.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010116897.1;locus_tag=LDO45_RS20495;product=UDP-3-O-acyl N-acetylglycosamine deacetylase;protein_id=WP_223963355.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 16566 24191 . - . ID=gene-LDO45_RS20500;Name=LDO45_RS20500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20500;old_locus_tag=BDI4_410022 NZ_CAJZAS010000196.1 Protein Homology CDS 16566 24191 . - 0 ID=cds-WP_223963312.1;Parent=gene-LDO45_RS20500;Dbxref=GenBank:WP_223963312.1;Name=WP_223963312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484972.1;locus_tag=LDO45_RS20500;product=type I polyketide synthase;protein_id=WP_223963312.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 24194 25726 . - . ID=gene-LDO45_RS20505;Name=LDO45_RS20505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20505;old_locus_tag=BDI4_410023 NZ_CAJZAS010000196.1 Protein Homology CDS 24194 25726 . - 0 ID=cds-WP_223963313.1;Parent=gene-LDO45_RS20505;Dbxref=GenBank:WP_223963313.1;Name=WP_223963313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497467.1;locus_tag=LDO45_RS20505;product=LTA synthase family protein;protein_id=WP_223963313.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 25728 26549 . - . ID=gene-LDO45_RS20510;Name=LDO45_RS20510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20510;old_locus_tag=BDI4_410025 NZ_CAJZAS010000196.1 Protein Homology CDS 25728 26549 . - 0 ID=cds-WP_373557210.1;Parent=gene-LDO45_RS20510;Dbxref=GenBank:WP_373557210.1;Name=WP_373557210.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007735181.1;locus_tag=LDO45_RS20510;product=SDR family oxidoreductase;protein_id=WP_373557210.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 27626 29101 . - . ID=gene-LDO45_RS20515;Name=LDO45_RS20515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20515;old_locus_tag=BDI4_410028 NZ_CAJZAS010000196.1 Protein Homology CDS 27626 29101 . - 0 ID=cds-WP_059689130.1;Parent=gene-LDO45_RS20515;Dbxref=GenBank:WP_059689130.1;Name=WP_059689130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006462898.1;locus_tag=LDO45_RS20515;product=glycosyltransferase;protein_id=WP_059689130.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 29117 30202 . - . ID=gene-LDO45_RS20520;Name=LDO45_RS20520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20520;old_locus_tag=BDI4_410029 NZ_CAJZAS010000196.1 Protein Homology CDS 29117 30202 . - 0 ID=cds-WP_223963315.1;Parent=gene-LDO45_RS20520;Dbxref=GenBank:WP_223963315.1;Name=WP_223963315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006462897.1;locus_tag=LDO45_RS20520;product=glycosyltransferase;protein_id=WP_223963315.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 30183 31523 . - . ID=gene-LDO45_RS20525;Name=LDO45_RS20525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20525;old_locus_tag=BDI4_410030 NZ_CAJZAS010000196.1 Protein Homology CDS 30183 31523 . - 0 ID=cds-WP_223963316.1;Parent=gene-LDO45_RS20525;Dbxref=GenBank:WP_223963316.1;Name=WP_223963316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006462896.1;locus_tag=LDO45_RS20525;product=glycosyltransferase family 4 protein;protein_id=WP_223963316.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 31520 32470 . - . ID=gene-LDO45_RS20530;Name=LDO45_RS20530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20530;old_locus_tag=BDI4_410031 NZ_CAJZAS010000196.1 Protein Homology CDS 31520 32470 . - 0 ID=cds-WP_223963319.1;Parent=gene-LDO45_RS20530;Dbxref=GenBank:WP_223963319.1;Name=WP_223963319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003805109.1;locus_tag=LDO45_RS20530;product=polysaccharide deacetylase;protein_id=WP_223963319.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 32497 33003 . - . ID=gene-LDO45_RS20535;Name=LDO45_RS20535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20535;old_locus_tag=BDI4_410032 NZ_CAJZAS010000196.1 GeneMarkS-2+ CDS 32497 33003 . - 0 ID=cds-WP_223963320.1;Parent=gene-LDO45_RS20535;Dbxref=GenBank:WP_223963320.1;Name=WP_223963320.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS20535;product=hypothetical protein;protein_id=WP_223963320.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 33045 34157 . - . ID=gene-LDO45_RS20540;Name=LDO45_RS20540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20540;old_locus_tag=BDI4_410033 NZ_CAJZAS010000196.1 Protein Homology CDS 33045 34157 . - 0 ID=cds-WP_223963323.1;Parent=gene-LDO45_RS20540;Dbxref=GenBank:WP_223963323.1;Name=WP_223963323.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016027.5;locus_tag=LDO45_RS20540;product=glycosyltransferase;protein_id=WP_223963323.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 34154 35323 . - . ID=gene-LDO45_RS20545;Name=LDO45_RS20545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20545;old_locus_tag=BDI4_410034 NZ_CAJZAS010000196.1 Protein Homology CDS 34154 35323 . - 0 ID=cds-WP_059689028.1;Parent=gene-LDO45_RS20545;Dbxref=GenBank:WP_059689028.1;Name=WP_059689028.1;Ontology_term=GO:0000271,GO:0016616,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019426057.1;locus_tag=LDO45_RS20545;product=nucleotide sugar dehydrogenase;protein_id=WP_059689028.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 35481 36869 . - . ID=gene-LDO45_RS20550;Name=LDO45_RS20550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20550;old_locus_tag=BDI4_410035 NZ_CAJZAS010000196.1 Protein Homology CDS 35481 36869 . - 0 ID=cds-WP_223963324.1;Parent=gene-LDO45_RS20550;Dbxref=GenBank:WP_223963324.1;Name=WP_223963324.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027224.5;locus_tag=LDO45_RS20550;product=BNR repeat-containing protein;protein_id=WP_223963324.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 36975 42380 . - . ID=gene-LDO45_RS20555;Name=LDO45_RS20555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20555;old_locus_tag=BDI4_410036 NZ_CAJZAS010000196.1 Protein Homology CDS 36975 42380 . - 0 ID=cds-WP_223963326.1;Parent=gene-LDO45_RS20555;Dbxref=GenBank:WP_223963326.1;Name=WP_223963326.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025665.5;locus_tag=LDO45_RS20555;product=glycoside hydrolase family 99-like domain-containing protein;protein_id=WP_223963326.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 42398 44245 . - . ID=gene-LDO45_RS20560;Name=LDO45_RS20560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20560;old_locus_tag=BDI4_410037 NZ_CAJZAS010000196.1 Protein Homology CDS 42398 44245 . - 0 ID=cds-WP_223963327.1;Parent=gene-LDO45_RS20560;Dbxref=GenBank:WP_223963327.1;Name=WP_223963327.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027224.5;locus_tag=LDO45_RS20560;product=BNR repeat-containing protein;protein_id=WP_223963327.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 44242 46491 . - . ID=gene-LDO45_RS20565;Name=LDO45_RS20565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20565;old_locus_tag=BDI4_410038 NZ_CAJZAS010000196.1 GeneMarkS-2+ CDS 44242 46491 . - 0 ID=cds-WP_223963329.1;Parent=gene-LDO45_RS20565;Dbxref=GenBank:WP_223963329.1;Name=WP_223963329.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS20565;product=hypothetical protein;protein_id=WP_223963329.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 46488 47756 . - . ID=gene-LDO45_RS20570;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=LDO45_RS20570;old_locus_tag=BDI4_410039 NZ_CAJZAS010000196.1 Protein Homology CDS 46488 47756 . - 0 ID=cds-WP_059689034.1;Parent=gene-LDO45_RS20570;Dbxref=GenBank:WP_059689034.1;Name=WP_059689034.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750680.1;locus_tag=LDO45_RS20570;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_059689034.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 47753 48871 . - . ID=gene-LDO45_RS20575;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=LDO45_RS20575;old_locus_tag=BDI4_410040 NZ_CAJZAS010000196.1 Protein Homology CDS 47753 48871 . - 0 ID=cds-WP_223963330.1;Parent=gene-LDO45_RS20575;Dbxref=GenBank:WP_223963330.1;Name=WP_223963330.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005793186.1;locus_tag=LDO45_RS20575;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_223963330.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 48886 50058 . - . ID=gene-LDO45_RS20580;Name=LDO45_RS20580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20580;old_locus_tag=BDI4_410041 NZ_CAJZAS010000196.1 Protein Homology CDS 48886 50058 . - 0 ID=cds-WP_223963331.1;Parent=gene-LDO45_RS20580;Dbxref=GenBank:WP_223963331.1;Name=WP_223963331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006462893.1;locus_tag=LDO45_RS20580;product=chain-length determining protein;protein_id=WP_223963331.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 50055 50717 . - . ID=gene-LDO45_RS20585;Name=LDO45_RS20585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20585;old_locus_tag=BDI4_410042 NZ_CAJZAS010000196.1 Protein Homology CDS 50055 50717 . - 0 ID=cds-WP_059689036.1;Parent=gene-LDO45_RS20585;Dbxref=GenBank:WP_059689036.1;Name=WP_059689036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020654750.1;locus_tag=LDO45_RS20585;product=ABC transporter ATP-binding protein;protein_id=WP_059689036.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 50714 51529 . - . ID=gene-LDO45_RS20590;Name=LDO45_RS20590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20590;old_locus_tag=BDI4_410043 NZ_CAJZAS010000196.1 Protein Homology CDS 50714 51529 . - 0 ID=cds-WP_223963333.1;Parent=gene-LDO45_RS20590;Dbxref=GenBank:WP_223963333.1;Name=WP_223963333.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003805128.1;locus_tag=LDO45_RS20590;product=ABC transporter permease;protein_id=WP_223963333.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 51536 52702 . - . ID=gene-LDO45_RS20595;Name=LDO45_RS20595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20595;old_locus_tag=BDI4_410044 NZ_CAJZAS010000196.1 Protein Homology CDS 51536 52702 . - 0 ID=cds-WP_059689038.1;Parent=gene-LDO45_RS20595;Dbxref=GenBank:WP_059689038.1;Name=WP_059689038.1;Ontology_term=GO:0015774,GO:0015159,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=polysaccharide transmembrane transporter activity|0015159||IEA;go_process=polysaccharide transport|0015774||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012435383.1;locus_tag=LDO45_RS20595;product=polysaccharide biosynthesis/export family protein;protein_id=WP_059689038.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 53418 54230 . + . ID=gene-LDO45_RS20600;Name=LDO45_RS20600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20600;old_locus_tag=BDI4_410046 NZ_CAJZAS010000196.1 Protein Homology CDS 53418 54230 . + 0 ID=cds-WP_059535436.1;Parent=gene-LDO45_RS20600;Dbxref=GenBank:WP_059535436.1;Name=WP_059535436.1;Ontology_term=GO:0008381;gbkey=CDS;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750674.1;locus_tag=LDO45_RS20600;product=mechanosensitive ion channel family protein;protein_id=WP_059535436.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 54397 55080 . - . ID=gene-LDO45_RS20605;Name=LDO45_RS20605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20605;old_locus_tag=BDI4_410047 NZ_CAJZAS010000196.1 Protein Homology CDS 54397 55080 . - 0 ID=cds-WP_223963334.1;Parent=gene-LDO45_RS20605;Dbxref=GenBank:WP_223963334.1;Name=WP_223963334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333275.1;locus_tag=LDO45_RS20605;product=DedA family protein;protein_id=WP_223963334.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 55252 57243 . + . ID=gene-LDO45_RS20610;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=LDO45_RS20610;old_locus_tag=BDI4_410048 NZ_CAJZAS010000196.1 Protein Homology CDS 55252 57243 . + 0 ID=cds-WP_223963336.1;Parent=gene-LDO45_RS20610;Dbxref=GenBank:WP_223963336.1;Name=WP_223963336.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656051.1;locus_tag=LDO45_RS20610;product=DNA mismatch repair endonuclease MutL;protein_id=WP_223963336.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 57240 58217 . + . ID=gene-LDO45_RS20615;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=LDO45_RS20615;old_locus_tag=BDI4_410049 NZ_CAJZAS010000196.1 Protein Homology CDS 57240 58217 . + 0 ID=cds-WP_223963338.1;Parent=gene-LDO45_RS20615;Dbxref=GenBank:WP_223963338.1;Name=WP_223963338.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897997.1;locus_tag=LDO45_RS20615;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_223963338.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 58344 59195 . - . ID=gene-LDO45_RS20620;Name=LDO45_RS20620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20620;old_locus_tag=BDI4_410050 NZ_CAJZAS010000196.1 Protein Homology CDS 58344 59195 . - 0 ID=cds-WP_059535432.1;Parent=gene-LDO45_RS20620;Dbxref=GenBank:WP_059535432.1;Name=WP_059535432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655628.1;locus_tag=LDO45_RS20620;product=LysR substrate-binding domain-containing protein;protein_id=WP_059535432.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 59309 59971 . + . ID=gene-LDO45_RS20625;Name=LDO45_RS20625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20625;old_locus_tag=BDI4_410052 NZ_CAJZAS010000196.1 Protein Homology CDS 59309 59971 . + 0 ID=cds-WP_223963341.1;Parent=gene-LDO45_RS20625;Dbxref=GenBank:WP_223963341.1;Name=WP_223963341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756458.1;locus_tag=LDO45_RS20625;product=FMN-dependent NADH-azoreductase;protein_id=WP_223963341.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 60162 61217 . - . ID=gene-LDO45_RS20630;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=LDO45_RS20630;old_locus_tag=BDI4_410053 NZ_CAJZAS010000196.1 Protein Homology CDS 60162 61217 . - 0 ID=cds-WP_059451336.1;Parent=gene-LDO45_RS20630;Dbxref=GenBank:WP_059451336.1;Name=WP_059451336.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010116949.1;locus_tag=LDO45_RS20630;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_059451336.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 61465 62199 . + . ID=gene-LDO45_RS20635;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=LDO45_RS20635;old_locus_tag=BDI4_410054 NZ_CAJZAS010000196.1 Protein Homology CDS 61465 62199 . + 0 ID=cds-WP_006760485.1;Parent=gene-LDO45_RS20635;Dbxref=GenBank:WP_006760485.1;Name=WP_006760485.1;Ontology_term=GO:0032297,GO:0016818;gbkey=CDS;gene=hda;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333268.1;locus_tag=LDO45_RS20635;product=DnaA regulatory inactivator Hda;protein_id=WP_006760485.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 62211 62888 . + . ID=gene-LDO45_RS20640;Name=LDO45_RS20640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20640;old_locus_tag=BDI4_410055 NZ_CAJZAS010000196.1 Protein Homology CDS 62211 62888 . + 0 ID=cds-WP_059535426.1;Parent=gene-LDO45_RS20640;Dbxref=GenBank:WP_059535426.1;Name=WP_059535426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401594.1;locus_tag=LDO45_RS20640;product=HAD family phosphatase;protein_id=WP_059535426.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 62894 64429 . + . ID=gene-LDO45_RS20645;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=LDO45_RS20645;old_locus_tag=BDI4_410056 NZ_CAJZAS010000196.1 Protein Homology CDS 62894 64429 . + 0 ID=cds-WP_223963343.1;Parent=gene-LDO45_RS20645;Dbxref=GenBank:WP_223963343.1;Name=WP_223963343.1;Ontology_term=GO:0043633,GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;go_process=polyadenylation-dependent RNA catabolic process|0043633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214075.1;locus_tag=LDO45_RS20645;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_223963343.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 64465 65007 . + . ID=gene-LDO45_RS20650;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=LDO45_RS20650;old_locus_tag=BDI4_410057 NZ_CAJZAS010000196.1 Protein Homology CDS 64465 65007 . + 0 ID=cds-WP_059535422.1;Parent=gene-LDO45_RS20650;Dbxref=GenBank:WP_059535422.1;Name=WP_059535422.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025371.1;locus_tag=LDO45_RS20650;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_059535422.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 65004 65690 . + . ID=gene-LDO45_RS20655;Name=LDO45_RS20655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20655;old_locus_tag=BDI4_410059 NZ_CAJZAS010000196.1 Protein Homology CDS 65004 65690 . + 0 ID=cds-WP_059465459.1;Parent=gene-LDO45_RS20655;Dbxref=GenBank:WP_059465459.1;Name=WP_059465459.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656042.1;locus_tag=LDO45_RS20655;product=deoxynucleoside kinase;protein_id=WP_059465459.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 65735 66550 . + . ID=gene-LDO45_RS20660;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=LDO45_RS20660;old_locus_tag=BDI4_410058 NZ_CAJZAS010000196.1 Protein Homology CDS 65735 66550 . + 0 ID=cds-WP_223963346.1;Parent=gene-LDO45_RS20660;Dbxref=GenBank:WP_223963346.1;Name=WP_223963346.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351027.1;locus_tag=LDO45_RS20660;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_223963346.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 66686 68599 . - . ID=gene-LDO45_RS20665;Name=LDO45_RS20665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20665;old_locus_tag=BDI4_410060 NZ_CAJZAS010000196.1 Protein Homology CDS 66686 68599 . - 0 ID=cds-WP_223963349.1;Parent=gene-LDO45_RS20665;Dbxref=GenBank:WP_223963349.1;Name=WP_223963349.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497492.1;locus_tag=LDO45_RS20665;product=chorismate-binding protein;protein_id=WP_223963349.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 68604 69740 . - . ID=gene-LDO45_RS20670;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=LDO45_RS20670;old_locus_tag=BDI4_410061 NZ_CAJZAS010000196.1 Protein Homology CDS 68604 69740 . - 0 ID=cds-WP_059535417.1;Parent=gene-LDO45_RS20670;Dbxref=GenBank:WP_059535417.1;Name=WP_059535417.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417099.1;locus_tag=LDO45_RS20670;product=molecular chaperone DnaJ;protein_id=WP_059535417.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 69994 71946 . - . ID=gene-LDO45_RS20675;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=LDO45_RS20675;old_locus_tag=BDI4_410062 NZ_CAJZAS010000196.1 Protein Homology CDS 69994 71946 . - 0 ID=cds-WP_059535415.1;Parent=gene-LDO45_RS20675;Dbxref=GenBank:WP_059535415.1;Name=WP_059535415.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012431797.1;locus_tag=LDO45_RS20675;product=molecular chaperone DnaK;protein_id=WP_059535415.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 72094 72534 . - . ID=gene-LDO45_RS20680;Name=LDO45_RS20680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20680;old_locus_tag=BDI4_410064 NZ_CAJZAS010000196.1 Protein Homology CDS 72094 72534 . - 0 ID=cds-WP_223963352.1;Parent=gene-LDO45_RS20680;Dbxref=GenBank:WP_223963352.1;Name=WP_223963352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544641.1;locus_tag=LDO45_RS20680;product=thioredoxin family protein;protein_id=WP_223963352.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 72545 73090 . - . ID=gene-LDO45_RS20685;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=LDO45_RS20685;old_locus_tag=BDI4_410065 NZ_CAJZAS010000196.1 Protein Homology CDS 72545 73090 . - 0 ID=cds-WP_059465453.1;Parent=gene-LDO45_RS20685;Dbxref=GenBank:WP_059465453.1;Name=WP_059465453.1;Ontology_term=GO:0006457,GO:0000774,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein-folding chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194243.1;locus_tag=LDO45_RS20685;product=nucleotide exchange factor GrpE;protein_id=WP_059465453.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 73442 73603 . + . ID=gene-LDO45_RS20690;Name=LDO45_RS20690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20690;old_locus_tag=BDI4_410066 NZ_CAJZAS010000196.1 Protein Homology CDS 73442 73603 . + 0 ID=cds-WP_006476841.1;Parent=gene-LDO45_RS20690;Dbxref=GenBank:WP_006476841.1;Name=WP_006476841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004194079.1;locus_tag=LDO45_RS20690;product=hypothetical protein;protein_id=WP_006476841.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 73575 73982 . - . ID=gene-LDO45_RS20695;Name=LDO45_RS20695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20695;old_locus_tag=BDI4_410067 NZ_CAJZAS010000196.1 Protein Homology CDS 73575 73982 . - 0 ID=cds-WP_059535412.1;Parent=gene-LDO45_RS20695;Dbxref=GenBank:WP_059535412.1;Name=WP_059535412.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532194.1;locus_tag=LDO45_RS20695;product=RNA-binding S4 domain-containing protein;protein_id=WP_059535412.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 73988 75052 . - . ID=gene-LDO45_RS20700;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=LDO45_RS20700;old_locus_tag=BDI4_410068 NZ_CAJZAS010000196.1 Protein Homology CDS 73988 75052 . - 0 ID=cds-WP_059535410.1;Parent=gene-LDO45_RS20700;Dbxref=GenBank:WP_059535410.1;Name=WP_059535410.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694160.1;locus_tag=LDO45_RS20700;product=ferrochelatase;protein_id=WP_059535410.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 75190 76212 . - . ID=gene-LDO45_RS20705;Name=hrcA;gbkey=Gene;gene=hrcA;gene_biotype=protein_coding;locus_tag=LDO45_RS20705;old_locus_tag=BDI4_410069 NZ_CAJZAS010000196.1 Protein Homology CDS 75190 76212 . - 0 ID=cds-WP_011544637.1;Parent=gene-LDO45_RS20705;Dbxref=GenBank:WP_011544637.1;Name=WP_011544637.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=hrcA;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752732.1;locus_tag=LDO45_RS20705;product=heat-inducible transcriptional repressor HrcA;protein_id=WP_011544637.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 76343 77245 . + . ID=gene-LDO45_RS20710;Name=LDO45_RS20710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20710;old_locus_tag=BDI4_410070 NZ_CAJZAS010000196.1 Protein Homology CDS 76343 77245 . + 0 ID=cds-WP_059535408.1;Parent=gene-LDO45_RS20710;Dbxref=GenBank:WP_059535408.1;Name=WP_059535408.1;Ontology_term=GO:0019674,GO:0003951;gbkey=CDS;go_function=NAD+ kinase activity|0003951||IEA;go_process=NAD metabolic process|0019674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883345.1;locus_tag=LDO45_RS20710;product=NAD kinase;protein_id=WP_059535408.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 77265 78914 . + . ID=gene-LDO45_RS20715;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=LDO45_RS20715;old_locus_tag=BDI4_410071 NZ_CAJZAS010000196.1 Protein Homology CDS 77265 78914 . + 0 ID=cds-WP_059535406.1;Parent=gene-LDO45_RS20715;Dbxref=GenBank:WP_059535406.1;Name=WP_059535406.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889240.1;locus_tag=LDO45_RS20715;product=DNA repair protein RecN;protein_id=WP_059535406.1;transl_table=11 NZ_CAJZAS010000196.1 RefSeq gene 79042 81781 . - . ID=gene-LDO45_RS20720;Name=glnE;end_range=81781,.;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=LDO45_RS20720;old_locus_tag=BDI4_410072;partial=true NZ_CAJZAS010000196.1 Protein Homology CDS 79042 81781 . - 1 ID=cds-WP_223963354.1;Parent=gene-LDO45_RS20720;Dbxref=GenBank:WP_223963354.1;Name=WP_223963354.1;Ontology_term=GO:0008882;end_range=81781,.;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497495.1;locus_tag=LDO45_RS20720;partial=true;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_223963354.1;transl_table=11 ##sequence-region NZ_CAJZAS010000197.1 1 33054 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000197.1 RefSeq region 1 33054 . + . ID=NZ_CAJZAS010000197.1:1..33054;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_42 NZ_CAJZAS010000197.1 RefSeq gene 55 1758 . - . ID=gene-LDO45_RS20725;Name=LDO45_RS20725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20725;old_locus_tag=BDI4_420001 NZ_CAJZAS010000197.1 Protein Homology CDS 55 1758 . - 0 ID=cds-WP_175907773.1;Parent=gene-LDO45_RS20725;Dbxref=GenBank:WP_175907773.1;Name=WP_175907773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600702.1;locus_tag=LDO45_RS20725;product=thiamine pyrophosphate-binding protein;protein_id=WP_175907773.1;transl_table=11 NZ_CAJZAS010000197.1 RefSeq gene 1897 3285 . - . ID=gene-LDO45_RS20730;Name=LDO45_RS20730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20730;old_locus_tag=BDI4_420002 NZ_CAJZAS010000197.1 Protein Homology CDS 1897 3285 . - 0 ID=cds-WP_059531123.1;Parent=gene-LDO45_RS20730;Dbxref=GenBank:WP_059531123.1;Name=WP_059531123.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015004074.1;locus_tag=LDO45_RS20730;product=L-serine ammonia-lyase;protein_id=WP_059531123.1;transl_table=11 NZ_CAJZAS010000197.1 RefSeq gene 3316 4452 . - . ID=gene-LDO45_RS20735;Name=LDO45_RS20735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20735;old_locus_tag=BDI4_420003 NZ_CAJZAS010000197.1 Protein Homology CDS 3316 4452 . - 0 ID=cds-WP_059531120.1;Parent=gene-LDO45_RS20735;Dbxref=GenBank:WP_059531120.1;Name=WP_059531120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004545290.1;locus_tag=LDO45_RS20735;product=alginate lyase family protein;protein_id=WP_059531120.1;transl_table=11 NZ_CAJZAS010000197.1 RefSeq gene 4604 7531 . - . ID=gene-LDO45_RS20740;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=LDO45_RS20740;old_locus_tag=BDI4_420004 NZ_CAJZAS010000197.1 Protein Homology CDS 4604 7531 . - 0 ID=cds-WP_059699625.1;Parent=gene-LDO45_RS20740;Dbxref=GenBank:WP_059699625.1;Name=WP_059699625.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754104.1;locus_tag=LDO45_RS20740;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_059699625.1;transl_table=11 NZ_CAJZAS010000197.1 RefSeq gene 7593 7973 . - . ID=gene-LDO45_RS20745;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=LDO45_RS20745;old_locus_tag=BDI4_420005 NZ_CAJZAS010000197.1 Protein Homology CDS 7593 7973 . - 0 ID=cds-WP_059452603.1;Parent=gene-LDO45_RS20745;Dbxref=GenBank:WP_059452603.1;Name=WP_059452603.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759700.1;locus_tag=LDO45_RS20745;product=glycine cleavage system protein GcvH;protein_id=WP_059452603.1;transl_table=11 NZ_CAJZAS010000197.1 RefSeq gene 8090 9208 . - . ID=gene-LDO45_RS20750;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=LDO45_RS20750;old_locus_tag=BDI4_420006 NZ_CAJZAS010000197.1 Protein Homology CDS 8090 9208 . - 0 ID=cds-WP_223963359.1;Parent=gene-LDO45_RS20750;Dbxref=GenBank:WP_223963359.1;Name=WP_223963359.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010093063.1;locus_tag=LDO45_RS20750;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_223963359.1;transl_table=11 NZ_CAJZAS010000197.1 cmsearch riboswitch 9293 9426 . - . ID=id-NZ_CAJZAS010000197.1:9293..9426;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAS010000197.1 cmsearch riboswitch 9458 9563 . - . ID=id-NZ_CAJZAS010000197.1:9458..9563;Dbxref=RFAM:RF00504;Note=glycine riboswitch;bound_moiety=glycine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAS010000197.1 RefSeq gene 9687 10055 . - . ID=gene-LDO45_RS20755;Name=LDO45_RS20755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20755;old_locus_tag=BDI4_420007 NZ_CAJZAS010000197.1 Protein Homology CDS 9687 10055 . - 0 ID=cds-WP_059531112.1;Parent=gene-LDO45_RS20755;Dbxref=GenBank:WP_059531112.1;Name=WP_059531112.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195883.1;locus_tag=LDO45_RS20755;product=hypothetical protein;protein_id=WP_059531112.1;transl_table=11 NZ_CAJZAS010000197.1 RefSeq gene 10265 11317 . - . ID=gene-LDO45_RS20760;Name=LDO45_RS20760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20760;old_locus_tag=BDI4_420008 NZ_CAJZAS010000197.1 Protein Homology CDS 10265 11317 . - 0 ID=cds-WP_059539829.1;Parent=gene-LDO45_RS20760;Dbxref=GenBank:WP_059539829.1;Name=WP_059539829.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401418.1;locus_tag=LDO45_RS20760;product=oxidoreductase;protein_id=WP_059539829.1;transl_table=11 NZ_CAJZAS010000197.1 RefSeq gene 11563 12270 . + . ID=gene-LDO45_RS20765;Name=LDO45_RS20765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20765;old_locus_tag=BDI4_420009 NZ_CAJZAS010000197.1 Protein Homology CDS 11563 12270 . + 0 ID=cds-WP_059699629.1;Parent=gene-LDO45_RS20765;Dbxref=GenBank:WP_059699629.1;Name=WP_059699629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882855.1;locus_tag=LDO45_RS20765;product=SGNH/GDSL hydrolase family protein;protein_id=WP_059699629.1;transl_table=11 NZ_CAJZAS010000197.1 RefSeq gene 12292 13086 . - . ID=gene-LDO45_RS20770;Name=LDO45_RS20770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20770;old_locus_tag=BDI4_420010 NZ_CAJZAS010000197.1 Protein Homology CDS 12292 13086 . - 0 ID=cds-WP_175907762.1;Parent=gene-LDO45_RS20770;Dbxref=GenBank:WP_175907762.1;Name=WP_175907762.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: protein motif:HMM:NF016908.5;locus_tag=LDO45_RS20770;product=FkbM family methyltransferase;protein_id=WP_175907762.1;transl_table=11 NZ_CAJZAS010000197.1 RefSeq gene 13172 14611 . - . ID=gene-LDO45_RS20775;Name=LDO45_RS20775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20775;old_locus_tag=BDI4_420011 NZ_CAJZAS010000197.1 Protein Homology CDS 13172 14611 . - 0 ID=cds-WP_223963362.1;Parent=gene-LDO45_RS20775;Dbxref=GenBank:WP_223963362.1;Name=WP_223963362.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.5;locus_tag=LDO45_RS20775;product=glycosyltransferase family 2 protein;protein_id=WP_223963362.1;transl_table=11 NZ_CAJZAS010000197.1 RefSeq gene 14992 17079 . + . ID=gene-LDO45_RS20780;Name=LDO45_RS20780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20780;old_locus_tag=BDI4_420012 NZ_CAJZAS010000197.1 Protein Homology CDS 14992 17079 . + 0 ID=cds-WP_059531101.1;Parent=gene-LDO45_RS20780;Dbxref=GenBank:WP_059531101.1;Name=WP_059531101.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751043.1;locus_tag=LDO45_RS20780;product=UvrD-helicase domain-containing protein;protein_id=WP_059531101.1;transl_table=11 NZ_CAJZAS010000197.1 RefSeq gene 17170 18069 . - . ID=gene-LDO45_RS20785;Name=LDO45_RS20785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20785;old_locus_tag=BDI4_420013 NZ_CAJZAS010000197.1 Protein Homology CDS 17170 18069 . - 0 ID=cds-WP_059531098.1;Parent=gene-LDO45_RS20785;Dbxref=GenBank:WP_059531098.1;Name=WP_059531098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408293.1;locus_tag=LDO45_RS20785;product=cytochrome c5 family protein;protein_id=WP_059531098.1;transl_table=11 NZ_CAJZAS010000197.1 RefSeq gene 18323 18398 . + . ID=gene-LDO45_RS20790;Name=LDO45_RS20790;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS20790;old_locus_tag=BDI4_TRNA17 NZ_CAJZAS010000197.1 tRNAscan-SE tRNA 18323 18398 . + . ID=rna-LDO45_RS20790;Parent=gene-LDO45_RS20790;anticodon=(pos:18356..18358);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS20790;product=tRNA-Arg NZ_CAJZAS010000197.1 tRNAscan-SE exon 18323 18398 . + . ID=exon-LDO45_RS20790-1;Parent=rna-LDO45_RS20790;anticodon=(pos:18356..18358);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS20790;product=tRNA-Arg NZ_CAJZAS010000197.1 RefSeq pseudogene 18583 18908 . + . ID=gene-LDO45_RS20795;Name=LDO45_RS20795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS20795;old_locus_tag=BDI4_420014;pseudo=true NZ_CAJZAS010000197.1 Protein Homology CDS 18583 18908 . + 0 ID=cds-LDO45_RS20795;Parent=gene-LDO45_RS20795;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003263305.1;locus_tag=LDO45_RS20795;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAS010000197.1 RefSeq gene 19464 20579 . + . ID=gene-LDO45_RS20800;Name=LDO45_RS20800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20800;old_locus_tag=BDI4_420015 NZ_CAJZAS010000197.1 Protein Homology CDS 19464 20579 . + 0 ID=cds-WP_223963369.1;Parent=gene-LDO45_RS20800;Dbxref=GenBank:WP_223963369.1;Name=WP_223963369.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF013884.5;locus_tag=LDO45_RS20800;product=acyltransferase;protein_id=WP_223963369.1;transl_table=11 NZ_CAJZAS010000197.1 RefSeq gene 21037 22890 . + . ID=gene-LDO45_RS20805;Name=LDO45_RS20805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20805;old_locus_tag=BDI4_420016 NZ_CAJZAS010000197.1 Protein Homology CDS 21037 22890 . + 0 ID=cds-WP_223963371.1;Parent=gene-LDO45_RS20805;Dbxref=GenBank:WP_223963371.1;Name=WP_223963371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017772179.1;locus_tag=LDO45_RS20805;product=glycosyltransferase family 41 protein;protein_id=WP_223963371.1;transl_table=11 NZ_CAJZAS010000197.1 RefSeq gene 22936 25446 . + . ID=gene-LDO45_RS20810;Name=LDO45_RS20810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20810;old_locus_tag=BDI4_420017 NZ_CAJZAS010000197.1 Protein Homology CDS 22936 25446 . + 0 ID=cds-WP_223963373.1;Parent=gene-LDO45_RS20810;Dbxref=GenBank:WP_223963373.1;Name=WP_223963373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334889.1;locus_tag=LDO45_RS20810;product=tetratricopeptide repeat protein;protein_id=WP_223963373.1;transl_table=11 NZ_CAJZAS010000197.1 RefSeq gene 25487 27976 . + . ID=gene-LDO45_RS20815;Name=LDO45_RS20815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20815;old_locus_tag=BDI4_420018 NZ_CAJZAS010000197.1 Protein Homology CDS 25487 27976 . + 0 ID=cds-WP_223963376.1;Parent=gene-LDO45_RS20815;Dbxref=GenBank:WP_223963376.1;Name=WP_223963376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334889.1;locus_tag=LDO45_RS20815;product=tetratricopeptide repeat protein;protein_id=WP_223963376.1;transl_table=11 NZ_CAJZAS010000197.1 RefSeq gene 28147 28446 . - . ID=gene-LDO45_RS20820;Name=LDO45_RS20820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20820;old_locus_tag=BDI4_420019 NZ_CAJZAS010000197.1 Protein Homology CDS 28147 28446 . - 0 ID=cds-WP_059533511.1;Parent=gene-LDO45_RS20820;Dbxref=GenBank:WP_059533511.1;Name=WP_059533511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334891.1;locus_tag=LDO45_RS20820;product=flagellar protein FliT;protein_id=WP_059533511.1;transl_table=11 NZ_CAJZAS010000197.1 RefSeq gene 28487 29920 . - . ID=gene-LDO45_RS20825;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=LDO45_RS20825;old_locus_tag=BDI4_420020 NZ_CAJZAS010000197.1 Protein Homology CDS 28487 29920 . - 0 ID=cds-WP_059691527.1;Parent=gene-LDO45_RS20825;Dbxref=GenBank:WP_059691527.1;Name=WP_059691527.1;Ontology_term=GO:0007155,GO:0009288;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007730990.1;locus_tag=LDO45_RS20825;product=flagellar filament capping protein FliD;protein_id=WP_059691527.1;transl_table=11 NZ_CAJZAS010000197.1 RefSeq gene 30105 30923 . - . ID=gene-LDO45_RS20830;Name=LDO45_RS20830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20830;old_locus_tag=BDI4_420021 NZ_CAJZAS010000197.1 Protein Homology CDS 30105 30923 . - 0 ID=cds-WP_059508662.1;Parent=gene-LDO45_RS20830;Dbxref=GenBank:WP_059508662.1;Name=WP_059508662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895546.1;locus_tag=LDO45_RS20830;product=flagellin domain-containing protein;protein_id=WP_059508662.1;transl_table=11 NZ_CAJZAS010000197.1 RefSeq gene 31471 31683 . + . ID=gene-LDO45_RS20835;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=LDO45_RS20835;old_locus_tag=BDI4_420022 NZ_CAJZAS010000197.1 Protein Homology CDS 31471 31683 . + 0 ID=cds-WP_006401410.1;Parent=gene-LDO45_RS20835;Dbxref=GenBank:WP_006401410.1;Name=WP_006401410.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198205.1;locus_tag=LDO45_RS20835;product=30S ribosomal protein S21;protein_id=WP_006401410.1;transl_table=11 NZ_CAJZAS010000197.1 RefSeq gene 32015 32620 . - . ID=gene-LDO45_RS20840;Name=LDO45_RS20840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20840;old_locus_tag=BDI4_420023 NZ_CAJZAS010000197.1 Protein Homology CDS 32015 32620 . - 0 ID=cds-WP_059533507.1;Parent=gene-LDO45_RS20840;Dbxref=GenBank:WP_059533507.1;Name=WP_059533507.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401407.1;locus_tag=LDO45_RS20840;product=DNA-3-methyladenine glycosylase I;protein_id=WP_059533507.1;transl_table=11 NZ_CAJZAS010000197.1 RefSeq pseudogene 32762 33054 . + . ID=gene-LDO45_RS20845;Name=LDO45_RS20845;end_range=33054,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS20845;partial=true;pseudo=true NZ_CAJZAS010000197.1 Protein Homology CDS 32762 33054 . + 0 ID=cds-LDO45_RS20845;Parent=gene-LDO45_RS20845;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=33054,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760457.1;locus_tag=LDO45_RS20845;partial=true;product=ATPase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000198.1 1 122220 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000198.1 RefSeq region 1 122220 . + . ID=NZ_CAJZAS010000198.1:1..122220;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_43 NZ_CAJZAS010000198.1 RefSeq gene 1 614 . + . ID=gene-LDO45_RS20850;Name=LDO45_RS20850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20850;old_locus_tag=BDI4_430001;partial=true;start_range=.,1 NZ_CAJZAS010000198.1 Protein Homology CDS 1 614 . + 2 ID=cds-WP_223963396.1;Parent=gene-LDO45_RS20850;Dbxref=GenBank:WP_223963396.1;Name=WP_223963396.1;Ontology_term=GO:0006812,GO:0055085,GO:1902600,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336622.1;locus_tag=LDO45_RS20850;partial=true;product=cation:proton antiporter;protein_id=WP_223963396.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 629 3442 . - . ID=gene-LDO45_RS20855;Name=ligD;gbkey=Gene;gene=ligD;gene_biotype=protein_coding;locus_tag=LDO45_RS20855;old_locus_tag=BDI4_430002 NZ_CAJZAS010000198.1 Protein Homology CDS 629 3442 . - 0 ID=cds-WP_223963398.1;Parent=gene-LDO45_RS20855;Dbxref=GenBank:WP_223963398.1;Name=WP_223963398.1;Ontology_term=GO:0006303;gbkey=CDS;gene=ligD;go_process=double-strand break repair via nonhomologous end joining|0006303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879881.1;locus_tag=LDO45_RS20855;product=DNA ligase D;protein_id=WP_223963398.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 3467 4492 . - . ID=gene-LDO45_RS20860;Name=LDO45_RS20860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20860;old_locus_tag=BDI4_430003 NZ_CAJZAS010000198.1 Protein Homology CDS 3467 4492 . - 0 ID=cds-WP_223963401.1;Parent=gene-LDO45_RS20860;Dbxref=GenBank:WP_223963401.1;Name=WP_223963401.1;Ontology_term=GO:0006303,GO:0045027;gbkey=CDS;go_function=DNA end binding|0045027||IEA;go_process=double-strand break repair via nonhomologous end joining|0006303||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336620.1;locus_tag=LDO45_RS20860;product=Ku protein;protein_id=WP_223963401.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 4766 5152 . - . ID=gene-LDO45_RS20865;Name=LDO45_RS20865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20865;old_locus_tag=BDI4_430004 NZ_CAJZAS010000198.1 Protein Homology CDS 4766 5152 . - 0 ID=cds-WP_223963404.1;Parent=gene-LDO45_RS20865;Dbxref=GenBank:WP_223963404.1;Name=WP_223963404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761661.1;locus_tag=LDO45_RS20865;product=DUF3022 domain-containing protein;protein_id=WP_223963404.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 5149 5310 . - . ID=gene-LDO45_RS20870;Name=LDO45_RS20870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20870;old_locus_tag=BDI4_430005 NZ_CAJZAS010000198.1 Protein Homology CDS 5149 5310 . - 0 ID=cds-WP_081052496.1;Parent=gene-LDO45_RS20870;Dbxref=GenBank:WP_081052496.1;Name=WP_081052496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010120894.1;locus_tag=LDO45_RS20870;product=DUF1328 domain-containing protein;protein_id=WP_081052496.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 5364 5552 . - . ID=gene-LDO45_RS20875;Name=LDO45_RS20875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20875;old_locus_tag=BDI4_430006 NZ_CAJZAS010000198.1 Protein Homology CDS 5364 5552 . - 0 ID=cds-WP_059536983.1;Parent=gene-LDO45_RS20875;Dbxref=GenBank:WP_059536983.1;Name=WP_059536983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009978806.1;locus_tag=LDO45_RS20875;product=DUF3008 family protein;protein_id=WP_059536983.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 5623 7056 . - . ID=gene-LDO45_RS20880;Name=LDO45_RS20880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20880;old_locus_tag=BDI4_430007 NZ_CAJZAS010000198.1 Protein Homology CDS 5623 7056 . - 0 ID=cds-WP_223963406.1;Parent=gene-LDO45_RS20880;Dbxref=GenBank:WP_223963406.1;Name=WP_223963406.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217887.1;locus_tag=LDO45_RS20880;product=RNA polymerase factor sigma-54;protein_id=WP_223963406.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 7295 7606 . - . ID=gene-LDO45_RS20885;Name=LDO45_RS20885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20885;old_locus_tag=BDI4_430008 NZ_CAJZAS010000198.1 Protein Homology CDS 7295 7606 . - 0 ID=cds-WP_059536989.1;Parent=gene-LDO45_RS20885;Dbxref=GenBank:WP_059536989.1;Name=WP_059536989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753985.1;locus_tag=LDO45_RS20885;product=hypothetical protein;protein_id=WP_059536989.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 7656 7967 . - . ID=gene-LDO45_RS20890;Name=LDO45_RS20890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20890;old_locus_tag=BDI4_430010 NZ_CAJZAS010000198.1 Protein Homology CDS 7656 7967 . - 0 ID=cds-WP_059536992.1;Parent=gene-LDO45_RS20890;Dbxref=GenBank:WP_059536992.1;Name=WP_059536992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498337.1;locus_tag=LDO45_RS20890;product=hypothetical protein;protein_id=WP_059536992.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 7964 8233 . - . ID=gene-LDO45_RS20895;Name=LDO45_RS20895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20895;old_locus_tag=BDI4_430011 NZ_CAJZAS010000198.1 Protein Homology CDS 7964 8233 . - 0 ID=cds-WP_082725428.1;Parent=gene-LDO45_RS20895;Dbxref=GenBank:WP_082725428.1;Name=WP_082725428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372662.1;locus_tag=LDO45_RS20895;product=hypothetical protein;protein_id=WP_082725428.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 8442 8744 . - . ID=gene-LDO45_RS20900;Name=LDO45_RS20900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20900;old_locus_tag=BDI4_430012 NZ_CAJZAS010000198.1 Protein Homology CDS 8442 8744 . - 0 ID=cds-WP_059537426.1;Parent=gene-LDO45_RS20900;Dbxref=GenBank:WP_059537426.1;Name=WP_059537426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753982.1;locus_tag=LDO45_RS20900;product=hypothetical protein;protein_id=WP_059537426.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 8894 9148 . + . ID=gene-LDO45_RS20905;Name=LDO45_RS20905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20905;old_locus_tag=BDI4_430013 NZ_CAJZAS010000198.1 Protein Homology CDS 8894 9148 . + 0 ID=cds-WP_059536998.1;Parent=gene-LDO45_RS20905;Dbxref=GenBank:WP_059536998.1;Name=WP_059536998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761504.1;locus_tag=LDO45_RS20905;product=hypothetical protein;protein_id=WP_059536998.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 9237 9668 . + . ID=gene-LDO45_RS20910;Name=LDO45_RS20910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20910;old_locus_tag=BDI4_430014 NZ_CAJZAS010000198.1 Protein Homology CDS 9237 9668 . + 0 ID=cds-WP_059537001.1;Parent=gene-LDO45_RS20910;Dbxref=GenBank:WP_059537001.1;Name=WP_059537001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523329.1;locus_tag=LDO45_RS20910;product=CBS domain-containing protein;protein_id=WP_059537001.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 9760 10242 . + . ID=gene-LDO45_RS20915;Name=LDO45_RS20915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20915;old_locus_tag=BDI4_430015 NZ_CAJZAS010000198.1 Protein Homology CDS 9760 10242 . + 0 ID=cds-WP_059537005.1;Parent=gene-LDO45_RS20915;Dbxref=GenBank:WP_059537005.1;Name=WP_059537005.1;Ontology_term=GO:0019684,GO:0042314;gbkey=CDS;go_function=bacteriochlorophyll binding|0042314||IEA;go_process=photosynthesis%2C light reaction|0019684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553962.1;locus_tag=LDO45_RS20915;product=PRC-barrel domain-containing protein;protein_id=WP_059537005.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 10525 11820 . + . ID=gene-LDO45_RS20920;Name=LDO45_RS20920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20920;old_locus_tag=BDI4_430016 NZ_CAJZAS010000198.1 Protein Homology CDS 10525 11820 . + 0 ID=cds-WP_059537009.1;Parent=gene-LDO45_RS20920;Dbxref=GenBank:WP_059537009.1;Name=WP_059537009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397982.1;locus_tag=LDO45_RS20920;product=MFS transporter;protein_id=WP_059537009.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 11872 12654 . + . ID=gene-LDO45_RS20925;Name=LDO45_RS20925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20925;old_locus_tag=BDI4_430017 NZ_CAJZAS010000198.1 Protein Homology CDS 11872 12654 . + 0 ID=cds-WP_059537012.1;Parent=gene-LDO45_RS20925;Dbxref=GenBank:WP_059537012.1;Name=WP_059537012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020068382.1;locus_tag=LDO45_RS20925;product=substrate-binding domain-containing protein;protein_id=WP_059537012.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 12679 14001 . - . ID=gene-LDO45_RS20930;Name=dctA;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=LDO45_RS20930;old_locus_tag=BDI4_430018 NZ_CAJZAS010000198.1 Protein Homology CDS 12679 14001 . - 0 ID=cds-WP_223963408.1;Parent=gene-LDO45_RS20930;Dbxref=GenBank:WP_223963408.1;Name=WP_223963408.1;Ontology_term=GO:0006835,GO:0015293,GO:0016020;gbkey=CDS;gene=dctA;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549823.1;locus_tag=LDO45_RS20930;product=C4-dicarboxylate transporter DctA;protein_id=WP_223963408.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 14045 14968 . - . ID=gene-LDO45_RS20935;Name=LDO45_RS20935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20935;old_locus_tag=BDI4_430020 NZ_CAJZAS010000198.1 Protein Homology CDS 14045 14968 . - 0 ID=cds-WP_223963410.1;Parent=gene-LDO45_RS20935;Dbxref=GenBank:WP_223963410.1;Name=WP_223963410.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753975.1;locus_tag=LDO45_RS20935;product=LysR family transcriptional regulator;protein_id=WP_223963410.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 15378 16025 . + . ID=gene-LDO45_RS20940;Name=LDO45_RS20940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20940;old_locus_tag=BDI4_430021 NZ_CAJZAS010000198.1 Protein Homology CDS 15378 16025 . + 0 ID=cds-WP_223963412.1;Parent=gene-LDO45_RS20940;Dbxref=GenBank:WP_223963412.1;Name=WP_223963412.1;Note=This protein belongs to the uracil DNA glycosylase superfamily%2C members of which act in excision repair of DNA. However%2C it belongs more specifically to UdgX branch%2C whose founding member was found to bind uracil in DNA (where it does not belong)%2C without cleaving it%2C appears to promote DNA repair by a pathway involving RecA%2C rather than base excision.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660533.1;locus_tag=LDO45_RS20940;product=UdgX family uracil-DNA binding protein;protein_id=WP_223963412.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 16022 17329 . + . ID=gene-LDO45_RS20945;Name=LDO45_RS20945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20945;old_locus_tag=BDI4_430019 NZ_CAJZAS010000198.1 Protein Homology CDS 16022 17329 . + 0 ID=cds-WP_223963414.1;Parent=gene-LDO45_RS20945;Dbxref=GenBank:WP_223963414.1;Name=WP_223963414.1;Ontology_term=GO:0030001,GO:0046872,GO:0046873;gbkey=CDS;go_function=metal ion binding|0046872||IEA,metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879863.1;locus_tag=LDO45_RS20945;product=NRAMP family divalent metal transporter;protein_id=WP_223963414.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 17458 18069 . - . ID=gene-LDO45_RS20950;Name=LDO45_RS20950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20950;old_locus_tag=BDI4_430022 NZ_CAJZAS010000198.1 Protein Homology CDS 17458 18069 . - 0 ID=cds-WP_059537032.1;Parent=gene-LDO45_RS20950;Dbxref=GenBank:WP_059537032.1;Name=WP_059537032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879861.1;locus_tag=LDO45_RS20950;product=hypothetical protein;protein_id=WP_059537032.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 18129 18740 . - . ID=gene-LDO45_RS20955;Name=LDO45_RS20955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20955;old_locus_tag=BDI4_430023 NZ_CAJZAS010000198.1 Protein Homology CDS 18129 18740 . - 0 ID=cds-WP_223963416.1;Parent=gene-LDO45_RS20955;Dbxref=GenBank:WP_223963416.1;Name=WP_223963416.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398919.1;locus_tag=LDO45_RS20955;product=DUF4142 domain-containing protein;protein_id=WP_223963416.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 18769 19626 . - . ID=gene-LDO45_RS20960;Name=LDO45_RS20960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20960;old_locus_tag=BDI4_430024 NZ_CAJZAS010000198.1 Protein Homology CDS 18769 19626 . - 0 ID=cds-WP_059700803.1;Parent=gene-LDO45_RS20960;Dbxref=GenBank:WP_059700803.1;Name=WP_059700803.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545572.1;locus_tag=LDO45_RS20960;product=SDR family oxidoreductase;protein_id=WP_059700803.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 19727 20293 . - . ID=gene-LDO45_RS20965;Name=LDO45_RS20965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20965;old_locus_tag=BDI4_430025 NZ_CAJZAS010000198.1 Protein Homology CDS 19727 20293 . - 0 ID=cds-WP_059511596.1;Parent=gene-LDO45_RS20965;Dbxref=GenBank:WP_059511596.1;Name=WP_059511596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398917.1;locus_tag=LDO45_RS20965;product=hypothetical protein;protein_id=WP_059511596.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 20361 20660 . - . ID=gene-LDO45_RS20970;Name=LDO45_RS20970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20970;old_locus_tag=BDI4_430026 NZ_CAJZAS010000198.1 Protein Homology CDS 20361 20660 . - 0 ID=cds-WP_059692887.1;Parent=gene-LDO45_RS20970;Dbxref=GenBank:WP_059692887.1;Name=WP_059692887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498358.1;locus_tag=LDO45_RS20970;product=DUF2795 domain-containing protein;protein_id=WP_059692887.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 20707 21735 . - . ID=gene-LDO45_RS20975;Name=LDO45_RS20975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20975;old_locus_tag=BDI4_430027 NZ_CAJZAS010000198.1 Protein Homology CDS 20707 21735 . - 0 ID=cds-WP_059692884.1;Parent=gene-LDO45_RS20975;Dbxref=GenBank:WP_059692884.1;Name=WP_059692884.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407427.1;locus_tag=LDO45_RS20975;product=SDR family oxidoreductase;protein_id=WP_059692884.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 21763 22173 . - . ID=gene-LDO45_RS20980;Name=LDO45_RS20980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20980;old_locus_tag=BDI4_430028 NZ_CAJZAS010000198.1 Protein Homology CDS 21763 22173 . - 0 ID=cds-WP_059693181.1;Parent=gene-LDO45_RS20980;Dbxref=GenBank:WP_059693181.1;Name=WP_059693181.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398914.1;locus_tag=LDO45_RS20980;product=BON domain-containing protein;protein_id=WP_059693181.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 22417 23733 . + . ID=gene-LDO45_RS20985;Name=LDO45_RS20985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20985;old_locus_tag=BDI4_430029 NZ_CAJZAS010000198.1 Protein Homology CDS 22417 23733 . + 0 ID=cds-WP_223963418.1;Parent=gene-LDO45_RS20985;Dbxref=GenBank:WP_223963418.1;Name=WP_223963418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761072.1;locus_tag=LDO45_RS20985;product=glycosyltransferase family 1 protein;protein_id=WP_223963418.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 23733 24776 . + . ID=gene-LDO45_RS20990;Name=LDO45_RS20990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20990;old_locus_tag=BDI4_430030 NZ_CAJZAS010000198.1 Protein Homology CDS 23733 24776 . + 0 ID=cds-WP_059537429.1;Parent=gene-LDO45_RS20990;Dbxref=GenBank:WP_059537429.1;Name=WP_059537429.1;Ontology_term=GO:0042732,GO:0048040,GO:0070403;gbkey=CDS;go_function=UDP-glucuronate decarboxylase activity|0048040||IEA,NAD+ binding|0070403||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498363.1;locus_tag=LDO45_RS20990;product=UDP-glucuronic acid decarboxylase family protein;protein_id=WP_059537429.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 24818 27124 . - . ID=gene-LDO45_RS20995;Name=LDO45_RS20995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS20995;old_locus_tag=BDI4_430031 NZ_CAJZAS010000198.1 Protein Homology CDS 24818 27124 . - 0 ID=cds-WP_223963420.1;Parent=gene-LDO45_RS20995;Dbxref=GenBank:WP_223963420.1;Name=WP_223963420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660544.1;locus_tag=LDO45_RS20995;product=ATP-binding protein;protein_id=WP_223963420.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 27228 27935 . + . ID=gene-LDO45_RS21000;Name=LDO45_RS21000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21000;old_locus_tag=BDI4_430033 NZ_CAJZAS010000198.1 Protein Homology CDS 27228 27935 . + 0 ID=cds-WP_223963422.1;Parent=gene-LDO45_RS21000;Dbxref=GenBank:WP_223963422.1;Name=WP_223963422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498365.1;locus_tag=LDO45_RS21000;product=PIG-L family deacetylase;protein_id=WP_223963422.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 27914 28837 . + . ID=gene-LDO45_RS21005;Name=LDO45_RS21005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21005;old_locus_tag=BDI4_430032 NZ_CAJZAS010000198.1 Protein Homology CDS 27914 28837 . + 0 ID=cds-WP_223963424.1;Parent=gene-LDO45_RS21005;Dbxref=GenBank:WP_223963424.1;Name=WP_223963424.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217877.1;locus_tag=LDO45_RS21005;product=glycosyltransferase family 2 protein;protein_id=WP_223963424.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 28855 30222 . - . ID=gene-LDO45_RS21010;Name=LDO45_RS21010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21010;old_locus_tag=BDI4_430034 NZ_CAJZAS010000198.1 Protein Homology CDS 28855 30222 . - 0 ID=cds-WP_059537437.1;Parent=gene-LDO45_RS21010;Dbxref=GenBank:WP_059537437.1;Name=WP_059537437.1;Ontology_term=GO:0006355,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660547.1;locus_tag=LDO45_RS21010;product=sigma-54 dependent transcriptional regulator;protein_id=WP_059537437.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 30452 30574 . - . ID=gene-LDO45_RS34285;Name=LDO45_RS34285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34285 NZ_CAJZAS010000198.1 GeneMarkS-2+ CDS 30452 30574 . - 0 ID=cds-WP_290371027.1;Parent=gene-LDO45_RS34285;Dbxref=GenBank:WP_290371027.1;Name=WP_290371027.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34285;product=hypothetical protein;protein_id=WP_290371027.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 30573 31646 . + . ID=gene-LDO45_RS21015;Name=LDO45_RS21015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21015;old_locus_tag=BDI4_430035 NZ_CAJZAS010000198.1 Protein Homology CDS 30573 31646 . + 0 ID=cds-WP_223963426.1;Parent=gene-LDO45_RS21015;Dbxref=GenBank:WP_223963426.1;Name=WP_223963426.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660548.1;locus_tag=LDO45_RS21015;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_223963426.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 31673 32623 . - . ID=gene-LDO45_RS21020;Name=LDO45_RS21020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21020;old_locus_tag=BDI4_430036 NZ_CAJZAS010000198.1 Protein Homology CDS 31673 32623 . - 0 ID=cds-WP_059537072.1;Parent=gene-LDO45_RS21020;Dbxref=GenBank:WP_059537072.1;Name=WP_059537072.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553965.1;locus_tag=LDO45_RS21020;product=glycosyltransferase;protein_id=WP_059537072.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 32613 33689 . - . ID=gene-LDO45_RS21025;Name=LDO45_RS21025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21025;old_locus_tag=BDI4_430037 NZ_CAJZAS010000198.1 Protein Homology CDS 32613 33689 . - 0 ID=cds-WP_223963428.1;Parent=gene-LDO45_RS21025;Dbxref=GenBank:WP_223963428.1;Name=WP_223963428.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372699.1;locus_tag=LDO45_RS21025;product=glycosyltransferase family 9 protein;protein_id=WP_223963428.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 33686 34687 . - . ID=gene-LDO45_RS21030;Name=LDO45_RS21030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21030;old_locus_tag=BDI4_430038 NZ_CAJZAS010000198.1 Protein Homology CDS 33686 34687 . - 0 ID=cds-WP_059537079.1;Parent=gene-LDO45_RS21030;Dbxref=GenBank:WP_059537079.1;Name=WP_059537079.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725666.1;locus_tag=LDO45_RS21030;product=glycosyltransferase family 2 protein;protein_id=WP_059537079.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 34684 36429 . - . ID=gene-LDO45_RS21035;Name=LDO45_RS21035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21035;old_locus_tag=BDI4_430039 NZ_CAJZAS010000198.1 Protein Homology CDS 34684 36429 . - 0 ID=cds-WP_223963430.1;Parent=gene-LDO45_RS21035;Dbxref=GenBank:WP_223963430.1;Name=WP_223963430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545587.1;locus_tag=LDO45_RS21035;product=carbamoyltransferase C-terminal domain-containing protein;protein_id=WP_223963430.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 36433 37635 . - . ID=gene-LDO45_RS21040;Name=LDO45_RS21040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21040;old_locus_tag=BDI4_430040 NZ_CAJZAS010000198.1 Protein Homology CDS 36433 37635 . - 0 ID=cds-WP_059693177.1;Parent=gene-LDO45_RS21040;Dbxref=GenBank:WP_059693177.1;Name=WP_059693177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407413.1;locus_tag=LDO45_RS21040;product=glycosyltransferase family 9 protein;protein_id=WP_059693177.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 37632 38243 . - . ID=gene-LDO45_RS21045;Name=LDO45_RS21045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21045;old_locus_tag=BDI4_430041 NZ_CAJZAS010000198.1 Protein Homology CDS 37632 38243 . - 0 ID=cds-WP_059537084.1;Parent=gene-LDO45_RS21045;Dbxref=GenBank:WP_059537084.1;Name=WP_059537084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755683.1;locus_tag=LDO45_RS21045;product=HAD-IIIA family hydrolase;protein_id=WP_059537084.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 38234 38986 . - . ID=gene-LDO45_RS21050;Name=LDO45_RS21050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21050;old_locus_tag=BDI4_430042 NZ_CAJZAS010000198.1 Protein Homology CDS 38234 38986 . - 0 ID=cds-WP_223963433.1;Parent=gene-LDO45_RS21050;Dbxref=GenBank:WP_223963433.1;Name=WP_223963433.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553968.1;locus_tag=LDO45_RS21050;product=SDR family oxidoreductase;protein_id=WP_223963433.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 39164 39691 . - . ID=gene-LDO45_RS21055;Name=LDO45_RS21055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21055;old_locus_tag=BDI4_430043 NZ_CAJZAS010000198.1 Protein Homology CDS 39164 39691 . - 0 ID=cds-WP_223963435.1;Parent=gene-LDO45_RS21055;Dbxref=GenBank:WP_223963435.1;Name=WP_223963435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755681.1;locus_tag=LDO45_RS21055;product=hypothetical protein;protein_id=WP_223963435.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 39810 40010 . - . ID=gene-LDO45_RS34605;Name=LDO45_RS34605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34605;old_locus_tag=BDI4_430044 NZ_CAJZAS010000198.1 GeneMarkS-2+ CDS 39810 40010 . - 0 ID=cds-WP_374109543.1;Parent=gene-LDO45_RS34605;Dbxref=GenBank:WP_374109543.1;Name=WP_374109543.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34605;product=hypothetical protein;protein_id=WP_374109543.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 40068 40913 . - . ID=gene-LDO45_RS21065;Name=LDO45_RS21065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21065;old_locus_tag=BDI4_430045 NZ_CAJZAS010000198.1 Protein Homology CDS 40068 40913 . - 0 ID=cds-WP_223963437.1;Parent=gene-LDO45_RS21065;Dbxref=GenBank:WP_223963437.1;Name=WP_223963437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755201.1;locus_tag=LDO45_RS21065;product=BON domain-containing protein;protein_id=WP_223963437.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 41196 41561 . - . ID=gene-LDO45_RS21070;Name=LDO45_RS21070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21070;old_locus_tag=BDI4_430046 NZ_CAJZAS010000198.1 Protein Homology CDS 41196 41561 . - 0 ID=cds-WP_059537100.1;Parent=gene-LDO45_RS21070;Dbxref=GenBank:WP_059537100.1;Name=WP_059537100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755200.1;locus_tag=LDO45_RS21070;product=hypothetical protein;protein_id=WP_059537100.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 41867 43456 . + . ID=gene-LDO45_RS21075;Name=LDO45_RS21075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21075;old_locus_tag=BDI4_430047 NZ_CAJZAS010000198.1 Protein Homology CDS 41867 43456 . + 0 ID=cds-WP_223963539.1;Parent=gene-LDO45_RS21075;Dbxref=GenBank:WP_223963539.1;Name=WP_223963539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879836.1;locus_tag=LDO45_RS21075;product=ATP-binding protein;protein_id=WP_223963539.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 43461 43793 . - . ID=gene-LDO45_RS21080;Name=LDO45_RS21080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21080;old_locus_tag=BDI4_430048 NZ_CAJZAS010000198.1 Protein Homology CDS 43461 43793 . - 0 ID=cds-WP_059537105.1;Parent=gene-LDO45_RS21080;Dbxref=GenBank:WP_059537105.1;Name=WP_059537105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761714.1;locus_tag=LDO45_RS21080;product=four-helix bundle copper-binding protein;protein_id=WP_059537105.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 43823 45028 . - . ID=gene-LDO45_RS21085;Name=LDO45_RS21085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21085;old_locus_tag=BDI4_430049 NZ_CAJZAS010000198.1 Protein Homology CDS 43823 45028 . - 0 ID=cds-WP_223963439.1;Parent=gene-LDO45_RS21085;Dbxref=GenBank:WP_223963439.1;Name=WP_223963439.1;Ontology_term=GO:0004024,GO:0008270,GO:0030554;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity%2C zinc-dependent|0004024||IEA,zinc ion binding|0008270||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004557884.1;locus_tag=LDO45_RS21085;product=zinc-dependent alcohol dehydrogenase;protein_id=WP_223963439.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 45276 46811 . - . ID=gene-LDO45_RS21090;Name=LDO45_RS21090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21090;old_locus_tag=BDI4_430050 NZ_CAJZAS010000198.1 Protein Homology CDS 45276 46811 . - 0 ID=cds-WP_223963441.1;Parent=gene-LDO45_RS21090;Dbxref=GenBank:WP_223963441.1;Name=WP_223963441.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767477.1;locus_tag=LDO45_RS21090;product=FAD-dependent oxidoreductase;protein_id=WP_223963441.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 47160 47612 . - . ID=gene-LDO45_RS21095;Name=LDO45_RS21095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21095;old_locus_tag=BDI4_430051 NZ_CAJZAS010000198.1 Protein Homology CDS 47160 47612 . - 0 ID=cds-WP_223963443.1;Parent=gene-LDO45_RS21095;Dbxref=GenBank:WP_223963443.1;Name=WP_223963443.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660565.1;locus_tag=LDO45_RS21095;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_223963443.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 47609 47914 . - . ID=gene-LDO45_RS21100;Name=LDO45_RS21100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21100;old_locus_tag=BDI4_430052 NZ_CAJZAS010000198.1 Protein Homology CDS 47609 47914 . - 0 ID=cds-WP_223963445.1;Parent=gene-LDO45_RS21100;Dbxref=GenBank:WP_223963445.1;Name=WP_223963445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498396.1;locus_tag=LDO45_RS21100;product=LysR family transcriptional regulator;protein_id=WP_223963445.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 48327 49400 . + . ID=gene-LDO45_RS21105;Name=LDO45_RS21105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21105;old_locus_tag=BDI4_430053 NZ_CAJZAS010000198.1 Protein Homology CDS 48327 49400 . + 0 ID=cds-WP_223963447.1;Parent=gene-LDO45_RS21105;Dbxref=GenBank:WP_223963447.1;Name=WP_223963447.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498397.1;locus_tag=LDO45_RS21105;product=Dyp-type peroxidase;protein_id=WP_223963447.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 49393 50208 . + . ID=gene-LDO45_RS21110;Name=LDO45_RS21110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21110;old_locus_tag=BDI4_430054 NZ_CAJZAS010000198.1 Protein Homology CDS 49393 50208 . + 0 ID=cds-WP_223963448.1;Parent=gene-LDO45_RS21110;Dbxref=GenBank:WP_223963448.1;Name=WP_223963448.1;Ontology_term=GO:0140737;gbkey=CDS;go_component=encapsulin nanocompartment|0140737||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337541.1;locus_tag=LDO45_RS21110;product=family 1 encapsulin nanocompartment shell protein;protein_id=WP_223963448.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 50309 50578 . + . ID=gene-LDO45_RS21115;Name=LDO45_RS21115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21115;old_locus_tag=BDI4_430055 NZ_CAJZAS010000198.1 Protein Homology CDS 50309 50578 . + 0 ID=cds-WP_223963449.1;Parent=gene-LDO45_RS21115;Dbxref=GenBank:WP_223963449.1;Name=WP_223963449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755575.1;locus_tag=LDO45_RS21115;product=hypothetical protein;protein_id=WP_223963449.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 51016 53295 . + . ID=gene-LDO45_RS21120;Name=LDO45_RS21120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21120;old_locus_tag=BDI4_430056 NZ_CAJZAS010000198.1 Protein Homology CDS 51016 53295 . + 0 ID=cds-WP_223963450.1;Parent=gene-LDO45_RS21120;Dbxref=GenBank:WP_223963450.1;Name=WP_223963450.1;Ontology_term=GO:0016491,GO:0030151,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372719.1;locus_tag=LDO45_RS21120;product=FdhF/YdeP family oxidoreductase;protein_id=WP_223963450.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 53441 54862 . - . ID=gene-LDO45_RS21125;Name=LDO45_RS21125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21125;old_locus_tag=BDI4_430057 NZ_CAJZAS010000198.1 Protein Homology CDS 53441 54862 . - 0 ID=cds-WP_223963451.1;Parent=gene-LDO45_RS21125;Dbxref=GenBank:WP_223963451.1;Name=WP_223963451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407378.1;locus_tag=LDO45_RS21125;product=cytosine permease;protein_id=WP_223963451.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 55188 56111 . + . ID=gene-LDO45_RS21130;Name=LDO45_RS21130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21130;old_locus_tag=BDI4_430058 NZ_CAJZAS010000198.1 Protein Homology CDS 55188 56111 . + 0 ID=cds-WP_059537143.1;Parent=gene-LDO45_RS21130;Dbxref=GenBank:WP_059537143.1;Name=WP_059537143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407376.1;locus_tag=LDO45_RS21130;product=LysR family transcriptional regulator;protein_id=WP_059537143.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 56180 57343 . - . ID=gene-LDO45_RS21135;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=LDO45_RS21135;old_locus_tag=BDI4_430059 NZ_CAJZAS010000198.1 Protein Homology CDS 56180 57343 . - 0 ID=cds-WP_223963452.1;Parent=gene-LDO45_RS21135;Dbxref=GenBank:WP_223963452.1;Name=WP_223963452.1;Ontology_term=GO:0006526,GO:0006592,GO:0008777;gbkey=CDS;gene=argE;go_function=acetylornithine deacetylase activity|0008777||IEA;go_process=arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498406.1;locus_tag=LDO45_RS21135;product=acetylornithine deacetylase;protein_id=WP_223963452.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 57336 58013 . - . ID=gene-LDO45_RS21140;Name=LDO45_RS21140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21140;old_locus_tag=BDI4_430060 NZ_CAJZAS010000198.1 Protein Homology CDS 57336 58013 . - 0 ID=cds-WP_223963462.1;Parent=gene-LDO45_RS21140;Dbxref=GenBank:WP_223963462.1;Name=WP_223963462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767485.1;locus_tag=LDO45_RS21140;product=DUF1028 domain-containing protein;protein_id=WP_223963462.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 58022 58459 . - . ID=gene-LDO45_RS21145;Name=LDO45_RS21145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21145;old_locus_tag=BDI4_430061 NZ_CAJZAS010000198.1 Protein Homology CDS 58022 58459 . - 0 ID=cds-WP_012337533.1;Parent=gene-LDO45_RS21145;Dbxref=GenBank:WP_012337533.1;Name=WP_012337533.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761446.1;locus_tag=LDO45_RS21145;product=RidA family protein;protein_id=WP_012337533.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 58584 59930 . - . ID=gene-LDO45_RS21150;Name=LDO45_RS21150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21150;old_locus_tag=BDI4_430062 NZ_CAJZAS010000198.1 Protein Homology CDS 58584 59930 . - 0 ID=cds-WP_223963464.1;Parent=gene-LDO45_RS21150;Dbxref=GenBank:WP_223963464.1;Name=WP_223963464.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349681.1;locus_tag=LDO45_RS21150;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_223963464.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 60131 60319 . - . ID=gene-LDO45_RS21155;Name=LDO45_RS21155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21155;old_locus_tag=BDI4_430064 NZ_CAJZAS010000198.1 GeneMarkS-2+ CDS 60131 60319 . - 0 ID=cds-WP_223963466.1;Parent=gene-LDO45_RS21155;Dbxref=GenBank:WP_223963466.1;Name=WP_223963466.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS21155;product=hypothetical protein;protein_id=WP_223963466.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 60664 60819 . + . ID=gene-LDO45_RS21160;Name=LDO45_RS21160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21160;old_locus_tag=BDI4_430065 NZ_CAJZAS010000198.1 Protein Homology CDS 60664 60819 . + 0 ID=cds-WP_175910122.1;Parent=gene-LDO45_RS21160;Dbxref=GenBank:WP_175910122.1;Name=WP_175910122.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753127.1;locus_tag=LDO45_RS21160;product=hypothetical protein;protein_id=WP_175910122.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 61026 62039 . + . ID=gene-LDO45_RS21165;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=LDO45_RS21165;old_locus_tag=BDI4_430066 NZ_CAJZAS010000198.1 Protein Homology CDS 61026 62039 . + 0 ID=cds-WP_223963468.1;Parent=gene-LDO45_RS21165;Dbxref=GenBank:WP_223963468.1;Name=WP_223963468.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660578.1;locus_tag=LDO45_RS21165;product=tryptophan--tRNA ligase;protein_id=WP_223963468.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 62132 62545 . - . ID=gene-LDO45_RS21170;Name=LDO45_RS21170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21170;old_locus_tag=BDI4_430067 NZ_CAJZAS010000198.1 Protein Homology CDS 62132 62545 . - 0 ID=cds-WP_059537180.1;Parent=gene-LDO45_RS21170;Dbxref=GenBank:WP_059537180.1;Name=WP_059537180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337523.1;locus_tag=LDO45_RS21170;product=VOC family protein;protein_id=WP_059537180.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 62703 63089 . - . ID=gene-LDO45_RS21175;Name=LDO45_RS21175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21175;old_locus_tag=BDI4_430068 NZ_CAJZAS010000198.1 Protein Homology CDS 62703 63089 . - 0 ID=cds-WP_059817111.1;Parent=gene-LDO45_RS21175;Dbxref=GenBank:WP_059817111.1;Name=WP_059817111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753125.1;locus_tag=LDO45_RS21175;product=VOC family protein;protein_id=WP_059817111.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 63138 64058 . - . ID=gene-LDO45_RS21180;Name=LDO45_RS21180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21180;old_locus_tag=BDI4_430069 NZ_CAJZAS010000198.1 Protein Homology CDS 63138 64058 . - 0 ID=cds-WP_059693175.1;Parent=gene-LDO45_RS21180;Dbxref=GenBank:WP_059693175.1;Name=WP_059693175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349660.1;locus_tag=LDO45_RS21180;product=bestrophin family protein;protein_id=WP_059693175.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 64211 65218 . - . ID=gene-LDO45_RS21185;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=LDO45_RS21185;old_locus_tag=BDI4_430070 NZ_CAJZAS010000198.1 Protein Homology CDS 64211 65218 . - 0 ID=cds-WP_059537186.1;Parent=gene-LDO45_RS21185;Dbxref=GenBank:WP_059537186.1;Name=WP_059537186.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011349659.1;locus_tag=LDO45_RS21185;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_059537186.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 65222 66622 . - . ID=gene-LDO45_RS21190;Name=LDO45_RS21190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21190;old_locus_tag=BDI4_430071 NZ_CAJZAS010000198.1 Protein Homology CDS 65222 66622 . - 0 ID=cds-WP_059537191.1;Parent=gene-LDO45_RS21190;Dbxref=GenBank:WP_059537191.1;Name=WP_059537191.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498424.1;locus_tag=LDO45_RS21190;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_059537191.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 67328 68446 . + . ID=gene-LDO45_RS21195;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=LDO45_RS21195;old_locus_tag=BDI4_430072 NZ_CAJZAS010000198.1 Protein Homology CDS 67328 68446 . + 0 ID=cds-WP_223963471.1;Parent=gene-LDO45_RS21195;Dbxref=GenBank:WP_223963471.1;Name=WP_223963471.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498427.1;locus_tag=LDO45_RS21195;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_223963471.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 68496 69011 . + . ID=gene-LDO45_RS21200;Name=LDO45_RS21200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21200;old_locus_tag=BDI4_430073 NZ_CAJZAS010000198.1 Protein Homology CDS 68496 69011 . + 0 ID=cds-WP_223963473.1;Parent=gene-LDO45_RS21200;Dbxref=GenBank:WP_223963473.1;Name=WP_223963473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372744.1;locus_tag=LDO45_RS21200;product=molybdenum cofactor biosynthesis protein MoaE;protein_id=WP_223963473.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 69073 69330 . + . ID=gene-LDO45_RS21205;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=LDO45_RS21205;old_locus_tag=BDI4_430074 NZ_CAJZAS010000198.1 Protein Homology CDS 69073 69330 . + 0 ID=cds-WP_223963540.1;Parent=gene-LDO45_RS21205;Dbxref=GenBank:WP_223963540.1;Name=WP_223963540.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=moaD;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498429.1;locus_tag=LDO45_RS21205;product=molybdopterin converting factor subunit 1;protein_id=WP_223963540.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 69390 70052 . - . ID=gene-LDO45_RS21210;Name=LDO45_RS21210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21210;old_locus_tag=BDI4_430075 NZ_CAJZAS010000198.1 Protein Homology CDS 69390 70052 . - 0 ID=cds-WP_223963476.1;Parent=gene-LDO45_RS21210;Dbxref=GenBank:WP_223963476.1;Name=WP_223963476.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754675.1;locus_tag=LDO45_RS21210;product=glutathione S-transferase family protein;protein_id=WP_223963476.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 70222 71232 . + . ID=gene-LDO45_RS21215;Name=LDO45_RS21215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21215;old_locus_tag=BDI4_430076 NZ_CAJZAS010000198.1 Protein Homology CDS 70222 71232 . + 0 ID=cds-WP_223963478.1;Parent=gene-LDO45_RS21215;Dbxref=GenBank:WP_223963478.1;Name=WP_223963478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350168.1;locus_tag=LDO45_RS21215;product=YafY family protein;protein_id=WP_223963478.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 71754 74339 . + . ID=gene-LDO45_RS21220;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=LDO45_RS21220;old_locus_tag=BDI4_430079 NZ_CAJZAS010000198.1 Protein Homology CDS 71754 74339 . + 0 ID=cds-WP_223963480.1;Parent=gene-LDO45_RS21220;Dbxref=GenBank:WP_223963480.1;Name=WP_223963480.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004633909.1;locus_tag=LDO45_RS21220;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_223963480.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 74684 75691 . - . ID=gene-LDO45_RS21225;Name=LDO45_RS21225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21225;old_locus_tag=BDI4_430080 NZ_CAJZAS010000198.1 Protein Homology CDS 74684 75691 . - 0 ID=cds-WP_063892218.1;Parent=gene-LDO45_RS21225;Dbxref=GenBank:WP_063892218.1;Name=WP_063892218.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025030.5;locus_tag=LDO45_RS21225;product=HEAT repeat domain-containing protein;protein_id=WP_063892218.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 75828 76505 . - . ID=gene-LDO45_RS21230;Name=LDO45_RS21230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21230;old_locus_tag=BDI4_430081 NZ_CAJZAS010000198.1 Protein Homology CDS 75828 76505 . - 0 ID=cds-WP_223963482.1;Parent=gene-LDO45_RS21230;Dbxref=GenBank:WP_223963482.1;Name=WP_223963482.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009074029.1;locus_tag=LDO45_RS21230;product=HEAT repeat domain-containing protein;protein_id=WP_223963482.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 76722 77012 . + . ID=gene-LDO45_RS21235;Name=LDO45_RS21235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21235;old_locus_tag=BDI4_430082 NZ_CAJZAS010000198.1 Protein Homology CDS 76722 77012 . + 0 ID=cds-WP_059692804.1;Parent=gene-LDO45_RS21235;Dbxref=GenBank:WP_059692804.1;Name=WP_059692804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882618.1;locus_tag=LDO45_RS21235;product=hypothetical protein;protein_id=WP_059692804.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 77268 78125 . - . ID=gene-LDO45_RS21240;Name=LDO45_RS21240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21240;old_locus_tag=BDI4_430084 NZ_CAJZAS010000198.1 Protein Homology CDS 77268 78125 . - 0 ID=cds-WP_223963484.1;Parent=gene-LDO45_RS21240;Dbxref=GenBank:WP_223963484.1;Name=WP_223963484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363560.1;locus_tag=LDO45_RS21240;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_223963484.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 78248 79117 . - . ID=gene-LDO45_RS21245;Name=LDO45_RS21245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21245;old_locus_tag=BDI4_430085 NZ_CAJZAS010000198.1 Protein Homology CDS 78248 79117 . - 0 ID=cds-WP_109343286.1;Parent=gene-LDO45_RS21245;Dbxref=GenBank:WP_109343286.1;Name=WP_109343286.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363561.1;locus_tag=LDO45_RS21245;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_109343286.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 79104 80075 . - . ID=gene-LDO45_RS21250;Name=LDO45_RS21250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21250;old_locus_tag=BDI4_430086 NZ_CAJZAS010000198.1 Protein Homology CDS 79104 80075 . - 0 ID=cds-WP_308051252.1;Parent=gene-LDO45_RS21250;Dbxref=GenBank:WP_308051252.1;Name=WP_308051252.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011695112.1;locus_tag=LDO45_RS21250;product=alpha/beta fold hydrolase;protein_id=WP_308051252.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 80119 80730 . + . ID=gene-LDO45_RS21255;Name=LDO45_RS21255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21255;old_locus_tag=BDI4_430088 NZ_CAJZAS010000198.1 Protein Homology CDS 80119 80730 . + 0 ID=cds-WP_223963486.1;Parent=gene-LDO45_RS21255;Dbxref=GenBank:WP_223963486.1;Name=WP_223963486.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363563.1;locus_tag=LDO45_RS21255;product=TetR/AcrR family transcriptional regulator;protein_id=WP_223963486.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 81168 81764 . + . ID=gene-LDO45_RS21260;Name=LDO45_RS21260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21260;old_locus_tag=BDI4_430089 NZ_CAJZAS010000198.1 Protein Homology CDS 81168 81764 . + 0 ID=cds-WP_059692800.1;Parent=gene-LDO45_RS21260;Dbxref=GenBank:WP_059692800.1;Name=WP_059692800.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690855.1;locus_tag=LDO45_RS21260;product=TetR/AcrR family transcriptional regulator;protein_id=WP_059692800.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 81813 83294 . + . ID=gene-LDO45_RS21265;Name=LDO45_RS21265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21265;old_locus_tag=BDI4_430090 NZ_CAJZAS010000198.1 Protein Homology CDS 81813 83294 . + 0 ID=cds-WP_223963487.1;Parent=gene-LDO45_RS21265;Dbxref=GenBank:WP_223963487.1;Name=WP_223963487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483292.1;locus_tag=LDO45_RS21265;product=MFS transporter;protein_id=WP_223963487.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 83543 84967 . - . ID=gene-LDO45_RS21275;Name=LDO45_RS21275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21275;old_locus_tag=BDI4_430091 NZ_CAJZAS010000198.1 Protein Homology CDS 83543 84967 . - 0 ID=cds-WP_223963489.1;Parent=gene-LDO45_RS21275;Dbxref=GenBank:WP_223963489.1;Name=WP_223963489.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398842.1;locus_tag=LDO45_RS21275;product=PLP-dependent aminotransferase family protein;protein_id=WP_223963489.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 85625 87037 . - . ID=gene-LDO45_RS21280;Name=LDO45_RS21280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21280;old_locus_tag=BDI4_430092 NZ_CAJZAS010000198.1 Protein Homology CDS 85625 87037 . - 0 ID=cds-WP_223963491.1;Parent=gene-LDO45_RS21280;Dbxref=GenBank:WP_223963491.1;Name=WP_223963491.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331357.1;locus_tag=LDO45_RS21280;product=PLP-dependent aminotransferase family protein;protein_id=WP_223963491.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 87269 88498 . + . ID=gene-LDO45_RS21285;Name=LDO45_RS21285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21285;old_locus_tag=BDI4_430093 NZ_CAJZAS010000198.1 Protein Homology CDS 87269 88498 . + 0 ID=cds-WP_223963493.1;Parent=gene-LDO45_RS21285;Dbxref=GenBank:WP_223963493.1;Name=WP_223963493.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761812.1;locus_tag=LDO45_RS21285;product=FAD-binding oxidoreductase;protein_id=WP_223963493.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 88535 89683 . + . ID=gene-LDO45_RS21290;Name=LDO45_RS21290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21290;old_locus_tag=BDI4_430094 NZ_CAJZAS010000198.1 Protein Homology CDS 88535 89683 . + 0 ID=cds-WP_223963495.1;Parent=gene-LDO45_RS21290;Dbxref=GenBank:WP_223963495.1;Name=WP_223963495.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545635.1;locus_tag=LDO45_RS21290;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_223963495.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 89715 90626 . - . ID=gene-LDO45_RS21295;Name=LDO45_RS21295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21295;old_locus_tag=BDI4_430095 NZ_CAJZAS010000198.1 Protein Homology CDS 89715 90626 . - 0 ID=cds-WP_223963497.1;Parent=gene-LDO45_RS21295;Dbxref=GenBank:WP_223963497.1;Name=WP_223963497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753109.1;locus_tag=LDO45_RS21295;product=hypothetical protein;protein_id=WP_223963497.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 90687 91010 . - . ID=gene-LDO45_RS21300;Name=LDO45_RS21300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21300;old_locus_tag=BDI4_430096 NZ_CAJZAS010000198.1 Protein Homology CDS 90687 91010 . - 0 ID=cds-WP_223963499.1;Parent=gene-LDO45_RS21300;Dbxref=GenBank:WP_223963499.1;Name=WP_223963499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481332.1;locus_tag=LDO45_RS21300;product=TfoX/Sxy family protein;protein_id=WP_223963499.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 91101 92837 . - . ID=gene-LDO45_RS21305;Name=LDO45_RS21305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21305;old_locus_tag=BDI4_430097 NZ_CAJZAS010000198.1 Protein Homology CDS 91101 92837 . - 0 ID=cds-WP_223963501.1;Parent=gene-LDO45_RS21305;Dbxref=GenBank:WP_223963501.1;Name=WP_223963501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407352.1;locus_tag=LDO45_RS21305;product=site-specific integrase;protein_id=WP_223963501.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 92936 94201 . - . ID=gene-LDO45_RS21310;Name=LDO45_RS21310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21310;old_locus_tag=BDI4_430098 NZ_CAJZAS010000198.1 Protein Homology CDS 92936 94201 . - 0 ID=cds-WP_223963503.1;Parent=gene-LDO45_RS21310;Dbxref=GenBank:WP_223963503.1;Name=WP_223963503.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372753.1;locus_tag=LDO45_RS21310;product=nitrate/nitrite transporter;protein_id=WP_223963503.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 94217 95005 . - . ID=gene-LDO45_RS21315;Name=LDO45_RS21315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21315;old_locus_tag=BDI4_430099 NZ_CAJZAS010000198.1 Protein Homology CDS 94217 95005 . - 0 ID=cds-WP_223963505.1;Parent=gene-LDO45_RS21315;Dbxref=GenBank:WP_223963505.1;Name=WP_223963505.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402923.1;locus_tag=LDO45_RS21315;product=peptidylprolyl isomerase;protein_id=WP_223963505.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 95015 95698 . - . ID=gene-LDO45_RS21320;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=LDO45_RS21320;old_locus_tag=BDI4_430100 NZ_CAJZAS010000198.1 Protein Homology CDS 95015 95698 . - 0 ID=cds-WP_223963507.1;Parent=gene-LDO45_RS21320;Dbxref=GenBank:WP_223963507.1;Name=WP_223963507.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004528383.1;locus_tag=LDO45_RS21320;product=respiratory nitrate reductase subunit gamma;protein_id=WP_223963507.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 95723 96418 . - . ID=gene-LDO45_RS21325;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=LDO45_RS21325;old_locus_tag=BDI4_430101 NZ_CAJZAS010000198.1 Protein Homology CDS 95723 96418 . - 0 ID=cds-WP_223963509.1;Parent=gene-LDO45_RS21325;Dbxref=GenBank:WP_223963509.1;Name=WP_223963509.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402921.1;locus_tag=LDO45_RS21325;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_223963509.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 96415 97944 . - . ID=gene-LDO45_RS21330;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=LDO45_RS21330;old_locus_tag=BDI4_430102 NZ_CAJZAS010000198.1 Protein Homology CDS 96415 97944 . - 0 ID=cds-WP_223963512.1;Parent=gene-LDO45_RS21330;Dbxref=GenBank:WP_223963512.1;Name=WP_223963512.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011205549.1;locus_tag=LDO45_RS21330;product=nitrate reductase subunit beta;protein_id=WP_223963512.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 97941 101720 . - . ID=gene-LDO45_RS21335;Name=LDO45_RS21335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21335;old_locus_tag=BDI4_430103 NZ_CAJZAS010000198.1 Protein Homology CDS 97941 101720 . - 0 ID=cds-WP_223963514.1;Parent=gene-LDO45_RS21335;Dbxref=GenBank:WP_223963514.1;Name=WP_223963514.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217825.1;locus_tag=LDO45_RS21335;product=nitrate reductase subunit alpha;protein_id=WP_223963514.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 102410 102601 . - . ID=gene-LDO45_RS21340;Name=LDO45_RS21340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21340;old_locus_tag=BDI4_430105 NZ_CAJZAS010000198.1 Protein Homology CDS 102410 102601 . - 0 ID=cds-WP_059537270.1;Parent=gene-LDO45_RS21340;Dbxref=GenBank:WP_059537270.1;Name=WP_059537270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660611.1;locus_tag=LDO45_RS21340;product=DUF2964 family protein;protein_id=WP_059537270.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 102616 103095 . - . ID=gene-LDO45_RS21345;Name=LDO45_RS21345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21345;old_locus_tag=BDI4_430106 NZ_CAJZAS010000198.1 Protein Homology CDS 102616 103095 . - 0 ID=cds-WP_059692769.1;Parent=gene-LDO45_RS21345;Dbxref=GenBank:WP_059692769.1;Name=WP_059692769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545640.1;locus_tag=LDO45_RS21345;product=universal stress protein;protein_id=WP_059692769.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 103361 104122 . + . ID=gene-LDO45_RS21350;Name=LDO45_RS21350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21350;old_locus_tag=BDI4_430107 NZ_CAJZAS010000198.1 Protein Homology CDS 103361 104122 . + 0 ID=cds-WP_223963523.1;Parent=gene-LDO45_RS21350;Dbxref=GenBank:WP_223963523.1;Name=WP_223963523.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372760.1;locus_tag=LDO45_RS21350;product=2-keto-4-pentenoate hydratase;protein_id=WP_223963523.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 104293 105699 . + . ID=gene-LDO45_RS21355;Name=LDO45_RS21355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21355;old_locus_tag=BDI4_430108 NZ_CAJZAS010000198.1 Protein Homology CDS 104293 105699 . + 0 ID=cds-WP_223963525.1;Parent=gene-LDO45_RS21355;Dbxref=GenBank:WP_223963525.1;Name=WP_223963525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879800.1;locus_tag=LDO45_RS21355;product=3-deoxy-D-arabino-heptulosonate 7-phosphate synthase;protein_id=WP_223963525.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 105886 106722 . - . ID=gene-LDO45_RS21360;Name=LDO45_RS21360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21360;old_locus_tag=BDI4_430109 NZ_CAJZAS010000198.1 Protein Homology CDS 105886 106722 . - 0 ID=cds-WP_059692763.1;Parent=gene-LDO45_RS21360;Dbxref=GenBank:WP_059692763.1;Name=WP_059692763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879797.1;locus_tag=LDO45_RS21360;product=alpha/beta fold hydrolase;protein_id=WP_059692763.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 106978 107811 . - . ID=gene-LDO45_RS21365;Name=LDO45_RS21365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21365;old_locus_tag=BDI4_430110 NZ_CAJZAS010000198.1 Protein Homology CDS 106978 107811 . - 0 ID=cds-WP_223963527.1;Parent=gene-LDO45_RS21365;Dbxref=GenBank:WP_223963527.1;Name=WP_223963527.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879796.1;locus_tag=LDO45_RS21365;product=oxidoreductase;protein_id=WP_223963527.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 107906 108877 . + . ID=gene-LDO45_RS21370;Name=LDO45_RS21370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21370;old_locus_tag=BDI4_430111 NZ_CAJZAS010000198.1 Protein Homology CDS 107906 108877 . + 0 ID=cds-WP_223963529.1;Parent=gene-LDO45_RS21370;Dbxref=GenBank:WP_223963529.1;Name=WP_223963529.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660624.1;locus_tag=LDO45_RS21370;product=AraC family transcriptional regulator;protein_id=WP_223963529.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 109239 110165 . + . ID=gene-LDO45_RS21375;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=LDO45_RS21375;old_locus_tag=BDI4_430112 NZ_CAJZAS010000198.1 Protein Homology CDS 109239 110165 . + 0 ID=cds-WP_223963531.1;Parent=gene-LDO45_RS21375;Dbxref=GenBank:WP_223963531.1;Name=WP_223963531.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013690716.1;locus_tag=LDO45_RS21375;product=ribokinase;protein_id=WP_223963531.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 110209 111582 . + . ID=gene-LDO45_RS21380;Name=fucP;gbkey=Gene;gene=fucP;gene_biotype=protein_coding;locus_tag=LDO45_RS21380;old_locus_tag=BDI4_430113 NZ_CAJZAS010000198.1 Protein Homology CDS 110209 111582 . + 0 ID=cds-WP_223963533.1;Parent=gene-LDO45_RS21380;Dbxref=GenBank:WP_223963533.1;Name=WP_223963533.1;Ontology_term=GO:0015756,GO:0015150,GO:0015535;gbkey=CDS;gene=fucP;go_function=fucose transmembrane transporter activity|0015150||IEA,fucose:proton symporter activity|0015535||IEA;go_process=fucose transmembrane transport|0015756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489743.1;locus_tag=LDO45_RS21380;product=L-fucose:H+ symporter permease;protein_id=WP_223963533.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 111621 112391 . - . ID=gene-LDO45_RS21385;Name=deoR;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=LDO45_RS21385;old_locus_tag=BDI4_430114 NZ_CAJZAS010000198.1 Protein Homology CDS 111621 112391 . - 0 ID=cds-WP_223963534.1;Parent=gene-LDO45_RS21385;Dbxref=GenBank:WP_223963534.1;Name=WP_223963534.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=deoR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335555.1;locus_tag=LDO45_RS21385;product=DNA-binding transcriptional repressor DeoR;protein_id=WP_223963534.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 112538 113218 . + . ID=gene-LDO45_RS21390;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=LDO45_RS21390;old_locus_tag=BDI4_430115 NZ_CAJZAS010000198.1 Protein Homology CDS 112538 113218 . + 0 ID=cds-WP_223963535.1;Parent=gene-LDO45_RS21390;Dbxref=GenBank:WP_223963535.1;Name=WP_223963535.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481432.1;locus_tag=LDO45_RS21390;product=deoxyribose-phosphate aldolase;protein_id=WP_223963535.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 113364 116885 . - . ID=gene-LDO45_RS21395;Name=LDO45_RS21395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21395;old_locus_tag=BDI4_430116 NZ_CAJZAS010000198.1 Protein Homology CDS 113364 116885 . - 0 ID=cds-WP_223963536.1;Parent=gene-LDO45_RS21395;Dbxref=GenBank:WP_223963536.1;Name=WP_223963536.1;Ontology_term=GO:0006090,GO:0006094,GO:0004736,GO:0005524,GO:0009374,GO:0046872;gbkey=CDS;go_function=pyruvate carboxylase activity|0004736||IEA,ATP binding|0005524||IEA,biotin binding|0009374||IEA,metal ion binding|0046872||IEA;go_process=pyruvate metabolic process|0006090||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751154.1;locus_tag=LDO45_RS21395;product=pyruvate carboxylase;protein_id=WP_223963536.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 118123 119115 . - . ID=gene-LDO45_RS21400;Name=LDO45_RS21400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21400;old_locus_tag=BDI4_430120 NZ_CAJZAS010000198.1 GeneMarkS-2+ CDS 118123 119115 . - 0 ID=cds-WP_223963537.1;Parent=gene-LDO45_RS21400;Dbxref=GenBank:WP_223963537.1;Name=WP_223963537.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS21400;product=hypothetical protein;protein_id=WP_223963537.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 119630 120484 . - . ID=gene-LDO45_RS21405;Name=LDO45_RS21405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21405;old_locus_tag=BDI4_430122 NZ_CAJZAS010000198.1 Protein Homology CDS 119630 120484 . - 0 ID=cds-WP_059537302.1;Parent=gene-LDO45_RS21405;Dbxref=GenBank:WP_059537302.1;Name=WP_059537302.1;Ontology_term=GO:0006631;gbkey=CDS;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337246.1;locus_tag=LDO45_RS21405;product=3-hydroxybutyryl-CoA dehydrogenase;protein_id=WP_059537302.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq gene 120523 121716 . - . ID=gene-LDO45_RS21410;Name=bktB;gbkey=Gene;gene=bktB;gene_biotype=protein_coding;locus_tag=LDO45_RS21410;old_locus_tag=BDI4_430123 NZ_CAJZAS010000198.1 Protein Homology CDS 120523 121716 . - 0 ID=cds-WP_223963538.1;Parent=gene-LDO45_RS21410;Dbxref=GenBank:WP_223963538.1;Name=WP_223963538.1;Ontology_term=GO:0003985;gbkey=CDS;gene=bktB;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337245.1;locus_tag=LDO45_RS21410;product=beta-ketothiolase BktB;protein_id=WP_223963538.1;transl_table=11 NZ_CAJZAS010000198.1 RefSeq pseudogene 121766 122220 . - . ID=gene-LDO45_RS21415;Name=LDO45_RS21415;end_range=122220,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS21415;partial=true;pseudo=true NZ_CAJZAS010000198.1 Protein Homology CDS 121766 122220 . - 0 ID=cds-LDO45_RS21415;Parent=gene-LDO45_RS21415;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing N-terminus;Ontology_term=GO:0022900,GO:0004174,GO:0046872,GO:0051539;end_range=122220,.;gbkey=CDS;go_function=electron-transferring-flavoprotein dehydrogenase activity|0004174||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015003297.1;locus_tag=LDO45_RS21415;partial=true;product=electron transfer flavoprotein-ubiquinone oxidoreductase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000199.1 1 23692 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000199.1 RefSeq region 1 23692 . + . ID=NZ_CAJZAS010000199.1:1..23692;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_44 NZ_CAJZAS010000199.1 RefSeq gene 55 303 . - . ID=gene-LDO45_RS21420;Name=LDO45_RS21420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21420;old_locus_tag=BDI4_440001 NZ_CAJZAS010000199.1 Protein Homology CDS 55 303 . - 0 ID=cds-WP_223963544.1;Parent=gene-LDO45_RS21420;Dbxref=GenBank:WP_223963544.1;Name=WP_223963544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660340.1;locus_tag=LDO45_RS21420;product=hypothetical protein;protein_id=WP_223963544.1;transl_table=11 NZ_CAJZAS010000199.1 RefSeq gene 598 888 . + . ID=gene-LDO45_RS21425;Name=LDO45_RS21425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21425;old_locus_tag=BDI4_440002 NZ_CAJZAS010000199.1 Protein Homology CDS 598 888 . + 0 ID=cds-WP_059531872.1;Parent=gene-LDO45_RS21425;Dbxref=GenBank:WP_059531872.1;Name=WP_059531872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750791.1;locus_tag=LDO45_RS21425;product=DUF4148 domain-containing protein;protein_id=WP_059531872.1;transl_table=11 NZ_CAJZAS010000199.1 RefSeq gene 983 2410 . - . ID=gene-LDO45_RS21430;Name=LDO45_RS21430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21430;old_locus_tag=BDI4_440003 NZ_CAJZAS010000199.1 Protein Homology CDS 983 2410 . - 0 ID=cds-WP_223963546.1;Parent=gene-LDO45_RS21430;Dbxref=GenBank:WP_223963546.1;Name=WP_223963546.1;Ontology_term=GO:0000160,GO:0016310,GO:0000155,GO:0004673,GO:0016772,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490474.1;locus_tag=LDO45_RS21430;product=heavy metal sensor histidine kinase;protein_id=WP_223963546.1;transl_table=11 NZ_CAJZAS010000199.1 RefSeq gene 2407 3090 . - . ID=gene-LDO45_RS21435;Name=irlR;gbkey=Gene;gene=irlR;gene_biotype=protein_coding;locus_tag=LDO45_RS21435;old_locus_tag=BDI4_440004 NZ_CAJZAS010000199.1 Protein Homology CDS 2407 3090 . - 0 ID=cds-WP_059466657.1;Parent=gene-LDO45_RS21435;Dbxref=GenBank:WP_059466657.1;Name=WP_059466657.1;gbkey=CDS;gene=irlR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490455.1;locus_tag=LDO45_RS21435;product=heavy metal response regulator transcription factor IrlR;protein_id=WP_059466657.1;transl_table=11 NZ_CAJZAS010000199.1 RefSeq gene 3090 6302 . - . ID=gene-LDO45_RS21440;Name=LDO45_RS21440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21440;old_locus_tag=BDI4_440005 NZ_CAJZAS010000199.1 Protein Homology CDS 3090 6302 . - 0 ID=cds-WP_223963548.1;Parent=gene-LDO45_RS21440;Dbxref=GenBank:WP_223963548.1;Name=WP_223963548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548324.1;locus_tag=LDO45_RS21440;product=efflux RND transporter permease subunit;protein_id=WP_223963548.1;transl_table=11 NZ_CAJZAS010000199.1 RefSeq gene 6359 7828 . - . ID=gene-LDO45_RS21445;Name=LDO45_RS21445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21445;old_locus_tag=BDI4_440006 NZ_CAJZAS010000199.1 Protein Homology CDS 6359 7828 . - 0 ID=cds-WP_223963550.1;Parent=gene-LDO45_RS21445;Dbxref=GenBank:WP_223963550.1;Name=WP_223963550.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493151.1;locus_tag=LDO45_RS21445;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_223963550.1;transl_table=11 NZ_CAJZAS010000199.1 RefSeq gene 7855 9159 . - . ID=gene-LDO45_RS21450;Name=LDO45_RS21450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21450;old_locus_tag=BDI4_440007 NZ_CAJZAS010000199.1 Protein Homology CDS 7855 9159 . - 0 ID=cds-WP_223963552.1;Parent=gene-LDO45_RS21450;Dbxref=GenBank:WP_223963552.1;Name=WP_223963552.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482767.1;locus_tag=LDO45_RS21450;product=TolC family protein;protein_id=WP_223963552.1;transl_table=11 NZ_CAJZAS010000199.1 RefSeq gene 9388 10596 . - . ID=gene-LDO45_RS21455;Name=LDO45_RS21455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21455;old_locus_tag=BDI4_440008 NZ_CAJZAS010000199.1 Protein Homology CDS 9388 10596 . - 0 ID=cds-WP_223963554.1;Parent=gene-LDO45_RS21455;Dbxref=GenBank:WP_223963554.1;Name=WP_223963554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496091.1;locus_tag=LDO45_RS21455;product=phosphotransferase enzyme family protein;protein_id=WP_223963554.1;transl_table=11 NZ_CAJZAS010000199.1 RefSeq gene 10633 11244 . - . ID=gene-LDO45_RS21460;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=LDO45_RS21460;old_locus_tag=BDI4_440009 NZ_CAJZAS010000199.1 Protein Homology CDS 10633 11244 . - 0 ID=cds-WP_059531890.1;Parent=gene-LDO45_RS21460;Dbxref=GenBank:WP_059531890.1;Name=WP_059531890.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759336.1;locus_tag=LDO45_RS21460;product=nicotinamide riboside transporter PnuC;protein_id=WP_059531890.1;transl_table=11 NZ_CAJZAS010000199.1 RefSeq gene 11304 13535 . - . ID=gene-LDO45_RS21465;Name=LDO45_RS21465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21465;old_locus_tag=BDI4_440010 NZ_CAJZAS010000199.1 Protein Homology CDS 11304 13535 . - 0 ID=cds-WP_223963556.1;Parent=gene-LDO45_RS21465;Dbxref=GenBank:WP_223963556.1;Name=WP_223963556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750788.1;locus_tag=LDO45_RS21465;product=TonB-dependent siderophore receptor;protein_id=WP_223963556.1;transl_table=11 NZ_CAJZAS010000199.1 RefSeq gene 14144 14347 . - . ID=gene-LDO45_RS21470;Name=LDO45_RS21470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21470;old_locus_tag=BDI4_440012 NZ_CAJZAS010000199.1 Protein Homology CDS 14144 14347 . - 0 ID=cds-WP_059531896.1;Parent=gene-LDO45_RS21470;Dbxref=GenBank:WP_059531896.1;Name=WP_059531896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900233.1;locus_tag=LDO45_RS21470;product=DUF2970 domain-containing protein;protein_id=WP_059531896.1;transl_table=11 NZ_CAJZAS010000199.1 RefSeq pseudogene 14472 16562 . - . ID=gene-LDO45_RS21475;Name=LDO45_RS21475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS21475;pseudo=true NZ_CAJZAS010000199.1 Protein Homology CDS 14472 16562 . - 0 ID=cds-LDO45_RS21475;Parent=gene-LDO45_RS21475;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759547.1;locus_tag=LDO45_RS21475;product=pyridoxamine 5'-phosphate oxidase family protein;pseudo=true;transl_table=11 NZ_CAJZAS010000199.1 RefSeq gene 16594 17238 . - . ID=gene-LDO45_RS21480;Name=LDO45_RS21480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21480;old_locus_tag=BDI4_440015 NZ_CAJZAS010000199.1 Protein Homology CDS 16594 17238 . - 0 ID=cds-WP_223963558.1;Parent=gene-LDO45_RS21480;Dbxref=GenBank:WP_223963558.1;Name=WP_223963558.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900235.1;locus_tag=LDO45_RS21480;product=glutathione S-transferase family protein;protein_id=WP_223963558.1;transl_table=11 NZ_CAJZAS010000199.1 RefSeq gene 17365 18309 . + . ID=gene-LDO45_RS21485;Name=LDO45_RS21485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21485;old_locus_tag=BDI4_440016 NZ_CAJZAS010000199.1 Protein Homology CDS 17365 18309 . + 0 ID=cds-WP_059699736.1;Parent=gene-LDO45_RS21485;Dbxref=GenBank:WP_059699736.1;Name=WP_059699736.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486155.1;locus_tag=LDO45_RS21485;product=LysR family transcriptional regulator;protein_id=WP_059699736.1;transl_table=11 NZ_CAJZAS010000199.1 RefSeq gene 18373 19029 . - . ID=gene-LDO45_RS21490;Name=LDO45_RS21490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21490;old_locus_tag=BDI4_440017 NZ_CAJZAS010000199.1 Protein Homology CDS 18373 19029 . - 0 ID=cds-WP_223963560.1;Parent=gene-LDO45_RS21490;Dbxref=GenBank:WP_223963560.1;Name=WP_223963560.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750782.1;locus_tag=LDO45_RS21490;product=TetR/AcrR family transcriptional regulator;protein_id=WP_223963560.1;transl_table=11 NZ_CAJZAS010000199.1 RefSeq gene 19118 20020 . + . ID=gene-LDO45_RS21495;Name=LDO45_RS21495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21495;old_locus_tag=BDI4_440018 NZ_CAJZAS010000199.1 Protein Homology CDS 19118 20020 . + 0 ID=cds-WP_059689452.1;Parent=gene-LDO45_RS21495;Dbxref=GenBank:WP_059689452.1;Name=WP_059689452.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004529196.1;locus_tag=LDO45_RS21495;product=SDR family oxidoreductase;protein_id=WP_059689452.1;transl_table=11 NZ_CAJZAS010000199.1 RefSeq gene 20017 21579 . + . ID=gene-LDO45_RS21500;Name=LDO45_RS21500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21500;old_locus_tag=BDI4_440019 NZ_CAJZAS010000199.1 Protein Homology CDS 20017 21579 . + 0 ID=cds-WP_223963562.1;Parent=gene-LDO45_RS21500;Dbxref=GenBank:WP_223963562.1;Name=WP_223963562.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217562.1;locus_tag=LDO45_RS21500;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_223963562.1;transl_table=11 NZ_CAJZAS010000199.1 RefSeq gene 21587 22573 . + . ID=gene-LDO45_RS21505;Name=LDO45_RS21505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21505;old_locus_tag=BDI4_440020 NZ_CAJZAS010000199.1 Protein Homology CDS 21587 22573 . + 0 ID=cds-WP_223963564.1;Parent=gene-LDO45_RS21505;Dbxref=GenBank:WP_223963564.1;Name=WP_223963564.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365449.1;locus_tag=LDO45_RS21505;product=alpha/beta fold hydrolase;protein_id=WP_223963564.1;transl_table=11 NZ_CAJZAS010000199.1 RefSeq gene 22614 23012 . - . ID=gene-LDO45_RS21510;Name=LDO45_RS21510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21510;old_locus_tag=BDI4_440021 NZ_CAJZAS010000199.1 Protein Homology CDS 22614 23012 . - 0 ID=cds-WP_059689450.1;Parent=gene-LDO45_RS21510;Dbxref=GenBank:WP_059689450.1;Name=WP_059689450.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759539.1;locus_tag=LDO45_RS21510;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_059689450.1;transl_table=11 NZ_CAJZAS010000199.1 RefSeq gene 23390 23692 . - . ID=gene-LDO45_RS34290;Name=LDO45_RS34290;end_range=23692,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34290;old_locus_tag=BDI4_440023;partial=true NZ_CAJZAS010000199.1 Protein Homology CDS 23390 23692 . - 0 ID=cds-WP_290371028.1;Parent=gene-LDO45_RS34290;Dbxref=GenBank:WP_290371028.1;Name=WP_290371028.1;end_range=23692,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766882.1;locus_tag=LDO45_RS34290;partial=true;product=hypothetical protein;protein_id=WP_290371028.1;transl_table=11 ##sequence-region NZ_CAJZAS010000200.1 1 66949 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000200.1 RefSeq region 1 66949 . + . ID=NZ_CAJZAS010000200.1:1..66949;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_45 NZ_CAJZAS010000200.1 RefSeq pseudogene 114 1951 . + . ID=gene-LDO45_RS34295;Name=LDO45_RS34295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34295;old_locus_tag=BDI4_450001;pseudo=true NZ_CAJZAS010000200.1 Protein Homology CDS 114 1951 . + 0 ID=cds-LDO45_RS34295;Parent=gene-LDO45_RS34295;Note=frameshifted%3B too many ambiguous residues;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339942.1;locus_tag=LDO45_RS34295;product=amino acid ABC transporter permease/ATP-binding protein;pseudo=true;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 1986 2915 . + . ID=gene-LDO45_RS21530;Name=LDO45_RS21530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21530;old_locus_tag=BDI4_450003 NZ_CAJZAS010000200.1 Protein Homology CDS 1986 2915 . + 0 ID=cds-WP_223963567.1;Parent=gene-LDO45_RS21530;Dbxref=GenBank:WP_223963567.1;Name=WP_223963567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494830.1;locus_tag=LDO45_RS21530;product=ABC transporter substrate-binding protein;protein_id=WP_223963567.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 3032 3559 . - . ID=gene-LDO45_RS21535;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=LDO45_RS21535;old_locus_tag=BDI4_450004 NZ_CAJZAS010000200.1 Protein Homology CDS 3032 3559 . - 0 ID=cds-WP_223963569.1;Parent=gene-LDO45_RS21535;Dbxref=GenBank:WP_223963569.1;Name=WP_223963569.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494498.1;locus_tag=LDO45_RS21535;product=type VI secretion system lipoprotein TssJ;protein_id=WP_223963569.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 3651 4421 . - . ID=gene-LDO45_RS21540;Name=LDO45_RS21540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21540;old_locus_tag=BDI4_450005 NZ_CAJZAS010000200.1 GeneMarkS-2+ CDS 3651 4421 . - 0 ID=cds-WP_223963571.1;Parent=gene-LDO45_RS21540;Dbxref=GenBank:WP_223963571.1;Name=WP_223963571.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS21540;product=hypothetical protein;protein_id=WP_223963571.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 4781 5251 . - . ID=gene-LDO45_RS21545;Name=LDO45_RS21545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21545 NZ_CAJZAS010000200.1 Protein Homology CDS 4781 5251 . - 0 ID=cds-WP_223963573.1;Parent=gene-LDO45_RS21545;Dbxref=GenBank:WP_223963573.1;Name=WP_223963573.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018684.5;locus_tag=LDO45_RS21545;product=lysozyme inhibitor LprI family protein;protein_id=WP_223963573.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 5265 6389 . - . ID=gene-LDO45_RS21550;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=LDO45_RS21550;old_locus_tag=BDI4_450010 NZ_CAJZAS010000200.1 Protein Homology CDS 5265 6389 . - 0 ID=cds-WP_223963575.1;Parent=gene-LDO45_RS21550;Dbxref=GenBank:WP_223963575.1;Name=WP_223963575.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494499.1;locus_tag=LDO45_RS21550;product=type VI secretion system baseplate subunit TssG;protein_id=WP_223963575.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 6386 8200 . - . ID=gene-LDO45_RS21555;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LDO45_RS21555;old_locus_tag=BDI4_450011 NZ_CAJZAS010000200.1 Protein Homology CDS 6386 8200 . - 0 ID=cds-WP_223963577.1;Parent=gene-LDO45_RS21555;Dbxref=GenBank:WP_223963577.1;Name=WP_223963577.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750258.1;locus_tag=LDO45_RS21555;product=type VI secretion system baseplate subunit TssF;protein_id=WP_223963577.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 8213 12673 . - . ID=gene-LDO45_RS21560;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=LDO45_RS21560;old_locus_tag=BDI4_450012 NZ_CAJZAS010000200.1 Protein Homology CDS 8213 12673 . - 0 ID=cds-WP_223963579.1;Parent=gene-LDO45_RS21560;Dbxref=GenBank:WP_223963579.1;Name=WP_223963579.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756605.1;locus_tag=LDO45_RS21560;product=type VI secretion system protein TssA;protein_id=WP_223963579.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 12670 13908 . - . ID=gene-LDO45_RS21565;Name=LDO45_RS21565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21565;old_locus_tag=BDI4_450013 NZ_CAJZAS010000200.1 Protein Homology CDS 12670 13908 . - 0 ID=cds-WP_223963581.1;Parent=gene-LDO45_RS21565;Dbxref=GenBank:WP_223963581.1;Name=WP_223963581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365526.1;locus_tag=LDO45_RS21565;product=hypothetical protein;protein_id=WP_223963581.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 13912 14169 . - . ID=gene-LDO45_RS21570;Name=LDO45_RS21570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21570;old_locus_tag=BDI4_450014 NZ_CAJZAS010000200.1 Protein Homology CDS 13912 14169 . - 0 ID=cds-WP_223963583.1;Parent=gene-LDO45_RS21570;Dbxref=GenBank:WP_223963583.1;Name=WP_223963583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010095276.1;locus_tag=LDO45_RS21570;product=PAAR domain-containing protein;protein_id=WP_223963583.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 14166 14603 . - . ID=gene-LDO45_RS21575;Name=LDO45_RS21575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21575 NZ_CAJZAS010000200.1 GeneMarkS-2+ CDS 14166 14603 . - 0 ID=cds-WP_223963584.1;Parent=gene-LDO45_RS21575;Dbxref=GenBank:WP_223963584.1;Name=WP_223963584.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS21575;product=hypothetical protein;protein_id=WP_223963584.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 15108 15722 . - . ID=gene-LDO45_RS21580;Name=LDO45_RS21580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21580;old_locus_tag=BDI4_450018 NZ_CAJZAS010000200.1 Protein Homology CDS 15108 15722 . - 0 ID=cds-WP_223963586.1;Parent=gene-LDO45_RS21580;Dbxref=GenBank:WP_223963586.1;Name=WP_223963586.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012409.5;locus_tag=LDO45_RS21580;product=glycoside hydrolase family 19 protein;protein_id=WP_223963586.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 15726 16061 . - . ID=gene-LDO45_RS21585;Name=LDO45_RS21585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21585;old_locus_tag=BDI4_450019 NZ_CAJZAS010000200.1 GeneMarkS-2+ CDS 15726 16061 . - 0 ID=cds-WP_223963587.1;Parent=gene-LDO45_RS21585;Dbxref=GenBank:WP_223963587.1;Name=WP_223963587.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS21585;product=hypothetical protein;protein_id=WP_223963587.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 16174 17202 . - . ID=gene-LDO45_RS21590;Name=LDO45_RS21590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21590;old_locus_tag=BDI4_450020 NZ_CAJZAS010000200.1 GeneMarkS-2+ CDS 16174 17202 . - 0 ID=cds-WP_223963589.1;Parent=gene-LDO45_RS21590;Dbxref=GenBank:WP_223963589.1;Name=WP_223963589.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS21590;product=hypothetical protein;protein_id=WP_223963589.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 17196 19763 . - . ID=gene-LDO45_RS21595;Name=LDO45_RS21595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21595;old_locus_tag=BDI4_450022 NZ_CAJZAS010000200.1 Protein Homology CDS 17196 19763 . - 0 ID=cds-WP_223963591.1;Parent=gene-LDO45_RS21595;Dbxref=GenBank:WP_223963591.1;Name=WP_223963591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756609.1;locus_tag=LDO45_RS21595;product=glycoside hydrolase family 19 protein;protein_id=WP_223963591.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq pseudogene 19871 21061 . - . ID=gene-LDO45_RS21600;Name=LDO45_RS21600;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS21600;old_locus_tag=BDI4_450023;partial=true;pseudo=true;start_range=.,19871 NZ_CAJZAS010000200.1 Protein Homology CDS 19871 21061 . - 0 ID=cds-LDO45_RS21600;Parent=gene-LDO45_RS21600;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479548.1;locus_tag=LDO45_RS21600;partial=true;product=type VI secretion system Vgr family protein;pseudo=true;start_range=.,19871;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 21148 22680 . - . ID=gene-LDO45_RS21605;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=LDO45_RS21605;old_locus_tag=BDI4_450024 NZ_CAJZAS010000200.1 Protein Homology CDS 21148 22680 . - 0 ID=cds-WP_223963593.1;Parent=gene-LDO45_RS21605;Dbxref=GenBank:WP_223963593.1;Name=WP_223963593.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733082.1;locus_tag=LDO45_RS21605;product=type VI secretion system contractile sheath large subunit;protein_id=WP_223963593.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 22754 23266 . - . ID=gene-LDO45_RS21610;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=LDO45_RS21610;old_locus_tag=BDI4_450025 NZ_CAJZAS010000200.1 Protein Homology CDS 22754 23266 . - 0 ID=cds-WP_059700463.1;Parent=gene-LDO45_RS21610;Dbxref=GenBank:WP_059700463.1;Name=WP_059700463.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018434326.1;locus_tag=LDO45_RS21610;product=type VI secretion system contractile sheath small subunit;protein_id=WP_059700463.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 23842 25194 . + . ID=gene-LDO45_RS21615;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=LDO45_RS21615;old_locus_tag=BDI4_450027 NZ_CAJZAS010000200.1 Protein Homology CDS 23842 25194 . + 0 ID=cds-WP_223963599.1;Parent=gene-LDO45_RS21615;Dbxref=GenBank:WP_223963599.1;Name=WP_223963599.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765961.1;locus_tag=LDO45_RS21615;product=type VI secretion system baseplate subunit TssK;protein_id=WP_223963599.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 25191 25931 . + . ID=gene-LDO45_RS21620;Name=LDO45_RS21620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21620;old_locus_tag=BDI4_450028 NZ_CAJZAS010000200.1 Protein Homology CDS 25191 25931 . + 0 ID=cds-WP_223963600.1;Parent=gene-LDO45_RS21620;Dbxref=GenBank:WP_223963600.1;Name=WP_223963600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733888.1;locus_tag=LDO45_RS21620;product=DotU family type IV/VI secretion system protein;protein_id=WP_223963600.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 25928 27655 . + . ID=gene-LDO45_RS21625;Name=LDO45_RS21625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21625;old_locus_tag=BDI4_450029 NZ_CAJZAS010000200.1 Protein Homology CDS 25928 27655 . + 0 ID=cds-WP_223963605.1;Parent=gene-LDO45_RS21625;Dbxref=GenBank:WP_223963605.1;Name=WP_223963605.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726095.1;locus_tag=LDO45_RS21625;product=OmpA family protein;protein_id=WP_223963605.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 27750 28235 . + . ID=gene-LDO45_RS21630;Name=LDO45_RS21630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21630;old_locus_tag=BDI4_450030 NZ_CAJZAS010000200.1 Protein Homology CDS 27750 28235 . + 0 ID=cds-WP_059690140.1;Parent=gene-LDO45_RS21630;Dbxref=GenBank:WP_059690140.1;Name=WP_059690140.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007587801.1;locus_tag=LDO45_RS21630;product=Hcp family type VI secretion system effector;protein_id=WP_059690140.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 28370 31075 . + . ID=gene-LDO45_RS21635;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=LDO45_RS21635;old_locus_tag=BDI4_450031 NZ_CAJZAS010000200.1 Protein Homology CDS 28370 31075 . + 0 ID=cds-WP_223963614.1;Parent=gene-LDO45_RS21635;Dbxref=GenBank:WP_223963614.1;Name=WP_223963614.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:TIGR03345.1;locus_tag=LDO45_RS21635;product=type VI secretion system ATPase TssH;protein_id=WP_223963614.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 31089 31523 . + . ID=gene-LDO45_RS21640;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=LDO45_RS21640;old_locus_tag=BDI4_450032 NZ_CAJZAS010000200.1 Protein Homology CDS 31089 31523 . + 0 ID=cds-WP_059700474.1;Parent=gene-LDO45_RS21640;Dbxref=GenBank:WP_059700474.1;Name=WP_059700474.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765966.1;locus_tag=LDO45_RS21640;product=type VI secretion system baseplate subunit TssE;protein_id=WP_059700474.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq pseudogene 31566 31667 . - . ID=gene-LDO45_RS21645;Name=LDO45_RS21645;end_range=31667,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS21645;partial=true;pseudo=true;start_range=.,31566 NZ_CAJZAS010000200.1 Protein Homology CDS 31566 31667 . - 0 ID=cds-LDO45_RS21645;Parent=gene-LDO45_RS21645;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=31667,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339939.1;locus_tag=LDO45_RS21645;partial=true;product=ABC transporter substrate-binding protein;pseudo=true;start_range=.,31566;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 31814 32731 . + . ID=gene-LDO45_RS21650;Name=LDO45_RS21650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21650;old_locus_tag=BDI4_450034 NZ_CAJZAS010000200.1 Protein Homology CDS 31814 32731 . + 0 ID=cds-WP_223963616.1;Parent=gene-LDO45_RS21650;Dbxref=GenBank:WP_223963616.1;Name=WP_223963616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355130.1;locus_tag=LDO45_RS21650;product=serine aminopeptidase domain-containing protein;protein_id=WP_223963616.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 32728 33159 . + . ID=gene-LDO45_RS21655;Name=LDO45_RS21655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21655;old_locus_tag=BDI4_450033 NZ_CAJZAS010000200.1 Protein Homology CDS 32728 33159 . + 0 ID=cds-WP_059690144.1;Parent=gene-LDO45_RS21655;Dbxref=GenBank:WP_059690144.1;Name=WP_059690144.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882272.1;locus_tag=LDO45_RS21655;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_059690144.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 33620 35080 . + . ID=gene-LDO45_RS21660;Name=LDO45_RS21660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21660;old_locus_tag=BDI4_450035 NZ_CAJZAS010000200.1 Protein Homology CDS 33620 35080 . + 0 ID=cds-WP_223963618.1;Parent=gene-LDO45_RS21660;Dbxref=GenBank:WP_223963618.1;Name=WP_223963618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397007.1;locus_tag=LDO45_RS21660;product=sialidase family protein;protein_id=WP_223963618.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 35145 36173 . - . ID=gene-LDO45_RS21665;Name=adhP;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;locus_tag=LDO45_RS21665;old_locus_tag=BDI4_450036 NZ_CAJZAS010000200.1 Protein Homology CDS 35145 36173 . - 0 ID=cds-WP_223963620.1;Parent=gene-LDO45_RS21665;Dbxref=GenBank:WP_223963620.1;Name=WP_223963620.1;gbkey=CDS;gene=adhP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760344.1;locus_tag=LDO45_RS21665;product=alcohol dehydrogenase AdhP;protein_id=WP_223963620.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 36635 38662 . + . ID=gene-LDO45_RS21670;Name=LDO45_RS21670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21670;old_locus_tag=BDI4_450037 NZ_CAJZAS010000200.1 Protein Homology CDS 36635 38662 . + 0 ID=cds-WP_223963622.1;Parent=gene-LDO45_RS21670;Dbxref=GenBank:WP_223963622.1;Name=WP_223963622.1;Ontology_term=GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760343.1;locus_tag=LDO45_RS21670;product=TonB-dependent receptor;protein_id=WP_223963622.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 39035 40672 . + . ID=gene-LDO45_RS21675;Name=LDO45_RS21675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21675;old_locus_tag=BDI4_450040 NZ_CAJZAS010000200.1 Protein Homology CDS 39035 40672 . + 0 ID=cds-WP_223963624.1;Parent=gene-LDO45_RS21675;Dbxref=GenBank:WP_223963624.1;Name=WP_223963624.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414800.1;locus_tag=LDO45_RS21675;product=methyl-accepting chemotaxis protein;protein_id=WP_223963624.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 41144 42550 . + . ID=gene-LDO45_RS21680;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=LDO45_RS21680;old_locus_tag=BDI4_450041 NZ_CAJZAS010000200.1 Protein Homology CDS 41144 42550 . + 0 ID=cds-WP_059525559.1;Parent=gene-LDO45_RS21680;Dbxref=GenBank:WP_059525559.1;Name=WP_059525559.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899315.1;locus_tag=LDO45_RS21680;product=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming);protein_id=WP_059525559.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 42573 43040 . - . ID=gene-LDO45_RS21685;Name=LDO45_RS21685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21685;old_locus_tag=BDI4_450042 NZ_CAJZAS010000200.1 Protein Homology CDS 42573 43040 . - 0 ID=cds-WP_059525561.1;Parent=gene-LDO45_RS21685;Dbxref=GenBank:WP_059525561.1;Name=WP_059525561.1;Ontology_term=GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899314.1;locus_tag=LDO45_RS21685;product=OsmC family protein;protein_id=WP_059525561.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 43166 45133 . - . ID=gene-LDO45_RS21690;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=LDO45_RS21690;old_locus_tag=BDI4_450043 NZ_CAJZAS010000200.1 Protein Homology CDS 43166 45133 . - 0 ID=cds-WP_059525563.1;Parent=gene-LDO45_RS21690;Dbxref=GenBank:WP_059525563.1;Name=WP_059525563.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494820.1;locus_tag=LDO45_RS21690;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_059525563.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 45547 47211 . + . ID=gene-LDO45_RS21695;Name=LDO45_RS21695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21695;old_locus_tag=BDI4_450045 NZ_CAJZAS010000200.1 Protein Homology CDS 45547 47211 . + 0 ID=cds-WP_223963626.1;Parent=gene-LDO45_RS21695;Dbxref=GenBank:WP_223963626.1;Name=WP_223963626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753586.1;locus_tag=LDO45_RS21695;product=acid phosphatase;protein_id=WP_223963626.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 47309 48805 . - . ID=gene-LDO45_RS21700;Name=LDO45_RS21700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21700;old_locus_tag=BDI4_450046 NZ_CAJZAS010000200.1 Protein Homology CDS 47309 48805 . - 0 ID=cds-WP_059690233.1;Parent=gene-LDO45_RS21700;Dbxref=GenBank:WP_059690233.1;Name=WP_059690233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483070.1;locus_tag=LDO45_RS21700;product=FAD-dependent oxidoreductase;protein_id=WP_059690233.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 49100 49309 . - . ID=gene-LDO45_RS21705;Name=LDO45_RS21705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21705;old_locus_tag=BDI4_450047 NZ_CAJZAS010000200.1 Protein Homology CDS 49100 49309 . - 0 ID=cds-WP_059525742.1;Parent=gene-LDO45_RS21705;Dbxref=GenBank:WP_059525742.1;Name=WP_059525742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753588.1;locus_tag=LDO45_RS21705;product=hypothetical protein;protein_id=WP_059525742.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 49762 50178 . + . ID=gene-LDO45_RS21710;Name=LDO45_RS21710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21710;old_locus_tag=BDI4_450048 NZ_CAJZAS010000200.1 Protein Homology CDS 49762 50178 . + 0 ID=cds-WP_059525569.1;Parent=gene-LDO45_RS21710;Dbxref=GenBank:WP_059525569.1;Name=WP_059525569.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329417.1;locus_tag=LDO45_RS21710;product=nuclear transport factor 2 family protein;protein_id=WP_059525569.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 50182 51039 . + . ID=gene-LDO45_RS21715;Name=LDO45_RS21715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21715;old_locus_tag=BDI4_450049 NZ_CAJZAS010000200.1 Protein Homology CDS 50182 51039 . + 0 ID=cds-WP_223963628.1;Parent=gene-LDO45_RS21715;Dbxref=GenBank:WP_223963628.1;Name=WP_223963628.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899308.1;locus_tag=LDO45_RS21715;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_223963628.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 51081 51839 . + . ID=gene-LDO45_RS21720;Name=LDO45_RS21720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21720;old_locus_tag=BDI4_450050 NZ_CAJZAS010000200.1 Protein Homology CDS 51081 51839 . + 0 ID=cds-WP_223963630.1;Parent=gene-LDO45_RS21720;Dbxref=GenBank:WP_223963630.1;Name=WP_223963630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018009066.1;locus_tag=LDO45_RS21720;product=SDR family oxidoreductase;protein_id=WP_223963630.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 51877 52713 . + . ID=gene-LDO45_RS21725;Name=LDO45_RS21725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21725;old_locus_tag=BDI4_450051 NZ_CAJZAS010000200.1 Protein Homology CDS 51877 52713 . + 0 ID=cds-WP_059525575.1;Parent=gene-LDO45_RS21725;Dbxref=GenBank:WP_059525575.1;Name=WP_059525575.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899306.1;locus_tag=LDO45_RS21725;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_059525575.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 52792 53697 . + . ID=gene-LDO45_RS21730;Name=LDO45_RS21730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21730;old_locus_tag=BDI4_450052 NZ_CAJZAS010000200.1 Protein Homology CDS 52792 53697 . + 0 ID=cds-WP_059525577.1;Parent=gene-LDO45_RS21730;Dbxref=GenBank:WP_059525577.1;Name=WP_059525577.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899305.1;locus_tag=LDO45_RS21730;product=NAD(P)-dependent oxidoreductase;protein_id=WP_059525577.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 53836 55701 . - . ID=gene-LDO45_RS21735;Name=LDO45_RS21735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21735;old_locus_tag=BDI4_450053 NZ_CAJZAS010000200.1 Protein Homology CDS 53836 55701 . - 0 ID=cds-WP_223963632.1;Parent=gene-LDO45_RS21735;Dbxref=GenBank:WP_223963632.1;Name=WP_223963632.1;Ontology_term=GO:0006094,GO:0004611,GO:0005525,GO:0017076;gbkey=CDS;go_function=phosphoenolpyruvate carboxykinase activity|0004611||IEA,GTP binding|0005525||IEA,purine nucleotide binding|0017076||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483011.1;locus_tag=LDO45_RS21735;product=phosphoenolpyruvate carboxykinase (GTP);protein_id=WP_223963632.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 56226 57002 . - . ID=gene-LDO45_RS21740;Name=LDO45_RS21740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21740;old_locus_tag=BDI4_450054 NZ_CAJZAS010000200.1 Protein Homology CDS 56226 57002 . - 0 ID=cds-WP_223963634.1;Parent=gene-LDO45_RS21740;Dbxref=GenBank:WP_223963634.1;Name=WP_223963634.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899303.1;locus_tag=LDO45_RS21740;product=glucose 1-dehydrogenase;protein_id=WP_223963634.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 57100 57855 . - . ID=gene-LDO45_RS21745;Name=LDO45_RS21745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21745;old_locus_tag=BDI4_450055 NZ_CAJZAS010000200.1 Protein Homology CDS 57100 57855 . - 0 ID=cds-WP_059690154.1;Parent=gene-LDO45_RS21745;Dbxref=GenBank:WP_059690154.1;Name=WP_059690154.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483036.1;locus_tag=LDO45_RS21745;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_059690154.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 57865 58731 . - . ID=gene-LDO45_RS21750;Name=LDO45_RS21750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21750;old_locus_tag=BDI4_450056 NZ_CAJZAS010000200.1 Protein Homology CDS 57865 58731 . - 0 ID=cds-WP_059525585.1;Parent=gene-LDO45_RS21750;Dbxref=GenBank:WP_059525585.1;Name=WP_059525585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483006.1;locus_tag=LDO45_RS21750;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_059525585.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 58784 59284 . - . ID=gene-LDO45_RS21755;Name=LDO45_RS21755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21755;old_locus_tag=BDI4_450057 NZ_CAJZAS010000200.1 Protein Homology CDS 58784 59284 . - 0 ID=cds-WP_223963636.1;Parent=gene-LDO45_RS21755;Dbxref=GenBank:WP_223963636.1;Name=WP_223963636.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329427.1;locus_tag=LDO45_RS21755;product=nuclear transport factor 2 family protein;protein_id=WP_223963636.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 59495 60016 . + . ID=gene-LDO45_RS21760;Name=LDO45_RS21760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21760;old_locus_tag=BDI4_450058 NZ_CAJZAS010000200.1 Protein Homology CDS 59495 60016 . + 0 ID=cds-WP_223963638.1;Parent=gene-LDO45_RS21760;Dbxref=GenBank:WP_223963638.1;Name=WP_223963638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899299.1;locus_tag=LDO45_RS21760;product=nuclear transport factor 2 family protein;protein_id=WP_223963638.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 60067 60783 . + . ID=gene-LDO45_RS21765;Name=LDO45_RS21765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21765;old_locus_tag=BDI4_450059 NZ_CAJZAS010000200.1 Protein Homology CDS 60067 60783 . + 0 ID=cds-WP_223963640.1;Parent=gene-LDO45_RS21765;Dbxref=GenBank:WP_223963640.1;Name=WP_223963640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899298.1;locus_tag=LDO45_RS21765;product=EthD domain-containing protein;protein_id=WP_223963640.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 60837 62423 . - . ID=gene-LDO45_RS21770;Name=LDO45_RS21770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21770;old_locus_tag=BDI4_450060 NZ_CAJZAS010000200.1 Protein Homology CDS 60837 62423 . - 0 ID=cds-WP_059525594.1;Parent=gene-LDO45_RS21770;Dbxref=GenBank:WP_059525594.1;Name=WP_059525594.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757553.1;locus_tag=LDO45_RS21770;product=isocitrate lyase;protein_id=WP_059525594.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 62836 63357 . + . ID=gene-LDO45_RS21775;Name=LDO45_RS21775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21775;old_locus_tag=BDI4_450061 NZ_CAJZAS010000200.1 Protein Homology CDS 62836 63357 . + 0 ID=cds-WP_223963642.1;Parent=gene-LDO45_RS21775;Dbxref=GenBank:WP_223963642.1;Name=WP_223963642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754025.1;locus_tag=LDO45_RS21775;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_223963642.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 63354 63992 . + . ID=gene-LDO45_RS21780;Name=LDO45_RS21780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21780;old_locus_tag=BDI4_450062 NZ_CAJZAS010000200.1 Protein Homology CDS 63354 63992 . + 0 ID=cds-WP_059450358.1;Parent=gene-LDO45_RS21780;Dbxref=GenBank:WP_059450358.1;Name=WP_059450358.1;Ontology_term=GO:0003677,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,transcription regulator activity|0140110||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757555.1;locus_tag=LDO45_RS21780;product=transcriptional regulator;protein_id=WP_059450358.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 64047 65021 . + . ID=gene-LDO45_RS21785;Name=LDO45_RS21785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21785;old_locus_tag=BDI4_450063 NZ_CAJZAS010000200.1 Protein Homology CDS 64047 65021 . + 0 ID=cds-WP_059690160.1;Parent=gene-LDO45_RS21785;Dbxref=GenBank:WP_059690160.1;Name=WP_059690160.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339928.1;locus_tag=LDO45_RS21785;product=threo-3-hydroxy-L-aspartate ammonia-lyase;protein_id=WP_059690160.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 65152 65400 . + . ID=gene-LDO45_RS21790;Name=LDO45_RS21790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21790;old_locus_tag=BDI4_450064 NZ_CAJZAS010000200.1 Protein Homology CDS 65152 65400 . + 0 ID=cds-WP_059700520.1;Parent=gene-LDO45_RS21790;Dbxref=GenBank:WP_059700520.1;Name=WP_059700520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547650.1;locus_tag=LDO45_RS21790;product=hypothetical protein;protein_id=WP_059700520.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq gene 65447 66271 . - . ID=gene-LDO45_RS21795;Name=LDO45_RS21795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21795;old_locus_tag=BDI4_450065 NZ_CAJZAS010000200.1 Protein Homology CDS 65447 66271 . - 0 ID=cds-WP_223963643.1;Parent=gene-LDO45_RS21795;Dbxref=GenBank:WP_223963643.1;Name=WP_223963643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754029.1;locus_tag=LDO45_RS21795;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_223963643.1;transl_table=11 NZ_CAJZAS010000200.1 RefSeq pseudogene 66273 66949 . - . ID=gene-LDO45_RS21800;Name=LDO45_RS21800;end_range=66949,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS21800;old_locus_tag=BDI4_450066;partial=true;pseudo=true NZ_CAJZAS010000200.1 Protein Homology CDS 66273 66949 . - 1 ID=cds-LDO45_RS21800;Parent=gene-LDO45_RS21800;Note=frameshifted%3B incomplete%3B missing N-terminus;end_range=66949,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018007458.1;locus_tag=LDO45_RS21800;partial=true;product=SDR family NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000201.1 1 29995 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000201.1 RefSeq region 1 29995 . + . ID=NZ_CAJZAS010000201.1:1..29995;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_46 NZ_CAJZAS010000201.1 RefSeq gene 19 1005 . + . ID=gene-LDO45_RS21805;Name=LDO45_RS21805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21805;old_locus_tag=BDI4_460002 NZ_CAJZAS010000201.1 Protein Homology CDS 19 1005 . + 0 ID=cds-WP_223963659.1;Parent=gene-LDO45_RS21805;Dbxref=GenBank:WP_223963659.1;Name=WP_223963659.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546396.1;locus_tag=LDO45_RS21805;product=ABC transporter permease subunit;protein_id=WP_223963659.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 1002 1841 . + . ID=gene-LDO45_RS21810;Name=LDO45_RS21810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21810;old_locus_tag=BDI4_460003 NZ_CAJZAS010000201.1 Protein Homology CDS 1002 1841 . + 0 ID=cds-WP_059535122.1;Parent=gene-LDO45_RS21810;Dbxref=GenBank:WP_059535122.1;Name=WP_059535122.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760185.1;locus_tag=LDO45_RS21810;product=ABC transporter permease subunit;protein_id=WP_059535122.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 1942 3516 . + . ID=gene-LDO45_RS21815;Name=LDO45_RS21815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21815;old_locus_tag=BDI4_460004 NZ_CAJZAS010000201.1 Protein Homology CDS 1942 3516 . + 0 ID=cds-WP_175915012.1;Parent=gene-LDO45_RS21815;Dbxref=GenBank:WP_175915012.1;Name=WP_175915012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411185.1;locus_tag=LDO45_RS21815;product=DUF3138 family protein;protein_id=WP_175915012.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 3629 4933 . + . ID=gene-LDO45_RS21820;Name=LDO45_RS21820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21820;old_locus_tag=BDI4_460005 NZ_CAJZAS010000201.1 Protein Homology CDS 3629 4933 . + 0 ID=cds-WP_223963646.1;Parent=gene-LDO45_RS21820;Dbxref=GenBank:WP_223963646.1;Name=WP_223963646.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495491.1;locus_tag=LDO45_RS21820;product=FAD-binding oxidoreductase;protein_id=WP_223963646.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 4959 6260 . + . ID=gene-LDO45_RS21825;Name=LDO45_RS21825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21825;old_locus_tag=BDI4_460006 NZ_CAJZAS010000201.1 Protein Homology CDS 4959 6260 . + 0 ID=cds-WP_223963648.1;Parent=gene-LDO45_RS21825;Dbxref=GenBank:WP_223963648.1;Name=WP_223963648.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477579.1;locus_tag=LDO45_RS21825;product=FAD-binding oxidoreductase;protein_id=WP_223963648.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 6384 7049 . - . ID=gene-LDO45_RS21830;Name=LDO45_RS21830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21830;old_locus_tag=BDI4_460007 NZ_CAJZAS010000201.1 Protein Homology CDS 6384 7049 . - 0 ID=cds-WP_059535116.1;Parent=gene-LDO45_RS21830;Dbxref=GenBank:WP_059535116.1;Name=WP_059535116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202783.1;locus_tag=LDO45_RS21830;product=DUF799 domain-containing protein;protein_id=WP_059535116.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 7060 7488 . - . ID=gene-LDO45_RS21835;Name=LDO45_RS21835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21835;old_locus_tag=BDI4_460008 NZ_CAJZAS010000201.1 Protein Homology CDS 7060 7488 . - 0 ID=cds-WP_059535114.1;Parent=gene-LDO45_RS21835;Dbxref=GenBank:WP_059535114.1;Name=WP_059535114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364887.1;locus_tag=LDO45_RS21835;product=DUF4810 domain-containing protein;protein_id=WP_059535114.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 7571 8242 . - . ID=gene-LDO45_RS21840;Name=LDO45_RS21840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21840;old_locus_tag=BDI4_460009 NZ_CAJZAS010000201.1 Protein Homology CDS 7571 8242 . - 0 ID=cds-WP_223963661.1;Parent=gene-LDO45_RS21840;Dbxref=GenBank:WP_223963661.1;Name=WP_223963661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484289.1;locus_tag=LDO45_RS21840;product=CsgG/HfaB family protein;protein_id=WP_223963661.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 8322 8525 . + . ID=gene-LDO45_RS21845;Name=LDO45_RS21845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21845;old_locus_tag=BDI4_460010 NZ_CAJZAS010000201.1 GeneMarkS-2+ CDS 8322 8525 . + 0 ID=cds-WP_223963650.1;Parent=gene-LDO45_RS21845;Dbxref=GenBank:WP_223963650.1;Name=WP_223963650.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS21845;product=hypothetical protein;protein_id=WP_223963650.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 8696 10051 . - . ID=gene-LDO45_RS21850;Name=gor;gbkey=Gene;gene=gor;gene_biotype=protein_coding;locus_tag=LDO45_RS21850;old_locus_tag=BDI4_460011 NZ_CAJZAS010000201.1 Protein Homology CDS 8696 10051 . - 0 ID=cds-WP_223963652.1;Parent=gene-LDO45_RS21850;Dbxref=GenBank:WP_223963652.1;Name=WP_223963652.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gor;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495494.1;locus_tag=LDO45_RS21850;product=glutathione-disulfide reductase;protein_id=WP_223963652.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 10296 10520 . - . ID=gene-LDO45_RS21855;Name=LDO45_RS21855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21855;old_locus_tag=BDI4_460012 NZ_CAJZAS010000201.1 Protein Homology CDS 10296 10520 . - 0 ID=cds-WP_014895816.1;Parent=gene-LDO45_RS21855;Dbxref=GenBank:WP_014895816.1;Name=WP_014895816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753937.1;locus_tag=LDO45_RS21855;product=hypothetical protein;protein_id=WP_014895816.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 10894 12015 . - . ID=gene-LDO45_RS21860;Name=LDO45_RS21860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21860;old_locus_tag=BDI4_460013 NZ_CAJZAS010000201.1 Protein Homology CDS 10894 12015 . - 0 ID=cds-WP_059535109.1;Parent=gene-LDO45_RS21860;Dbxref=GenBank:WP_059535109.1;Name=WP_059535109.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492356.1;locus_tag=LDO45_RS21860;product=porin;protein_id=WP_059535109.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 12379 13131 . - . ID=gene-LDO45_RS21865;Name=LDO45_RS21865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21865;old_locus_tag=BDI4_460014 NZ_CAJZAS010000201.1 Protein Homology CDS 12379 13131 . - 0 ID=cds-WP_059535108.1;Parent=gene-LDO45_RS21865;Dbxref=GenBank:WP_059535108.1;Name=WP_059535108.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895814.1;locus_tag=LDO45_RS21865;product=YoaK family protein;protein_id=WP_059535108.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 13190 13717 . - . ID=gene-LDO45_RS21870;Name=LDO45_RS21870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21870;old_locus_tag=BDI4_460015 NZ_CAJZAS010000201.1 Protein Homology CDS 13190 13717 . - 0 ID=cds-WP_059535107.1;Parent=gene-LDO45_RS21870;Dbxref=GenBank:WP_059535107.1;Name=WP_059535107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546406.1;locus_tag=LDO45_RS21870;product=chromate transporter;protein_id=WP_059535107.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 13714 14328 . - . ID=gene-LDO45_RS21875;Name=LDO45_RS21875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21875;old_locus_tag=BDI4_460016 NZ_CAJZAS010000201.1 Protein Homology CDS 13714 14328 . - 0 ID=cds-WP_059819906.1;Parent=gene-LDO45_RS21875;Dbxref=GenBank:WP_059819906.1;Name=WP_059819906.1;Ontology_term=GO:0015703,GO:0015109;gbkey=CDS;go_function=chromate transmembrane transporter activity|0015109||IEA;go_process=chromate transport|0015703||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364895.1;locus_tag=LDO45_RS21875;product=chromate transporter;protein_id=WP_059819906.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 14425 15309 . + . ID=gene-LDO45_RS21880;Name=LDO45_RS21880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21880;old_locus_tag=BDI4_460017 NZ_CAJZAS010000201.1 Protein Homology CDS 14425 15309 . + 0 ID=cds-WP_059535104.1;Parent=gene-LDO45_RS21880;Dbxref=GenBank:WP_059535104.1;Name=WP_059535104.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658134.1;locus_tag=LDO45_RS21880;product=transcriptional regulator GcvA;protein_id=WP_059535104.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 15351 16658 . - . ID=gene-LDO45_RS21885;Name=LDO45_RS21885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21885;old_locus_tag=BDI4_460018 NZ_CAJZAS010000201.1 Protein Homology CDS 15351 16658 . - 0 ID=cds-WP_059691967.1;Parent=gene-LDO45_RS21885;Dbxref=GenBank:WP_059691967.1;Name=WP_059691967.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004542894.1;locus_tag=LDO45_RS21885;product=solute carrier family 23 protein;protein_id=WP_059691967.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 16906 18144 . - . ID=gene-LDO45_RS21890;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=LDO45_RS21890;old_locus_tag=BDI4_460019 NZ_CAJZAS010000201.1 Protein Homology CDS 16906 18144 . - 0 ID=cds-WP_223963654.1;Parent=gene-LDO45_RS21890;Dbxref=GenBank:WP_223963654.1;Name=WP_223963654.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523038.1;locus_tag=LDO45_RS21890;product=flagellar hook-associated protein FlgL;protein_id=WP_223963654.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 18168 20150 . - . ID=gene-LDO45_RS21895;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=LDO45_RS21895;old_locus_tag=BDI4_460020 NZ_CAJZAS010000201.1 Protein Homology CDS 18168 20150 . - 0 ID=cds-WP_059535098.1;Parent=gene-LDO45_RS21895;Dbxref=GenBank:WP_059535098.1;Name=WP_059535098.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601449.1;locus_tag=LDO45_RS21895;product=flagellar hook-associated protein FlgK;protein_id=WP_059535098.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 20345 21100 . - . ID=gene-LDO45_RS21900;Name=LDO45_RS21900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21900;old_locus_tag=BDI4_460021 NZ_CAJZAS010000201.1 Protein Homology CDS 20345 21100 . - 0 ID=cds-WP_059535097.1;Parent=gene-LDO45_RS21900;Dbxref=GenBank:WP_059535097.1;Name=WP_059535097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024243.1;locus_tag=LDO45_RS21900;product=flagellar brake protein;protein_id=WP_059535097.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 21337 22335 . - . ID=gene-LDO45_RS21905;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=LDO45_RS21905;old_locus_tag=BDI4_460023 NZ_CAJZAS010000201.1 Protein Homology CDS 21337 22335 . - 0 ID=cds-WP_059535095.1;Parent=gene-LDO45_RS21905;Dbxref=GenBank:WP_059535095.1;Name=WP_059535095.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364900.1;locus_tag=LDO45_RS21905;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_059535095.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 22336 23532 . - . ID=gene-LDO45_RS21910;Name=LDO45_RS21910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21910;old_locus_tag=BDI4_460024 NZ_CAJZAS010000201.1 Protein Homology CDS 22336 23532 . - 0 ID=cds-WP_059703220.1;Parent=gene-LDO45_RS21910;Dbxref=GenBank:WP_059703220.1;Name=WP_059703220.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546412.1;locus_tag=LDO45_RS21910;product=flagellar basal body P-ring protein FlgI;protein_id=WP_059703220.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 23538 24227 . - . ID=gene-LDO45_RS21915;Name=flgH;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=LDO45_RS21915;old_locus_tag=BDI4_460025 NZ_CAJZAS010000201.1 Protein Homology CDS 23538 24227 . - 0 ID=cds-WP_059535093.1;Parent=gene-LDO45_RS21915;Dbxref=GenBank:WP_059535093.1;Name=WP_059535093.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;gene=flgH;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495504.1;locus_tag=LDO45_RS21915;product=flagellar basal body L-ring protein FlgH;protein_id=WP_059535093.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 24249 25037 . - . ID=gene-LDO45_RS21920;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=LDO45_RS21920;old_locus_tag=BDI4_460026 NZ_CAJZAS010000201.1 Protein Homology CDS 24249 25037 . - 0 ID=cds-WP_014895799.1;Parent=gene-LDO45_RS21920;Dbxref=GenBank:WP_014895799.1;Name=WP_014895799.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895799.1;locus_tag=LDO45_RS21920;product=flagellar basal-body rod protein FlgG;protein_id=WP_014895799.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 25073 25831 . - . ID=gene-LDO45_RS21925;Name=flgF;gbkey=Gene;gene=flgF;gene_biotype=protein_coding;locus_tag=LDO45_RS21925;old_locus_tag=BDI4_460027 NZ_CAJZAS010000201.1 Protein Homology CDS 25073 25831 . - 0 ID=cds-WP_059691964.1;Parent=gene-LDO45_RS21925;Dbxref=GenBank:WP_059691964.1;Name=WP_059691964.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgF;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010112969.1;locus_tag=LDO45_RS21925;product=flagellar basal-body rod protein FlgF;protein_id=WP_059691964.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 25852 27093 . - . ID=gene-LDO45_RS21930;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=LDO45_RS21930;old_locus_tag=BDI4_460028 NZ_CAJZAS010000201.1 Protein Homology CDS 25852 27093 . - 0 ID=cds-WP_223963656.1;Parent=gene-LDO45_RS21930;Dbxref=GenBank:WP_223963656.1;Name=WP_223963656.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763175.1;locus_tag=LDO45_RS21930;product=flagellar hook protein FlgE;protein_id=WP_223963656.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 27122 27868 . - . ID=gene-LDO45_RS21935;Name=LDO45_RS21935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21935;old_locus_tag=BDI4_460029 NZ_CAJZAS010000201.1 Protein Homology CDS 27122 27868 . - 0 ID=cds-WP_059535087.1;Parent=gene-LDO45_RS21935;Dbxref=GenBank:WP_059535087.1;Name=WP_059535087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895796.1;locus_tag=LDO45_RS21935;product=flagellar hook assembly protein FlgD;protein_id=WP_059535087.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 27936 28361 . - . ID=gene-LDO45_RS21940;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=LDO45_RS21940;old_locus_tag=BDI4_460030 NZ_CAJZAS010000201.1 Protein Homology CDS 27936 28361 . - 0 ID=cds-WP_059535085.1;Parent=gene-LDO45_RS21940;Dbxref=GenBank:WP_059535085.1;Name=WP_059535085.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402757.1;locus_tag=LDO45_RS21940;product=flagellar basal body rod protein FlgC;protein_id=WP_059535085.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 28396 28884 . - . ID=gene-LDO45_RS21945;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=LDO45_RS21945;old_locus_tag=BDI4_460031 NZ_CAJZAS010000201.1 Protein Homology CDS 28396 28884 . - 0 ID=cds-WP_059448497.1;Parent=gene-LDO45_RS21945;Dbxref=GenBank:WP_059448497.1;Name=WP_059448497.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329388.1;locus_tag=LDO45_RS21945;product=flagellar basal body rod protein FlgB;protein_id=WP_059448497.1;transl_table=11 NZ_CAJZAS010000201.1 RefSeq gene 29091 29995 . + . ID=gene-LDO45_RS21950;Name=LDO45_RS21950;end_range=29995,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21950;partial=true NZ_CAJZAS010000201.1 Protein Homology CDS 29091 29995 . + 0 ID=cds-WP_223963658.1;Parent=gene-LDO45_RS21950;Dbxref=GenBank:WP_223963658.1;Name=WP_223963658.1;end_range=29995,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723815.1;locus_tag=LDO45_RS21950;partial=true;product=flagellar biosynthesis protein FlgA;protein_id=WP_223963658.1;transl_table=11 ##sequence-region NZ_CAJZAS010000202.1 1 33221 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000202.1 RefSeq region 1 33221 . + . ID=NZ_CAJZAS010000202.1:1..33221;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_47 NZ_CAJZAS010000202.1 RefSeq gene 1 316 . - . ID=gene-LDO45_RS21955;Name=LDO45_RS21955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21955;partial=true;start_range=.,1 NZ_CAJZAS010000202.1 Protein Homology CDS 1 316 . - 0 ID=cds-WP_223963664.1;Parent=gene-LDO45_RS21955;Dbxref=GenBank:WP_223963664.1;Name=WP_223963664.1;Ontology_term=GO:0018580;gbkey=CDS;go_function=nitronate monooxygenase activity|0018580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546697.1;locus_tag=LDO45_RS21955;partial=true;product=nitronate monooxygenase;protein_id=WP_223963664.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 587 1279 . + . ID=gene-LDO45_RS21960;Name=LDO45_RS21960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21960;old_locus_tag=BDI4_470002 NZ_CAJZAS010000202.1 Protein Homology CDS 587 1279 . + 0 ID=cds-WP_059699668.1;Parent=gene-LDO45_RS21960;Dbxref=GenBank:WP_059699668.1;Name=WP_059699668.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760810.1;locus_tag=LDO45_RS21960;product=dienelactone hydrolase family protein;protein_id=WP_059699668.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 1361 2839 . + . ID=gene-LDO45_RS21965;Name=LDO45_RS21965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21965;old_locus_tag=BDI4_470003 NZ_CAJZAS010000202.1 Protein Homology CDS 1361 2839 . + 0 ID=cds-WP_223963666.1;Parent=gene-LDO45_RS21965;Dbxref=GenBank:WP_223963666.1;Name=WP_223963666.1;Ontology_term=GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895580.1;locus_tag=LDO45_RS21965;product=amidase;protein_id=WP_223963666.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 2931 3761 . - . ID=gene-LDO45_RS21970;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=LDO45_RS21970;old_locus_tag=BDI4_470004 NZ_CAJZAS010000202.1 Protein Homology CDS 2931 3761 . - 0 ID=cds-WP_059533463.1;Parent=gene-LDO45_RS21970;Dbxref=GenBank:WP_059533463.1;Name=WP_059533463.1;Ontology_term=GO:0009086,GO:0004489,GO:0005829;gbkey=CDS;gene=metF;go_component=cytosol|0005829||IEA;go_function=methylenetetrahydrofolate reductase (NAD(P)H) activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762887.1;locus_tag=LDO45_RS21970;product=methylenetetrahydrofolate reductase [NAD(P)H];protein_id=WP_059533463.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 3786 4139 . - . ID=gene-LDO45_RS21975;Name=LDO45_RS21975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21975;old_locus_tag=BDI4_470005 NZ_CAJZAS010000202.1 Protein Homology CDS 3786 4139 . - 0 ID=cds-WP_006477367.1;Parent=gene-LDO45_RS21975;Dbxref=GenBank:WP_006477367.1;Name=WP_006477367.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906537.1;locus_tag=LDO45_RS21975;product=phage holin family protein;protein_id=WP_006477367.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 4291 5709 . - . ID=gene-LDO45_RS21980;Name=ahcY;gbkey=Gene;gene=ahcY;gene_biotype=protein_coding;locus_tag=LDO45_RS21980;old_locus_tag=BDI4_470006 NZ_CAJZAS010000202.1 Protein Homology CDS 4291 5709 . - 0 ID=cds-WP_059533465.1;Parent=gene-LDO45_RS21980;Dbxref=GenBank:WP_059533465.1;Name=WP_059533465.1;Ontology_term=GO:0006730,GO:0004013;gbkey=CDS;gene=ahcY;go_function=adenosylhomocysteinase activity|0004013||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401380.1;locus_tag=LDO45_RS21980;product=adenosylhomocysteinase;protein_id=WP_059533465.1;transl_table=11 NZ_CAJZAS010000202.1 cmsearch riboswitch 5744 5860 . - . ID=id-NZ_CAJZAS010000202.1:5744..5860;Dbxref=RFAM:RF01057;Note=S-adenosyl-L-homocysteine riboswitch;bound_moiety=S-adenosyl-L-homocysteine;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAS010000202.1 RefSeq gene 5938 6672 . - . ID=gene-LDO45_RS21985;Name=LDO45_RS21985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21985;old_locus_tag=BDI4_470007 NZ_CAJZAS010000202.1 Protein Homology CDS 5938 6672 . - 0 ID=cds-WP_059452641.1;Parent=gene-LDO45_RS21985;Dbxref=GenBank:WP_059452641.1;Name=WP_059452641.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023809.1;locus_tag=LDO45_RS21985;product=RNA polymerase sigma factor FliA;protein_id=WP_059452641.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 6695 7504 . - . ID=gene-LDO45_RS21990;Name=LDO45_RS21990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS21990;old_locus_tag=BDI4_470008 NZ_CAJZAS010000202.1 Protein Homology CDS 6695 7504 . - 0 ID=cds-WP_059691539.1;Parent=gene-LDO45_RS21990;Dbxref=GenBank:WP_059691539.1;Name=WP_059691539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198637.1;locus_tag=LDO45_RS21990;product=flagellar biosynthesis protein FlhG;protein_id=WP_059691539.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 7497 9248 . - . ID=gene-LDO45_RS21995;Name=flhF;gbkey=Gene;gene=flhF;gene_biotype=protein_coding;locus_tag=LDO45_RS21995;old_locus_tag=BDI4_470009 NZ_CAJZAS010000202.1 Protein Homology CDS 7497 9248 . - 0 ID=cds-WP_223963668.1;Parent=gene-LDO45_RS21995;Dbxref=GenBank:WP_223963668.1;Name=WP_223963668.1;Ontology_term=GO:0044781,GO:0003924,GO:0005525;gbkey=CDS;gene=flhF;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546704.1;locus_tag=LDO45_RS21995;product=flagellar biosynthesis protein FlhF;protein_id=WP_223963668.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 9245 11347 . - . ID=gene-LDO45_RS22000;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=LDO45_RS22000;old_locus_tag=BDI4_470010 NZ_CAJZAS010000202.1 Protein Homology CDS 9245 11347 . - 0 ID=cds-WP_059533471.1;Parent=gene-LDO45_RS22000;Dbxref=GenBank:WP_059533471.1;Name=WP_059533471.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602362.1;locus_tag=LDO45_RS22000;product=flagellar biosynthesis protein FlhA;protein_id=WP_059533471.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 11344 12543 . - . ID=gene-LDO45_RS22005;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=LDO45_RS22005;old_locus_tag=BDI4_470011 NZ_CAJZAS010000202.1 Protein Homology CDS 11344 12543 . - 0 ID=cds-WP_059533473.1;Parent=gene-LDO45_RS22005;Dbxref=GenBank:WP_059533473.1;Name=WP_059533473.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761747.1;locus_tag=LDO45_RS22005;product=flagellar biosynthesis protein FlhB;protein_id=WP_059533473.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 12849 13430 . - . ID=gene-LDO45_RS22010;Name=LDO45_RS22010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22010;old_locus_tag=BDI4_470013 NZ_CAJZAS010000202.1 Protein Homology CDS 12849 13430 . - 0 ID=cds-WP_223963670.1;Parent=gene-LDO45_RS22010;Dbxref=GenBank:WP_223963670.1;Name=WP_223963670.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: protein motif:HMM:NF017470.5;locus_tag=LDO45_RS22010;product=DUF805 domain-containing protein;protein_id=WP_223963670.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 13592 14089 . - . ID=gene-LDO45_RS22015;Name=LDO45_RS22015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22015;old_locus_tag=BDI4_470015 NZ_CAJZAS010000202.1 Protein Homology CDS 13592 14089 . - 0 ID=cds-WP_223963672.1;Parent=gene-LDO45_RS22015;Dbxref=GenBank:WP_223963672.1;Name=WP_223963672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198641.1;locus_tag=LDO45_RS22015;product=VOC family protein;protein_id=WP_223963672.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 14257 15507 . - . ID=gene-LDO45_RS22020;Name=LDO45_RS22020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22020;old_locus_tag=BDI4_470016 NZ_CAJZAS010000202.1 Protein Homology CDS 14257 15507 . - 0 ID=cds-WP_059533478.1;Parent=gene-LDO45_RS22020;Dbxref=GenBank:WP_059533478.1;Name=WP_059533478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212518.1;locus_tag=LDO45_RS22020;product=DUF3443 domain-containing protein;protein_id=WP_059533478.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 15524 16027 . - . ID=gene-LDO45_RS22025;Name=LDO45_RS22025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22025;old_locus_tag=BDI4_470017 NZ_CAJZAS010000202.1 Protein Homology CDS 15524 16027 . - 0 ID=cds-WP_223963674.1;Parent=gene-LDO45_RS22025;Dbxref=GenBank:WP_223963674.1;Name=WP_223963674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546708.1;locus_tag=LDO45_RS22025;product=DUF2844 domain-containing protein;protein_id=WP_223963674.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 16307 17038 . - . ID=gene-LDO45_RS22030;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=LDO45_RS22030;old_locus_tag=BDI4_470018 NZ_CAJZAS010000202.1 Protein Homology CDS 16307 17038 . - 0 ID=cds-WP_059533481.1;Parent=gene-LDO45_RS22030;Dbxref=GenBank:WP_059533481.1;Name=WP_059533481.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350602.1;locus_tag=LDO45_RS22030;product=protein phosphatase CheZ;protein_id=WP_059533481.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 17040 17435 . - . ID=gene-LDO45_RS22035;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=LDO45_RS22035;old_locus_tag=BDI4_470019 NZ_CAJZAS010000202.1 Protein Homology CDS 17040 17435 . - 0 ID=cds-WP_006754880.1;Parent=gene-LDO45_RS22035;Dbxref=GenBank:WP_006754880.1;Name=WP_006754880.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754880.1;locus_tag=LDO45_RS22035;product=chemotaxis response regulator CheY;protein_id=WP_006754880.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 17503 18594 . - . ID=gene-LDO45_RS22040;Name=LDO45_RS22040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22040;old_locus_tag=BDI4_470020 NZ_CAJZAS010000202.1 Protein Homology CDS 17503 18594 . - 0 ID=cds-WP_059601922.1;Parent=gene-LDO45_RS22040;Dbxref=GenBank:WP_059601922.1;Name=WP_059601922.1;Ontology_term=GO:0006482,GO:0006935,GO:0018277,GO:0000156,GO:0008984,GO:0050568,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphorelay response regulator activity|0000156||IEA,protein-glutamate methylesterase activity|0008984||IEA,protein-glutamine glutaminase activity|0050568||IEA;go_process=protein demethylation|0006482||IEA,chemotaxis|0006935||IEA,protein deamination|0018277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895566.1;locus_tag=LDO45_RS22040;product=chemotaxis response regulator protein-glutamate methylesterase;protein_id=WP_059601922.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 18591 19337 . - . ID=gene-LDO45_RS22045;Name=cheD;gbkey=Gene;gene=cheD;gene_biotype=protein_coding;locus_tag=LDO45_RS22045;old_locus_tag=BDI4_470021 NZ_CAJZAS010000202.1 Protein Homology CDS 18591 19337 . - 0 ID=cds-WP_223963676.1;Parent=gene-LDO45_RS22045;Dbxref=GenBank:WP_223963676.1;Name=WP_223963676.1;gbkey=CDS;gene=cheD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694091.1;locus_tag=LDO45_RS22045;product=chemoreceptor glutamine deamidase CheD;protein_id=WP_223963676.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 19334 20317 . - . ID=gene-LDO45_RS22050;Name=LDO45_RS22050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22050;old_locus_tag=BDI4_470022 NZ_CAJZAS010000202.1 Protein Homology CDS 19334 20317 . - 0 ID=cds-WP_059533487.1;Parent=gene-LDO45_RS22050;Dbxref=GenBank:WP_059533487.1;Name=WP_059533487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401392.1;locus_tag=LDO45_RS22050;product=CheR family methyltransferase;protein_id=WP_059533487.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 20321 22267 . - . ID=gene-LDO45_RS22055;Name=LDO45_RS22055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22055;old_locus_tag=BDI4_470023 NZ_CAJZAS010000202.1 Protein Homology CDS 20321 22267 . - 0 ID=cds-WP_223963678.1;Parent=gene-LDO45_RS22055;Dbxref=GenBank:WP_223963678.1;Name=WP_223963678.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212513.1;locus_tag=LDO45_RS22055;product=methyl-accepting chemotaxis protein;protein_id=WP_223963678.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 22305 22820 . - . ID=gene-LDO45_RS22060;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=LDO45_RS22060;old_locus_tag=BDI4_470024 NZ_CAJZAS010000202.1 Protein Homology CDS 22305 22820 . - 0 ID=cds-WP_031397017.1;Parent=gene-LDO45_RS22060;Dbxref=GenBank:WP_031397017.1;Name=WP_031397017.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486165.1;locus_tag=LDO45_RS22060;product=chemotaxis protein CheW;protein_id=WP_031397017.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 22869 25106 . - . ID=gene-LDO45_RS22065;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=LDO45_RS22065;old_locus_tag=BDI4_470025 NZ_CAJZAS010000202.1 Protein Homology CDS 22869 25106 . - 0 ID=cds-WP_223963680.1;Parent=gene-LDO45_RS22065;Dbxref=GenBank:WP_223963680.1;Name=WP_223963680.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546713.1;locus_tag=LDO45_RS22065;product=chemotaxis protein CheA;protein_id=WP_223963680.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 25140 25517 . - . ID=gene-LDO45_RS22070;Name=LDO45_RS22070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22070;old_locus_tag=BDI4_470026 NZ_CAJZAS010000202.1 Protein Homology CDS 25140 25517 . - 0 ID=cds-WP_059533493.1;Parent=gene-LDO45_RS22070;Dbxref=GenBank:WP_059533493.1;Name=WP_059533493.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482646.1;locus_tag=LDO45_RS22070;product=response regulator;protein_id=WP_059533493.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 25542 26561 . - . ID=gene-LDO45_RS22075;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=LDO45_RS22075;old_locus_tag=BDI4_470027 NZ_CAJZAS010000202.1 Protein Homology CDS 25542 26561 . - 0 ID=cds-WP_059533495.1;Parent=gene-LDO45_RS22075;Dbxref=GenBank:WP_059533495.1;Name=WP_059533495.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895557.1;locus_tag=LDO45_RS22075;product=flagellar motor protein MotB;protein_id=WP_059533495.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 26575 27435 . - . ID=gene-LDO45_RS22080;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=LDO45_RS22080;old_locus_tag=BDI4_470028 NZ_CAJZAS010000202.1 Protein Homology CDS 26575 27435 . - 0 ID=cds-WP_059452624.1;Parent=gene-LDO45_RS22080;Dbxref=GenBank:WP_059452624.1;Name=WP_059452624.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013090904.1;locus_tag=LDO45_RS22080;product=flagellar motor stator protein MotA;protein_id=WP_059452624.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 27615 28169 . - . ID=gene-LDO45_RS22085;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=LDO45_RS22085;old_locus_tag=BDI4_470029 NZ_CAJZAS010000202.1 Protein Homology CDS 27615 28169 . - 0 ID=cds-WP_059452623.1;Parent=gene-LDO45_RS22085;Dbxref=GenBank:WP_059452623.1;Name=WP_059452623.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760462.1;locus_tag=LDO45_RS22085;product=flagellar transcriptional regulator FlhC;protein_id=WP_059452623.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 28263 28583 . - . ID=gene-LDO45_RS22090;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=LDO45_RS22090;old_locus_tag=BDI4_470030 NZ_CAJZAS010000202.1 Protein Homology CDS 28263 28583 . - 0 ID=cds-WP_014895554.1;Parent=gene-LDO45_RS22090;Dbxref=GenBank:WP_014895554.1;Name=WP_014895554.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198199.1;locus_tag=LDO45_RS22090;product=flagellar transcriptional regulator FlhD;protein_id=WP_014895554.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 28623 29018 . + . ID=gene-LDO45_RS22095;Name=LDO45_RS22095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22095 NZ_CAJZAS010000202.1 GeneMarkS-2+ CDS 28623 29018 . + 0 ID=cds-WP_156437106.1;Parent=gene-LDO45_RS22095;Dbxref=GenBank:WP_156437106.1;Name=WP_156437106.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS22095;product=hypothetical protein;protein_id=WP_156437106.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 29250 30314 . + . ID=gene-LDO45_RS22100;Name=LDO45_RS22100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22100;old_locus_tag=BDI4_470032 NZ_CAJZAS010000202.1 Protein Homology CDS 29250 30314 . + 0 ID=cds-WP_059533497.1;Parent=gene-LDO45_RS22100;Dbxref=GenBank:WP_059533497.1;Name=WP_059533497.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415729.1;locus_tag=LDO45_RS22100;product=glycosyltransferase family 4 protein;protein_id=WP_059533497.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 30425 30721 . - . ID=gene-LDO45_RS22105;Name=LDO45_RS22105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22105;old_locus_tag=BDI4_470033 NZ_CAJZAS010000202.1 Protein Homology CDS 30425 30721 . - 0 ID=cds-WP_059533499.1;Parent=gene-LDO45_RS22105;Dbxref=GenBank:WP_059533499.1;Name=WP_059533499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762906.1;locus_tag=LDO45_RS22105;product=H-NS histone family protein;protein_id=WP_059533499.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 31019 31759 . + . ID=gene-LDO45_RS22110;Name=aqpZ;gbkey=Gene;gene=aqpZ;gene_biotype=protein_coding;locus_tag=LDO45_RS22110;old_locus_tag=BDI4_470034 NZ_CAJZAS010000202.1 Protein Homology CDS 31019 31759 . + 0 ID=cds-WP_223963682.1;Parent=gene-LDO45_RS22110;Dbxref=GenBank:WP_223963682.1;Name=WP_223963682.1;Ontology_term=GO:0006833,GO:0015250;gbkey=CDS;gene=aqpZ;go_function=water channel activity|0015250||IEA;go_process=water transport|0006833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477345.1;locus_tag=LDO45_RS22110;product=aquaporin Z;protein_id=WP_223963682.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq gene 31865 32698 . - . ID=gene-LDO45_RS22115;Name=LDO45_RS22115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22115;old_locus_tag=BDI4_470035 NZ_CAJZAS010000202.1 Protein Homology CDS 31865 32698 . - 0 ID=cds-WP_059699644.1;Parent=gene-LDO45_RS22115;Dbxref=GenBank:WP_059699644.1;Name=WP_059699644.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895550.1;locus_tag=LDO45_RS22115;product=Cof-type HAD-IIB family hydrolase;protein_id=WP_059699644.1;transl_table=11 NZ_CAJZAS010000202.1 RefSeq pseudogene 32854 33221 . - . ID=gene-LDO45_RS22120;Name=LDO45_RS22120;end_range=33221,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS22120;old_locus_tag=BDI4_470036;partial=true;pseudo=true NZ_CAJZAS010000202.1 Protein Homology CDS 32854 33221 . - 2 ID=cds-LDO45_RS22120;Parent=gene-LDO45_RS22120;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=33221,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760457.1;locus_tag=LDO45_RS22120;partial=true;product=ATPase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000203.1 1 18169 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000203.1 RefSeq region 1 18169 . + . ID=NZ_CAJZAS010000203.1:1..18169;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_48 NZ_CAJZAS010000203.1 RefSeq gene 1 2518 . - . ID=gene-LDO45_RS22125;Name=LDO45_RS22125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22125;partial=true;start_range=.,1 NZ_CAJZAS010000203.1 Protein Homology CDS 1 2518 . - 0 ID=cds-WP_223963685.1;Parent=gene-LDO45_RS22125;Dbxref=GenBank:WP_223963685.1;Name=WP_223963685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724813.1;locus_tag=LDO45_RS22125;partial=true;product=molybdopterin oxidoreductase family protein;protein_id=WP_223963685.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000203.1 RefSeq gene 2536 2883 . - . ID=gene-LDO45_RS22130;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=LDO45_RS22130;old_locus_tag=BDI4_480002 NZ_CAJZAS010000203.1 Protein Homology CDS 2536 2883 . - 0 ID=cds-WP_223963687.1;Parent=gene-LDO45_RS22130;Dbxref=GenBank:WP_223963687.1;Name=WP_223963687.1;Ontology_term=GO:0008942,GO:0051537;gbkey=CDS;gene=nirD;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396957.1;locus_tag=LDO45_RS22130;product=nitrite reductase small subunit NirD;protein_id=WP_223963687.1;transl_table=11 NZ_CAJZAS010000203.1 RefSeq gene 2922 5495 . - . ID=gene-LDO45_RS22135;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=LDO45_RS22135;old_locus_tag=BDI4_480003 NZ_CAJZAS010000203.1 Protein Homology CDS 2922 5495 . - 0 ID=cds-WP_223963688.1;Parent=gene-LDO45_RS22135;Dbxref=GenBank:WP_223963688.1;Name=WP_223963688.1;Ontology_term=GO:0042128,GO:0008942,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882321.1;locus_tag=LDO45_RS22135;product=nitrite reductase large subunit NirB;protein_id=WP_223963688.1;transl_table=11 NZ_CAJZAS010000203.1 RefSeq gene 5517 6842 . - . ID=gene-LDO45_RS22140;Name=LDO45_RS22140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22140;old_locus_tag=BDI4_480004 NZ_CAJZAS010000203.1 Protein Homology CDS 5517 6842 . - 0 ID=cds-WP_223963689.1;Parent=gene-LDO45_RS22140;Dbxref=GenBank:WP_223963689.1;Name=WP_223963689.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494732.1;locus_tag=LDO45_RS22140;product=MFS transporter;protein_id=WP_223963689.1;transl_table=11 NZ_CAJZAS010000203.1 RefSeq gene 7509 8270 . + . ID=gene-LDO45_RS22145;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=LDO45_RS22145;old_locus_tag=BDI4_480006 NZ_CAJZAS010000203.1 Protein Homology CDS 7509 8270 . + 0 ID=cds-WP_223963690.1;Parent=gene-LDO45_RS22145;Dbxref=GenBank:WP_223963690.1;Name=WP_223963690.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488745.1;locus_tag=LDO45_RS22145;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_223963690.1;transl_table=11 NZ_CAJZAS010000203.1 RefSeq gene 8427 9023 . + . ID=gene-LDO45_RS22150;Name=LDO45_RS22150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22150;old_locus_tag=BDI4_480007 NZ_CAJZAS010000203.1 Protein Homology CDS 8427 9023 . + 0 ID=cds-WP_059537542.1;Parent=gene-LDO45_RS22150;Dbxref=GenBank:WP_059537542.1;Name=WP_059537542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756002.1;locus_tag=LDO45_RS22150;product=ANTAR domain-containing response regulator;protein_id=WP_059537542.1;transl_table=11 NZ_CAJZAS010000203.1 RefSeq gene 9029 10072 . + . ID=gene-LDO45_RS22155;Name=LDO45_RS22155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22155;old_locus_tag=BDI4_480008 NZ_CAJZAS010000203.1 Protein Homology CDS 9029 10072 . + 0 ID=cds-WP_059819675.1;Parent=gene-LDO45_RS22155;Dbxref=GenBank:WP_059819675.1;Name=WP_059819675.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882326.1;locus_tag=LDO45_RS22155;product=CmpA/NrtA family ABC transporter substrate-binding protein;protein_id=WP_059819675.1;transl_table=11 NZ_CAJZAS010000203.1 RefSeq gene 10218 10817 . + . ID=gene-LDO45_RS22160;Name=LDO45_RS22160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22160;old_locus_tag=BDI4_480009 NZ_CAJZAS010000203.1 Protein Homology CDS 10218 10817 . + 0 ID=cds-WP_223963691.1;Parent=gene-LDO45_RS22160;Dbxref=GenBank:WP_223963691.1;Name=WP_223963691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366171.1;locus_tag=LDO45_RS22160;product=uracil-DNA glycosylase family protein;protein_id=WP_223963691.1;transl_table=11 NZ_CAJZAS010000203.1 RefSeq gene 10850 11635 . + . ID=gene-LDO45_RS22165;Name=LDO45_RS22165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22165;old_locus_tag=BDI4_480010 NZ_CAJZAS010000203.1 Protein Homology CDS 10850 11635 . + 0 ID=cds-WP_223963692.1;Parent=gene-LDO45_RS22165;Dbxref=GenBank:WP_223963692.1;Name=WP_223963692.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366172.1;locus_tag=LDO45_RS22165;product=YkgJ family cysteine cluster protein;protein_id=WP_223963692.1;transl_table=11 NZ_CAJZAS010000203.1 RefSeq gene 11762 12703 . + . ID=gene-LDO45_RS22170;Name=LDO45_RS22170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22170;old_locus_tag=BDI4_480011 NZ_CAJZAS010000203.1 Protein Homology CDS 11762 12703 . + 0 ID=cds-WP_223963693.1;Parent=gene-LDO45_RS22170;Dbxref=GenBank:WP_223963693.1;Name=WP_223963693.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483777.1;locus_tag=LDO45_RS22170;product=helix-turn-helix transcriptional regulator;protein_id=WP_223963693.1;transl_table=11 NZ_CAJZAS010000203.1 RefSeq gene 12833 13531 . + . ID=gene-LDO45_RS22175;Name=LDO45_RS22175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22175;old_locus_tag=BDI4_480012 NZ_CAJZAS010000203.1 Protein Homology CDS 12833 13531 . + 0 ID=cds-WP_223963695.1;Parent=gene-LDO45_RS22175;Dbxref=GenBank:WP_223963695.1;Name=WP_223963695.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483786.1;locus_tag=LDO45_RS22175;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_223963695.1;transl_table=11 NZ_CAJZAS010000203.1 RefSeq gene 13680 14891 . - . ID=gene-LDO45_RS22180;Name=LDO45_RS22180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22180;old_locus_tag=BDI4_480013 NZ_CAJZAS010000203.1 Protein Homology CDS 13680 14891 . - 0 ID=cds-WP_223963697.1;Parent=gene-LDO45_RS22180;Dbxref=GenBank:WP_223963697.1;Name=WP_223963697.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754771.1;locus_tag=LDO45_RS22180;product=MFS transporter;protein_id=WP_223963697.1;transl_table=11 NZ_CAJZAS010000203.1 RefSeq gene 15130 16107 . - . ID=gene-LDO45_RS22185;Name=LDO45_RS22185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22185;old_locus_tag=BDI4_480015 NZ_CAJZAS010000203.1 GeneMarkS-2+ CDS 15130 16107 . - 0 ID=cds-WP_223963699.1;Parent=gene-LDO45_RS22185;Dbxref=GenBank:WP_223963699.1;Name=WP_223963699.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS22185;product=hypothetical protein;protein_id=WP_223963699.1;transl_table=11 NZ_CAJZAS010000203.1 RefSeq gene 16194 16715 . + . ID=gene-LDO45_RS22190;Name=LDO45_RS22190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22190;old_locus_tag=BDI4_480016 NZ_CAJZAS010000203.1 GeneMarkS-2+ CDS 16194 16715 . + 0 ID=cds-WP_223963701.1;Parent=gene-LDO45_RS22190;Dbxref=GenBank:WP_223963701.1;Name=WP_223963701.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS22190;product=hypothetical protein;protein_id=WP_223963701.1;transl_table=11 NZ_CAJZAS010000203.1 RefSeq gene 16712 16957 . + . ID=gene-LDO45_RS22195;Name=LDO45_RS22195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22195;old_locus_tag=BDI4_480018 NZ_CAJZAS010000203.1 GeneMarkS-2+ CDS 16712 16957 . + 0 ID=cds-WP_223963703.1;Parent=gene-LDO45_RS22195;Dbxref=GenBank:WP_223963703.1;Name=WP_223963703.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS22195;product=hypothetical protein;protein_id=WP_223963703.1;transl_table=11 NZ_CAJZAS010000203.1 RefSeq gene 17277 17705 . - . ID=gene-LDO45_RS22200;Name=LDO45_RS22200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22200;old_locus_tag=BDI4_480019 NZ_CAJZAS010000203.1 Protein Homology CDS 17277 17705 . - 0 ID=cds-WP_223963705.1;Parent=gene-LDO45_RS22200;Dbxref=GenBank:WP_223963705.1;Name=WP_223963705.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013098.5;locus_tag=LDO45_RS22200;product=VOC family protein;protein_id=WP_223963705.1;transl_table=11 NZ_CAJZAS010000203.1 RefSeq gene 17844 18169 . - . ID=gene-LDO45_RS22205;Name=LDO45_RS22205;end_range=18169,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22205;old_locus_tag=BDI4_480020;partial=true NZ_CAJZAS010000203.1 Protein Homology CDS 17844 18169 . - 2 ID=cds-WP_223963707.1;Parent=gene-LDO45_RS22205;Dbxref=GenBank:WP_223963707.1;Name=WP_223963707.1;end_range=18169,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494069.1;locus_tag=LDO45_RS22205;partial=true;product=PDZ domain-containing protein;protein_id=WP_223963707.1;transl_table=11 ##sequence-region NZ_CAJZAS010000204.1 1 33248 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000204.1 RefSeq region 1 33248 . + . ID=NZ_CAJZAS010000204.1:1..33248;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_49 NZ_CAJZAS010000204.1 RefSeq gene 1 1234 . - . ID=gene-LDO45_RS22210;Name=sctD;gbkey=Gene;gene=sctD;gene_biotype=protein_coding;locus_tag=LDO45_RS22210;partial=true;start_range=.,1 NZ_CAJZAS010000204.1 Protein Homology CDS 1 1234 . - 0 ID=cds-WP_223963709.1;Parent=gene-LDO45_RS22210;Dbxref=GenBank:WP_223963709.1;Name=WP_223963709.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctD;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012468009.1;locus_tag=LDO45_RS22210;partial=true;product=type III secretion system inner membrane ring subunit SctD;protein_id=WP_223963709.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 1215 3254 . - . ID=gene-LDO45_RS22215;Name=sctC;gbkey=Gene;gene=sctC;gene_biotype=protein_coding;locus_tag=LDO45_RS22215;old_locus_tag=BDI4_490002 NZ_CAJZAS010000204.1 Protein Homology CDS 1215 3254 . - 0 ID=cds-WP_223963711.1;Parent=gene-LDO45_RS22215;Dbxref=GenBank:WP_223963711.1;Name=WP_223963711.1;Ontology_term=GO:0009306;gbkey=CDS;gene=sctC;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216596.1;locus_tag=LDO45_RS22215;product=type III secretion system outer membrane ring subunit SctC;protein_id=WP_223963711.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 3254 3532 . - . ID=gene-LDO45_RS22220;Name=sctS;gbkey=Gene;gene=sctS;gene_biotype=protein_coding;locus_tag=LDO45_RS22220;old_locus_tag=BDI4_490003 NZ_CAJZAS010000204.1 Protein Homology CDS 3254 3532 . - 0 ID=cds-WP_011659215.1;Parent=gene-LDO45_RS22220;Dbxref=GenBank:WP_011659215.1;Name=WP_011659215.1;Ontology_term=GO:0009306,GO:0030254,GO:0016020;gbkey=CDS;gene=sctS;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA,protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751731.1;locus_tag=LDO45_RS22220;product=type III secretion system export apparatus subunit SctS;protein_id=WP_011659215.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 3529 5742 . - . ID=gene-LDO45_RS22225;Name=sctV;gbkey=Gene;gene=sctV;gene_biotype=protein_coding;locus_tag=LDO45_RS22225;old_locus_tag=BDI4_490004 NZ_CAJZAS010000204.1 Protein Homology CDS 3529 5742 . - 0 ID=cds-WP_059527211.1;Parent=gene-LDO45_RS22225;Dbxref=GenBank:WP_059527211.1;Name=WP_059527211.1;Ontology_term=GO:0015031,GO:0016020;gbkey=CDS;gene=sctV;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366496.1;locus_tag=LDO45_RS22225;product=type III secretion system export apparatus subunit SctV;protein_id=WP_059527211.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 5981 6814 . - . ID=gene-LDO45_RS22230;Name=LDO45_RS22230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22230;old_locus_tag=BDI4_490006 NZ_CAJZAS010000204.1 Protein Homology CDS 5981 6814 . - 0 ID=cds-WP_223963713.1;Parent=gene-LDO45_RS22230;Dbxref=GenBank:WP_223963713.1;Name=WP_223963713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216594.1;locus_tag=LDO45_RS22230;product=autoinducer binding domain-containing protein;protein_id=WP_223963713.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 7095 8000 . + . ID=gene-LDO45_RS22235;Name=LDO45_RS22235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22235;old_locus_tag=BDI4_490007 NZ_CAJZAS010000204.1 Protein Homology CDS 7095 8000 . + 0 ID=cds-WP_223963715.1;Parent=gene-LDO45_RS22235;Dbxref=GenBank:WP_223963715.1;Name=WP_223963715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354463.1;locus_tag=LDO45_RS22235;product=LuxR family transcriptional regulator;protein_id=WP_223963715.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 8086 9732 . - . ID=gene-LDO45_RS22240;Name=LDO45_RS22240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22240;old_locus_tag=BDI4_490008 NZ_CAJZAS010000204.1 Protein Homology CDS 8086 9732 . - 0 ID=cds-WP_223963717.1;Parent=gene-LDO45_RS22240;Dbxref=GenBank:WP_223963717.1;Name=WP_223963717.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498988.1;locus_tag=LDO45_RS22240;product=Nramp family divalent metal transporter;protein_id=WP_223963717.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 9838 9975 . - . ID=gene-LDO45_RS22245;Name=LDO45_RS22245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22245;old_locus_tag=BDI4_490009 NZ_CAJZAS010000204.1 Protein Homology CDS 9838 9975 . - 0 ID=cds-WP_165765561.1;Parent=gene-LDO45_RS22245;Dbxref=GenBank:WP_165765561.1;Name=WP_165765561.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396574.1;locus_tag=LDO45_RS22245;product=hypothetical protein;protein_id=WP_165765561.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 11044 11313 . + . ID=gene-LDO45_RS22250;Name=LDO45_RS22250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22250;old_locus_tag=BDI4_490012 NZ_CAJZAS010000204.1 Protein Homology CDS 11044 11313 . + 0 ID=cds-WP_223963719.1;Parent=gene-LDO45_RS22250;Dbxref=GenBank:WP_223963719.1;Name=WP_223963719.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487869.1;locus_tag=LDO45_RS22250;product=hypothetical protein;protein_id=WP_223963719.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 11431 12915 . + . ID=gene-LDO45_RS22255;Name=LDO45_RS22255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22255;old_locus_tag=BDI4_490013 NZ_CAJZAS010000204.1 Protein Homology CDS 11431 12915 . + 0 ID=cds-WP_223963721.1;Parent=gene-LDO45_RS22255;Dbxref=GenBank:WP_223963721.1;Name=WP_223963721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498986.1;locus_tag=LDO45_RS22255;product=carbohydrate porin;protein_id=WP_223963721.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 12976 14721 . - . ID=gene-LDO45_RS22260;Name=treA;gbkey=Gene;gene=treA;gene_biotype=protein_coding;locus_tag=LDO45_RS22260;old_locus_tag=BDI4_490014 NZ_CAJZAS010000204.1 Protein Homology CDS 12976 14721 . - 0 ID=cds-WP_223963724.1;Parent=gene-LDO45_RS22260;Dbxref=GenBank:WP_223963724.1;Name=WP_223963724.1;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;gene=treA;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760207.1;locus_tag=LDO45_RS22260;product=alpha%2Calpha-trehalase TreA;protein_id=WP_223963724.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 15053 16441 . + . ID=gene-LDO45_RS22265;Name=LDO45_RS22265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22265;old_locus_tag=BDI4_490016 NZ_CAJZAS010000204.1 Protein Homology CDS 15053 16441 . + 0 ID=cds-WP_059819423.1;Parent=gene-LDO45_RS22265;Dbxref=GenBank:WP_059819423.1;Name=WP_059819423.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760208.1;locus_tag=LDO45_RS22265;product=MFS transporter;protein_id=WP_059819423.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 16790 18001 . + . ID=gene-LDO45_RS22270;Name=LDO45_RS22270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22270;old_locus_tag=BDI4_490017 NZ_CAJZAS010000204.1 Protein Homology CDS 16790 18001 . + 0 ID=cds-WP_223963726.1;Parent=gene-LDO45_RS22270;Dbxref=GenBank:WP_223963726.1;Name=WP_223963726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760725.1;locus_tag=LDO45_RS22270;product=winged helix-turn-helix domain-containing protein;protein_id=WP_223963726.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 18077 18295 . - . ID=gene-LDO45_RS22275;Name=LDO45_RS22275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22275;old_locus_tag=BDI4_490018 NZ_CAJZAS010000204.1 Protein Homology CDS 18077 18295 . - 0 ID=cds-WP_006751720.1;Parent=gene-LDO45_RS22275;Dbxref=GenBank:WP_006751720.1;Name=WP_006751720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366505.1;locus_tag=LDO45_RS22275;product=DUF1653 domain-containing protein;protein_id=WP_006751720.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 18351 18794 . - . ID=gene-LDO45_RS22280;Name=LDO45_RS22280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22280;old_locus_tag=BDI4_490019 NZ_CAJZAS010000204.1 Protein Homology CDS 18351 18794 . - 0 ID=cds-WP_223963728.1;Parent=gene-LDO45_RS22280;Dbxref=GenBank:WP_223963728.1;Name=WP_223963728.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760724.1;locus_tag=LDO45_RS22280;product=GNAT family N-acetyltransferase;protein_id=WP_223963728.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 18947 19207 . + . ID=gene-LDO45_RS22285;Name=LDO45_RS22285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22285;old_locus_tag=BDI4_490020 NZ_CAJZAS010000204.1 Protein Homology CDS 18947 19207 . + 0 ID=cds-WP_059526792.1;Parent=gene-LDO45_RS22285;Dbxref=GenBank:WP_059526792.1;Name=WP_059526792.1;Ontology_term=GO:0006355,GO:0045927,GO:0003677,GO:0097351,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=DNA binding|0003677||IEA,toxin sequestering activity|0097351||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,positive regulation of growth|0045927||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366507.1;locus_tag=LDO45_RS22285;product=type II toxin-antitoxin system Phd/YefM family antitoxin;protein_id=WP_059526792.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 19204 19470 . + . ID=gene-LDO45_RS22290;Name=LDO45_RS22290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22290;old_locus_tag=BDI4_490021 NZ_CAJZAS010000204.1 Protein Homology CDS 19204 19470 . + 0 ID=cds-WP_012366508.1;Parent=gene-LDO45_RS22290;Dbxref=GenBank:WP_012366508.1;Name=WP_012366508.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366508.1;locus_tag=LDO45_RS22290;product=Txe/YoeB family addiction module toxin;protein_id=WP_012366508.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 19501 19686 . - . ID=gene-LDO45_RS22295;Name=LDO45_RS22295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22295;old_locus_tag=BDI4_490022 NZ_CAJZAS010000204.1 Protein Homology CDS 19501 19686 . - 0 ID=cds-WP_059526795.1;Parent=gene-LDO45_RS22295;Dbxref=GenBank:WP_059526795.1;Name=WP_059526795.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024712.5;locus_tag=LDO45_RS22295;product=DUF4087 domain-containing protein;protein_id=WP_059526795.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 19762 20385 . + . ID=gene-LDO45_RS22300;Name=LDO45_RS22300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22300;old_locus_tag=BDI4_490023 NZ_CAJZAS010000204.1 Protein Homology CDS 19762 20385 . + 0 ID=cds-WP_223963730.1;Parent=gene-LDO45_RS22300;Dbxref=GenBank:WP_223963730.1;Name=WP_223963730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547273.1;locus_tag=LDO45_RS22300;product=HAD hydrolase-like protein;protein_id=WP_223963730.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 20756 21328 . + . ID=gene-LDO45_RS22305;Name=LDO45_RS22305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22305;old_locus_tag=BDI4_490024 NZ_CAJZAS010000204.1 Protein Homology CDS 20756 21328 . + 0 ID=cds-WP_059526798.1;Parent=gene-LDO45_RS22305;Dbxref=GenBank:WP_059526798.1;Name=WP_059526798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760722.1;locus_tag=LDO45_RS22305;product=DUF4142 domain-containing protein;protein_id=WP_059526798.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 21427 22032 . - . ID=gene-LDO45_RS22310;Name=LDO45_RS22310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22310;old_locus_tag=BDI4_490025 NZ_CAJZAS010000204.1 Protein Homology CDS 21427 22032 . - 0 ID=cds-WP_059692198.1;Parent=gene-LDO45_RS22310;Dbxref=GenBank:WP_059692198.1;Name=WP_059692198.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498978.1;locus_tag=LDO45_RS22310;product=GNAT family N-acetyltransferase;protein_id=WP_059692198.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 22094 23008 . - . ID=gene-LDO45_RS22315;Name=LDO45_RS22315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22315;old_locus_tag=BDI4_490026 NZ_CAJZAS010000204.1 Protein Homology CDS 22094 23008 . - 0 ID=cds-WP_223963732.1;Parent=gene-LDO45_RS22315;Dbxref=GenBank:WP_223963732.1;Name=WP_223963732.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760720.1;locus_tag=LDO45_RS22315;product=LysR family transcriptional regulator;protein_id=WP_223963732.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 23118 24356 . + . ID=gene-LDO45_RS22320;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=LDO45_RS22320;old_locus_tag=BDI4_490027 NZ_CAJZAS010000204.1 Protein Homology CDS 23118 24356 . + 0 ID=cds-WP_059526805.1;Parent=gene-LDO45_RS22320;Dbxref=GenBank:WP_059526805.1;Name=WP_059526805.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760719.1;locus_tag=LDO45_RS22320;product=diaminopimelate decarboxylase;protein_id=WP_059526805.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 24714 25325 . + . ID=gene-LDO45_RS22325;Name=LDO45_RS22325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22325;old_locus_tag=BDI4_490028 NZ_CAJZAS010000204.1 Protein Homology CDS 24714 25325 . + 0 ID=cds-WP_223963734.1;Parent=gene-LDO45_RS22325;Dbxref=GenBank:WP_223963734.1;Name=WP_223963734.1;Ontology_term=GO:0017148,GO:0030598;gbkey=CDS;go_function=rRNA N-glycosylase activity|0030598||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751708.1;locus_tag=LDO45_RS22325;product=ribosome-inactivating family protein;protein_id=WP_223963734.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 25346 25987 . + . ID=gene-LDO45_RS22330;Name=LDO45_RS22330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22330;old_locus_tag=BDI4_490029 NZ_CAJZAS010000204.1 Protein Homology CDS 25346 25987 . + 0 ID=cds-WP_223963736.1;Parent=gene-LDO45_RS22330;Dbxref=GenBank:WP_223963736.1;Name=WP_223963736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366520.1;locus_tag=LDO45_RS22330;product=hypothetical protein;protein_id=WP_223963736.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 26047 27171 . + . ID=gene-LDO45_RS22335;Name=LDO45_RS22335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22335;old_locus_tag=BDI4_490030 NZ_CAJZAS010000204.1 Protein Homology CDS 26047 27171 . + 0 ID=cds-WP_223963738.1;Parent=gene-LDO45_RS22335;Dbxref=GenBank:WP_223963738.1;Name=WP_223963738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366521.1;locus_tag=LDO45_RS22335;product=hypothetical protein;protein_id=WP_223963738.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 27173 28225 . + . ID=gene-LDO45_RS22340;Name=LDO45_RS22340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22340;old_locus_tag=BDI4_490031 NZ_CAJZAS010000204.1 Protein Homology CDS 27173 28225 . + 0 ID=cds-WP_156443183.1;Parent=gene-LDO45_RS22340;Dbxref=GenBank:WP_156443183.1;Name=WP_156443183.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659240.1;locus_tag=LDO45_RS22340;product=hypothetical protein;protein_id=WP_156443183.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 28307 28990 . - . ID=gene-LDO45_RS22345;Name=LDO45_RS22345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22345;old_locus_tag=BDI4_490032 NZ_CAJZAS010000204.1 Protein Homology CDS 28307 28990 . - 0 ID=cds-WP_059526814.1;Parent=gene-LDO45_RS22345;Dbxref=GenBank:WP_059526814.1;Name=WP_059526814.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898755.1;locus_tag=LDO45_RS22345;product=response regulator transcription factor;protein_id=WP_059526814.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 29274 29966 . + . ID=gene-LDO45_RS22350;Name=LDO45_RS22350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22350;old_locus_tag=BDI4_490034 NZ_CAJZAS010000204.1 Protein Homology CDS 29274 29966 . + 0 ID=cds-WP_059526817.1;Parent=gene-LDO45_RS22350;Dbxref=GenBank:WP_059526817.1;Name=WP_059526817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659242.1;locus_tag=LDO45_RS22350;product=DUF2589 domain-containing protein;protein_id=WP_059526817.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 30177 30857 . + . ID=gene-LDO45_RS22355;Name=LDO45_RS22355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22355;old_locus_tag=BDI4_490035 NZ_CAJZAS010000204.1 Protein Homology CDS 30177 30857 . + 0 ID=cds-WP_223963742.1;Parent=gene-LDO45_RS22355;Dbxref=GenBank:WP_223963742.1;Name=WP_223963742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009240907.1;locus_tag=LDO45_RS22355;product=DUF2589 domain-containing protein;protein_id=WP_223963742.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 30841 31287 . + . ID=gene-LDO45_RS22360;Name=LDO45_RS22360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22360;old_locus_tag=BDI4_490036 NZ_CAJZAS010000204.1 Protein Homology CDS 30841 31287 . + 0 ID=cds-WP_059449501.1;Parent=gene-LDO45_RS22360;Dbxref=GenBank:WP_059449501.1;Name=WP_059449501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751360.1;locus_tag=LDO45_RS22360;product=lysozyme;protein_id=WP_059449501.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 31463 32578 . + . ID=gene-LDO45_RS22365;Name=LDO45_RS22365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22365;old_locus_tag=BDI4_490037 NZ_CAJZAS010000204.1 Protein Homology CDS 31463 32578 . + 0 ID=cds-WP_223963744.1;Parent=gene-LDO45_RS22365;Dbxref=GenBank:WP_223963744.1;Name=WP_223963744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366526.1;locus_tag=LDO45_RS22365;product=poly(3-hydroxybutyrate) depolymerase;protein_id=WP_223963744.1;transl_table=11 NZ_CAJZAS010000204.1 RefSeq gene 32634 33176 . + . ID=gene-LDO45_RS22370;Name=LDO45_RS22370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22370;old_locus_tag=BDI4_490038 NZ_CAJZAS010000204.1 Protein Homology CDS 32634 33176 . + 0 ID=cds-WP_223963746.1;Parent=gene-LDO45_RS22370;Dbxref=GenBank:WP_223963746.1;Name=WP_223963746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898749.1;locus_tag=LDO45_RS22370;product=hypothetical protein;protein_id=WP_223963746.1;transl_table=11 ##sequence-region NZ_CAJZAS010000205.1 1 83127 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000205.1 RefSeq region 1 83127 . + . ID=NZ_CAJZAS010000205.1:1..83127;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_5 NZ_CAJZAS010000205.1 RefSeq pseudogene 1 449 . + . ID=gene-LDO45_RS22375;Name=LDO45_RS22375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS22375;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000205.1 Protein Homology CDS 1 449 . + 0 ID=cds-LDO45_RS22375;Parent=gene-LDO45_RS22375;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing N-terminus;Ontology_term=GO:0009245,GO:0005524,GO:0009029;gbkey=CDS;go_function=ATP binding|0005524||IEA,tetraacyldisaccharide 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333983.1;locus_tag=LDO45_RS22375;partial=true;product=tetraacyldisaccharide 4'-kinase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 430 633 . + . ID=gene-LDO45_RS22380;Name=LDO45_RS22380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22380;old_locus_tag=BDI4_50002 NZ_CAJZAS010000205.1 Protein Homology CDS 430 633 . + 0 ID=cds-WP_223963749.1;Parent=gene-LDO45_RS22380;Dbxref=GenBank:WP_223963749.1;Name=WP_223963749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896244.1;locus_tag=LDO45_RS22380;product=Trm112 family protein;protein_id=WP_223963749.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 752 1543 . + . ID=gene-LDO45_RS22385;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=LDO45_RS22385;old_locus_tag=BDI4_50003 NZ_CAJZAS010000205.1 Protein Homology CDS 752 1543 . + 0 ID=cds-WP_059527793.1;Parent=gene-LDO45_RS22385;Dbxref=GenBank:WP_059527793.1;Name=WP_059527793.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102035.1;locus_tag=LDO45_RS22385;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_059527793.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 1752 2414 . + . ID=gene-LDO45_RS22390;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=LDO45_RS22390;old_locus_tag=BDI4_50004 NZ_CAJZAS010000205.1 Protein Homology CDS 1752 2414 . + 0 ID=cds-WP_059690572.1;Parent=gene-LDO45_RS22390;Dbxref=GenBank:WP_059690572.1;Name=WP_059690572.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=adenylate kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398497.1;locus_tag=LDO45_RS22390;product=adenylate kinase;protein_id=WP_059690572.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 2628 3386 . + . ID=gene-LDO45_RS22395;Name=LDO45_RS22395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22395;old_locus_tag=BDI4_50006 NZ_CAJZAS010000205.1 Protein Homology CDS 2628 3386 . + 0 ID=cds-WP_223963751.1;Parent=gene-LDO45_RS22395;Dbxref=GenBank:WP_223963751.1;Name=WP_223963751.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189909.1;locus_tag=LDO45_RS22395;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_223963751.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 3465 4307 . - . ID=gene-LDO45_RS22400;Name=LDO45_RS22400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22400;old_locus_tag=BDI4_50007 NZ_CAJZAS010000205.1 Protein Homology CDS 3465 4307 . - 0 ID=cds-WP_059528320.1;Parent=gene-LDO45_RS22400;Dbxref=GenBank:WP_059528320.1;Name=WP_059528320.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892659.1;locus_tag=LDO45_RS22400;product=SirB1 family protein;protein_id=WP_059528320.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 4316 5866 . - . ID=gene-LDO45_RS22405;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=LDO45_RS22405;old_locus_tag=BDI4_50008 NZ_CAJZAS010000205.1 Protein Homology CDS 4316 5866 . - 0 ID=cds-WP_059527801.1;Parent=gene-LDO45_RS22405;Dbxref=GenBank:WP_059527801.1;Name=WP_059527801.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750940.1;locus_tag=LDO45_RS22405;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_059527801.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 6171 6443 . + . ID=gene-LDO45_RS22410;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=LDO45_RS22410;old_locus_tag=BDI4_50009 NZ_CAJZAS010000205.1 Protein Homology CDS 6171 6443 . + 0 ID=cds-WP_006482211.1;Parent=gene-LDO45_RS22410;Dbxref=GenBank:WP_006482211.1;Name=WP_006482211.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762077.1;locus_tag=LDO45_RS22410;product=30S ribosomal protein S20;protein_id=WP_006482211.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 6597 6917 . - . ID=gene-LDO45_RS22415;Name=LDO45_RS22415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22415;old_locus_tag=BDI4_50010 NZ_CAJZAS010000205.1 Protein Homology CDS 6597 6917 . - 0 ID=cds-WP_006762342.1;Parent=gene-LDO45_RS22415;Dbxref=GenBank:WP_006762342.1;Name=WP_006762342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896238.1;locus_tag=LDO45_RS22415;product=DUF3579 domain-containing protein;protein_id=WP_006762342.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 7331 8260 . + . ID=gene-LDO45_RS22420;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=LDO45_RS22420;old_locus_tag=BDI4_50011 NZ_CAJZAS010000205.1 Protein Homology CDS 7331 8260 . + 0 ID=cds-WP_059511839.1;Parent=gene-LDO45_RS22420;Dbxref=GenBank:WP_059511839.1;Name=WP_059511839.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190177.1;locus_tag=LDO45_RS22420;product=ornithine carbamoyltransferase;protein_id=WP_059511839.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 8380 9429 . - . ID=gene-LDO45_RS22425;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=LDO45_RS22425;old_locus_tag=BDI4_50012 NZ_CAJZAS010000205.1 Protein Homology CDS 8380 9429 . - 0 ID=cds-WP_223963752.1;Parent=gene-LDO45_RS22425;Dbxref=GenBank:WP_223963752.1;Name=WP_223963752.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482213.1;locus_tag=LDO45_RS22425;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_223963752.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 9566 10051 . + . ID=gene-LDO45_RS22430;Name=LDO45_RS22430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22430;old_locus_tag=BDI4_50013 NZ_CAJZAS010000205.1 Protein Homology CDS 9566 10051 . + 0 ID=cds-WP_006762345.1;Parent=gene-LDO45_RS22430;Dbxref=GenBank:WP_006762345.1;Name=WP_006762345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189237.1;locus_tag=LDO45_RS22430;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_006762345.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 10134 10772 . - . ID=gene-LDO45_RS22435;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=LDO45_RS22435;old_locus_tag=BDI4_50014 NZ_CAJZAS010000205.1 Protein Homology CDS 10134 10772 . - 0 ID=cds-WP_059690575.1;Parent=gene-LDO45_RS22435;Dbxref=GenBank:WP_059690575.1;Name=WP_059690575.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657750.1;locus_tag=LDO45_RS22435;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_059690575.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 10955 11446 . - . ID=gene-LDO45_RS22440;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=LDO45_RS22440;old_locus_tag=BDI4_50016 NZ_CAJZAS010000205.1 Protein Homology CDS 10955 11446 . - 0 ID=cds-WP_059527812.1;Parent=gene-LDO45_RS22440;Dbxref=GenBank:WP_059527812.1;Name=WP_059527812.1;Ontology_term=GO:0043039,GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA editing activity|0002161||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189587.1;locus_tag=LDO45_RS22440;product=Cys-tRNA(Pro) deacylase;protein_id=WP_059527812.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 11726 13288 . + . ID=gene-LDO45_RS22445;Name=LDO45_RS22445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22445;old_locus_tag=BDI4_50015 NZ_CAJZAS010000205.1 Protein Homology CDS 11726 13288 . + 0 ID=cds-WP_223963754.1;Parent=gene-LDO45_RS22445;Dbxref=GenBank:WP_223963754.1;Name=WP_223963754.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657752.1;locus_tag=LDO45_RS22445;product=class I adenylate-forming enzyme family protein;protein_id=WP_223963754.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 13326 14294 . - . ID=gene-LDO45_RS22450;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=LDO45_RS22450;old_locus_tag=BDI4_50017 NZ_CAJZAS010000205.1 Protein Homology CDS 13326 14294 . - 0 ID=cds-WP_059701822.1;Parent=gene-LDO45_RS22450;Dbxref=GenBank:WP_059701822.1;Name=WP_059701822.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410310.1;locus_tag=LDO45_RS22450;product=site-specific tyrosine recombinase XerD;protein_id=WP_059701822.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 14294 14761 . - . ID=gene-LDO45_RS22455;Name=LDO45_RS22455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22455;old_locus_tag=BDI4_50018 NZ_CAJZAS010000205.1 Protein Homology CDS 14294 14761 . - 0 ID=cds-WP_059701962.1;Parent=gene-LDO45_RS22455;Dbxref=GenBank:WP_059701962.1;Name=WP_059701962.1;Ontology_term=GO:0003677,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024769.1;locus_tag=LDO45_RS22455;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_059701962.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 14825 16060 . - . ID=gene-LDO45_RS22460;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=LDO45_RS22460;old_locus_tag=BDI4_50019 NZ_CAJZAS010000205.1 Protein Homology CDS 14825 16060 . - 0 ID=cds-WP_059690578.1;Parent=gene-LDO45_RS22460;Dbxref=GenBank:WP_059690578.1;Name=WP_059690578.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,queuosine biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189719.1;locus_tag=LDO45_RS22460;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_059690578.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 16078 16629 . + . ID=gene-LDO45_RS22465;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=LDO45_RS22465;old_locus_tag=BDI4_50020 NZ_CAJZAS010000205.1 Protein Homology CDS 16078 16629 . + 0 ID=cds-WP_059701820.1;Parent=gene-LDO45_RS22465;Dbxref=GenBank:WP_059701820.1;Name=WP_059701820.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492836.1;locus_tag=LDO45_RS22465;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_059701820.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 16611 18137 . + . ID=gene-LDO45_RS22470;Name=LDO45_RS22470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22470;old_locus_tag=BDI4_50021 NZ_CAJZAS010000205.1 Protein Homology CDS 16611 18137 . + 0 ID=cds-WP_223963756.1;Parent=gene-LDO45_RS22470;Dbxref=GenBank:WP_223963756.1;Name=WP_223963756.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885826.1;locus_tag=LDO45_RS22470;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_223963756.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 18183 19061 . - . ID=gene-LDO45_RS22475;Name=LDO45_RS22475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22475;old_locus_tag=BDI4_50022 NZ_CAJZAS010000205.1 Protein Homology CDS 18183 19061 . - 0 ID=cds-WP_223963808.1;Parent=gene-LDO45_RS22475;Dbxref=GenBank:WP_223963808.1;Name=WP_223963808.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467684.1;locus_tag=LDO45_RS22475;product=EamA family transporter;protein_id=WP_223963808.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 19309 20190 . + . ID=gene-LDO45_RS22480;Name=LDO45_RS22480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22480;old_locus_tag=BDI4_50024 NZ_CAJZAS010000205.1 Protein Homology CDS 19309 20190 . + 0 ID=cds-WP_223963758.1;Parent=gene-LDO45_RS22480;Dbxref=GenBank:WP_223963758.1;Name=WP_223963758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329104.1;locus_tag=LDO45_RS22480;product=pirin family protein;protein_id=WP_223963758.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 20243 21091 . + . ID=gene-LDO45_RS22485;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=LDO45_RS22485;old_locus_tag=BDI4_50025 NZ_CAJZAS010000205.1 Protein Homology CDS 20243 21091 . + 0 ID=cds-WP_223963760.1;Parent=gene-LDO45_RS22485;Dbxref=GenBank:WP_223963760.1;Name=WP_223963760.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398476.1;locus_tag=LDO45_RS22485;product=thioredoxin;protein_id=WP_223963760.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 21195 22052 . - . ID=gene-LDO45_RS22490;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=LDO45_RS22490;old_locus_tag=BDI4_50026 NZ_CAJZAS010000205.1 Protein Homology CDS 21195 22052 . - 0 ID=cds-WP_223963762.1;Parent=gene-LDO45_RS22490;Dbxref=GenBank:WP_223963762.1;Name=WP_223963762.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212828.1;locus_tag=LDO45_RS22490;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_223963762.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 22181 22825 . + . ID=gene-LDO45_RS22495;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=LDO45_RS22495;old_locus_tag=BDI4_50027 NZ_CAJZAS010000205.1 Protein Homology CDS 22181 22825 . + 0 ID=cds-WP_223963764.1;Parent=gene-LDO45_RS22495;Dbxref=GenBank:WP_223963764.1;Name=WP_223963764.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012399931.1;locus_tag=LDO45_RS22495;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_223963764.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 22956 24176 . + . ID=gene-LDO45_RS22500;Name=LDO45_RS22500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22500;old_locus_tag=BDI4_50028 NZ_CAJZAS010000205.1 Protein Homology CDS 22956 24176 . + 0 ID=cds-WP_059527843.1;Parent=gene-LDO45_RS22500;Dbxref=GenBank:WP_059527843.1;Name=WP_059527843.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602204.1;locus_tag=LDO45_RS22500;product=cyclopropane-fatty-acyl-phospholipid synthase family protein;protein_id=WP_059527843.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 24200 25516 . + . ID=gene-LDO45_RS22505;Name=LDO45_RS22505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22505;old_locus_tag=BDI4_50029 NZ_CAJZAS010000205.1 Protein Homology CDS 24200 25516 . + 0 ID=cds-WP_223963765.1;Parent=gene-LDO45_RS22505;Dbxref=GenBank:WP_223963765.1;Name=WP_223963765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416332.1;locus_tag=LDO45_RS22505;product=DUF72 domain-containing protein;protein_id=WP_223963765.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 25571 26131 . - . ID=gene-LDO45_RS22510;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=LDO45_RS22510;old_locus_tag=BDI4_50030 NZ_CAJZAS010000205.1 Protein Homology CDS 25571 26131 . - 0 ID=cds-WP_059527848.1;Parent=gene-LDO45_RS22510;Dbxref=GenBank:WP_059527848.1;Name=WP_059527848.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine:thioredoxin-disulfide S-oxidoreductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546062.1;locus_tag=LDO45_RS22510;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_059527848.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 26697 28103 . + . ID=gene-LDO45_RS22515;Name=LDO45_RS22515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22515;old_locus_tag=BDI4_50031 NZ_CAJZAS010000205.1 Protein Homology CDS 26697 28103 . + 0 ID=cds-WP_223963767.1;Parent=gene-LDO45_RS22515;Dbxref=GenBank:WP_223963767.1;Name=WP_223963767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896218.1;locus_tag=LDO45_RS22515;product=selenium-binding family protein;protein_id=WP_223963767.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 28100 28765 . + . ID=gene-LDO45_RS22520;Name=LDO45_RS22520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22520;old_locus_tag=BDI4_50032 NZ_CAJZAS010000205.1 Protein Homology CDS 28100 28765 . + 0 ID=cds-WP_059527854.1;Parent=gene-LDO45_RS22520;Dbxref=GenBank:WP_059527854.1;Name=WP_059527854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477994.1;locus_tag=LDO45_RS22520;product=hypothetical protein;protein_id=WP_059527854.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 29040 29549 . + . ID=gene-LDO45_RS22525;Name=LDO45_RS22525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22525;old_locus_tag=BDI4_50033 NZ_CAJZAS010000205.1 Protein Homology CDS 29040 29549 . + 0 ID=cds-WP_223963769.1;Parent=gene-LDO45_RS22525;Dbxref=GenBank:WP_223963769.1;Name=WP_223963769.1;Ontology_term=GO:0010181,GO:0016646;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on the CH-NH group of donors%2C NAD or NADP as acceptor|0016646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477993.1;locus_tag=LDO45_RS22525;product=flavin reductase family protein;protein_id=WP_223963769.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 29536 30036 . - . ID=gene-LDO45_RS22530;Name=LDO45_RS22530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22530;old_locus_tag=BDI4_50034 NZ_CAJZAS010000205.1 Protein Homology CDS 29536 30036 . - 0 ID=cds-WP_044844460.1;Parent=gene-LDO45_RS22530;Dbxref=GenBank:WP_044844460.1;Name=WP_044844460.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009980145.1;locus_tag=LDO45_RS22530;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_044844460.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 30167 30808 . + . ID=gene-LDO45_RS22535;Name=kynB;gbkey=Gene;gene=kynB;gene_biotype=protein_coding;locus_tag=LDO45_RS22535;old_locus_tag=BDI4_50035 NZ_CAJZAS010000205.1 Protein Homology CDS 30167 30808 . + 0 ID=cds-WP_223963771.1;Parent=gene-LDO45_RS22535;Dbxref=GenBank:WP_223963771.1;Name=WP_223963771.1;Ontology_term=GO:0019441,GO:0004061;gbkey=CDS;gene=kynB;go_function=arylformamidase activity|0004061||IEA;go_process=tryptophan catabolic process to kynurenine|0019441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546066.1;locus_tag=LDO45_RS22535;product=arylformamidase;protein_id=WP_223963771.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 30849 32102 . + . ID=gene-LDO45_RS22540;Name=kynU;gbkey=Gene;gene=kynU;gene_biotype=protein_coding;locus_tag=LDO45_RS22540;old_locus_tag=BDI4_50036 NZ_CAJZAS010000205.1 Protein Homology CDS 30849 32102 . + 0 ID=cds-WP_059527860.1;Parent=gene-LDO45_RS22540;Dbxref=GenBank:WP_059527860.1;Name=WP_059527860.1;Ontology_term=GO:0006569,GO:0009435,GO:0030170,GO:0030429,GO:0005737;gbkey=CDS;gene=kynU;go_component=cytoplasm|0005737||IEA;go_function=pyridoxal phosphate binding|0030170||IEA,kynureninase activity|0030429||IEA;go_process=tryptophan catabolic process|0006569||IEA,NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750965.1;locus_tag=LDO45_RS22540;product=kynureninase;protein_id=WP_059527860.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 32197 33123 . + . ID=gene-LDO45_RS22545;Name=kynA;gbkey=Gene;gene=kynA;gene_biotype=protein_coding;locus_tag=LDO45_RS22545;old_locus_tag=BDI4_50037 NZ_CAJZAS010000205.1 Protein Homology CDS 32197 33123 . + 0 ID=cds-WP_223963810.1;Parent=gene-LDO45_RS22545;Dbxref=GenBank:WP_223963810.1;Name=WP_223963810.1;Ontology_term=GO:0019441,GO:0004833;gbkey=CDS;gene=kynA;go_function=tryptophan 2%2C3-dioxygenase activity|0004833||IEA;go_process=tryptophan catabolic process to kynurenine|0019441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482479.1;locus_tag=LDO45_RS22545;product=tryptophan 2%2C3-dioxygenase;protein_id=WP_223963810.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 33151 34548 . - . ID=gene-LDO45_RS22550;Name=LDO45_RS22550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22550;old_locus_tag=BDI4_50038 NZ_CAJZAS010000205.1 Protein Homology CDS 33151 34548 . - 0 ID=cds-WP_059701960.1;Parent=gene-LDO45_RS22550;Dbxref=GenBank:WP_059701960.1;Name=WP_059701960.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467686.1;locus_tag=LDO45_RS22550;product=MFS transporter;protein_id=WP_059701960.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 34789 35733 . - . ID=gene-LDO45_RS22555;Name=LDO45_RS22555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22555;old_locus_tag=BDI4_50039 NZ_CAJZAS010000205.1 Protein Homology CDS 34789 35733 . - 0 ID=cds-WP_223963773.1;Parent=gene-LDO45_RS22555;Dbxref=GenBank:WP_223963773.1;Name=WP_223963773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761051.1;locus_tag=LDO45_RS22555;product=ketopantoate reductase family protein;protein_id=WP_223963773.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 35747 37198 . - . ID=gene-LDO45_RS22560;Name=LDO45_RS22560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22560;old_locus_tag=BDI4_50040 NZ_CAJZAS010000205.1 Protein Homology CDS 35747 37198 . - 0 ID=cds-WP_223963775.1;Parent=gene-LDO45_RS22560;Dbxref=GenBank:WP_223963775.1;Name=WP_223963775.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896209.1;locus_tag=LDO45_RS22560;product=aldehyde dehydrogenase family protein;protein_id=WP_223963775.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 37228 38844 . - . ID=gene-LDO45_RS22565;Name=mdlC;gbkey=Gene;gene=mdlC;gene_biotype=protein_coding;locus_tag=LDO45_RS22565;old_locus_tag=BDI4_50042 NZ_CAJZAS010000205.1 Protein Homology CDS 37228 38844 . - 0 ID=cds-WP_223963777.1;Parent=gene-LDO45_RS22565;Dbxref=GenBank:WP_223963777.1;Name=WP_223963777.1;Ontology_term=GO:0000287,GO:0030976;gbkey=CDS;gene=mdlC;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364572.1;locus_tag=LDO45_RS22565;product=benzoylformate decarboxylase;protein_id=WP_223963777.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 38944 39855 . + . ID=gene-LDO45_RS22570;Name=LDO45_RS22570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22570;old_locus_tag=BDI4_50041 NZ_CAJZAS010000205.1 Protein Homology CDS 38944 39855 . + 0 ID=cds-WP_059690592.1;Parent=gene-LDO45_RS22570;Dbxref=GenBank:WP_059690592.1;Name=WP_059690592.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485519.1;locus_tag=LDO45_RS22570;product=LysR family transcriptional regulator;protein_id=WP_059690592.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 40032 41426 . + . ID=gene-LDO45_RS22575;Name=dalD;gbkey=Gene;gene=dalD;gene_biotype=protein_coding;locus_tag=LDO45_RS22575;old_locus_tag=BDI4_50043 NZ_CAJZAS010000205.1 Protein Homology CDS 40032 41426 . + 0 ID=cds-WP_059701801.1;Parent=gene-LDO45_RS22575;Dbxref=GenBank:WP_059701801.1;Name=WP_059701801.1;Ontology_term=GO:0051161,GO:0047813;gbkey=CDS;gene=dalD;go_function=D-arabinitol 4-dehydrogenase activity|0047813||IEA;go_process=arabitol metabolic process|0051161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492844.1;locus_tag=LDO45_RS22575;product=D-arabinitol 4-dehydrogenase;protein_id=WP_059701801.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 41553 43034 . + . ID=gene-LDO45_RS22580;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=LDO45_RS22580;old_locus_tag=BDI4_50044 NZ_CAJZAS010000205.1 Protein Homology CDS 41553 43034 . + 0 ID=cds-WP_223963781.1;Parent=gene-LDO45_RS22580;Dbxref=GenBank:WP_223963781.1;Name=WP_223963781.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334025.1;locus_tag=LDO45_RS22580;product=xylulokinase;protein_id=WP_223963781.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 43086 44093 . + . ID=gene-LDO45_RS22585;Name=LDO45_RS22585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22585;old_locus_tag=BDI4_50045 NZ_CAJZAS010000205.1 Protein Homology CDS 43086 44093 . + 0 ID=cds-WP_175911239.1;Parent=gene-LDO45_RS22585;Dbxref=GenBank:WP_175911239.1;Name=WP_175911239.1;Ontology_term=GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896204.1;locus_tag=LDO45_RS22585;product=sugar-binding transcriptional regulator;protein_id=WP_175911239.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 44107 45345 . - . ID=gene-LDO45_RS22590;Name=LDO45_RS22590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22590;old_locus_tag=BDI4_50046 NZ_CAJZAS010000205.1 Protein Homology CDS 44107 45345 . - 0 ID=cds-WP_223963782.1;Parent=gene-LDO45_RS22590;Dbxref=GenBank:WP_223963782.1;Name=WP_223963782.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406458.1;locus_tag=LDO45_RS22590;product=MFS transporter;protein_id=WP_223963782.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 45342 46538 . - . ID=gene-LDO45_RS22595;Name=LDO45_RS22595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22595;old_locus_tag=BDI4_50047 NZ_CAJZAS010000205.1 Protein Homology CDS 45342 46538 . - 0 ID=cds-WP_223963783.1;Parent=gene-LDO45_RS22595;Dbxref=GenBank:WP_223963783.1;Name=WP_223963783.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484676.1;locus_tag=LDO45_RS22595;product=serine hydrolase;protein_id=WP_223963783.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 46652 47536 . + . ID=gene-LDO45_RS22600;Name=LDO45_RS22600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22600;old_locus_tag=BDI4_50048 NZ_CAJZAS010000205.1 Protein Homology CDS 46652 47536 . + 0 ID=cds-WP_223963785.1;Parent=gene-LDO45_RS22600;Dbxref=GenBank:WP_223963785.1;Name=WP_223963785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657782.1;locus_tag=LDO45_RS22600;product=LysR family transcriptional regulator;protein_id=WP_223963785.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 47550 48659 . - . ID=gene-LDO45_RS22605;Name=LDO45_RS22605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22605;old_locus_tag=BDI4_50049 NZ_CAJZAS010000205.1 Protein Homology CDS 47550 48659 . - 0 ID=cds-WP_059528326.1;Parent=gene-LDO45_RS22605;Dbxref=GenBank:WP_059528326.1;Name=WP_059528326.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885872.1;locus_tag=LDO45_RS22605;product=ABC transporter ATP-binding protein;protein_id=WP_059528326.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 48719 49447 . - . ID=gene-LDO45_RS22610;Name=LDO45_RS22610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22610;old_locus_tag=BDI4_50050 NZ_CAJZAS010000205.1 Protein Homology CDS 48719 49447 . - 0 ID=cds-WP_059690597.1;Parent=gene-LDO45_RS22610;Dbxref=GenBank:WP_059690597.1;Name=WP_059690597.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398448.1;locus_tag=LDO45_RS22610;product=HAD family phosphatase;protein_id=WP_059690597.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 49444 50295 . - . ID=gene-LDO45_RS22615;Name=LDO45_RS22615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22615;old_locus_tag=BDI4_50051 NZ_CAJZAS010000205.1 Protein Homology CDS 49444 50295 . - 0 ID=cds-WP_059527895.1;Parent=gene-LDO45_RS22615;Dbxref=GenBank:WP_059527895.1;Name=WP_059527895.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484674.1;locus_tag=LDO45_RS22615;product=carbohydrate ABC transporter permease;protein_id=WP_059527895.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 50292 51239 . - . ID=gene-LDO45_RS22620;Name=LDO45_RS22620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22620;old_locus_tag=BDI4_50052 NZ_CAJZAS010000205.1 Protein Homology CDS 50292 51239 . - 0 ID=cds-WP_059527898.1;Parent=gene-LDO45_RS22620;Dbxref=GenBank:WP_059527898.1;Name=WP_059527898.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896200.1;locus_tag=LDO45_RS22620;product=carbohydrate ABC transporter permease;protein_id=WP_059527898.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 51342 52667 . - . ID=gene-LDO45_RS22625;Name=LDO45_RS22625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22625;old_locus_tag=BDI4_50053 NZ_CAJZAS010000205.1 Protein Homology CDS 51342 52667 . - 0 ID=cds-WP_059527901.1;Parent=gene-LDO45_RS22625;Dbxref=GenBank:WP_059527901.1;Name=WP_059527901.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601633.1;locus_tag=LDO45_RS22625;product=sugar ABC transporter substrate-binding protein;protein_id=WP_059527901.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 52750 54102 . - . ID=gene-LDO45_RS22630;Name=LDO45_RS22630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22630;old_locus_tag=BDI4_50054 NZ_CAJZAS010000205.1 Protein Homology CDS 52750 54102 . - 0 ID=cds-WP_175911251.1;Parent=gene-LDO45_RS22630;Dbxref=GenBank:WP_175911251.1;Name=WP_175911251.1;Ontology_term=GO:0005975;gbkey=CDS;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353037.1;locus_tag=LDO45_RS22630;product=D-tagatose-bisphosphate aldolase%2C class II%2C non-catalytic subunit;protein_id=WP_175911251.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 54090 55046 . - . ID=gene-LDO45_RS22635;Name=LDO45_RS22635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22635;old_locus_tag=BDI4_50055 NZ_CAJZAS010000205.1 Protein Homology CDS 54090 55046 . - 0 ID=cds-WP_223963812.1;Parent=gene-LDO45_RS22635;Dbxref=GenBank:WP_223963812.1;Name=WP_223963812.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522660.1;locus_tag=LDO45_RS22635;product=sugar kinase;protein_id=WP_223963812.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 55119 55895 . - . ID=gene-LDO45_RS22640;Name=LDO45_RS22640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22640;old_locus_tag=BDI4_50056 NZ_CAJZAS010000205.1 Protein Homology CDS 55119 55895 . - 0 ID=cds-WP_223963787.1;Parent=gene-LDO45_RS22640;Dbxref=GenBank:WP_223963787.1;Name=WP_223963787.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876870.1;locus_tag=LDO45_RS22640;product=L-iditol 2-dehydrogenase;protein_id=WP_223963787.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 56224 56685 . + . ID=gene-LDO45_RS22645;Name=LDO45_RS22645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22645;old_locus_tag=BDI4_50058 NZ_CAJZAS010000205.1 Protein Homology CDS 56224 56685 . + 0 ID=cds-WP_059527909.1;Parent=gene-LDO45_RS22645;Dbxref=GenBank:WP_059527909.1;Name=WP_059527909.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896195.1;locus_tag=LDO45_RS22645;product=Fur family transcriptional regulator;protein_id=WP_059527909.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 56734 57648 . + . ID=gene-LDO45_RS22650;Name=LDO45_RS22650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22650;old_locus_tag=BDI4_50059 NZ_CAJZAS010000205.1 Protein Homology CDS 56734 57648 . + 0 ID=cds-WP_059527911.1;Parent=gene-LDO45_RS22650;Dbxref=GenBank:WP_059527911.1;Name=WP_059527911.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754783.1;locus_tag=LDO45_RS22650;product=metal ABC transporter solute-binding protein%2C Zn/Mn family;protein_id=WP_059527911.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 57662 58552 . + . ID=gene-LDO45_RS22655;Name=LDO45_RS22655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22655;old_locus_tag=BDI4_50060 NZ_CAJZAS010000205.1 Protein Homology CDS 57662 58552 . + 0 ID=cds-WP_059527914.1;Parent=gene-LDO45_RS22655;Dbxref=GenBank:WP_059527914.1;Name=WP_059527914.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410050.1;locus_tag=LDO45_RS22655;product=ABC transporter ATP-binding protein;protein_id=WP_059527914.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 58545 59327 . + . ID=gene-LDO45_RS22660;Name=LDO45_RS22660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22660;old_locus_tag=BDI4_50061 NZ_CAJZAS010000205.1 Protein Homology CDS 58545 59327 . + 0 ID=cds-WP_223963789.1;Parent=gene-LDO45_RS22660;Dbxref=GenBank:WP_223963789.1;Name=WP_223963789.1;Ontology_term=GO:0030001,GO:0055085,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412349.1;locus_tag=LDO45_RS22660;product=metal ABC transporter permease;protein_id=WP_223963789.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 59438 60286 . - . ID=gene-LDO45_RS22665;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=LDO45_RS22665;old_locus_tag=BDI4_50062 NZ_CAJZAS010000205.1 Protein Homology CDS 59438 60286 . - 0 ID=cds-WP_223963790.1;Parent=gene-LDO45_RS22665;Dbxref=GenBank:WP_223963790.1;Name=WP_223963790.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723552.1;locus_tag=LDO45_RS22665;product=S-formylglutathione hydrolase;protein_id=WP_223963790.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 60302 60523 . - . ID=gene-LDO45_RS34610;Name=LDO45_RS34610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34610;old_locus_tag=BDI4_50063 NZ_CAJZAS010000205.1 GeneMarkS-2+ CDS 60302 60523 . - 0 ID=cds-WP_374109544.1;Parent=gene-LDO45_RS34610;Dbxref=GenBank:WP_374109544.1;Name=WP_374109544.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34610;product=hypothetical protein;protein_id=WP_374109544.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 60534 61970 . - . ID=gene-LDO45_RS22675;Name=LDO45_RS22675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22675;old_locus_tag=BDI4_50064 NZ_CAJZAS010000205.1 Protein Homology CDS 60534 61970 . - 0 ID=cds-WP_223963792.1;Parent=gene-LDO45_RS22675;Dbxref=GenBank:WP_223963792.1;Name=WP_223963792.1;Ontology_term=GO:0005998,GO:0004856,GO:0005524;gbkey=CDS;go_function=D-xylulokinase activity|0004856||IEA,ATP binding|0005524||IEA;go_process=xylulose catabolic process|0005998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546089.1;locus_tag=LDO45_RS22675;product=xylulokinase;protein_id=WP_223963792.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 62421 63797 . + . ID=gene-LDO45_RS22680;Name=LDO45_RS22680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22680;old_locus_tag=BDI4_50065 NZ_CAJZAS010000205.1 Protein Homology CDS 62421 63797 . + 0 ID=cds-WP_059527937.1;Parent=gene-LDO45_RS22680;Dbxref=GenBank:WP_059527937.1;Name=WP_059527937.1;Ontology_term=GO:0015205;gbkey=CDS;go_function=nucleobase transmembrane transporter activity|0015205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896188.1;locus_tag=LDO45_RS22680;product=nucleobase:cation symporter-2 family protein;protein_id=WP_059527937.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 63791 63979 . - . ID=gene-LDO45_RS22685;Name=LDO45_RS22685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22685 NZ_CAJZAS010000205.1 GeneMarkS-2+ CDS 63791 63979 . - 0 ID=cds-WP_223963794.1;Parent=gene-LDO45_RS22685;Dbxref=GenBank:WP_223963794.1;Name=WP_223963794.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS22685;product=hypothetical protein;protein_id=WP_223963794.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 64066 65589 . - . ID=gene-LDO45_RS22690;Name=LDO45_RS22690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22690;old_locus_tag=BDI4_50066 NZ_CAJZAS010000205.1 Protein Homology CDS 64066 65589 . - 0 ID=cds-WP_059527941.1;Parent=gene-LDO45_RS22690;Dbxref=GenBank:WP_059527941.1;Name=WP_059527941.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212800.1;locus_tag=LDO45_RS22690;product=efflux transporter outer membrane subunit;protein_id=WP_059527941.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 65589 68789 . - . ID=gene-LDO45_RS22695;Name=bpeB;gbkey=Gene;gene=bpeB;gene_biotype=protein_coding;locus_tag=LDO45_RS22695;old_locus_tag=BDI4_50067 NZ_CAJZAS010000205.1 Protein Homology CDS 65589 68789 . - 0 ID=cds-WP_059527945.1;Parent=gene-LDO45_RS22695;Dbxref=GenBank:WP_059527945.1;Name=WP_059527945.1;gbkey=CDS;gene=bpeB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398428.1;locus_tag=LDO45_RS22695;product=efflux RND transporter permease BpeB;protein_id=WP_059527945.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 68805 70082 . - . ID=gene-LDO45_RS22700;Name=LDO45_RS22700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22700;old_locus_tag=BDI4_50068 NZ_CAJZAS010000205.1 Protein Homology CDS 68805 70082 . - 0 ID=cds-WP_059527948.1;Parent=gene-LDO45_RS22700;Dbxref=GenBank:WP_059527948.1;Name=WP_059527948.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197561.1;locus_tag=LDO45_RS22700;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_059527948.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 70481 71122 . + . ID=gene-LDO45_RS22705;Name=LDO45_RS22705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22705;old_locus_tag=BDI4_50069 NZ_CAJZAS010000205.1 Protein Homology CDS 70481 71122 . + 0 ID=cds-WP_059527951.1;Parent=gene-LDO45_RS22705;Dbxref=GenBank:WP_059527951.1;Name=WP_059527951.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896184.1;locus_tag=LDO45_RS22705;product=TetR family transcriptional regulator;protein_id=WP_059527951.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 71242 71895 . - . ID=gene-LDO45_RS22710;Name=LDO45_RS22710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22710;old_locus_tag=BDI4_50070 NZ_CAJZAS010000205.1 Protein Homology CDS 71242 71895 . - 0 ID=cds-WP_059690677.1;Parent=gene-LDO45_RS22710;Dbxref=GenBank:WP_059690677.1;Name=WP_059690677.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657801.1;locus_tag=LDO45_RS22710;product=cysteine hydrolase family protein;protein_id=WP_059690677.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 72048 73049 . + . ID=gene-LDO45_RS22715;Name=LDO45_RS22715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22715;old_locus_tag=BDI4_50071 NZ_CAJZAS010000205.1 Protein Homology CDS 72048 73049 . + 0 ID=cds-WP_223963803.1;Parent=gene-LDO45_RS22715;Dbxref=GenBank:WP_223963803.1;Name=WP_223963803.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364600.1;locus_tag=LDO45_RS22715;product=helix-turn-helix domain-containing protein;protein_id=WP_223963803.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 73102 73812 . - . ID=gene-LDO45_RS22720;Name=LDO45_RS22720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22720;old_locus_tag=BDI4_50072 NZ_CAJZAS010000205.1 Protein Homology CDS 73102 73812 . - 0 ID=cds-WP_059690609.1;Parent=gene-LDO45_RS22720;Dbxref=GenBank:WP_059690609.1;Name=WP_059690609.1;Ontology_term=GO:0005488;gbkey=CDS;go_function=binding|0005488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329146.1;locus_tag=LDO45_RS22720;product=CoxG family protein;protein_id=WP_059690609.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 73841 74200 . - . ID=gene-LDO45_RS22725;Name=LDO45_RS22725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22725;old_locus_tag=BDI4_50073 NZ_CAJZAS010000205.1 Protein Homology CDS 73841 74200 . - 0 ID=cds-WP_059527959.1;Parent=gene-LDO45_RS22725;Dbxref=GenBank:WP_059527959.1;Name=WP_059527959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414694.1;locus_tag=LDO45_RS22725;product=DUF427 domain-containing protein;protein_id=WP_059527959.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 74339 74776 . - . ID=gene-LDO45_RS22730;Name=LDO45_RS22730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22730;old_locus_tag=BDI4_50074 NZ_CAJZAS010000205.1 Protein Homology CDS 74339 74776 . - 0 ID=cds-WP_059527962.1;Parent=gene-LDO45_RS22730;Dbxref=GenBank:WP_059527962.1;Name=WP_059527962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406482.1;locus_tag=LDO45_RS22730;product=carboxypeptidase-like regulatory domain-containing protein;protein_id=WP_059527962.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 74871 76355 . - . ID=gene-LDO45_RS22735;Name=LDO45_RS22735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22735;old_locus_tag=BDI4_50075 NZ_CAJZAS010000205.1 Protein Homology CDS 74871 76355 . - 0 ID=cds-WP_059527965.1;Parent=gene-LDO45_RS22735;Dbxref=GenBank:WP_059527965.1;Name=WP_059527965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398419.1;locus_tag=LDO45_RS22735;product=DegQ family serine endoprotease;protein_id=WP_059527965.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq pseudogene 76421 76639 . - . ID=gene-LDO45_RS34615;Name=LDO45_RS34615;end_range=76639,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34615;old_locus_tag=BDI4_50076;partial=true;pseudo=true NZ_CAJZAS010000205.1 Protein Homology CDS 76421 76639 . - 1 ID=cds-LDO45_RS34615;Parent=gene-LDO45_RS34615;Note=frameshifted%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=76639,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009903129.1;locus_tag=LDO45_RS34615;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 77689 78351 . - . ID=gene-LDO45_RS22745;Name=LDO45_RS22745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22745;old_locus_tag=BDI4_50079 NZ_CAJZAS010000205.1 Protein Homology CDS 77689 78351 . - 0 ID=cds-WP_040141750.1;Parent=gene-LDO45_RS22745;Dbxref=GenBank:WP_040141750.1;Name=WP_040141750.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189255.1;locus_tag=LDO45_RS22745;product=response regulator;protein_id=WP_040141750.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 78535 80067 . + . ID=gene-LDO45_RS22750;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=LDO45_RS22750;old_locus_tag=BDI4_50080 NZ_CAJZAS010000205.1 Protein Homology CDS 78535 80067 . + 0 ID=cds-WP_059527970.1;Parent=gene-LDO45_RS22750;Dbxref=GenBank:WP_059527970.1;Name=WP_059527970.1;Ontology_term=GO:0009252,GO:0004175,GO:0009002;gbkey=CDS;gene=dacB;go_function=endopeptidase activity|0004175||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477951.1;locus_tag=LDO45_RS22750;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase;protein_id=WP_059527970.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 80483 81397 . + . ID=gene-LDO45_RS22755;Name=LDO45_RS22755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22755;old_locus_tag=BDI4_50081 NZ_CAJZAS010000205.1 Protein Homology CDS 80483 81397 . + 0 ID=cds-WP_223963805.1;Parent=gene-LDO45_RS22755;Dbxref=GenBank:WP_223963805.1;Name=WP_223963805.1;Ontology_term=GO:0006629,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398415.1;locus_tag=LDO45_RS22755;product=sterol desaturase family protein;protein_id=WP_223963805.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 81492 82634 . + . ID=gene-LDO45_RS22760;Name=LDO45_RS22760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22760;old_locus_tag=BDI4_50082 NZ_CAJZAS010000205.1 Protein Homology CDS 81492 82634 . + 0 ID=cds-WP_223963806.1;Parent=gene-LDO45_RS22760;Dbxref=GenBank:WP_223963806.1;Name=WP_223963806.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364608.1;locus_tag=LDO45_RS22760;product=SGNH/GDSL hydrolase family protein;protein_id=WP_223963806.1;transl_table=11 NZ_CAJZAS010000205.1 RefSeq gene 82722 83127 . - . ID=gene-LDO45_RS22765;Name=LDO45_RS22765;end_range=83127,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22765;old_locus_tag=BDI4_50083;partial=true NZ_CAJZAS010000205.1 Protein Homology CDS 82722 83127 . - 1 ID=cds-WP_290371029.1;Parent=gene-LDO45_RS22765;Dbxref=GenBank:WP_290371029.1;Name=WP_290371029.1;end_range=83127,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896172.1;locus_tag=LDO45_RS22765;partial=true;product=Sua5 family C-terminal domain-containing protein;protein_id=WP_290371029.1;transl_table=11 ##sequence-region NZ_CAJZAS010000206.1 1 21517 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000206.1 RefSeq region 1 21517 . + . ID=NZ_CAJZAS010000206.1:1..21517;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_50 NZ_CAJZAS010000206.1 RefSeq gene 1 405 . - . ID=gene-LDO45_RS22770;Name=LDO45_RS22770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22770;partial=true;start_range=.,1 NZ_CAJZAS010000206.1 Protein Homology CDS 1 405 . - 0 ID=cds-WP_223963816.1;Parent=gene-LDO45_RS22770;Dbxref=GenBank:WP_223963816.1;Name=WP_223963816.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396370.1;locus_tag=LDO45_RS22770;partial=true;product=amino acid permease;protein_id=WP_223963816.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000206.1 RefSeq gene 631 1494 . - . ID=gene-LDO45_RS22775;Name=LDO45_RS22775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22775;old_locus_tag=BDI4_500002 NZ_CAJZAS010000206.1 Protein Homology CDS 631 1494 . - 0 ID=cds-WP_223963818.1;Parent=gene-LDO45_RS22775;Dbxref=GenBank:WP_223963818.1;Name=WP_223963818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523141.1;locus_tag=LDO45_RS22775;product=glycine betaine ABC transporter substrate-binding protein;protein_id=WP_223963818.1;transl_table=11 NZ_CAJZAS010000206.1 RefSeq gene 1634 2782 . - . ID=gene-LDO45_RS22780;Name=LDO45_RS22780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22780;old_locus_tag=BDI4_500004 NZ_CAJZAS010000206.1 Protein Homology CDS 1634 2782 . - 0 ID=cds-WP_059702351.1;Parent=gene-LDO45_RS22780;Dbxref=GenBank:WP_059702351.1;Name=WP_059702351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749542.1;locus_tag=LDO45_RS22780;product=hybrid-cluster NAD(P)-dependent oxidoreductase;protein_id=WP_059702351.1;transl_table=11 NZ_CAJZAS010000206.1 RefSeq gene 2813 4054 . - . ID=gene-LDO45_RS22785;Name=LDO45_RS22785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22785;old_locus_tag=BDI4_500005 NZ_CAJZAS010000206.1 Protein Homology CDS 2813 4054 . - 0 ID=cds-WP_059534190.1;Parent=gene-LDO45_RS22785;Dbxref=GenBank:WP_059534190.1;Name=WP_059534190.1;Ontology_term=GO:0016491,GO:0051537;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089906.1;locus_tag=LDO45_RS22785;product=aromatic ring-hydroxylating dioxygenase subunit alpha;protein_id=WP_059534190.1;transl_table=11 NZ_CAJZAS010000206.1 RefSeq gene 4107 4892 . - . ID=gene-LDO45_RS22790;Name=LDO45_RS22790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22790;old_locus_tag=BDI4_500006 NZ_CAJZAS010000206.1 Protein Homology CDS 4107 4892 . - 0 ID=cds-WP_223963820.1;Parent=gene-LDO45_RS22790;Dbxref=GenBank:WP_223963820.1;Name=WP_223963820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354185.1;locus_tag=LDO45_RS22790;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_223963820.1;transl_table=11 NZ_CAJZAS010000206.1 RefSeq gene 4889 6058 . - . ID=gene-LDO45_RS22795;Name=LDO45_RS22795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22795;old_locus_tag=BDI4_500007 NZ_CAJZAS010000206.1 Protein Homology CDS 4889 6058 . - 0 ID=cds-WP_223963821.1;Parent=gene-LDO45_RS22795;Dbxref=GenBank:WP_223963821.1;Name=WP_223963821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898534.1;locus_tag=LDO45_RS22795;product=electron transfer flavoprotein subunit alpha/FixB family protein;protein_id=WP_223963821.1;transl_table=11 NZ_CAJZAS010000206.1 RefSeq gene 6063 7988 . - . ID=gene-LDO45_RS22800;Name=LDO45_RS22800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22800;old_locus_tag=BDI4_500008 NZ_CAJZAS010000206.1 Protein Homology CDS 6063 7988 . - 0 ID=cds-WP_059534184.1;Parent=gene-LDO45_RS22800;Dbxref=GenBank:WP_059534184.1;Name=WP_059534184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018315306.1;locus_tag=LDO45_RS22800;product=(Fe-S)-binding protein;protein_id=WP_059534184.1;transl_table=11 NZ_CAJZAS010000206.1 RefSeq gene 7991 10054 . - . ID=gene-LDO45_RS22805;Name=LDO45_RS22805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22805;old_locus_tag=BDI4_500009 NZ_CAJZAS010000206.1 Protein Homology CDS 7991 10054 . - 0 ID=cds-WP_059819544.1;Parent=gene-LDO45_RS22805;Dbxref=GenBank:WP_059819544.1;Name=WP_059819544.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002555665.1;locus_tag=LDO45_RS22805;product=NADH:flavin oxidoreductase;protein_id=WP_059819544.1;transl_table=11 NZ_CAJZAS010000206.1 RefSeq gene 10129 10662 . - . ID=gene-LDO45_RS22810;Name=LDO45_RS22810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22810;old_locus_tag=BDI4_500010 NZ_CAJZAS010000206.1 Protein Homology CDS 10129 10662 . - 0 ID=cds-WP_006488993.1;Parent=gene-LDO45_RS22810;Dbxref=GenBank:WP_006488993.1;Name=WP_006488993.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089911.1;locus_tag=LDO45_RS22810;product=DUF5943 domain-containing protein;protein_id=WP_006488993.1;transl_table=11 NZ_CAJZAS010000206.1 RefSeq gene 10802 11773 . - . ID=gene-LDO45_RS22815;Name=LDO45_RS22815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22815;old_locus_tag=BDI4_500011 NZ_CAJZAS010000206.1 Protein Homology CDS 10802 11773 . - 0 ID=cds-WP_223963822.1;Parent=gene-LDO45_RS22815;Dbxref=GenBank:WP_223963822.1;Name=WP_223963822.1;Ontology_term=GO:0006508,GO:0046872,GO:0070573;gbkey=CDS;go_function=metal ion binding|0046872||IEA,metallodipeptidase activity|0070573||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017773741.1;locus_tag=LDO45_RS22815;product=dipeptidase;protein_id=WP_223963822.1;transl_table=11 NZ_CAJZAS010000206.1 RefSeq gene 11807 13081 . - . ID=gene-LDO45_RS22820;Name=LDO45_RS22820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22820;old_locus_tag=BDI4_500012 NZ_CAJZAS010000206.1 Protein Homology CDS 11807 13081 . - 0 ID=cds-WP_059692029.1;Parent=gene-LDO45_RS22820;Dbxref=GenBank:WP_059692029.1;Name=WP_059692029.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603909.1;locus_tag=LDO45_RS22820;product=serine hydroxymethyltransferase;protein_id=WP_059692029.1;transl_table=11 NZ_CAJZAS010000206.1 RefSeq gene 13530 14555 . + . ID=gene-LDO45_RS22825;Name=LDO45_RS22825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22825;old_locus_tag=BDI4_500015 NZ_CAJZAS010000206.1 Protein Homology CDS 13530 14555 . + 0 ID=cds-WP_059534177.1;Parent=gene-LDO45_RS22825;Dbxref=GenBank:WP_059534177.1;Name=WP_059534177.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339532.1;locus_tag=LDO45_RS22825;product=GlxA family transcriptional regulator;protein_id=WP_059534177.1;transl_table=11 NZ_CAJZAS010000206.1 RefSeq gene 14611 16023 . - . ID=gene-LDO45_RS22830;Name=LDO45_RS22830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22830;old_locus_tag=BDI4_500016 NZ_CAJZAS010000206.1 Protein Homology CDS 14611 16023 . - 0 ID=cds-WP_223963823.1;Parent=gene-LDO45_RS22830;Dbxref=GenBank:WP_223963823.1;Name=WP_223963823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417011.1;locus_tag=LDO45_RS22830;product=discoidin domain-containing protein;protein_id=WP_223963823.1;transl_table=11 NZ_CAJZAS010000206.1 RefSeq gene 16320 17741 . + . ID=gene-LDO45_RS22835;Name=LDO45_RS22835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22835;old_locus_tag=BDI4_500017 NZ_CAJZAS010000206.1 Protein Homology CDS 16320 17741 . + 0 ID=cds-WP_223963824.1;Parent=gene-LDO45_RS22835;Dbxref=GenBank:WP_223963824.1;Name=WP_223963824.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659472.1;locus_tag=LDO45_RS22835;product=PLP-dependent aminotransferase family protein;protein_id=WP_223963824.1;transl_table=11 NZ_CAJZAS010000206.1 RefSeq gene 17750 18595 . + . ID=gene-LDO45_RS22840;Name=LDO45_RS22840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22840;old_locus_tag=BDI4_500018 NZ_CAJZAS010000206.1 Protein Homology CDS 17750 18595 . + 0 ID=cds-WP_223963825.1;Parent=gene-LDO45_RS22840;Dbxref=GenBank:WP_223963825.1;Name=WP_223963825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898527.1;locus_tag=LDO45_RS22840;product=ATP-dependent serine protease;protein_id=WP_223963825.1;transl_table=11 NZ_CAJZAS010000206.1 RefSeq gene 18689 19885 . - . ID=gene-LDO45_RS22845;Name=fdhA;gbkey=Gene;gene=fdhA;gene_biotype=protein_coding;locus_tag=LDO45_RS22845;old_locus_tag=BDI4_500019 NZ_CAJZAS010000206.1 Protein Homology CDS 18689 19885 . - 0 ID=cds-WP_044844368.1;Parent=gene-LDO45_RS22845;Dbxref=GenBank:WP_044844368.1;Name=WP_044844368.1;Ontology_term=GO:0046292,GO:0018467;gbkey=CDS;gene=fdhA;go_function=formaldehyde dehydrogenase (NAD+) activity|0018467||IEA;go_process=formaldehyde metabolic process|0046292||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396349.1;locus_tag=LDO45_RS22845;product=formaldehyde dehydrogenase%2C glutathione-independent;protein_id=WP_044844368.1;transl_table=11 NZ_CAJZAS010000206.1 RefSeq pseudogene 20167 21386 . - . ID=gene-LDO45_RS22850;Name=LDO45_RS22850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS22850;old_locus_tag=BDI4_500021;pseudo=true NZ_CAJZAS010000206.1 Protein Homology CDS 20167 21386 . - 0 ID=cds-LDO45_RS22850;Parent=gene-LDO45_RS22850;Note=frameshifted%3B too many ambiguous residues;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498736.1;locus_tag=LDO45_RS22850;product=HlyD family efflux transporter periplasmic adaptor subunit;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000207.1 1 69046 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000207.1 RefSeq region 1 69046 . + . ID=NZ_CAJZAS010000207.1:1..69046;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_51 NZ_CAJZAS010000207.1 RefSeq gene 1 337 . + . ID=gene-LDO45_RS22855;Name=LDO45_RS22855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22855;old_locus_tag=BDI4_510001;partial=true;start_range=.,1 NZ_CAJZAS010000207.1 Protein Homology CDS 1 337 . + 1 ID=cds-WP_290371030.1;Parent=gene-LDO45_RS22855;Dbxref=GenBank:WP_290371030.1;Name=WP_290371030.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723165.1;locus_tag=LDO45_RS22855;partial=true;product=NAD(P)H-hydrate dehydratase;protein_id=WP_290371030.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 449 2071 . + . ID=gene-LDO45_RS22860;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=LDO45_RS22860;old_locus_tag=BDI4_510002 NZ_CAJZAS010000207.1 Protein Homology CDS 449 2071 . + 0 ID=cds-WP_223963826.1;Parent=gene-LDO45_RS22860;Dbxref=GenBank:WP_223963826.1;Name=WP_223963826.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332014.1;locus_tag=LDO45_RS22860;product=glucose-6-phosphate isomerase;protein_id=WP_223963826.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 2147 2848 . - . ID=gene-LDO45_RS22865;Name=LDO45_RS22865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22865;old_locus_tag=BDI4_510003 NZ_CAJZAS010000207.1 Protein Homology CDS 2147 2848 . - 0 ID=cds-WP_059529693.1;Parent=gene-LDO45_RS22865;Dbxref=GenBank:WP_059529693.1;Name=WP_059529693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402245.1;locus_tag=LDO45_RS22865;product=ABC transporter ATP-binding protein;protein_id=WP_059529693.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 2847 3521 . + . ID=gene-LDO45_RS22870;Name=LDO45_RS22870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22870;old_locus_tag=BDI4_510004 NZ_CAJZAS010000207.1 Protein Homology CDS 2847 3521 . + 0 ID=cds-WP_223963827.1;Parent=gene-LDO45_RS22870;Dbxref=GenBank:WP_223963827.1;Name=WP_223963827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489343.1;locus_tag=LDO45_RS22870;product=arylesterase;protein_id=WP_223963827.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 3634 5568 . - . ID=gene-LDO45_RS22875;Name=LDO45_RS22875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22875;old_locus_tag=BDI4_510005 NZ_CAJZAS010000207.1 Protein Homology CDS 3634 5568 . - 0 ID=cds-WP_223963829.1;Parent=gene-LDO45_RS22875;Dbxref=GenBank:WP_223963829.1;Name=WP_223963829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554314.1;locus_tag=LDO45_RS22875;product=SurA N-terminal domain-containing protein;protein_id=WP_223963829.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 5706 5782 . - . ID=gene-LDO45_RS22880;Name=LDO45_RS22880;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS22880;old_locus_tag=BDI4_TRNA39 NZ_CAJZAS010000207.1 tRNAscan-SE tRNA 5706 5782 . - . ID=rna-LDO45_RS22880;Parent=gene-LDO45_RS22880;anticodon=(pos:complement(5746..5748));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS22880;product=tRNA-Asp NZ_CAJZAS010000207.1 tRNAscan-SE exon 5706 5782 . - . ID=exon-LDO45_RS22880-1;Parent=rna-LDO45_RS22880;anticodon=(pos:complement(5746..5748));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS22880;product=tRNA-Asp NZ_CAJZAS010000207.1 RefSeq gene 5806 5881 . - . ID=gene-LDO45_RS22885;Name=LDO45_RS22885;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS22885;old_locus_tag=BDI4_TRNA38 NZ_CAJZAS010000207.1 tRNAscan-SE tRNA 5806 5881 . - . ID=rna-LDO45_RS22885;Parent=gene-LDO45_RS22885;anticodon=(pos:complement(5846..5848));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS22885;product=tRNA-Val NZ_CAJZAS010000207.1 tRNAscan-SE exon 5806 5881 . - . ID=exon-LDO45_RS22885-1;Parent=rna-LDO45_RS22885;anticodon=(pos:complement(5846..5848));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS22885;product=tRNA-Val NZ_CAJZAS010000207.1 RefSeq gene 6086 8509 . - . ID=gene-LDO45_RS22890;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=LDO45_RS22890;old_locus_tag=BDI4_510007 NZ_CAJZAS010000207.1 Protein Homology CDS 6086 8509 . - 0 ID=cds-WP_044843675.1;Parent=gene-LDO45_RS22890;Dbxref=GenBank:WP_044843675.1;Name=WP_044843675.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007585905.1;locus_tag=LDO45_RS22890;product=endopeptidase La;protein_id=WP_044843675.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 8707 9978 . - . ID=gene-LDO45_RS22895;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=LDO45_RS22895;old_locus_tag=BDI4_510008 NZ_CAJZAS010000207.1 Protein Homology CDS 8707 9978 . - 0 ID=cds-WP_006754177.1;Parent=gene-LDO45_RS22895;Dbxref=GenBank:WP_006754177.1;Name=WP_006754177.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521258.1;locus_tag=LDO45_RS22895;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=WP_006754177.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 10143 10796 . - . ID=gene-LDO45_RS22900;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=LDO45_RS22900;old_locus_tag=BDI4_510009 NZ_CAJZAS010000207.1 Protein Homology CDS 10143 10796 . - 0 ID=cds-WP_006496351.1;Parent=gene-LDO45_RS22900;Dbxref=GenBank:WP_006496351.1;Name=WP_006496351.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026149.1;locus_tag=LDO45_RS22900;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_006496351.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 10937 12283 . - . ID=gene-LDO45_RS22905;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=LDO45_RS22905;old_locus_tag=BDI4_510010 NZ_CAJZAS010000207.1 Protein Homology CDS 10937 12283 . - 0 ID=cds-WP_059529684.1;Parent=gene-LDO45_RS22905;Dbxref=GenBank:WP_059529684.1;Name=WP_059529684.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004539679.1;locus_tag=LDO45_RS22905;product=trigger factor;protein_id=WP_059529684.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 12671 13816 . + . ID=gene-LDO45_RS22910;Name=LDO45_RS22910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22910;old_locus_tag=BDI4_510011 NZ_CAJZAS010000207.1 Protein Homology CDS 12671 13816 . + 0 ID=cds-WP_223963831.1;Parent=gene-LDO45_RS22910;Dbxref=GenBank:WP_223963831.1;Name=WP_223963831.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364080.1;locus_tag=LDO45_RS22910;product=glycerate kinase;protein_id=WP_223963831.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 13879 14328 . + . ID=gene-LDO45_RS22915;Name=LDO45_RS22915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22915;old_locus_tag=BDI4_510012 NZ_CAJZAS010000207.1 Protein Homology CDS 13879 14328 . + 0 ID=cds-WP_059693366.1;Parent=gene-LDO45_RS22915;Dbxref=GenBank:WP_059693366.1;Name=WP_059693366.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478574.1;locus_tag=LDO45_RS22915;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_059693366.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 14482 15480 . - . ID=gene-LDO45_RS22920;Name=LDO45_RS22920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22920;old_locus_tag=BDI4_510013 NZ_CAJZAS010000207.1 Protein Homology CDS 14482 15480 . - 0 ID=cds-WP_223963833.1;Parent=gene-LDO45_RS22920;Dbxref=GenBank:WP_223963833.1;Name=WP_223963833.1;Ontology_term=GO:0015940,GO:0008677,GO:0050661;gbkey=CDS;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA,NADP binding|0050661||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213186.1;locus_tag=LDO45_RS22920;product=2-dehydropantoate 2-reductase;protein_id=WP_223963833.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 15582 16724 . - . ID=gene-LDO45_RS22925;Name=LDO45_RS22925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22925;old_locus_tag=BDI4_510015 NZ_CAJZAS010000207.1 Protein Homology CDS 15582 16724 . - 0 ID=cds-WP_223963835.1;Parent=gene-LDO45_RS22925;Dbxref=GenBank:WP_223963835.1;Name=WP_223963835.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657166.1;locus_tag=LDO45_RS22925;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_223963835.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 17028 18071 . + . ID=gene-LDO45_RS22930;Name=LDO45_RS22930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22930;old_locus_tag=BDI4_510014 NZ_CAJZAS010000207.1 Protein Homology CDS 17028 18071 . + 0 ID=cds-WP_223963836.1;Parent=gene-LDO45_RS22930;Dbxref=GenBank:WP_223963836.1;Name=WP_223963836.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328705.1;locus_tag=LDO45_RS22930;product=porin;protein_id=WP_223963836.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 18094 19311 . + . ID=gene-LDO45_RS22935;Name=LDO45_RS22935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22935;old_locus_tag=BDI4_510016 NZ_CAJZAS010000207.1 Protein Homology CDS 18094 19311 . + 0 ID=cds-WP_223963837.1;Parent=gene-LDO45_RS22935;Dbxref=GenBank:WP_223963837.1;Name=WP_223963837.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478570.1;locus_tag=LDO45_RS22935;product=MFS transporter;protein_id=WP_223963837.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 19326 20435 . + . ID=gene-LDO45_RS22940;Name=LDO45_RS22940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22940;old_locus_tag=BDI4_510017 NZ_CAJZAS010000207.1 Protein Homology CDS 19326 20435 . + 0 ID=cds-WP_223963838.1;Parent=gene-LDO45_RS22940;Dbxref=GenBank:WP_223963838.1;Name=WP_223963838.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328707.1;locus_tag=LDO45_RS22940;product=class II histone deacetylase;protein_id=WP_223963838.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 20533 20763 . + . ID=gene-LDO45_RS22945;Name=LDO45_RS22945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22945;old_locus_tag=BDI4_510018 NZ_CAJZAS010000207.1 Protein Homology CDS 20533 20763 . + 0 ID=cds-WP_059698584.1;Parent=gene-LDO45_RS22945;Dbxref=GenBank:WP_059698584.1;Name=WP_059698584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402226.1;locus_tag=LDO45_RS22945;product=hypothetical protein;protein_id=WP_059698584.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 20991 21077 . - . ID=gene-LDO45_RS22950;Name=LDO45_RS22950;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS22950;old_locus_tag=BDI4_TRNA37 NZ_CAJZAS010000207.1 tRNAscan-SE tRNA 20991 21077 . - . ID=rna-LDO45_RS22950;Parent=gene-LDO45_RS22950;anticodon=(pos:complement(21041..21043));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS22950;product=tRNA-Leu NZ_CAJZAS010000207.1 tRNAscan-SE exon 20991 21077 . - . ID=exon-LDO45_RS22950-1;Parent=rna-LDO45_RS22950;anticodon=(pos:complement(21041..21043));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS22950;product=tRNA-Leu NZ_CAJZAS010000207.1 RefSeq gene 21314 22147 . + . ID=gene-LDO45_RS22955;Name=hpnD;gbkey=Gene;gene=hpnD;gene_biotype=protein_coding;locus_tag=LDO45_RS22955;old_locus_tag=BDI4_510019 NZ_CAJZAS010000207.1 Protein Homology CDS 21314 22147 . + 0 ID=cds-WP_223963839.1;Parent=gene-LDO45_RS22955;Dbxref=GenBank:WP_223963839.1;Name=WP_223963839.1;Ontology_term=GO:0016117,GO:0016767;gbkey=CDS;gene=hpnD;go_function=geranylgeranyl-diphosphate geranylgeranyltransferase activity|0016767||IEA;go_process=carotenoid biosynthetic process|0016117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417261.1;locus_tag=LDO45_RS22955;product=presqualene diphosphate synthase HpnD;protein_id=WP_223963839.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 22172 23395 . - . ID=gene-LDO45_RS22960;Name=LDO45_RS22960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22960;old_locus_tag=BDI4_510020 NZ_CAJZAS010000207.1 Protein Homology CDS 22172 23395 . - 0 ID=cds-WP_223963840.1;Parent=gene-LDO45_RS22960;Dbxref=GenBank:WP_223963840.1;Name=WP_223963840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752035.1;locus_tag=LDO45_RS22960;product=DUF1501 domain-containing protein;protein_id=WP_223963840.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 23463 24962 . - . ID=gene-LDO45_RS22965;Name=LDO45_RS22965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22965;old_locus_tag=BDI4_510021 NZ_CAJZAS010000207.1 Protein Homology CDS 23463 24962 . - 0 ID=cds-WP_223963846.1;Parent=gene-LDO45_RS22965;Dbxref=GenBank:WP_223963846.1;Name=WP_223963846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549599.1;locus_tag=LDO45_RS22965;product=DUF1800 family protein;protein_id=WP_223963846.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 25083 25361 . - . ID=gene-LDO45_RS22970;Name=LDO45_RS22970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22970;old_locus_tag=BDI4_510022 NZ_CAJZAS010000207.1 Protein Homology CDS 25083 25361 . - 0 ID=cds-WP_059529638.1;Parent=gene-LDO45_RS22970;Dbxref=GenBank:WP_059529638.1;Name=WP_059529638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352385.1;locus_tag=LDO45_RS22970;product=hypothetical protein;protein_id=WP_059529638.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 25620 26354 . + . ID=gene-LDO45_RS22975;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=LDO45_RS22975;old_locus_tag=BDI4_510023 NZ_CAJZAS010000207.1 Protein Homology CDS 25620 26354 . + 0 ID=cds-WP_004192636.1;Parent=gene-LDO45_RS22975;Dbxref=GenBank:WP_004192636.1;Name=WP_004192636.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009517537.1;locus_tag=LDO45_RS22975;product=two-component system response regulator OmpR;protein_id=WP_004192636.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 26395 27756 . + . ID=gene-LDO45_RS22980;Name=LDO45_RS22980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22980;old_locus_tag=BDI4_510024 NZ_CAJZAS010000207.1 Protein Homology CDS 26395 27756 . + 0 ID=cds-WP_059529635.1;Parent=gene-LDO45_RS22980;Dbxref=GenBank:WP_059529635.1;Name=WP_059529635.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364087.1;locus_tag=LDO45_RS22980;product=ATP-binding protein;protein_id=WP_059529635.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 27946 28494 . + . ID=gene-LDO45_RS22985;Name=LDO45_RS22985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22985;old_locus_tag=BDI4_510025 NZ_CAJZAS010000207.1 Protein Homology CDS 27946 28494 . + 0 ID=cds-WP_006478563.1;Parent=gene-LDO45_RS22985;Dbxref=GenBank:WP_006478563.1;Name=WP_006478563.1;Ontology_term=GO:0008379;gbkey=CDS;go_function=thioredoxin peroxidase activity|0008379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192241.1;locus_tag=LDO45_RS22985;product=peroxiredoxin;protein_id=WP_006478563.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 28571 29098 . + . ID=gene-LDO45_RS22990;Name=LDO45_RS22990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS22990;old_locus_tag=BDI4_510026 NZ_CAJZAS010000207.1 Protein Homology CDS 28571 29098 . + 0 ID=cds-WP_044843722.1;Parent=gene-LDO45_RS22990;Dbxref=GenBank:WP_044843722.1;Name=WP_044843722.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193734.1;locus_tag=LDO45_RS22990;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_044843722.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 29243 29728 . - . ID=gene-LDO45_RS22995;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=LDO45_RS22995;old_locus_tag=BDI4_510027 NZ_CAJZAS010000207.1 Protein Homology CDS 29243 29728 . - 0 ID=cds-WP_057925367.1;Parent=gene-LDO45_RS22995;Dbxref=GenBank:WP_057925367.1;Name=WP_057925367.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364088.1;locus_tag=LDO45_RS22995;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_057925367.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 29757 30467 . - . ID=gene-LDO45_RS23000;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=LDO45_RS23000;old_locus_tag=BDI4_510028 NZ_CAJZAS010000207.1 Protein Homology CDS 29757 30467 . - 0 ID=cds-WP_059529630.1;Parent=gene-LDO45_RS23000;Dbxref=GenBank:WP_059529630.1;Name=WP_059529630.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402218.1;locus_tag=LDO45_RS23000;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_059529630.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 30576 34046 . + . ID=gene-LDO45_RS23005;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=LDO45_RS23005;old_locus_tag=BDI4_510029 NZ_CAJZAS010000207.1 Protein Homology CDS 30576 34046 . + 0 ID=cds-WP_059529627.1;Parent=gene-LDO45_RS23005;Dbxref=GenBank:WP_059529627.1;Name=WP_059529627.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415640.1;locus_tag=LDO45_RS23005;product=transcription-repair coupling factor;protein_id=WP_059529627.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 34143 35363 . + . ID=gene-LDO45_RS23010;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=LDO45_RS23010;old_locus_tag=BDI4_510030 NZ_CAJZAS010000207.1 Protein Homology CDS 34143 35363 . + 0 ID=cds-WP_059529624.1;Parent=gene-LDO45_RS23010;Dbxref=GenBank:WP_059529624.1;Name=WP_059529624.1;Ontology_term=GO:0006526,GO:0006592,GO:0008777;gbkey=CDS;gene=argE;go_function=acetylornithine deacetylase activity|0008777||IEA;go_process=arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896786.1;locus_tag=LDO45_RS23010;product=acetylornithine deacetylase;protein_id=WP_059529624.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 35424 36443 . + . ID=gene-LDO45_RS23015;Name=LDO45_RS23015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23015;old_locus_tag=BDI4_510031 NZ_CAJZAS010000207.1 Protein Homology CDS 35424 36443 . + 0 ID=cds-WP_059529616.1;Parent=gene-LDO45_RS23015;Dbxref=GenBank:WP_059529616.1;Name=WP_059529616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364092.1;locus_tag=LDO45_RS23015;product=threonine/serine dehydratase;protein_id=WP_059529616.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 36577 37047 . + . ID=gene-LDO45_RS23020;Name=LDO45_RS23020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23020;old_locus_tag=BDI4_510032 NZ_CAJZAS010000207.1 Protein Homology CDS 36577 37047 . + 0 ID=cds-WP_223963848.1;Parent=gene-LDO45_RS23020;Dbxref=GenBank:WP_223963848.1;Name=WP_223963848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478556.1;locus_tag=LDO45_RS23020;product=DUF3574 domain-containing protein;protein_id=WP_223963848.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 37135 39654 . - . ID=gene-LDO45_RS23025;Name=LDO45_RS23025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23025;old_locus_tag=BDI4_510033 NZ_CAJZAS010000207.1 Protein Homology CDS 37135 39654 . - 0 ID=cds-WP_059698601.1;Parent=gene-LDO45_RS23025;Dbxref=GenBank:WP_059698601.1;Name=WP_059698601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415646.1;locus_tag=LDO45_RS23025;product=penicillin-binding protein 1A;protein_id=WP_059698601.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 40092 40772 . + . ID=gene-LDO45_RS23030;Name=LDO45_RS23030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23030;old_locus_tag=BDI4_510035 NZ_CAJZAS010000207.1 Protein Homology CDS 40092 40772 . + 0 ID=cds-WP_044843730.1;Parent=gene-LDO45_RS23030;Dbxref=GenBank:WP_044843730.1;Name=WP_044843730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193810.1;locus_tag=LDO45_RS23030;product=PspA/IM30 family protein;protein_id=WP_044843730.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 40851 42023 . + . ID=gene-LDO45_RS23035;Name=LDO45_RS23035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23035;old_locus_tag=BDI4_510036 NZ_CAJZAS010000207.1 Protein Homology CDS 40851 42023 . + 0 ID=cds-WP_223963850.1;Parent=gene-LDO45_RS23035;Dbxref=GenBank:WP_223963850.1;Name=WP_223963850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467640.1;locus_tag=LDO45_RS23035;product=tetratricopeptide repeat protein;protein_id=WP_223963850.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 42274 42705 . + . ID=gene-LDO45_RS23040;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=LDO45_RS23040;old_locus_tag=BDI4_510037 NZ_CAJZAS010000207.1 Protein Homology CDS 42274 42705 . + 0 ID=cds-WP_059529603.1;Parent=gene-LDO45_RS23040;Dbxref=GenBank:WP_059529603.1;Name=WP_059529603.1;Ontology_term=GO:0034220,GO:0008381,GO:0016020;gbkey=CDS;gene=mscL;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=monoatomic ion transmembrane transport|0034220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487991.1;locus_tag=LDO45_RS23040;product=large conductance mechanosensitive channel protein MscL;protein_id=WP_059529603.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 43037 43483 . + . ID=gene-LDO45_RS23045;Name=LDO45_RS23045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23045;old_locus_tag=BDI4_510038 NZ_CAJZAS010000207.1 Protein Homology CDS 43037 43483 . + 0 ID=cds-WP_027784713.1;Parent=gene-LDO45_RS23045;Dbxref=GenBank:WP_027784713.1;Name=WP_027784713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331909.1;locus_tag=LDO45_RS23045;product=hypothetical protein;protein_id=WP_027784713.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 43561 44454 . - . ID=gene-LDO45_RS23050;Name=LDO45_RS23050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23050;old_locus_tag=BDI4_510039 NZ_CAJZAS010000207.1 Protein Homology CDS 43561 44454 . - 0 ID=cds-WP_223963852.1;Parent=gene-LDO45_RS23050;Dbxref=GenBank:WP_223963852.1;Name=WP_223963852.1;Ontology_term=GO:0050661,GO:0051287;gbkey=CDS;go_function=NADP binding|0050661||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657185.1;locus_tag=LDO45_RS23050;product=NAD(P)-dependent oxidoreductase;protein_id=WP_223963852.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 44590 44799 . + . ID=gene-LDO45_RS23055;Name=LDO45_RS23055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23055;old_locus_tag=BDI4_510040 NZ_CAJZAS010000207.1 Protein Homology CDS 44590 44799 . + 0 ID=cds-WP_006755984.1;Parent=gene-LDO45_RS23055;Dbxref=GenBank:WP_006755984.1;Name=WP_006755984.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890522.1;locus_tag=LDO45_RS23055;product=dodecin;protein_id=WP_006755984.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 45021 45950 . + . ID=gene-LDO45_RS23060;Name=LDO45_RS23060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23060;old_locus_tag=BDI4_510041 NZ_CAJZAS010000207.1 Protein Homology CDS 45021 45950 . + 0 ID=cds-WP_006762467.1;Parent=gene-LDO45_RS23060;Dbxref=GenBank:WP_006762467.1;Name=WP_006762467.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698381.1;locus_tag=LDO45_RS23060;product=LysR substrate-binding domain-containing protein;protein_id=WP_006762467.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 46078 47490 . - . ID=gene-LDO45_RS23065;Name=LDO45_RS23065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23065;old_locus_tag=BDI4_510042 NZ_CAJZAS010000207.1 Protein Homology CDS 46078 47490 . - 0 ID=cds-WP_059529598.1;Parent=gene-LDO45_RS23065;Dbxref=GenBank:WP_059529598.1;Name=WP_059529598.1;Ontology_term=GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754392.1;locus_tag=LDO45_RS23065;product=8-oxoguanine deaminase;protein_id=WP_059529598.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 48001 48354 . + . ID=gene-LDO45_RS23070;Name=uraH;gbkey=Gene;gene=uraH;gene_biotype=protein_coding;locus_tag=LDO45_RS23070;old_locus_tag=BDI4_510043 NZ_CAJZAS010000207.1 Protein Homology CDS 48001 48354 . + 0 ID=cds-WP_011657188.1;Parent=gene-LDO45_RS23070;Dbxref=GenBank:WP_011657188.1;Name=WP_011657188.1;Ontology_term=GO:0006144,GO:0033971;gbkey=CDS;gene=uraH;go_function=hydroxyisourate hydrolase activity|0033971||IEA;go_process=purine nucleobase metabolic process|0006144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495593.1;locus_tag=LDO45_RS23070;product=hydroxyisourate hydrolase;protein_id=WP_011657188.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 48408 49601 . + . ID=gene-LDO45_RS23075;Name=LDO45_RS23075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23075;old_locus_tag=BDI4_510044 NZ_CAJZAS010000207.1 Protein Homology CDS 48408 49601 . + 0 ID=cds-WP_059698607.1;Parent=gene-LDO45_RS23075;Dbxref=GenBank:WP_059698607.1;Name=WP_059698607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521221.1;locus_tag=LDO45_RS23075;product=urate hydroxylase PuuD;protein_id=WP_059698607.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 49704 50114 . - . ID=gene-LDO45_RS23080;Name=LDO45_RS23080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23080;old_locus_tag=BDI4_510045 NZ_CAJZAS010000207.1 Protein Homology CDS 49704 50114 . - 0 ID=cds-WP_223963854.1;Parent=gene-LDO45_RS23080;Dbxref=GenBank:WP_223963854.1;Name=WP_223963854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352403.1;locus_tag=LDO45_RS23080;product=ACT domain-containing protein;protein_id=WP_223963854.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 50289 50801 . - . ID=gene-LDO45_RS23085;Name=LDO45_RS23085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23085;old_locus_tag=BDI4_510046 NZ_CAJZAS010000207.1 Protein Homology CDS 50289 50801 . - 0 ID=cds-WP_059529590.1;Parent=gene-LDO45_RS23085;Dbxref=GenBank:WP_059529590.1;Name=WP_059529590.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413644.1;locus_tag=LDO45_RS23085;product=ureidoglycolate lyase;protein_id=WP_059529590.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 50798 51811 . - . ID=gene-LDO45_RS23090;Name=alc;gbkey=Gene;gene=alc;gene_biotype=protein_coding;locus_tag=LDO45_RS23090;old_locus_tag=BDI4_510047 NZ_CAJZAS010000207.1 Protein Homology CDS 50798 51811 . - 0 ID=cds-WP_223963856.1;Parent=gene-LDO45_RS23090;Dbxref=GenBank:WP_223963856.1;Name=WP_223963856.1;Ontology_term=GO:0000256,GO:0004037;gbkey=CDS;gene=alc;go_function=allantoicase activity|0004037||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909169.1;locus_tag=LDO45_RS23090;product=allantoicase;protein_id=WP_223963856.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 51873 52394 . - . ID=gene-LDO45_RS23095;Name=uraD;gbkey=Gene;gene=uraD;gene_biotype=protein_coding;locus_tag=LDO45_RS23095;old_locus_tag=BDI4_510048 NZ_CAJZAS010000207.1 Protein Homology CDS 51873 52394 . - 0 ID=cds-WP_059693513.1;Parent=gene-LDO45_RS23095;Dbxref=GenBank:WP_059693513.1;Name=WP_059693513.1;Ontology_term=GO:0000255;gbkey=CDS;gene=uraD;go_process=allantoin metabolic process|0000255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364104.1;locus_tag=LDO45_RS23095;product=2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase;protein_id=WP_059693513.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 52391 53344 . - . ID=gene-LDO45_RS23100;Name=puuE;gbkey=Gene;gene=puuE;gene_biotype=protein_coding;locus_tag=LDO45_RS23100;old_locus_tag=BDI4_510049 NZ_CAJZAS010000207.1 Protein Homology CDS 52391 53344 . - 0 ID=cds-WP_223963858.1;Parent=gene-LDO45_RS23100;Dbxref=GenBank:WP_223963858.1;Name=WP_223963858.1;Ontology_term=GO:0000256,GO:0016810;gbkey=CDS;gene=puuE;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=allantoin catabolic process|0000256||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521217.1;locus_tag=LDO45_RS23100;product=allantoinase PuuE;protein_id=WP_223963858.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 53495 54331 . - . ID=gene-LDO45_RS23105;Name=LDO45_RS23105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23105;old_locus_tag=BDI4_510050 NZ_CAJZAS010000207.1 Protein Homology CDS 53495 54331 . - 0 ID=cds-WP_223963860.1;Parent=gene-LDO45_RS23105;Dbxref=GenBank:WP_223963860.1;Name=WP_223963860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490202.1;locus_tag=LDO45_RS23105;product=aspartate/glutamate racemase family protein;protein_id=WP_223963860.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 54342 55826 . - . ID=gene-LDO45_RS23110;Name=LDO45_RS23110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23110;old_locus_tag=BDI4_510051 NZ_CAJZAS010000207.1 Protein Homology CDS 54342 55826 . - 0 ID=cds-WP_059529575.1;Parent=gene-LDO45_RS23110;Dbxref=GenBank:WP_059529575.1;Name=WP_059529575.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549579.1;locus_tag=LDO45_RS23110;product=NCS1 family nucleobase:cation symporter-1;protein_id=WP_059529575.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 55976 56680 . - . ID=gene-LDO45_RS23115;Name=LDO45_RS23115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23115;old_locus_tag=BDI4_510052 NZ_CAJZAS010000207.1 Protein Homology CDS 55976 56680 . - 0 ID=cds-WP_059599950.1;Parent=gene-LDO45_RS23115;Dbxref=GenBank:WP_059599950.1;Name=WP_059599950.1;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364108.1;locus_tag=LDO45_RS23115;product=GntR family transcriptional regulator;protein_id=WP_059599950.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 56990 57928 . - . ID=gene-LDO45_RS23120;Name=ldcA;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=LDO45_RS23120;old_locus_tag=BDI4_510054 NZ_CAJZAS010000207.1 Protein Homology CDS 56990 57928 . - 0 ID=cds-WP_059529569.1;Parent=gene-LDO45_RS23120;Dbxref=GenBank:WP_059529569.1;Name=WP_059529569.1;gbkey=CDS;gene=ldcA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549577.1;locus_tag=LDO45_RS23120;product=muramoyltetrapeptide carboxypeptidase;protein_id=WP_059529569.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 58034 58615 . - . ID=gene-LDO45_RS23125;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=LDO45_RS23125;old_locus_tag=BDI4_510055 NZ_CAJZAS010000207.1 Protein Homology CDS 58034 58615 . - 0 ID=cds-WP_059529566.1;Parent=gene-LDO45_RS23125;Dbxref=GenBank:WP_059529566.1;Name=WP_059529566.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495582.1;locus_tag=LDO45_RS23125;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_059529566.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 58612 59013 . - . ID=gene-LDO45_RS23130;Name=LDO45_RS23130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23130;old_locus_tag=BDI4_510056 NZ_CAJZAS010000207.1 Protein Homology CDS 58612 59013 . - 0 ID=cds-WP_009694817.1;Parent=gene-LDO45_RS23130;Dbxref=GenBank:WP_009694817.1;Name=WP_009694817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193068.1;locus_tag=LDO45_RS23130;product=DnaJ family domain-containing protein;protein_id=WP_009694817.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 59287 60504 . - . ID=gene-LDO45_RS23135;Name=LDO45_RS23135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23135;old_locus_tag=BDI4_510058 NZ_CAJZAS010000207.1 Protein Homology CDS 59287 60504 . - 0 ID=cds-WP_059693516.1;Parent=gene-LDO45_RS23135;Dbxref=GenBank:WP_059693516.1;Name=WP_059693516.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407677.1;locus_tag=LDO45_RS23135;product=MFS transporter;protein_id=WP_059693516.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 60812 61582 . + . ID=gene-LDO45_RS23140;Name=LDO45_RS23140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23140;old_locus_tag=BDI4_510059 NZ_CAJZAS010000207.1 Protein Homology CDS 60812 61582 . + 0 ID=cds-WP_059529561.1;Parent=gene-LDO45_RS23140;Dbxref=GenBank:WP_059529561.1;Name=WP_059529561.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413630.1;locus_tag=LDO45_RS23140;product=GntR family transcriptional regulator;protein_id=WP_059529561.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 61579 63318 . + . ID=gene-LDO45_RS23145;Name=LDO45_RS23145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23145;old_locus_tag=BDI4_510060 NZ_CAJZAS010000207.1 Protein Homology CDS 61579 63318 . + 0 ID=cds-WP_223963862.1;Parent=gene-LDO45_RS23145;Dbxref=GenBank:WP_223963862.1;Name=WP_223963862.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411180.1;locus_tag=LDO45_RS23145;product=fumarate reductase/succinate dehydrogenase flavoprotein subunit;protein_id=WP_223963862.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 63336 63581 . + . ID=gene-LDO45_RS23150;Name=LDO45_RS23150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23150;old_locus_tag=BDI4_510061 NZ_CAJZAS010000207.1 Protein Homology CDS 63336 63581 . + 0 ID=cds-WP_059529554.1;Parent=gene-LDO45_RS23150;Dbxref=GenBank:WP_059529554.1;Name=WP_059529554.1;Ontology_term=GO:0009055,GO:0046872,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490846.1;locus_tag=LDO45_RS23150;product=ferredoxin family protein;protein_id=WP_059529554.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 63595 63768 . + . ID=gene-LDO45_RS23155;Name=LDO45_RS23155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23155;old_locus_tag=BDI4_510062 NZ_CAJZAS010000207.1 GeneMarkS-2+ CDS 63595 63768 . + 0 ID=cds-WP_156441394.1;Parent=gene-LDO45_RS23155;Dbxref=GenBank:WP_156441394.1;Name=WP_156441394.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS23155;product=hypothetical protein;protein_id=WP_156441394.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 63786 64781 . + . ID=gene-LDO45_RS23160;Name=LDO45_RS23160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23160;old_locus_tag=BDI4_510063 NZ_CAJZAS010000207.1 Protein Homology CDS 63786 64781 . + 0 ID=cds-WP_059529551.1;Parent=gene-LDO45_RS23160;Dbxref=GenBank:WP_059529551.1;Name=WP_059529551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495576.1;locus_tag=LDO45_RS23160;product=HEAT repeat domain-containing protein;protein_id=WP_059529551.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 64778 65119 . + . ID=gene-LDO45_RS23165;Name=LDO45_RS23165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23165;old_locus_tag=BDI4_510064 NZ_CAJZAS010000207.1 Protein Homology CDS 64778 65119 . + 0 ID=cds-WP_223963864.1;Parent=gene-LDO45_RS23165;Dbxref=GenBank:WP_223963864.1;Name=WP_223963864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411514.1;locus_tag=LDO45_RS23165;product=gamma-butyrobetaine hydroxylase-like domain-containing protein;protein_id=WP_223963864.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 65305 66924 . - . ID=gene-LDO45_RS23170;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=LDO45_RS23170;old_locus_tag=BDI4_510065 NZ_CAJZAS010000207.1 Protein Homology CDS 65305 66924 . - 0 ID=cds-WP_059529378.1;Parent=gene-LDO45_RS23170;Dbxref=GenBank:WP_059529378.1;Name=WP_059529378.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402676.1;locus_tag=LDO45_RS23170;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_059529378.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 67032 67619 . - . ID=gene-LDO45_RS23175;Name=LDO45_RS23175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23175;old_locus_tag=BDI4_510066 NZ_CAJZAS010000207.1 Protein Homology CDS 67032 67619 . - 0 ID=cds-WP_223963866.1;Parent=gene-LDO45_RS23175;Dbxref=GenBank:WP_223963866.1;Name=WP_223963866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761440.1;locus_tag=LDO45_RS23175;product=hypothetical protein;protein_id=WP_223963866.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 67626 68632 . - . ID=gene-LDO45_RS23180;Name=LDO45_RS23180;end_range=68632,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23180;old_locus_tag=BDI4_510067;partial=true NZ_CAJZAS010000207.1 Protein Homology CDS 67626 68632 . - 2 ID=cds-WP_374109546.1;Parent=gene-LDO45_RS23180;Dbxref=GenBank:WP_374109546.1;Name=WP_374109546.1;end_range=68632,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003266329.1;locus_tag=LDO45_RS23180;partial=true;product=IMP dehydrogenase;protein_id=WP_374109546.1;transl_table=11 NZ_CAJZAS010000207.1 RefSeq gene 68643 68743 . - . ID=gene-LDO45_RS34620;Name=LDO45_RS34620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34620;partial=true;start_range=.,68643 NZ_CAJZAS010000207.1 Protein Homology CDS 68643 68743 . - 0 ID=cds-WP_374109545.1;Parent=gene-LDO45_RS34620;Dbxref=GenBank:WP_374109545.1;Name=WP_374109545.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF012690.5;locus_tag=LDO45_RS34620;partial=true;product=IMP dehydrogenase;protein_id=WP_374109545.1;start_range=.,68643;transl_table=11 ##sequence-region NZ_CAJZAS010000208.1 1 22251 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000208.1 RefSeq region 1 22251 . + . ID=NZ_CAJZAS010000208.1:1..22251;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_52 NZ_CAJZAS010000208.1 RefSeq pseudogene 1 525 . + . ID=gene-LDO45_RS23185;Name=LDO45_RS23185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS23185;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000208.1 Protein Homology CDS 1 525 . + 0 ID=cds-LDO45_RS23185;Parent=gene-LDO45_RS23185;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494415.1;locus_tag=LDO45_RS23185;partial=true;product=phage tail protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000208.1 RefSeq gene 739 1767 . + . ID=gene-LDO45_RS23190;Name=LDO45_RS23190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23190;old_locus_tag=BDI4_520003 NZ_CAJZAS010000208.1 Protein Homology CDS 739 1767 . + 0 ID=cds-WP_059532842.1;Parent=gene-LDO45_RS23190;Dbxref=GenBank:WP_059532842.1;Name=WP_059532842.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753612.1;locus_tag=LDO45_RS23190;product=transporter;protein_id=WP_059532842.1;transl_table=11 NZ_CAJZAS010000208.1 RefSeq gene 1877 4045 . - . ID=gene-LDO45_RS23195;Name=LDO45_RS23195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23195;old_locus_tag=BDI4_520004 NZ_CAJZAS010000208.1 Protein Homology CDS 1877 4045 . - 0 ID=cds-WP_059532774.1;Parent=gene-LDO45_RS23195;Dbxref=GenBank:WP_059532774.1;Name=WP_059532774.1;Ontology_term=GO:0006508,GO:0008233,GO:0008235,GO:0008270,GO:0046872;gbkey=CDS;go_function=peptidase activity|0008233||IEA,metalloexopeptidase activity|0008235||IEA,zinc ion binding|0008270||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350779.1;locus_tag=LDO45_RS23195;product=M1 family metallopeptidase;protein_id=WP_059532774.1;transl_table=11 NZ_CAJZAS010000208.1 RefSeq gene 4690 5184 . + . ID=gene-LDO45_RS23200;Name=LDO45_RS23200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23200;old_locus_tag=BDI4_520005 NZ_CAJZAS010000208.1 Protein Homology CDS 4690 5184 . + 0 ID=cds-WP_059532770.1;Parent=gene-LDO45_RS23200;Dbxref=GenBank:WP_059532770.1;Name=WP_059532770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362981.1;locus_tag=LDO45_RS23200;product=LEA type 2 family protein;protein_id=WP_059532770.1;transl_table=11 NZ_CAJZAS010000208.1 RefSeq gene 5310 6443 . + . ID=gene-LDO45_RS23205;Name=LDO45_RS23205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23205;old_locus_tag=BDI4_520006 NZ_CAJZAS010000208.1 Protein Homology CDS 5310 6443 . + 0 ID=cds-WP_223963869.1;Parent=gene-LDO45_RS23205;Dbxref=GenBank:WP_223963869.1;Name=WP_223963869.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898242.1;locus_tag=LDO45_RS23205;product=class I SAM-dependent methyltransferase;protein_id=WP_223963869.1;transl_table=11 NZ_CAJZAS010000208.1 RefSeq gene 6533 7423 . + . ID=gene-LDO45_RS23210;Name=LDO45_RS23210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23210;old_locus_tag=BDI4_520007 NZ_CAJZAS010000208.1 Protein Homology CDS 6533 7423 . + 0 ID=cds-WP_223963871.1;Parent=gene-LDO45_RS23210;Dbxref=GenBank:WP_223963871.1;Name=WP_223963871.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765312.1;locus_tag=LDO45_RS23210;product=SAM-dependent methyltransferase;protein_id=WP_223963871.1;transl_table=11 NZ_CAJZAS010000208.1 RefSeq gene 7479 8051 . - . ID=gene-LDO45_RS23215;Name=LDO45_RS23215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23215;old_locus_tag=BDI4_520008 NZ_CAJZAS010000208.1 Protein Homology CDS 7479 8051 . - 0 ID=cds-WP_059532764.1;Parent=gene-LDO45_RS23215;Dbxref=GenBank:WP_059532764.1;Name=WP_059532764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333668.1;locus_tag=LDO45_RS23215;product=DUF1415 domain-containing protein;protein_id=WP_059532764.1;transl_table=11 NZ_CAJZAS010000208.1 RefSeq gene 8133 8756 . - . ID=gene-LDO45_RS23220;Name=LDO45_RS23220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23220;old_locus_tag=BDI4_520009 NZ_CAJZAS010000208.1 Protein Homology CDS 8133 8756 . - 0 ID=cds-WP_223963873.1;Parent=gene-LDO45_RS23220;Dbxref=GenBank:WP_223963873.1;Name=WP_223963873.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214227.1;locus_tag=LDO45_RS23220;product=TetR/AcrR family transcriptional regulator;protein_id=WP_223963873.1;transl_table=11 NZ_CAJZAS010000208.1 RefSeq gene 8974 10257 . + . ID=gene-LDO45_RS23225;Name=LDO45_RS23225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23225;old_locus_tag=BDI4_520010 NZ_CAJZAS010000208.1 Protein Homology CDS 8974 10257 . + 0 ID=cds-WP_223963875.1;Parent=gene-LDO45_RS23225;Dbxref=GenBank:WP_223963875.1;Name=WP_223963875.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909916.1;locus_tag=LDO45_RS23225;product=MFS transporter;protein_id=WP_223963875.1;transl_table=11 NZ_CAJZAS010000208.1 RefSeq gene 10416 11021 . + . ID=gene-LDO45_RS23230;Name=LDO45_RS23230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23230;old_locus_tag=BDI4_520011 NZ_CAJZAS010000208.1 Protein Homology CDS 10416 11021 . + 0 ID=cds-WP_059692334.1;Parent=gene-LDO45_RS23230;Dbxref=GenBank:WP_059692334.1;Name=WP_059692334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350786.1;locus_tag=LDO45_RS23230;product=nitroreductase family protein;protein_id=WP_059692334.1;transl_table=11 NZ_CAJZAS010000208.1 RefSeq gene 11274 12524 . + . ID=gene-LDO45_RS23235;Name=LDO45_RS23235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23235;old_locus_tag=BDI4_520012 NZ_CAJZAS010000208.1 Protein Homology CDS 11274 12524 . + 0 ID=cds-WP_223963877.1;Parent=gene-LDO45_RS23235;Dbxref=GenBank:WP_223963877.1;Name=WP_223963877.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414128.1;locus_tag=LDO45_RS23235;product=Hsp70 family protein;protein_id=WP_223963877.1;transl_table=11 NZ_CAJZAS010000208.1 RefSeq gene 12626 12829 . - . ID=gene-LDO45_RS23240;Name=LDO45_RS23240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23240;old_locus_tag=BDI4_520013 NZ_CAJZAS010000208.1 Protein Homology CDS 12626 12829 . - 0 ID=cds-WP_006477070.1;Parent=gene-LDO45_RS23240;Dbxref=GenBank:WP_006477070.1;Name=WP_006477070.1;Ontology_term=GO:0001072,GO:0003676,GO:0003723,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,nucleic acid binding|0003676||IEA,RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196837.1;locus_tag=LDO45_RS23240;product=cold-shock protein;protein_id=WP_006477070.1;transl_table=11 NZ_CAJZAS010000208.1 RefSeq gene 13250 14848 . + . ID=gene-LDO45_RS23245;Name=LDO45_RS23245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23245;old_locus_tag=BDI4_520015 NZ_CAJZAS010000208.1 Protein Homology CDS 13250 14848 . + 0 ID=cds-WP_059532754.1;Parent=gene-LDO45_RS23245;Dbxref=GenBank:WP_059532754.1;Name=WP_059532754.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186824.1;locus_tag=LDO45_RS23245;product=APC family permease;protein_id=WP_059532754.1;transl_table=11 NZ_CAJZAS010000208.1 RefSeq gene 14957 15748 . - . ID=gene-LDO45_RS23250;Name=LDO45_RS23250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23250;old_locus_tag=BDI4_520016 NZ_CAJZAS010000208.1 Protein Homology CDS 14957 15748 . - 0 ID=cds-WP_223963878.1;Parent=gene-LDO45_RS23250;Dbxref=GenBank:WP_223963878.1;Name=WP_223963878.1;Ontology_term=GO:0046872,GO:0051213;gbkey=CDS;go_function=metal ion binding|0046872||IEA,dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362990.1;locus_tag=LDO45_RS23250;product=class III extradiol ring-cleavage dioxygenase;protein_id=WP_223963878.1;transl_table=11 NZ_CAJZAS010000208.1 RefSeq gene 15969 16565 . - . ID=gene-LDO45_RS23255;Name=LDO45_RS23255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23255;old_locus_tag=BDI4_520017 NZ_CAJZAS010000208.1 Protein Homology CDS 15969 16565 . - 0 ID=cds-WP_059532749.1;Parent=gene-LDO45_RS23255;Dbxref=GenBank:WP_059532749.1;Name=WP_059532749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734507.1;locus_tag=LDO45_RS23255;product=UbiX family flavin prenyltransferase;protein_id=WP_059532749.1;transl_table=11 NZ_CAJZAS010000208.1 RefSeq gene 16579 16890 . - . ID=gene-LDO45_RS23260;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=LDO45_RS23260;old_locus_tag=BDI4_520018 NZ_CAJZAS010000208.1 Protein Homology CDS 16579 16890 . - 0 ID=cds-WP_011883132.1;Parent=gene-LDO45_RS23260;Dbxref=GenBank:WP_011883132.1;Name=WP_011883132.1;Ontology_term=GO:0009055;gbkey=CDS;gene=grxD;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018420101.1;locus_tag=LDO45_RS23260;product=Grx4 family monothiol glutaredoxin;protein_id=WP_011883132.1;transl_table=11 NZ_CAJZAS010000208.1 RefSeq gene 16958 17800 . - . ID=gene-LDO45_RS23265;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=LDO45_RS23265;old_locus_tag=BDI4_520019 NZ_CAJZAS010000208.1 Protein Homology CDS 16958 17800 . - 0 ID=cds-WP_223963880.1;Parent=gene-LDO45_RS23265;Dbxref=GenBank:WP_223963880.1;Name=WP_223963880.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350792.1;locus_tag=LDO45_RS23265;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_223963880.1;transl_table=11 NZ_CAJZAS010000208.1 RefSeq gene 17808 18890 . - . ID=gene-LDO45_RS23270;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=LDO45_RS23270;old_locus_tag=BDI4_520020 NZ_CAJZAS010000208.1 Protein Homology CDS 17808 18890 . - 0 ID=cds-WP_223963881.1;Parent=gene-LDO45_RS23270;Dbxref=GenBank:WP_223963881.1;Name=WP_223963881.1;Ontology_term=GO:0006415,GO:0016149;gbkey=CDS;gene=prfA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883134.1;locus_tag=LDO45_RS23270;product=peptide chain release factor 1;protein_id=WP_223963881.1;transl_table=11 NZ_CAJZAS010000208.1 RefSeq gene 18972 20270 . - . ID=gene-LDO45_RS23275;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=LDO45_RS23275;old_locus_tag=BDI4_520021 NZ_CAJZAS010000208.1 Protein Homology CDS 18972 20270 . - 0 ID=cds-WP_059465273.1;Parent=gene-LDO45_RS23275;Dbxref=GenBank:WP_059465273.1;Name=WP_059465273.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214219.1;locus_tag=LDO45_RS23275;product=glutamyl-tRNA reductase;protein_id=WP_059465273.1;transl_table=11 NZ_CAJZAS010000208.1 RefSeq gene 20297 21058 . - . ID=gene-LDO45_RS23280;Name=LDO45_RS23280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23280;old_locus_tag=BDI4_520022 NZ_CAJZAS010000208.1 Protein Homology CDS 20297 21058 . - 0 ID=cds-WP_059465274.1;Parent=gene-LDO45_RS23280;Dbxref=GenBank:WP_059465274.1;Name=WP_059465274.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755624.1;locus_tag=LDO45_RS23280;product=response regulator transcription factor;protein_id=WP_059465274.1;transl_table=11 NZ_CAJZAS010000208.1 RefSeq gene 21229 21483 . + . ID=gene-LDO45_RS23285;Name=LDO45_RS23285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23285;old_locus_tag=BDI4_520023 NZ_CAJZAS010000208.1 Protein Homology CDS 21229 21483 . + 0 ID=cds-WP_059449757.1;Parent=gene-LDO45_RS23285;Dbxref=GenBank:WP_059449757.1;Name=WP_059449757.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883137.1;locus_tag=LDO45_RS23285;product=hypothetical protein;protein_id=WP_059449757.1;transl_table=11 NZ_CAJZAS010000208.1 RefSeq gene 21502 22251 . + . ID=gene-LDO45_RS23290;Name=LDO45_RS23290;end_range=22251,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23290;partial=true NZ_CAJZAS010000208.1 Protein Homology CDS 21502 22251 . + 0 ID=cds-WP_223963882.1;Parent=gene-LDO45_RS23290;Dbxref=GenBank:WP_223963882.1;Name=WP_223963882.1;end_range=22251,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106698.1;locus_tag=LDO45_RS23290;partial=true;product=aminopeptidase P family N-terminal domain-containing protein;protein_id=WP_223963882.1;transl_table=11 ##sequence-region NZ_CAJZAS010000209.1 1 37800 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000209.1 RefSeq region 1 37800 . + . ID=NZ_CAJZAS010000209.1:1..37800;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_53 NZ_CAJZAS010000209.1 RefSeq gene 308 490 . - . ID=gene-LDO45_RS23295;Name=LDO45_RS23295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23295 NZ_CAJZAS010000209.1 GeneMarkS-2+ CDS 308 490 . - 0 ID=cds-WP_156441421.1;Parent=gene-LDO45_RS23295;Dbxref=GenBank:WP_156441421.1;Name=WP_156441421.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS23295;product=hypothetical protein;protein_id=WP_156441421.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 536 1960 . + . ID=gene-LDO45_RS23300;Name=LDO45_RS23300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23300;old_locus_tag=BDI4_530001 NZ_CAJZAS010000209.1 Protein Homology CDS 536 1960 . + 0 ID=cds-WP_059697549.1;Parent=gene-LDO45_RS23300;Dbxref=GenBank:WP_059697549.1;Name=WP_059697549.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366870.1;locus_tag=LDO45_RS23300;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_059697549.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 2217 2960 . - . ID=gene-LDO45_RS23305;Name=LDO45_RS23305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23305;old_locus_tag=BDI4_530002 NZ_CAJZAS010000209.1 Protein Homology CDS 2217 2960 . - 0 ID=cds-WP_223963883.1;Parent=gene-LDO45_RS23305;Dbxref=GenBank:WP_223963883.1;Name=WP_223963883.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758651.1;locus_tag=LDO45_RS23305;product=2OG-Fe(II) oxygenase;protein_id=WP_223963883.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 3243 4835 . - . ID=gene-LDO45_RS23310;Name=LDO45_RS23310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23310;old_locus_tag=BDI4_530003 NZ_CAJZAS010000209.1 Protein Homology CDS 3243 4835 . - 0 ID=cds-WP_223963884.1;Parent=gene-LDO45_RS23310;Dbxref=GenBank:WP_223963884.1;Name=WP_223963884.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488499.1;locus_tag=LDO45_RS23310;product=inorganic phosphate transporter;protein_id=WP_223963884.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 5059 5967 . - . ID=gene-LDO45_RS23315;Name=LDO45_RS23315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23315;old_locus_tag=BDI4_530004 NZ_CAJZAS010000209.1 Protein Homology CDS 5059 5967 . - 0 ID=cds-WP_223963885.1;Parent=gene-LDO45_RS23315;Dbxref=GenBank:WP_223963885.1;Name=WP_223963885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758655.1;locus_tag=LDO45_RS23315;product=LysR substrate-binding domain-containing protein;protein_id=WP_223963885.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 6095 8389 . + . ID=gene-LDO45_RS23320;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=LDO45_RS23320;old_locus_tag=BDI4_530005 NZ_CAJZAS010000209.1 Protein Homology CDS 6095 8389 . + 0 ID=cds-WP_223963886.1;Parent=gene-LDO45_RS23320;Dbxref=GenBank:WP_223963886.1;Name=WP_223963886.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353976.1;locus_tag=LDO45_RS23320;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_223963886.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 8542 9867 . - . ID=gene-LDO45_RS23325;Name=LDO45_RS23325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23325;old_locus_tag=BDI4_530006 NZ_CAJZAS010000209.1 Protein Homology CDS 8542 9867 . - 0 ID=cds-WP_059691637.1;Parent=gene-LDO45_RS23325;Dbxref=GenBank:WP_059691637.1;Name=WP_059691637.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353979.1;locus_tag=LDO45_RS23325;product=MFS transporter;protein_id=WP_059691637.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 9921 10877 . - . ID=gene-LDO45_RS23330;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=LDO45_RS23330;old_locus_tag=BDI4_530007 NZ_CAJZAS010000209.1 Protein Homology CDS 9921 10877 . - 0 ID=cds-WP_059682426.1;Parent=gene-LDO45_RS23330;Dbxref=GenBank:WP_059682426.1;Name=WP_059682426.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766488.1;locus_tag=LDO45_RS23330;product=agmatinase;protein_id=WP_059682426.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 11017 11928 . + . ID=gene-LDO45_RS23335;Name=LDO45_RS23335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23335;old_locus_tag=BDI4_530008 NZ_CAJZAS010000209.1 Protein Homology CDS 11017 11928 . + 0 ID=cds-WP_059532632.1;Parent=gene-LDO45_RS23335;Dbxref=GenBank:WP_059532632.1;Name=WP_059532632.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659603.1;locus_tag=LDO45_RS23335;product=LysR family transcriptional regulator;protein_id=WP_059532632.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 11997 12461 . - . ID=gene-LDO45_RS23340;Name=LDO45_RS23340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23340;old_locus_tag=BDI4_530009 NZ_CAJZAS010000209.1 Protein Homology CDS 11997 12461 . - 0 ID=cds-WP_044848788.1;Parent=gene-LDO45_RS23340;Dbxref=GenBank:WP_044848788.1;Name=WP_044848788.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188527.1;locus_tag=LDO45_RS23340;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_044848788.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 12596 13219 . + . ID=gene-LDO45_RS23345;Name=LDO45_RS23345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23345;old_locus_tag=BDI4_530010 NZ_CAJZAS010000209.1 Protein Homology CDS 12596 13219 . + 0 ID=cds-WP_223963887.1;Parent=gene-LDO45_RS23345;Dbxref=GenBank:WP_223963887.1;Name=WP_223963887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752375.1;locus_tag=LDO45_RS23345;product=LysE family translocator;protein_id=WP_223963887.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 13479 15068 . + . ID=gene-LDO45_RS23350;Name=LDO45_RS23350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23350;old_locus_tag=BDI4_530011 NZ_CAJZAS010000209.1 Protein Homology CDS 13479 15068 . + 0 ID=cds-WP_223963888.1;Parent=gene-LDO45_RS23350;Dbxref=GenBank:WP_223963888.1;Name=WP_223963888.1;Ontology_term=GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339395.1;locus_tag=LDO45_RS23350;product=protease pro-enzyme activation domain-containing protein;protein_id=WP_223963888.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 15142 16818 . + . ID=gene-LDO45_RS23355;Name=LDO45_RS23355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23355;old_locus_tag=BDI4_530012 NZ_CAJZAS010000209.1 Protein Homology CDS 15142 16818 . + 0 ID=cds-WP_223963889.1;Parent=gene-LDO45_RS23355;Dbxref=GenBank:WP_223963889.1;Name=WP_223963889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353985.1;locus_tag=LDO45_RS23355;product=S10 family peptidase;protein_id=WP_223963889.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 16897 17745 . - . ID=gene-LDO45_RS23360;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=LDO45_RS23360;old_locus_tag=BDI4_530013 NZ_CAJZAS010000209.1 Protein Homology CDS 16897 17745 . - 0 ID=cds-WP_059697561.1;Parent=gene-LDO45_RS23360;Dbxref=GenBank:WP_059697561.1;Name=WP_059697561.1;Ontology_term=GO:0009435,GO:0003952,GO:0004359,GO:0008795;gbkey=CDS;gene=nadE;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,glutaminase activity|0004359||IEA,NAD+ synthase activity|0008795||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366857.1;locus_tag=LDO45_RS23360;product=ammonia-dependent NAD(+) synthetase;protein_id=WP_059697561.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 17971 18840 . - . ID=gene-LDO45_RS23365;Name=LDO45_RS23365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23365;old_locus_tag=BDI4_530014 NZ_CAJZAS010000209.1 Protein Homology CDS 17971 18840 . - 0 ID=cds-WP_223963890.1;Parent=gene-LDO45_RS23365;Dbxref=GenBank:WP_223963890.1;Name=WP_223963890.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331232.1;locus_tag=LDO45_RS23365;product=DMT family transporter;protein_id=WP_223963890.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 19028 19213 . - . ID=gene-LDO45_RS23370;Name=LDO45_RS23370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23370 NZ_CAJZAS010000209.1 Protein Homology CDS 19028 19213 . - 0 ID=cds-WP_006752380.1;Parent=gene-LDO45_RS23370;Dbxref=GenBank:WP_006752380.1;Name=WP_006752380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853420.1;locus_tag=LDO45_RS23370;product=hypothetical protein;protein_id=WP_006752380.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 19419 20177 . + . ID=gene-LDO45_RS23375;Name=LDO45_RS23375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23375;old_locus_tag=BDI4_530016 NZ_CAJZAS010000209.1 Protein Homology CDS 19419 20177 . + 0 ID=cds-WP_059532616.1;Parent=gene-LDO45_RS23375;Dbxref=GenBank:WP_059532616.1;Name=WP_059532616.1;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546920.1;locus_tag=LDO45_RS23375;product=DeoR/GlpR family DNA-binding transcription regulator;protein_id=WP_059532616.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 20282 22108 . + . ID=gene-LDO45_RS23380;Name=LDO45_RS23380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23380;old_locus_tag=BDI4_530017 NZ_CAJZAS010000209.1 Protein Homology CDS 20282 22108 . + 0 ID=cds-WP_223963893.1;Parent=gene-LDO45_RS23380;Dbxref=GenBank:WP_223963893.1;Name=WP_223963893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216396.1;locus_tag=LDO45_RS23380;product=phospholipase D-like domain-containing protein;protein_id=WP_223963893.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 22233 22907 . - . ID=gene-LDO45_RS23385;Name=LDO45_RS23385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23385;old_locus_tag=BDI4_530018 NZ_CAJZAS010000209.1 Protein Homology CDS 22233 22907 . - 0 ID=cds-WP_059464545.1;Parent=gene-LDO45_RS23385;Dbxref=GenBank:WP_059464545.1;Name=WP_059464545.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366853.1;locus_tag=LDO45_RS23385;product=TetR family transcriptional regulator;protein_id=WP_059464545.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 23023 24291 . - . ID=gene-LDO45_RS23390;Name=LDO45_RS23390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23390;old_locus_tag=BDI4_530019 NZ_CAJZAS010000209.1 Protein Homology CDS 23023 24291 . - 0 ID=cds-WP_059691633.1;Parent=gene-LDO45_RS23390;Dbxref=GenBank:WP_059691633.1;Name=WP_059691633.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898382.1;locus_tag=LDO45_RS23390;product=FAD-binding oxidoreductase;protein_id=WP_059691633.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 24427 26007 . - . ID=gene-LDO45_RS23395;Name=LDO45_RS23395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23395;old_locus_tag=BDI4_530020 NZ_CAJZAS010000209.1 Protein Homology CDS 24427 26007 . - 0 ID=cds-WP_223963894.1;Parent=gene-LDO45_RS23395;Dbxref=GenBank:WP_223963894.1;Name=WP_223963894.1;Ontology_term=GO:0006865;gbkey=CDS;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898383.1;locus_tag=LDO45_RS23395;product=amino acid permease;protein_id=WP_223963894.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 26671 28182 . + . ID=gene-LDO45_RS23400;Name=LDO45_RS23400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23400;old_locus_tag=BDI4_530021 NZ_CAJZAS010000209.1 Protein Homology CDS 26671 28182 . + 0 ID=cds-WP_059532606.1;Parent=gene-LDO45_RS23400;Dbxref=GenBank:WP_059532606.1;Name=WP_059532606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880871.1;locus_tag=LDO45_RS23400;product=aldehyde dehydrogenase family protein;protein_id=WP_059532606.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 28315 30774 . - . ID=gene-LDO45_RS23405;Name=LDO45_RS23405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23405;old_locus_tag=BDI4_530022 NZ_CAJZAS010000209.1 Protein Homology CDS 28315 30774 . - 0 ID=cds-WP_223963896.1;Parent=gene-LDO45_RS23405;Dbxref=GenBank:WP_223963896.1;Name=WP_223963896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724048.1;locus_tag=LDO45_RS23405;product=DUF3772 domain-containing protein;protein_id=WP_223963896.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 31200 32618 . + . ID=gene-LDO45_RS23410;Name=LDO45_RS23410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23410;old_locus_tag=BDI4_530023 NZ_CAJZAS010000209.1 Protein Homology CDS 31200 32618 . + 0 ID=cds-WP_059697576.1;Parent=gene-LDO45_RS23410;Dbxref=GenBank:WP_059697576.1;Name=WP_059697576.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353995.1;locus_tag=LDO45_RS23410;product=MFS transporter;protein_id=WP_059697576.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 32887 34068 . + . ID=gene-LDO45_RS23415;Name=LDO45_RS23415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23415;old_locus_tag=BDI4_530025 NZ_CAJZAS010000209.1 Protein Homology CDS 32887 34068 . + 0 ID=cds-WP_223963898.1;Parent=gene-LDO45_RS23415;Dbxref=GenBank:WP_223963898.1;Name=WP_223963898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495134.1;locus_tag=LDO45_RS23415;product=hypothetical protein;protein_id=WP_223963898.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 34106 34321 . - . ID=gene-LDO45_RS23420;Name=LDO45_RS23420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23420 NZ_CAJZAS010000209.1 GeneMarkS-2+ CDS 34106 34321 . - 0 ID=cds-WP_223963900.1;Parent=gene-LDO45_RS23420;Dbxref=GenBank:WP_223963900.1;Name=WP_223963900.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS23420;product=hypothetical protein;protein_id=WP_223963900.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 34352 36550 . - . ID=gene-LDO45_RS23425;Name=LDO45_RS23425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23425;old_locus_tag=BDI4_530026 NZ_CAJZAS010000209.1 Protein Homology CDS 34352 36550 . - 0 ID=cds-WP_223963902.1;Parent=gene-LDO45_RS23425;Dbxref=GenBank:WP_223963902.1;Name=WP_223963902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753731.1;locus_tag=LDO45_RS23425;product=penicillin-binding protein 1A;protein_id=WP_223963902.1;transl_table=11 NZ_CAJZAS010000209.1 RefSeq gene 36648 37800 . - . ID=gene-LDO45_RS23430;Name=LDO45_RS23430;end_range=37800,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23430;old_locus_tag=BDI4_530027;partial=true NZ_CAJZAS010000209.1 Protein Homology CDS 36648 37800 . - 1 ID=cds-WP_223963903.1;Parent=gene-LDO45_RS23430;Dbxref=GenBank:WP_223963903.1;Name=WP_223963903.1;Ontology_term=GO:0030170;end_range=37800,.;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898396.1;locus_tag=LDO45_RS23430;partial=true;product=PLP-dependent aminotransferase family protein;protein_id=WP_223963903.1;transl_table=11 ##sequence-region NZ_CAJZAS010000210.1 1 19950 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000210.1 RefSeq region 1 19950 . + . ID=NZ_CAJZAS010000210.1:1..19950;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_54 NZ_CAJZAS010000210.1 RefSeq gene 1 1684 . - . ID=gene-LDO45_RS23435;Name=LDO45_RS23435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23435;partial=true;start_range=.,1 NZ_CAJZAS010000210.1 Protein Homology CDS 1 1684 . - 0 ID=cds-WP_290371031.1;Parent=gene-LDO45_RS23435;Dbxref=GenBank:WP_290371031.1;Name=WP_290371031.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017472.5;locus_tag=LDO45_RS23435;partial=true;product=ESPR-type extended signal peptide-containing protein;protein_id=WP_290371031.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000210.1 RefSeq gene 2231 2563 . + . ID=gene-LDO45_RS23440;Name=LDO45_RS23440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23440 NZ_CAJZAS010000210.1 GeneMarkS-2+ CDS 2231 2563 . + 0 ID=cds-WP_223963906.1;Parent=gene-LDO45_RS23440;Dbxref=GenBank:WP_223963906.1;Name=WP_223963906.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS23440;product=hypothetical protein;protein_id=WP_223963906.1;transl_table=11 NZ_CAJZAS010000210.1 RefSeq gene 2813 3139 . - . ID=gene-LDO45_RS23445;Name=LDO45_RS23445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23445;old_locus_tag=BDI4_540008 NZ_CAJZAS010000210.1 Protein Homology CDS 2813 3139 . - 0 ID=cds-WP_223963908.1;Parent=gene-LDO45_RS23445;Dbxref=GenBank:WP_223963908.1;Name=WP_223963908.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009967440.1;locus_tag=LDO45_RS23445;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_223963908.1;transl_table=11 NZ_CAJZAS010000210.1 RefSeq pseudogene 3922 4921 . + . ID=gene-LDO45_RS23450;Name=LDO45_RS23450;end_range=4921,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS23450;partial=true;pseudo=true NZ_CAJZAS010000210.1 Protein Homology CDS 3922 4921 . + 0 ID=cds-LDO45_RS23450;Parent=gene-LDO45_RS23450;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=4921,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543143.1;locus_tag=LDO45_RS23450;partial=true;product=IS110 family transposase;pseudo=true;transl_table=11 NZ_CAJZAS010000210.1 RefSeq pseudogene 5097 5514 . - . ID=gene-LDO45_RS23455;Name=LDO45_RS23455;end_range=5514,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS23455;old_locus_tag=BDI4_540011;partial=true;pseudo=true NZ_CAJZAS010000210.1 Protein Homology CDS 5097 5514 . - 0 ID=cds-LDO45_RS23455;Parent=gene-LDO45_RS23455;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=5514,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611267.1;locus_tag=LDO45_RS23455;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CAJZAS010000210.1 RefSeq gene 5699 7378 . - . ID=gene-LDO45_RS23460;Name=LDO45_RS23460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23460;old_locus_tag=BDI4_540012 NZ_CAJZAS010000210.1 Protein Homology CDS 5699 7378 . - 0 ID=cds-WP_223963909.1;Parent=gene-LDO45_RS23460;Dbxref=GenBank:WP_223963909.1;Name=WP_223963909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010120786.1;locus_tag=LDO45_RS23460;product=phosphodiester glycosidase family protein;protein_id=WP_223963909.1;transl_table=11 NZ_CAJZAS010000210.1 RefSeq pseudogene 7591 8170 . + . ID=gene-LDO45_RS23465;Name=LDO45_RS23465;end_range=8170,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS23465;old_locus_tag=BDI4_540015;partial=true;pseudo=true NZ_CAJZAS010000210.1 Protein Homology CDS 7591 8170 . + 0 ID=cds-LDO45_RS23465;Parent=gene-LDO45_RS23465;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;end_range=8170,.;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611267.1;locus_tag=LDO45_RS23465;partial=true;product=IS5 family transposase;pseudo=true;transl_table=11 NZ_CAJZAS010000210.1 RefSeq gene 8764 9081 . - . ID=gene-LDO45_RS23470;Name=LDO45_RS23470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23470;old_locus_tag=BDI4_540016 NZ_CAJZAS010000210.1 Protein Homology CDS 8764 9081 . - 0 ID=cds-WP_223963911.1;Parent=gene-LDO45_RS23470;Dbxref=GenBank:WP_223963911.1;Name=WP_223963911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013592228.1;locus_tag=LDO45_RS23470;product=hypothetical protein;protein_id=WP_223963911.1;transl_table=11 NZ_CAJZAS010000210.1 RefSeq gene 9532 12033 . - . ID=gene-LDO45_RS23475;Name=LDO45_RS23475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23475;old_locus_tag=BDI4_540017 NZ_CAJZAS010000210.1 Protein Homology CDS 9532 12033 . - 0 ID=cds-WP_223963913.1;Parent=gene-LDO45_RS23475;Dbxref=GenBank:WP_223963913.1;Name=WP_223963913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008349973.1;locus_tag=LDO45_RS23475;product=penicillin-binding protein 1A;protein_id=WP_223963913.1;transl_table=11 NZ_CAJZAS010000210.1 RefSeq gene 12033 13532 . - . ID=gene-LDO45_RS23480;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=LDO45_RS23480;old_locus_tag=BDI4_540018 NZ_CAJZAS010000210.1 Protein Homology CDS 12033 13532 . - 0 ID=cds-WP_374109547.1;Parent=gene-LDO45_RS23480;Dbxref=GenBank:WP_374109547.1;Name=WP_374109547.1;Ontology_term=GO:0009252,GO:0004175,GO:0009002;gbkey=CDS;gene=dacB;go_function=endopeptidase activity|0004175||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335503.1;locus_tag=LDO45_RS23480;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase;protein_id=WP_374109547.1;transl_table=11 NZ_CAJZAS010000210.1 RefSeq gene 14003 14563 . - . ID=gene-LDO45_RS34625;Name=LDO45_RS34625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34625;old_locus_tag=BDI4_540019 NZ_CAJZAS010000210.1 Protein Homology CDS 14003 14563 . - 0 ID=cds-WP_374109548.1;Parent=gene-LDO45_RS34625;Dbxref=GenBank:WP_374109548.1;Name=WP_374109548.1;Ontology_term=GO:0006508,GO:0008233,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF013073.5;locus_tag=LDO45_RS34625;product=C40 family peptidase;protein_id=WP_374109548.1;transl_table=11 NZ_CAJZAS010000210.1 RefSeq gene 14639 15394 . - . ID=gene-LDO45_RS23490;Name=LDO45_RS23490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23490;old_locus_tag=BDI4_540021 NZ_CAJZAS010000210.1 Protein Homology CDS 14639 15394 . - 0 ID=cds-WP_223963917.1;Parent=gene-LDO45_RS23490;Dbxref=GenBank:WP_223963917.1;Name=WP_223963917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881692.1;locus_tag=LDO45_RS23490;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_223963917.1;transl_table=11 NZ_CAJZAS010000210.1 RefSeq gene 17709 18383 . + . ID=gene-LDO45_RS23495;Name=LDO45_RS23495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23495;old_locus_tag=BDI4_540024 NZ_CAJZAS010000210.1 GeneMarkS-2+ CDS 17709 18383 . + 0 ID=cds-WP_223963919.1;Parent=gene-LDO45_RS23495;Dbxref=GenBank:WP_223963919.1;Name=WP_223963919.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS23495;product=class I SAM-dependent methyltransferase;protein_id=WP_223963919.1;transl_table=11 NZ_CAJZAS010000210.1 RefSeq pseudogene 18837 19022 . - . ID=gene-LDO45_RS23500;Name=LDO45_RS23500;end_range=19022,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS23500;partial=true;pseudo=true;start_range=.,18837 NZ_CAJZAS010000210.1 Protein Homology CDS 18837 19022 . - 0 ID=cds-LDO45_RS23500;Parent=gene-LDO45_RS23500;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=19022,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611495.1;locus_tag=LDO45_RS23500;partial=true;product=IS3 family transposase;pseudo=true;start_range=.,18837;transl_table=11 NZ_CAJZAS010000210.1 RefSeq gene 19325 19950 . - . ID=gene-LDO45_RS23510;Name=LDO45_RS23510;end_range=19950,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23510;old_locus_tag=BDI4_540027;partial=true NZ_CAJZAS010000210.1 Protein Homology CDS 19325 19950 . - 2 ID=cds-WP_223963921.1;Parent=gene-LDO45_RS23510;Dbxref=GenBank:WP_223963921.1;Name=WP_223963921.1;end_range=19950,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480553.1;locus_tag=LDO45_RS23510;partial=true;product=DUF2827 family protein;protein_id=WP_223963921.1;transl_table=11 ##sequence-region NZ_CAJZAS010000211.1 1 18105 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000211.1 RefSeq region 1 18105 . + . ID=NZ_CAJZAS010000211.1:1..18105;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_55 NZ_CAJZAS010000211.1 RefSeq gene 79 154 . + . ID=gene-LDO45_RS23515;Name=LDO45_RS23515;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS23515;old_locus_tag=BDI4_TRNA18 NZ_CAJZAS010000211.1 tRNAscan-SE tRNA 79 154 . + . ID=rna-LDO45_RS23515;Parent=gene-LDO45_RS23515;anticodon=(pos:112..114);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS23515;product=tRNA-Trp NZ_CAJZAS010000211.1 tRNAscan-SE exon 79 154 . + . ID=exon-LDO45_RS23515-1;Parent=rna-LDO45_RS23515;anticodon=(pos:112..114);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS23515;product=tRNA-Trp NZ_CAJZAS010000211.1 RefSeq gene 197 577 . + . ID=gene-LDO45_RS23520;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=LDO45_RS23520;old_locus_tag=BDI4_550001 NZ_CAJZAS010000211.1 Protein Homology CDS 197 577 . + 0 ID=cds-WP_059535562.1;Parent=gene-LDO45_RS23520;Dbxref=GenBank:WP_059535562.1;Name=WP_059535562.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734344.1;locus_tag=LDO45_RS23520;product=preprotein translocase subunit SecE;protein_id=WP_059535562.1;transl_table=11 NZ_CAJZAS010000211.1 RefSeq gene 579 1136 . + . ID=gene-LDO45_RS23525;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=LDO45_RS23525;old_locus_tag=BDI4_550002 NZ_CAJZAS010000211.1 Protein Homology CDS 579 1136 . + 0 ID=cds-WP_006400672.1;Parent=gene-LDO45_RS23525;Dbxref=GenBank:WP_006400672.1;Name=WP_006400672.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013434764.1;locus_tag=LDO45_RS23525;product=transcription termination/antitermination protein NusG;protein_id=WP_006400672.1;transl_table=11 NZ_CAJZAS010000211.1 RefSeq gene 1277 1708 . + . ID=gene-LDO45_RS23530;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=LDO45_RS23530;old_locus_tag=BDI4_550003 NZ_CAJZAS010000211.1 Protein Homology CDS 1277 1708 . + 0 ID=cds-WP_006400671.1;Parent=gene-LDO45_RS23530;Dbxref=GenBank:WP_006400671.1;Name=WP_006400671.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012251786.1;locus_tag=LDO45_RS23530;product=50S ribosomal protein L11;protein_id=WP_006400671.1;transl_table=11 NZ_CAJZAS010000211.1 RefSeq gene 1709 2407 . + . ID=gene-LDO45_RS23535;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=LDO45_RS23535;old_locus_tag=BDI4_550004 NZ_CAJZAS010000211.1 Protein Homology CDS 1709 2407 . + 0 ID=cds-WP_059535563.1;Parent=gene-LDO45_RS23535;Dbxref=GenBank:WP_059535563.1;Name=WP_059535563.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407020.1;locus_tag=LDO45_RS23535;product=50S ribosomal protein L1;protein_id=WP_059535563.1;transl_table=11 NZ_CAJZAS010000211.1 RefSeq gene 2716 3213 . + . ID=gene-LDO45_RS23540;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=LDO45_RS23540;old_locus_tag=BDI4_550005 NZ_CAJZAS010000211.1 Protein Homology CDS 2716 3213 . + 0 ID=cds-WP_038715103.1;Parent=gene-LDO45_RS23540;Dbxref=GenBank:WP_038715103.1;Name=WP_038715103.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898361.1;locus_tag=LDO45_RS23540;product=50S ribosomal protein L10;protein_id=WP_038715103.1;transl_table=11 NZ_CAJZAS010000211.1 RefSeq gene 3277 3651 . + . ID=gene-LDO45_RS23545;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=LDO45_RS23545;old_locus_tag=BDI4_550006 NZ_CAJZAS010000211.1 Protein Homology CDS 3277 3651 . + 0 ID=cds-WP_021161757.1;Parent=gene-LDO45_RS23545;Dbxref=GenBank:WP_021161757.1;Name=WP_021161757.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029839.1;locus_tag=LDO45_RS23545;product=50S ribosomal protein L7/L12;protein_id=WP_021161757.1;transl_table=11 NZ_CAJZAS010000211.1 RefSeq gene 4029 8135 . + . ID=gene-LDO45_RS23550;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=LDO45_RS23550;old_locus_tag=BDI4_550007 NZ_CAJZAS010000211.1 Protein Homology CDS 4029 8135 . + 0 ID=cds-WP_059535566.1;Parent=gene-LDO45_RS23550;Dbxref=GenBank:WP_059535566.1;Name=WP_059535566.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029840.1;locus_tag=LDO45_RS23550;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_059535566.1;transl_table=11 NZ_CAJZAS010000211.1 RefSeq gene 8157 12398 . + . ID=gene-LDO45_RS23555;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=LDO45_RS23555;old_locus_tag=BDI4_550008 NZ_CAJZAS010000211.1 Protein Homology CDS 8157 12398 . + 0 ID=cds-WP_059535568.1;Parent=gene-LDO45_RS23555;Dbxref=GenBank:WP_059535568.1;Name=WP_059535568.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493357.1;locus_tag=LDO45_RS23555;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_059535568.1;transl_table=11 NZ_CAJZAS010000211.1 RefSeq gene 12641 14488 . + . ID=gene-LDO45_RS23560;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=LDO45_RS23560;old_locus_tag=BDI4_550009 NZ_CAJZAS010000211.1 Protein Homology CDS 12641 14488 . + 0 ID=cds-WP_059535570.1;Parent=gene-LDO45_RS23560;Dbxref=GenBank:WP_059535570.1;Name=WP_059535570.1;Ontology_term=GO:0006310,GO:0009432,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696366.1;locus_tag=LDO45_RS23560;product=DNA helicase RecQ;protein_id=WP_059535570.1;transl_table=11 NZ_CAJZAS010000211.1 RefSeq gene 14716 15096 . + . ID=gene-LDO45_RS23565;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=LDO45_RS23565;old_locus_tag=BDI4_550010 NZ_CAJZAS010000211.1 Protein Homology CDS 14716 15096 . + 0 ID=cds-WP_006400662.1;Parent=gene-LDO45_RS23565;Dbxref=GenBank:WP_006400662.1;Name=WP_006400662.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006998493.1;locus_tag=LDO45_RS23565;product=30S ribosomal protein S12;protein_id=WP_006400662.1;transl_table=11 NZ_CAJZAS010000211.1 RefSeq gene 15269 15739 . + . ID=gene-LDO45_RS23570;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=LDO45_RS23570;old_locus_tag=BDI4_550011 NZ_CAJZAS010000211.1 Protein Homology CDS 15269 15739 . + 0 ID=cds-WP_034209730.1;Parent=gene-LDO45_RS23570;Dbxref=GenBank:WP_034209730.1;Name=WP_034209730.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008649176.1;locus_tag=LDO45_RS23570;product=30S ribosomal protein S7;protein_id=WP_034209730.1;transl_table=11 NZ_CAJZAS010000211.1 RefSeq gene 15863 17965 . + . ID=gene-LDO45_RS23575;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=LDO45_RS23575;old_locus_tag=BDI4_550012 NZ_CAJZAS010000211.1 Protein Homology CDS 15863 17965 . + 0 ID=cds-WP_059535572.1;Parent=gene-LDO45_RS23575;Dbxref=GenBank:WP_059535572.1;Name=WP_059535572.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482929.1;locus_tag=LDO45_RS23575;product=elongation factor G;protein_id=WP_059535572.1;transl_table=11 NZ_CAJZAS010000211.1 RefSeq gene 18007 18105 . + . ID=gene-LDO45_RS23580;Name=LDO45_RS23580;end_range=18105,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23580;partial=true NZ_CAJZAS010000211.1 Protein Homology CDS 18007 18105 . + 0 ID=cds-WP_208457775.1;Parent=gene-LDO45_RS23580;Dbxref=GenBank:WP_208457775.1;Name=WP_208457775.1;Ontology_term=GO:0003924,GO:0005525;end_range=18105,.;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011286074.1;locus_tag=LDO45_RS23580;partial=true;product=GTP-binding protein;protein_id=WP_208457775.1;transl_table=11 ##sequence-region NZ_CAJZAS010000212.1 1 147063 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000212.1 RefSeq region 1 147063 . + . ID=NZ_CAJZAS010000212.1:1..147063;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_56 NZ_CAJZAS010000212.1 RefSeq gene 1 1978 . + . ID=gene-LDO45_RS23585;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=LDO45_RS23585;old_locus_tag=BDI4_560001;partial=true;start_range=.,1 NZ_CAJZAS010000212.1 Protein Homology CDS 1 1978 . + 1 ID=cds-WP_223963925.1;Parent=gene-LDO45_RS23585;Dbxref=GenBank:WP_223963925.1;Name=WP_223963925.1;Ontology_term=GO:0009401,GO:0008965;gbkey=CDS;gene=ptsP;go_function=phosphoenolpyruvate-protein phosphotransferase activity|0008965||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546260.1;locus_tag=LDO45_RS23585;partial=true;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_223963925.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 2065 3816 . + . ID=gene-LDO45_RS23590;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=LDO45_RS23590;old_locus_tag=BDI4_560002 NZ_CAJZAS010000212.1 Protein Homology CDS 2065 3816 . + 0 ID=cds-WP_223963927.1;Parent=gene-LDO45_RS23590;Dbxref=GenBank:WP_223963927.1;Name=WP_223963927.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212677.1;locus_tag=LDO45_RS23590;product=N-acetylglucosamine-specific PTS transporter subunit IIBC;protein_id=WP_223963927.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 3991 6474 . - . ID=gene-LDO45_RS23595;Name=LDO45_RS23595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23595;old_locus_tag=BDI4_560003 NZ_CAJZAS010000212.1 Protein Homology CDS 3991 6474 . - 0 ID=cds-WP_223963930.1;Parent=gene-LDO45_RS23595;Dbxref=GenBank:WP_223963930.1;Name=WP_223963930.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006499030.1;locus_tag=LDO45_RS23595;product=family 20 glycosylhydrolase;protein_id=WP_223963930.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 7036 7158 . - . ID=gene-LDO45_RS23600;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=LDO45_RS23600;old_locus_tag=BDI4_560005 NZ_CAJZAS010000212.1 Protein Homology CDS 7036 7158 . - 0 ID=cds-WP_223963932.1;Parent=gene-LDO45_RS23600;Dbxref=GenBank:WP_223963932.1;Name=WP_223963932.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895987.1;locus_tag=LDO45_RS23600;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_223963932.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 7213 8349 . - . ID=gene-LDO45_RS23605;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=LDO45_RS23605;old_locus_tag=BDI4_560006 NZ_CAJZAS010000212.1 Protein Homology CDS 7213 8349 . - 0 ID=cds-WP_059526145.1;Parent=gene-LDO45_RS23605;Dbxref=GenBank:WP_059526145.1;Name=WP_059526145.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010101549.1;locus_tag=LDO45_RS23605;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_059526145.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 8381 9961 . - . ID=gene-LDO45_RS23610;Name=LDO45_RS23610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23610;old_locus_tag=BDI4_560007 NZ_CAJZAS010000212.1 Protein Homology CDS 8381 9961 . - 0 ID=cds-WP_223963933.1;Parent=gene-LDO45_RS23610;Dbxref=GenBank:WP_223963933.1;Name=WP_223963933.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212679.1;locus_tag=LDO45_RS23610;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_223963933.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 9951 10229 . - . ID=gene-LDO45_RS23615;Name=cydP;gbkey=Gene;gene=cydP;gene_biotype=protein_coding;locus_tag=LDO45_RS23615;old_locus_tag=BDI4_560008 NZ_CAJZAS010000212.1 Protein Homology CDS 9951 10229 . - 0 ID=cds-WP_059526138.1;Parent=gene-LDO45_RS23615;Dbxref=GenBank:WP_059526138.1;Name=WP_059526138.1;gbkey=CDS;gene=cydP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414477.1;locus_tag=LDO45_RS23615;product=cytochrome oxidase putative small subunit CydP;protein_id=WP_059526138.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 10558 11493 . - . ID=gene-LDO45_RS23620;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=LDO45_RS23620;old_locus_tag=BDI4_560009 NZ_CAJZAS010000212.1 Protein Homology CDS 10558 11493 . - 0 ID=cds-WP_059691452.1;Parent=gene-LDO45_RS23620;Dbxref=GenBank:WP_059691452.1;Name=WP_059691452.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893111.1;locus_tag=LDO45_RS23620;product=RNA polymerase sigma factor RpoH;protein_id=WP_059691452.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 11855 12424 . + . ID=gene-LDO45_RS23625;Name=LDO45_RS23625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23625;old_locus_tag=BDI4_560010 NZ_CAJZAS010000212.1 Protein Homology CDS 11855 12424 . + 0 ID=cds-WP_059526132.1;Parent=gene-LDO45_RS23625;Dbxref=GenBank:WP_059526132.1;Name=WP_059526132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483740.1;locus_tag=LDO45_RS23625;product=acyloxyacyl hydrolase;protein_id=WP_059526132.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 12470 12853 . + . ID=gene-LDO45_RS23630;Name=LDO45_RS23630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23630;old_locus_tag=BDI4_560011 NZ_CAJZAS010000212.1 Protein Homology CDS 12470 12853 . + 0 ID=cds-WP_059526129.1;Parent=gene-LDO45_RS23630;Dbxref=GenBank:WP_059526129.1;Name=WP_059526129.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723676.1;locus_tag=LDO45_RS23630;product=nuclear transport factor 2 family protein;protein_id=WP_059526129.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 12997 14643 . - . ID=gene-LDO45_RS23635;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=LDO45_RS23635;old_locus_tag=BDI4_560012 NZ_CAJZAS010000212.1 Protein Homology CDS 12997 14643 . - 0 ID=cds-WP_223963935.1;Parent=gene-LDO45_RS23635;Dbxref=GenBank:WP_223963935.1;Name=WP_223963935.1;Ontology_term=GO:0009098,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: protein motif:HMM:TIGR00970.1;locus_tag=LDO45_RS23635;product=2-isopropylmalate synthase;protein_id=WP_223963935.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 15037 16011 . - . ID=gene-LDO45_RS23640;Name=ybiB;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=LDO45_RS23640;old_locus_tag=BDI4_560013 NZ_CAJZAS010000212.1 Protein Homology CDS 15037 16011 . - 0 ID=cds-WP_223963937.1;Parent=gene-LDO45_RS23640;Dbxref=GenBank:WP_223963937.1;Name=WP_223963937.1;gbkey=CDS;gene=ybiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760403.1;locus_tag=LDO45_RS23640;product=DNA-binding protein YbiB;protein_id=WP_223963937.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 16185 16829 . + . ID=gene-LDO45_RS23645;Name=maiA;gbkey=Gene;gene=maiA;gene_biotype=protein_coding;locus_tag=LDO45_RS23645;old_locus_tag=BDI4_560014 NZ_CAJZAS010000212.1 Protein Homology CDS 16185 16829 . + 0 ID=cds-WP_059819807.1;Parent=gene-LDO45_RS23645;Dbxref=GenBank:WP_059819807.1;Name=WP_059819807.1;Ontology_term=GO:0006559,GO:0006572,GO:0016034,GO:0005737;gbkey=CDS;gene=maiA;go_component=cytoplasm|0005737||IEA;go_function=maleylacetoacetate isomerase activity|0016034||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009902749.1;locus_tag=LDO45_RS23645;product=maleylacetoacetate isomerase;protein_id=WP_059819807.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 16924 18084 . - . ID=gene-LDO45_RS23650;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=LDO45_RS23650;old_locus_tag=BDI4_560015 NZ_CAJZAS010000212.1 Protein Homology CDS 16924 18084 . - 0 ID=cds-WP_223963938.1;Parent=gene-LDO45_RS23650;Dbxref=GenBank:WP_223963938.1;Name=WP_223963938.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416170.1;locus_tag=LDO45_RS23650;product=signal recognition particle-docking protein FtsY;protein_id=WP_223963938.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 18287 18901 . + . ID=gene-LDO45_RS23655;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=LDO45_RS23655;old_locus_tag=BDI4_560016 NZ_CAJZAS010000212.1 Protein Homology CDS 18287 18901 . + 0 ID=cds-WP_223963940.1;Parent=gene-LDO45_RS23655;Dbxref=GenBank:WP_223963940.1;Name=WP_223963940.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601291.1;locus_tag=LDO45_RS23655;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=WP_223963940.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 19013 19510 . + . ID=gene-LDO45_RS23660;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=LDO45_RS23660;old_locus_tag=BDI4_560017 NZ_CAJZAS010000212.1 Protein Homology CDS 19013 19510 . + 0 ID=cds-WP_006398238.1;Parent=gene-LDO45_RS23660;Dbxref=GenBank:WP_006398238.1;Name=WP_006398238.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195249.1;locus_tag=LDO45_RS23660;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_006398238.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 19570 19836 . + . ID=gene-LDO45_RS23665;Name=LDO45_RS23665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23665;old_locus_tag=BDI4_560018 NZ_CAJZAS010000212.1 Protein Homology CDS 19570 19836 . + 0 ID=cds-WP_175909339.1;Parent=gene-LDO45_RS23665;Dbxref=GenBank:WP_175909339.1;Name=WP_175909339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760398.1;locus_tag=LDO45_RS23665;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_175909339.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 19912 20979 . - . ID=gene-LDO45_RS23670;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=LDO45_RS23670;old_locus_tag=BDI4_560019 NZ_CAJZAS010000212.1 Protein Homology CDS 19912 20979 . - 0 ID=cds-WP_223963942.1;Parent=gene-LDO45_RS23670;Dbxref=GenBank:WP_223963942.1;Name=WP_223963942.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212697.1;locus_tag=LDO45_RS23670;product=histidinol-phosphate transaminase;protein_id=WP_223963942.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 21109 21708 . - . ID=gene-LDO45_RS23675;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=LDO45_RS23675;old_locus_tag=BDI4_560020 NZ_CAJZAS010000212.1 Protein Homology CDS 21109 21708 . - 0 ID=cds-WP_059526108.1;Parent=gene-LDO45_RS23675;Dbxref=GenBank:WP_059526108.1;Name=WP_059526108.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=aminoacyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753283.1;locus_tag=LDO45_RS23675;product=aminoacyl-tRNA hydrolase;protein_id=WP_059526108.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 21829 22437 . - . ID=gene-LDO45_RS23680;Name=LDO45_RS23680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23680;old_locus_tag=BDI4_560022 NZ_CAJZAS010000212.1 Protein Homology CDS 21829 22437 . - 0 ID=cds-WP_059526288.1;Parent=gene-LDO45_RS23680;Dbxref=GenBank:WP_059526288.1;Name=WP_059526288.1;Ontology_term=GO:0006412,GO:0003735,GO:0008097;gbkey=CDS;go_function=structural constituent of ribosome|0003735||IEA,5S rRNA binding|0008097||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353236.1;locus_tag=LDO45_RS23680;product=50S ribosomal protein L25/general stress protein Ctc;protein_id=WP_059526288.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 22600 23562 . - . ID=gene-LDO45_RS23685;Name=LDO45_RS23685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23685;old_locus_tag=BDI4_560023 NZ_CAJZAS010000212.1 Protein Homology CDS 22600 23562 . - 0 ID=cds-WP_059526106.1;Parent=gene-LDO45_RS23685;Dbxref=GenBank:WP_059526106.1;Name=WP_059526106.1;Ontology_term=GO:0006015,GO:0009156,GO:0009165,GO:0016310,GO:0000287,GO:0004749,GO:0005524,GO:0016301,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,ribose phosphate diphosphokinase activity|0004749||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA,ribonucleoside monophosphate biosynthetic process|0009156||IEA,nucleotide biosynthetic process|0009165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753281.1;locus_tag=LDO45_RS23685;product=ribose-phosphate pyrophosphokinase;protein_id=WP_059526106.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 23607 23683 . - . ID=gene-LDO45_RS23690;Name=LDO45_RS23690;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS23690;old_locus_tag=BDI4_TRNA36 NZ_CAJZAS010000212.1 tRNAscan-SE tRNA 23607 23683 . - . ID=rna-LDO45_RS23690;Parent=gene-LDO45_RS23690;anticodon=(pos:complement(23647..23649));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS23690;product=tRNA-Gln NZ_CAJZAS010000212.1 tRNAscan-SE exon 23607 23683 . - . ID=exon-LDO45_RS23690-1;Parent=rna-LDO45_RS23690;anticodon=(pos:complement(23647..23649));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS23690;product=tRNA-Gln NZ_CAJZAS010000212.1 RefSeq gene 23737 24618 . - . ID=gene-LDO45_RS23695;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=LDO45_RS23695;old_locus_tag=BDI4_560024 NZ_CAJZAS010000212.1 Protein Homology CDS 23737 24618 . - 0 ID=cds-WP_059691458.1;Parent=gene-LDO45_RS23695;Dbxref=GenBank:WP_059691458.1;Name=WP_059691458.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600162.1;locus_tag=LDO45_RS23695;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_059691458.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 24646 25266 . - . ID=gene-LDO45_RS23700;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=LDO45_RS23700;old_locus_tag=BDI4_560025 NZ_CAJZAS010000212.1 Protein Homology CDS 24646 25266 . - 0 ID=cds-WP_223963944.1;Parent=gene-LDO45_RS23700;Dbxref=GenBank:WP_223963944.1;Name=WP_223963944.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415468.1;locus_tag=LDO45_RS23700;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_223963944.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 25266 27089 . - . ID=gene-LDO45_RS23705;Name=LDO45_RS23705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23705;old_locus_tag=BDI4_560026 NZ_CAJZAS010000212.1 Protein Homology CDS 25266 27089 . - 0 ID=cds-WP_059691460.1;Parent=gene-LDO45_RS23705;Dbxref=GenBank:WP_059691460.1;Name=WP_059691460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006415510.1;locus_tag=LDO45_RS23705;product=tetratricopeptide repeat protein;protein_id=WP_059691460.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 27176 28003 . + . ID=gene-LDO45_RS23710;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=LDO45_RS23710;old_locus_tag=BDI4_560027 NZ_CAJZAS010000212.1 Protein Homology CDS 27176 28003 . + 0 ID=cds-WP_059526099.1;Parent=gene-LDO45_RS23710;Dbxref=GenBank:WP_059526099.1;Name=WP_059526099.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012431652.1;locus_tag=LDO45_RS23710;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_059526099.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 28041 29147 . + . ID=gene-LDO45_RS23715;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=LDO45_RS23715;old_locus_tag=BDI4_560028 NZ_CAJZAS010000212.1 Protein Homology CDS 28041 29147 . + 0 ID=cds-WP_223963946.1;Parent=gene-LDO45_RS23715;Dbxref=GenBank:WP_223963946.1;Name=WP_223963946.1;Ontology_term=GO:0006284,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009972864.1;locus_tag=LDO45_RS23715;product=A/G-specific adenine glycosylase;protein_id=WP_223963946.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 29267 29902 . - . ID=gene-LDO45_RS23720;Name=LDO45_RS23720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23720;old_locus_tag=BDI4_560029 NZ_CAJZAS010000212.1 Protein Homology CDS 29267 29902 . - 0 ID=cds-WP_059526095.1;Parent=gene-LDO45_RS23720;Dbxref=GenBank:WP_059526095.1;Name=WP_059526095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600699.1;locus_tag=LDO45_RS23720;product=LON peptidase substrate-binding domain-containing protein;protein_id=WP_059526095.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 29929 30837 . - . ID=gene-LDO45_RS23725;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=LDO45_RS23725;old_locus_tag=BDI4_560030 NZ_CAJZAS010000212.1 Protein Homology CDS 29929 30837 . - 0 ID=cds-WP_059526093.1;Parent=gene-LDO45_RS23725;Dbxref=GenBank:WP_059526093.1;Name=WP_059526093.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763369.1;locus_tag=LDO45_RS23725;product=RNase adapter RapZ;protein_id=WP_059526093.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 30915 31883 . - . ID=gene-LDO45_RS23730;Name=hprK;gbkey=Gene;gene=hprK;gene_biotype=protein_coding;locus_tag=LDO45_RS23730;old_locus_tag=BDI4_560031 NZ_CAJZAS010000212.1 Protein Homology CDS 30915 31883 . - 0 ID=cds-WP_011353227.1;Parent=gene-LDO45_RS23730;Dbxref=GenBank:WP_011353227.1;Name=WP_011353227.1;Ontology_term=GO:0000160,GO:0006109,GO:0000155,GO:0005524;gbkey=CDS;gene=hprK;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of carbohydrate metabolic process|0006109||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877041.1;locus_tag=LDO45_RS23730;product=HPr(Ser) kinase/phosphatase;protein_id=WP_011353227.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 32003 32542 . - . ID=gene-LDO45_RS23735;Name=LDO45_RS23735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23735;old_locus_tag=BDI4_560032 NZ_CAJZAS010000212.1 Protein Homology CDS 32003 32542 . - 0 ID=cds-WP_059526091.1;Parent=gene-LDO45_RS23735;Dbxref=GenBank:WP_059526091.1;Name=WP_059526091.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353226.1;locus_tag=LDO45_RS23735;product=PTS sugar transporter subunit IIA;protein_id=WP_059526091.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 32712 33071 . - . ID=gene-LDO45_RS23740;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=LDO45_RS23740;old_locus_tag=BDI4_560033 NZ_CAJZAS010000212.1 Protein Homology CDS 32712 33071 . - 0 ID=cds-WP_006477786.1;Parent=gene-LDO45_RS23740;Dbxref=GenBank:WP_006477786.1;Name=WP_006477786.1;Ontology_term=GO:0045182,GO:0005840;gbkey=CDS;gene=hpf;go_component=ribosome|0005840||IEA;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195219.1;locus_tag=LDO45_RS23740;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;protein_id=WP_006477786.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 33231 34736 . - . ID=gene-LDO45_RS23745;Name=LDO45_RS23745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23745;old_locus_tag=BDI4_560034 NZ_CAJZAS010000212.1 Protein Homology CDS 33231 34736 . - 0 ID=cds-WP_223963948.1;Parent=gene-LDO45_RS23745;Dbxref=GenBank:WP_223963948.1;Name=WP_223963948.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195216.1;locus_tag=LDO45_RS23745;product=RNA polymerase factor sigma-54;protein_id=WP_223963948.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 34904 35680 . - . ID=gene-LDO45_RS23750;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=LDO45_RS23750;old_locus_tag=BDI4_560035 NZ_CAJZAS010000212.1 Protein Homology CDS 34904 35680 . - 0 ID=cds-WP_021162599.1;Parent=gene-LDO45_RS23750;Dbxref=GenBank:WP_021162599.1;Name=WP_021162599.1;Ontology_term=GO:0015920,GO:0015221,GO:0042626,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886055.1;locus_tag=LDO45_RS23750;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_021162599.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 35677 36342 . - . ID=gene-LDO45_RS23755;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=LDO45_RS23755;old_locus_tag=BDI4_560036 NZ_CAJZAS010000212.1 Protein Homology CDS 35677 36342 . - 0 ID=cds-WP_059464489.1;Parent=gene-LDO45_RS23755;Dbxref=GenBank:WP_059464489.1;Name=WP_059464489.1;Ontology_term=GO:0015920,GO:0001530,GO:0042597;gbkey=CDS;gene=lptA;go_component=periplasmic space|0042597||IEA;go_function=lipopolysaccharide binding|0001530||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752624.1;locus_tag=LDO45_RS23755;product=lipopolysaccharide transport periplasmic protein LptA;protein_id=WP_059464489.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 36363 36977 . - . ID=gene-LDO45_RS23760;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=LDO45_RS23760;old_locus_tag=BDI4_560037 NZ_CAJZAS010000212.1 Protein Homology CDS 36363 36977 . - 0 ID=cds-WP_059451451.1;Parent=gene-LDO45_RS23760;Dbxref=GenBank:WP_059451451.1;Name=WP_059451451.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptC;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893044.1;locus_tag=LDO45_RS23760;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_059451451.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 36981 37517 . - . ID=gene-LDO45_RS23765;Name=LDO45_RS23765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23765;old_locus_tag=BDI4_560038 NZ_CAJZAS010000212.1 Protein Homology CDS 36981 37517 . - 0 ID=cds-WP_059526086.1;Parent=gene-LDO45_RS23765;Dbxref=GenBank:WP_059526086.1;Name=WP_059526086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010113872.1;locus_tag=LDO45_RS23765;product=HAD family hydrolase;protein_id=WP_059526086.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 37517 38500 . - . ID=gene-LDO45_RS23770;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=LDO45_RS23770;old_locus_tag=BDI4_560039 NZ_CAJZAS010000212.1 Protein Homology CDS 37517 38500 . - 0 ID=cds-WP_059526084.1;Parent=gene-LDO45_RS23770;Dbxref=GenBank:WP_059526084.1;Name=WP_059526084.1;gbkey=CDS;gene=kdsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195206.1;locus_tag=LDO45_RS23770;product=arabinose 5-phosphate isomerase KdsD;protein_id=WP_059526084.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 38626 40632 . + . ID=gene-LDO45_RS23775;Name=LDO45_RS23775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23775;old_locus_tag=BDI4_560040 NZ_CAJZAS010000212.1 Protein Homology CDS 38626 40632 . + 0 ID=cds-WP_059526284.1;Parent=gene-LDO45_RS23775;Dbxref=GenBank:WP_059526284.1;Name=WP_059526284.1;Ontology_term=GO:0006812,GO:0055085,GO:1902600,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195204.1;locus_tag=LDO45_RS23775;product=monovalent cation:proton antiporter family protein;protein_id=WP_059526284.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 40711 41277 . + . ID=gene-LDO45_RS23780;Name=LDO45_RS23780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23780;old_locus_tag=BDI4_560041 NZ_CAJZAS010000212.1 Protein Homology CDS 40711 41277 . + 0 ID=cds-WP_059526281.1;Parent=gene-LDO45_RS23780;Dbxref=GenBank:WP_059526281.1;Name=WP_059526281.1;Ontology_term=GO:0006168,GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA,nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212706.1;locus_tag=LDO45_RS23780;product=adenine phosphoribosyltransferase;protein_id=WP_059526281.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 41312 41926 . + . ID=gene-LDO45_RS23785;Name=LDO45_RS23785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23785;old_locus_tag=BDI4_560042 NZ_CAJZAS010000212.1 Protein Homology CDS 41312 41926 . + 0 ID=cds-WP_059526081.1;Parent=gene-LDO45_RS23785;Dbxref=GenBank:WP_059526081.1;Name=WP_059526081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896023.1;locus_tag=LDO45_RS23785;product=LysE family translocator;protein_id=WP_059526081.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 41931 42788 . + . ID=gene-LDO45_RS23790;Name=LDO45_RS23790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23790;old_locus_tag=BDI4_560043 NZ_CAJZAS010000212.1 Protein Homology CDS 41931 42788 . + 0 ID=cds-WP_059691463.1;Parent=gene-LDO45_RS23790;Dbxref=GenBank:WP_059691463.1;Name=WP_059691463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759036.1;locus_tag=LDO45_RS23790;product=DUF4743 domain-containing protein;protein_id=WP_059691463.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 42876 43760 . + . ID=gene-LDO45_RS23795;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=LDO45_RS23795;old_locus_tag=BDI4_560044 NZ_CAJZAS010000212.1 Protein Homology CDS 42876 43760 . + 0 ID=cds-WP_223963956.1;Parent=gene-LDO45_RS23795;Dbxref=GenBank:WP_223963956.1;Name=WP_223963956.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522850.1;locus_tag=LDO45_RS23795;product=formyltetrahydrofolate deformylase;protein_id=WP_223963956.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 43883 44965 . - . ID=gene-LDO45_RS23800;Name=LDO45_RS23800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23800;old_locus_tag=BDI4_560045 NZ_CAJZAS010000212.1 Protein Homology CDS 43883 44965 . - 0 ID=cds-WP_059526075.1;Parent=gene-LDO45_RS23800;Dbxref=GenBank:WP_059526075.1;Name=WP_059526075.1;Ontology_term=GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917426.1;locus_tag=LDO45_RS23800;product=AI-2E family transporter;protein_id=WP_059526075.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 45221 48106 . - . ID=gene-LDO45_RS23805;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=LDO45_RS23805;old_locus_tag=BDI4_560047 NZ_CAJZAS010000212.1 Protein Homology CDS 45221 48106 . - 0 ID=cds-WP_059526073.1;Parent=gene-LDO45_RS23805;Dbxref=GenBank:WP_059526073.1;Name=WP_059526073.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090680.1;locus_tag=LDO45_RS23805;product=excinuclease ABC subunit UvrA;protein_id=WP_059526073.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 48382 49569 . + . ID=gene-LDO45_RS23810;Name=LDO45_RS23810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23810;old_locus_tag=BDI4_560049 NZ_CAJZAS010000212.1 Protein Homology CDS 48382 49569 . + 0 ID=cds-WP_059451442.1;Parent=gene-LDO45_RS23810;Dbxref=GenBank:WP_059451442.1;Name=WP_059451442.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886043.1;locus_tag=LDO45_RS23810;product=MFS transporter;protein_id=WP_059451442.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 49673 50227 . + . ID=gene-LDO45_RS23815;Name=LDO45_RS23815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23815;old_locus_tag=BDI4_560050 NZ_CAJZAS010000212.1 Protein Homology CDS 49673 50227 . + 0 ID=cds-WP_059691466.1;Parent=gene-LDO45_RS23815;Dbxref=GenBank:WP_059691466.1;Name=WP_059691466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353211.1;locus_tag=LDO45_RS23815;product=single-stranded DNA-binding protein;protein_id=WP_059691466.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 50578 51342 . + . ID=gene-LDO45_RS23820;Name=LDO45_RS23820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23820;old_locus_tag=BDI4_560051 NZ_CAJZAS010000212.1 Protein Homology CDS 50578 51342 . + 0 ID=cds-WP_059526069.1;Parent=gene-LDO45_RS23820;Dbxref=GenBank:WP_059526069.1;Name=WP_059526069.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334232.1;locus_tag=LDO45_RS23820;product=ParA family protein;protein_id=WP_059526069.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 51807 52388 . + . ID=gene-LDO45_RS23825;Name=phaP;gbkey=Gene;gene=phaP;gene_biotype=protein_coding;locus_tag=LDO45_RS23825;old_locus_tag=BDI4_560053 NZ_CAJZAS010000212.1 Protein Homology CDS 51807 52388 . + 0 ID=cds-WP_059526067.1;Parent=gene-LDO45_RS23825;Dbxref=GenBank:WP_059526067.1;Name=WP_059526067.1;Note=Members of this family are phasins (small proteins associated with inclusions such as PHA granules). Note that several different families of phasins have been named PhaP despite very little sequence similarity to each other.;gbkey=CDS;gene=phaP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694404.1;locus_tag=LDO45_RS23825;product=TIGR01841 family phasin;protein_id=WP_059526067.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 52644 53825 . + . ID=gene-LDO45_RS23830;Name=LDO45_RS23830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23830;old_locus_tag=BDI4_560054 NZ_CAJZAS010000212.1 Protein Homology CDS 52644 53825 . + 0 ID=cds-WP_223963958.1;Parent=gene-LDO45_RS23830;Dbxref=GenBank:WP_223963958.1;Name=WP_223963958.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485256.1;locus_tag=LDO45_RS23830;product=acetyl-CoA C-acetyltransferase;protein_id=WP_223963958.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 53946 54686 . + . ID=gene-LDO45_RS23835;Name=LDO45_RS23835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23835;old_locus_tag=BDI4_560055 NZ_CAJZAS010000212.1 Protein Homology CDS 53946 54686 . + 0 ID=cds-WP_059537451.1;Parent=gene-LDO45_RS23835;Dbxref=GenBank:WP_059537451.1;Name=WP_059537451.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007586437.1;locus_tag=LDO45_RS23835;product=3-ketoacyl-ACP reductase;protein_id=WP_059537451.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 54805 55371 . + . ID=gene-LDO45_RS23840;Name=phaR;gbkey=Gene;gene=phaR;gene_biotype=protein_coding;locus_tag=LDO45_RS23840;old_locus_tag=BDI4_560056 NZ_CAJZAS010000212.1 Protein Homology CDS 54805 55371 . + 0 ID=cds-WP_011549704.1;Parent=gene-LDO45_RS23840;Dbxref=GenBank:WP_011549704.1;Name=WP_011549704.1;Ontology_term=GO:0006355;gbkey=CDS;gene=phaR;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192676.1;locus_tag=LDO45_RS23840;product=polyhydroxyalkanoate synthesis repressor PhaR;protein_id=WP_011549704.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 55734 55988 . - . ID=gene-LDO45_RS23845;Name=LDO45_RS23845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23845;old_locus_tag=BDI4_560057 NZ_CAJZAS010000212.1 Protein Homology CDS 55734 55988 . - 0 ID=cds-WP_059537455.1;Parent=gene-LDO45_RS23845;Dbxref=GenBank:WP_059537455.1;Name=WP_059537455.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363977.1;locus_tag=LDO45_RS23845;product=hypothetical protein;protein_id=WP_059537455.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 56072 56218 . + . ID=gene-LDO45_RS23850;Name=LDO45_RS23850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23850 NZ_CAJZAS010000212.1 GeneMarkS-2+ CDS 56072 56218 . + 0 ID=cds-WP_223963960.1;Parent=gene-LDO45_RS23850;Dbxref=GenBank:WP_223963960.1;Name=WP_223963960.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS23850;product=hypothetical protein;protein_id=WP_223963960.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 56260 57621 . + . ID=gene-LDO45_RS23855;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=LDO45_RS23855;old_locus_tag=BDI4_560059 NZ_CAJZAS010000212.1 Protein Homology CDS 56260 57621 . + 0 ID=cds-WP_174913031.1;Parent=gene-LDO45_RS23855;Dbxref=GenBank:WP_174913031.1;Name=WP_174913031.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896933.1;locus_tag=LDO45_RS23855;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_174913031.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 57625 58551 . + . ID=gene-LDO45_RS23860;Name=LDO45_RS23860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23860;old_locus_tag=BDI4_560060 NZ_CAJZAS010000212.1 Protein Homology CDS 57625 58551 . + 0 ID=cds-WP_059524207.1;Parent=gene-LDO45_RS23860;Dbxref=GenBank:WP_059524207.1;Name=WP_059524207.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485268.1;locus_tag=LDO45_RS23860;product=sugar kinase;protein_id=WP_059524207.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 58773 59315 . + . ID=gene-LDO45_RS23865;Name=LDO45_RS23865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23865;old_locus_tag=BDI4_560061 NZ_CAJZAS010000212.1 Protein Homology CDS 58773 59315 . + 0 ID=cds-WP_223963961.1;Parent=gene-LDO45_RS23865;Dbxref=GenBank:WP_223963961.1;Name=WP_223963961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754355.1;locus_tag=LDO45_RS23865;product=hypothetical protein;protein_id=WP_223963961.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 59429 60613 . + . ID=gene-LDO45_RS23870;Name=LDO45_RS23870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23870;old_locus_tag=BDI4_560062 NZ_CAJZAS010000212.1 Protein Homology CDS 59429 60613 . + 0 ID=cds-WP_223963963.1;Parent=gene-LDO45_RS23870;Dbxref=GenBank:WP_223963963.1;Name=WP_223963963.1;Ontology_term=GO:0019346,GO:0047804;gbkey=CDS;go_function=cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656999.1;locus_tag=LDO45_RS23870;product=cystathionine beta-lyase;protein_id=WP_223963963.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 60694 61539 . - . ID=gene-LDO45_RS23875;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=LDO45_RS23875;old_locus_tag=BDI4_560063 NZ_CAJZAS010000212.1 Protein Homology CDS 60694 61539 . - 0 ID=cds-WP_059524213.1;Parent=gene-LDO45_RS23875;Dbxref=GenBank:WP_059524213.1;Name=WP_059524213.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006475922.1;locus_tag=LDO45_RS23875;product=phosphoserine phosphatase SerB;protein_id=WP_059524213.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 61729 62670 . - . ID=gene-LDO45_RS23880;Name=LDO45_RS23880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23880;old_locus_tag=BDI4_560064 NZ_CAJZAS010000212.1 Protein Homology CDS 61729 62670 . - 0 ID=cds-WP_223963965.1;Parent=gene-LDO45_RS23880;Dbxref=GenBank:WP_223963965.1;Name=WP_223963965.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754358.1;locus_tag=LDO45_RS23880;product=LysR family transcriptional regulator;protein_id=WP_223963965.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 62794 63810 . + . ID=gene-LDO45_RS23885;Name=LDO45_RS23885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23885;old_locus_tag=BDI4_560065 NZ_CAJZAS010000212.1 Protein Homology CDS 62794 63810 . + 0 ID=cds-WP_223963967.1;Parent=gene-LDO45_RS23885;Dbxref=GenBank:WP_223963967.1;Name=WP_223963967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497183.1;locus_tag=LDO45_RS23885;product=zinc-binding alcohol dehydrogenase family protein;protein_id=WP_223963967.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 64020 64571 . + . ID=gene-LDO45_RS23890;Name=LDO45_RS23890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23890;old_locus_tag=BDI4_560066 NZ_CAJZAS010000212.1 Protein Homology CDS 64020 64571 . + 0 ID=cds-WP_223963969.1;Parent=gene-LDO45_RS23890;Dbxref=GenBank:WP_223963969.1;Name=WP_223963969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213276.1;locus_tag=LDO45_RS23890;product=DUF6013 family protein;protein_id=WP_223963969.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 64824 65297 . + . ID=gene-LDO45_RS23895;Name=LDO45_RS23895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23895;old_locus_tag=BDI4_560067 NZ_CAJZAS010000212.1 Protein Homology CDS 64824 65297 . + 0 ID=cds-WP_059691653.1;Parent=gene-LDO45_RS23895;Dbxref=GenBank:WP_059691653.1;Name=WP_059691653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896941.1;locus_tag=LDO45_RS23895;product=PliI family lysozyme inhibitor of I-type lysozyme;protein_id=WP_059691653.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 65340 66143 . - . ID=gene-LDO45_RS23900;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=LDO45_RS23900;old_locus_tag=BDI4_560068 NZ_CAJZAS010000212.1 Protein Homology CDS 65340 66143 . - 0 ID=cds-WP_223963971.1;Parent=gene-LDO45_RS23900;Dbxref=GenBank:WP_223963971.1;Name=WP_223963971.1;gbkey=CDS;gene=fetB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485250.1;locus_tag=LDO45_RS23900;product=iron export ABC transporter permease subunit FetB;protein_id=WP_223963971.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 66140 66841 . - . ID=gene-LDO45_RS23905;Name=LDO45_RS23905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23905;old_locus_tag=BDI4_560069 NZ_CAJZAS010000212.1 Protein Homology CDS 66140 66841 . - 0 ID=cds-WP_223963973.1;Parent=gene-LDO45_RS23905;Dbxref=GenBank:WP_223963973.1;Name=WP_223963973.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197457.1;locus_tag=LDO45_RS23905;product=ATP-binding cassette domain-containing protein;protein_id=WP_223963973.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 66994 69300 . + . ID=gene-LDO45_RS23910;Name=LDO45_RS23910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23910;old_locus_tag=BDI4_560070 NZ_CAJZAS010000212.1 Protein Homology CDS 66994 69300 . + 0 ID=cds-WP_223963975.1;Parent=gene-LDO45_RS23910;Dbxref=GenBank:WP_223963975.1;Name=WP_223963975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656991.1;locus_tag=LDO45_RS23910;product=AsmA family protein;protein_id=WP_223963975.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 69433 71025 . + . ID=gene-LDO45_RS23915;Name=LDO45_RS23915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23915;old_locus_tag=BDI4_560072 NZ_CAJZAS010000212.1 Protein Homology CDS 69433 71025 . + 0 ID=cds-WP_059524228.1;Parent=gene-LDO45_RS23915;Dbxref=GenBank:WP_059524228.1;Name=WP_059524228.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485248.1;locus_tag=LDO45_RS23915;product=ABC-F family ATPase;protein_id=WP_059524228.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 71253 71618 . - . ID=gene-LDO45_RS23920;Name=LDO45_RS23920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23920;old_locus_tag=BDI4_560073 NZ_CAJZAS010000212.1 Protein Homology CDS 71253 71618 . - 0 ID=cds-WP_059467440.1;Parent=gene-LDO45_RS23920;Dbxref=GenBank:WP_059467440.1;Name=WP_059467440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399981.1;locus_tag=LDO45_RS23920;product=hypothetical protein;protein_id=WP_059467440.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 71887 73323 . + . ID=gene-LDO45_RS23925;Name=LDO45_RS23925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23925;old_locus_tag=BDI4_560074 NZ_CAJZAS010000212.1 Protein Homology CDS 71887 73323 . + 0 ID=cds-WP_223963977.1;Parent=gene-LDO45_RS23925;Dbxref=GenBank:WP_223963977.1;Name=WP_223963977.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760071.1;locus_tag=LDO45_RS23925;product=aldehyde dehydrogenase family protein;protein_id=WP_223963977.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 73453 74643 . + . ID=gene-LDO45_RS23930;Name=LDO45_RS23930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23930;old_locus_tag=BDI4_560075 NZ_CAJZAS010000212.1 Protein Homology CDS 73453 74643 . + 0 ID=cds-WP_223963979.1;Parent=gene-LDO45_RS23930;Dbxref=GenBank:WP_223963979.1;Name=WP_223963979.1;Ontology_term=GO:0004497;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328583.1;locus_tag=LDO45_RS23930;product=nitronate monooxygenase family protein;protein_id=WP_223963979.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 74710 75351 . + . ID=gene-LDO45_RS23935;Name=LDO45_RS23935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23935;old_locus_tag=BDI4_560076 NZ_CAJZAS010000212.1 Protein Homology CDS 74710 75351 . + 0 ID=cds-WP_059524231.1;Parent=gene-LDO45_RS23935;Dbxref=GenBank:WP_059524231.1;Name=WP_059524231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328582.1;locus_tag=LDO45_RS23935;product=OmpW family protein;protein_id=WP_059524231.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 75427 75630 . - . ID=gene-LDO45_RS23940;Name=LDO45_RS23940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23940;old_locus_tag=BDI4_560077 NZ_CAJZAS010000212.1 Protein Homology CDS 75427 75630 . - 0 ID=cds-WP_027784516.1;Parent=gene-LDO45_RS23940;Dbxref=GenBank:WP_027784516.1;Name=WP_027784516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760068.1;locus_tag=LDO45_RS23940;product=DUF1289 domain-containing protein;protein_id=WP_027784516.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 75990 77084 . + . ID=gene-LDO45_RS23945;Name=LDO45_RS23945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23945;old_locus_tag=BDI4_560078 NZ_CAJZAS010000212.1 Protein Homology CDS 75990 77084 . + 0 ID=cds-WP_059524232.1;Parent=gene-LDO45_RS23945;Dbxref=GenBank:WP_059524232.1;Name=WP_059524232.1;Ontology_term=GO:0015846,GO:0019808,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004266745.1;locus_tag=LDO45_RS23945;product=polyamine ABC transporter substrate-binding protein;protein_id=WP_059524232.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 77171 78331 . + . ID=gene-LDO45_RS23950;Name=LDO45_RS23950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23950;old_locus_tag=BDI4_560079 NZ_CAJZAS010000212.1 Protein Homology CDS 77171 78331 . + 0 ID=cds-WP_223963981.1;Parent=gene-LDO45_RS23950;Dbxref=GenBank:WP_223963981.1;Name=WP_223963981.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115150.1;locus_tag=LDO45_RS23950;product=ABC transporter ATP-binding protein;protein_id=WP_223963981.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 78328 79257 . + . ID=gene-LDO45_RS23955;Name=LDO45_RS23955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23955;old_locus_tag=BDI4_560080 NZ_CAJZAS010000212.1 Protein Homology CDS 78328 79257 . + 0 ID=cds-WP_223963983.1;Parent=gene-LDO45_RS23955;Dbxref=GenBank:WP_223963983.1;Name=WP_223963983.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884922.1;locus_tag=LDO45_RS23955;product=ABC transporter permease subunit;protein_id=WP_223963983.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 79254 80075 . + . ID=gene-LDO45_RS23960;Name=LDO45_RS23960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23960;old_locus_tag=BDI4_560081 NZ_CAJZAS010000212.1 Protein Homology CDS 79254 80075 . + 0 ID=cds-WP_059524235.1;Parent=gene-LDO45_RS23960;Dbxref=GenBank:WP_059524235.1;Name=WP_059524235.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352198.1;locus_tag=LDO45_RS23960;product=ABC transporter permease subunit;protein_id=WP_059524235.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 80162 81772 . - . ID=gene-LDO45_RS23965;Name=LDO45_RS23965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23965;old_locus_tag=BDI4_560082 NZ_CAJZAS010000212.1 Protein Homology CDS 80162 81772 . - 0 ID=cds-WP_223963985.1;Parent=gene-LDO45_RS23965;Dbxref=GenBank:WP_223963985.1;Name=WP_223963985.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023384.5;locus_tag=LDO45_RS23965;product=ricin-type beta-trefoil lectin domain protein;protein_id=WP_223963985.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 81911 82717 . - . ID=gene-LDO45_RS23970;Name=LDO45_RS23970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23970;old_locus_tag=BDI4_560083 NZ_CAJZAS010000212.1 Protein Homology CDS 81911 82717 . - 0 ID=cds-WP_059701118.1;Parent=gene-LDO45_RS23970;Dbxref=GenBank:WP_059701118.1;Name=WP_059701118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006475949.1;locus_tag=LDO45_RS23970;product=sulfite exporter TauE/SafE family protein;protein_id=WP_059701118.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 82736 84427 . - . ID=gene-LDO45_RS23975;Name=LDO45_RS23975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23975;old_locus_tag=BDI4_560084 NZ_CAJZAS010000212.1 Protein Homology CDS 82736 84427 . - 0 ID=cds-WP_223963987.1;Parent=gene-LDO45_RS23975;Dbxref=GenBank:WP_223963987.1;Name=WP_223963987.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399997.1;locus_tag=LDO45_RS23975;product=bifunctional protein tyrosine phosphatase family protein/NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_223963987.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 84457 85326 . - . ID=gene-LDO45_RS23980;Name=LDO45_RS23980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23980;old_locus_tag=BDI4_560085 NZ_CAJZAS010000212.1 Protein Homology CDS 84457 85326 . - 0 ID=cds-WP_373557182.1;Parent=gene-LDO45_RS23980;Dbxref=GenBank:WP_373557182.1;Name=WP_373557182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363953.1;locus_tag=LDO45_RS23980;product=MBL fold metallo-hydrolase;protein_id=WP_373557182.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 85591 86988 . + . ID=gene-LDO45_RS23985;Name=LDO45_RS23985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23985;old_locus_tag=BDI4_560086 NZ_CAJZAS010000212.1 Protein Homology CDS 85591 86988 . + 0 ID=cds-WP_223963989.1;Parent=gene-LDO45_RS23985;Dbxref=GenBank:WP_223963989.1;Name=WP_223963989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488122.1;locus_tag=LDO45_RS23985;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_223963989.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 87057 88085 . - . ID=gene-LDO45_RS23990;Name=LDO45_RS23990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23990;old_locus_tag=BDI4_560087 NZ_CAJZAS010000212.1 Protein Homology CDS 87057 88085 . - 0 ID=cds-WP_059701121.1;Parent=gene-LDO45_RS23990;Dbxref=GenBank:WP_059701121.1;Name=WP_059701121.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497208.1;locus_tag=LDO45_RS23990;product=MerR family transcriptional regulator;protein_id=WP_059701121.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 88210 89799 . - . ID=gene-LDO45_RS23995;Name=LDO45_RS23995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS23995;old_locus_tag=BDI4_560088 NZ_CAJZAS010000212.1 Protein Homology CDS 88210 89799 . - 0 ID=cds-WP_223963991.1;Parent=gene-LDO45_RS23995;Dbxref=GenBank:WP_223963991.1;Name=WP_223963991.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896965.1;locus_tag=LDO45_RS23995;product=efflux transporter outer membrane subunit;protein_id=WP_223963991.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 89802 92948 . - . ID=gene-LDO45_RS24000;Name=LDO45_RS24000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24000;old_locus_tag=BDI4_560089 NZ_CAJZAS010000212.1 Protein Homology CDS 89802 92948 . - 0 ID=cds-WP_223963993.1;Parent=gene-LDO45_RS24000;Dbxref=GenBank:WP_223963993.1;Name=WP_223963993.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352187.1;locus_tag=LDO45_RS24000;product=efflux RND transporter permease subunit;protein_id=WP_223963993.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 92945 94054 . - . ID=gene-LDO45_RS24005;Name=LDO45_RS24005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24005;old_locus_tag=BDI4_560090 NZ_CAJZAS010000212.1 Protein Homology CDS 92945 94054 . - 0 ID=cds-WP_223963995.1;Parent=gene-LDO45_RS24005;Dbxref=GenBank:WP_223963995.1;Name=WP_223963995.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538244.1;locus_tag=LDO45_RS24005;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_223963995.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 94246 94866 . + . ID=gene-LDO45_RS24010;Name=LDO45_RS24010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24010;old_locus_tag=BDI4_560092 NZ_CAJZAS010000212.1 Protein Homology CDS 94246 94866 . + 0 ID=cds-WP_059524255.1;Parent=gene-LDO45_RS24010;Dbxref=GenBank:WP_059524255.1;Name=WP_059524255.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491184.1;locus_tag=LDO45_RS24010;product=TetR/AcrR family transcriptional regulator;protein_id=WP_059524255.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 94883 96616 . - . ID=gene-LDO45_RS24015;Name=LDO45_RS24015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24015;old_locus_tag=BDI4_560093 NZ_CAJZAS010000212.1 Protein Homology CDS 94883 96616 . - 0 ID=cds-WP_218921275.1;Parent=gene-LDO45_RS24015;Dbxref=GenBank:WP_218921275.1;Name=WP_218921275.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467624.1;locus_tag=LDO45_RS24015;product=ClcB-like voltage-gated chloride channel protein;protein_id=WP_218921275.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 96731 97807 . - . ID=gene-LDO45_RS24020;Name=LDO45_RS24020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24020;old_locus_tag=BDI4_560094 NZ_CAJZAS010000212.1 Protein Homology CDS 96731 97807 . - 0 ID=cds-WP_223963997.1;Parent=gene-LDO45_RS24020;Dbxref=GenBank:WP_223963997.1;Name=WP_223963997.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213301.1;locus_tag=LDO45_RS24020;product=YeiH family protein;protein_id=WP_223963997.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 97919 98812 . + . ID=gene-LDO45_RS24025;Name=LDO45_RS24025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24025;old_locus_tag=BDI4_560095 NZ_CAJZAS010000212.1 Protein Homology CDS 97919 98812 . + 0 ID=cds-WP_223963999.1;Parent=gene-LDO45_RS24025;Dbxref=GenBank:WP_223963999.1;Name=WP_223963999.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328565.1;locus_tag=LDO45_RS24025;product=LysR family transcriptional regulator;protein_id=WP_223963999.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 98966 99730 . + . ID=gene-LDO45_RS24030;Name=LDO45_RS24030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24030;old_locus_tag=BDI4_560096 NZ_CAJZAS010000212.1 Protein Homology CDS 98966 99730 . + 0 ID=cds-WP_223964001.1;Parent=gene-LDO45_RS24030;Dbxref=GenBank:WP_223964001.1;Name=WP_223964001.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754793.1;locus_tag=LDO45_RS24030;product=sugar phosphate isomerase/epimerase;protein_id=WP_223964001.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 99759 100751 . + . ID=gene-LDO45_RS24035;Name=LDO45_RS24035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24035;old_locus_tag=BDI4_560097 NZ_CAJZAS010000212.1 Protein Homology CDS 99759 100751 . + 0 ID=cds-WP_059524266.1;Parent=gene-LDO45_RS24035;Dbxref=GenBank:WP_059524266.1;Name=WP_059524266.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764274.1;locus_tag=LDO45_RS24035;product=sugar kinase;protein_id=WP_059524266.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 100915 102195 . + . ID=gene-LDO45_RS24040;Name=LDO45_RS24040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24040;old_locus_tag=BDI4_560098 NZ_CAJZAS010000212.1 Protein Homology CDS 100915 102195 . + 0 ID=cds-WP_059524268.1;Parent=gene-LDO45_RS24040;Dbxref=GenBank:WP_059524268.1;Name=WP_059524268.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890952.1;locus_tag=LDO45_RS24040;product=MFS transporter;protein_id=WP_059524268.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 102201 103166 . + . ID=gene-LDO45_RS24045;Name=LDO45_RS24045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24045;old_locus_tag=BDI4_560099 NZ_CAJZAS010000212.1 Protein Homology CDS 102201 103166 . + 0 ID=cds-WP_223964003.1;Parent=gene-LDO45_RS24045;Dbxref=GenBank:WP_223964003.1;Name=WP_223964003.1;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352178.1;locus_tag=LDO45_RS24045;product=NAD(P)-dependent oxidoreductase;protein_id=WP_223964003.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 103489 104532 . + . ID=gene-LDO45_RS24050;Name=LDO45_RS24050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24050;old_locus_tag=BDI4_560101 NZ_CAJZAS010000212.1 Protein Homology CDS 103489 104532 . + 0 ID=cds-WP_223964006.1;Parent=gene-LDO45_RS24050;Dbxref=GenBank:WP_223964006.1;Name=WP_223964006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332130.1;locus_tag=LDO45_RS24050;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_223964006.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 104587 105375 . + . ID=gene-LDO45_RS24055;Name=LDO45_RS24055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24055;old_locus_tag=BDI4_560102 NZ_CAJZAS010000212.1 Protein Homology CDS 104587 105375 . + 0 ID=cds-WP_223964013.1;Parent=gene-LDO45_RS24055;Dbxref=GenBank:WP_223964013.1;Name=WP_223964013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491183.1;locus_tag=LDO45_RS24055;product=YhfC family intramembrane metalloprotease;protein_id=WP_223964013.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 105389 105751 . + . ID=gene-LDO45_RS24060;Name=LDO45_RS24060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24060;old_locus_tag=BDI4_560103 NZ_CAJZAS010000212.1 Protein Homology CDS 105389 105751 . + 0 ID=cds-WP_059691676.1;Parent=gene-LDO45_RS24060;Dbxref=GenBank:WP_059691676.1;Name=WP_059691676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884902.1;locus_tag=LDO45_RS24060;product=DUF3022 domain-containing protein;protein_id=WP_059691676.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 105786 106217 . - . ID=gene-LDO45_RS24065;Name=LDO45_RS24065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24065;old_locus_tag=BDI4_560104 NZ_CAJZAS010000212.1 Protein Homology CDS 105786 106217 . - 0 ID=cds-WP_059524276.1;Parent=gene-LDO45_RS24065;Dbxref=GenBank:WP_059524276.1;Name=WP_059524276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896979.1;locus_tag=LDO45_RS24065;product=PGDYG domain-containing protein;protein_id=WP_059524276.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 106347 106892 . - . ID=gene-LDO45_RS24070;Name=LDO45_RS24070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24070;old_locus_tag=BDI4_560105 NZ_CAJZAS010000212.1 Protein Homology CDS 106347 106892 . - 0 ID=cds-WP_223964015.1;Parent=gene-LDO45_RS24070;Dbxref=GenBank:WP_223964015.1;Name=WP_223964015.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493179.1;locus_tag=LDO45_RS24070;product=Spy/CpxP family protein refolding chaperone;protein_id=WP_223964015.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 107228 107692 . + . ID=gene-LDO45_RS24075;Name=LDO45_RS24075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24075;old_locus_tag=BDI4_560106 NZ_CAJZAS010000212.1 Protein Homology CDS 107228 107692 . + 0 ID=cds-WP_006481526.1;Parent=gene-LDO45_RS24075;Dbxref=GenBank:WP_006481526.1;Name=WP_006481526.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656928.1;locus_tag=LDO45_RS24075;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_006481526.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 108064 109164 . + . ID=gene-LDO45_RS24080;Name=LDO45_RS24080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24080;old_locus_tag=BDI4_560107 NZ_CAJZAS010000212.1 Protein Homology CDS 108064 109164 . + 0 ID=cds-WP_040144221.1;Parent=gene-LDO45_RS24080;Dbxref=GenBank:WP_040144221.1;Name=WP_040144221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192972.1;locus_tag=LDO45_RS24080;product=saccharopine dehydrogenase family protein;protein_id=WP_040144221.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 109273 109890 . - . ID=gene-LDO45_RS24085;Name=LDO45_RS24085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24085;old_locus_tag=BDI4_560108 NZ_CAJZAS010000212.1 Protein Homology CDS 109273 109890 . - 0 ID=cds-WP_059524280.1;Parent=gene-LDO45_RS24085;Dbxref=GenBank:WP_059524280.1;Name=WP_059524280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004266847.1;locus_tag=LDO45_RS24085;product=ATP-binding protein;protein_id=WP_059524280.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 109887 110033 . - . ID=gene-LDO45_RS24090;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;locus_tag=LDO45_RS24090;old_locus_tag=BDI4_560109 NZ_CAJZAS010000212.1 Protein Homology CDS 109887 110033 . - 0 ID=cds-WP_063888607.1;Parent=gene-LDO45_RS24090;Dbxref=GenBank:WP_063888607.1;Name=WP_063888607.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554335.1;locus_tag=LDO45_RS24090;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_063888607.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 110213 111190 . + . ID=gene-LDO45_RS24095;Name=corA;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=LDO45_RS24095;old_locus_tag=BDI4_560110 NZ_CAJZAS010000212.1 Protein Homology CDS 110213 111190 . + 0 ID=cds-WP_059524542.1;Parent=gene-LDO45_RS24095;Dbxref=GenBank:WP_059524542.1;Name=WP_059524542.1;Ontology_term=GO:0006824,GO:0015693,GO:0015087,GO:0015095,GO:0016020;gbkey=CDS;gene=corA;go_component=membrane|0016020||IEA;go_function=cobalt ion transmembrane transporter activity|0015087||IEA,magnesium ion transmembrane transporter activity|0015095||IEA;go_process=cobalt ion transport|0006824||IEA,magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009909327.1;locus_tag=LDO45_RS24095;product=magnesium/cobalt transporter CorA;protein_id=WP_059524542.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 111203 111490 . - . ID=gene-LDO45_RS24100;Name=LDO45_RS24100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24100;old_locus_tag=BDI4_560111 NZ_CAJZAS010000212.1 Protein Homology CDS 111203 111490 . - 0 ID=cds-WP_059451388.1;Parent=gene-LDO45_RS24100;Dbxref=GenBank:WP_059451388.1;Name=WP_059451388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764286.1;locus_tag=LDO45_RS24100;product=YciI-like protein;protein_id=WP_059451388.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 111944 112432 . + . ID=gene-LDO45_RS24105;Name=LDO45_RS24105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24105;old_locus_tag=BDI4_560112 NZ_CAJZAS010000212.1 Protein Homology CDS 111944 112432 . + 0 ID=cds-WP_044848239.1;Parent=gene-LDO45_RS24105;Dbxref=GenBank:WP_044848239.1;Name=WP_044848239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764287.1;locus_tag=LDO45_RS24105;product=aminoacyl-tRNA deacylase;protein_id=WP_044848239.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 112765 113427 . - . ID=gene-LDO45_RS24110;Name=LDO45_RS24110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24110;old_locus_tag=BDI4_560113 NZ_CAJZAS010000212.1 Protein Homology CDS 112765 113427 . - 0 ID=cds-WP_223964017.1;Parent=gene-LDO45_RS24110;Dbxref=GenBank:WP_223964017.1;Name=WP_223964017.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF025030.5;locus_tag=LDO45_RS24110;product=HEAT repeat domain-containing protein;protein_id=WP_223964017.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 114201 114914 . + . ID=gene-LDO45_RS24115;Name=LDO45_RS24115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24115;old_locus_tag=BDI4_560115 NZ_CAJZAS010000212.1 Protein Homology CDS 114201 114914 . + 0 ID=cds-WP_223964019.1;Parent=gene-LDO45_RS24115;Dbxref=GenBank:WP_223964019.1;Name=WP_223964019.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896990.1;locus_tag=LDO45_RS24115;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_223964019.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 115026 115958 . - . ID=gene-LDO45_RS24120;Name=LDO45_RS24120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24120;old_locus_tag=BDI4_560116 NZ_CAJZAS010000212.1 Protein Homology CDS 115026 115958 . - 0 ID=cds-WP_059691683.1;Parent=gene-LDO45_RS24120;Dbxref=GenBank:WP_059691683.1;Name=WP_059691683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757933.1;locus_tag=LDO45_RS24120;product=LysR family transcriptional regulator;protein_id=WP_059691683.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 116322 116786 . + . ID=gene-LDO45_RS24125;Name=LDO45_RS24125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24125;old_locus_tag=BDI4_560117 NZ_CAJZAS010000212.1 Protein Homology CDS 116322 116786 . + 0 ID=cds-WP_059691684.1;Parent=gene-LDO45_RS24125;Dbxref=GenBank:WP_059691684.1;Name=WP_059691684.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757932.1;locus_tag=LDO45_RS24125;product=RidA family protein;protein_id=WP_059691684.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 117063 117482 . + . ID=gene-LDO45_RS24130;Name=LDO45_RS24130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24130;old_locus_tag=BDI4_560118 NZ_CAJZAS010000212.1 Protein Homology CDS 117063 117482 . + 0 ID=cds-WP_059451383.1;Parent=gene-LDO45_RS24130;Dbxref=GenBank:WP_059451383.1;Name=WP_059451383.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896993.1;locus_tag=LDO45_RS24130;product=organic hydroperoxide resistance protein;protein_id=WP_059451383.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 117549 117875 . + . ID=gene-LDO45_RS24135;Name=LDO45_RS24135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24135;old_locus_tag=BDI4_560119 NZ_CAJZAS010000212.1 Protein Homology CDS 117549 117875 . + 0 ID=cds-WP_223964021.1;Parent=gene-LDO45_RS24135;Dbxref=GenBank:WP_223964021.1;Name=WP_223964021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363927.1;locus_tag=LDO45_RS24135;product=DUF4148 domain-containing protein;protein_id=WP_223964021.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 117948 118277 . + . ID=gene-LDO45_RS24140;Name=LDO45_RS24140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24140;old_locus_tag=BDI4_560120 NZ_CAJZAS010000212.1 Protein Homology CDS 117948 118277 . + 0 ID=cds-WP_223964023.1;Parent=gene-LDO45_RS24140;Dbxref=GenBank:WP_223964023.1;Name=WP_223964023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400038.1;locus_tag=LDO45_RS24140;product=DUF4148 domain-containing protein;protein_id=WP_223964023.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 118419 119162 . + . ID=gene-LDO45_RS24145;Name=LDO45_RS24145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24145;old_locus_tag=BDI4_560121 NZ_CAJZAS010000212.1 Protein Homology CDS 118419 119162 . + 0 ID=cds-WP_223964025.1;Parent=gene-LDO45_RS24145;Dbxref=GenBank:WP_223964025.1;Name=WP_223964025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896997.1;locus_tag=LDO45_RS24145;product=GNAT family N-acetyltransferase;protein_id=WP_223964025.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 119221 119676 . - . ID=gene-LDO45_RS24150;Name=LDO45_RS24150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24150;old_locus_tag=BDI4_560122 NZ_CAJZAS010000212.1 Protein Homology CDS 119221 119676 . - 0 ID=cds-WP_059818265.1;Parent=gene-LDO45_RS24150;Dbxref=GenBank:WP_059818265.1;Name=WP_059818265.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754188.1;locus_tag=LDO45_RS24150;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_059818265.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 119803 119946 . - . ID=gene-LDO45_RS24155;Name=LDO45_RS24155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24155;old_locus_tag=BDI4_560124 NZ_CAJZAS010000212.1 Protein Homology CDS 119803 119946 . - 0 ID=cds-WP_223964027.1;Parent=gene-LDO45_RS24155;Dbxref=GenBank:WP_223964027.1;Name=WP_223964027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896999.1;locus_tag=LDO45_RS24155;product=hypothetical protein;protein_id=WP_223964027.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 119943 120314 . - . ID=gene-LDO45_RS24160;Name=LDO45_RS24160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24160;old_locus_tag=BDI4_560125 NZ_CAJZAS010000212.1 Protein Homology CDS 119943 120314 . - 0 ID=cds-WP_059691687.1;Parent=gene-LDO45_RS24160;Dbxref=GenBank:WP_059691687.1;Name=WP_059691687.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764300.1;locus_tag=LDO45_RS24160;product=GFA family protein;protein_id=WP_059691687.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 120483 121583 . - . ID=gene-LDO45_RS24165;Name=LDO45_RS24165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24165;old_locus_tag=BDI4_560126 NZ_CAJZAS010000212.1 Protein Homology CDS 120483 121583 . - 0 ID=cds-WP_223964029.1;Parent=gene-LDO45_RS24165;Dbxref=GenBank:WP_223964029.1;Name=WP_223964029.1;Ontology_term=GO:0004497;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757924.1;locus_tag=LDO45_RS24165;product=nitronate monooxygenase family protein;protein_id=WP_223964029.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 121777 123036 . - . ID=gene-LDO45_RS24170;Name=LDO45_RS24170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24170;old_locus_tag=BDI4_560127 NZ_CAJZAS010000212.1 Protein Homology CDS 121777 123036 . - 0 ID=cds-WP_059691689.1;Parent=gene-LDO45_RS24170;Dbxref=GenBank:WP_059691689.1;Name=WP_059691689.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352021.1;locus_tag=LDO45_RS24170;product=MFS transporter;protein_id=WP_059691689.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 123033 124235 . - . ID=gene-LDO45_RS24175;Name=LDO45_RS24175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24175;old_locus_tag=BDI4_560128 NZ_CAJZAS010000212.1 Protein Homology CDS 123033 124235 . - 0 ID=cds-WP_223964031.1;Parent=gene-LDO45_RS24175;Dbxref=GenBank:WP_223964031.1;Name=WP_223964031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018442087.1;locus_tag=LDO45_RS24175;product=YbfB/YjiJ family MFS transporter;protein_id=WP_223964031.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 124354 125280 . - . ID=gene-LDO45_RS24180;Name=LDO45_RS24180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24180;old_locus_tag=BDI4_560130 NZ_CAJZAS010000212.1 Protein Homology CDS 124354 125280 . - 0 ID=cds-WP_059691691.1;Parent=gene-LDO45_RS24180;Dbxref=GenBank:WP_059691691.1;Name=WP_059691691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352020.1;locus_tag=LDO45_RS24180;product=LysR family transcriptional regulator;protein_id=WP_059691691.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 125259 125588 . - . ID=gene-LDO45_RS24185;Name=LDO45_RS24185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24185;old_locus_tag=BDI4_560132 NZ_CAJZAS010000212.1 GeneMarkS-2+ CDS 125259 125588 . - 0 ID=cds-WP_223964033.1;Parent=gene-LDO45_RS24185;Dbxref=GenBank:WP_223964033.1;Name=WP_223964033.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS24185;product=hypothetical protein;protein_id=WP_223964033.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 125593 126645 . + . ID=gene-LDO45_RS24190;Name=LDO45_RS24190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24190;old_locus_tag=BDI4_560131 NZ_CAJZAS010000212.1 Protein Homology CDS 125593 126645 . + 0 ID=cds-WP_223964034.1;Parent=gene-LDO45_RS24190;Dbxref=GenBank:WP_223964034.1;Name=WP_223964034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363920.1;locus_tag=LDO45_RS24190;product=hypothetical protein;protein_id=WP_223964034.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 126811 127098 . + . ID=gene-LDO45_RS24195;Name=LDO45_RS24195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24195 NZ_CAJZAS010000212.1 GeneMarkS-2+ CDS 126811 127098 . + 0 ID=cds-WP_223964036.1;Parent=gene-LDO45_RS24195;Dbxref=GenBank:WP_223964036.1;Name=WP_223964036.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS24195;product=hypothetical protein;protein_id=WP_223964036.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq pseudogene 127095 128541 . + . ID=gene-LDO45_RS24200;Name=LDO45_RS24200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS24200;old_locus_tag=BDI4_560133;pseudo=true NZ_CAJZAS010000212.1 Protein Homology CDS 127095 128541 . + 0 ID=cds-LDO45_RS24200;Parent=gene-LDO45_RS24200;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328503.1;locus_tag=LDO45_RS24200;product=MFS transporter;pseudo=true;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 128613 129506 . - . ID=gene-LDO45_RS24205;Name=LDO45_RS24205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24205;old_locus_tag=BDI4_560135 NZ_CAJZAS010000212.1 Protein Homology CDS 128613 129506 . - 0 ID=cds-WP_223964038.1;Parent=gene-LDO45_RS24205;Dbxref=GenBank:WP_223964038.1;Name=WP_223964038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764304.1;locus_tag=LDO45_RS24205;product=LysR family transcriptional regulator;protein_id=WP_223964038.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 129626 130453 . - . ID=gene-LDO45_RS24210;Name=LDO45_RS24210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24210;old_locus_tag=BDI4_560136 NZ_CAJZAS010000212.1 Protein Homology CDS 129626 130453 . - 0 ID=cds-WP_223964040.1;Parent=gene-LDO45_RS24210;Dbxref=GenBank:WP_223964040.1;Name=WP_223964040.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545426.1;locus_tag=LDO45_RS24210;product=alpha/beta hydrolase;protein_id=WP_223964040.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 130687 131070 . - . ID=gene-LDO45_RS24215;Name=LDO45_RS24215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24215;old_locus_tag=BDI4_560137 NZ_CAJZAS010000212.1 Protein Homology CDS 130687 131070 . - 0 ID=cds-WP_223964042.1;Parent=gene-LDO45_RS24215;Dbxref=GenBank:WP_223964042.1;Name=WP_223964042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332064.1;locus_tag=LDO45_RS24215;product=VOC family protein;protein_id=WP_223964042.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 131096 132058 . - . ID=gene-LDO45_RS24220;Name=LDO45_RS24220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24220;old_locus_tag=BDI4_560138 NZ_CAJZAS010000212.1 Protein Homology CDS 131096 132058 . - 0 ID=cds-WP_223964044.1;Parent=gene-LDO45_RS24220;Dbxref=GenBank:WP_223964044.1;Name=WP_223964044.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476002.1;locus_tag=LDO45_RS24220;product=hydroxymethylglutaryl-CoA lyase;protein_id=WP_223964044.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 132088 133278 . - . ID=gene-LDO45_RS24225;Name=LDO45_RS24225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24225;old_locus_tag=BDI4_560139 NZ_CAJZAS010000212.1 Protein Homology CDS 132088 133278 . - 0 ID=cds-WP_223964046.1;Parent=gene-LDO45_RS24225;Dbxref=GenBank:WP_223964046.1;Name=WP_223964046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010099758.1;locus_tag=LDO45_RS24225;product=CaiB/BaiF CoA-transferase family protein;protein_id=WP_223964046.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 133277 133414 . + . ID=gene-LDO45_RS24230;Name=LDO45_RS24230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24230 NZ_CAJZAS010000212.1 GeneMarkS-2+ CDS 133277 133414 . + 0 ID=cds-WP_223964048.1;Parent=gene-LDO45_RS24230;Dbxref=GenBank:WP_223964048.1;Name=WP_223964048.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS24230;product=hypothetical protein;protein_id=WP_223964048.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 133628 133840 . - . ID=gene-LDO45_RS24235;Name=LDO45_RS24235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24235;old_locus_tag=BDI4_560140 NZ_CAJZAS010000212.1 Protein Homology CDS 133628 133840 . - 0 ID=cds-WP_059467484.1;Parent=gene-LDO45_RS24235;Dbxref=GenBank:WP_059467484.1;Name=WP_059467484.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213326.1;locus_tag=LDO45_RS24235;product=hypothetical protein;protein_id=WP_059467484.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 134092 134529 . - . ID=gene-LDO45_RS24240;Name=LDO45_RS24240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24240;old_locus_tag=BDI4_560142 NZ_CAJZAS010000212.1 Protein Homology CDS 134092 134529 . - 0 ID=cds-WP_059449716.1;Parent=gene-LDO45_RS24240;Dbxref=GenBank:WP_059449716.1;Name=WP_059449716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757918.1;locus_tag=LDO45_RS24240;product=hypothetical protein;protein_id=WP_059449716.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 134704 135627 . - . ID=gene-LDO45_RS24245;Name=LDO45_RS24245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24245;old_locus_tag=BDI4_560143 NZ_CAJZAS010000212.1 Protein Homology CDS 134704 135627 . - 0 ID=cds-WP_223964050.1;Parent=gene-LDO45_RS24245;Dbxref=GenBank:WP_223964050.1;Name=WP_223964050.1;Ontology_term=GO:0055085,GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0005886,GO:0055052;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476007.1;locus_tag=LDO45_RS24245;product=ABC transporter permease;protein_id=WP_223964050.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 135627 136499 . - . ID=gene-LDO45_RS24250;Name=LDO45_RS24250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24250;old_locus_tag=BDI4_560144 NZ_CAJZAS010000212.1 Protein Homology CDS 135627 136499 . - 0 ID=cds-WP_223964052.1;Parent=gene-LDO45_RS24250;Dbxref=GenBank:WP_223964052.1;Name=WP_223964052.1;Ontology_term=GO:0055085,GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0005886,GO:0055052;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332056.1;locus_tag=LDO45_RS24250;product=ABC transporter permease;protein_id=WP_223964052.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 136546 137625 . - . ID=gene-LDO45_RS24255;Name=LDO45_RS24255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24255;old_locus_tag=BDI4_560145 NZ_CAJZAS010000212.1 Protein Homology CDS 136546 137625 . - 0 ID=cds-WP_223964054.1;Parent=gene-LDO45_RS24255;Dbxref=GenBank:WP_223964054.1;Name=WP_223964054.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497264.1;locus_tag=LDO45_RS24255;product=ABC transporter ATP-binding protein;protein_id=WP_223964054.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 137675 138841 . - . ID=gene-LDO45_RS24260;Name=LDO45_RS24260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24260;old_locus_tag=BDI4_560146 NZ_CAJZAS010000212.1 Protein Homology CDS 137675 138841 . - 0 ID=cds-WP_059524330.1;Parent=gene-LDO45_RS24260;Dbxref=GenBank:WP_059524330.1;Name=WP_059524330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545418.1;locus_tag=LDO45_RS24260;product=ABC transporter substrate-binding protein;protein_id=WP_059524330.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 139105 139680 . - . ID=gene-LDO45_RS24265;Name=LDO45_RS24265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24265;old_locus_tag=BDI4_560147 NZ_CAJZAS010000212.1 Protein Homology CDS 139105 139680 . - 0 ID=cds-WP_223964056.1;Parent=gene-LDO45_RS24265;Dbxref=GenBank:WP_223964056.1;Name=WP_223964056.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755777.1;locus_tag=LDO45_RS24265;product=alpha/beta hydrolase;protein_id=WP_223964056.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 139703 141031 . - . ID=gene-LDO45_RS24270;Name=LDO45_RS24270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24270;old_locus_tag=BDI4_560148 NZ_CAJZAS010000212.1 Protein Homology CDS 139703 141031 . - 0 ID=cds-WP_059691702.1;Parent=gene-LDO45_RS24270;Dbxref=GenBank:WP_059691702.1;Name=WP_059691702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363902.1;locus_tag=LDO45_RS24270;product=MFS transporter;protein_id=WP_059691702.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 141188 142243 . - . ID=gene-LDO45_RS24275;Name=LDO45_RS24275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24275;old_locus_tag=BDI4_560149 NZ_CAJZAS010000212.1 Protein Homology CDS 141188 142243 . - 0 ID=cds-WP_223964058.1;Parent=gene-LDO45_RS24275;Dbxref=GenBank:WP_223964058.1;Name=WP_223964058.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351996.1;locus_tag=LDO45_RS24275;product=3-keto-5-aminohexanoate cleavage protein;protein_id=WP_223964058.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 142369 143217 . - . ID=gene-LDO45_RS24280;Name=LDO45_RS24280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24280;old_locus_tag=BDI4_560150 NZ_CAJZAS010000212.1 Protein Homology CDS 142369 143217 . - 0 ID=cds-WP_059691703.1;Parent=gene-LDO45_RS24280;Dbxref=GenBank:WP_059691703.1;Name=WP_059691703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004553974.1;locus_tag=LDO45_RS24280;product=TauD/TfdA family dioxygenase;protein_id=WP_059691703.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 143228 144208 . - . ID=gene-LDO45_RS24285;Name=LDO45_RS24285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24285;old_locus_tag=BDI4_560151 NZ_CAJZAS010000212.1 Protein Homology CDS 143228 144208 . - 0 ID=cds-WP_223964060.1;Parent=gene-LDO45_RS24285;Dbxref=GenBank:WP_223964060.1;Name=WP_223964060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656872.1;locus_tag=LDO45_RS24285;product=quinone oxidoreductase;protein_id=WP_223964060.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq gene 144242 145168 . - . ID=gene-LDO45_RS24290;Name=LDO45_RS24290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24290;old_locus_tag=BDI4_560152 NZ_CAJZAS010000212.1 Protein Homology CDS 144242 145168 . - 0 ID=cds-WP_223964062.1;Parent=gene-LDO45_RS24290;Dbxref=GenBank:WP_223964062.1;Name=WP_223964062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656871.1;locus_tag=LDO45_RS24290;product=universal stress protein;protein_id=WP_223964062.1;transl_table=11 NZ_CAJZAS010000212.1 RefSeq pseudogene 145423 147063 . + . ID=gene-LDO45_RS24295;Name=LDO45_RS24295;end_range=147063,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS24295;partial=true;pseudo=true NZ_CAJZAS010000212.1 Protein Homology CDS 145423 147063 . + 0 ID=cds-LDO45_RS24295;Parent=gene-LDO45_RS24295;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=147063,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363897.1;locus_tag=LDO45_RS24295;partial=true;product=LuxR family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000213.1 1 90871 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000213.1 RefSeq region 1 90871 . + . ID=NZ_CAJZAS010000213.1:1..90871;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_57 NZ_CAJZAS010000213.1 RefSeq gene 239 1015 . - . ID=gene-LDO45_RS24300;Name=LDO45_RS24300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24300;old_locus_tag=BDI4_570001 NZ_CAJZAS010000213.1 Protein Homology CDS 239 1015 . - 0 ID=cds-WP_059532675.1;Parent=gene-LDO45_RS24300;Dbxref=GenBank:WP_059532675.1;Name=WP_059532675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008918651.1;locus_tag=LDO45_RS24300;product=enoyl-CoA hydratase;protein_id=WP_059532675.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 1145 2851 . + . ID=gene-LDO45_RS24305;Name=paaN;gbkey=Gene;gene=paaN;gene_biotype=protein_coding;locus_tag=LDO45_RS24305;old_locus_tag=BDI4_570002 NZ_CAJZAS010000213.1 Protein Homology CDS 1145 2851 . + 0 ID=cds-WP_223964066.1;Parent=gene-LDO45_RS24305;Dbxref=GenBank:WP_223964066.1;Name=WP_223964066.1;Ontology_term=GO:0010124;gbkey=CDS;gene=paaN;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522008.1;locus_tag=LDO45_RS24305;product=phenylacetic acid degradation protein PaaN;protein_id=WP_223964066.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 2939 4141 . + . ID=gene-LDO45_RS24310;Name=pcaF;gbkey=Gene;gene=pcaF;gene_biotype=protein_coding;locus_tag=LDO45_RS24310;old_locus_tag=BDI4_570003 NZ_CAJZAS010000213.1 Protein Homology CDS 2939 4141 . + 0 ID=cds-WP_223964068.1;Parent=gene-LDO45_RS24310;Dbxref=GenBank:WP_223964068.1;Name=WP_223964068.1;Ontology_term=GO:0019619,GO:0016747;gbkey=CDS;gene=pcaF;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=3%2C4-dihydroxybenzoate catabolic process|0019619||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197326.1;locus_tag=LDO45_RS24310;product=3-oxoadipyl-CoA thiolase;protein_id=WP_223964068.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 4187 4978 . + . ID=gene-LDO45_RS24315;Name=paaG;gbkey=Gene;gene=paaG;gene_biotype=protein_coding;locus_tag=LDO45_RS24315;old_locus_tag=BDI4_570004 NZ_CAJZAS010000213.1 Protein Homology CDS 4187 4978 . + 0 ID=cds-WP_223964070.1;Parent=gene-LDO45_RS24315;Dbxref=GenBank:WP_223964070.1;Name=WP_223964070.1;Ontology_term=GO:0010124,GO:0016853;gbkey=CDS;gene=paaG;go_function=isomerase activity|0016853||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029796.1;locus_tag=LDO45_RS24315;product=2-(1%2C2-epoxy-1%2C2-dihydrophenyl)acetyl-CoA isomerase PaaG;protein_id=WP_223964070.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 4980 5432 . + . ID=gene-LDO45_RS24320;Name=paaI;gbkey=Gene;gene=paaI;gene_biotype=protein_coding;locus_tag=LDO45_RS24320;old_locus_tag=BDI4_570005 NZ_CAJZAS010000213.1 Protein Homology CDS 4980 5432 . + 0 ID=cds-WP_059532683.1;Parent=gene-LDO45_RS24320;Dbxref=GenBank:WP_059532683.1;Name=WP_059532683.1;Ontology_term=GO:0010124,GO:0016790;gbkey=CDS;gene=paaI;go_function=thiolester hydrolase activity|0016790||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546526.1;locus_tag=LDO45_RS24320;product=hydroxyphenylacetyl-CoA thioesterase PaaI;protein_id=WP_059532683.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 5471 6769 . + . ID=gene-LDO45_RS24325;Name=paaK;gbkey=Gene;gene=paaK;gene_biotype=protein_coding;locus_tag=LDO45_RS24325;old_locus_tag=BDI4_570006 NZ_CAJZAS010000213.1 Protein Homology CDS 5471 6769 . + 0 ID=cds-WP_059692319.1;Parent=gene-LDO45_RS24325;Dbxref=GenBank:WP_059692319.1;Name=WP_059692319.1;Ontology_term=GO:0010124,GO:0047475;gbkey=CDS;gene=paaK;go_function=phenylacetate-CoA ligase activity|0047475||IEA;go_process=phenylacetate catabolic process|0010124||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898201.1;locus_tag=LDO45_RS24325;product=phenylacetate--CoA ligase PaaK;protein_id=WP_059692319.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 6908 8032 . - . ID=gene-LDO45_RS24330;Name=LDO45_RS24330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24330;old_locus_tag=BDI4_570007 NZ_CAJZAS010000213.1 Protein Homology CDS 6908 8032 . - 0 ID=cds-WP_223964077.1;Parent=gene-LDO45_RS24330;Dbxref=GenBank:WP_223964077.1;Name=WP_223964077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758474.1;locus_tag=LDO45_RS24330;product=murein transglycosylase A;protein_id=WP_223964077.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 8061 8204 . + . ID=gene-LDO45_RS24335;Name=LDO45_RS24335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24335 NZ_CAJZAS010000213.1 Protein Homology CDS 8061 8204 . + 0 ID=cds-WP_006758475.1;Parent=gene-LDO45_RS24335;Dbxref=GenBank:WP_006758475.1;Name=WP_006758475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898203.1;locus_tag=LDO45_RS24335;product=hypothetical protein;protein_id=WP_006758475.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 8219 8593 . - . ID=gene-LDO45_RS24340;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=LDO45_RS24340;old_locus_tag=BDI4_570008 NZ_CAJZAS010000213.1 Protein Homology CDS 8219 8593 . - 0 ID=cds-WP_057924835.1;Parent=gene-LDO45_RS24340;Dbxref=GenBank:WP_057924835.1;Name=WP_057924835.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186878.1;locus_tag=LDO45_RS24340;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_057924835.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 8771 9457 . + . ID=gene-LDO45_RS24345;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=LDO45_RS24345;old_locus_tag=BDI4_570009 NZ_CAJZAS010000213.1 Protein Homology CDS 8771 9457 . + 0 ID=cds-WP_006482066.1;Parent=gene-LDO45_RS24345;Dbxref=GenBank:WP_006482066.1;Name=WP_006482066.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883156.1;locus_tag=LDO45_RS24345;product=ribulose-phosphate 3-epimerase;protein_id=WP_006482066.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 9462 10217 . + . ID=gene-LDO45_RS24350;Name=LDO45_RS24350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24350;old_locus_tag=BDI4_570010 NZ_CAJZAS010000213.1 Protein Homology CDS 9462 10217 . + 0 ID=cds-WP_223964079.1;Parent=gene-LDO45_RS24350;Dbxref=GenBank:WP_223964079.1;Name=WP_223964079.1;Ontology_term=GO:0005975,GO:0008967;gbkey=CDS;go_function=phosphoglycolate phosphatase activity|0008967||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655874.1;locus_tag=LDO45_RS24350;product=phosphoglycolate phosphatase;protein_id=WP_223964079.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 10576 12069 . + . ID=gene-LDO45_RS24355;Name=trpE;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=LDO45_RS24355;old_locus_tag=BDI4_570013 NZ_CAJZAS010000213.1 Protein Homology CDS 10576 12069 . + 0 ID=cds-WP_223964081.1;Parent=gene-LDO45_RS24355;Dbxref=GenBank:WP_223964081.1;Name=WP_223964081.1;Ontology_term=GO:0000162,GO:0004049;gbkey=CDS;gene=trpE;go_function=anthranilate synthase activity|0004049||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020070700.1;locus_tag=LDO45_RS24355;product=anthranilate synthase component I;protein_id=WP_223964081.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 12234 13478 . + . ID=gene-LDO45_RS24360;Name=LDO45_RS24360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24360;old_locus_tag=BDI4_570014 NZ_CAJZAS010000213.1 Protein Homology CDS 12234 13478 . + 0 ID=cds-WP_223964083.1;Parent=gene-LDO45_RS24360;Dbxref=GenBank:WP_223964083.1;Name=WP_223964083.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.5;locus_tag=LDO45_RS24360;product=site-specific integrase;protein_id=WP_223964083.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq pseudogene 14117 14454 . - . ID=gene-LDO45_RS24365;Name=LDO45_RS24365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS24365;pseudo=true NZ_CAJZAS010000213.1 Protein Homology CDS 14117 14454 . - 0 ID=cds-LDO45_RS24365;Parent=gene-LDO45_RS24365;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752645.1;locus_tag=LDO45_RS24365;product=hypothetical protein;pseudo=true;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 14947 16389 . - . ID=gene-LDO45_RS24370;Name=LDO45_RS24370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24370;old_locus_tag=BDI4_570017 NZ_CAJZAS010000213.1 Protein Homology CDS 14947 16389 . - 0 ID=cds-WP_223964085.1;Parent=gene-LDO45_RS24370;Dbxref=GenBank:WP_223964085.1;Name=WP_223964085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543921.1;locus_tag=LDO45_RS24370;product=DUF746 domain-containing protein;protein_id=WP_223964085.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 16458 17132 . - . ID=gene-LDO45_RS24375;Name=LDO45_RS24375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24375;old_locus_tag=BDI4_570018 NZ_CAJZAS010000213.1 Protein Homology CDS 16458 17132 . - 0 ID=cds-WP_223964087.1;Parent=gene-LDO45_RS24375;Dbxref=GenBank:WP_223964087.1;Name=WP_223964087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546399.1;locus_tag=LDO45_RS24375;product=DUF799 domain-containing protein;protein_id=WP_223964087.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 17143 17511 . - . ID=gene-LDO45_RS24380;Name=LDO45_RS24380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24380;old_locus_tag=BDI4_570019 NZ_CAJZAS010000213.1 Protein Homology CDS 17143 17511 . - 0 ID=cds-WP_223964089.1;Parent=gene-LDO45_RS24380;Dbxref=GenBank:WP_223964089.1;Name=WP_223964089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364887.1;locus_tag=LDO45_RS24380;product=DUF4810 domain-containing protein;protein_id=WP_223964089.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 17557 18234 . - . ID=gene-LDO45_RS24385;Name=LDO45_RS24385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24385;old_locus_tag=BDI4_570020 NZ_CAJZAS010000213.1 Protein Homology CDS 17557 18234 . - 0 ID=cds-WP_223964091.1;Parent=gene-LDO45_RS24385;Dbxref=GenBank:WP_223964091.1;Name=WP_223964091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416274.1;locus_tag=LDO45_RS24385;product=CsgG/HfaB family protein;protein_id=WP_223964091.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 18783 19367 . - . ID=gene-LDO45_RS24390;Name=LDO45_RS24390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24390;old_locus_tag=BDI4_570023 NZ_CAJZAS010000213.1 Protein Homology CDS 18783 19367 . - 0 ID=cds-WP_223964093.1;Parent=gene-LDO45_RS24390;Dbxref=GenBank:WP_223964093.1;Name=WP_223964093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543964.1;locus_tag=LDO45_RS24390;product=hypothetical protein;protein_id=WP_223964093.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 19772 21529 . - . ID=gene-LDO45_RS24395;Name=LDO45_RS24395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24395;old_locus_tag=BDI4_570025 NZ_CAJZAS010000213.1 Protein Homology CDS 19772 21529 . - 0 ID=cds-WP_223964095.1;Parent=gene-LDO45_RS24395;Dbxref=GenBank:WP_223964095.1;Name=WP_223964095.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004548975.1;locus_tag=LDO45_RS24395;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_223964095.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 21708 22064 . - . ID=gene-LDO45_RS24400;Name=LDO45_RS24400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24400 NZ_CAJZAS010000213.1 GeneMarkS-2+ CDS 21708 22064 . - 0 ID=cds-WP_223964097.1;Parent=gene-LDO45_RS24400;Dbxref=GenBank:WP_223964097.1;Name=WP_223964097.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS24400;product=hypothetical protein;protein_id=WP_223964097.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 22515 33143 . - . ID=gene-LDO45_RS24405;Name=LDO45_RS24405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24405;old_locus_tag=BDI4_570027 NZ_CAJZAS010000213.1 Protein Homology CDS 22515 33143 . - 0 ID=cds-WP_223964099.1;Parent=gene-LDO45_RS24405;Dbxref=GenBank:WP_223964099.1;Name=WP_223964099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013338345.1;locus_tag=LDO45_RS24405;product=hemagglutinin repeat-containing protein;protein_id=WP_223964099.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 33830 34750 . - . ID=gene-LDO45_RS24410;Name=LDO45_RS24410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24410;old_locus_tag=BDI4_570028 NZ_CAJZAS010000213.1 Protein Homology CDS 33830 34750 . - 0 ID=cds-WP_223964101.1;Parent=gene-LDO45_RS24410;Dbxref=GenBank:WP_223964101.1;Name=WP_223964101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006217897.1;locus_tag=LDO45_RS24410;product=plasmid partitioning protein RepB C-terminal domain-containing protein;protein_id=WP_223964101.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 34750 35637 . - . ID=gene-LDO45_RS24415;Name=LDO45_RS24415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24415;old_locus_tag=BDI4_570029 NZ_CAJZAS010000213.1 Protein Homology CDS 34750 35637 . - 0 ID=cds-WP_223964103.1;Parent=gene-LDO45_RS24415;Dbxref=GenBank:WP_223964103.1;Name=WP_223964103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006217898.1;locus_tag=LDO45_RS24415;product=plasmid partitioning protein RepB C-terminal domain-containing protein;protein_id=WP_223964103.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 35634 37433 . - . ID=gene-LDO45_RS24420;Name=LDO45_RS24420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24420;old_locus_tag=BDI4_570030 NZ_CAJZAS010000213.1 Protein Homology CDS 35634 37433 . - 0 ID=cds-WP_308051263.1;Parent=gene-LDO45_RS24420;Dbxref=GenBank:WP_308051263.1;Name=WP_308051263.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004629342.1;locus_tag=LDO45_RS24420;product=recombinase family protein;protein_id=WP_308051263.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 37661 38173 . + . ID=gene-LDO45_RS24425;Name=LDO45_RS24425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24425;old_locus_tag=BDI4_570032 NZ_CAJZAS010000213.1 GeneMarkS-2+ CDS 37661 38173 . + 0 ID=cds-WP_223964104.1;Parent=gene-LDO45_RS24425;Dbxref=GenBank:WP_223964104.1;Name=WP_223964104.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS24425;product=hypothetical protein;protein_id=WP_223964104.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 38300 38449 . + . ID=gene-LDO45_RS24430;Name=LDO45_RS24430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24430 NZ_CAJZAS010000213.1 Protein Homology CDS 38300 38449 . + 0 ID=cds-WP_223964107.1;Parent=gene-LDO45_RS24430;Dbxref=GenBank:WP_223964107.1;Name=WP_223964107.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602449.1;locus_tag=LDO45_RS24430;product=hypothetical protein;protein_id=WP_223964107.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 38442 38918 . + . ID=gene-LDO45_RS24435;Name=LDO45_RS24435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24435;old_locus_tag=BDI4_570033 NZ_CAJZAS010000213.1 Protein Homology CDS 38442 38918 . + 0 ID=cds-WP_223964109.1;Parent=gene-LDO45_RS24435;Dbxref=GenBank:WP_223964109.1;Name=WP_223964109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602112.1;locus_tag=LDO45_RS24435;product=hypothetical protein;protein_id=WP_223964109.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 39015 39983 . + . ID=gene-LDO45_RS24440;Name=LDO45_RS24440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24440;old_locus_tag=BDI4_570034 NZ_CAJZAS010000213.1 Protein Homology CDS 39015 39983 . + 0 ID=cds-WP_223964111.1;Parent=gene-LDO45_RS24440;Dbxref=GenBank:WP_223964111.1;Name=WP_223964111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481790.1;locus_tag=LDO45_RS24440;product=DUF932 domain-containing protein;protein_id=WP_223964111.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 39980 40180 . + . ID=gene-LDO45_RS24445;Name=LDO45_RS24445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24445;old_locus_tag=BDI4_570035 NZ_CAJZAS010000213.1 Protein Homology CDS 39980 40180 . + 0 ID=cds-WP_223964113.1;Parent=gene-LDO45_RS24445;Dbxref=GenBank:WP_223964113.1;Name=WP_223964113.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481830.1;locus_tag=LDO45_RS24445;product=hypothetical protein;protein_id=WP_223964113.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq pseudogene 40248 41244 . + . ID=gene-LDO45_RS24450;Name=LDO45_RS24450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS24450;old_locus_tag=BDI4_570037;pseudo=true NZ_CAJZAS010000213.1 Protein Homology CDS 40248 41244 . + 0 ID=cds-LDO45_RS24450;Parent=gene-LDO45_RS24450;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486515.1;locus_tag=LDO45_RS24450;product=YqaJ viral recombinase family protein;pseudo=true;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 41258 41485 . + . ID=gene-LDO45_RS24455;Name=LDO45_RS24455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24455;old_locus_tag=BDI4_570038 NZ_CAJZAS010000213.1 Protein Homology CDS 41258 41485 . + 0 ID=cds-WP_223964115.1;Parent=gene-LDO45_RS24455;Dbxref=GenBank:WP_223964115.1;Name=WP_223964115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397367.1;locus_tag=LDO45_RS24455;product=hypothetical protein;protein_id=WP_223964115.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 41544 42449 . + . ID=gene-LDO45_RS24460;Name=LDO45_RS24460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24460;old_locus_tag=BDI4_570039 NZ_CAJZAS010000213.1 Protein Homology CDS 41544 42449 . + 0 ID=cds-WP_223964117.1;Parent=gene-LDO45_RS24460;Dbxref=GenBank:WP_223964117.1;Name=WP_223964117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481839.1;locus_tag=LDO45_RS24460;product=phage capsid protein;protein_id=WP_223964117.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 42446 43540 . + . ID=gene-LDO45_RS24465;Name=LDO45_RS24465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24465;old_locus_tag=BDI4_570040 NZ_CAJZAS010000213.1 Protein Homology CDS 42446 43540 . + 0 ID=cds-WP_223964119.1;Parent=gene-LDO45_RS24465;Dbxref=GenBank:WP_223964119.1;Name=WP_223964119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481748.1;locus_tag=LDO45_RS24465;product=hypothetical protein;protein_id=WP_223964119.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 43607 44413 . + . ID=gene-LDO45_RS24470;Name=LDO45_RS24470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24470;old_locus_tag=BDI4_570041 NZ_CAJZAS010000213.1 Protein Homology CDS 43607 44413 . + 0 ID=cds-WP_223964121.1;Parent=gene-LDO45_RS24470;Dbxref=GenBank:WP_223964121.1;Name=WP_223964121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481767.1;locus_tag=LDO45_RS24470;product=DUF4942 domain-containing protein;protein_id=WP_223964121.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 44512 44916 . + . ID=gene-LDO45_RS24475;Name=LDO45_RS24475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24475;old_locus_tag=BDI4_570042 NZ_CAJZAS010000213.1 GeneMarkS-2+ CDS 44512 44916 . + 0 ID=cds-WP_223964123.1;Parent=gene-LDO45_RS24475;Dbxref=GenBank:WP_223964123.1;Name=WP_223964123.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS24475;product=hypothetical protein;protein_id=WP_223964123.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 44998 45297 . + . ID=gene-LDO45_RS24480;Name=LDO45_RS24480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24480;old_locus_tag=BDI4_570043 NZ_CAJZAS010000213.1 Protein Homology CDS 44998 45297 . + 0 ID=cds-WP_223964125.1;Parent=gene-LDO45_RS24480;Dbxref=GenBank:WP_223964125.1;Name=WP_223964125.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492477.1;locus_tag=LDO45_RS24480;product=hypothetical protein;protein_id=WP_223964125.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 45299 45940 . + . ID=gene-LDO45_RS24485;Name=LDO45_RS24485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24485;old_locus_tag=BDI4_570044 NZ_CAJZAS010000213.1 Protein Homology CDS 45299 45940 . + 0 ID=cds-WP_223964127.1;Parent=gene-LDO45_RS24485;Dbxref=GenBank:WP_223964127.1;Name=WP_223964127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486517.1;locus_tag=LDO45_RS24485;product=hypothetical protein;protein_id=WP_223964127.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 46189 46530 . - . ID=gene-LDO45_RS24490;Name=LDO45_RS24490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24490;old_locus_tag=BDI4_570046 NZ_CAJZAS010000213.1 Protein Homology CDS 46189 46530 . - 0 ID=cds-WP_223964196.1;Parent=gene-LDO45_RS24490;Dbxref=GenBank:WP_223964196.1;Name=WP_223964196.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020748834.1;locus_tag=LDO45_RS24490;product=helix-turn-helix domain-containing protein;protein_id=WP_223964196.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 46720 48726 . + . ID=gene-LDO45_RS24495;Name=LDO45_RS24495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24495;old_locus_tag=BDI4_570047 NZ_CAJZAS010000213.1 Protein Homology CDS 46720 48726 . + 0 ID=cds-WP_223964129.1;Parent=gene-LDO45_RS24495;Dbxref=GenBank:WP_223964129.1;Name=WP_223964129.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397376.1;locus_tag=LDO45_RS24495;product=acyltransferase family protein;protein_id=WP_223964129.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 48916 49575 . + . ID=gene-LDO45_RS24500;Name=LDO45_RS24500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24500;old_locus_tag=BDI4_570048 NZ_CAJZAS010000213.1 GeneMarkS-2+ CDS 48916 49575 . + 0 ID=cds-WP_223964131.1;Parent=gene-LDO45_RS24500;Dbxref=GenBank:WP_223964131.1;Name=WP_223964131.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS24500;product=hypothetical protein;protein_id=WP_223964131.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 49674 49994 . + . ID=gene-LDO45_RS24505;Name=LDO45_RS24505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24505;old_locus_tag=BDI4_570050 NZ_CAJZAS010000213.1 GeneMarkS-2+ CDS 49674 49994 . + 0 ID=cds-WP_223964133.1;Parent=gene-LDO45_RS24505;Dbxref=GenBank:WP_223964133.1;Name=WP_223964133.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS24505;product=hypothetical protein;protein_id=WP_223964133.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 50685 50876 . + . ID=gene-LDO45_RS24510;Name=LDO45_RS24510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24510;old_locus_tag=BDI4_570051 NZ_CAJZAS010000213.1 Protein Homology CDS 50685 50876 . + 0 ID=cds-WP_223964135.1;Parent=gene-LDO45_RS24510;Dbxref=GenBank:WP_223964135.1;Name=WP_223964135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007586026.1;locus_tag=LDO45_RS24510;product=hypothetical protein;protein_id=WP_223964135.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 50938 51375 . + . ID=gene-LDO45_RS24515;Name=LDO45_RS24515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24515;old_locus_tag=BDI4_570052 NZ_CAJZAS010000213.1 Protein Homology CDS 50938 51375 . + 0 ID=cds-WP_223964137.1;Parent=gene-LDO45_RS24515;Dbxref=GenBank:WP_223964137.1;Name=WP_223964137.1;Ontology_term=GO:0005515,GO:0016279,GO:1904047;gbkey=CDS;go_function=protein binding|0005515||IEA,protein-lysine N-methyltransferase activity|0016279||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007583683.1;locus_tag=LDO45_RS24515;product=SET domain-containing protein;protein_id=WP_223964137.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 51430 51756 . + . ID=gene-LDO45_RS24520;Name=LDO45_RS24520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24520;old_locus_tag=BDI4_570053 NZ_CAJZAS010000213.1 Protein Homology CDS 51430 51756 . + 0 ID=cds-WP_223964139.1;Parent=gene-LDO45_RS24520;Dbxref=GenBank:WP_223964139.1;Name=WP_223964139.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337233.1;locus_tag=LDO45_RS24520;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_223964139.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 51761 52510 . - . ID=gene-LDO45_RS24525;Name=LDO45_RS24525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24525;old_locus_tag=BDI4_570054 NZ_CAJZAS010000213.1 GeneMarkS-2+ CDS 51761 52510 . - 0 ID=cds-WP_223964141.1;Parent=gene-LDO45_RS24525;Dbxref=GenBank:WP_223964141.1;Name=WP_223964141.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS24525;product=hypothetical protein;protein_id=WP_223964141.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 52911 54515 . + . ID=gene-LDO45_RS24530;Name=LDO45_RS24530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24530;old_locus_tag=BDI4_570055 NZ_CAJZAS010000213.1 Protein Homology CDS 52911 54515 . + 0 ID=cds-WP_223964143.1;Parent=gene-LDO45_RS24530;Dbxref=GenBank:WP_223964143.1;Name=WP_223964143.1;Ontology_term=GO:0006306,GO:0003677,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=obsolete DNA methylation|0006306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006220086.1;locus_tag=LDO45_RS24530;product=site-specific DNA-methyltransferase;protein_id=WP_223964143.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 54519 57230 . + . ID=gene-LDO45_RS24535;Name=LDO45_RS24535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24535;old_locus_tag=BDI4_570056 NZ_CAJZAS010000213.1 Protein Homology CDS 54519 57230 . + 0 ID=cds-WP_223964145.1;Parent=gene-LDO45_RS24535;Dbxref=GenBank:WP_223964145.1;Name=WP_223964145.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005673694.1;locus_tag=LDO45_RS24535;product=DEAD/DEAH box helicase;protein_id=WP_223964145.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 57324 57959 . - . ID=gene-LDO45_RS24540;Name=LDO45_RS24540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24540;old_locus_tag=BDI4_570057 NZ_CAJZAS010000213.1 Protein Homology CDS 57324 57959 . - 0 ID=cds-WP_223964147.1;Parent=gene-LDO45_RS24540;Dbxref=GenBank:WP_223964147.1;Name=WP_223964147.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011402471.1;locus_tag=LDO45_RS24540;product=GIY-YIG nuclease family protein;protein_id=WP_223964147.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 58212 59015 . + . ID=gene-LDO45_RS24545;Name=LDO45_RS24545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24545;old_locus_tag=BDI4_570058 NZ_CAJZAS010000213.1 Protein Homology CDS 58212 59015 . + 0 ID=cds-WP_223964149.1;Parent=gene-LDO45_RS24545;Dbxref=GenBank:WP_223964149.1;Name=WP_223964149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011514858.1;locus_tag=LDO45_RS24545;product=hypothetical protein;protein_id=WP_223964149.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 59040 59816 . + . ID=gene-LDO45_RS24550;Name=LDO45_RS24550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24550;old_locus_tag=BDI4_570059 NZ_CAJZAS010000213.1 Protein Homology CDS 59040 59816 . + 0 ID=cds-WP_223964151.1;Parent=gene-LDO45_RS24550;Dbxref=GenBank:WP_223964151.1;Name=WP_223964151.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020200518.1;locus_tag=LDO45_RS24550;product=nucleotidyltransferase;protein_id=WP_223964151.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 59928 60692 . - . ID=gene-LDO45_RS24555;Name=LDO45_RS24555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24555;old_locus_tag=BDI4_570060 NZ_CAJZAS010000213.1 Protein Homology CDS 59928 60692 . - 0 ID=cds-WP_223964153.1;Parent=gene-LDO45_RS24555;Dbxref=GenBank:WP_223964153.1;Name=WP_223964153.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020067286.1;locus_tag=LDO45_RS24555;product=hypothetical protein;protein_id=WP_223964153.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 60758 61045 . - . ID=gene-LDO45_RS24560;Name=LDO45_RS24560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24560;old_locus_tag=BDI4_570061 NZ_CAJZAS010000213.1 GeneMarkS-2+ CDS 60758 61045 . - 0 ID=cds-WP_223964155.1;Parent=gene-LDO45_RS24560;Dbxref=GenBank:WP_223964155.1;Name=WP_223964155.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS24560;product=hypothetical protein;protein_id=WP_223964155.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 61229 62542 . - . ID=gene-LDO45_RS24565;Name=LDO45_RS24565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24565;old_locus_tag=BDI4_570062 NZ_CAJZAS010000213.1 Protein Homology CDS 61229 62542 . - 0 ID=cds-WP_223964157.1;Parent=gene-LDO45_RS24565;Dbxref=GenBank:WP_223964157.1;Name=WP_223964157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481816.1;locus_tag=LDO45_RS24565;product=nucleotidyltransferase;protein_id=WP_223964157.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 62899 63222 . + . ID=gene-LDO45_RS24570;Name=LDO45_RS24570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24570;old_locus_tag=BDI4_570064 NZ_CAJZAS010000213.1 Protein Homology CDS 62899 63222 . + 0 ID=cds-WP_223964159.1;Parent=gene-LDO45_RS24570;Dbxref=GenBank:WP_223964159.1;Name=WP_223964159.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481786.1;locus_tag=LDO45_RS24570;product=helix-turn-helix domain-containing protein;protein_id=WP_223964159.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 63251 64084 . + . ID=gene-LDO45_RS24575;Name=LDO45_RS24575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24575;old_locus_tag=BDI4_570065 NZ_CAJZAS010000213.1 Protein Homology CDS 63251 64084 . + 0 ID=cds-WP_223964161.1;Parent=gene-LDO45_RS24575;Dbxref=GenBank:WP_223964161.1;Name=WP_223964161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481789.1;locus_tag=LDO45_RS24575;product=ImmA/IrrE family metallo-endopeptidase;protein_id=WP_223964161.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 64335 65279 . - . ID=gene-LDO45_RS24580;Name=LDO45_RS24580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24580;old_locus_tag=BDI4_570067 NZ_CAJZAS010000213.1 GeneMarkS-2+ CDS 64335 65279 . - 0 ID=cds-WP_223964163.1;Parent=gene-LDO45_RS24580;Dbxref=GenBank:WP_223964163.1;Name=WP_223964163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS24580;product=hypothetical protein;protein_id=WP_223964163.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 65560 66732 . - . ID=gene-LDO45_RS24585;Name=LDO45_RS24585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24585;old_locus_tag=BDI4_570068 NZ_CAJZAS010000213.1 GeneMarkS-2+ CDS 65560 66732 . - 0 ID=cds-WP_223964165.1;Parent=gene-LDO45_RS24585;Dbxref=GenBank:WP_223964165.1;Name=WP_223964165.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS24585;product=inovirus-type Gp2 protein;protein_id=WP_223964165.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 67613 68824 . - . ID=gene-LDO45_RS24590;Name=LDO45_RS24590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24590;old_locus_tag=BDI4_570069 NZ_CAJZAS010000213.1 GeneMarkS-2+ CDS 67613 68824 . - 0 ID=cds-WP_223964167.1;Parent=gene-LDO45_RS24590;Dbxref=GenBank:WP_223964167.1;Name=WP_223964167.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS24590;product=inovirus-type Gp2 protein;protein_id=WP_223964167.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 68821 69978 . - . ID=gene-LDO45_RS24595;Name=LDO45_RS24595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24595;old_locus_tag=BDI4_570070 NZ_CAJZAS010000213.1 GeneMarkS-2+ CDS 68821 69978 . - 0 ID=cds-WP_223964169.1;Parent=gene-LDO45_RS24595;Dbxref=GenBank:WP_223964169.1;Name=WP_223964169.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS24595;product=hypothetical protein;protein_id=WP_223964169.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 70132 71889 . - . ID=gene-LDO45_RS24600;Name=LDO45_RS24600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24600;old_locus_tag=BDI4_570071 NZ_CAJZAS010000213.1 Protein Homology CDS 70132 71889 . - 0 ID=cds-WP_223964171.1;Parent=gene-LDO45_RS24600;Dbxref=GenBank:WP_223964171.1;Name=WP_223964171.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024547.5;locus_tag=LDO45_RS24600;product=DUF3987 domain-containing protein;protein_id=WP_223964171.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 71905 72135 . - . ID=gene-LDO45_RS24605;Name=LDO45_RS24605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24605;old_locus_tag=BDI4_570072 NZ_CAJZAS010000213.1 Protein Homology CDS 71905 72135 . - 0 ID=cds-WP_223964172.1;Parent=gene-LDO45_RS24605;Dbxref=GenBank:WP_223964172.1;Name=WP_223964172.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017772461.1;locus_tag=LDO45_RS24605;product=AlpA family transcriptional regulator;protein_id=WP_223964172.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 72499 73158 . - . ID=gene-LDO45_RS24610;Name=LDO45_RS24610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24610;old_locus_tag=BDI4_570073 NZ_CAJZAS010000213.1 GeneMarkS-2+ CDS 72499 73158 . - 0 ID=cds-WP_223964174.1;Parent=gene-LDO45_RS24610;Dbxref=GenBank:WP_223964174.1;Name=WP_223964174.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS24610;product=hypothetical protein;protein_id=WP_223964174.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 73567 74166 . + . ID=gene-LDO45_RS24615;Name=LDO45_RS24615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24615;old_locus_tag=BDI4_570074 NZ_CAJZAS010000213.1 Protein Homology CDS 73567 74166 . + 0 ID=cds-WP_059532695.1;Parent=gene-LDO45_RS24615;Dbxref=GenBank:WP_059532695.1;Name=WP_059532695.1;Ontology_term=GO:0000162,GO:0004049,GO:0046820;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA,4-amino-4-deoxychorismate synthase activity|0046820||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898208.1;locus_tag=LDO45_RS24615;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_059532695.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 74180 75211 . + . ID=gene-LDO45_RS24620;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=LDO45_RS24620;old_locus_tag=BDI4_570075 NZ_CAJZAS010000213.1 Protein Homology CDS 74180 75211 . + 0 ID=cds-WP_059702638.1;Parent=gene-LDO45_RS24620;Dbxref=GenBank:WP_059702638.1;Name=WP_059702638.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406908.1;locus_tag=LDO45_RS24620;product=anthranilate phosphoribosyltransferase;protein_id=WP_059702638.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 75241 76026 . + . ID=gene-LDO45_RS24625;Name=trpC;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;locus_tag=LDO45_RS24625;old_locus_tag=BDI4_570077 NZ_CAJZAS010000213.1 Protein Homology CDS 75241 76026 . + 0 ID=cds-WP_059532701.1;Parent=gene-LDO45_RS24625;Dbxref=GenBank:WP_059532701.1;Name=WP_059532701.1;Ontology_term=GO:0006568,GO:0004425;gbkey=CDS;gene=trpC;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA;go_process=tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106662.1;locus_tag=LDO45_RS24625;product=indole-3-glycerol phosphate synthase TrpC;protein_id=WP_059532701.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 76026 76652 . + . ID=gene-LDO45_RS24630;Name=LDO45_RS24630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24630;old_locus_tag=BDI4_570076 NZ_CAJZAS010000213.1 Protein Homology CDS 76026 76652 . + 0 ID=cds-WP_223964176.1;Parent=gene-LDO45_RS24630;Dbxref=GenBank:WP_223964176.1;Name=WP_223964176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363008.1;locus_tag=LDO45_RS24630;product=CYTH domain-containing protein;protein_id=WP_223964176.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 76666 77562 . + . ID=gene-LDO45_RS24635;Name=LDO45_RS24635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24635;old_locus_tag=BDI4_570078 NZ_CAJZAS010000213.1 Protein Homology CDS 76666 77562 . + 0 ID=cds-WP_223964178.1;Parent=gene-LDO45_RS24635;Dbxref=GenBank:WP_223964178.1;Name=WP_223964178.1;Ontology_term=GO:0006281,GO:0006284,GO:0004844;gbkey=CDS;go_function=uracil DNA N-glycosylase activity|0004844||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363007.1;locus_tag=LDO45_RS24635;product=uracil-DNA glycosylase;protein_id=WP_223964178.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 77680 78276 . - . ID=gene-LDO45_RS24640;Name=LDO45_RS24640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24640;old_locus_tag=BDI4_570079 NZ_CAJZAS010000213.1 Protein Homology CDS 77680 78276 . - 0 ID=cds-WP_223964180.1;Parent=gene-LDO45_RS24640;Dbxref=GenBank:WP_223964180.1;Name=WP_223964180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363006.1;locus_tag=LDO45_RS24640;product=FMN-dependent NADH-azoreductase;protein_id=WP_223964180.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 78424 80223 . - . ID=gene-LDO45_RS24645;Name=LDO45_RS24645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24645;old_locus_tag=BDI4_570080 NZ_CAJZAS010000213.1 Protein Homology CDS 78424 80223 . - 0 ID=cds-WP_223964182.1;Parent=gene-LDO45_RS24645;Dbxref=GenBank:WP_223964182.1;Name=WP_223964182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350810.1;locus_tag=LDO45_RS24645;product=M61 family metallopeptidase;protein_id=WP_223964182.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 80339 81067 . - . ID=gene-LDO45_RS24650;Name=LDO45_RS24650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24650;old_locus_tag=BDI4_570081 NZ_CAJZAS010000213.1 Protein Homology CDS 80339 81067 . - 0 ID=cds-WP_059702632.1;Parent=gene-LDO45_RS24650;Dbxref=GenBank:WP_059702632.1;Name=WP_059702632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758486.1;locus_tag=LDO45_RS24650;product=DsbC family protein;protein_id=WP_059702632.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 81158 82336 . - . ID=gene-LDO45_RS24655;Name=LDO45_RS24655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24655;old_locus_tag=BDI4_570082 NZ_CAJZAS010000213.1 Protein Homology CDS 81158 82336 . - 0 ID=cds-WP_223964184.1;Parent=gene-LDO45_RS24655;Dbxref=GenBank:WP_223964184.1;Name=WP_223964184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214205.1;locus_tag=LDO45_RS24655;product=UbiH/UbiF family hydroxylase;protein_id=WP_223964184.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 82584 83678 . + . ID=gene-LDO45_RS24660;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=LDO45_RS24660;old_locus_tag=BDI4_570083 NZ_CAJZAS010000213.1 Protein Homology CDS 82584 83678 . + 0 ID=cds-WP_059532716.1;Parent=gene-LDO45_RS24660;Dbxref=GenBank:WP_059532716.1;Name=WP_059532716.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477050.1;locus_tag=LDO45_RS24660;product=redox-regulated ATPase YchF;protein_id=WP_059532716.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 83845 85236 . - . ID=gene-LDO45_RS24665;Name=gabP;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=LDO45_RS24665;old_locus_tag=BDI4_570084 NZ_CAJZAS010000213.1 Protein Homology CDS 83845 85236 . - 0 ID=cds-WP_223964186.1;Parent=gene-LDO45_RS24665;Dbxref=GenBank:WP_223964186.1;Name=WP_223964186.1;Ontology_term=GO:0015812,GO:0015185,GO:0016020;gbkey=CDS;gene=gabP;go_component=membrane|0016020||IEA;go_function=gamma-aminobutyric acid transmembrane transporter activity|0015185||IEA;go_process=gamma-aminobutyric acid transport|0015812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477053.1;locus_tag=LDO45_RS24665;product=GABA permease;protein_id=WP_223964186.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 85705 86049 . - . ID=gene-LDO45_RS24670;Name=LDO45_RS24670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24670;old_locus_tag=BDI4_570086 NZ_CAJZAS010000213.1 Protein Homology CDS 85705 86049 . - 0 ID=cds-WP_223964188.1;Parent=gene-LDO45_RS24670;Dbxref=GenBank:WP_223964188.1;Name=WP_223964188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752681.1;locus_tag=LDO45_RS24670;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_223964188.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 86154 87416 . - . ID=gene-LDO45_RS24675;Name=LDO45_RS24675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24675;old_locus_tag=BDI4_570087 NZ_CAJZAS010000213.1 Protein Homology CDS 86154 87416 . - 0 ID=cds-WP_223964190.1;Parent=gene-LDO45_RS24675;Dbxref=GenBank:WP_223964190.1;Name=WP_223964190.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655859.1;locus_tag=LDO45_RS24675;product=MFS transporter;protein_id=WP_223964190.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 87609 88526 . + . ID=gene-LDO45_RS24680;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=LDO45_RS24680;old_locus_tag=BDI4_570088 NZ_CAJZAS010000213.1 Protein Homology CDS 87609 88526 . + 0 ID=cds-WP_223964192.1;Parent=gene-LDO45_RS24680;Dbxref=GenBank:WP_223964192.1;Name=WP_223964192.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=gcvA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655858.1;locus_tag=LDO45_RS24680;product=transcriptional regulator GcvA;protein_id=WP_223964192.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 88616 88924 . + . ID=gene-LDO45_RS24685;Name=LDO45_RS24685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24685;old_locus_tag=BDI4_570089 NZ_CAJZAS010000213.1 Protein Homology CDS 88616 88924 . + 0 ID=cds-WP_059532727.1;Parent=gene-LDO45_RS24685;Dbxref=GenBank:WP_059532727.1;Name=WP_059532727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494399.1;locus_tag=LDO45_RS24685;product=DUF3761 domain-containing protein;protein_id=WP_059532727.1;transl_table=11 NZ_CAJZAS010000213.1 RefSeq gene 89114 90781 . + . ID=gene-LDO45_RS24690;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=LDO45_RS24690;old_locus_tag=BDI4_570090 NZ_CAJZAS010000213.1 Protein Homology CDS 89114 90781 . + 0 ID=cds-WP_059532730.1;Parent=gene-LDO45_RS24690;Dbxref=GenBank:WP_059532730.1;Name=WP_059532730.1;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004186903.1;locus_tag=LDO45_RS24690;product=energy-dependent translational throttle protein EttA;protein_id=WP_059532730.1;transl_table=11 ##sequence-region NZ_CAJZAS010000214.1 1 60533 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000214.1 RefSeq region 1 60533 . + . ID=NZ_CAJZAS010000214.1:1..60533;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_58 NZ_CAJZAS010000214.1 RefSeq gene 1 331 . + . ID=gene-LDO45_RS24695;Name=LDO45_RS24695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24695;old_locus_tag=BDI4_580001;partial=true;start_range=.,1 NZ_CAJZAS010000214.1 Protein Homology CDS 1 331 . + 1 ID=cds-WP_223964199.1;Parent=gene-LDO45_RS24695;Dbxref=GenBank:WP_223964199.1;Name=WP_223964199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216420.1;locus_tag=LDO45_RS24695;partial=true;product=YadA C-terminal domain-containing protein;protein_id=WP_223964199.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 1365 1748 . + . ID=gene-LDO45_RS24700;Name=LDO45_RS24700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24700;old_locus_tag=BDI4_580005 NZ_CAJZAS010000214.1 Protein Homology CDS 1365 1748 . + 0 ID=cds-WP_223964201.1;Parent=gene-LDO45_RS24700;Dbxref=GenBank:WP_223964201.1;Name=WP_223964201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008919003.1;locus_tag=LDO45_RS24700;product=DUF3597 domain-containing protein;protein_id=WP_223964201.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 1853 2104 . + . ID=gene-LDO45_RS24705;Name=LDO45_RS24705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24705;old_locus_tag=BDI4_580006 NZ_CAJZAS010000214.1 Protein Homology CDS 1853 2104 . + 0 ID=cds-WP_223964203.1;Parent=gene-LDO45_RS24705;Dbxref=GenBank:WP_223964203.1;Name=WP_223964203.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019447529.1;locus_tag=LDO45_RS24705;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_223964203.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 2477 2971 . + . ID=gene-LDO45_RS24710;Name=LDO45_RS24710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24710 NZ_CAJZAS010000214.1 Protein Homology CDS 2477 2971 . + 0 ID=cds-WP_374109549.1;Parent=gene-LDO45_RS24710;Dbxref=GenBank:WP_374109549.1;Name=WP_374109549.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00413.1;locus_tag=LDO45_RS24710;product=septal ring lytic transglycosylase RlpA family protein;protein_id=WP_374109549.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 4034 4750 . + . ID=gene-LDO45_RS24715;Name=LDO45_RS24715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24715;old_locus_tag=BDI4_580009 NZ_CAJZAS010000214.1 Protein Homology CDS 4034 4750 . + 0 ID=cds-WP_223964205.1;Parent=gene-LDO45_RS24715;Dbxref=GenBank:WP_223964205.1;Name=WP_223964205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754336.1;locus_tag=LDO45_RS24715;product=OmpA family protein;protein_id=WP_223964205.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 5686 6012 . + . ID=gene-LDO45_RS24720;Name=LDO45_RS24720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24720 NZ_CAJZAS010000214.1 GeneMarkS-2+ CDS 5686 6012 . + 0 ID=cds-WP_223964206.1;Parent=gene-LDO45_RS24720;Dbxref=GenBank:WP_223964206.1;Name=WP_223964206.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS24720;product=hypothetical protein;protein_id=WP_223964206.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 6944 8074 . + . ID=gene-LDO45_RS24725;Name=LDO45_RS24725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24725;old_locus_tag=BDI4_580014 NZ_CAJZAS010000214.1 GeneMarkS-2+ CDS 6944 8074 . + 0 ID=cds-WP_223964208.1;Parent=gene-LDO45_RS24725;Dbxref=GenBank:WP_223964208.1;Name=WP_223964208.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS24725;product=hypothetical protein;protein_id=WP_223964208.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq pseudogene 8196 9134 . - . ID=gene-LDO45_RS24730;Name=LDO45_RS24730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS24730;pseudo=true NZ_CAJZAS010000214.1 Protein Homology CDS 8196 9134 . - 0 ID=cds-LDO45_RS24730;Parent=gene-LDO45_RS24730;Note=frameshifted%3B internal stop;Ontology_term=GO:0015074;gbkey=CDS;go_process=DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611481.1;locus_tag=LDO45_RS24730;product=integrase core domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 9526 10296 . - . ID=gene-LDO45_RS24735;Name=LDO45_RS24735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24735;old_locus_tag=BDI4_580018 NZ_CAJZAS010000214.1 Protein Homology CDS 9526 10296 . - 0 ID=cds-WP_223964210.1;Parent=gene-LDO45_RS24735;Dbxref=GenBank:WP_223964210.1;Name=WP_223964210.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008923316.1;locus_tag=LDO45_RS24735;product=response regulator transcription factor;protein_id=WP_223964210.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 11924 12847 . + . ID=gene-LDO45_RS24740;Name=LDO45_RS24740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24740;old_locus_tag=BDI4_580022 NZ_CAJZAS010000214.1 Protein Homology CDS 11924 12847 . + 0 ID=cds-WP_223964212.1;Parent=gene-LDO45_RS24740;Dbxref=GenBank:WP_223964212.1;Name=WP_223964212.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331412.1;locus_tag=LDO45_RS24740;product=LysR family transcriptional regulator;protein_id=WP_223964212.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq pseudogene 12951 13220 . + . ID=gene-LDO45_RS24745;Name=LDO45_RS24745;end_range=13220,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS24745;old_locus_tag=BDI4_580023;partial=true;pseudo=true NZ_CAJZAS010000214.1 Protein Homology CDS 12951 13220 . + 0 ID=cds-LDO45_RS24745;Parent=gene-LDO45_RS24745;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=13220,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611481.1;locus_tag=LDO45_RS24745;partial=true;product=transposase;pseudo=true;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 13598 14026 . - . ID=gene-LDO45_RS24750;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=LDO45_RS24750;old_locus_tag=BDI4_580025 NZ_CAJZAS010000214.1 Protein Homology CDS 13598 14026 . - 0 ID=cds-WP_223964214.1;Parent=gene-LDO45_RS24750;Dbxref=GenBank:WP_223964214.1;Name=WP_223964214.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733892.1;locus_tag=LDO45_RS24750;product=type VI secretion system baseplate subunit TssE;protein_id=WP_223964214.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 14040 16754 . - . ID=gene-LDO45_RS24755;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=LDO45_RS24755;old_locus_tag=BDI4_580026 NZ_CAJZAS010000214.1 Protein Homology CDS 14040 16754 . - 0 ID=cds-WP_223964216.1;Parent=gene-LDO45_RS24755;Dbxref=GenBank:WP_223964216.1;Name=WP_223964216.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765965.1;locus_tag=LDO45_RS24755;product=type VI secretion system ATPase TssH;protein_id=WP_223964216.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 16894 17379 . - . ID=gene-LDO45_RS24760;Name=LDO45_RS24760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24760;old_locus_tag=BDI4_580027 NZ_CAJZAS010000214.1 Protein Homology CDS 16894 17379 . - 0 ID=cds-WP_040140390.1;Parent=gene-LDO45_RS24760;Dbxref=GenBank:WP_040140390.1;Name=WP_040140390.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007587801.1;locus_tag=LDO45_RS24760;product=Hcp family type VI secretion system effector;protein_id=WP_040140390.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 17478 19211 . - . ID=gene-LDO45_RS24765;Name=LDO45_RS24765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24765;old_locus_tag=BDI4_580028 NZ_CAJZAS010000214.1 Protein Homology CDS 17478 19211 . - 0 ID=cds-WP_223964219.1;Parent=gene-LDO45_RS24765;Dbxref=GenBank:WP_223964219.1;Name=WP_223964219.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018418274.1;locus_tag=LDO45_RS24765;product=OmpA family protein;protein_id=WP_223964219.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 19208 19939 . - . ID=gene-LDO45_RS24770;Name=LDO45_RS24770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24770;old_locus_tag=BDI4_580029 NZ_CAJZAS010000214.1 Protein Homology CDS 19208 19939 . - 0 ID=cds-WP_223964221.1;Parent=gene-LDO45_RS24770;Dbxref=GenBank:WP_223964221.1;Name=WP_223964221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733888.1;locus_tag=LDO45_RS24770;product=DotU family type IV/VI secretion system protein;protein_id=WP_223964221.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 19936 21288 . - . ID=gene-LDO45_RS24775;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=LDO45_RS24775;old_locus_tag=BDI4_580030 NZ_CAJZAS010000214.1 Protein Homology CDS 19936 21288 . - 0 ID=cds-WP_223964229.1;Parent=gene-LDO45_RS24775;Dbxref=GenBank:WP_223964229.1;Name=WP_223964229.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765961.1;locus_tag=LDO45_RS24775;product=type VI secretion system baseplate subunit TssK;protein_id=WP_223964229.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 21884 22396 . + . ID=gene-LDO45_RS24780;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=LDO45_RS24780;old_locus_tag=BDI4_580033 NZ_CAJZAS010000214.1 Protein Homology CDS 21884 22396 . + 0 ID=cds-WP_223964236.1;Parent=gene-LDO45_RS24780;Dbxref=GenBank:WP_223964236.1;Name=WP_223964236.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018434326.1;locus_tag=LDO45_RS24780;product=type VI secretion system contractile sheath small subunit;protein_id=WP_223964236.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 22470 24002 . + . ID=gene-LDO45_RS24785;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=LDO45_RS24785;old_locus_tag=BDI4_580034 NZ_CAJZAS010000214.1 Protein Homology CDS 22470 24002 . + 0 ID=cds-WP_223964239.1;Parent=gene-LDO45_RS24785;Dbxref=GenBank:WP_223964239.1;Name=WP_223964239.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733082.1;locus_tag=LDO45_RS24785;product=type VI secretion system contractile sheath large subunit;protein_id=WP_223964239.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 24089 26440 . + . ID=gene-LDO45_RS24790;Name=LDO45_RS24790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24790;old_locus_tag=BDI4_580035 NZ_CAJZAS010000214.1 Protein Homology CDS 24089 26440 . + 0 ID=cds-WP_223964240.1;Parent=gene-LDO45_RS24790;Dbxref=GenBank:WP_223964240.1;Name=WP_223964240.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733083.1;locus_tag=LDO45_RS24790;product=type VI secretion system Vgr family protein;protein_id=WP_223964240.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 26451 27386 . + . ID=gene-LDO45_RS24795;Name=LDO45_RS24795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24795;old_locus_tag=BDI4_580036 NZ_CAJZAS010000214.1 Protein Homology CDS 26451 27386 . + 0 ID=cds-WP_223964242.1;Parent=gene-LDO45_RS24795;Dbxref=GenBank:WP_223964242.1;Name=WP_223964242.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024894.5;locus_tag=LDO45_RS24795;product=DUF4123 domain-containing protein;protein_id=WP_223964242.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 27405 27950 . + . ID=gene-LDO45_RS24800;Name=LDO45_RS24800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24800;old_locus_tag=BDI4_580037 NZ_CAJZAS010000214.1 Protein Homology CDS 27405 27950 . + 0 ID=cds-WP_223964244.1;Parent=gene-LDO45_RS24800;Dbxref=GenBank:WP_223964244.1;Name=WP_223964244.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365228.1;locus_tag=LDO45_RS24800;product=DUF3304 domain-containing protein;protein_id=WP_223964244.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 27963 30047 . + . ID=gene-LDO45_RS24805;Name=LDO45_RS24805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24805;old_locus_tag=BDI4_580038 NZ_CAJZAS010000214.1 Protein Homology CDS 27963 30047 . + 0 ID=cds-WP_223964246.1;Parent=gene-LDO45_RS24805;Dbxref=GenBank:WP_223964246.1;Name=WP_223964246.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365226.1;locus_tag=LDO45_RS24805;product=DUF2235 domain-containing protein;protein_id=WP_223964246.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 30051 30299 . + . ID=gene-LDO45_RS24810;Name=LDO45_RS24810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24810;old_locus_tag=BDI4_580039 NZ_CAJZAS010000214.1 Protein Homology CDS 30051 30299 . + 0 ID=cds-WP_223964248.1;Parent=gene-LDO45_RS24810;Dbxref=GenBank:WP_223964248.1;Name=WP_223964248.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750262.1;locus_tag=LDO45_RS24810;product=PAAR domain-containing protein;protein_id=WP_223964248.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 30382 31551 . + . ID=gene-LDO45_RS24815;Name=LDO45_RS24815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24815;old_locus_tag=BDI4_580040 NZ_CAJZAS010000214.1 Protein Homology CDS 30382 31551 . + 0 ID=cds-WP_223964250.1;Parent=gene-LDO45_RS24815;Dbxref=GenBank:WP_223964250.1;Name=WP_223964250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750261.1;locus_tag=LDO45_RS24815;product=hypothetical protein;protein_id=WP_223964250.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 31548 35078 . + . ID=gene-LDO45_RS24820;Name=LDO45_RS24820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24820;old_locus_tag=BDI4_580041 NZ_CAJZAS010000214.1 Protein Homology CDS 31548 35078 . + 0 ID=cds-WP_223964252.1;Parent=gene-LDO45_RS24820;Dbxref=GenBank:WP_223964252.1;Name=WP_223964252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012733879.1;locus_tag=LDO45_RS24820;product=ImcF-related family protein;protein_id=WP_223964252.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 35075 36658 . + . ID=gene-LDO45_RS24825;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=LDO45_RS24825;old_locus_tag=BDI4_580042 NZ_CAJZAS010000214.1 Protein Homology CDS 35075 36658 . + 0 ID=cds-WP_223964260.1;Parent=gene-LDO45_RS24825;Dbxref=GenBank:WP_223964260.1;Name=WP_223964260.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424034.1;locus_tag=LDO45_RS24825;product=type VI secretion system protein TssA;protein_id=WP_223964260.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 36671 38485 . + . ID=gene-LDO45_RS24830;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LDO45_RS24830;old_locus_tag=BDI4_580043 NZ_CAJZAS010000214.1 Protein Homology CDS 36671 38485 . + 0 ID=cds-WP_223964262.1;Parent=gene-LDO45_RS24830;Dbxref=GenBank:WP_223964262.1;Name=WP_223964262.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750258.1;locus_tag=LDO45_RS24830;product=type VI secretion system baseplate subunit TssF;protein_id=WP_223964262.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 38449 39573 . + . ID=gene-LDO45_RS24835;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=LDO45_RS24835;old_locus_tag=BDI4_580044 NZ_CAJZAS010000214.1 Protein Homology CDS 38449 39573 . + 0 ID=cds-WP_223964264.1;Parent=gene-LDO45_RS24835;Dbxref=GenBank:WP_223964264.1;Name=WP_223964264.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756602.1;locus_tag=LDO45_RS24835;product=type VI secretion system baseplate subunit TssG;protein_id=WP_223964264.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 39901 40431 . + . ID=gene-LDO45_RS24840;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=LDO45_RS24840;old_locus_tag=BDI4_580045 NZ_CAJZAS010000214.1 Protein Homology CDS 39901 40431 . + 0 ID=cds-WP_223964266.1;Parent=gene-LDO45_RS24840;Dbxref=GenBank:WP_223964266.1;Name=WP_223964266.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726083.1;locus_tag=LDO45_RS24840;product=type VI secretion system lipoprotein TssJ;protein_id=WP_223964266.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq pseudogene 40655 40914 . + . ID=gene-LDO45_RS24845;Name=LDO45_RS24845;end_range=40914,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS24845;partial=true;pseudo=true;start_range=.,40655 NZ_CAJZAS010000214.1 Protein Homology CDS 40655 40914 . + 0 ID=cds-LDO45_RS24845;Parent=gene-LDO45_RS24845;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;end_range=40914,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006492556.1;locus_tag=LDO45_RS24845;partial=true;product=transposase;pseudo=true;start_range=.,40655;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 41279 41803 . + . ID=gene-LDO45_RS24850;Name=LDO45_RS24850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24850 NZ_CAJZAS010000214.1 GeneMarkS-2+ CDS 41279 41803 . + 0 ID=cds-WP_223964268.1;Parent=gene-LDO45_RS24850;Dbxref=GenBank:WP_223964268.1;Name=WP_223964268.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS24850;product=hypothetical protein;protein_id=WP_223964268.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 42125 42481 . + . ID=gene-LDO45_RS24855;Name=LDO45_RS24855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24855;old_locus_tag=BDI4_580049 NZ_CAJZAS010000214.1 GeneMarkS-2+ CDS 42125 42481 . + 0 ID=cds-WP_223964270.1;Parent=gene-LDO45_RS24855;Dbxref=GenBank:WP_223964270.1;Name=WP_223964270.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS24855;product=hypothetical protein;protein_id=WP_223964270.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq pseudogene 42913 43307 . - . ID=gene-LDO45_RS24860;Name=LDO45_RS24860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS24860;partial=true;pseudo=true;start_range=.,42913 NZ_CAJZAS010000214.1 Protein Homology CDS 42913 43307 . - 0 ID=cds-LDO45_RS24860;Parent=gene-LDO45_RS24860;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611481.1;locus_tag=LDO45_RS24860;partial=true;product=transposase;pseudo=true;start_range=.,42913;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 43546 43941 . + . ID=gene-LDO45_RS24865;Name=LDO45_RS24865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24865 NZ_CAJZAS010000214.1 GeneMarkS-2+ CDS 43546 43941 . + 0 ID=cds-WP_223964272.1;Parent=gene-LDO45_RS24865;Dbxref=GenBank:WP_223964272.1;Name=WP_223964272.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS24865;product=hypothetical protein;protein_id=WP_223964272.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 44542 44991 . + . ID=gene-LDO45_RS24870;Name=LDO45_RS24870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24870;old_locus_tag=BDI4_580054 NZ_CAJZAS010000214.1 GeneMarkS-2+ CDS 44542 44991 . + 0 ID=cds-WP_223964291.1;Parent=gene-LDO45_RS24870;Dbxref=GenBank:WP_223964291.1;Name=WP_223964291.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS24870;product=hypothetical protein;protein_id=WP_223964291.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq pseudogene 45081 45386 . - . ID=gene-LDO45_RS24875;Name=LDO45_RS24875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS24875;old_locus_tag=BDI4_580055;partial=true;pseudo=true;start_range=.,45081 NZ_CAJZAS010000214.1 Protein Homology CDS 45081 45386 . - 0 ID=cds-LDO45_RS24875;Parent=gene-LDO45_RS24875;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006313,GO:0003677,GO:0004803;gbkey=CDS;go_function=DNA binding|0003677||IEA,transposase activity|0004803||IEA;go_process=DNA transposition|0006313||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611488.1;locus_tag=LDO45_RS24875;partial=true;product=transposase;pseudo=true;start_range=.,45081;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 45587 46033 . - . ID=gene-LDO45_RS24880;Name=LDO45_RS24880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24880;old_locus_tag=BDI4_580056 NZ_CAJZAS010000214.1 GeneMarkS-2+ CDS 45587 46033 . - 0 ID=cds-WP_223964274.1;Parent=gene-LDO45_RS24880;Dbxref=GenBank:WP_223964274.1;Name=WP_223964274.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS24880;product=hypothetical protein;protein_id=WP_223964274.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 46085 46384 . - . ID=gene-LDO45_RS24885;Name=LDO45_RS24885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24885;old_locus_tag=BDI4_580057 NZ_CAJZAS010000214.1 Protein Homology CDS 46085 46384 . - 0 ID=cds-WP_308051271.1;Parent=gene-LDO45_RS24885;Dbxref=GenBank:WP_308051271.1;Name=WP_308051271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409555.1;locus_tag=LDO45_RS24885;product=H-NS histone family protein;protein_id=WP_308051271.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 46783 47598 . - . ID=gene-LDO45_RS24890;Name=LDO45_RS24890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24890;old_locus_tag=BDI4_580058 NZ_CAJZAS010000214.1 Protein Homology CDS 46783 47598 . - 0 ID=cds-WP_223964276.1;Parent=gene-LDO45_RS24890;Dbxref=GenBank:WP_223964276.1;Name=WP_223964276.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012772.5;locus_tag=LDO45_RS24890;product=EAL domain-containing protein;protein_id=WP_223964276.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 48902 50623 . + . ID=gene-LDO45_RS24895;Name=LDO45_RS24895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24895;old_locus_tag=BDI4_580061 NZ_CAJZAS010000214.1 Protein Homology CDS 48902 50623 . + 0 ID=cds-WP_223964278.1;Parent=gene-LDO45_RS24895;Dbxref=GenBank:WP_223964278.1;Name=WP_223964278.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024816.5;locus_tag=LDO45_RS24895;product=tetratricopeptide repeat protein;protein_id=WP_223964278.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 50843 51493 . - . ID=gene-LDO45_RS24900;Name=LDO45_RS24900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24900;old_locus_tag=BDI4_580062 NZ_CAJZAS010000214.1 Protein Homology CDS 50843 51493 . - 0 ID=cds-WP_223964280.1;Parent=gene-LDO45_RS24900;Dbxref=GenBank:WP_223964280.1;Name=WP_223964280.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010102904.1;locus_tag=LDO45_RS24900;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_223964280.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 52463 52798 . + . ID=gene-LDO45_RS24905;Name=LDO45_RS24905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24905;old_locus_tag=BDI4_580064 NZ_CAJZAS010000214.1 GeneMarkS-2+ CDS 52463 52798 . + 0 ID=cds-WP_223964282.1;Parent=gene-LDO45_RS24905;Dbxref=GenBank:WP_223964282.1;Name=WP_223964282.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS24905;product=hypothetical protein;protein_id=WP_223964282.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq pseudogene 52813 53070 . - . ID=gene-LDO45_RS24910;Name=LDO45_RS24910;end_range=53070,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS24910;partial=true;pseudo=true NZ_CAJZAS010000214.1 Protein Homology CDS 52813 53070 . - 0 ID=cds-LDO45_RS24910;Parent=gene-LDO45_RS24910;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=53070,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019055.5;locus_tag=LDO45_RS24910;partial=true;product=phage GP46 family protein;pseudo=true;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 53329 53718 . + . ID=gene-LDO45_RS24915;Name=LDO45_RS24915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24915;old_locus_tag=BDI4_580067 NZ_CAJZAS010000214.1 Protein Homology CDS 53329 53718 . + 0 ID=cds-WP_223964284.1;Parent=gene-LDO45_RS24915;Dbxref=GenBank:WP_223964284.1;Name=WP_223964284.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR01731.1;locus_tag=LDO45_RS24915;product=hypothetical protein;protein_id=WP_223964284.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 53853 55082 . - . ID=gene-LDO45_RS24920;Name=LDO45_RS24920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24920;old_locus_tag=BDI4_580068 NZ_CAJZAS010000214.1 Protein Homology CDS 53853 55082 . - 0 ID=cds-WP_223964286.1;Parent=gene-LDO45_RS24920;Dbxref=GenBank:WP_223964286.1;Name=WP_223964286.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017853.5;locus_tag=LDO45_RS24920;product=OmpA family protein;protein_id=WP_223964286.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 56417 56542 . - . ID=gene-LDO45_RS34300;Name=LDO45_RS34300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34300;old_locus_tag=BDI4_580071 NZ_CAJZAS010000214.1 GeneMarkS-2+ CDS 56417 56542 . - 0 ID=cds-WP_290371033.1;Parent=gene-LDO45_RS34300;Dbxref=GenBank:WP_290371033.1;Name=WP_290371033.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34300;product=hypothetical protein;protein_id=WP_290371033.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq pseudogene 57601 57774 . + . ID=gene-LDO45_RS24925;Name=LDO45_RS24925;end_range=57774,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS24925;old_locus_tag=BDI4_580072;partial=true;pseudo=true;start_range=.,57601 NZ_CAJZAS010000214.1 Protein Homology CDS 57601 57774 . + 0 ID=cds-LDO45_RS24925;Parent=gene-LDO45_RS24925;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0097367;end_range=57774,.;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017843764.1;locus_tag=LDO45_RS24925;partial=true;product=LysM domain-containing protein;pseudo=true;start_range=.,57601;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 58026 58247 . - . ID=gene-LDO45_RS24930;Name=LDO45_RS24930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24930;old_locus_tag=BDI4_580073 NZ_CAJZAS010000214.1 Protein Homology CDS 58026 58247 . - 0 ID=cds-WP_059803960.1;Parent=gene-LDO45_RS24930;Dbxref=GenBank:WP_059803960.1;Name=WP_059803960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016726799.1;locus_tag=LDO45_RS24930;product=hypothetical protein;protein_id=WP_059803960.1;transl_table=11 NZ_CAJZAS010000214.1 RefSeq gene 59159 60228 . + . ID=gene-LDO45_RS24935;Name=LDO45_RS24935;end_range=60228,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24935;partial=true NZ_CAJZAS010000214.1 Protein Homology CDS 59159 60228 . + 0 ID=cds-WP_290371034.1;Parent=gene-LDO45_RS24935;Dbxref=GenBank:WP_290371034.1;Name=WP_290371034.1;end_range=60228,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024418.5;locus_tag=LDO45_RS24935;partial=true;product=ESPR-type extended signal peptide-containing protein;protein_id=WP_290371034.1;transl_table=11 ##sequence-region NZ_CAJZAS010000215.1 1 80681 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000215.1 RefSeq region 1 80681 . + . ID=NZ_CAJZAS010000215.1:1..80681;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_59 NZ_CAJZAS010000215.1 RefSeq gene 89 1210 . - . ID=gene-LDO45_RS24940;Name=LDO45_RS24940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24940;old_locus_tag=BDI4_590001 NZ_CAJZAS010000215.1 Protein Homology CDS 89 1210 . - 0 ID=cds-WP_223964294.1;Parent=gene-LDO45_RS24940;Dbxref=GenBank:WP_223964294.1;Name=WP_223964294.1;Ontology_term=GO:0015846,GO:0019808,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350369.1;locus_tag=LDO45_RS24940;product=polyamine ABC transporter substrate-binding protein;protein_id=WP_223964294.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 1451 2284 . + . ID=gene-LDO45_RS24945;Name=LDO45_RS24945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24945;old_locus_tag=BDI4_590002 NZ_CAJZAS010000215.1 Protein Homology CDS 1451 2284 . + 0 ID=cds-WP_059530627.1;Parent=gene-LDO45_RS24945;Dbxref=GenBank:WP_059530627.1;Name=WP_059530627.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660942.1;locus_tag=LDO45_RS24945;product=helix-turn-helix transcriptional regulator;protein_id=WP_059530627.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 2588 2827 . - . ID=gene-LDO45_RS24950;Name=LDO45_RS24950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24950;old_locus_tag=BDI4_590004 NZ_CAJZAS010000215.1 GeneMarkS-2+ CDS 2588 2827 . - 0 ID=cds-WP_223964296.1;Parent=gene-LDO45_RS24950;Dbxref=GenBank:WP_223964296.1;Name=WP_223964296.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS24950;product=hypothetical protein;protein_id=WP_223964296.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 3017 5596 . - . ID=gene-LDO45_RS24955;Name=LDO45_RS24955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24955;old_locus_tag=BDI4_590005 NZ_CAJZAS010000215.1 Protein Homology CDS 3017 5596 . - 0 ID=cds-WP_223964298.1;Parent=gene-LDO45_RS24955;Dbxref=GenBank:WP_223964298.1;Name=WP_223964298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363911.1;locus_tag=LDO45_RS24955;product=EAL domain-containing protein;protein_id=WP_223964298.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 5661 9362 . - . ID=gene-LDO45_RS24960;Name=LDO45_RS24960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24960;old_locus_tag=BDI4_590006 NZ_CAJZAS010000215.1 Protein Homology CDS 5661 9362 . - 0 ID=cds-WP_223964300.1;Parent=gene-LDO45_RS24960;Dbxref=GenBank:WP_223964300.1;Name=WP_223964300.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363910.1;locus_tag=LDO45_RS24960;product=hybrid sensor histidine kinase/response regulator;protein_id=WP_223964300.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 9408 10544 . - . ID=gene-LDO45_RS24965;Name=LDO45_RS24965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24965;old_locus_tag=BDI4_590007 NZ_CAJZAS010000215.1 Protein Homology CDS 9408 10544 . - 0 ID=cds-WP_063892207.1;Parent=gene-LDO45_RS24965;Dbxref=GenBank:WP_063892207.1;Name=WP_063892207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757919.1;locus_tag=LDO45_RS24965;product=ABC transporter substrate-binding protein;protein_id=WP_063892207.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq pseudogene 10847 11491 . + . ID=gene-LDO45_RS24970;Name=LDO45_RS24970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS24970;old_locus_tag=BDI4_590010;partial=true;pseudo=true;start_range=.,10847 NZ_CAJZAS010000215.1 Protein Homology CDS 10847 11491 . + 0 ID=cds-LDO45_RS24970;Parent=gene-LDO45_RS24970;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004206816.1;locus_tag=LDO45_RS24970;partial=true;product=porin;pseudo=true;start_range=.,10847;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 11565 12047 . - . ID=gene-LDO45_RS24975;Name=LDO45_RS24975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24975;old_locus_tag=BDI4_590011 NZ_CAJZAS010000215.1 Protein Homology CDS 11565 12047 . - 0 ID=cds-WP_059691045.1;Parent=gene-LDO45_RS24975;Dbxref=GenBank:WP_059691045.1;Name=WP_059691045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372188.1;locus_tag=LDO45_RS24975;product=hypothetical protein;protein_id=WP_059691045.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 12202 12669 . - . ID=gene-LDO45_RS24980;Name=LDO45_RS24980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24980;old_locus_tag=BDI4_590012 NZ_CAJZAS010000215.1 Protein Homology CDS 12202 12669 . - 0 ID=cds-WP_223964302.1;Parent=gene-LDO45_RS24980;Dbxref=GenBank:WP_223964302.1;Name=WP_223964302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749735.1;locus_tag=LDO45_RS24980;product=sodium:proline symporter;protein_id=WP_223964302.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 12704 13363 . - . ID=gene-LDO45_RS24985;Name=LDO45_RS24985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24985;old_locus_tag=BDI4_590013 NZ_CAJZAS010000215.1 Protein Homology CDS 12704 13363 . - 0 ID=cds-WP_059530720.1;Parent=gene-LDO45_RS24985;Dbxref=GenBank:WP_059530720.1;Name=WP_059530720.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749736.1;locus_tag=LDO45_RS24985;product=hypothetical protein;protein_id=WP_059530720.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 13531 14487 . - . ID=gene-LDO45_RS24990;Name=LDO45_RS24990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24990;old_locus_tag=BDI4_590014 NZ_CAJZAS010000215.1 Protein Homology CDS 13531 14487 . - 0 ID=cds-WP_223964304.1;Parent=gene-LDO45_RS24990;Dbxref=GenBank:WP_223964304.1;Name=WP_223964304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481033.1;locus_tag=LDO45_RS24990;product=LysR substrate-binding domain-containing protein;protein_id=WP_223964304.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 14545 15447 . + . ID=gene-LDO45_RS24995;Name=LDO45_RS24995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS24995;old_locus_tag=BDI4_590015 NZ_CAJZAS010000215.1 Protein Homology CDS 14545 15447 . + 0 ID=cds-WP_223964306.1;Parent=gene-LDO45_RS24995;Dbxref=GenBank:WP_223964306.1;Name=WP_223964306.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549321.1;locus_tag=LDO45_RS24995;product=DMT family transporter;protein_id=WP_223964306.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 16006 17160 . + . ID=gene-LDO45_RS25000;Name=LDO45_RS25000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25000;old_locus_tag=BDI4_590016 NZ_CAJZAS010000215.1 Protein Homology CDS 16006 17160 . + 0 ID=cds-WP_223964308.1;Parent=gene-LDO45_RS25000;Dbxref=GenBank:WP_223964308.1;Name=WP_223964308.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726283.1;locus_tag=LDO45_RS25000;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_223964308.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 17249 17551 . + . ID=gene-LDO45_RS25005;Name=LDO45_RS25005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25005;old_locus_tag=BDI4_590019 NZ_CAJZAS010000215.1 Protein Homology CDS 17249 17551 . + 0 ID=cds-WP_059820767.1;Parent=gene-LDO45_RS25005;Dbxref=GenBank:WP_059820767.1;Name=WP_059820767.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549323.1;locus_tag=LDO45_RS25005;product=hypothetical protein;protein_id=WP_059820767.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 17634 20693 . - . ID=gene-LDO45_RS25010;Name=LDO45_RS25010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25010;old_locus_tag=BDI4_590020 NZ_CAJZAS010000215.1 Protein Homology CDS 17634 20693 . - 0 ID=cds-WP_223964310.1;Parent=gene-LDO45_RS25010;Dbxref=GenBank:WP_223964310.1;Name=WP_223964310.1;Ontology_term=GO:0046872,GO:0050660,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,flavin adenine dinucleotide binding|0050660||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490961.1;locus_tag=LDO45_RS25010;product=FAD-binding and (Fe-S)-binding domain-containing protein;protein_id=WP_223964310.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 20846 21739 . + . ID=gene-LDO45_RS25015;Name=LDO45_RS25015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25015;old_locus_tag=BDI4_590021 NZ_CAJZAS010000215.1 Protein Homology CDS 20846 21739 . + 0 ID=cds-WP_059530738.1;Parent=gene-LDO45_RS25015;Dbxref=GenBank:WP_059530738.1;Name=WP_059530738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372166.1;locus_tag=LDO45_RS25015;product=LysR substrate-binding domain-containing protein;protein_id=WP_059530738.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 21764 22615 . - . ID=gene-LDO45_RS25020;Name=LDO45_RS25020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25020;old_locus_tag=BDI4_590022 NZ_CAJZAS010000215.1 Protein Homology CDS 21764 22615 . - 0 ID=cds-WP_059691006.1;Parent=gene-LDO45_RS25020;Dbxref=GenBank:WP_059691006.1;Name=WP_059691006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490930.1;locus_tag=LDO45_RS25020;product=LysR substrate-binding domain-containing protein;protein_id=WP_059691006.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 22722 23369 . + . ID=gene-LDO45_RS25025;Name=LDO45_RS25025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25025;old_locus_tag=BDI4_590023 NZ_CAJZAS010000215.1 Protein Homology CDS 22722 23369 . + 0 ID=cds-WP_223964312.1;Parent=gene-LDO45_RS25025;Dbxref=GenBank:WP_223964312.1;Name=WP_223964312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490923.1;locus_tag=LDO45_RS25025;product=LysE family translocator;protein_id=WP_223964312.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 23467 24570 . - . ID=gene-LDO45_RS25030;Name=sfnG;gbkey=Gene;gene=sfnG;gene_biotype=protein_coding;locus_tag=LDO45_RS25030;old_locus_tag=BDI4_590024 NZ_CAJZAS010000215.1 Protein Homology CDS 23467 24570 . - 0 ID=cds-WP_223964321.1;Parent=gene-LDO45_RS25030;Dbxref=GenBank:WP_223964321.1;Name=WP_223964321.1;Ontology_term=GO:0006790,GO:0004497,GO:0010181;gbkey=CDS;gene=sfnG;go_function=monooxygenase activity|0004497||IEA,FMN binding|0010181||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399272.1;locus_tag=LDO45_RS25030;product=dimethylsulfone monooxygenase SfnG;protein_id=WP_223964321.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 24567 24896 . - . ID=gene-LDO45_RS25035;Name=LDO45_RS25035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25035 NZ_CAJZAS010000215.1 GeneMarkS-2+ CDS 24567 24896 . - 0 ID=cds-WP_223964323.1;Parent=gene-LDO45_RS25035;Dbxref=GenBank:WP_223964323.1;Name=WP_223964323.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS25035;product=hypothetical protein;protein_id=WP_223964323.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 25107 26231 . + . ID=gene-LDO45_RS25040;Name=LDO45_RS25040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25040;old_locus_tag=BDI4_590026 NZ_CAJZAS010000215.1 Protein Homology CDS 25107 26231 . + 0 ID=cds-WP_223964325.1;Parent=gene-LDO45_RS25040;Dbxref=GenBank:WP_223964325.1;Name=WP_223964325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490922.1;locus_tag=LDO45_RS25040;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_223964325.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 26397 27593 . - . ID=gene-LDO45_RS25045;Name=LDO45_RS25045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25045;old_locus_tag=BDI4_590028 NZ_CAJZAS010000215.1 Protein Homology CDS 26397 27593 . - 0 ID=cds-WP_223964327.1;Parent=gene-LDO45_RS25045;Dbxref=GenBank:WP_223964327.1;Name=WP_223964327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400310.1;locus_tag=LDO45_RS25045;product=collagen-like triple helix repeat-containing protein;protein_id=WP_223964327.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 27935 29644 . + . ID=gene-LDO45_RS25050;Name=LDO45_RS25050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25050;old_locus_tag=BDI4_590029 NZ_CAJZAS010000215.1 Protein Homology CDS 27935 29644 . + 0 ID=cds-WP_223964329.1;Parent=gene-LDO45_RS25050;Dbxref=GenBank:WP_223964329.1;Name=WP_223964329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493661.1;locus_tag=LDO45_RS25050;product=dihydroxyacetone kinase family protein;protein_id=WP_223964329.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 29774 31162 . + . ID=gene-LDO45_RS25055;Name=LDO45_RS25055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25055;old_locus_tag=BDI4_590030 NZ_CAJZAS010000215.1 Protein Homology CDS 29774 31162 . + 0 ID=cds-WP_059691000.1;Parent=gene-LDO45_RS25055;Dbxref=GenBank:WP_059691000.1;Name=WP_059691000.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337129.1;locus_tag=LDO45_RS25055;product=MFS transporter;protein_id=WP_059691000.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 31459 32391 . + . ID=gene-LDO45_RS25060;Name=LDO45_RS25060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25060;old_locus_tag=BDI4_590032 NZ_CAJZAS010000215.1 Protein Homology CDS 31459 32391 . + 0 ID=cds-WP_223964331.1;Parent=gene-LDO45_RS25060;Dbxref=GenBank:WP_223964331.1;Name=WP_223964331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497864.1;locus_tag=LDO45_RS25060;product=MBL fold metallo-hydrolase;protein_id=WP_223964331.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 32593 33987 . - . ID=gene-LDO45_RS25065;Name=LDO45_RS25065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25065;old_locus_tag=BDI4_590033 NZ_CAJZAS010000215.1 Protein Homology CDS 32593 33987 . - 0 ID=cds-WP_223964333.1;Parent=gene-LDO45_RS25065;Dbxref=GenBank:WP_223964333.1;Name=WP_223964333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337133.1;locus_tag=LDO45_RS25065;product=aspartate aminotransferase family protein;protein_id=WP_223964333.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 34008 35486 . - . ID=gene-LDO45_RS25070;Name=LDO45_RS25070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25070;old_locus_tag=BDI4_590034 NZ_CAJZAS010000215.1 Protein Homology CDS 34008 35486 . - 0 ID=cds-WP_223964335.1;Parent=gene-LDO45_RS25070;Dbxref=GenBank:WP_223964335.1;Name=WP_223964335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372139.1;locus_tag=LDO45_RS25070;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_223964335.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 35610 36080 . - . ID=gene-LDO45_RS25075;Name=LDO45_RS25075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25075;old_locus_tag=BDI4_590035 NZ_CAJZAS010000215.1 Protein Homology CDS 35610 36080 . - 0 ID=cds-WP_223964337.1;Parent=gene-LDO45_RS25075;Dbxref=GenBank:WP_223964337.1;Name=WP_223964337.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372138.1;locus_tag=LDO45_RS25075;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_223964337.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 36094 37131 . - . ID=gene-LDO45_RS25080;Name=doeB;gbkey=Gene;gene=doeB;gene_biotype=protein_coding;locus_tag=LDO45_RS25080;old_locus_tag=BDI4_590036 NZ_CAJZAS010000215.1 Protein Homology CDS 36094 37131 . - 0 ID=cds-WP_059690996.1;Parent=gene-LDO45_RS25080;Dbxref=GenBank:WP_059690996.1;Name=WP_059690996.1;Ontology_term=GO:0042400;gbkey=CDS;gene=doeB;go_process=ectoine catabolic process|0042400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405502.1;locus_tag=LDO45_RS25080;product=N(2)-acetyl-L-2%2C4-diaminobutanoate deacetylase DoeB;protein_id=WP_059690996.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 37136 38344 . - . ID=gene-LDO45_RS25085;Name=doeA;gbkey=Gene;gene=doeA;gene_biotype=protein_coding;locus_tag=LDO45_RS25085;old_locus_tag=BDI4_590037 NZ_CAJZAS010000215.1 Protein Homology CDS 37136 38344 . - 0 ID=cds-WP_223964339.1;Parent=gene-LDO45_RS25085;Dbxref=GenBank:WP_223964339.1;Name=WP_223964339.1;Note=DoeA (degradation of ectoine A) is also called EutD (ectoine utilization D).;Ontology_term=GO:0042400;gbkey=CDS;gene=doeA;go_process=ectoine catabolic process|0042400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337137.1;locus_tag=LDO45_RS25085;product=ectoine hydrolase DoeA;protein_id=WP_223964339.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 38355 39359 . - . ID=gene-LDO45_RS25090;Name=LDO45_RS25090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25090;old_locus_tag=BDI4_590038 NZ_CAJZAS010000215.1 Protein Homology CDS 38355 39359 . - 0 ID=cds-WP_223964341.1;Parent=gene-LDO45_RS25090;Dbxref=GenBank:WP_223964341.1;Name=WP_223964341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416307.1;locus_tag=LDO45_RS25090;product=cyclodeaminase;protein_id=WP_223964341.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 39361 40332 . - . ID=gene-LDO45_RS25095;Name=eutB;gbkey=Gene;gene=eutB;gene_biotype=protein_coding;locus_tag=LDO45_RS25095;old_locus_tag=BDI4_590039 NZ_CAJZAS010000215.1 Protein Homology CDS 39361 40332 . - 0 ID=cds-WP_223964343.1;Parent=gene-LDO45_RS25095;Dbxref=GenBank:WP_223964343.1;Name=WP_223964343.1;gbkey=CDS;gene=eutB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372136.1;locus_tag=LDO45_RS25095;product=hydroxyectoine utilization dehydratase EutB;protein_id=WP_223964343.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 40441 41853 . - . ID=gene-LDO45_RS25100;Name=LDO45_RS25100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25100;old_locus_tag=BDI4_590040 NZ_CAJZAS010000215.1 Protein Homology CDS 40441 41853 . - 0 ID=cds-WP_223964345.1;Parent=gene-LDO45_RS25100;Dbxref=GenBank:WP_223964345.1;Name=WP_223964345.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011879624.1;locus_tag=LDO45_RS25100;product=PLP-dependent aminotransferase family protein;protein_id=WP_223964345.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 42256 42735 . + . ID=gene-LDO45_RS25105;Name=LDO45_RS25105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25105;old_locus_tag=BDI4_590042 NZ_CAJZAS010000215.1 Protein Homology CDS 42256 42735 . + 0 ID=cds-WP_223964347.1;Parent=gene-LDO45_RS25105;Dbxref=GenBank:WP_223964347.1;Name=WP_223964347.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481010.1;locus_tag=LDO45_RS25105;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_223964347.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 42732 44882 . + . ID=gene-LDO45_RS25110;Name=LDO45_RS25110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25110;old_locus_tag=BDI4_590043 NZ_CAJZAS010000215.1 Protein Homology CDS 42732 44882 . + 0 ID=cds-WP_223964349.1;Parent=gene-LDO45_RS25110;Dbxref=GenBank:WP_223964349.1;Name=WP_223964349.1;Ontology_term=GO:0006810,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399334.1;locus_tag=LDO45_RS25110;product=FUSC family protein;protein_id=WP_223964349.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 44917 45129 . + . ID=gene-LDO45_RS25115;Name=LDO45_RS25115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25115;old_locus_tag=BDI4_590044 NZ_CAJZAS010000215.1 Protein Homology CDS 44917 45129 . + 0 ID=cds-WP_044849171.1;Parent=gene-LDO45_RS25115;Dbxref=GenBank:WP_044849171.1;Name=WP_044849171.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481008.1;locus_tag=LDO45_RS25115;product=DUF1656 domain-containing protein;protein_id=WP_044849171.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 45132 46085 . + . ID=gene-LDO45_RS25120;Name=LDO45_RS25120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25120;old_locus_tag=BDI4_590046 NZ_CAJZAS010000215.1 Protein Homology CDS 45132 46085 . + 0 ID=cds-WP_223964350.1;Parent=gene-LDO45_RS25120;Dbxref=GenBank:WP_223964350.1;Name=WP_223964350.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337147.1;locus_tag=LDO45_RS25120;product=HlyD family secretion protein;protein_id=WP_223964350.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 46082 47581 . + . ID=gene-LDO45_RS25125;Name=LDO45_RS25125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25125;old_locus_tag=BDI4_590045 NZ_CAJZAS010000215.1 Protein Homology CDS 46082 47581 . + 0 ID=cds-WP_223964358.1;Parent=gene-LDO45_RS25125;Dbxref=GenBank:WP_223964358.1;Name=WP_223964358.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660896.1;locus_tag=LDO45_RS25125;product=efflux transporter outer membrane subunit;protein_id=WP_223964358.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 47758 48183 . + . ID=gene-LDO45_RS25130;Name=LDO45_RS25130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25130;old_locus_tag=BDI4_590047 NZ_CAJZAS010000215.1 Protein Homology CDS 47758 48183 . + 0 ID=cds-WP_059690987.1;Parent=gene-LDO45_RS25130;Dbxref=GenBank:WP_059690987.1;Name=WP_059690987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337149.1;locus_tag=LDO45_RS25130;product=molybdopterin-binding protein;protein_id=WP_059690987.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 48200 48790 . + . ID=gene-LDO45_RS25135;Name=LDO45_RS25135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25135;old_locus_tag=BDI4_590048 NZ_CAJZAS010000215.1 Protein Homology CDS 48200 48790 . + 0 ID=cds-WP_223964360.1;Parent=gene-LDO45_RS25135;Dbxref=GenBank:WP_223964360.1;Name=WP_223964360.1;Ontology_term=GO:0009399,GO:0030151;gbkey=CDS;go_function=molybdenum ion binding|0030151||IEA;go_process=nitrogen fixation|0009399||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755492.1;locus_tag=LDO45_RS25135;product=nitrogen fixation protein NifQ;protein_id=WP_223964360.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 48910 49275 . + . ID=gene-LDO45_RS25140;Name=LDO45_RS25140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25140;old_locus_tag=BDI4_590049 NZ_CAJZAS010000215.1 Protein Homology CDS 48910 49275 . + 0 ID=cds-WP_223964362.1;Parent=gene-LDO45_RS25140;Dbxref=GenBank:WP_223964362.1;Name=WP_223964362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004201167.1;locus_tag=LDO45_RS25140;product=bleomycin resistance protein;protein_id=WP_223964362.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 49390 50451 . - . ID=gene-LDO45_RS25145;Name=LDO45_RS25145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25145;old_locus_tag=BDI4_590050 NZ_CAJZAS010000215.1 Protein Homology CDS 49390 50451 . - 0 ID=cds-WP_223964364.1;Parent=gene-LDO45_RS25145;Dbxref=GenBank:WP_223964364.1;Name=WP_223964364.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489069.1;locus_tag=LDO45_RS25145;product=DMT family transporter;protein_id=WP_223964364.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 51021 51677 . - . ID=gene-LDO45_RS25150;Name=LDO45_RS25150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25150;old_locus_tag=BDI4_590051 NZ_CAJZAS010000215.1 Protein Homology CDS 51021 51677 . - 0 ID=cds-WP_223964392.1;Parent=gene-LDO45_RS25150;Dbxref=GenBank:WP_223964392.1;Name=WP_223964392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489074.1;locus_tag=LDO45_RS25150;product=ProQ/FinO family protein;protein_id=WP_223964392.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 52354 52938 . + . ID=gene-LDO45_RS25155;Name=LDO45_RS25155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25155;old_locus_tag=BDI4_590052 NZ_CAJZAS010000215.1 Protein Homology CDS 52354 52938 . + 0 ID=cds-WP_223964366.1;Parent=gene-LDO45_RS25155;Dbxref=GenBank:WP_223964366.1;Name=WP_223964366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660891.1;locus_tag=LDO45_RS25155;product=DUF2889 domain-containing protein;protein_id=WP_223964366.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 53117 53608 . - . ID=gene-LDO45_RS25160;Name=LDO45_RS25160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25160;old_locus_tag=BDI4_590053 NZ_CAJZAS010000215.1 Protein Homology CDS 53117 53608 . - 0 ID=cds-WP_223964368.1;Parent=gene-LDO45_RS25160;Dbxref=GenBank:WP_223964368.1;Name=WP_223964368.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335397.1;locus_tag=LDO45_RS25160;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_223964368.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 53802 54455 . - . ID=gene-LDO45_RS25165;Name=LDO45_RS25165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25165;old_locus_tag=BDI4_590054 NZ_CAJZAS010000215.1 Protein Homology CDS 53802 54455 . - 0 ID=cds-WP_223964370.1;Parent=gene-LDO45_RS25165;Dbxref=GenBank:WP_223964370.1;Name=WP_223964370.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480999.1;locus_tag=LDO45_RS25165;product=TetR/AcrR family transcriptional regulator;protein_id=WP_223964370.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 54540 55667 . + . ID=gene-LDO45_RS25170;Name=LDO45_RS25170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25170;old_locus_tag=BDI4_590055 NZ_CAJZAS010000215.1 Protein Homology CDS 54540 55667 . + 0 ID=cds-WP_223964372.1;Parent=gene-LDO45_RS25170;Dbxref=GenBank:WP_223964372.1;Name=WP_223964372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497841.1;locus_tag=LDO45_RS25170;product=MBL fold metallo-hydrolase;protein_id=WP_223964372.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 57443 58138 . + . ID=gene-LDO45_RS25175;Name=LDO45_RS25175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25175;old_locus_tag=BDI4_590060 NZ_CAJZAS010000215.1 Protein Homology CDS 57443 58138 . + 0 ID=cds-WP_006759638.1;Parent=gene-LDO45_RS25175;Dbxref=GenBank:WP_006759638.1;Name=WP_006759638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399349.1;locus_tag=LDO45_RS25175;product=ParA family protein;protein_id=WP_006759638.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 58131 59162 . + . ID=gene-LDO45_RS25180;Name=LDO45_RS25180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25180;old_locus_tag=BDI4_590061 NZ_CAJZAS010000215.1 Protein Homology CDS 58131 59162 . + 0 ID=cds-WP_059530826.1;Parent=gene-LDO45_RS25180;Dbxref=GenBank:WP_059530826.1;Name=WP_059530826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660886.1;locus_tag=LDO45_RS25180;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_059530826.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 59258 60574 . - . ID=gene-LDO45_RS25185;Name=LDO45_RS25185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25185;old_locus_tag=BDI4_590062 NZ_CAJZAS010000215.1 Protein Homology CDS 59258 60574 . - 0 ID=cds-WP_059530829.1;Parent=gene-LDO45_RS25185;Dbxref=GenBank:WP_059530829.1;Name=WP_059530829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753023.1;locus_tag=LDO45_RS25185;product=replication initiation protein;protein_id=WP_059530829.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 63117 63443 . + . ID=gene-LDO45_RS25190;Name=LDO45_RS25190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25190;old_locus_tag=BDI4_590065 NZ_CAJZAS010000215.1 Protein Homology CDS 63117 63443 . + 0 ID=cds-WP_044848822.1;Parent=gene-LDO45_RS25190;Dbxref=GenBank:WP_044848822.1;Name=WP_044848822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759642.1;locus_tag=LDO45_RS25190;product=hypothetical protein;protein_id=WP_044848822.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 63811 64713 . - . ID=gene-LDO45_RS25195;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=LDO45_RS25195;old_locus_tag=BDI4_590067 NZ_CAJZAS010000215.1 Protein Homology CDS 63811 64713 . - 0 ID=cds-WP_223964374.1;Parent=gene-LDO45_RS25195;Dbxref=GenBank:WP_223964374.1;Name=WP_223964374.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=gcvA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489079.1;locus_tag=LDO45_RS25195;product=transcriptional regulator GcvA;protein_id=WP_223964374.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 64854 66143 . + . ID=gene-LDO45_RS25200;Name=LDO45_RS25200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25200;old_locus_tag=BDI4_590068 NZ_CAJZAS010000215.1 Protein Homology CDS 64854 66143 . + 0 ID=cds-WP_223964376.1;Parent=gene-LDO45_RS25200;Dbxref=GenBank:WP_223964376.1;Name=WP_223964376.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399354.1;locus_tag=LDO45_RS25200;product=adenylosuccinate synthase;protein_id=WP_223964376.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 66379 67320 . + . ID=gene-LDO45_RS25205;Name=LDO45_RS25205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25205;old_locus_tag=BDI4_590069 NZ_CAJZAS010000215.1 Protein Homology CDS 66379 67320 . + 0 ID=cds-WP_059697535.1;Parent=gene-LDO45_RS25205;Dbxref=GenBank:WP_059697535.1;Name=WP_059697535.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660882.1;locus_tag=LDO45_RS25205;product=LysR family transcriptional regulator;protein_id=WP_059697535.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 67640 68353 . - . ID=gene-LDO45_RS25210;Name=LDO45_RS25210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25210;old_locus_tag=BDI4_590071 NZ_CAJZAS010000215.1 Protein Homology CDS 67640 68353 . - 0 ID=cds-WP_223964378.1;Parent=gene-LDO45_RS25210;Dbxref=GenBank:WP_223964378.1;Name=WP_223964378.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660880.1;locus_tag=LDO45_RS25210;product=dienelactone hydrolase family protein;protein_id=WP_223964378.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 68665 68976 . - . ID=gene-LDO45_RS25215;Name=LDO45_RS25215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25215;old_locus_tag=BDI4_590072 NZ_CAJZAS010000215.1 Protein Homology CDS 68665 68976 . - 0 ID=cds-WP_223964379.1;Parent=gene-LDO45_RS25215;Dbxref=GenBank:WP_223964379.1;Name=WP_223964379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337171.1;locus_tag=LDO45_RS25215;product=DUF4148 domain-containing protein;protein_id=WP_223964379.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq pseudogene 69436 69583 . - . ID=gene-LDO45_RS25220;Name=LDO45_RS25220;end_range=69583,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS25220;partial=true;pseudo=true NZ_CAJZAS010000215.1 Protein Homology CDS 69436 69583 . - 0 ID=cds-LDO45_RS25220;Parent=gene-LDO45_RS25220;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=69583,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493824.1;locus_tag=LDO45_RS25220;partial=true;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 69987 70442 . + . ID=gene-LDO45_RS25225;Name=LDO45_RS25225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25225;old_locus_tag=BDI4_590074 NZ_CAJZAS010000215.1 Protein Homology CDS 69987 70442 . + 0 ID=cds-WP_223964381.1;Parent=gene-LDO45_RS25225;Dbxref=GenBank:WP_223964381.1;Name=WP_223964381.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006767020.1;locus_tag=LDO45_RS25225;product=antitoxin Xre/MbcA/ParS toxin-binding domain-containing protein;protein_id=WP_223964381.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 70439 70918 . + . ID=gene-LDO45_RS25230;Name=LDO45_RS25230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25230;old_locus_tag=BDI4_590075 NZ_CAJZAS010000215.1 Protein Homology CDS 70439 70918 . + 0 ID=cds-WP_059530847.1;Parent=gene-LDO45_RS25230;Dbxref=GenBank:WP_059530847.1;Name=WP_059530847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549376.1;locus_tag=LDO45_RS25230;product=RES family NAD+ phosphorylase;protein_id=WP_059530847.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 71335 71532 . + . ID=gene-LDO45_RS25235;Name=LDO45_RS25235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25235 NZ_CAJZAS010000215.1 GeneMarkS-2+ CDS 71335 71532 . + 0 ID=cds-WP_223964383.1;Parent=gene-LDO45_RS25235;Dbxref=GenBank:WP_223964383.1;Name=WP_223964383.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS25235;product=hypothetical protein;protein_id=WP_223964383.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 71695 72234 . + . ID=gene-LDO45_RS25240;Name=LDO45_RS25240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25240;old_locus_tag=BDI4_590077 NZ_CAJZAS010000215.1 Protein Homology CDS 71695 72234 . + 0 ID=cds-WP_223964385.1;Parent=gene-LDO45_RS25240;Dbxref=GenBank:WP_223964385.1;Name=WP_223964385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549383.1;locus_tag=LDO45_RS25240;product=hypothetical protein;protein_id=WP_223964385.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 72536 73297 . + . ID=gene-LDO45_RS25245;Name=LDO45_RS25245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25245;old_locus_tag=BDI4_590078 NZ_CAJZAS010000215.1 Protein Homology CDS 72536 73297 . + 0 ID=cds-WP_223964387.1;Parent=gene-LDO45_RS25245;Dbxref=GenBank:WP_223964387.1;Name=WP_223964387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487941.1;locus_tag=LDO45_RS25245;product=hypothetical protein;protein_id=WP_223964387.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 73626 74876 . + . ID=gene-LDO45_RS25250;Name=LDO45_RS25250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25250;old_locus_tag=BDI4_590079 NZ_CAJZAS010000215.1 Protein Homology CDS 73626 74876 . + 0 ID=cds-WP_223964389.1;Parent=gene-LDO45_RS25250;Dbxref=GenBank:WP_223964389.1;Name=WP_223964389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405536.1;locus_tag=LDO45_RS25250;product=DNA repair exonuclease;protein_id=WP_223964389.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 74880 78350 . + . ID=gene-LDO45_RS25255;Name=LDO45_RS25255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25255;old_locus_tag=BDI4_590080 NZ_CAJZAS010000215.1 Protein Homology CDS 74880 78350 . + 0 ID=cds-WP_223964390.1;Parent=gene-LDO45_RS25255;Dbxref=GenBank:WP_223964390.1;Name=WP_223964390.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217789.1;locus_tag=LDO45_RS25255;product=YhaN family protein;protein_id=WP_223964390.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 78472 78996 . + . ID=gene-LDO45_RS25260;Name=LDO45_RS25260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25260;old_locus_tag=BDI4_590081 NZ_CAJZAS010000215.1 Protein Homology CDS 78472 78996 . + 0 ID=cds-WP_044848835.1;Parent=gene-LDO45_RS25260;Dbxref=GenBank:WP_044848835.1;Name=WP_044848835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217790.1;locus_tag=LDO45_RS25260;product=HD domain-containing protein;protein_id=WP_044848835.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 79006 79695 . + . ID=gene-LDO45_RS25265;Name=LDO45_RS25265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25265;old_locus_tag=BDI4_590082 NZ_CAJZAS010000215.1 Protein Homology CDS 79006 79695 . + 0 ID=cds-WP_059690970.1;Parent=gene-LDO45_RS25265;Dbxref=GenBank:WP_059690970.1;Name=WP_059690970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372099.1;locus_tag=LDO45_RS25265;product=DUF429 domain-containing protein;protein_id=WP_059690970.1;transl_table=11 NZ_CAJZAS010000215.1 RefSeq gene 79885 80355 . - . ID=gene-LDO45_RS25270;Name=LDO45_RS25270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25270;old_locus_tag=BDI4_590084 NZ_CAJZAS010000215.1 Protein Homology CDS 79885 80355 . - 0 ID=cds-WP_223964394.1;Parent=gene-LDO45_RS25270;Dbxref=GenBank:WP_223964394.1;Name=WP_223964394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480968.1;locus_tag=LDO45_RS25270;product=ATPase;protein_id=WP_223964394.1;transl_table=11 ##sequence-region NZ_CAJZAS010000216.1 1 129157 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000216.1 RefSeq region 1 129157 . + . ID=NZ_CAJZAS010000216.1:1..129157;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_6 NZ_CAJZAS010000216.1 RefSeq gene 306 617 . + . ID=gene-LDO45_RS25275;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=LDO45_RS25275;old_locus_tag=BDI4_60001 NZ_CAJZAS010000216.1 Protein Homology CDS 306 617 . + 0 ID=cds-WP_004199280.1;Parent=gene-LDO45_RS25275;Dbxref=GenBank:WP_004199280.1;Name=WP_004199280.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199280.1;locus_tag=LDO45_RS25275;product=30S ribosomal protein S10;protein_id=WP_004199280.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 796 1446 . + . ID=gene-LDO45_RS25280;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=LDO45_RS25280;old_locus_tag=BDI4_60002 NZ_CAJZAS010000216.1 Protein Homology CDS 796 1446 . + 0 ID=cds-WP_006752926.1;Parent=gene-LDO45_RS25280;Dbxref=GenBank:WP_006752926.1;Name=WP_006752926.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212557.1;locus_tag=LDO45_RS25280;product=50S ribosomal protein L3;protein_id=WP_006752926.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 1446 2066 . + . ID=gene-LDO45_RS25285;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=LDO45_RS25285;old_locus_tag=BDI4_60003 NZ_CAJZAS010000216.1 Protein Homology CDS 1446 2066 . + 0 ID=cds-WP_006477192.1;Parent=gene-LDO45_RS25285;Dbxref=GenBank:WP_006477192.1;Name=WP_006477192.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350675.1;locus_tag=LDO45_RS25285;product=50S ribosomal protein L4;protein_id=WP_006477192.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 2063 2377 . + . ID=gene-LDO45_RS25290;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=LDO45_RS25290;old_locus_tag=BDI4_60004 NZ_CAJZAS010000216.1 Protein Homology CDS 2063 2377 . + 0 ID=cds-WP_004199275.1;Parent=gene-LDO45_RS25290;Dbxref=GenBank:WP_004199275.1;Name=WP_004199275.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008343846.1;locus_tag=LDO45_RS25290;product=50S ribosomal protein L23;protein_id=WP_004199275.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 2380 3207 . + . ID=gene-LDO45_RS25295;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=LDO45_RS25295;old_locus_tag=BDI4_60005 NZ_CAJZAS010000216.1 Protein Homology CDS 2380 3207 . + 0 ID=cds-WP_006482900.1;Parent=gene-LDO45_RS25295;Dbxref=GenBank:WP_006482900.1;Name=WP_006482900.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009770933.1;locus_tag=LDO45_RS25295;product=50S ribosomal protein L2;protein_id=WP_006482900.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 3218 3493 . + . ID=gene-LDO45_RS25300;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=LDO45_RS25300;old_locus_tag=BDI4_60006 NZ_CAJZAS010000216.1 Protein Homology CDS 3218 3493 . + 0 ID=cds-WP_004199273.1;Parent=gene-LDO45_RS25300;Dbxref=GenBank:WP_004199273.1;Name=WP_004199273.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440478.1;locus_tag=LDO45_RS25300;product=30S ribosomal protein S19;protein_id=WP_004199273.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 3506 3835 . + . ID=gene-LDO45_RS25305;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=LDO45_RS25305;old_locus_tag=BDI4_60007 NZ_CAJZAS010000216.1 Protein Homology CDS 3506 3835 . + 0 ID=cds-WP_004199272.1;Parent=gene-LDO45_RS25305;Dbxref=GenBank:WP_004199272.1;Name=WP_004199272.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018420150.1;locus_tag=LDO45_RS25305;product=50S ribosomal protein L22;protein_id=WP_004199272.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 3847 4647 . + . ID=gene-LDO45_RS25310;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=LDO45_RS25310;old_locus_tag=BDI4_60008 NZ_CAJZAS010000216.1 Protein Homology CDS 3847 4647 . + 0 ID=cds-WP_006482899.1;Parent=gene-LDO45_RS25310;Dbxref=GenBank:WP_006482899.1;Name=WP_006482899.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185240.1;locus_tag=LDO45_RS25310;product=30S ribosomal protein S3;protein_id=WP_006482899.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 4650 5066 . + . ID=gene-LDO45_RS25315;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=LDO45_RS25315;old_locus_tag=BDI4_60009 NZ_CAJZAS010000216.1 Protein Homology CDS 4650 5066 . + 0 ID=cds-WP_059468475.1;Parent=gene-LDO45_RS25315;Dbxref=GenBank:WP_059468475.1;Name=WP_059468475.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013340739.1;locus_tag=LDO45_RS25315;product=50S ribosomal protein L16;protein_id=WP_059468475.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 5076 5270 . + . ID=gene-LDO45_RS25320;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=LDO45_RS25320;old_locus_tag=BDI4_60010 NZ_CAJZAS010000216.1 Protein Homology CDS 5076 5270 . + 0 ID=cds-WP_006400652.1;Parent=gene-LDO45_RS25320;Dbxref=GenBank:WP_006400652.1;Name=WP_006400652.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199856.1;locus_tag=LDO45_RS25320;product=50S ribosomal protein L29;protein_id=WP_006400652.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 5267 5539 . + . ID=gene-LDO45_RS25325;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=LDO45_RS25325;old_locus_tag=BDI4_60011 NZ_CAJZAS010000216.1 Protein Homology CDS 5267 5539 . + 0 ID=cds-WP_006752928.1;Parent=gene-LDO45_RS25325;Dbxref=GenBank:WP_006752928.1;Name=WP_006752928.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006998479.1;locus_tag=LDO45_RS25325;product=30S ribosomal protein S17;protein_id=WP_006752928.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 5849 6217 . + . ID=gene-LDO45_RS25330;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=LDO45_RS25330;old_locus_tag=BDI4_60012 NZ_CAJZAS010000216.1 Protein Homology CDS 5849 6217 . + 0 ID=cds-WP_006752929.1;Parent=gene-LDO45_RS25330;Dbxref=GenBank:WP_006752929.1;Name=WP_006752929.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009124801.1;locus_tag=LDO45_RS25330;product=50S ribosomal protein L14;protein_id=WP_006752929.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 6227 6535 . + . ID=gene-LDO45_RS25335;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=LDO45_RS25335;old_locus_tag=BDI4_60013 NZ_CAJZAS010000216.1 Protein Homology CDS 6227 6535 . + 0 ID=cds-WP_006477187.1;Parent=gene-LDO45_RS25335;Dbxref=GenBank:WP_006477187.1;Name=WP_006477187.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197950.1;locus_tag=LDO45_RS25335;product=50S ribosomal protein L24;protein_id=WP_006477187.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 6552 7091 . + . ID=gene-LDO45_RS25340;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=LDO45_RS25340;old_locus_tag=BDI4_60014 NZ_CAJZAS010000216.1 Protein Homology CDS 6552 7091 . + 0 ID=cds-WP_006482882.1;Parent=gene-LDO45_RS25340;Dbxref=GenBank:WP_006482882.1;Name=WP_006482882.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007875323.1;locus_tag=LDO45_RS25340;product=50S ribosomal protein L5;protein_id=WP_006482882.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 7099 7404 . + . ID=gene-LDO45_RS25345;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=LDO45_RS25345;old_locus_tag=BDI4_60015 NZ_CAJZAS010000216.1 Protein Homology CDS 7099 7404 . + 0 ID=cds-WP_006482884.1;Parent=gene-LDO45_RS25345;Dbxref=GenBank:WP_006482884.1;Name=WP_006482884.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197948.1;locus_tag=LDO45_RS25345;product=30S ribosomal protein S14;protein_id=WP_006482884.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 7419 7814 . + . ID=gene-LDO45_RS25350;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=LDO45_RS25350;old_locus_tag=BDI4_60016 NZ_CAJZAS010000216.1 Protein Homology CDS 7419 7814 . + 0 ID=cds-WP_006477185.1;Parent=gene-LDO45_RS25350;Dbxref=GenBank:WP_006477185.1;Name=WP_006477185.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011799763.1;locus_tag=LDO45_RS25350;product=30S ribosomal protein S8;protein_id=WP_006477185.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 7833 8363 . + . ID=gene-LDO45_RS25355;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=LDO45_RS25355;old_locus_tag=BDI4_60017 NZ_CAJZAS010000216.1 Protein Homology CDS 7833 8363 . + 0 ID=cds-WP_006758786.1;Parent=gene-LDO45_RS25355;Dbxref=GenBank:WP_006758786.1;Name=WP_006758786.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734367.1;locus_tag=LDO45_RS25355;product=50S ribosomal protein L6;protein_id=WP_006758786.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 8376 8741 . + . ID=gene-LDO45_RS25360;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=LDO45_RS25360;old_locus_tag=BDI4_60018 NZ_CAJZAS010000216.1 Protein Homology CDS 8376 8741 . + 0 ID=cds-WP_006477183.1;Parent=gene-LDO45_RS25360;Dbxref=GenBank:WP_006477183.1;Name=WP_006477183.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013434799.1;locus_tag=LDO45_RS25360;product=50S ribosomal protein L18;protein_id=WP_006477183.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 8756 9274 . + . ID=gene-LDO45_RS25365;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=LDO45_RS25365;old_locus_tag=BDI4_60019 NZ_CAJZAS010000216.1 Protein Homology CDS 8756 9274 . + 0 ID=cds-WP_006752931.1;Parent=gene-LDO45_RS25365;Dbxref=GenBank:WP_006752931.1;Name=WP_006752931.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011002906.1;locus_tag=LDO45_RS25365;product=30S ribosomal protein S5;protein_id=WP_006752931.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 9290 9472 . + . ID=gene-LDO45_RS25370;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=LDO45_RS25370;old_locus_tag=BDI4_60020 NZ_CAJZAS010000216.1 Protein Homology CDS 9290 9472 . + 0 ID=cds-WP_006400644.1;Parent=gene-LDO45_RS25370;Dbxref=GenBank:WP_006400644.1;Name=WP_006400644.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006998470.1;locus_tag=LDO45_RS25370;product=50S ribosomal protein L30;protein_id=WP_006400644.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 9499 9933 . + . ID=gene-LDO45_RS25375;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=LDO45_RS25375;old_locus_tag=BDI4_60021 NZ_CAJZAS010000216.1 Protein Homology CDS 9499 9933 . + 0 ID=cds-WP_006482880.1;Parent=gene-LDO45_RS25375;Dbxref=GenBank:WP_006482880.1;Name=WP_006482880.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197941.1;locus_tag=LDO45_RS25375;product=50S ribosomal protein L15;protein_id=WP_006482880.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 9976 11325 . + . ID=gene-LDO45_RS25380;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=LDO45_RS25380;old_locus_tag=BDI4_60022 NZ_CAJZAS010000216.1 Protein Homology CDS 9976 11325 . + 0 ID=cds-WP_006400642.1;Parent=gene-LDO45_RS25380;Dbxref=GenBank:WP_006400642.1;Name=WP_006400642.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440464.1;locus_tag=LDO45_RS25380;product=preprotein translocase subunit SecY;protein_id=WP_006400642.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 11335 11553 . + . ID=gene-LDO45_RS25385;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=LDO45_RS25385;old_locus_tag=BDI4_60023 NZ_CAJZAS010000216.1 Protein Homology CDS 11335 11553 . + 0 ID=cds-WP_004521905.1;Parent=gene-LDO45_RS25385;Dbxref=GenBank:WP_004521905.1;Name=WP_004521905.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018149800.1;locus_tag=LDO45_RS25385;product=translation initiation factor IF-1;protein_id=WP_004521905.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 11574 11690 . + . ID=gene-LDO45_RS25390;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=LDO45_RS25390 NZ_CAJZAS010000216.1 Protein Homology CDS 11574 11690 . + 0 ID=cds-WP_004199844.1;Parent=gene-LDO45_RS25390;Dbxref=GenBank:WP_004199844.1;Name=WP_004199844.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199844.1;locus_tag=LDO45_RS25390;product=50S ribosomal protein L36;protein_id=WP_004199844.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 11729 12094 . + . ID=gene-LDO45_RS25395;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=LDO45_RS25395;old_locus_tag=BDI4_60024 NZ_CAJZAS010000216.1 Protein Homology CDS 11729 12094 . + 0 ID=cds-WP_039323572.1;Parent=gene-LDO45_RS25395;Dbxref=GenBank:WP_039323572.1;Name=WP_039323572.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440462.1;locus_tag=LDO45_RS25395;product=30S ribosomal protein S13;protein_id=WP_039323572.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 12123 12524 . + . ID=gene-LDO45_RS25400;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=LDO45_RS25400;old_locus_tag=BDI4_60025 NZ_CAJZAS010000216.1 Protein Homology CDS 12123 12524 . + 0 ID=cds-WP_004197937.1;Parent=gene-LDO45_RS25400;Dbxref=GenBank:WP_004197937.1;Name=WP_004197937.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106947.1;locus_tag=LDO45_RS25400;product=30S ribosomal protein S11;protein_id=WP_004197937.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 12680 13303 . + . ID=gene-LDO45_RS25405;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=LDO45_RS25405;old_locus_tag=BDI4_60026 NZ_CAJZAS010000216.1 Protein Homology CDS 12680 13303 . + 0 ID=cds-WP_012362893.1;Parent=gene-LDO45_RS25405;Dbxref=GenBank:WP_012362893.1;Name=WP_012362893.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009888438.1;locus_tag=LDO45_RS25405;product=30S ribosomal protein S4;protein_id=WP_012362893.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 13428 14405 . + . ID=gene-LDO45_RS25410;Name=LDO45_RS25410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25410;old_locus_tag=BDI4_60027 NZ_CAJZAS010000216.1 Protein Homology CDS 13428 14405 . + 0 ID=cds-WP_006477176.1;Parent=gene-LDO45_RS25410;Dbxref=GenBank:WP_006477176.1;Name=WP_006477176.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed 5'-3' RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440459.1;locus_tag=LDO45_RS25410;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_006477176.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 14542 14937 . + . ID=gene-LDO45_RS25415;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=LDO45_RS25415;old_locus_tag=BDI4_60028 NZ_CAJZAS010000216.1 Protein Homology CDS 14542 14937 . + 0 ID=cds-WP_006477175.1;Parent=gene-LDO45_RS25415;Dbxref=GenBank:WP_006477175.1;Name=WP_006477175.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477175.1;locus_tag=LDO45_RS25415;product=50S ribosomal protein L17;protein_id=WP_006477175.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 15145 15471 . + . ID=gene-LDO45_RS25420;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=LDO45_RS25420;old_locus_tag=BDI4_60030 NZ_CAJZAS010000216.1 Protein Homology CDS 15145 15471 . + 0 ID=cds-WP_057924809.1;Parent=gene-LDO45_RS25420;Dbxref=GenBank:WP_057924809.1;Name=WP_057924809.1;Ontology_term=GO:0010038;gbkey=CDS;gene=cutA;go_process=response to metal ion|0010038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199838.1;locus_tag=LDO45_RS25420;product=divalent-cation tolerance protein CutA;protein_id=WP_057924809.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 15464 17311 . + . ID=gene-LDO45_RS25425;Name=dsbD;gbkey=Gene;gene=dsbD;gene_biotype=protein_coding;locus_tag=LDO45_RS25425;old_locus_tag=BDI4_60031 NZ_CAJZAS010000216.1 Protein Homology CDS 15464 17311 . + 0 ID=cds-WP_223964397.1;Parent=gene-LDO45_RS25425;Dbxref=GenBank:WP_223964397.1;Name=WP_223964397.1;Ontology_term=GO:0047134;gbkey=CDS;gene=dsbD;go_function=protein-disulfide reductase (NAD(P)H) activity|0047134||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327751.1;locus_tag=LDO45_RS25425;product=protein-disulfide reductase DsbD;protein_id=WP_223964397.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 17427 18425 . - . ID=gene-LDO45_RS25430;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=LDO45_RS25430;old_locus_tag=BDI4_60032 NZ_CAJZAS010000216.1 Protein Homology CDS 17427 18425 . - 0 ID=cds-WP_059702546.1;Parent=gene-LDO45_RS25430;Dbxref=GenBank:WP_059702546.1;Name=WP_059702546.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898350.1;locus_tag=LDO45_RS25430;product=porphobilinogen synthase;protein_id=WP_059702546.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 18679 19338 . - . ID=gene-LDO45_RS25435;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=LDO45_RS25435;old_locus_tag=BDI4_60033 NZ_CAJZAS010000216.1 Protein Homology CDS 18679 19338 . - 0 ID=cds-WP_059505749.1;Parent=gene-LDO45_RS25435;Dbxref=GenBank:WP_059505749.1;Name=WP_059505749.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350683.1;locus_tag=LDO45_RS25435;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_059505749.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 19557 20210 . + . ID=gene-LDO45_RS25440;Name=LDO45_RS25440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25440;old_locus_tag=BDI4_60034 NZ_CAJZAS010000216.1 Protein Homology CDS 19557 20210 . + 0 ID=cds-WP_223964477.1;Parent=gene-LDO45_RS25440;Dbxref=GenBank:WP_223964477.1;Name=WP_223964477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492295.1;locus_tag=LDO45_RS25440;product=cytochrome c;protein_id=WP_223964477.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 20412 22628 . + . ID=gene-LDO45_RS25445;Name=LDO45_RS25445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25445;old_locus_tag=BDI4_60035 NZ_CAJZAS010000216.1 Protein Homology CDS 20412 22628 . + 0 ID=cds-WP_223964399.1;Parent=gene-LDO45_RS25445;Dbxref=GenBank:WP_223964399.1;Name=WP_223964399.1;Ontology_term=GO:0017004,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883014.1;locus_tag=LDO45_RS25445;product=cytochrome c biogenesis protein ResB;protein_id=WP_223964399.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 22633 23823 . + . ID=gene-LDO45_RS25450;Name=ccsB;gbkey=Gene;gene=ccsB;gene_biotype=protein_coding;locus_tag=LDO45_RS25450;old_locus_tag=BDI4_60036 NZ_CAJZAS010000216.1 Protein Homology CDS 22633 23823 . + 0 ID=cds-WP_059692389.1;Parent=gene-LDO45_RS25450;Dbxref=GenBank:WP_059692389.1;Name=WP_059692389.1;Ontology_term=GO:0017004,GO:0020037;gbkey=CDS;gene=ccsB;go_function=heme binding|0020037||IEA;go_process=cytochrome complex assembly|0017004||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655767.1;locus_tag=LDO45_RS25450;product=c-type cytochrome biogenesis protein CcsB;protein_id=WP_059692389.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 23983 24978 . + . ID=gene-LDO45_RS25455;Name=msrP;gbkey=Gene;gene=msrP;gene_biotype=protein_coding;locus_tag=LDO45_RS25455;old_locus_tag=BDI4_60038 NZ_CAJZAS010000216.1 Protein Homology CDS 23983 24978 . + 0 ID=cds-WP_059702643.1;Parent=gene-LDO45_RS25455;Dbxref=GenBank:WP_059702643.1;Name=WP_059702643.1;Ontology_term=GO:0030091,GO:0016667,GO:0043546;gbkey=CDS;gene=msrP;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA,molybdopterin cofactor binding|0043546||IEA;go_process=protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407013.1;locus_tag=LDO45_RS25455;product=protein-methionine-sulfoxide reductase catalytic subunit MsrP;protein_id=WP_059702643.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 24999 25688 . + . ID=gene-LDO45_RS25460;Name=msrQ;gbkey=Gene;gene=msrQ;gene_biotype=protein_coding;locus_tag=LDO45_RS25460;old_locus_tag=BDI4_60039 NZ_CAJZAS010000216.1 Protein Homology CDS 24999 25688 . + 0 ID=cds-WP_059535669.1;Parent=gene-LDO45_RS25460;Dbxref=GenBank:WP_059535669.1;Name=WP_059535669.1;gbkey=CDS;gene=msrQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494453.1;locus_tag=LDO45_RS25460;product=protein-methionine-sulfoxide reductase heme-binding subunit MsrQ;protein_id=WP_059535669.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 25775 26056 . - . ID=gene-LDO45_RS25465;Name=LDO45_RS25465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25465 NZ_CAJZAS010000216.1 Protein Homology CDS 25775 26056 . - 0 ID=cds-WP_059535586.1;Parent=gene-LDO45_RS25465;Dbxref=GenBank:WP_059535586.1;Name=WP_059535586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758797.1;locus_tag=LDO45_RS25465;product=lipoprotein;protein_id=WP_059535586.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 26093 26419 . + . ID=gene-LDO45_RS25470;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=LDO45_RS25470;old_locus_tag=BDI4_60040 NZ_CAJZAS010000216.1 Protein Homology CDS 26093 26419 . + 0 ID=cds-WP_059692387.1;Parent=gene-LDO45_RS25470;Dbxref=GenBank:WP_059692387.1;Name=WP_059692387.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004196764.1;locus_tag=LDO45_RS25470;product=iron donor protein CyaY;protein_id=WP_059692387.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 26518 28905 . - . ID=gene-LDO45_RS25475;Name=LDO45_RS25475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25475;old_locus_tag=BDI4_60041 NZ_CAJZAS010000216.1 Protein Homology CDS 26518 28905 . - 0 ID=cds-WP_374109551.1;Parent=gene-LDO45_RS25475;Dbxref=GenBank:WP_374109551.1;Name=WP_374109551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898342.1;locus_tag=LDO45_RS25475;product=penicillin-binding protein 1A;protein_id=WP_374109551.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 29132 30055 . + . ID=gene-LDO45_RS25480;Name=LDO45_RS25480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25480;old_locus_tag=BDI4_60042 NZ_CAJZAS010000216.1 Protein Homology CDS 29132 30055 . + 0 ID=cds-WP_059535591.1;Parent=gene-LDO45_RS25480;Dbxref=GenBank:WP_059535591.1;Name=WP_059535591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655772.1;locus_tag=LDO45_RS25480;product=hypothetical protein;protein_id=WP_059535591.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 30052 30687 . + . ID=gene-LDO45_RS25485;Name=LDO45_RS25485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25485;old_locus_tag=BDI4_60043 NZ_CAJZAS010000216.1 Protein Homology CDS 30052 30687 . + 0 ID=cds-WP_223964403.1;Parent=gene-LDO45_RS25485;Dbxref=GenBank:WP_223964403.1;Name=WP_223964403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362904.1;locus_tag=LDO45_RS25485;product=fimbrial protein;protein_id=WP_223964403.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 30684 31553 . + . ID=gene-LDO45_RS25490;Name=LDO45_RS25490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25490;old_locus_tag=BDI4_60044 NZ_CAJZAS010000216.1 Protein Homology CDS 30684 31553 . + 0 ID=cds-WP_223964405.1;Parent=gene-LDO45_RS25490;Dbxref=GenBank:WP_223964405.1;Name=WP_223964405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411969.1;locus_tag=LDO45_RS25490;product=pilus assembly protein;protein_id=WP_223964405.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 31550 33193 . + . ID=gene-LDO45_RS25495;Name=LDO45_RS25495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25495;old_locus_tag=BDI4_60046 NZ_CAJZAS010000216.1 Protein Homology CDS 31550 33193 . + 0 ID=cds-WP_223964407.1;Parent=gene-LDO45_RS25495;Dbxref=GenBank:WP_223964407.1;Name=WP_223964407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362906.1;locus_tag=LDO45_RS25495;product=type IV pilus secretin PilQ;protein_id=WP_223964407.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 33234 33788 . + . ID=gene-LDO45_RS25500;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=LDO45_RS25500;old_locus_tag=BDI4_60047 NZ_CAJZAS010000216.1 Protein Homology CDS 33234 33788 . + 0 ID=cds-WP_059535597.1;Parent=gene-LDO45_RS25500;Dbxref=GenBank:WP_059535597.1;Name=WP_059535597.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492299.1;locus_tag=LDO45_RS25500;product=shikimate kinase AroK;protein_id=WP_059535597.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 33785 34864 . + . ID=gene-LDO45_RS25505;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=LDO45_RS25505;old_locus_tag=BDI4_60048 NZ_CAJZAS010000216.1 Protein Homology CDS 33785 34864 . + 0 ID=cds-WP_059692381.1;Parent=gene-LDO45_RS25505;Dbxref=GenBank:WP_059692381.1;Name=WP_059692381.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004545609.1;locus_tag=LDO45_RS25505;product=3-dehydroquinate synthase;protein_id=WP_059692381.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 34906 36114 . + . ID=gene-LDO45_RS25510;Name=LDO45_RS25510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25510;old_locus_tag=BDI4_60049 NZ_CAJZAS010000216.1 Protein Homology CDS 34906 36114 . + 0 ID=cds-WP_374109550.1;Parent=gene-LDO45_RS25510;Dbxref=GenBank:WP_374109550.1;Name=WP_374109550.1;Ontology_term=GO:0016793;gbkey=CDS;go_function=triphosphoric monoester hydrolase activity|0016793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411276.1;locus_tag=LDO45_RS25510;product=deoxyguanosinetriphosphate triphosphohydrolase;protein_id=WP_374109550.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 36205 37539 . + . ID=gene-LDO45_RS25515;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=LDO45_RS25515;old_locus_tag=BDI4_60050 NZ_CAJZAS010000216.1 Protein Homology CDS 36205 37539 . + 0 ID=cds-WP_223964409.1;Parent=gene-LDO45_RS25515;Dbxref=GenBank:WP_223964409.1;Name=WP_223964409.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407003.1;locus_tag=LDO45_RS25515;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_223964409.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 37639 38523 . + . ID=gene-LDO45_RS25520;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=LDO45_RS25520;old_locus_tag=BDI4_60052 NZ_CAJZAS010000216.1 Protein Homology CDS 37639 38523 . + 0 ID=cds-WP_057924841.1;Parent=gene-LDO45_RS25520;Dbxref=GenBank:WP_057924841.1;Name=WP_057924841.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906395.1;locus_tag=LDO45_RS25520;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_057924841.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 38520 39365 . + . ID=gene-LDO45_RS25525;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=LDO45_RS25525;old_locus_tag=BDI4_60053 NZ_CAJZAS010000216.1 Protein Homology CDS 38520 39365 . + 0 ID=cds-WP_059535604.1;Parent=gene-LDO45_RS25525;Dbxref=GenBank:WP_059535604.1;Name=WP_059535604.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477155.1;locus_tag=LDO45_RS25525;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_059535604.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 39398 40483 . + . ID=gene-LDO45_RS25530;Name=LDO45_RS25530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25530;old_locus_tag=BDI4_60054 NZ_CAJZAS010000216.1 Protein Homology CDS 39398 40483 . + 0 ID=cds-WP_059702559.1;Parent=gene-LDO45_RS25530;Dbxref=GenBank:WP_059702559.1;Name=WP_059702559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004547598.1;locus_tag=LDO45_RS25530;product=sn-glycerol-3-phosphate import ATP-binding protein UgpC;protein_id=WP_059702559.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 40512 41276 . + . ID=gene-LDO45_RS25535;Name=ugpQ;gbkey=Gene;gene=ugpQ;gene_biotype=protein_coding;locus_tag=LDO45_RS25535;old_locus_tag=BDI4_60055 NZ_CAJZAS010000216.1 Protein Homology CDS 40512 41276 . + 0 ID=cds-WP_223964411.1;Parent=gene-LDO45_RS25535;Dbxref=GenBank:WP_223964411.1;Name=WP_223964411.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=ugpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883032.1;locus_tag=LDO45_RS25535;product=glycerophosphodiester phosphodiesterase;protein_id=WP_223964411.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 41441 42172 . - . ID=gene-LDO45_RS25540;Name=LDO45_RS25540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25540;old_locus_tag=BDI4_60056 NZ_CAJZAS010000216.1 Protein Homology CDS 41441 42172 . - 0 ID=cds-WP_059692376.1;Parent=gene-LDO45_RS25540;Dbxref=GenBank:WP_059692376.1;Name=WP_059692376.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350702.1;locus_tag=LDO45_RS25540;product=OmpW family protein;protein_id=WP_059692376.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 42366 43079 . + . ID=gene-LDO45_RS25545;Name=LDO45_RS25545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25545;old_locus_tag=BDI4_60058 NZ_CAJZAS010000216.1 Protein Homology CDS 42366 43079 . + 0 ID=cds-WP_059467849.1;Parent=gene-LDO45_RS25545;Dbxref=GenBank:WP_059467849.1;Name=WP_059467849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898328.1;locus_tag=LDO45_RS25545;product=transposase;protein_id=WP_059467849.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 43368 48071 . + . ID=gene-LDO45_RS25550;Name=LDO45_RS25550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25550;old_locus_tag=BDI4_60059 NZ_CAJZAS010000216.1 Protein Homology CDS 43368 48071 . + 0 ID=cds-WP_223964413.1;Parent=gene-LDO45_RS25550;Dbxref=GenBank:WP_223964413.1;Name=WP_223964413.1;Ontology_term=GO:0006537,GO:0015930,GO:0016638;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;go_process=glutamate biosynthetic process|0006537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477150.1;locus_tag=LDO45_RS25550;product=glutamate synthase-related protein;protein_id=WP_223964413.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 48157 49623 . + . ID=gene-LDO45_RS25555;Name=LDO45_RS25555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25555;old_locus_tag=BDI4_60060 NZ_CAJZAS010000216.1 Protein Homology CDS 48157 49623 . + 0 ID=cds-WP_059535614.1;Parent=gene-LDO45_RS25555;Dbxref=GenBank:WP_059535614.1;Name=WP_059535614.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016346426.1;locus_tag=LDO45_RS25555;product=glutamate synthase subunit beta;protein_id=WP_059535614.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 49931 51421 . + . ID=gene-LDO45_RS25560;Name=LDO45_RS25560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25560;old_locus_tag=BDI4_60061 NZ_CAJZAS010000216.1 Protein Homology CDS 49931 51421 . + 0 ID=cds-WP_059702564.1;Parent=gene-LDO45_RS25560;Dbxref=GenBank:WP_059702564.1;Name=WP_059702564.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400606.1;locus_tag=LDO45_RS25560;product=sodium:alanine symporter family protein;protein_id=WP_059702564.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 51418 51966 . + . ID=gene-LDO45_RS25565;Name=thpR;gbkey=Gene;gene=thpR;gene_biotype=protein_coding;locus_tag=LDO45_RS25565;old_locus_tag=BDI4_60062 NZ_CAJZAS010000216.1 Protein Homology CDS 51418 51966 . + 0 ID=cds-WP_223964415.1;Parent=gene-LDO45_RS25565;Dbxref=GenBank:WP_223964415.1;Name=WP_223964415.1;Ontology_term=GO:0008033,GO:0008664;gbkey=CDS;gene=thpR;go_function=RNA 2'%2C3'-cyclic 3'-phosphodiesterase activity|0008664||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752968.1;locus_tag=LDO45_RS25565;product=RNA 2'%2C3'-cyclic phosphodiesterase;protein_id=WP_223964415.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 52035 53804 . - . ID=gene-LDO45_RS25570;Name=LDO45_RS25570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25570;old_locus_tag=BDI4_60063 NZ_CAJZAS010000216.1 Protein Homology CDS 52035 53804 . - 0 ID=cds-WP_059535620.1;Parent=gene-LDO45_RS25570;Dbxref=GenBank:WP_059535620.1;Name=WP_059535620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400601.1;locus_tag=LDO45_RS25570;product=ABC transporter ATP-binding protein/permease;protein_id=WP_059535620.1;transl_table=11 NZ_CAJZAS010000216.1 cmsearch riboswitch 54074 54197 . + . ID=id-NZ_CAJZAS010000216.1:54074..54197;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_CAJZAS010000216.1 RefSeq gene 54432 55568 . + . ID=gene-LDO45_RS25575;Name=LDO45_RS25575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25575;old_locus_tag=BDI4_60064 NZ_CAJZAS010000216.1 Protein Homology CDS 54432 55568 . + 0 ID=cds-WP_223964417.1;Parent=gene-LDO45_RS25575;Dbxref=GenBank:WP_223964417.1;Name=WP_223964417.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400599.1;locus_tag=LDO45_RS25575;product=FAD-dependent oxidoreductase;protein_id=WP_223964417.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 55601 55798 . + . ID=gene-LDO45_RS25580;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=LDO45_RS25580;old_locus_tag=BDI4_60065 NZ_CAJZAS010000216.1 Protein Homology CDS 55601 55798 . + 0 ID=cds-WP_014898319.1;Parent=gene-LDO45_RS25580;Dbxref=GenBank:WP_014898319.1;Name=WP_014898319.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009888501.1;locus_tag=LDO45_RS25580;product=sulfur carrier protein ThiS;protein_id=WP_014898319.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 55838 56653 . + . ID=gene-LDO45_RS25585;Name=LDO45_RS25585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25585;old_locus_tag=BDI4_60067 NZ_CAJZAS010000216.1 Protein Homology CDS 55838 56653 . + 0 ID=cds-WP_006755423.1;Parent=gene-LDO45_RS25585;Dbxref=GenBank:WP_006755423.1;Name=WP_006755423.1;Ontology_term=GO:1990107;gbkey=CDS;go_function=thiazole synthase activity|1990107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106891.1;locus_tag=LDO45_RS25585;product=thiazole synthase;protein_id=WP_006755423.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 56650 57774 . + . ID=gene-LDO45_RS25590;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=LDO45_RS25590;old_locus_tag=BDI4_60066 NZ_CAJZAS010000216.1 Protein Homology CDS 56650 57774 . + 0 ID=cds-WP_223964419.1;Parent=gene-LDO45_RS25590;Dbxref=GenBank:WP_223964419.1;Name=WP_223964419.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350715.1;locus_tag=LDO45_RS25590;product=thiamine phosphate synthase;protein_id=WP_223964419.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 57859 58680 . + . ID=gene-LDO45_RS25595;Name=LDO45_RS25595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25595;old_locus_tag=BDI4_60068 NZ_CAJZAS010000216.1 Protein Homology CDS 57859 58680 . + 0 ID=cds-WP_059535623.1;Parent=gene-LDO45_RS25595;Dbxref=GenBank:WP_059535623.1;Name=WP_059535623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333587.1;locus_tag=LDO45_RS25595;product=ABC transporter ATP-binding protein;protein_id=WP_059535623.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 58677 59444 . + . ID=gene-LDO45_RS25600;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=LDO45_RS25600;old_locus_tag=BDI4_60069 NZ_CAJZAS010000216.1 Protein Homology CDS 58677 59444 . + 0 ID=cds-WP_059535625.1;Parent=gene-LDO45_RS25600;Dbxref=GenBank:WP_059535625.1;Name=WP_059535625.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734415.1;locus_tag=LDO45_RS25600;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_059535625.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 59469 60029 . + . ID=gene-LDO45_RS25605;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=LDO45_RS25605;old_locus_tag=BDI4_60070 NZ_CAJZAS010000216.1 Protein Homology CDS 59469 60029 . + 0 ID=cds-WP_059692370.1;Parent=gene-LDO45_RS25605;Dbxref=GenBank:WP_059692370.1;Name=WP_059692370.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400593.1;locus_tag=LDO45_RS25605;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_059692370.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 60062 61027 . + . ID=gene-LDO45_RS25610;Name=LDO45_RS25610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25610;old_locus_tag=BDI4_60072 NZ_CAJZAS010000216.1 Protein Homology CDS 60062 61027 . + 0 ID=cds-WP_059692369.1;Parent=gene-LDO45_RS25610;Dbxref=GenBank:WP_059692369.1;Name=WP_059692369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362925.1;locus_tag=LDO45_RS25610;product=VacJ family lipoprotein;protein_id=WP_059692369.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 61138 61767 . + . ID=gene-LDO45_RS25615;Name=LDO45_RS25615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25615;old_locus_tag=BDI4_60071 NZ_CAJZAS010000216.1 Protein Homology CDS 61138 61767 . + 0 ID=cds-WP_059535680.1;Parent=gene-LDO45_RS25615;Dbxref=GenBank:WP_059535680.1;Name=WP_059535680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106880.1;locus_tag=LDO45_RS25615;product=phospholipid-binding protein MlaC;protein_id=WP_059535680.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 61764 62039 . + . ID=gene-LDO45_RS25620;Name=LDO45_RS25620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25620;old_locus_tag=BDI4_60073 NZ_CAJZAS010000216.1 Protein Homology CDS 61764 62039 . + 0 ID=cds-WP_223964421.1;Parent=gene-LDO45_RS25620;Dbxref=GenBank:WP_223964421.1;Name=WP_223964421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602125.1;locus_tag=LDO45_RS25620;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_223964421.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 62232 63158 . + . ID=gene-LDO45_RS25625;Name=LDO45_RS25625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25625;old_locus_tag=BDI4_60074 NZ_CAJZAS010000216.1 Protein Homology CDS 62232 63158 . + 0 ID=cds-WP_059535631.1;Parent=gene-LDO45_RS25625;Dbxref=GenBank:WP_059535631.1;Name=WP_059535631.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554063.1;locus_tag=LDO45_RS25625;product=ABC transporter ATP-binding protein;protein_id=WP_059535631.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 63155 63910 . + . ID=gene-LDO45_RS25630;Name=LDO45_RS25630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25630;old_locus_tag=BDI4_60075 NZ_CAJZAS010000216.1 Protein Homology CDS 63155 63910 . + 0 ID=cds-WP_059535633.1;Parent=gene-LDO45_RS25630;Dbxref=GenBank:WP_059535633.1;Name=WP_059535633.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013696427.1;locus_tag=LDO45_RS25630;product=ABC transporter permease;protein_id=WP_059535633.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 63961 64200 . + . ID=gene-LDO45_RS25635;Name=LDO45_RS25635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25635;old_locus_tag=BDI4_60076 NZ_CAJZAS010000216.1 Protein Homology CDS 63961 64200 . + 0 ID=cds-WP_006477131.1;Parent=gene-LDO45_RS25635;Dbxref=GenBank:WP_006477131.1;Name=WP_006477131.1;Ontology_term=GO:0051537,GO:1990229;gbkey=CDS;go_component=iron-sulfur cluster assembly complex|1990229||IEA;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029348.1;locus_tag=LDO45_RS25635;product=BolA family protein;protein_id=WP_006477131.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 64214 65563 . + . ID=gene-LDO45_RS25640;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=LDO45_RS25640;old_locus_tag=BDI4_60077 NZ_CAJZAS010000216.1 Protein Homology CDS 64214 65563 . + 0 ID=cds-WP_059535635.1;Parent=gene-LDO45_RS25640;Dbxref=GenBank:WP_059535635.1;Name=WP_059535635.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041492724.1;locus_tag=LDO45_RS25640;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_059535635.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 65560 66213 . + . ID=gene-LDO45_RS25645;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=LDO45_RS25645;old_locus_tag=BDI4_60078 NZ_CAJZAS010000216.1 Protein Homology CDS 65560 66213 . + 0 ID=cds-WP_006751807.1;Parent=gene-LDO45_RS25645;Dbxref=GenBank:WP_006751807.1;Name=WP_006751807.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751807.1;locus_tag=LDO45_RS25645;product=ATP phosphoribosyltransferase;protein_id=WP_006751807.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 66238 67554 . + . ID=gene-LDO45_RS25650;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=LDO45_RS25650;old_locus_tag=BDI4_60079 NZ_CAJZAS010000216.1 Protein Homology CDS 66238 67554 . + 0 ID=cds-WP_223964423.1;Parent=gene-LDO45_RS25650;Dbxref=GenBank:WP_223964423.1;Name=WP_223964423.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327781.1;locus_tag=LDO45_RS25650;product=histidinol dehydrogenase;protein_id=WP_223964423.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 67674 68747 . + . ID=gene-LDO45_RS25655;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=LDO45_RS25655;old_locus_tag=BDI4_60080 NZ_CAJZAS010000216.1 Protein Homology CDS 67674 68747 . + 0 ID=cds-WP_059535638.1;Parent=gene-LDO45_RS25655;Dbxref=GenBank:WP_059535638.1;Name=WP_059535638.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751805.1;locus_tag=LDO45_RS25655;product=histidinol-phosphate transaminase;protein_id=WP_059535638.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 68813 69400 . + . ID=gene-LDO45_RS25660;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=LDO45_RS25660;old_locus_tag=BDI4_60081 NZ_CAJZAS010000216.1 Protein Homology CDS 68813 69400 . + 0 ID=cds-WP_006751804.1;Parent=gene-LDO45_RS25660;Dbxref=GenBank:WP_006751804.1;Name=WP_006751804.1;Ontology_term=GO:0000105,GO:0004424;gbkey=CDS;gene=hisB;go_function=imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400582.1;locus_tag=LDO45_RS25660;product=imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_006751804.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 69462 70082 . + . ID=gene-LDO45_RS25665;Name=LDO45_RS25665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25665;old_locus_tag=BDI4_60082 NZ_CAJZAS010000216.1 Protein Homology CDS 69462 70082 . + 0 ID=cds-WP_059535640.1;Parent=gene-LDO45_RS25665;Dbxref=GenBank:WP_059535640.1;Name=WP_059535640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092886.1;locus_tag=LDO45_RS25665;product=MarC family protein;protein_id=WP_059535640.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 70079 70720 . + . ID=gene-LDO45_RS25670;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=LDO45_RS25670;old_locus_tag=BDI4_60083 NZ_CAJZAS010000216.1 Protein Homology CDS 70079 70720 . + 0 ID=cds-WP_059535642.1;Parent=gene-LDO45_RS25670;Dbxref=GenBank:WP_059535642.1;Name=WP_059535642.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180210.1;locus_tag=LDO45_RS25670;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_059535642.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 70896 71651 . + . ID=gene-LDO45_RS25675;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=LDO45_RS25675;old_locus_tag=BDI4_60084 NZ_CAJZAS010000216.1 Protein Homology CDS 70896 71651 . + 0 ID=cds-WP_223964424.1;Parent=gene-LDO45_RS25675;Dbxref=GenBank:WP_223964424.1;Name=WP_223964424.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883057.1;locus_tag=LDO45_RS25675;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_223964424.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 71758 72531 . + . ID=gene-LDO45_RS25680;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=LDO45_RS25680;old_locus_tag=BDI4_60085 NZ_CAJZAS010000216.1 Protein Homology CDS 71758 72531 . + 0 ID=cds-WP_059535646.1;Parent=gene-LDO45_RS25680;Dbxref=GenBank:WP_059535646.1;Name=WP_059535646.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362933.1;locus_tag=LDO45_RS25680;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_059535646.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 72531 72944 . + . ID=gene-LDO45_RS25685;Name=hisI;gbkey=Gene;gene=hisI;gene_biotype=protein_coding;locus_tag=LDO45_RS25685;old_locus_tag=BDI4_60086 NZ_CAJZAS010000216.1 Protein Homology CDS 72531 72944 . + 0 ID=cds-WP_059692364.1;Parent=gene-LDO45_RS25685;Dbxref=GenBank:WP_059692364.1;Name=WP_059692364.1;Ontology_term=GO:0000105,GO:0004635;gbkey=CDS;gene=hisI;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494429.1;locus_tag=LDO45_RS25685;product=phosphoribosyl-AMP cyclohydrolase;protein_id=WP_059692364.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 72941 73306 . + . ID=gene-LDO45_RS25690;Name=LDO45_RS25690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25690;old_locus_tag=BDI4_60087 NZ_CAJZAS010000216.1 Protein Homology CDS 72941 73306 . + 0 ID=cds-WP_223964426.1;Parent=gene-LDO45_RS25690;Dbxref=GenBank:WP_223964426.1;Name=WP_223964426.1;Ontology_term=GO:0000105,GO:0004636;gbkey=CDS;go_function=phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883060.1;locus_tag=LDO45_RS25690;product=phosphoribosyl-ATP diphosphatase;protein_id=WP_223964426.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 73378 73770 . + . ID=gene-LDO45_RS25695;Name=LDO45_RS25695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25695;old_locus_tag=BDI4_60088 NZ_CAJZAS010000216.1 Protein Homology CDS 73378 73770 . + 0 ID=cds-WP_059449807.1;Parent=gene-LDO45_RS25695;Dbxref=GenBank:WP_059449807.1;Name=WP_059449807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199903.1;locus_tag=LDO45_RS25695;product=hypothetical protein;protein_id=WP_059449807.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 73800 74165 . + . ID=gene-LDO45_RS25700;Name=LDO45_RS25700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25700;old_locus_tag=BDI4_60089 NZ_CAJZAS010000216.1 Protein Homology CDS 73800 74165 . + 0 ID=cds-WP_044845951.1;Parent=gene-LDO45_RS25700;Dbxref=GenBank:WP_044845951.1;Name=WP_044845951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185206.1;locus_tag=LDO45_RS25700;product=histidine triad nucleotide-binding protein;protein_id=WP_044845951.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 74259 74489 . + . ID=gene-LDO45_RS25705;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=LDO45_RS25705;old_locus_tag=BDI4_60090 NZ_CAJZAS010000216.1 Protein Homology CDS 74259 74489 . + 0 ID=cds-WP_034183658.1;Parent=gene-LDO45_RS25705;Dbxref=GenBank:WP_034183658.1;Name=WP_034183658.1;Ontology_term=GO:0043953,GO:0016020;gbkey=CDS;gene=tatA;go_component=membrane|0016020||IEA;go_process=protein transport by the Tat complex|0043953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477115.1;locus_tag=LDO45_RS25705;product=Sec-independent protein translocase subunit TatA;protein_id=WP_034183658.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 74516 75046 . + . ID=gene-LDO45_RS25710;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=LDO45_RS25710;old_locus_tag=BDI4_60091 NZ_CAJZAS010000216.1 Protein Homology CDS 74516 75046 . + 0 ID=cds-WP_124501185.1;Parent=gene-LDO45_RS25710;Dbxref=GenBank:WP_124501185.1;Name=WP_124501185.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477114.1;locus_tag=LDO45_RS25710;product=Sec-independent protein translocase protein TatB;protein_id=WP_124501185.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 75088 75870 . + . ID=gene-LDO45_RS25715;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=LDO45_RS25715;old_locus_tag=BDI4_60092 NZ_CAJZAS010000216.1 Protein Homology CDS 75088 75870 . + 0 ID=cds-WP_044845948.1;Parent=gene-LDO45_RS25715;Dbxref=GenBank:WP_044845948.1;Name=WP_044845948.1;Ontology_term=GO:0015628,GO:0005886;gbkey=CDS;gene=tatC;go_component=plasma membrane|0005886||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009888550.1;locus_tag=LDO45_RS25715;product=twin-arginine translocase subunit TatC;protein_id=WP_044845948.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 76097 77302 . - . ID=gene-LDO45_RS25720;Name=LDO45_RS25720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25720;old_locus_tag=BDI4_60093 NZ_CAJZAS010000216.1 Protein Homology CDS 76097 77302 . - 0 ID=cds-WP_059535654.1;Parent=gene-LDO45_RS25720;Dbxref=GenBank:WP_059535654.1;Name=WP_059535654.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751792.1;locus_tag=LDO45_RS25720;product=Do family serine endopeptidase;protein_id=WP_059535654.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 77324 78070 . + . ID=gene-LDO45_RS25725;Name=LDO45_RS25725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25725;old_locus_tag=BDI4_60094 NZ_CAJZAS010000216.1 Protein Homology CDS 77324 78070 . + 0 ID=cds-WP_059535656.1;Parent=gene-LDO45_RS25725;Dbxref=GenBank:WP_059535656.1;Name=WP_059535656.1;Ontology_term=GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906350.1;locus_tag=LDO45_RS25725;product=Nif3-like dinuclear metal center hexameric protein;protein_id=WP_059535656.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 78289 78909 . + . ID=gene-LDO45_RS25730;Name=petA;gbkey=Gene;gene=petA;gene_biotype=protein_coding;locus_tag=LDO45_RS25730;old_locus_tag=BDI4_60095 NZ_CAJZAS010000216.1 Protein Homology CDS 78289 78909 . + 0 ID=cds-WP_059535658.1;Parent=gene-LDO45_RS25730;Dbxref=GenBank:WP_059535658.1;Name=WP_059535658.1;Ontology_term=GO:0009060,GO:0008121,GO:0009055,GO:0045275;gbkey=CDS;gene=petA;go_component=respiratory chain complex III|0045275||IEA;go_function=ubiquinol-cytochrome-c reductase activity|0008121||IEA,electron transfer activity|0009055||IEA;go_process=aerobic respiration|0009060||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491868.1;locus_tag=LDO45_RS25730;product=ubiquinol-cytochrome c reductase iron-sulfur subunit;protein_id=WP_059535658.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 78909 80291 . + . ID=gene-LDO45_RS25735;Name=LDO45_RS25735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25735;old_locus_tag=BDI4_60096 NZ_CAJZAS010000216.1 Protein Homology CDS 78909 80291 . + 0 ID=cds-WP_059535660.1;Parent=gene-LDO45_RS25735;Dbxref=GenBank:WP_059535660.1;Name=WP_059535660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199894.1;locus_tag=LDO45_RS25735;product=cytochrome bc complex cytochrome b subunit;protein_id=WP_059535660.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 80313 81071 . + . ID=gene-LDO45_RS25740;Name=LDO45_RS25740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25740;old_locus_tag=BDI4_60097 NZ_CAJZAS010000216.1 Protein Homology CDS 80313 81071 . + 0 ID=cds-WP_059535662.1;Parent=gene-LDO45_RS25740;Dbxref=GenBank:WP_059535662.1;Name=WP_059535662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004199892.1;locus_tag=LDO45_RS25740;product=cytochrome c1;protein_id=WP_059535662.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 81166 81777 . + . ID=gene-LDO45_RS25745;Name=LDO45_RS25745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25745;old_locus_tag=BDI4_60098 NZ_CAJZAS010000216.1 Protein Homology CDS 81166 81777 . + 0 ID=cds-WP_006400565.1;Parent=gene-LDO45_RS25745;Dbxref=GenBank:WP_006400565.1;Name=WP_006400565.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006999756.1;locus_tag=LDO45_RS25745;product=glutathione S-transferase N-terminal domain-containing protein;protein_id=WP_006400565.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 81848 82369 . + . ID=gene-LDO45_RS25750;Name=LDO45_RS25750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25750;old_locus_tag=BDI4_60099 NZ_CAJZAS010000216.1 Protein Homology CDS 81848 82369 . + 0 ID=cds-WP_059535664.1;Parent=gene-LDO45_RS25750;Dbxref=GenBank:WP_059535664.1;Name=WP_059535664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412425.1;locus_tag=LDO45_RS25750;product=ClpXP protease specificity-enhancing factor;protein_id=WP_059535664.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 82389 82464 . + . ID=gene-LDO45_RS25755;Name=LDO45_RS25755;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS25755;old_locus_tag=BDI4_TRNA4 NZ_CAJZAS010000216.1 tRNAscan-SE tRNA 82389 82464 . + . ID=rna-LDO45_RS25755;Parent=gene-LDO45_RS25755;anticodon=(pos:82422..82424);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS25755;product=tRNA-Thr NZ_CAJZAS010000216.1 tRNAscan-SE exon 82389 82464 . + . ID=exon-LDO45_RS25755-1;Parent=rna-LDO45_RS25755;anticodon=(pos:82422..82424);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS25755;product=tRNA-Thr NZ_CAJZAS010000216.1 RefSeq gene 82540 83073 . - . ID=gene-LDO45_RS25760;Name=LDO45_RS25760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25760;old_locus_tag=BDI4_60100 NZ_CAJZAS010000216.1 Protein Homology CDS 82540 83073 . - 0 ID=cds-WP_223964428.1;Parent=gene-LDO45_RS25760;Dbxref=GenBank:WP_223964428.1;Name=WP_223964428.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF012798.5;locus_tag=LDO45_RS25760;product=tyrosine-type recombinase/integrase;protein_id=WP_223964428.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 83057 83341 . + . ID=gene-LDO45_RS25765;Name=LDO45_RS25765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25765;old_locus_tag=BDI4_60101 NZ_CAJZAS010000216.1 GeneMarkS-2+ CDS 83057 83341 . + 0 ID=cds-WP_223964437.1;Parent=gene-LDO45_RS25765;Dbxref=GenBank:WP_223964437.1;Name=WP_223964437.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS25765;product=hypothetical protein;protein_id=WP_223964437.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 83355 83792 . + . ID=gene-LDO45_RS25770;Name=LDO45_RS25770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25770;old_locus_tag=BDI4_60102 NZ_CAJZAS010000216.1 Protein Homology CDS 83355 83792 . + 0 ID=cds-WP_223964440.1;Parent=gene-LDO45_RS25770;Dbxref=GenBank:WP_223964440.1;Name=WP_223964440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401801.1;locus_tag=LDO45_RS25770;product=phage tail protein;protein_id=WP_223964440.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq pseudogene 83681 84442 . + . ID=gene-LDO45_RS25775;Name=LDO45_RS25775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS25775;old_locus_tag=BDI4_60103;partial=true;pseudo=true;start_range=.,83681 NZ_CAJZAS010000216.1 Protein Homology CDS 83681 84442 . + 0 ID=cds-LDO45_RS25775;Parent=gene-LDO45_RS25775;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217411.1;locus_tag=LDO45_RS25775;partial=true;product=phage portal protein;pseudo=true;start_range=.,83681;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 84959 85480 . + . ID=gene-LDO45_RS25780;Name=LDO45_RS25780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25780;old_locus_tag=BDI4_60105 NZ_CAJZAS010000216.1 GeneMarkS-2+ CDS 84959 85480 . + 0 ID=cds-WP_223964441.1;Parent=gene-LDO45_RS25780;Dbxref=GenBank:WP_223964441.1;Name=WP_223964441.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS25780;product=hypothetical protein;protein_id=WP_223964441.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq pseudogene 85488 85607 . + . ID=gene-LDO45_RS25785;Name=LDO45_RS25785;end_range=85607,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS25785;partial=true;pseudo=true;start_range=.,85488 NZ_CAJZAS010000216.1 Protein Homology CDS 85488 85607 . + 0 ID=cds-LDO45_RS25785;Parent=gene-LDO45_RS25785;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=85607,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004556602.1;locus_tag=LDO45_RS25785;partial=true;product=capsid portal protein;pseudo=true;start_range=.,85488;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 85669 86208 . - . ID=gene-LDO45_RS25790;Name=LDO45_RS25790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25790;old_locus_tag=BDI4_60106 NZ_CAJZAS010000216.1 GeneMarkS-2+ CDS 85669 86208 . - 0 ID=cds-WP_223964442.1;Parent=gene-LDO45_RS25790;Dbxref=GenBank:WP_223964442.1;Name=WP_223964442.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS25790;product=RIP homotypic interaction motif-containing protein;protein_id=WP_223964442.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 86799 88181 . - . ID=gene-LDO45_RS25795;Name=LDO45_RS25795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25795;old_locus_tag=BDI4_60107 NZ_CAJZAS010000216.1 Protein Homology CDS 86799 88181 . - 0 ID=cds-WP_223964443.1;Parent=gene-LDO45_RS25795;Dbxref=GenBank:WP_223964443.1;Name=WP_223964443.1;Ontology_term=GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF014069.5;locus_tag=LDO45_RS25795;product=HD domain-containing protein;protein_id=WP_223964443.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 88323 88805 . - . ID=gene-LDO45_RS25800;Name=LDO45_RS25800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25800;old_locus_tag=BDI4_60108 NZ_CAJZAS010000216.1 GeneMarkS-2+ CDS 88323 88805 . - 0 ID=cds-WP_223964444.1;Parent=gene-LDO45_RS25800;Dbxref=GenBank:WP_223964444.1;Name=WP_223964444.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS25800;product=hypothetical protein;protein_id=WP_223964444.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 89924 90355 . + . ID=gene-LDO45_RS25805;Name=LDO45_RS25805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25805 NZ_CAJZAS010000216.1 GeneMarkS-2+ CDS 89924 90355 . + 0 ID=cds-WP_223964445.1;Parent=gene-LDO45_RS25805;Dbxref=GenBank:WP_223964445.1;Name=WP_223964445.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS25805;product=hypothetical protein;protein_id=WP_223964445.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 90560 90763 . + . ID=gene-LDO45_RS25810;Name=LDO45_RS25810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25810;old_locus_tag=BDI4_60114 NZ_CAJZAS010000216.1 Protein Homology CDS 90560 90763 . + 0 ID=cds-WP_059535665.1;Parent=gene-LDO45_RS25810;Dbxref=GenBank:WP_059535665.1;Name=WP_059535665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485326.1;locus_tag=LDO45_RS25810;product=hypothetical protein;protein_id=WP_059535665.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 90845 91645 . - . ID=gene-LDO45_RS25815;Name=LDO45_RS25815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25815;old_locus_tag=BDI4_60115 NZ_CAJZAS010000216.1 Protein Homology CDS 90845 91645 . - 0 ID=cds-WP_223964452.1;Parent=gene-LDO45_RS25815;Dbxref=GenBank:WP_223964452.1;Name=WP_223964452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765337.1;locus_tag=LDO45_RS25815;product=cystine ABC transporter substrate-binding protein;protein_id=WP_223964452.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 91983 95162 . + . ID=gene-LDO45_RS25820;Name=tssI;gbkey=Gene;gene=tssI;gene_biotype=protein_coding;locus_tag=LDO45_RS25820;old_locus_tag=BDI4_60116 NZ_CAJZAS010000216.1 Protein Homology CDS 91983 95162 . + 0 ID=cds-WP_223964454.1;Parent=gene-LDO45_RS25820;Dbxref=GenBank:WP_223964454.1;Name=WP_223964454.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssI;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350750.1;locus_tag=LDO45_RS25820;product=type VI secretion system Vgr family protein;protein_id=WP_223964454.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 95198 99796 . + . ID=gene-LDO45_RS25825;Name=LDO45_RS25825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25825;old_locus_tag=BDI4_60117 NZ_CAJZAS010000216.1 Protein Homology CDS 95198 99796 . + 0 ID=cds-WP_374109552.1;Parent=gene-LDO45_RS25825;Dbxref=GenBank:WP_374109552.1;Name=WP_374109552.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327791.1;locus_tag=LDO45_RS25825;product=RHS repeat-associated core domain-containing protein;protein_id=WP_374109552.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 99765 100268 . + . ID=gene-LDO45_RS25830;Name=LDO45_RS25830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25830;old_locus_tag=BDI4_60118 NZ_CAJZAS010000216.1 GeneMarkS-2+ CDS 99765 100268 . + 0 ID=cds-WP_223964458.1;Parent=gene-LDO45_RS25830;Dbxref=GenBank:WP_223964458.1;Name=WP_223964458.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS25830;product=hypothetical protein;protein_id=WP_223964458.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 100454 101038 . + . ID=gene-LDO45_RS25835;Name=LDO45_RS25835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25835;old_locus_tag=BDI4_60119 NZ_CAJZAS010000216.1 GeneMarkS-2+ CDS 100454 101038 . + 0 ID=cds-WP_156437288.1;Parent=gene-LDO45_RS25835;Dbxref=GenBank:WP_156437288.1;Name=WP_156437288.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS25835;product=hypothetical protein;protein_id=WP_156437288.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 101251 101577 . + . ID=gene-LDO45_RS25840;Name=LDO45_RS25840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25840;old_locus_tag=BDI4_60120 NZ_CAJZAS010000216.1 Protein Homology CDS 101251 101577 . + 0 ID=cds-WP_223964460.1;Parent=gene-LDO45_RS25840;Dbxref=GenBank:WP_223964460.1;Name=WP_223964460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546583.1;locus_tag=LDO45_RS25840;product=hypothetical protein;protein_id=WP_223964460.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 101672 102454 . - . ID=gene-LDO45_RS25845;Name=icmH;gbkey=Gene;gene=icmH;gene_biotype=protein_coding;locus_tag=LDO45_RS25845;old_locus_tag=BDI4_60121 NZ_CAJZAS010000216.1 Protein Homology CDS 101672 102454 . - 0 ID=cds-WP_059532829.1;Parent=gene-LDO45_RS25845;Dbxref=GenBank:WP_059532829.1;Name=WP_059532829.1;gbkey=CDS;gene=icmH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106837.1;locus_tag=LDO45_RS25845;product=type IVB secretion system protein IcmH/DotU;protein_id=WP_059532829.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 102451 103797 . - . ID=gene-LDO45_RS25850;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=LDO45_RS25850;old_locus_tag=BDI4_60122 NZ_CAJZAS010000216.1 Protein Homology CDS 102451 103797 . - 0 ID=cds-WP_059532826.1;Parent=gene-LDO45_RS25850;Dbxref=GenBank:WP_059532826.1;Name=WP_059532826.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409507.1;locus_tag=LDO45_RS25850;product=type VI secretion system baseplate subunit TssK;protein_id=WP_059532826.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 103901 104512 . - . ID=gene-LDO45_RS25855;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=LDO45_RS25855;old_locus_tag=BDI4_60123 NZ_CAJZAS010000216.1 Protein Homology CDS 103901 104512 . - 0 ID=cds-WP_059532823.1;Parent=gene-LDO45_RS25855;Dbxref=GenBank:WP_059532823.1;Name=WP_059532823.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214251.1;locus_tag=LDO45_RS25855;product=type VI secretion system lipoprotein TssJ;protein_id=WP_059532823.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 104890 105522 . + . ID=gene-LDO45_RS25860;Name=LDO45_RS25860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25860;old_locus_tag=BDI4_60125 NZ_CAJZAS010000216.1 Protein Homology CDS 104890 105522 . + 0 ID=cds-WP_059532820.1;Parent=gene-LDO45_RS25860;Dbxref=GenBank:WP_059532820.1;Name=WP_059532820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883103.1;locus_tag=LDO45_RS25860;product=M48 family metallopeptidase;protein_id=WP_059532820.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 105567 106082 . + . ID=gene-LDO45_RS25865;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=LDO45_RS25865;old_locus_tag=BDI4_60126 NZ_CAJZAS010000216.1 Protein Homology CDS 105567 106082 . + 0 ID=cds-WP_044845930.1;Parent=gene-LDO45_RS25865;Dbxref=GenBank:WP_044845930.1;Name=WP_044845930.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010106779.1;locus_tag=LDO45_RS25865;product=type VI secretion system contractile sheath small subunit;protein_id=WP_044845930.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 106098 107588 . + . ID=gene-LDO45_RS25870;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=LDO45_RS25870;old_locus_tag=BDI4_60127 NZ_CAJZAS010000216.1 Protein Homology CDS 106098 107588 . + 0 ID=cds-WP_039320274.1;Parent=gene-LDO45_RS25870;Dbxref=GenBank:WP_039320274.1;Name=WP_039320274.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012426790.1;locus_tag=LDO45_RS25870;product=type VI secretion system contractile sheath large subunit;protein_id=WP_039320274.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 107659 108162 . + . ID=gene-LDO45_RS25875;Name=LDO45_RS25875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25875;old_locus_tag=BDI4_60128 NZ_CAJZAS010000216.1 Protein Homology CDS 107659 108162 . + 0 ID=cds-WP_006477093.1;Parent=gene-LDO45_RS25875;Dbxref=GenBank:WP_006477093.1;Name=WP_006477093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883106.1;locus_tag=LDO45_RS25875;product=type VI secretion system tube protein Hcp;protein_id=WP_006477093.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 108327 108812 . + . ID=gene-LDO45_RS25880;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=LDO45_RS25880;old_locus_tag=BDI4_60129 NZ_CAJZAS010000216.1 Protein Homology CDS 108327 108812 . + 0 ID=cds-WP_059465243.1;Parent=gene-LDO45_RS25880;Dbxref=GenBank:WP_059465243.1;Name=WP_059465243.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757140.1;locus_tag=LDO45_RS25880;product=type VI secretion system baseplate subunit TssE;protein_id=WP_059465243.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 108892 110727 . + . ID=gene-LDO45_RS25885;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LDO45_RS25885;old_locus_tag=BDI4_60130 NZ_CAJZAS010000216.1 Protein Homology CDS 108892 110727 . + 0 ID=cds-WP_059532816.1;Parent=gene-LDO45_RS25885;Dbxref=GenBank:WP_059532816.1;Name=WP_059532816.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484396.1;locus_tag=LDO45_RS25885;product=type VI secretion system baseplate subunit TssF;protein_id=WP_059532816.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 110691 111791 . + . ID=gene-LDO45_RS25890;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=LDO45_RS25890;old_locus_tag=BDI4_60131 NZ_CAJZAS010000216.1 Protein Homology CDS 110691 111791 . + 0 ID=cds-WP_223964462.1;Parent=gene-LDO45_RS25890;Dbxref=GenBank:WP_223964462.1;Name=WP_223964462.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010096521.1;locus_tag=LDO45_RS25890;product=type VI secretion system baseplate subunit TssG;protein_id=WP_223964462.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 111836 114505 . + . ID=gene-LDO45_RS25895;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=LDO45_RS25895;old_locus_tag=BDI4_60132 NZ_CAJZAS010000216.1 Protein Homology CDS 111836 114505 . + 0 ID=cds-WP_223964464.1;Parent=gene-LDO45_RS25895;Dbxref=GenBank:WP_223964464.1;Name=WP_223964464.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009967199.1;locus_tag=LDO45_RS25895;product=type VI secretion system ATPase TssH;protein_id=WP_223964464.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 114549 115670 . + . ID=gene-LDO45_RS25900;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=LDO45_RS25900;old_locus_tag=BDI4_60133 NZ_CAJZAS010000216.1 Protein Homology CDS 114549 115670 . + 0 ID=cds-WP_059532808.1;Parent=gene-LDO45_RS25900;Dbxref=GenBank:WP_059532808.1;Name=WP_059532808.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350763.1;locus_tag=LDO45_RS25900;product=type VI secretion system protein TssA;protein_id=WP_059532808.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 115736 118417 . + . ID=gene-LDO45_RS25905;Name=LDO45_RS25905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25905;old_locus_tag=BDI4_60134 NZ_CAJZAS010000216.1 Protein Homology CDS 115736 118417 . + 0 ID=cds-WP_223964466.1;Parent=gene-LDO45_RS25905;Dbxref=GenBank:WP_223964466.1;Name=WP_223964466.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350764.1;locus_tag=LDO45_RS25905;product=type VI secretion system Vgr family protein;protein_id=WP_223964466.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 118420 119832 . + . ID=gene-LDO45_RS25910;Name=LDO45_RS25910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25910;old_locus_tag=BDI4_60135 NZ_CAJZAS010000216.1 GeneMarkS-2+ CDS 118420 119832 . + 0 ID=cds-WP_223964468.1;Parent=gene-LDO45_RS25910;Dbxref=GenBank:WP_223964468.1;Name=WP_223964468.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS25910;product=hypothetical protein;protein_id=WP_223964468.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 119829 120605 . + . ID=gene-LDO45_RS25915;Name=LDO45_RS25915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25915;old_locus_tag=BDI4_60136 NZ_CAJZAS010000216.1 GeneMarkS-2+ CDS 119829 120605 . + 0 ID=cds-WP_223964470.1;Parent=gene-LDO45_RS25915;Dbxref=GenBank:WP_223964470.1;Name=WP_223964470.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS25915;product=hypothetical protein;protein_id=WP_223964470.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 120733 121494 . + . ID=gene-LDO45_RS25920;Name=LDO45_RS25920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25920;old_locus_tag=BDI4_60137 NZ_CAJZAS010000216.1 Protein Homology CDS 120733 121494 . + 0 ID=cds-WP_223964472.1;Parent=gene-LDO45_RS25920;Dbxref=GenBank:WP_223964472.1;Name=WP_223964472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006412383.1;locus_tag=LDO45_RS25920;product=hypothetical protein;protein_id=WP_223964472.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 121656 122606 . - . ID=gene-LDO45_RS25925;Name=LDO45_RS25925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25925;old_locus_tag=BDI4_60138 NZ_CAJZAS010000216.1 Protein Homology CDS 121656 122606 . - 0 ID=cds-WP_223964473.1;Parent=gene-LDO45_RS25925;Dbxref=GenBank:WP_223964473.1;Name=WP_223964473.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757145.1;locus_tag=LDO45_RS25925;product=OmpA family protein;protein_id=WP_223964473.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 122611 123600 . - . ID=gene-LDO45_RS25930;Name=tagF;gbkey=Gene;gene=tagF;gene_biotype=protein_coding;locus_tag=LDO45_RS25930;old_locus_tag=BDI4_60139 NZ_CAJZAS010000216.1 Protein Homology CDS 122611 123600 . - 0 ID=cds-WP_059607872.1;Parent=gene-LDO45_RS25930;Dbxref=GenBank:WP_059607872.1;Name=WP_059607872.1;gbkey=CDS;gene=tagF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483243.1;locus_tag=LDO45_RS25930;product=type VI secretion system-associated protein TagF;protein_id=WP_059607872.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 123597 127574 . - . ID=gene-LDO45_RS25935;Name=tssM;gbkey=Gene;gene=tssM;gene_biotype=protein_coding;locus_tag=LDO45_RS25935;old_locus_tag=BDI4_60140 NZ_CAJZAS010000216.1 Protein Homology CDS 123597 127574 . - 0 ID=cds-WP_223964475.1;Parent=gene-LDO45_RS25935;Dbxref=GenBank:WP_223964475.1;Name=WP_223964475.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssM;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655832.1;locus_tag=LDO45_RS25935;product=type VI secretion system membrane subunit TssM;protein_id=WP_223964475.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq gene 127876 128721 . - . ID=gene-LDO45_RS25940;Name=LDO45_RS25940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25940;old_locus_tag=BDI4_60141 NZ_CAJZAS010000216.1 Protein Homology CDS 127876 128721 . - 0 ID=cds-WP_059532780.1;Parent=gene-LDO45_RS25940;Dbxref=GenBank:WP_059532780.1;Name=WP_059532780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898247.1;locus_tag=LDO45_RS25940;product=M15 family metallopeptidase;protein_id=WP_059532780.1;transl_table=11 NZ_CAJZAS010000216.1 RefSeq pseudogene 128843 129157 . + . ID=gene-LDO45_RS25945;Name=LDO45_RS25945;end_range=129157,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS25945;partial=true;pseudo=true NZ_CAJZAS010000216.1 Protein Homology CDS 128843 129157 . + 0 ID=cds-LDO45_RS25945;Parent=gene-LDO45_RS25945;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=129157,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494415.1;locus_tag=LDO45_RS25945;partial=true;product=phage tail protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000217.1 1 87036 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000217.1 RefSeq region 1 87036 . + . ID=NZ_CAJZAS010000217.1:1..87036;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_60 NZ_CAJZAS010000217.1 RefSeq gene 1 976 . - . ID=gene-LDO45_RS25950;Name=LDO45_RS25950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25950;partial=true;start_range=.,1 NZ_CAJZAS010000217.1 Protein Homology CDS 1 976 . - 0 ID=cds-WP_223964483.1;Parent=gene-LDO45_RS25950;Dbxref=GenBank:WP_223964483.1;Name=WP_223964483.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335522.1;locus_tag=LDO45_RS25950;partial=true;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_223964483.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 1155 1931 . + . ID=gene-LDO45_RS25955;Name=LDO45_RS25955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25955;old_locus_tag=BDI4_600002 NZ_CAJZAS010000217.1 Protein Homology CDS 1155 1931 . + 0 ID=cds-WP_059533114.1;Parent=gene-LDO45_RS25955;Dbxref=GenBank:WP_059533114.1;Name=WP_059533114.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602148.1;locus_tag=LDO45_RS25955;product=SDR family oxidoreductase;protein_id=WP_059533114.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 1964 2395 . + . ID=gene-LDO45_RS25960;Name=LDO45_RS25960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25960;old_locus_tag=BDI4_600003 NZ_CAJZAS010000217.1 Protein Homology CDS 1964 2395 . + 0 ID=cds-WP_223964485.1;Parent=gene-LDO45_RS25960;Dbxref=GenBank:WP_223964485.1;Name=WP_223964485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762665.1;locus_tag=LDO45_RS25960;product=thioesterase family protein;protein_id=WP_223964485.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 2501 3046 . - . ID=gene-LDO45_RS25965;Name=LDO45_RS25965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25965;old_locus_tag=BDI4_600004 NZ_CAJZAS010000217.1 Protein Homology CDS 2501 3046 . - 0 ID=cds-WP_059447349.1;Parent=gene-LDO45_RS25965;Dbxref=GenBank:WP_059447349.1;Name=WP_059447349.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026504.1;locus_tag=LDO45_RS25965;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_059447349.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 3270 3974 . + . ID=gene-LDO45_RS25970;Name=LDO45_RS25970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25970;old_locus_tag=BDI4_600005 NZ_CAJZAS010000217.1 Protein Homology CDS 3270 3974 . + 0 ID=cds-WP_223964487.1;Parent=gene-LDO45_RS25970;Dbxref=GenBank:WP_223964487.1;Name=WP_223964487.1;Ontology_term=GO:0008410;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891596.1;locus_tag=LDO45_RS25970;product=CoA transferase subunit A;protein_id=WP_223964487.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 3976 4617 . + . ID=gene-LDO45_RS25975;Name=LDO45_RS25975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25975;old_locus_tag=BDI4_600006 NZ_CAJZAS010000217.1 Protein Homology CDS 3976 4617 . + 0 ID=cds-WP_223964489.1;Parent=gene-LDO45_RS25975;Dbxref=GenBank:WP_223964489.1;Name=WP_223964489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402088.1;locus_tag=LDO45_RS25975;product=CoA transferase subunit B;protein_id=WP_223964489.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 4696 5409 . - . ID=gene-LDO45_RS25980;Name=LDO45_RS25980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25980;old_locus_tag=BDI4_600007 NZ_CAJZAS010000217.1 Protein Homology CDS 4696 5409 . - 0 ID=cds-WP_223964491.1;Parent=gene-LDO45_RS25980;Dbxref=GenBank:WP_223964491.1;Name=WP_223964491.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884537.1;locus_tag=LDO45_RS25980;product=SDR family oxidoreductase;protein_id=WP_223964491.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 5448 6458 . - . ID=gene-LDO45_RS25985;Name=LDO45_RS25985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25985;old_locus_tag=BDI4_600008 NZ_CAJZAS010000217.1 Protein Homology CDS 5448 6458 . - 0 ID=cds-WP_223964493.1;Parent=gene-LDO45_RS25985;Dbxref=GenBank:WP_223964493.1;Name=WP_223964493.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891587.1;locus_tag=LDO45_RS25985;product=polysaccharide deacetylase family protein;protein_id=WP_223964493.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 6470 7027 . - . ID=gene-LDO45_RS25990;Name=LDO45_RS25990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25990;old_locus_tag=BDI4_600010 NZ_CAJZAS010000217.1 Protein Homology CDS 6470 7027 . - 0 ID=cds-WP_223964494.1;Parent=gene-LDO45_RS25990;Dbxref=GenBank:WP_223964494.1;Name=WP_223964494.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476192.1;locus_tag=LDO45_RS25990;product=ester cyclase;protein_id=WP_223964494.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 7166 8071 . + . ID=gene-LDO45_RS25995;Name=LDO45_RS25995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS25995;old_locus_tag=BDI4_600009 NZ_CAJZAS010000217.1 Protein Homology CDS 7166 8071 . + 0 ID=cds-WP_223964496.1;Parent=gene-LDO45_RS25995;Dbxref=GenBank:WP_223964496.1;Name=WP_223964496.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884541.1;locus_tag=LDO45_RS25995;product=LysR family transcriptional regulator;protein_id=WP_223964496.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 8203 9099 . + . ID=gene-LDO45_RS26000;Name=LDO45_RS26000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26000;old_locus_tag=BDI4_600012 NZ_CAJZAS010000217.1 Protein Homology CDS 8203 9099 . + 0 ID=cds-WP_223964498.1;Parent=gene-LDO45_RS26000;Dbxref=GenBank:WP_223964498.1;Name=WP_223964498.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492553.1;locus_tag=LDO45_RS26000;product=alpha/beta fold hydrolase;protein_id=WP_223964498.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 9180 9533 . + . ID=gene-LDO45_RS26005;Name=LDO45_RS26005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26005;old_locus_tag=BDI4_600013 NZ_CAJZAS010000217.1 Protein Homology CDS 9180 9533 . + 0 ID=cds-WP_014897238.1;Parent=gene-LDO45_RS26005;Dbxref=GenBank:WP_014897238.1;Name=WP_014897238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486103.1;locus_tag=LDO45_RS26005;product=RidA family protein;protein_id=WP_014897238.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 9573 11807 . + . ID=gene-LDO45_RS26010;Name=LDO45_RS26010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26010;old_locus_tag=BDI4_600014 NZ_CAJZAS010000217.1 Protein Homology CDS 9573 11807 . + 0 ID=cds-WP_059691823.1;Parent=gene-LDO45_RS26010;Dbxref=GenBank:WP_059691823.1;Name=WP_059691823.1;Ontology_term=GO:0015970,GO:0005524,GO:0005525,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545244.1;locus_tag=LDO45_RS26010;product=bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase;protein_id=WP_059691823.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 11904 11980 . + . ID=gene-LDO45_RS26015;Name=LDO45_RS26015;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS26015;old_locus_tag=BDI4_TRNA19 NZ_CAJZAS010000217.1 tRNAscan-SE tRNA 11904 11980 . + . ID=rna-LDO45_RS26015;Parent=gene-LDO45_RS26015;anticodon=(pos:11938..11940);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS26015;product=tRNA-Val NZ_CAJZAS010000217.1 tRNAscan-SE exon 11904 11980 . + . ID=exon-LDO45_RS26015-1;Parent=rna-LDO45_RS26015;anticodon=(pos:11938..11940);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS26015;product=tRNA-Val NZ_CAJZAS010000217.1 RefSeq gene 12252 14159 . + . ID=gene-LDO45_RS26020;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=LDO45_RS26020;old_locus_tag=BDI4_600016 NZ_CAJZAS010000217.1 Protein Homology CDS 12252 14159 . + 0 ID=cds-WP_059691822.1;Parent=gene-LDO45_RS26020;Dbxref=GenBank:WP_059691822.1;Name=WP_059691822.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191232.1;locus_tag=LDO45_RS26020;product=threonine--tRNA ligase;protein_id=WP_059691822.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 14209 14733 . + . ID=gene-LDO45_RS26025;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=LDO45_RS26025;old_locus_tag=BDI4_600018 NZ_CAJZAS010000217.1 Protein Homology CDS 14209 14733 . + 0 ID=cds-WP_071734130.1;Parent=gene-LDO45_RS26025;Dbxref=GenBank:WP_071734130.1;Name=WP_071734130.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012435921.1;locus_tag=LDO45_RS26025;product=translation initiation factor IF-3;protein_id=WP_071734130.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 14924 15121 . + . ID=gene-LDO45_RS26030;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=LDO45_RS26030;old_locus_tag=BDI4_600019 NZ_CAJZAS010000217.1 Protein Homology CDS 14924 15121 . + 0 ID=cds-WP_004191477.1;Parent=gene-LDO45_RS26030;Dbxref=GenBank:WP_004191477.1;Name=WP_004191477.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012433738.1;locus_tag=LDO45_RS26030;product=50S ribosomal protein L35;protein_id=WP_004191477.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 15152 15511 . + . ID=gene-LDO45_RS26035;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=LDO45_RS26035;old_locus_tag=BDI4_600020 NZ_CAJZAS010000217.1 Protein Homology CDS 15152 15511 . + 0 ID=cds-WP_004192938.1;Parent=gene-LDO45_RS26035;Dbxref=GenBank:WP_004192938.1;Name=WP_004192938.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192938.1;locus_tag=LDO45_RS26035;product=50S ribosomal protein L20;protein_id=WP_004192938.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 15660 16673 . + . ID=gene-LDO45_RS26040;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=LDO45_RS26040;old_locus_tag=BDI4_600021 NZ_CAJZAS010000217.1 Protein Homology CDS 15660 16673 . + 0 ID=cds-WP_014897235.1;Parent=gene-LDO45_RS26040;Dbxref=GenBank:WP_014897235.1;Name=WP_014897235.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753318.1;locus_tag=LDO45_RS26040;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_014897235.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 16768 19197 . + . ID=gene-LDO45_RS26045;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=LDO45_RS26045;old_locus_tag=BDI4_600022 NZ_CAJZAS010000217.1 Protein Homology CDS 16768 19197 . + 0 ID=cds-WP_223964500.1;Parent=gene-LDO45_RS26045;Dbxref=GenBank:WP_223964500.1;Name=WP_223964500.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115709.1;locus_tag=LDO45_RS26045;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_223964500.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 19270 19656 . + . ID=gene-LDO45_RS26050;Name=LDO45_RS26050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26050;old_locus_tag=BDI4_600023 NZ_CAJZAS010000217.1 Protein Homology CDS 19270 19656 . + 0 ID=cds-WP_006486093.1;Parent=gene-LDO45_RS26050;Dbxref=GenBank:WP_006486093.1;Name=WP_006486093.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884557.1;locus_tag=LDO45_RS26050;product=integration host factor subunit alpha;protein_id=WP_006486093.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 19718 20131 . + . ID=gene-LDO45_RS26055;Name=LDO45_RS26055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26055;old_locus_tag=BDI4_600024 NZ_CAJZAS010000217.1 Protein Homology CDS 19718 20131 . + 0 ID=cds-WP_059533091.1;Parent=gene-LDO45_RS26055;Dbxref=GenBank:WP_059533091.1;Name=WP_059533091.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526841.1;locus_tag=LDO45_RS26055;product=MerR family transcriptional regulator;protein_id=WP_059533091.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 20210 22420 . - . ID=gene-LDO45_RS26060;Name=LDO45_RS26060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26060;old_locus_tag=BDI4_600025 NZ_CAJZAS010000217.1 Protein Homology CDS 20210 22420 . - 0 ID=cds-WP_223964502.1;Parent=gene-LDO45_RS26060;Dbxref=GenBank:WP_223964502.1;Name=WP_223964502.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363734.1;locus_tag=LDO45_RS26060;product=hypothetical protein;protein_id=WP_223964502.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 22774 23586 . - . ID=gene-LDO45_RS26065;Name=LDO45_RS26065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26065;old_locus_tag=BDI4_600026 NZ_CAJZAS010000217.1 Protein Homology CDS 22774 23586 . - 0 ID=cds-WP_223964638.1;Parent=gene-LDO45_RS26065;Dbxref=GenBank:WP_223964638.1;Name=WP_223964638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897231.1;locus_tag=LDO45_RS26065;product=tyrosine-protein phosphatase;protein_id=WP_223964638.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 23985 24698 . + . ID=gene-LDO45_RS26070;Name=LDO45_RS26070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26070;old_locus_tag=BDI4_600028 NZ_CAJZAS010000217.1 Protein Homology CDS 23985 24698 . + 0 ID=cds-WP_223964504.1;Parent=gene-LDO45_RS26070;Dbxref=GenBank:WP_223964504.1;Name=WP_223964504.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328371.1;locus_tag=LDO45_RS26070;product=methyltransferase domain-containing protein;protein_id=WP_223964504.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 24871 24947 . + . ID=gene-LDO45_RS26075;Name=LDO45_RS26075;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS26075;old_locus_tag=BDI4_TRNA20 NZ_CAJZAS010000217.1 tRNAscan-SE tRNA 24871 24947 . + . ID=rna-LDO45_RS26075;Parent=gene-LDO45_RS26075;anticodon=(pos:24905..24907);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS26075;product=tRNA-Pro NZ_CAJZAS010000217.1 tRNAscan-SE exon 24871 24947 . + . ID=exon-LDO45_RS26075-1;Parent=rna-LDO45_RS26075;anticodon=(pos:24905..24907);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS26075;product=tRNA-Pro NZ_CAJZAS010000217.1 RefSeq gene 25035 26171 . - . ID=gene-LDO45_RS26080;Name=LDO45_RS26080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26080;old_locus_tag=BDI4_600029 NZ_CAJZAS010000217.1 Protein Homology CDS 25035 26171 . - 0 ID=cds-WP_223964506.1;Parent=gene-LDO45_RS26080;Dbxref=GenBank:WP_223964506.1;Name=WP_223964506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013956333.1;locus_tag=LDO45_RS26080;product=tyrosine-type recombinase/integrase;protein_id=WP_223964506.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 26168 26410 . - . ID=gene-LDO45_RS26085;Name=LDO45_RS26085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26085;old_locus_tag=BDI4_600030 NZ_CAJZAS010000217.1 Protein Homology CDS 26168 26410 . - 0 ID=cds-WP_223964508.1;Parent=gene-LDO45_RS26085;Dbxref=GenBank:WP_223964508.1;Name=WP_223964508.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025352.5;locus_tag=LDO45_RS26085;product=DUF4224 domain-containing protein;protein_id=WP_223964508.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 26410 26775 . - . ID=gene-LDO45_RS26090;Name=LDO45_RS26090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26090;old_locus_tag=BDI4_600031 NZ_CAJZAS010000217.1 GeneMarkS-2+ CDS 26410 26775 . - 0 ID=cds-WP_223964510.1;Parent=gene-LDO45_RS26090;Dbxref=GenBank:WP_223964510.1;Name=WP_223964510.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26090;product=hypothetical protein;protein_id=WP_223964510.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 26778 27026 . - . ID=gene-LDO45_RS26095;Name=LDO45_RS26095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26095;old_locus_tag=BDI4_600032 NZ_CAJZAS010000217.1 GeneMarkS-2+ CDS 26778 27026 . - 0 ID=cds-WP_223964512.1;Parent=gene-LDO45_RS26095;Dbxref=GenBank:WP_223964512.1;Name=WP_223964512.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26095;product=hypothetical protein;protein_id=WP_223964512.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 27062 27286 . + . ID=gene-LDO45_RS26100;Name=LDO45_RS26100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26100;old_locus_tag=BDI4_600034 NZ_CAJZAS010000217.1 GeneMarkS-2+ CDS 27062 27286 . + 0 ID=cds-WP_223964514.1;Parent=gene-LDO45_RS26100;Dbxref=GenBank:WP_223964514.1;Name=WP_223964514.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26100;product=hypothetical protein;protein_id=WP_223964514.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 27346 27609 . - . ID=gene-LDO45_RS26105;Name=LDO45_RS26105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26105;old_locus_tag=BDI4_600035 NZ_CAJZAS010000217.1 GeneMarkS-2+ CDS 27346 27609 . - 0 ID=cds-WP_223964516.1;Parent=gene-LDO45_RS26105;Dbxref=GenBank:WP_223964516.1;Name=WP_223964516.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26105;product=hypothetical protein;protein_id=WP_223964516.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 27606 28376 . - . ID=gene-LDO45_RS26110;Name=LDO45_RS26110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26110;old_locus_tag=BDI4_600036 NZ_CAJZAS010000217.1 GeneMarkS-2+ CDS 27606 28376 . - 0 ID=cds-WP_223964518.1;Parent=gene-LDO45_RS26110;Dbxref=GenBank:WP_223964518.1;Name=WP_223964518.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26110;product=hypothetical protein;protein_id=WP_223964518.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 28524 28919 . - . ID=gene-LDO45_RS26115;Name=LDO45_RS26115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26115;old_locus_tag=BDI4_600037 NZ_CAJZAS010000217.1 Protein Homology CDS 28524 28919 . - 0 ID=cds-WP_223964520.1;Parent=gene-LDO45_RS26115;Dbxref=GenBank:WP_223964520.1;Name=WP_223964520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407510.1;locus_tag=LDO45_RS26115;product=hypothetical protein;protein_id=WP_223964520.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 28912 29151 . - . ID=gene-LDO45_RS26120;Name=LDO45_RS26120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26120;old_locus_tag=BDI4_600038 NZ_CAJZAS010000217.1 GeneMarkS-2+ CDS 28912 29151 . - 0 ID=cds-WP_223964522.1;Parent=gene-LDO45_RS26120;Dbxref=GenBank:WP_223964522.1;Name=WP_223964522.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26120;product=hypothetical protein;protein_id=WP_223964522.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 29148 29675 . - . ID=gene-LDO45_RS26125;Name=LDO45_RS26125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26125;old_locus_tag=BDI4_600039 NZ_CAJZAS010000217.1 Protein Homology CDS 29148 29675 . - 0 ID=cds-WP_223964524.1;Parent=gene-LDO45_RS26125;Dbxref=GenBank:WP_223964524.1;Name=WP_223964524.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017666.5;locus_tag=LDO45_RS26125;product=phage N-6-adenine-methyltransferase;protein_id=WP_223964524.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 29672 29983 . - . ID=gene-LDO45_RS26130;Name=LDO45_RS26130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26130;old_locus_tag=BDI4_600040 NZ_CAJZAS010000217.1 Protein Homology CDS 29672 29983 . - 0 ID=cds-WP_223964526.1;Parent=gene-LDO45_RS26130;Dbxref=GenBank:WP_223964526.1;Name=WP_223964526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881797.1;locus_tag=LDO45_RS26130;product=hypothetical protein;protein_id=WP_223964526.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 29980 31464 . - . ID=gene-LDO45_RS26135;Name=LDO45_RS26135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26135;old_locus_tag=BDI4_600041 NZ_CAJZAS010000217.1 Protein Homology CDS 29980 31464 . - 0 ID=cds-WP_223964528.1;Parent=gene-LDO45_RS26135;Dbxref=GenBank:WP_223964528.1;Name=WP_223964528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004549338.1;locus_tag=LDO45_RS26135;product=hypothetical protein;protein_id=WP_223964528.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 31625 32200 . - . ID=gene-LDO45_RS26140;Name=LDO45_RS26140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26140;old_locus_tag=BDI4_600043 NZ_CAJZAS010000217.1 Protein Homology CDS 31625 32200 . - 0 ID=cds-WP_223964530.1;Parent=gene-LDO45_RS26140;Dbxref=GenBank:WP_223964530.1;Name=WP_223964530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876080.1;locus_tag=LDO45_RS26140;product=hypothetical protein;protein_id=WP_223964530.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 32228 33277 . - . ID=gene-LDO45_RS26145;Name=LDO45_RS26145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26145;old_locus_tag=BDI4_600044 NZ_CAJZAS010000217.1 Protein Homology CDS 32228 33277 . - 0 ID=cds-WP_223964531.1;Parent=gene-LDO45_RS26145;Dbxref=GenBank:WP_223964531.1;Name=WP_223964531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876081.1;locus_tag=LDO45_RS26145;product=hypothetical protein;protein_id=WP_223964531.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 33281 34087 . - . ID=gene-LDO45_RS26150;Name=LDO45_RS26150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26150;old_locus_tag=BDI4_600045 NZ_CAJZAS010000217.1 Protein Homology CDS 33281 34087 . - 0 ID=cds-WP_223964533.1;Parent=gene-LDO45_RS26150;Dbxref=GenBank:WP_223964533.1;Name=WP_223964533.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876082.1;locus_tag=LDO45_RS26150;product=PD-(D/E)XK nuclease-like domain-containing protein;protein_id=WP_223964533.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 34087 34254 . - . ID=gene-LDO45_RS26155;Name=LDO45_RS26155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26155;old_locus_tag=BDI4_600046 NZ_CAJZAS010000217.1 Protein Homology CDS 34087 34254 . - 0 ID=cds-WP_223964535.1;Parent=gene-LDO45_RS26155;Dbxref=GenBank:WP_223964535.1;Name=WP_223964535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488831.1;locus_tag=LDO45_RS26155;product=hypothetical protein;protein_id=WP_223964535.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 34251 35153 . - . ID=gene-LDO45_RS26160;Name=LDO45_RS26160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26160;old_locus_tag=BDI4_600047 NZ_CAJZAS010000217.1 Protein Homology CDS 34251 35153 . - 0 ID=cds-WP_223964537.1;Parent=gene-LDO45_RS26160;Dbxref=GenBank:WP_223964537.1;Name=WP_223964537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403327.1;locus_tag=LDO45_RS26160;product=hypothetical protein;protein_id=WP_223964537.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 35150 35311 . - . ID=gene-LDO45_RS26165;Name=LDO45_RS26165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26165;old_locus_tag=BDI4_600048 NZ_CAJZAS010000217.1 Protein Homology CDS 35150 35311 . - 0 ID=cds-WP_223964539.1;Parent=gene-LDO45_RS26165;Dbxref=GenBank:WP_223964539.1;Name=WP_223964539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467586.1;locus_tag=LDO45_RS26165;product=hypothetical protein;protein_id=WP_223964539.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 35308 35628 . - . ID=gene-LDO45_RS26170;Name=LDO45_RS26170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26170;old_locus_tag=BDI4_600049 NZ_CAJZAS010000217.1 Protein Homology CDS 35308 35628 . - 0 ID=cds-WP_223964541.1;Parent=gene-LDO45_RS26170;Dbxref=GenBank:WP_223964541.1;Name=WP_223964541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488853.1;locus_tag=LDO45_RS26170;product=hypothetical protein;protein_id=WP_223964541.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 35625 35951 . - . ID=gene-LDO45_RS26175;Name=LDO45_RS26175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26175;old_locus_tag=BDI4_600050 NZ_CAJZAS010000217.1 Protein Homology CDS 35625 35951 . - 0 ID=cds-WP_223964543.1;Parent=gene-LDO45_RS26175;Dbxref=GenBank:WP_223964543.1;Name=WP_223964543.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216680.1;locus_tag=LDO45_RS26175;product=hypothetical protein;protein_id=WP_223964543.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 36000 36482 . - . ID=gene-LDO45_RS26180;Name=LDO45_RS26180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26180;old_locus_tag=BDI4_600051 NZ_CAJZAS010000217.1 Protein Homology CDS 36000 36482 . - 0 ID=cds-WP_223964544.1;Parent=gene-LDO45_RS26180;Dbxref=GenBank:WP_223964544.1;Name=WP_223964544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403331.1;locus_tag=LDO45_RS26180;product=hypothetical protein;protein_id=WP_223964544.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 36511 36957 . - . ID=gene-LDO45_RS26185;Name=LDO45_RS26185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26185;old_locus_tag=BDI4_600052 NZ_CAJZAS010000217.1 Protein Homology CDS 36511 36957 . - 0 ID=cds-WP_223964546.1;Parent=gene-LDO45_RS26185;Dbxref=GenBank:WP_223964546.1;Name=WP_223964546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407499.1;locus_tag=LDO45_RS26185;product=hypothetical protein;protein_id=WP_223964546.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 37140 37505 . - . ID=gene-LDO45_RS26190;Name=LDO45_RS26190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26190;old_locus_tag=BDI4_600053 NZ_CAJZAS010000217.1 GeneMarkS-2+ CDS 37140 37505 . - 0 ID=cds-WP_223964548.1;Parent=gene-LDO45_RS26190;Dbxref=GenBank:WP_223964548.1;Name=WP_223964548.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26190;product=hypothetical protein;protein_id=WP_223964548.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 37524 38249 . - . ID=gene-LDO45_RS26195;Name=LDO45_RS26195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26195;old_locus_tag=BDI4_600054 NZ_CAJZAS010000217.1 Protein Homology CDS 37524 38249 . - 0 ID=cds-WP_223964550.1;Parent=gene-LDO45_RS26195;Dbxref=GenBank:WP_223964550.1;Name=WP_223964550.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012920.5;locus_tag=LDO45_RS26195;product=XRE family transcriptional regulator;protein_id=WP_223964550.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 38359 38583 . + . ID=gene-LDO45_RS26200;Name=LDO45_RS26200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26200;old_locus_tag=BDI4_600055 NZ_CAJZAS010000217.1 GeneMarkS-2+ CDS 38359 38583 . + 0 ID=cds-WP_223964552.1;Parent=gene-LDO45_RS26200;Dbxref=GenBank:WP_223964552.1;Name=WP_223964552.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26200;product=hypothetical protein;protein_id=WP_223964552.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 38580 38816 . + . ID=gene-LDO45_RS26205;Name=LDO45_RS26205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26205;old_locus_tag=BDI4_600057 NZ_CAJZAS010000217.1 Protein Homology CDS 38580 38816 . + 0 ID=cds-WP_223964554.1;Parent=gene-LDO45_RS26205;Dbxref=GenBank:WP_223964554.1;Name=WP_223964554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009977911.1;locus_tag=LDO45_RS26205;product=hypothetical protein;protein_id=WP_223964554.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 38813 39022 . + . ID=gene-LDO45_RS26210;Name=LDO45_RS26210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26210;old_locus_tag=BDI4_600056 NZ_CAJZAS010000217.1 Protein Homology CDS 38813 39022 . + 0 ID=cds-WP_060295464.1;Parent=gene-LDO45_RS26210;Dbxref=GenBank:WP_060295464.1;Name=WP_060295464.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853569.1;locus_tag=LDO45_RS26210;product=hypothetical protein;protein_id=WP_060295464.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 39142 40230 . + . ID=gene-LDO45_RS26215;Name=LDO45_RS26215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26215;old_locus_tag=BDI4_600058 NZ_CAJZAS010000217.1 Protein Homology CDS 39142 40230 . + 0 ID=cds-WP_223964556.1;Parent=gene-LDO45_RS26215;Dbxref=GenBank:WP_223964556.1;Name=WP_223964556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213532.1;locus_tag=LDO45_RS26215;product=hypothetical protein;protein_id=WP_223964556.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 40234 41151 . + . ID=gene-LDO45_RS26220;Name=LDO45_RS26220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26220;old_locus_tag=BDI4_600059 NZ_CAJZAS010000217.1 GeneMarkS-2+ CDS 40234 41151 . + 0 ID=cds-WP_223964558.1;Parent=gene-LDO45_RS26220;Dbxref=GenBank:WP_223964558.1;Name=WP_223964558.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26220;product=hypothetical protein;protein_id=WP_223964558.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 41148 41357 . + . ID=gene-LDO45_RS26225;Name=LDO45_RS26225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26225;old_locus_tag=BDI4_600061 NZ_CAJZAS010000217.1 GeneMarkS-2+ CDS 41148 41357 . + 0 ID=cds-WP_223964560.1;Parent=gene-LDO45_RS26225;Dbxref=GenBank:WP_223964560.1;Name=WP_223964560.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26225;product=hypothetical protein;protein_id=WP_223964560.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 41354 41689 . + . ID=gene-LDO45_RS26230;Name=LDO45_RS26230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26230;old_locus_tag=BDI4_600060 NZ_CAJZAS010000217.1 GeneMarkS-2+ CDS 41354 41689 . + 0 ID=cds-WP_223964561.1;Parent=gene-LDO45_RS26230;Dbxref=GenBank:WP_223964561.1;Name=WP_223964561.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26230;product=hypothetical protein;protein_id=WP_223964561.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 41686 41874 . + . ID=gene-LDO45_RS26235;Name=LDO45_RS26235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26235;old_locus_tag=BDI4_600062 NZ_CAJZAS010000217.1 GeneMarkS-2+ CDS 41686 41874 . + 0 ID=cds-WP_223964563.1;Parent=gene-LDO45_RS26235;Dbxref=GenBank:WP_223964563.1;Name=WP_223964563.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26235;product=hypothetical protein;protein_id=WP_223964563.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 41871 42191 . + . ID=gene-LDO45_RS26240;Name=LDO45_RS26240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26240;old_locus_tag=BDI4_600063 NZ_CAJZAS010000217.1 GeneMarkS-2+ CDS 41871 42191 . + 0 ID=cds-WP_223964565.1;Parent=gene-LDO45_RS26240;Dbxref=GenBank:WP_223964565.1;Name=WP_223964565.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26240;product=hypothetical protein;protein_id=WP_223964565.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 42185 42673 . + . ID=gene-LDO45_RS26245;Name=LDO45_RS26245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26245;old_locus_tag=BDI4_600064 NZ_CAJZAS010000217.1 Protein Homology CDS 42185 42673 . + 0 ID=cds-WP_223964567.1;Parent=gene-LDO45_RS26245;Dbxref=GenBank:WP_223964567.1;Name=WP_223964567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007181658.1;locus_tag=LDO45_RS26245;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_223964567.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 42675 42878 . + . ID=gene-LDO45_RS26250;Name=LDO45_RS26250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26250;old_locus_tag=BDI4_600065 NZ_CAJZAS010000217.1 GeneMarkS-2+ CDS 42675 42878 . + 0 ID=cds-WP_223964569.1;Parent=gene-LDO45_RS26250;Dbxref=GenBank:WP_223964569.1;Name=WP_223964569.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26250;product=hypothetical protein;protein_id=WP_223964569.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 42875 43198 . + . ID=gene-LDO45_RS26255;Name=LDO45_RS26255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26255;old_locus_tag=BDI4_600066 NZ_CAJZAS010000217.1 GeneMarkS-2+ CDS 42875 43198 . + 0 ID=cds-WP_223964571.1;Parent=gene-LDO45_RS26255;Dbxref=GenBank:WP_223964571.1;Name=WP_223964571.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26255;product=hypothetical protein;protein_id=WP_223964571.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 43284 43718 . + . ID=gene-LDO45_RS26260;Name=LDO45_RS26260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26260;old_locus_tag=BDI4_600067 NZ_CAJZAS010000217.1 Protein Homology CDS 43284 43718 . + 0 ID=cds-WP_223964572.1;Parent=gene-LDO45_RS26260;Dbxref=GenBank:WP_223964572.1;Name=WP_223964572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876092.1;locus_tag=LDO45_RS26260;product=hypothetical protein;protein_id=WP_223964572.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 43721 43939 . + . ID=gene-LDO45_RS26265;Name=LDO45_RS26265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26265;old_locus_tag=BDI4_600068 NZ_CAJZAS010000217.1 GeneMarkS-2+ CDS 43721 43939 . + 0 ID=cds-WP_223964574.1;Parent=gene-LDO45_RS26265;Dbxref=GenBank:WP_223964574.1;Name=WP_223964574.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26265;product=hypothetical protein;protein_id=WP_223964574.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 43936 45402 . + . ID=gene-LDO45_RS26270;Name=LDO45_RS26270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26270;old_locus_tag=BDI4_600069 NZ_CAJZAS010000217.1 Protein Homology CDS 43936 45402 . + 0 ID=cds-WP_223964576.1;Parent=gene-LDO45_RS26270;Dbxref=GenBank:WP_223964576.1;Name=WP_223964576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876093.1;locus_tag=LDO45_RS26270;product=PBSX family phage terminase large subunit;protein_id=WP_223964576.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 45451 45921 . + . ID=gene-LDO45_RS26275;Name=LDO45_RS26275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26275;old_locus_tag=BDI4_600070 NZ_CAJZAS010000217.1 GeneMarkS-2+ CDS 45451 45921 . + 0 ID=cds-WP_223964578.1;Parent=gene-LDO45_RS26275;Dbxref=GenBank:WP_223964578.1;Name=WP_223964578.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26275;product=hypothetical protein;protein_id=WP_223964578.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 45939 47573 . + . ID=gene-LDO45_RS26280;Name=LDO45_RS26280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26280;old_locus_tag=BDI4_600071 NZ_CAJZAS010000217.1 Protein Homology CDS 45939 47573 . + 0 ID=cds-WP_223964580.1;Parent=gene-LDO45_RS26280;Dbxref=GenBank:WP_223964580.1;Name=WP_223964580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007181666.1;locus_tag=LDO45_RS26280;product=DUF1073 domain-containing protein;protein_id=WP_223964580.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 47573 48382 . + . ID=gene-LDO45_RS26285;Name=LDO45_RS26285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26285;old_locus_tag=BDI4_600072 NZ_CAJZAS010000217.1 Protein Homology CDS 47573 48382 . + 0 ID=cds-WP_223964582.1;Parent=gene-LDO45_RS26285;Dbxref=GenBank:WP_223964582.1;Name=WP_223964582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876095.1;locus_tag=LDO45_RS26285;product=phage minor head protein;protein_id=WP_223964582.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 48369 49601 . + . ID=gene-LDO45_RS26290;Name=LDO45_RS26290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26290;old_locus_tag=BDI4_600073 NZ_CAJZAS010000217.1 Protein Homology CDS 48369 49601 . + 0 ID=cds-WP_223964583.1;Parent=gene-LDO45_RS26290;Dbxref=GenBank:WP_223964583.1;Name=WP_223964583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007181668.1;locus_tag=LDO45_RS26290;product=DUF2213 domain-containing protein;protein_id=WP_223964583.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 49614 50090 . + . ID=gene-LDO45_RS26295;Name=LDO45_RS26295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26295;old_locus_tag=BDI4_600074 NZ_CAJZAS010000217.1 GeneMarkS-2+ CDS 49614 50090 . + 0 ID=cds-WP_069241205.1;Parent=gene-LDO45_RS26295;Dbxref=GenBank:WP_069241205.1;Name=WP_069241205.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26295;product=hypothetical protein;protein_id=WP_069241205.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 50087 51097 . + . ID=gene-LDO45_RS26300;Name=LDO45_RS26300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26300;old_locus_tag=BDI4_600075 NZ_CAJZAS010000217.1 Protein Homology CDS 50087 51097 . + 0 ID=cds-WP_223964585.1;Parent=gene-LDO45_RS26300;Dbxref=GenBank:WP_223964585.1;Name=WP_223964585.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876098.1;locus_tag=LDO45_RS26300;product=DUF2184 domain-containing protein;protein_id=WP_223964585.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 51099 51509 . + . ID=gene-LDO45_RS26305;Name=LDO45_RS26305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26305;old_locus_tag=BDI4_600076 NZ_CAJZAS010000217.1 GeneMarkS-2+ CDS 51099 51509 . + 0 ID=cds-WP_223964587.1;Parent=gene-LDO45_RS26305;Dbxref=GenBank:WP_223964587.1;Name=WP_223964587.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26305;product=hypothetical protein;protein_id=WP_223964587.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 51506 51928 . + . ID=gene-LDO45_RS26310;Name=LDO45_RS26310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26310;old_locus_tag=BDI4_600077 NZ_CAJZAS010000217.1 Protein Homology CDS 51506 51928 . + 0 ID=cds-WP_223964589.1;Parent=gene-LDO45_RS26310;Dbxref=GenBank:WP_223964589.1;Name=WP_223964589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876100.1;locus_tag=LDO45_RS26310;product=DUF4054 domain-containing protein;protein_id=WP_223964589.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 51915 52376 . + . ID=gene-LDO45_RS26315;Name=LDO45_RS26315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26315;old_locus_tag=BDI4_600078 NZ_CAJZAS010000217.1 Protein Homology CDS 51915 52376 . + 0 ID=cds-WP_223964591.1;Parent=gene-LDO45_RS26315;Dbxref=GenBank:WP_223964591.1;Name=WP_223964591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876101.1;locus_tag=LDO45_RS26315;product=hypothetical protein;protein_id=WP_223964591.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 52373 52762 . + . ID=gene-LDO45_RS26320;Name=LDO45_RS26320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26320;old_locus_tag=BDI4_600079 NZ_CAJZAS010000217.1 Protein Homology CDS 52373 52762 . + 0 ID=cds-WP_223964593.1;Parent=gene-LDO45_RS26320;Dbxref=GenBank:WP_223964593.1;Name=WP_223964593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876102.1;locus_tag=LDO45_RS26320;product=hypothetical protein;protein_id=WP_223964593.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 52770 53315 . + . ID=gene-LDO45_RS26325;Name=LDO45_RS26325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26325;old_locus_tag=BDI4_600080 NZ_CAJZAS010000217.1 Protein Homology CDS 52770 53315 . + 0 ID=cds-WP_223964595.1;Parent=gene-LDO45_RS26325;Dbxref=GenBank:WP_223964595.1;Name=WP_223964595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876103.1;locus_tag=LDO45_RS26325;product=LIC_12616 family protein;protein_id=WP_223964595.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 53319 55040 . + . ID=gene-LDO45_RS26330;Name=LDO45_RS26330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26330;old_locus_tag=BDI4_600082 NZ_CAJZAS010000217.1 Protein Homology CDS 53319 55040 . + 0 ID=cds-WP_223964597.1;Parent=gene-LDO45_RS26330;Dbxref=GenBank:WP_223964597.1;Name=WP_223964597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876104.1;locus_tag=LDO45_RS26330;product=DUF3383 domain-containing protein;protein_id=WP_223964597.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 55051 55485 . + . ID=gene-LDO45_RS26335;Name=LDO45_RS26335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26335;old_locus_tag=BDI4_600083 NZ_CAJZAS010000217.1 Protein Homology CDS 55051 55485 . + 0 ID=cds-WP_223964599.1;Parent=gene-LDO45_RS26335;Dbxref=GenBank:WP_223964599.1;Name=WP_223964599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876105.1;locus_tag=LDO45_RS26335;product=hypothetical protein;protein_id=WP_223964599.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 55487 55924 . + . ID=gene-LDO45_RS26340;Name=LDO45_RS26340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26340;old_locus_tag=BDI4_600084 NZ_CAJZAS010000217.1 Protein Homology CDS 55487 55924 . + 0 ID=cds-WP_223964601.1;Parent=gene-LDO45_RS26340;Dbxref=GenBank:WP_223964601.1;Name=WP_223964601.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876106.1;locus_tag=LDO45_RS26340;product=hypothetical protein;protein_id=WP_223964601.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 55939 56094 . + . ID=gene-LDO45_RS26345;Name=LDO45_RS26345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26345;old_locus_tag=BDI4_600085 NZ_CAJZAS010000217.1 Protein Homology CDS 55939 56094 . + 0 ID=cds-WP_223964603.1;Parent=gene-LDO45_RS26345;Dbxref=GenBank:WP_223964603.1;Name=WP_223964603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876107.1;locus_tag=LDO45_RS26345;product=transcription elongation factor GreA;protein_id=WP_223964603.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 56097 57926 . + . ID=gene-LDO45_RS26350;Name=LDO45_RS26350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26350;old_locus_tag=BDI4_600086 NZ_CAJZAS010000217.1 Protein Homology CDS 56097 57926 . + 0 ID=cds-WP_223964605.1;Parent=gene-LDO45_RS26350;Dbxref=GenBank:WP_223964605.1;Name=WP_223964605.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037025.5;locus_tag=LDO45_RS26350;product=phage tail tip lysozyme;protein_id=WP_223964605.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 57928 58602 . + . ID=gene-LDO45_RS26355;Name=LDO45_RS26355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26355;old_locus_tag=BDI4_600087 NZ_CAJZAS010000217.1 GeneMarkS-2+ CDS 57928 58602 . + 0 ID=cds-WP_223964607.1;Parent=gene-LDO45_RS26355;Dbxref=GenBank:WP_223964607.1;Name=WP_223964607.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26355;product=phage baseplate protein;protein_id=WP_223964607.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 58602 58904 . + . ID=gene-LDO45_RS26360;Name=LDO45_RS26360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26360;old_locus_tag=BDI4_600088 NZ_CAJZAS010000217.1 Protein Homology CDS 58602 58904 . + 0 ID=cds-WP_060103025.1;Parent=gene-LDO45_RS26360;Dbxref=GenBank:WP_060103025.1;Name=WP_060103025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007181682.1;locus_tag=LDO45_RS26360;product=hypothetical protein;protein_id=WP_060103025.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 58901 59770 . + . ID=gene-LDO45_RS26365;Name=LDO45_RS26365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26365;old_locus_tag=BDI4_600089 NZ_CAJZAS010000217.1 Protein Homology CDS 58901 59770 . + 0 ID=cds-WP_223964609.1;Parent=gene-LDO45_RS26365;Dbxref=GenBank:WP_223964609.1;Name=WP_223964609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876111.1;locus_tag=LDO45_RS26365;product=hypothetical protein;protein_id=WP_223964609.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 59760 60494 . + . ID=gene-LDO45_RS26370;Name=LDO45_RS26370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26370;old_locus_tag=BDI4_600090 NZ_CAJZAS010000217.1 Protein Homology CDS 59760 60494 . + 0 ID=cds-WP_223964611.1;Parent=gene-LDO45_RS26370;Dbxref=GenBank:WP_223964611.1;Name=WP_223964611.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007181684.1;locus_tag=LDO45_RS26370;product=phage baseplate assembly protein;protein_id=WP_223964611.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 60494 60844 . + . ID=gene-LDO45_RS26375;Name=LDO45_RS26375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26375;old_locus_tag=BDI4_600091 NZ_CAJZAS010000217.1 Protein Homology CDS 60494 60844 . + 0 ID=cds-WP_223964613.1;Parent=gene-LDO45_RS26375;Dbxref=GenBank:WP_223964613.1;Name=WP_223964613.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876114.1;locus_tag=LDO45_RS26375;product=hypothetical protein;protein_id=WP_223964613.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 60853 62088 . + . ID=gene-LDO45_RS26380;Name=LDO45_RS26380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26380;old_locus_tag=BDI4_600092 NZ_CAJZAS010000217.1 Protein Homology CDS 60853 62088 . + 0 ID=cds-WP_223964615.1;Parent=gene-LDO45_RS26380;Dbxref=GenBank:WP_223964615.1;Name=WP_223964615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013395249.1;locus_tag=LDO45_RS26380;product=baseplate J/gp47 family protein;protein_id=WP_223964615.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 62085 63554 . + . ID=gene-LDO45_RS26385;Name=LDO45_RS26385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26385;old_locus_tag=BDI4_600093 NZ_CAJZAS010000217.1 Protein Homology CDS 62085 63554 . + 0 ID=cds-WP_223964618.1;Parent=gene-LDO45_RS26385;Dbxref=GenBank:WP_223964618.1;Name=WP_223964618.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022494.5;locus_tag=LDO45_RS26385;product=DUF2612 domain-containing protein;protein_id=WP_223964618.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 63544 64680 . + . ID=gene-LDO45_RS26390;Name=LDO45_RS26390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26390;old_locus_tag=BDI4_600094 NZ_CAJZAS010000217.1 Protein Homology CDS 63544 64680 . + 0 ID=cds-WP_223964620.1;Parent=gene-LDO45_RS26390;Dbxref=GenBank:WP_223964620.1;Name=WP_223964620.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011487649.1;locus_tag=LDO45_RS26390;product=hypothetical protein;protein_id=WP_223964620.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 64689 64877 . + . ID=gene-LDO45_RS26395;Name=LDO45_RS26395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26395 NZ_CAJZAS010000217.1 GeneMarkS-2+ CDS 64689 64877 . + 0 ID=cds-WP_223964622.1;Parent=gene-LDO45_RS26395;Dbxref=GenBank:WP_223964622.1;Name=WP_223964622.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26395;product=hypothetical protein;protein_id=WP_223964622.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 64858 65607 . - . ID=gene-LDO45_RS26400;Name=LDO45_RS26400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26400;old_locus_tag=BDI4_600096 NZ_CAJZAS010000217.1 Protein Homology CDS 64858 65607 . - 0 ID=cds-WP_223964623.1;Parent=gene-LDO45_RS26400;Dbxref=GenBank:WP_223964623.1;Name=WP_223964623.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024863.5;locus_tag=LDO45_RS26400;product=SGNH/GDSL hydrolase family protein;protein_id=WP_223964623.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 65604 65885 . - . ID=gene-LDO45_RS26405;Name=LDO45_RS26405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26405;old_locus_tag=BDI4_600097 NZ_CAJZAS010000217.1 Protein Homology CDS 65604 65885 . - 0 ID=cds-WP_223964624.1;Parent=gene-LDO45_RS26405;Dbxref=GenBank:WP_223964624.1;Name=WP_223964624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329954.1;locus_tag=LDO45_RS26405;product=XRE family transcriptional regulator;protein_id=WP_223964624.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 66146 66427 . + . ID=gene-LDO45_RS26410;Name=LDO45_RS26410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26410 NZ_CAJZAS010000217.1 GeneMarkS-2+ CDS 66146 66427 . + 0 ID=cds-WP_223964625.1;Parent=gene-LDO45_RS26410;Dbxref=GenBank:WP_223964625.1;Name=WP_223964625.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26410;product=hypothetical protein;protein_id=WP_223964625.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 66424 66708 . + . ID=gene-LDO45_RS26415;Name=LDO45_RS26415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26415;old_locus_tag=BDI4_600099 NZ_CAJZAS010000217.1 GeneMarkS-2+ CDS 66424 66708 . + 0 ID=cds-WP_060103121.1;Parent=gene-LDO45_RS26415;Dbxref=GenBank:WP_060103121.1;Name=WP_060103121.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26415;product=hypothetical protein;protein_id=WP_060103121.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 66695 67516 . + . ID=gene-LDO45_RS26420;Name=LDO45_RS26420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26420;old_locus_tag=BDI4_600100 NZ_CAJZAS010000217.1 Protein Homology CDS 66695 67516 . + 0 ID=cds-WP_223964626.1;Parent=gene-LDO45_RS26420;Dbxref=GenBank:WP_223964626.1;Name=WP_223964626.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853547.1;locus_tag=LDO45_RS26420;product=lysozyme;protein_id=WP_223964626.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 67513 67833 . + . ID=gene-LDO45_RS26425;Name=LDO45_RS26425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26425;old_locus_tag=BDI4_600101 NZ_CAJZAS010000217.1 Protein Homology CDS 67513 67833 . + 0 ID=cds-WP_223964627.1;Parent=gene-LDO45_RS26425;Dbxref=GenBank:WP_223964627.1;Name=WP_223964627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009977865.1;locus_tag=LDO45_RS26425;product=hypothetical protein;protein_id=WP_223964627.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 67757 68017 . + . ID=gene-LDO45_RS26430;Name=LDO45_RS26430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26430;old_locus_tag=BDI4_600102 NZ_CAJZAS010000217.1 Protein Homology CDS 67757 68017 . + 0 ID=cds-WP_223964628.1;Parent=gene-LDO45_RS26430;Dbxref=GenBank:WP_223964628.1;Name=WP_223964628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007181696.1;locus_tag=LDO45_RS26430;product=hypothetical protein;protein_id=WP_223964628.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 68030 68398 . - . ID=gene-LDO45_RS26435;Name=LDO45_RS26435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26435;old_locus_tag=BDI4_600103 NZ_CAJZAS010000217.1 GeneMarkS-2+ CDS 68030 68398 . - 0 ID=cds-WP_223964629.1;Parent=gene-LDO45_RS26435;Dbxref=GenBank:WP_223964629.1;Name=WP_223964629.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26435;product=hypothetical protein;protein_id=WP_223964629.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 68478 69161 . + . ID=gene-LDO45_RS26440;Name=LDO45_RS26440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26440;old_locus_tag=BDI4_600104 NZ_CAJZAS010000217.1 Protein Homology CDS 68478 69161 . + 0 ID=cds-WP_223964630.1;Parent=gene-LDO45_RS26440;Dbxref=GenBank:WP_223964630.1;Name=WP_223964630.1;Ontology_term=GO:0006974,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA damage response|0006974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764383.1;locus_tag=LDO45_RS26440;product=SOS response-associated peptidase family protein;protein_id=WP_223964630.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 69489 70697 . + . ID=gene-LDO45_RS26445;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=LDO45_RS26445;old_locus_tag=BDI4_600105 NZ_CAJZAS010000217.1 Protein Homology CDS 69489 70697 . + 0 ID=cds-WP_223964631.1;Parent=gene-LDO45_RS26445;Dbxref=GenBank:WP_223964631.1;Name=WP_223964631.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656681.1;locus_tag=LDO45_RS26445;product=outer membrane protein assembly factor BamC;protein_id=WP_223964631.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 71379 71636 . - . ID=gene-LDO45_RS26450;Name=LDO45_RS26450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26450;old_locus_tag=BDI4_600106 NZ_CAJZAS010000217.1 Protein Homology CDS 71379 71636 . - 0 ID=cds-WP_059533081.1;Parent=gene-LDO45_RS26450;Dbxref=GenBank:WP_059533081.1;Name=WP_059533081.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191628.1;locus_tag=LDO45_RS26450;product=hypothetical protein;protein_id=WP_059533081.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 71773 72051 . - . ID=gene-LDO45_RS26455;Name=LDO45_RS26455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26455;old_locus_tag=BDI4_600107 NZ_CAJZAS010000217.1 Protein Homology CDS 71773 72051 . - 0 ID=cds-WP_059533079.1;Parent=gene-LDO45_RS26455;Dbxref=GenBank:WP_059533079.1;Name=WP_059533079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521679.1;locus_tag=LDO45_RS26455;product=hypothetical protein;protein_id=WP_059533079.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 72274 72990 . - . ID=gene-LDO45_RS26460;Name=LDO45_RS26460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26460;old_locus_tag=BDI4_600108 NZ_CAJZAS010000217.1 Protein Homology CDS 72274 72990 . - 0 ID=cds-WP_223964632.1;Parent=gene-LDO45_RS26460;Dbxref=GenBank:WP_223964632.1;Name=WP_223964632.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413752.1;locus_tag=LDO45_RS26460;product=YdcF family protein;protein_id=WP_223964632.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 73148 73465 . + . ID=gene-LDO45_RS26465;Name=LDO45_RS26465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26465;old_locus_tag=BDI4_600109 NZ_CAJZAS010000217.1 Protein Homology CDS 73148 73465 . + 0 ID=cds-WP_059510817.1;Parent=gene-LDO45_RS26465;Dbxref=GenBank:WP_059510817.1;Name=WP_059510817.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017332596.1;locus_tag=LDO45_RS26465;product=hypothetical protein;protein_id=WP_059510817.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 73649 73900 . - . ID=gene-LDO45_RS26470;Name=LDO45_RS26470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26470;old_locus_tag=BDI4_600110 NZ_CAJZAS010000217.1 Protein Homology CDS 73649 73900 . - 0 ID=cds-WP_059533075.1;Parent=gene-LDO45_RS26470;Dbxref=GenBank:WP_059533075.1;Name=WP_059533075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656684.1;locus_tag=LDO45_RS26470;product=hypothetical protein;protein_id=WP_059533075.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq pseudogene 74102 74497 . - . ID=gene-LDO45_RS26475;Name=LDO45_RS26475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS26475;old_locus_tag=BDI4_600111;partial=true;pseudo=true;start_range=.,74102 NZ_CAJZAS010000217.1 Protein Homology CDS 74102 74497 . - 0 ID=cds-LDO45_RS26475;Parent=gene-LDO45_RS26475;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603844.1;locus_tag=LDO45_RS26475;partial=true;product=transposase;pseudo=true;start_range=.,74102;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 74928 75830 . + . ID=gene-LDO45_RS26480;Name=LDO45_RS26480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26480;old_locus_tag=BDI4_600112 NZ_CAJZAS010000217.1 Protein Homology CDS 74928 75830 . + 0 ID=cds-WP_223964633.1;Parent=gene-LDO45_RS26480;Dbxref=GenBank:WP_223964633.1;Name=WP_223964633.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193481.1;locus_tag=LDO45_RS26480;product=LysR family transcriptional regulator;protein_id=WP_223964633.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 75895 77097 . + . ID=gene-LDO45_RS26485;Name=LDO45_RS26485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26485;old_locus_tag=BDI4_600113 NZ_CAJZAS010000217.1 Protein Homology CDS 75895 77097 . + 0 ID=cds-WP_223964634.1;Parent=gene-LDO45_RS26485;Dbxref=GenBank:WP_223964634.1;Name=WP_223964634.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545257.1;locus_tag=LDO45_RS26485;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_223964634.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 77370 78392 . + . ID=gene-LDO45_RS26490;Name=scpB;gbkey=Gene;gene=scpB;gene_biotype=protein_coding;locus_tag=LDO45_RS26490;old_locus_tag=BDI4_600114 NZ_CAJZAS010000217.1 Protein Homology CDS 77370 78392 . + 0 ID=cds-WP_223964635.1;Parent=gene-LDO45_RS26490;Dbxref=GenBank:WP_223964635.1;Name=WP_223964635.1;Ontology_term=GO:0007059,GO:0005515;gbkey=CDS;gene=scpB;go_function=protein binding|0005515||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884579.1;locus_tag=LDO45_RS26490;product=SMC-Scp complex subunit ScpB;protein_id=WP_223964635.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 78453 80156 . + . ID=gene-LDO45_RS26495;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=LDO45_RS26495;old_locus_tag=BDI4_600115 NZ_CAJZAS010000217.1 Protein Homology CDS 78453 80156 . + 0 ID=cds-WP_223964636.1;Parent=gene-LDO45_RS26495;Dbxref=GenBank:WP_223964636.1;Name=WP_223964636.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328380.1;locus_tag=LDO45_RS26495;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_223964636.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 80574 81032 . + . ID=gene-LDO45_RS26500;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=LDO45_RS26500;old_locus_tag=BDI4_600116 NZ_CAJZAS010000217.1 Protein Homology CDS 80574 81032 . + 0 ID=cds-WP_014897219.1;Parent=gene-LDO45_RS26500;Dbxref=GenBank:WP_014897219.1;Name=WP_014897219.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402064.1;locus_tag=LDO45_RS26500;product=ribosome maturation factor RimP;protein_id=WP_014897219.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 81032 82507 . + . ID=gene-LDO45_RS26505;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=LDO45_RS26505;old_locus_tag=BDI4_600117 NZ_CAJZAS010000217.1 Protein Homology CDS 81032 82507 . + 0 ID=cds-WP_059533060.1;Parent=gene-LDO45_RS26505;Dbxref=GenBank:WP_059533060.1;Name=WP_059533060.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012432652.1;locus_tag=LDO45_RS26505;product=transcription termination factor NusA;protein_id=WP_059533060.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 82599 85514 . + . ID=gene-LDO45_RS26510;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=LDO45_RS26510;old_locus_tag=BDI4_600118 NZ_CAJZAS010000217.1 Protein Homology CDS 82599 85514 . + 0 ID=cds-WP_223964637.1;Parent=gene-LDO45_RS26510;Dbxref=GenBank:WP_223964637.1;Name=WP_223964637.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402062.1;locus_tag=LDO45_RS26510;product=translation initiation factor IF-2;protein_id=WP_223964637.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 85705 86025 . + . ID=gene-LDO45_RS26515;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=LDO45_RS26515;old_locus_tag=BDI4_600119 NZ_CAJZAS010000217.1 Protein Homology CDS 85705 86025 . + 0 ID=cds-WP_374109553.1;Parent=gene-LDO45_RS26515;Dbxref=GenBank:WP_374109553.1;Name=WP_374109553.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409612.1;locus_tag=LDO45_RS26515;product=30S ribosome-binding factor RbfA;protein_id=WP_374109553.1;transl_table=11 NZ_CAJZAS010000217.1 RefSeq gene 86039 86971 . + . ID=gene-LDO45_RS26520;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=LDO45_RS26520;old_locus_tag=BDI4_600120 NZ_CAJZAS010000217.1 Protein Homology CDS 86039 86971 . + 0 ID=cds-WP_059533051.1;Parent=gene-LDO45_RS26520;Dbxref=GenBank:WP_059533051.1;Name=WP_059533051.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328383.1;locus_tag=LDO45_RS26520;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_059533051.1;transl_table=11 ##sequence-region NZ_CAJZAS010000218.1 1 14362 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000218.1 RefSeq region 1 14362 . + . ID=NZ_CAJZAS010000218.1:1..14362;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_61 NZ_CAJZAS010000218.1 RefSeq pseudogene 1 368 . + . ID=gene-LDO45_RS26525;Name=LDO45_RS26525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS26525;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000218.1 Protein Homology CDS 1 368 . + 2 ID=cds-LDO45_RS26525;Parent=gene-LDO45_RS26525;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723571.1;locus_tag=LDO45_RS26525;partial=true;product=M48 family peptidase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000218.1 RefSeq gene 400 1005 . - . ID=gene-LDO45_RS26530;Name=LDO45_RS26530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26530;old_locus_tag=BDI4_610002 NZ_CAJZAS010000218.1 Protein Homology CDS 400 1005 . - 0 ID=cds-WP_223964639.1;Parent=gene-LDO45_RS26530;Dbxref=GenBank:WP_223964639.1;Name=WP_223964639.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761758.1;locus_tag=LDO45_RS26530;product=DUF2946 family protein;protein_id=WP_223964639.1;transl_table=11 NZ_CAJZAS010000218.1 RefSeq gene 998 2035 . - . ID=gene-LDO45_RS26535;Name=LDO45_RS26535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26535;old_locus_tag=BDI4_610003 NZ_CAJZAS010000218.1 Protein Homology CDS 998 2035 . - 0 ID=cds-WP_059528000.1;Parent=gene-LDO45_RS26535;Dbxref=GenBank:WP_059528000.1;Name=WP_059528000.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189905.1;locus_tag=LDO45_RS26535;product=hydrolase;protein_id=WP_059528000.1;transl_table=11 NZ_CAJZAS010000218.1 RefSeq gene 2069 2515 . - . ID=gene-LDO45_RS26540;Name=LDO45_RS26540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26540;old_locus_tag=BDI4_610004 NZ_CAJZAS010000218.1 Protein Homology CDS 2069 2515 . - 0 ID=cds-WP_006749968.1;Parent=gene-LDO45_RS26540;Dbxref=GenBank:WP_006749968.1;Name=WP_006749968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090801.1;locus_tag=LDO45_RS26540;product=nuclear transport factor 2 family protein;protein_id=WP_006749968.1;transl_table=11 NZ_CAJZAS010000218.1 RefSeq gene 2631 3668 . - . ID=gene-LDO45_RS26545;Name=waaF;gbkey=Gene;gene=waaF;gene_biotype=protein_coding;locus_tag=LDO45_RS26545;old_locus_tag=BDI4_610005 NZ_CAJZAS010000218.1 Protein Homology CDS 2631 3668 . - 0 ID=cds-WP_059527997.1;Parent=gene-LDO45_RS26545;Dbxref=GenBank:WP_059527997.1;Name=WP_059527997.1;Ontology_term=GO:0009103,GO:0008920,GO:0016757;gbkey=CDS;gene=waaF;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA,glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011401829.1;locus_tag=LDO45_RS26545;product=lipopolysaccharide heptosyltransferase II;protein_id=WP_059527997.1;transl_table=11 NZ_CAJZAS010000218.1 RefSeq gene 3806 4000 . - . ID=gene-LDO45_RS26550;Name=LDO45_RS26550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26550;old_locus_tag=BDI4_610006 NZ_CAJZAS010000218.1 Protein Homology CDS 3806 4000 . - 0 ID=cds-WP_006749970.1;Parent=gene-LDO45_RS26550;Dbxref=GenBank:WP_006749970.1;Name=WP_006749970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180502.1;locus_tag=LDO45_RS26550;product=zinc-finger domain-containing protein;protein_id=WP_006749970.1;transl_table=11 NZ_CAJZAS010000218.1 RefSeq gene 4051 4974 . - . ID=gene-LDO45_RS26555;Name=LDO45_RS26555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26555;old_locus_tag=BDI4_610007 NZ_CAJZAS010000218.1 Protein Homology CDS 4051 4974 . - 0 ID=cds-WP_059447778.1;Parent=gene-LDO45_RS26555;Dbxref=GenBank:WP_059447778.1;Name=WP_059447778.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069237.1;locus_tag=LDO45_RS26555;product=branched-chain amino acid transaminase;protein_id=WP_059447778.1;transl_table=11 NZ_CAJZAS010000218.1 RefSeq gene 5180 5935 . + . ID=gene-LDO45_RS26560;Name=LDO45_RS26560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26560;old_locus_tag=BDI4_610008 NZ_CAJZAS010000218.1 Protein Homology CDS 5180 5935 . + 0 ID=cds-WP_059690615.1;Parent=gene-LDO45_RS26560;Dbxref=GenBank:WP_059690615.1;Name=WP_059690615.1;Ontology_term=GO:0006865,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364614.1;locus_tag=LDO45_RS26560;product=AzlC family ABC transporter permease;protein_id=WP_059690615.1;transl_table=11 NZ_CAJZAS010000218.1 RefSeq gene 5932 6255 . + . ID=gene-LDO45_RS26565;Name=LDO45_RS26565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26565;old_locus_tag=BDI4_610009 NZ_CAJZAS010000218.1 Protein Homology CDS 5932 6255 . + 0 ID=cds-WP_059527991.1;Parent=gene-LDO45_RS26565;Dbxref=GenBank:WP_059527991.1;Name=WP_059527991.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010101895.1;locus_tag=LDO45_RS26565;product=AzlD domain-containing protein;protein_id=WP_059527991.1;transl_table=11 NZ_CAJZAS010000218.1 RefSeq gene 6536 7732 . + . ID=gene-LDO45_RS26570;Name=LDO45_RS26570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26570;old_locus_tag=BDI4_610010 NZ_CAJZAS010000218.1 Protein Homology CDS 6536 7732 . + 0 ID=cds-WP_223964640.1;Parent=gene-LDO45_RS26570;Dbxref=GenBank:WP_223964640.1;Name=WP_223964640.1;Ontology_term=GO:0006096,GO:0004618,GO:0005524,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphoglycerate kinase activity|0004618||IEA,ATP binding|0005524||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013699247.1;locus_tag=LDO45_RS26570;product=phosphoglycerate kinase;protein_id=WP_223964640.1;transl_table=11 NZ_CAJZAS010000218.1 RefSeq gene 7890 8018 . - . ID=gene-LDO45_RS34305;Name=LDO45_RS34305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34305 NZ_CAJZAS010000218.1 GeneMarkS-2+ CDS 7890 8018 . - 0 ID=cds-WP_256097633.1;Parent=gene-LDO45_RS34305;Dbxref=GenBank:WP_256097633.1;Name=WP_256097633.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34305;product=hypothetical protein;protein_id=WP_256097633.1;transl_table=11 NZ_CAJZAS010000218.1 RefSeq gene 8017 9453 . + . ID=gene-LDO45_RS26575;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=LDO45_RS26575;old_locus_tag=BDI4_610011 NZ_CAJZAS010000218.1 Protein Homology CDS 8017 9453 . + 0 ID=cds-WP_059447904.1;Parent=gene-LDO45_RS26575;Dbxref=GenBank:WP_059447904.1;Name=WP_059447904.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004188973.1;locus_tag=LDO45_RS26575;product=pyruvate kinase;protein_id=WP_059447904.1;transl_table=11 NZ_CAJZAS010000218.1 RefSeq gene 9764 10828 . + . ID=gene-LDO45_RS26580;Name=fba;gbkey=Gene;gene=fba;gene_biotype=protein_coding;locus_tag=LDO45_RS26580;old_locus_tag=BDI4_610012 NZ_CAJZAS010000218.1 Protein Homology CDS 9764 10828 . + 0 ID=cds-WP_014896168.1;Parent=gene-LDO45_RS26580;Dbxref=GenBank:WP_014896168.1;Name=WP_014896168.1;Note=catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle%2C glycolysis%2C and/or gluconeogenesis;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;gene=fba;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013589515.1;locus_tag=LDO45_RS26580;product=class II fructose-bisphosphate aldolase;protein_id=WP_014896168.1;transl_table=11 NZ_CAJZAS010000218.1 RefSeq gene 11064 11954 . + . ID=gene-LDO45_RS26585;Name=LDO45_RS26585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26585;old_locus_tag=BDI4_610013 NZ_CAJZAS010000218.1 Protein Homology CDS 11064 11954 . + 0 ID=cds-WP_059701766.1;Parent=gene-LDO45_RS26585;Dbxref=GenBank:WP_059701766.1;Name=WP_059701766.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723567.1;locus_tag=LDO45_RS26585;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_059701766.1;transl_table=11 NZ_CAJZAS010000218.1 RefSeq gene 11972 12493 . + . ID=gene-LDO45_RS26590;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=LDO45_RS26590;old_locus_tag=BDI4_610014 NZ_CAJZAS010000218.1 Protein Homology CDS 11972 12493 . + 0 ID=cds-WP_012364611.1;Parent=gene-LDO45_RS26590;Dbxref=GenBank:WP_012364611.1;Name=WP_012364611.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749978.1;locus_tag=LDO45_RS26590;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_012364611.1;transl_table=11 NZ_CAJZAS010000218.1 RefSeq gene 12582 13778 . + . ID=gene-LDO45_RS26595;Name=LDO45_RS26595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26595;old_locus_tag=BDI4_610015 NZ_CAJZAS010000218.1 Protein Homology CDS 12582 13778 . + 0 ID=cds-WP_223964641.1;Parent=gene-LDO45_RS26595;Dbxref=GenBank:WP_223964641.1;Name=WP_223964641.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398412.1;locus_tag=LDO45_RS26595;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_223964641.1;transl_table=11 NZ_CAJZAS010000218.1 RefSeq gene 13790 14362 . + . ID=gene-LDO45_RS26600;Name=LDO45_RS26600;end_range=14362,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26600;partial=true NZ_CAJZAS010000218.1 Protein Homology CDS 13790 14362 . + 0 ID=cds-WP_223964642.1;Parent=gene-LDO45_RS26600;Dbxref=GenBank:WP_223964642.1;Name=WP_223964642.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;end_range=14362,.;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896172.1;locus_tag=LDO45_RS26600;partial=true;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_223964642.1;transl_table=11 ##sequence-region NZ_CAJZAS010000219.1 1 84598 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000219.1 RefSeq region 1 84598 . + . ID=NZ_CAJZAS010000219.1:1..84598;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_62 NZ_CAJZAS010000219.1 RefSeq gene 1 1764 . + . ID=gene-LDO45_RS26605;Name=LDO45_RS26605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26605;old_locus_tag=BDI4_620001;partial=true;start_range=.,1 NZ_CAJZAS010000219.1 Protein Homology CDS 1 1764 . + 0 ID=cds-WP_223964643.1;Parent=gene-LDO45_RS26605;Dbxref=GenBank:WP_223964643.1;Name=WP_223964643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494734.1;locus_tag=LDO45_RS26605;partial=true;product=sulfite reductase flavoprotein subunit alpha;protein_id=WP_223964643.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 1989 2423 . + . ID=gene-LDO45_RS26610;Name=LDO45_RS26610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26610;old_locus_tag=BDI4_620002 NZ_CAJZAS010000219.1 Protein Homology CDS 1989 2423 . + 0 ID=cds-WP_223964644.1;Parent=gene-LDO45_RS26610;Dbxref=GenBank:WP_223964644.1;Name=WP_223964644.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366165.1;locus_tag=LDO45_RS26610;product=hypothetical protein;protein_id=WP_223964644.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 2817 5411 . + . ID=gene-LDO45_RS26615;Name=mprF;gbkey=Gene;gene=mprF;gene_biotype=protein_coding;locus_tag=LDO45_RS26615;old_locus_tag=BDI4_620004 NZ_CAJZAS010000219.1 Protein Homology CDS 2817 5411 . + 0 ID=cds-WP_223964645.1;Parent=gene-LDO45_RS26615;Dbxref=GenBank:WP_223964645.1;Name=WP_223964645.1;gbkey=CDS;gene=mprF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354955.1;locus_tag=LDO45_RS26615;product=bifunctional lysylphosphatidylglycerol flippase/synthetase MprF;protein_id=WP_223964645.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 5408 6673 . + . ID=gene-LDO45_RS26620;Name=LDO45_RS26620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26620;old_locus_tag=BDI4_620005 NZ_CAJZAS010000219.1 Protein Homology CDS 5408 6673 . + 0 ID=cds-WP_223964646.1;Parent=gene-LDO45_RS26620;Dbxref=GenBank:WP_223964646.1;Name=WP_223964646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216935.1;locus_tag=LDO45_RS26620;product=virulence factor family protein;protein_id=WP_223964646.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 6744 7199 . - . ID=gene-LDO45_RS26625;Name=LDO45_RS26625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26625;old_locus_tag=BDI4_620006 NZ_CAJZAS010000219.1 Protein Homology CDS 6744 7199 . - 0 ID=cds-WP_223964647.1;Parent=gene-LDO45_RS26625;Dbxref=GenBank:WP_223964647.1;Name=WP_223964647.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354957.1;locus_tag=LDO45_RS26625;product=DUF934 domain-containing protein;protein_id=WP_223964647.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 7196 8980 . - . ID=gene-LDO45_RS26630;Name=LDO45_RS26630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26630;old_locus_tag=BDI4_620007 NZ_CAJZAS010000219.1 Protein Homology CDS 7196 8980 . - 0 ID=cds-WP_223964648.1;Parent=gene-LDO45_RS26630;Dbxref=GenBank:WP_223964648.1;Name=WP_223964648.1;Ontology_term=GO:0020037,GO:0046872,GO:0050311,GO:0051539;gbkey=CDS;go_function=heme binding|0020037||IEA,metal ion binding|0046872||IEA,sulfite reductase (ferredoxin) activity|0050311||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899133.1;locus_tag=LDO45_RS26630;product=nitrite/sulfite reductase;protein_id=WP_223964648.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 9160 10593 . - . ID=gene-LDO45_RS26635;Name=LDO45_RS26635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26635;old_locus_tag=BDI4_620008 NZ_CAJZAS010000219.1 Protein Homology CDS 9160 10593 . - 0 ID=cds-WP_223964649.1;Parent=gene-LDO45_RS26635;Dbxref=GenBank:WP_223964649.1;Name=WP_223964649.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009937029.1;locus_tag=LDO45_RS26635;product=PLP-dependent aminotransferase family protein;protein_id=WP_223964649.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 10941 12065 . + . ID=gene-LDO45_RS26640;Name=LDO45_RS26640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26640;old_locus_tag=BDI4_620009 NZ_CAJZAS010000219.1 Protein Homology CDS 10941 12065 . + 0 ID=cds-WP_223964650.1;Parent=gene-LDO45_RS26640;Dbxref=GenBank:WP_223964650.1;Name=WP_223964650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760079.1;locus_tag=LDO45_RS26640;product=extracellular solute-binding protein;protein_id=WP_223964650.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 12062 13837 . + . ID=gene-LDO45_RS26645;Name=LDO45_RS26645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26645;old_locus_tag=BDI4_620010 NZ_CAJZAS010000219.1 Protein Homology CDS 12062 13837 . + 0 ID=cds-WP_223964651.1;Parent=gene-LDO45_RS26645;Dbxref=GenBank:WP_223964651.1;Name=WP_223964651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760080.1;locus_tag=LDO45_RS26645;product=diguanylate cyclase domain-containing protein;protein_id=WP_223964651.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 13936 14235 . - . ID=gene-LDO45_RS26650;Name=LDO45_RS26650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26650;old_locus_tag=BDI4_620011 NZ_CAJZAS010000219.1 Protein Homology CDS 13936 14235 . - 0 ID=cds-WP_175910074.1;Parent=gene-LDO45_RS26650;Dbxref=GenBank:WP_175910074.1;Name=WP_175910074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478947.1;locus_tag=LDO45_RS26650;product=DUF4148 domain-containing protein;protein_id=WP_175910074.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 14483 14743 . - . ID=gene-LDO45_RS26655;Name=LDO45_RS26655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26655;old_locus_tag=BDI4_620013 NZ_CAJZAS010000219.1 Protein Homology CDS 14483 14743 . - 0 ID=cds-WP_006760082.1;Parent=gene-LDO45_RS26655;Dbxref=GenBank:WP_006760082.1;Name=WP_006760082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494747.1;locus_tag=LDO45_RS26655;product=hypothetical protein;protein_id=WP_006760082.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 14822 15670 . - . ID=gene-LDO45_RS26660;Name=LDO45_RS26660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26660;old_locus_tag=BDI4_620014 NZ_CAJZAS010000219.1 Protein Homology CDS 14822 15670 . - 0 ID=cds-WP_059697717.1;Parent=gene-LDO45_RS26660;Dbxref=GenBank:WP_059697717.1;Name=WP_059697717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899145.1;locus_tag=LDO45_RS26660;product=sulfite exporter TauE/SafE family protein;protein_id=WP_059697717.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 15961 16857 . + . ID=gene-LDO45_RS26665;Name=LDO45_RS26665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26665;old_locus_tag=BDI4_620015 NZ_CAJZAS010000219.1 Protein Homology CDS 15961 16857 . + 0 ID=cds-WP_223964652.1;Parent=gene-LDO45_RS26665;Dbxref=GenBank:WP_223964652.1;Name=WP_223964652.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494749.1;locus_tag=LDO45_RS26665;product=LysR family transcriptional regulator;protein_id=WP_223964652.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 16989 17621 . + . ID=gene-LDO45_RS26670;Name=LDO45_RS26670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26670;old_locus_tag=BDI4_620016 NZ_CAJZAS010000219.1 Protein Homology CDS 16989 17621 . + 0 ID=cds-WP_059537604.1;Parent=gene-LDO45_RS26670;Dbxref=GenBank:WP_059537604.1;Name=WP_059537604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899147.1;locus_tag=LDO45_RS26670;product=LysE family translocator;protein_id=WP_059537604.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 17832 19517 . - . ID=gene-LDO45_RS26675;Name=LDO45_RS26675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26675;old_locus_tag=BDI4_620017 NZ_CAJZAS010000219.1 Protein Homology CDS 17832 19517 . - 0 ID=cds-WP_223964653.1;Parent=gene-LDO45_RS26675;Dbxref=GenBank:WP_223964653.1;Name=WP_223964653.1;Ontology_term=GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494752.1;locus_tag=LDO45_RS26675;product=metallophosphoesterase family protein;protein_id=WP_223964653.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 19814 20113 . + . ID=gene-LDO45_RS26680;Name=LDO45_RS26680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26680;old_locus_tag=BDI4_620018 NZ_CAJZAS010000219.1 Protein Homology CDS 19814 20113 . + 0 ID=cds-WP_059537612.1;Parent=gene-LDO45_RS26680;Dbxref=GenBank:WP_059537612.1;Name=WP_059537612.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366152.1;locus_tag=LDO45_RS26680;product=YXWGXW repeat-containing protein;protein_id=WP_059537612.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 20335 21078 . + . ID=gene-LDO45_RS26685;Name=LDO45_RS26685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26685;old_locus_tag=BDI4_620019 NZ_CAJZAS010000219.1 Protein Homology CDS 20335 21078 . + 0 ID=cds-WP_223964654.1;Parent=gene-LDO45_RS26685;Dbxref=GenBank:WP_223964654.1;Name=WP_223964654.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658920.1;locus_tag=LDO45_RS26685;product=RNA polymerase sigma factor;protein_id=WP_223964654.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 21075 21494 . + . ID=gene-LDO45_RS26690;Name=LDO45_RS26690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26690;old_locus_tag=BDI4_620020 NZ_CAJZAS010000219.1 Protein Homology CDS 21075 21494 . + 0 ID=cds-WP_059537616.1;Parent=gene-LDO45_RS26690;Dbxref=GenBank:WP_059537616.1;Name=WP_059537616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752758.1;locus_tag=LDO45_RS26690;product=hypothetical protein;protein_id=WP_059537616.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 21491 21994 . + . ID=gene-LDO45_RS26695;Name=LDO45_RS26695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26695;old_locus_tag=BDI4_620021 NZ_CAJZAS010000219.1 Protein Homology CDS 21491 21994 . + 0 ID=cds-WP_223964655.1;Parent=gene-LDO45_RS26695;Dbxref=GenBank:WP_223964655.1;Name=WP_223964655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494755.1;locus_tag=LDO45_RS26695;product=periplasmic heavy metal sensor;protein_id=WP_223964655.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 22140 22985 . + . ID=gene-LDO45_RS26700;Name=LDO45_RS26700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26700;old_locus_tag=BDI4_620022 NZ_CAJZAS010000219.1 Protein Homology CDS 22140 22985 . + 0 ID=cds-WP_223964656.1;Parent=gene-LDO45_RS26700;Dbxref=GenBank:WP_223964656.1;Name=WP_223964656.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018436209.1;locus_tag=LDO45_RS26700;product=GNAT family N-acetyltransferase;protein_id=WP_223964656.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 23325 24320 . + . ID=gene-LDO45_RS26705;Name=LDO45_RS26705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26705;old_locus_tag=BDI4_620023 NZ_CAJZAS010000219.1 Protein Homology CDS 23325 24320 . + 0 ID=cds-WP_223964657.1;Parent=gene-LDO45_RS26705;Dbxref=GenBank:WP_223964657.1;Name=WP_223964657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399029.1;locus_tag=LDO45_RS26705;product=hypothetical protein;protein_id=WP_223964657.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 24546 25598 . - . ID=gene-LDO45_RS26710;Name=LDO45_RS26710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26710;old_locus_tag=BDI4_620024 NZ_CAJZAS010000219.1 Protein Homology CDS 24546 25598 . - 0 ID=cds-WP_059537629.1;Parent=gene-LDO45_RS26710;Dbxref=GenBank:WP_059537629.1;Name=WP_059537629.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898665.1;locus_tag=LDO45_RS26710;product=alpha/beta fold hydrolase;protein_id=WP_059537629.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 25970 26971 . - . ID=gene-LDO45_RS26715;Name=LDO45_RS26715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26715;old_locus_tag=BDI4_620027 NZ_CAJZAS010000219.1 Protein Homology CDS 25970 26971 . - 0 ID=cds-WP_223964658.1;Parent=gene-LDO45_RS26715;Dbxref=GenBank:WP_223964658.1;Name=WP_223964658.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019142717.1;locus_tag=LDO45_RS26715;product=aldo/keto reductase;protein_id=WP_223964658.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 27050 28027 . - . ID=gene-LDO45_RS26720;Name=LDO45_RS26720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26720;old_locus_tag=BDI4_620028 NZ_CAJZAS010000219.1 Protein Homology CDS 27050 28027 . - 0 ID=cds-WP_223964659.1;Parent=gene-LDO45_RS26720;Dbxref=GenBank:WP_223964659.1;Name=WP_223964659.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013587552.1;locus_tag=LDO45_RS26720;product=oxidoreductase;protein_id=WP_223964659.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 28180 29061 . + . ID=gene-LDO45_RS26725;Name=LDO45_RS26725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26725;old_locus_tag=BDI4_620029 NZ_CAJZAS010000219.1 Protein Homology CDS 28180 29061 . + 0 ID=cds-WP_223964660.1;Parent=gene-LDO45_RS26725;Dbxref=GenBank:WP_223964660.1;Name=WP_223964660.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018431.5;locus_tag=LDO45_RS26725;product=AraC family transcriptional regulator;protein_id=WP_223964660.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 29324 30064 . + . ID=gene-LDO45_RS26730;Name=LDO45_RS26730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26730;old_locus_tag=BDI4_620031 NZ_CAJZAS010000219.1 Protein Homology CDS 29324 30064 . + 0 ID=cds-WP_308051272.1;Parent=gene-LDO45_RS26730;Dbxref=GenBank:WP_308051272.1;Name=WP_308051272.1;Ontology_term=GO:0006744,GO:0032259,GO:0008425,GO:0061542,GO:0102208;gbkey=CDS;go_function=2-polyprenyl-6-methoxy-1%2C4-benzoquinone methyltransferase activity|0008425||IEA,3-demethylubiquinol-n 3-O-methyltransferase activity|0061542||IEA,2-polyprenyl-6-hydroxyphenol methylase activity|0102208||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA,methylation|0032259||IEA;inference=COORDINATES: protein motif:HMM:NF024880.5;locus_tag=LDO45_RS26730;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_308051272.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 30061 30627 . + . ID=gene-LDO45_RS26735;Name=LDO45_RS26735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26735;old_locus_tag=BDI4_620032 NZ_CAJZAS010000219.1 Protein Homology CDS 30061 30627 . + 0 ID=cds-WP_223964661.1;Parent=gene-LDO45_RS26735;Dbxref=GenBank:WP_223964661.1;Name=WP_223964661.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549122.1;locus_tag=LDO45_RS26735;product=nucleotidyltransferase family protein;protein_id=WP_223964661.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 30708 31235 . + . ID=gene-LDO45_RS26740;Name=LDO45_RS26740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26740 NZ_CAJZAS010000219.1 Protein Homology CDS 30708 31235 . + 0 ID=cds-WP_223964662.1;Parent=gene-LDO45_RS26740;Dbxref=GenBank:WP_223964662.1;Name=WP_223964662.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024952.5;locus_tag=LDO45_RS26740;product=2'-5' RNA ligase family protein;protein_id=WP_223964662.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 31452 32846 . + . ID=gene-LDO45_RS26745;Name=LDO45_RS26745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26745;old_locus_tag=BDI4_620035 NZ_CAJZAS010000219.1 Protein Homology CDS 31452 32846 . + 0 ID=cds-WP_223964663.1;Parent=gene-LDO45_RS26745;Dbxref=GenBank:WP_223964663.1;Name=WP_223964663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494756.1;locus_tag=LDO45_RS26745;product=DUF1800 family protein;protein_id=WP_223964663.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 32849 34012 . + . ID=gene-LDO45_RS26750;Name=LDO45_RS26750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26750;old_locus_tag=BDI4_620034 NZ_CAJZAS010000219.1 Protein Homology CDS 32849 34012 . + 0 ID=cds-WP_223964664.1;Parent=gene-LDO45_RS26750;Dbxref=GenBank:WP_223964664.1;Name=WP_223964664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756006.1;locus_tag=LDO45_RS26750;product=DUF1501 domain-containing protein;protein_id=WP_223964664.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 34078 34296 . + . ID=gene-LDO45_RS26755;Name=LDO45_RS26755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26755;old_locus_tag=BDI4_620036 NZ_CAJZAS010000219.1 Protein Homology CDS 34078 34296 . + 0 ID=cds-WP_059537645.1;Parent=gene-LDO45_RS26755;Dbxref=GenBank:WP_059537645.1;Name=WP_059537645.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658913.1;locus_tag=LDO45_RS26755;product=YXWGXW repeat-containing protein;protein_id=WP_059537645.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 34318 35511 . - . ID=gene-LDO45_RS26760;Name=LDO45_RS26760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26760;old_locus_tag=BDI4_620037 NZ_CAJZAS010000219.1 Protein Homology CDS 34318 35511 . - 0 ID=cds-WP_223964665.1;Parent=gene-LDO45_RS26760;Dbxref=GenBank:WP_223964665.1;Name=WP_223964665.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899161.1;locus_tag=LDO45_RS26760;product=tyrosine-type recombinase/integrase;protein_id=WP_223964665.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 35819 36994 . - . ID=gene-LDO45_RS26765;Name=LDO45_RS26765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26765;old_locus_tag=BDI4_620038 NZ_CAJZAS010000219.1 Protein Homology CDS 35819 36994 . - 0 ID=cds-WP_223964666.1;Parent=gene-LDO45_RS26765;Dbxref=GenBank:WP_223964666.1;Name=WP_223964666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899162.1;locus_tag=LDO45_RS26765;product=helix-turn-helix transcriptional regulator;protein_id=WP_223964666.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 37236 37616 . + . ID=gene-LDO45_RS26770;Name=LDO45_RS26770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26770;old_locus_tag=BDI4_620039 NZ_CAJZAS010000219.1 Protein Homology CDS 37236 37616 . + 0 ID=cds-WP_223964667.1;Parent=gene-LDO45_RS26770;Dbxref=GenBank:WP_223964667.1;Name=WP_223964667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366143.1;locus_tag=LDO45_RS26770;product=DUF4377 domain-containing protein;protein_id=WP_223964667.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 37646 39034 . - . ID=gene-LDO45_RS26775;Name=LDO45_RS26775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26775;old_locus_tag=BDI4_620040 NZ_CAJZAS010000219.1 Protein Homology CDS 37646 39034 . - 0 ID=cds-WP_223964668.1;Parent=gene-LDO45_RS26775;Dbxref=GenBank:WP_223964668.1;Name=WP_223964668.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355013.1;locus_tag=LDO45_RS26775;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_223964668.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 39317 39667 . - . ID=gene-LDO45_RS26780;Name=LDO45_RS26780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26780;old_locus_tag=BDI4_620041 NZ_CAJZAS010000219.1 Protein Homology CDS 39317 39667 . - 0 ID=cds-WP_057925050.1;Parent=gene-LDO45_RS26780;Dbxref=GenBank:WP_057925050.1;Name=WP_057925050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754811.1;locus_tag=LDO45_RS26780;product=VOC family protein;protein_id=WP_057925050.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 39926 41065 . + . ID=gene-LDO45_RS26785;Name=LDO45_RS26785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26785;old_locus_tag=BDI4_620042 NZ_CAJZAS010000219.1 Protein Homology CDS 39926 41065 . + 0 ID=cds-WP_223964669.1;Parent=gene-LDO45_RS26785;Dbxref=GenBank:WP_223964669.1;Name=WP_223964669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493091.1;locus_tag=LDO45_RS26785;product=LLM class flavin-dependent oxidoreductase;protein_id=WP_223964669.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 41237 42430 . + . ID=gene-LDO45_RS26790;Name=LDO45_RS26790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26790;old_locus_tag=BDI4_620043 NZ_CAJZAS010000219.1 Protein Homology CDS 41237 42430 . + 0 ID=cds-WP_059691355.1;Parent=gene-LDO45_RS26790;Dbxref=GenBank:WP_059691355.1;Name=WP_059691355.1;Ontology_term=GO:0016627,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355017.1;locus_tag=LDO45_RS26790;product=acyl-CoA dehydrogenase family protein;protein_id=WP_059691355.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 42441 44198 . + . ID=gene-LDO45_RS26795;Name=LDO45_RS26795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26795;old_locus_tag=BDI4_620044 NZ_CAJZAS010000219.1 Protein Homology CDS 42441 44198 . + 0 ID=cds-WP_059819189.1;Parent=gene-LDO45_RS26795;Dbxref=GenBank:WP_059819189.1;Name=WP_059819189.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754814.1;locus_tag=LDO45_RS26795;product=FAD-dependent oxidoreductase;protein_id=WP_059819189.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 44198 44716 . + . ID=gene-LDO45_RS26800;Name=LDO45_RS26800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26800;old_locus_tag=BDI4_620045 NZ_CAJZAS010000219.1 Protein Homology CDS 44198 44716 . + 0 ID=cds-WP_059951051.1;Parent=gene-LDO45_RS26800;Dbxref=GenBank:WP_059951051.1;Name=WP_059951051.1;Ontology_term=GO:0010181,GO:0016646;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on the CH-NH group of donors%2C NAD or NADP as acceptor|0016646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483126.1;locus_tag=LDO45_RS26800;product=flavin reductase family protein;protein_id=WP_059951051.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 44754 44945 . + . ID=gene-LDO45_RS26805;Name=LDO45_RS26805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26805;old_locus_tag=BDI4_620046 NZ_CAJZAS010000219.1 GeneMarkS-2+ CDS 44754 44945 . + 0 ID=cds-WP_223964670.1;Parent=gene-LDO45_RS26805;Dbxref=GenBank:WP_223964670.1;Name=WP_223964670.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26805;product=hypothetical protein;protein_id=WP_223964670.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 44956 46005 . + . ID=gene-LDO45_RS26810;Name=LDO45_RS26810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26810;old_locus_tag=BDI4_620047 NZ_CAJZAS010000219.1 Protein Homology CDS 44956 46005 . + 0 ID=cds-WP_223964671.1;Parent=gene-LDO45_RS26810;Dbxref=GenBank:WP_223964671.1;Name=WP_223964671.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493093.1;locus_tag=LDO45_RS26810;product=ferredoxin--NADP reductase;protein_id=WP_223964671.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 46052 47638 . + . ID=gene-LDO45_RS26815;Name=LDO45_RS26815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26815;old_locus_tag=BDI4_620048 NZ_CAJZAS010000219.1 Protein Homology CDS 46052 47638 . + 0 ID=cds-WP_290371037.1;Parent=gene-LDO45_RS26815;Dbxref=GenBank:WP_290371037.1;Name=WP_290371037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481532.1;locus_tag=LDO45_RS26815;product=FadD3 family acyl-CoA ligase;protein_id=WP_290371037.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 47676 48449 . + . ID=gene-LDO45_RS26820;Name=LDO45_RS26820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26820;old_locus_tag=BDI4_620049 NZ_CAJZAS010000219.1 Protein Homology CDS 47676 48449 . + 0 ID=cds-WP_223964672.1;Parent=gene-LDO45_RS26820;Dbxref=GenBank:WP_223964672.1;Name=WP_223964672.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899174.1;locus_tag=LDO45_RS26820;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_223964672.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 49213 49836 . + . ID=gene-LDO45_RS26825;Name=LDO45_RS26825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26825;old_locus_tag=BDI4_620050 NZ_CAJZAS010000219.1 Protein Homology CDS 49213 49836 . + 0 ID=cds-WP_374109554.1;Parent=gene-LDO45_RS26825;Dbxref=GenBank:WP_374109554.1;Name=WP_374109554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007740011.1;locus_tag=LDO45_RS26825;product=hypothetical protein;protein_id=WP_374109554.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 49847 51433 . - . ID=gene-LDO45_RS26830;Name=LDO45_RS26830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26830;old_locus_tag=BDI4_620051 NZ_CAJZAS010000219.1 GeneMarkS-2+ CDS 49847 51433 . - 0 ID=cds-WP_223964674.1;Parent=gene-LDO45_RS26830;Dbxref=GenBank:WP_223964674.1;Name=WP_223964674.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS26830;product=hypothetical protein;protein_id=WP_223964674.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 51998 52894 . + . ID=gene-LDO45_RS26835;Name=LDO45_RS26835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26835;old_locus_tag=BDI4_620052 NZ_CAJZAS010000219.1 Protein Homology CDS 51998 52894 . + 0 ID=cds-WP_223964675.1;Parent=gene-LDO45_RS26835;Dbxref=GenBank:WP_223964675.1;Name=WP_223964675.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481531.1;locus_tag=LDO45_RS26835;product=VOC family protein;protein_id=WP_223964675.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 52904 53797 . + . ID=gene-LDO45_RS26840;Name=LDO45_RS26840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26840;old_locus_tag=BDI4_620053 NZ_CAJZAS010000219.1 Protein Homology CDS 52904 53797 . + 0 ID=cds-WP_059537693.1;Parent=gene-LDO45_RS26840;Dbxref=GenBank:WP_059537693.1;Name=WP_059537693.1;Ontology_term=GO:0008410;gbkey=CDS;go_function=CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329470.1;locus_tag=LDO45_RS26840;product=CoA transferase subunit A;protein_id=WP_059537693.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 53808 54605 . + . ID=gene-LDO45_RS26845;Name=LDO45_RS26845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26845;old_locus_tag=BDI4_620054 NZ_CAJZAS010000219.1 Protein Homology CDS 53808 54605 . + 0 ID=cds-WP_059691346.1;Parent=gene-LDO45_RS26845;Dbxref=GenBank:WP_059691346.1;Name=WP_059691346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481539.1;locus_tag=LDO45_RS26845;product=CoA-transferase subunit beta;protein_id=WP_059691346.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 54614 55540 . + . ID=gene-LDO45_RS26850;Name=LDO45_RS26850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26850;old_locus_tag=BDI4_620055 NZ_CAJZAS010000219.1 Protein Homology CDS 54614 55540 . + 0 ID=cds-WP_223964676.1;Parent=gene-LDO45_RS26850;Dbxref=GenBank:WP_223964676.1;Name=WP_223964676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899241.1;locus_tag=LDO45_RS26850;product=enoyl-CoA hydratase;protein_id=WP_223964676.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 55537 56622 . + . ID=gene-LDO45_RS26855;Name=LDO45_RS26855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26855;old_locus_tag=BDI4_620056 NZ_CAJZAS010000219.1 Protein Homology CDS 55537 56622 . + 0 ID=cds-WP_223964677.1;Parent=gene-LDO45_RS26855;Dbxref=GenBank:WP_223964677.1;Name=WP_223964677.1;Ontology_term=GO:0004497;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355039.1;locus_tag=LDO45_RS26855;product=nitronate monooxygenase family protein;protein_id=WP_223964677.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 56648 57457 . + . ID=gene-LDO45_RS26860;Name=LDO45_RS26860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26860;old_locus_tag=BDI4_620057 NZ_CAJZAS010000219.1 Protein Homology CDS 56648 57457 . + 0 ID=cds-WP_223964678.1;Parent=gene-LDO45_RS26860;Dbxref=GenBank:WP_223964678.1;Name=WP_223964678.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899243.1;locus_tag=LDO45_RS26860;product=enoyl-CoA hydratase family protein;protein_id=WP_223964678.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 57454 58623 . + . ID=gene-LDO45_RS26865;Name=LDO45_RS26865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26865;old_locus_tag=BDI4_620059 NZ_CAJZAS010000219.1 Protein Homology CDS 57454 58623 . + 0 ID=cds-WP_059691343.1;Parent=gene-LDO45_RS26865;Dbxref=GenBank:WP_059691343.1;Name=WP_059691343.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355041.1;locus_tag=LDO45_RS26865;product=acyl-CoA dehydrogenase family protein;protein_id=WP_059691343.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 58659 59729 . + . ID=gene-LDO45_RS26870;Name=LDO45_RS26870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26870;old_locus_tag=BDI4_620058 NZ_CAJZAS010000219.1 Protein Homology CDS 58659 59729 . + 0 ID=cds-WP_223964679.1;Parent=gene-LDO45_RS26870;Dbxref=GenBank:WP_223964679.1;Name=WP_223964679.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494774.1;locus_tag=LDO45_RS26870;product=acyl-CoA dehydrogenase family protein;protein_id=WP_223964679.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 59726 60877 . + . ID=gene-LDO45_RS26875;Name=LDO45_RS26875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26875;old_locus_tag=BDI4_620060 NZ_CAJZAS010000219.1 Protein Homology CDS 59726 60877 . + 0 ID=cds-WP_223964680.1;Parent=gene-LDO45_RS26875;Dbxref=GenBank:WP_223964680.1;Name=WP_223964680.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753818.1;locus_tag=LDO45_RS26875;product=acetyl-CoA C-acetyltransferase;protein_id=WP_223964680.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 60919 61797 . + . ID=gene-LDO45_RS26880;Name=LDO45_RS26880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26880;old_locus_tag=BDI4_620061 NZ_CAJZAS010000219.1 Protein Homology CDS 60919 61797 . + 0 ID=cds-WP_223964681.1;Parent=gene-LDO45_RS26880;Dbxref=GenBank:WP_223964681.1;Name=WP_223964681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899247.1;locus_tag=LDO45_RS26880;product=SDR family oxidoreductase;protein_id=WP_223964681.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 61801 63042 . + . ID=gene-LDO45_RS26885;Name=LDO45_RS26885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26885;old_locus_tag=BDI4_620063 NZ_CAJZAS010000219.1 Protein Homology CDS 61801 63042 . + 0 ID=cds-WP_223964682.1;Parent=gene-LDO45_RS26885;Dbxref=GenBank:WP_223964682.1;Name=WP_223964682.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494777.1;locus_tag=LDO45_RS26885;product=acyl-CoA dehydrogenase family protein;protein_id=WP_223964682.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 63039 64238 . + . ID=gene-LDO45_RS26890;Name=LDO45_RS26890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26890;old_locus_tag=BDI4_620062 NZ_CAJZAS010000219.1 Protein Homology CDS 63039 64238 . + 0 ID=cds-WP_223964683.1;Parent=gene-LDO45_RS26890;Dbxref=GenBank:WP_223964683.1;Name=WP_223964683.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481541.1;locus_tag=LDO45_RS26890;product=acyl-CoA dehydrogenase family protein;protein_id=WP_223964683.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 64235 65035 . + . ID=gene-LDO45_RS26895;Name=LDO45_RS26895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26895;old_locus_tag=BDI4_620064 NZ_CAJZAS010000219.1 Protein Homology CDS 64235 65035 . + 0 ID=cds-WP_059819174.1;Parent=gene-LDO45_RS26895;Dbxref=GenBank:WP_059819174.1;Name=WP_059819174.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481546.1;locus_tag=LDO45_RS26895;product=SDR family oxidoreductase;protein_id=WP_059819174.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 65035 65520 . + . ID=gene-LDO45_RS26900;Name=LDO45_RS26900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26900;old_locus_tag=BDI4_620065 NZ_CAJZAS010000219.1 Protein Homology CDS 65035 65520 . + 0 ID=cds-WP_223964696.1;Parent=gene-LDO45_RS26900;Dbxref=GenBank:WP_223964696.1;Name=WP_223964696.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481528.1;locus_tag=LDO45_RS26900;product=MaoC family dehydratase;protein_id=WP_223964696.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 65538 66743 . + . ID=gene-LDO45_RS26905;Name=LDO45_RS26905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26905;old_locus_tag=BDI4_620066 NZ_CAJZAS010000219.1 Protein Homology CDS 65538 66743 . + 0 ID=cds-WP_223964684.1;Parent=gene-LDO45_RS26905;Dbxref=GenBank:WP_223964684.1;Name=WP_223964684.1;Ontology_term=GO:0006631,GO:0003985;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755707.1;locus_tag=LDO45_RS26905;product=acetyl-CoA C-acyltransferase;protein_id=WP_223964684.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 66921 67880 . + . ID=gene-LDO45_RS26910;Name=LDO45_RS26910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26910;old_locus_tag=BDI4_620068 NZ_CAJZAS010000219.1 Protein Homology CDS 66921 67880 . + 0 ID=cds-WP_223964685.1;Parent=gene-LDO45_RS26910;Dbxref=GenBank:WP_223964685.1;Name=WP_223964685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482823.1;locus_tag=LDO45_RS26910;product=sialidase;protein_id=WP_223964685.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 67983 70454 . + . ID=gene-LDO45_RS26915;Name=LDO45_RS26915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26915;old_locus_tag=BDI4_620069 NZ_CAJZAS010000219.1 Protein Homology CDS 67983 70454 . + 0 ID=cds-WP_223964686.1;Parent=gene-LDO45_RS26915;Dbxref=GenBank:WP_223964686.1;Name=WP_223964686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899254.1;locus_tag=LDO45_RS26915;product=RND family transporter;protein_id=WP_223964686.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 70523 71602 . + . ID=gene-LDO45_RS26920;Name=LDO45_RS26920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26920;old_locus_tag=BDI4_620067 NZ_CAJZAS010000219.1 Protein Homology CDS 70523 71602 . + 0 ID=cds-WP_223964687.1;Parent=gene-LDO45_RS26920;Dbxref=GenBank:WP_223964687.1;Name=WP_223964687.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899255.1;locus_tag=LDO45_RS26920;product=Rieske 2Fe-2S domain-containing protein;protein_id=WP_223964687.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 71893 72096 . + . ID=gene-LDO45_RS26925;Name=LDO45_RS26925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26925;old_locus_tag=BDI4_620070 NZ_CAJZAS010000219.1 Protein Homology CDS 71893 72096 . + 0 ID=cds-WP_006751843.1;Parent=gene-LDO45_RS26925;Dbxref=GenBank:WP_006751843.1;Name=WP_006751843.1;Ontology_term=GO:0001072,GO:0003676,GO:0003723,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,nucleic acid binding|0003676||IEA,RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329453.1;locus_tag=LDO45_RS26925;product=cold-shock protein;protein_id=WP_006751843.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 72559 72822 . + . ID=gene-LDO45_RS26930;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=LDO45_RS26930;old_locus_tag=BDI4_620071 NZ_CAJZAS010000219.1 Protein Homology CDS 72559 72822 . + 0 ID=cds-WP_011355053.1;Parent=gene-LDO45_RS26930;Dbxref=GenBank:WP_011355053.1;Name=WP_011355053.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483034.1;locus_tag=LDO45_RS26930;product=translation initiation factor IF-1;protein_id=WP_011355053.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 73236 74501 . + . ID=gene-LDO45_RS26935;Name=LDO45_RS26935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26935;old_locus_tag=BDI4_620072 NZ_CAJZAS010000219.1 Protein Homology CDS 73236 74501 . + 0 ID=cds-WP_223964688.1;Parent=gene-LDO45_RS26935;Dbxref=GenBank:WP_223964688.1;Name=WP_223964688.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547640.1;locus_tag=LDO45_RS26935;product=alkaline phosphatase family protein;protein_id=WP_223964688.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 74498 74746 . + . ID=gene-LDO45_RS26940;Name=LDO45_RS26940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26940;old_locus_tag=BDI4_620073 NZ_CAJZAS010000219.1 Protein Homology CDS 74498 74746 . + 0 ID=cds-WP_059691331.1;Parent=gene-LDO45_RS26940;Dbxref=GenBank:WP_059691331.1;Name=WP_059691331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547641.1;locus_tag=LDO45_RS26940;product=hypothetical protein;protein_id=WP_059691331.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 74844 75884 . - . ID=gene-LDO45_RS26945;Name=dmpG;gbkey=Gene;gene=dmpG;gene_biotype=protein_coding;locus_tag=LDO45_RS26945;old_locus_tag=BDI4_620074 NZ_CAJZAS010000219.1 Protein Homology CDS 74844 75884 . - 0 ID=cds-WP_059691330.1;Parent=gene-LDO45_RS26945;Dbxref=GenBank:WP_059691330.1;Name=WP_059691330.1;Ontology_term=GO:0009056,GO:0008701;gbkey=CDS;gene=dmpG;go_function=4-hydroxy-2-oxovalerate aldolase activity|0008701||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003078246.1;locus_tag=LDO45_RS26945;product=4-hydroxy-2-oxovalerate aldolase;protein_id=WP_059691330.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 75901 76800 . - . ID=gene-LDO45_RS26950;Name=LDO45_RS26950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26950;old_locus_tag=BDI4_620075 NZ_CAJZAS010000219.1 Protein Homology CDS 75901 76800 . - 0 ID=cds-WP_223964689.1;Parent=gene-LDO45_RS26950;Dbxref=GenBank:WP_223964689.1;Name=WP_223964689.1;Ontology_term=GO:0009056,GO:0008774;gbkey=CDS;go_function=acetaldehyde dehydrogenase (acetylating) activity|0008774||IEA;go_process=catabolic process|0009056||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899268.1;locus_tag=LDO45_RS26950;product=acetaldehyde dehydrogenase (acetylating);protein_id=WP_223964689.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 76814 77596 . - . ID=gene-LDO45_RS26955;Name=dmpE;gbkey=Gene;gene=dmpE;gene_biotype=protein_coding;locus_tag=LDO45_RS26955;old_locus_tag=BDI4_620076 NZ_CAJZAS010000219.1 Protein Homology CDS 76814 77596 . - 0 ID=cds-WP_059697650.1;Parent=gene-LDO45_RS26955;Dbxref=GenBank:WP_059697650.1;Name=WP_059697650.1;Ontology_term=GO:0008684;gbkey=CDS;gene=dmpE;go_function=2-oxopent-4-enoate hydratase activity|0008684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494786.1;locus_tag=LDO45_RS26955;product=2-oxopent-4-enoate hydratase;protein_id=WP_059697650.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 77695 79077 . - . ID=gene-LDO45_RS26960;Name=LDO45_RS26960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26960;old_locus_tag=BDI4_620077 NZ_CAJZAS010000219.1 Protein Homology CDS 77695 79077 . - 0 ID=cds-WP_223964690.1;Parent=gene-LDO45_RS26960;Dbxref=GenBank:WP_223964690.1;Name=WP_223964690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483040.1;locus_tag=LDO45_RS26960;product=DUF1329 domain-containing protein;protein_id=WP_223964690.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 79119 80684 . - . ID=gene-LDO45_RS26965;Name=LDO45_RS26965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26965;old_locus_tag=BDI4_620078 NZ_CAJZAS010000219.1 Protein Homology CDS 79119 80684 . - 0 ID=cds-WP_223964691.1;Parent=gene-LDO45_RS26965;Dbxref=GenBank:WP_223964691.1;Name=WP_223964691.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494789.1;locus_tag=LDO45_RS26965;product=DUF1302 domain-containing protein;protein_id=WP_223964691.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 80834 81613 . - . ID=gene-LDO45_RS26970;Name=LDO45_RS26970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26970;old_locus_tag=BDI4_620079 NZ_CAJZAS010000219.1 Protein Homology CDS 80834 81613 . - 0 ID=cds-WP_223964692.1;Parent=gene-LDO45_RS26970;Dbxref=GenBank:WP_223964692.1;Name=WP_223964692.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899272.1;locus_tag=LDO45_RS26970;product=SDR family oxidoreductase;protein_id=WP_223964692.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 81752 82597 . + . ID=gene-LDO45_RS26975;Name=LDO45_RS26975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26975;old_locus_tag=BDI4_620080 NZ_CAJZAS010000219.1 Protein Homology CDS 81752 82597 . + 0 ID=cds-WP_223964693.1;Parent=gene-LDO45_RS26975;Dbxref=GenBank:WP_223964693.1;Name=WP_223964693.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899273.1;locus_tag=LDO45_RS26975;product=alpha/beta fold hydrolase;protein_id=WP_223964693.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 82660 83448 . + . ID=gene-LDO45_RS26980;Name=LDO45_RS26980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26980;old_locus_tag=BDI4_620081 NZ_CAJZAS010000219.1 Protein Homology CDS 82660 83448 . + 0 ID=cds-WP_059537782.1;Parent=gene-LDO45_RS26980;Dbxref=GenBank:WP_059537782.1;Name=WP_059537782.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751833.1;locus_tag=LDO45_RS26980;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_059537782.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq gene 83487 84236 . + . ID=gene-LDO45_RS26985;Name=LDO45_RS26985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26985;old_locus_tag=BDI4_620082 NZ_CAJZAS010000219.1 Protein Homology CDS 83487 84236 . + 0 ID=cds-WP_223964694.1;Parent=gene-LDO45_RS26985;Dbxref=GenBank:WP_223964694.1;Name=WP_223964694.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189750.1;locus_tag=LDO45_RS26985;product=electron transfer flavoprotein subunit beta/FixA family protein;protein_id=WP_223964694.1;transl_table=11 NZ_CAJZAS010000219.1 RefSeq pseudogene 84253 84598 . + . ID=gene-LDO45_RS26990;Name=LDO45_RS26990;end_range=84598,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS26990;partial=true;pseudo=true NZ_CAJZAS010000219.1 Protein Homology CDS 84253 84598 . + 0 ID=cds-LDO45_RS26990;Parent=gene-LDO45_RS26990;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=84598,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189890.1;locus_tag=LDO45_RS26990;partial=true;product=electron transfer flavoprotein subunit alpha/FixB family protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000220.1 1 135635 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000220.1 RefSeq region 1 135635 . + . ID=NZ_CAJZAS010000220.1:1..135635;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_63 NZ_CAJZAS010000220.1 RefSeq gene 1 182 . + . ID=gene-LDO45_RS26995;Name=LDO45_RS26995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS26995;old_locus_tag=BDI4_630001;partial=true;start_range=.,1 NZ_CAJZAS010000220.1 Protein Homology CDS 1 182 . + 2 ID=cds-WP_223964697.1;Parent=gene-LDO45_RS26995;Dbxref=GenBank:WP_223964697.1;Name=WP_223964697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396684.1;locus_tag=LDO45_RS26995;partial=true;product=DUF3156 family protein;protein_id=WP_223964697.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 242 1180 . + . ID=gene-LDO45_RS27000;Name=LDO45_RS27000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27000;old_locus_tag=BDI4_630002 NZ_CAJZAS010000220.1 Protein Homology CDS 242 1180 . + 0 ID=cds-WP_059527184.1;Parent=gene-LDO45_RS27000;Dbxref=GenBank:WP_059527184.1;Name=WP_059527184.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760759.1;locus_tag=LDO45_RS27000;product=helix-turn-helix domain-containing protein;protein_id=WP_059527184.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 1352 2560 . + . ID=gene-LDO45_RS27005;Name=LDO45_RS27005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27005;old_locus_tag=BDI4_630003 NZ_CAJZAS010000220.1 Protein Homology CDS 1352 2560 . + 0 ID=cds-WP_223964698.1;Parent=gene-LDO45_RS27005;Dbxref=GenBank:WP_223964698.1;Name=WP_223964698.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411591.1;locus_tag=LDO45_RS27005;product=porin;protein_id=WP_223964698.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 2749 3987 . + . ID=gene-LDO45_RS27010;Name=LDO45_RS27010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27010;old_locus_tag=BDI4_630004 NZ_CAJZAS010000220.1 Protein Homology CDS 2749 3987 . + 0 ID=cds-WP_059526600.1;Parent=gene-LDO45_RS27010;Dbxref=GenBank:WP_059526600.1;Name=WP_059526600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480924.1;locus_tag=LDO45_RS27010;product=ABC transporter substrate-binding protein;protein_id=WP_059526600.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 4022 4891 . + . ID=gene-LDO45_RS27015;Name=LDO45_RS27015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27015;old_locus_tag=BDI4_630005 NZ_CAJZAS010000220.1 Protein Homology CDS 4022 4891 . + 0 ID=cds-WP_059819375.1;Parent=gene-LDO45_RS27015;Dbxref=GenBank:WP_059819375.1;Name=WP_059819375.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480925.1;locus_tag=LDO45_RS27015;product=carbohydrate ABC transporter permease;protein_id=WP_059819375.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 4888 5748 . + . ID=gene-LDO45_RS27020;Name=LDO45_RS27020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27020;old_locus_tag=BDI4_630006 NZ_CAJZAS010000220.1 Protein Homology CDS 4888 5748 . + 0 ID=cds-WP_223964699.1;Parent=gene-LDO45_RS27020;Dbxref=GenBank:WP_223964699.1;Name=WP_223964699.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547367.1;locus_tag=LDO45_RS27020;product=carbohydrate ABC transporter permease;protein_id=WP_223964699.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 5758 6780 . - . ID=gene-LDO45_RS27025;Name=LDO45_RS27025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27025;old_locus_tag=BDI4_630007 NZ_CAJZAS010000220.1 Protein Homology CDS 5758 6780 . - 0 ID=cds-WP_223964700.1;Parent=gene-LDO45_RS27025;Dbxref=GenBank:WP_223964700.1;Name=WP_223964700.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659146.1;locus_tag=LDO45_RS27025;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_223964700.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 6787 7719 . + . ID=gene-LDO45_RS27030;Name=LDO45_RS27030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27030;old_locus_tag=BDI4_630008 NZ_CAJZAS010000220.1 Protein Homology CDS 6787 7719 . + 0 ID=cds-WP_223964701.1;Parent=gene-LDO45_RS27030;Dbxref=GenBank:WP_223964701.1;Name=WP_223964701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547369.1;locus_tag=LDO45_RS27030;product=phosphatidylinositol-specific phospholipase C;protein_id=WP_223964701.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 7969 8397 . + . ID=gene-LDO45_RS27035;Name=LDO45_RS27035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27035;old_locus_tag=BDI4_630009 NZ_CAJZAS010000220.1 Protein Homology CDS 7969 8397 . + 0 ID=cds-WP_059526591.1;Parent=gene-LDO45_RS27035;Dbxref=GenBank:WP_059526591.1;Name=WP_059526591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659144.1;locus_tag=LDO45_RS27035;product=hypothetical protein;protein_id=WP_059526591.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 8489 9100 . - . ID=gene-LDO45_RS27040;Name=LDO45_RS27040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27040;old_locus_tag=BDI4_630010 NZ_CAJZAS010000220.1 Protein Homology CDS 8489 9100 . - 0 ID=cds-WP_223964702.1;Parent=gene-LDO45_RS27040;Dbxref=GenBank:WP_223964702.1;Name=WP_223964702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760511.1;locus_tag=LDO45_RS27040;product=LysE family translocator;protein_id=WP_223964702.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 9184 9711 . + . ID=gene-LDO45_RS27045;Name=LDO45_RS27045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27045;old_locus_tag=BDI4_630011 NZ_CAJZAS010000220.1 Protein Homology CDS 9184 9711 . + 0 ID=cds-WP_223964703.1;Parent=gene-LDO45_RS27045;Dbxref=GenBank:WP_223964703.1;Name=WP_223964703.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484423.1;locus_tag=LDO45_RS27045;product=GNAT family N-acetyltransferase;protein_id=WP_223964703.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 9727 10788 . - . ID=gene-LDO45_RS27050;Name=LDO45_RS27050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27050;old_locus_tag=BDI4_630012 NZ_CAJZAS010000220.1 Protein Homology CDS 9727 10788 . - 0 ID=cds-WP_059692180.1;Parent=gene-LDO45_RS27050;Dbxref=GenBank:WP_059692180.1;Name=WP_059692180.1;Ontology_term=GO:0010181,GO:0016491;gbkey=CDS;go_function=FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602739.1;locus_tag=LDO45_RS27050;product=alkene reductase;protein_id=WP_059692180.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 10860 11168 . - . ID=gene-LDO45_RS27055;Name=LDO45_RS27055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27055;old_locus_tag=BDI4_630013 NZ_CAJZAS010000220.1 Protein Homology CDS 10860 11168 . - 0 ID=cds-WP_044846683.1;Parent=gene-LDO45_RS27055;Dbxref=GenBank:WP_044846683.1;Name=WP_044846683.1;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898858.1;locus_tag=LDO45_RS27055;product=helix-turn-helix transcriptional regulator;protein_id=WP_044846683.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 11313 12212 . - . ID=gene-LDO45_RS27060;Name=gcvA;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=LDO45_RS27060;old_locus_tag=BDI4_630014 NZ_CAJZAS010000220.1 Protein Homology CDS 11313 12212 . - 0 ID=cds-WP_059692181.1;Parent=gene-LDO45_RS27060;Dbxref=GenBank:WP_059692181.1;Name=WP_059692181.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=gcvA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882553.1;locus_tag=LDO45_RS27060;product=transcriptional regulator GcvA;protein_id=WP_059692181.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 12334 13038 . + . ID=gene-LDO45_RS27065;Name=LDO45_RS27065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27065;old_locus_tag=BDI4_630015 NZ_CAJZAS010000220.1 Protein Homology CDS 12334 13038 . + 0 ID=cds-WP_223964704.1;Parent=gene-LDO45_RS27065;Dbxref=GenBank:WP_223964704.1;Name=WP_223964704.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404426.1;locus_tag=LDO45_RS27065;product=SDR family oxidoreductase;protein_id=WP_223964704.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 13068 14207 . - . ID=gene-LDO45_RS27070;Name=LDO45_RS27070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27070;old_locus_tag=BDI4_630016 NZ_CAJZAS010000220.1 Protein Homology CDS 13068 14207 . - 0 ID=cds-WP_223964705.1;Parent=gene-LDO45_RS27070;Dbxref=GenBank:WP_223964705.1;Name=WP_223964705.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753646.1;locus_tag=LDO45_RS27070;product=patatin-like phospholipase family protein;protein_id=WP_223964705.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 14324 14665 . - . ID=gene-LDO45_RS27075;Name=LDO45_RS27075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27075;old_locus_tag=BDI4_630017 NZ_CAJZAS010000220.1 Protein Homology CDS 14324 14665 . - 0 ID=cds-WP_059692210.1;Parent=gene-LDO45_RS27075;Dbxref=GenBank:WP_059692210.1;Name=WP_059692210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753645.1;locus_tag=LDO45_RS27075;product=cupredoxin family copper-binding protein;protein_id=WP_059692210.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 14689 15633 . - . ID=gene-LDO45_RS27080;Name=LDO45_RS27080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27080;old_locus_tag=BDI4_630018 NZ_CAJZAS010000220.1 Protein Homology CDS 14689 15633 . - 0 ID=cds-WP_059692184.1;Parent=gene-LDO45_RS27080;Dbxref=GenBank:WP_059692184.1;Name=WP_059692184.1;Ontology_term=GO:0042578,GO:0046872;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547381.1;locus_tag=LDO45_RS27080;product=metallophosphoesterase;protein_id=WP_059692184.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 15889 16113 . + . ID=gene-LDO45_RS27085;Name=LDO45_RS27085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27085;old_locus_tag=BDI4_630020 NZ_CAJZAS010000220.1 GeneMarkS-2+ CDS 15889 16113 . + 0 ID=cds-WP_223964706.1;Parent=gene-LDO45_RS27085;Dbxref=GenBank:WP_223964706.1;Name=WP_223964706.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS27085;product=phosphate transporter;protein_id=WP_223964706.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 16194 17948 . + . ID=gene-LDO45_RS27090;Name=LDO45_RS27090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27090;old_locus_tag=BDI4_630021 NZ_CAJZAS010000220.1 Protein Homology CDS 16194 17948 . + 0 ID=cds-WP_223964707.1;Parent=gene-LDO45_RS27090;Dbxref=GenBank:WP_223964707.1;Name=WP_223964707.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892433.1;locus_tag=LDO45_RS27090;product=ABC transporter permease subunit;protein_id=WP_223964707.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 17960 19306 . + . ID=gene-LDO45_RS27095;Name=LDO45_RS27095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27095;old_locus_tag=BDI4_630019 NZ_CAJZAS010000220.1 Protein Homology CDS 17960 19306 . + 0 ID=cds-WP_223964708.1;Parent=gene-LDO45_RS27095;Dbxref=GenBank:WP_223964708.1;Name=WP_223964708.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484429.1;locus_tag=LDO45_RS27095;product=AAA-associated domain-containing protein;protein_id=WP_223964708.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 19334 20212 . - . ID=gene-LDO45_RS27100;Name=LDO45_RS27100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27100;old_locus_tag=BDI4_630022 NZ_CAJZAS010000220.1 Protein Homology CDS 19334 20212 . - 0 ID=cds-WP_059526560.1;Parent=gene-LDO45_RS27100;Dbxref=GenBank:WP_059526560.1;Name=WP_059526560.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882548.1;locus_tag=LDO45_RS27100;product=MurR/RpiR family transcriptional regulator;protein_id=WP_059526560.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 20556 22307 . + . ID=gene-LDO45_RS27105;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=LDO45_RS27105;old_locus_tag=BDI4_630023 NZ_CAJZAS010000220.1 Protein Homology CDS 20556 22307 . + 0 ID=cds-WP_059526557.1;Parent=gene-LDO45_RS27105;Dbxref=GenBank:WP_059526557.1;Name=WP_059526557.1;Ontology_term=GO:0006750,GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione biosynthetic process|0006750||IEA,glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760501.1;locus_tag=LDO45_RS27105;product=gamma-glutamyltransferase;protein_id=WP_059526557.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 22538 23866 . + . ID=gene-LDO45_RS27110;Name=LDO45_RS27110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27110;old_locus_tag=BDI4_630024 NZ_CAJZAS010000220.1 Protein Homology CDS 22538 23866 . + 0 ID=cds-WP_059526554.1;Parent=gene-LDO45_RS27110;Dbxref=GenBank:WP_059526554.1;Name=WP_059526554.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766172.1;locus_tag=LDO45_RS27110;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_059526554.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 23863 24252 . - . ID=gene-LDO45_RS27115;Name=LDO45_RS27115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27115;old_locus_tag=BDI4_630025 NZ_CAJZAS010000220.1 Protein Homology CDS 23863 24252 . - 0 ID=cds-WP_059526553.1;Parent=gene-LDO45_RS27115;Dbxref=GenBank:WP_059526553.1;Name=WP_059526553.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762528.1;locus_tag=LDO45_RS27115;product=DUF3331 domain-containing protein;protein_id=WP_059526553.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 24297 25589 . - . ID=gene-LDO45_RS27120;Name=LDO45_RS27120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27120;old_locus_tag=BDI4_630027 NZ_CAJZAS010000220.1 Protein Homology CDS 24297 25589 . - 0 ID=cds-WP_059526550.1;Parent=gene-LDO45_RS27120;Dbxref=GenBank:WP_059526550.1;Name=WP_059526550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547388.1;locus_tag=LDO45_RS27120;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_059526550.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 25738 26391 . + . ID=gene-LDO45_RS27125;Name=LDO45_RS27125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27125;old_locus_tag=BDI4_630028 NZ_CAJZAS010000220.1 Protein Homology CDS 25738 26391 . + 0 ID=cds-WP_059527170.1;Parent=gene-LDO45_RS27125;Dbxref=GenBank:WP_059527170.1;Name=WP_059527170.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898884.1;locus_tag=LDO45_RS27125;product=TetR/AcrR family transcriptional regulator;protein_id=WP_059527170.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq pseudogene 26414 26542 . - . ID=gene-LDO45_RS27130;Name=LDO45_RS27130;end_range=26542,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS27130;partial=true;pseudo=true NZ_CAJZAS010000220.1 Protein Homology CDS 26414 26542 . - 0 ID=cds-LDO45_RS27130;Parent=gene-LDO45_RS27130;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=26542,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752590.1;locus_tag=LDO45_RS27130;partial=true;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 26538 27014 . - . ID=gene-LDO45_RS27135;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=LDO45_RS27135;old_locus_tag=BDI4_630029 NZ_CAJZAS010000220.1 Protein Homology CDS 26538 27014 . - 0 ID=cds-WP_059526547.1;Parent=gene-LDO45_RS27135;Dbxref=GenBank:WP_059526547.1;Name=WP_059526547.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752588.1;locus_tag=LDO45_RS27135;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_059526547.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 27094 28308 . + . ID=gene-LDO45_RS27140;Name=LDO45_RS27140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27140;old_locus_tag=BDI4_630030 NZ_CAJZAS010000220.1 Protein Homology CDS 27094 28308 . + 0 ID=cds-WP_223964709.1;Parent=gene-LDO45_RS27140;Dbxref=GenBank:WP_223964709.1;Name=WP_223964709.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409853.1;locus_tag=LDO45_RS27140;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_223964709.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 28322 31495 . + . ID=gene-LDO45_RS27145;Name=LDO45_RS27145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27145;old_locus_tag=BDI4_630031 NZ_CAJZAS010000220.1 Protein Homology CDS 28322 31495 . + 0 ID=cds-WP_223964710.1;Parent=gene-LDO45_RS27145;Dbxref=GenBank:WP_223964710.1;Name=WP_223964710.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752586.1;locus_tag=LDO45_RS27145;product=efflux RND transporter permease subunit;protein_id=WP_223964710.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 31492 32988 . + . ID=gene-LDO45_RS27150;Name=LDO45_RS27150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27150;old_locus_tag=BDI4_630032 NZ_CAJZAS010000220.1 Protein Homology CDS 31492 32988 . + 0 ID=cds-WP_223964711.1;Parent=gene-LDO45_RS27150;Dbxref=GenBank:WP_223964711.1;Name=WP_223964711.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493447.1;locus_tag=LDO45_RS27150;product=efflux transporter outer membrane subunit;protein_id=WP_223964711.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 33309 34826 . + . ID=gene-LDO45_RS27155;Name=LDO45_RS27155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27155;old_locus_tag=BDI4_630033 NZ_CAJZAS010000220.1 Protein Homology CDS 33309 34826 . + 0 ID=cds-WP_223964712.1;Parent=gene-LDO45_RS27155;Dbxref=GenBank:WP_223964712.1;Name=WP_223964712.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486042.1;locus_tag=LDO45_RS27155;product=cytosine permease;protein_id=WP_223964712.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 34965 35720 . - . ID=gene-LDO45_RS27160;Name=LDO45_RS27160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27160;old_locus_tag=BDI4_630034 NZ_CAJZAS010000220.1 Protein Homology CDS 34965 35720 . - 0 ID=cds-WP_223964713.1;Parent=gene-LDO45_RS27160;Dbxref=GenBank:WP_223964713.1;Name=WP_223964713.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366344.1;locus_tag=LDO45_RS27160;product=glucose 1-dehydrogenase;protein_id=WP_223964713.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 35761 36294 . - . ID=gene-LDO45_RS27165;Name=LDO45_RS27165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27165;old_locus_tag=BDI4_630035 NZ_CAJZAS010000220.1 Protein Homology CDS 35761 36294 . - 0 ID=cds-WP_223964714.1;Parent=gene-LDO45_RS27165;Dbxref=GenBank:WP_223964714.1;Name=WP_223964714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496903.1;locus_tag=LDO45_RS27165;product=VOC family protein;protein_id=WP_223964714.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 36448 36633 . + . ID=gene-LDO45_RS27170;Name=LDO45_RS27170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27170;old_locus_tag=BDI4_630036 NZ_CAJZAS010000220.1 GeneMarkS-2+ CDS 36448 36633 . + 0 ID=cds-WP_223964715.1;Parent=gene-LDO45_RS27170;Dbxref=GenBank:WP_223964715.1;Name=WP_223964715.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS27170;product=hypothetical protein;protein_id=WP_223964715.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 36843 37454 . + . ID=gene-LDO45_RS27175;Name=LDO45_RS27175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27175;old_locus_tag=BDI4_630037 NZ_CAJZAS010000220.1 Protein Homology CDS 36843 37454 . + 0 ID=cds-WP_223964716.1;Parent=gene-LDO45_RS27175;Dbxref=GenBank:WP_223964716.1;Name=WP_223964716.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216769.1;locus_tag=LDO45_RS27175;product=cysteine hydrolase family protein;protein_id=WP_223964716.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 37607 38083 . - . ID=gene-LDO45_RS27180;Name=LDO45_RS27180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27180;old_locus_tag=BDI4_630039 NZ_CAJZAS010000220.1 Protein Homology CDS 37607 38083 . - 0 ID=cds-WP_223964717.1;Parent=gene-LDO45_RS27180;Dbxref=GenBank:WP_223964717.1;Name=WP_223964717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898900.1;locus_tag=LDO45_RS27180;product=nuclear transport factor 2 family protein;protein_id=WP_223964717.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 38337 38723 . + . ID=gene-LDO45_RS27185;Name=LDO45_RS27185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27185;old_locus_tag=BDI4_630040 NZ_CAJZAS010000220.1 Protein Homology CDS 38337 38723 . + 0 ID=cds-WP_223964765.1;Parent=gene-LDO45_RS27185;Dbxref=GenBank:WP_223964765.1;Name=WP_223964765.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496910.1;locus_tag=LDO45_RS27185;product=helix-turn-helix domain-containing protein;protein_id=WP_223964765.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 39011 39385 . - . ID=gene-LDO45_RS27190;Name=LDO45_RS27190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27190;old_locus_tag=BDI4_630041 NZ_CAJZAS010000220.1 Protein Homology CDS 39011 39385 . - 0 ID=cds-WP_082750667.1;Parent=gene-LDO45_RS27190;Dbxref=GenBank:WP_082750667.1;Name=WP_082750667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752581.1;locus_tag=LDO45_RS27190;product=YXWGXW repeat-containing protein;protein_id=WP_082750667.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 39998 41080 . + . ID=gene-LDO45_RS27195;Name=LDO45_RS27195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27195;old_locus_tag=BDI4_630043 NZ_CAJZAS010000220.1 Protein Homology CDS 39998 41080 . + 0 ID=cds-WP_223964718.1;Parent=gene-LDO45_RS27195;Dbxref=GenBank:WP_223964718.1;Name=WP_223964718.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017328963.1;locus_tag=LDO45_RS27195;product=porin;protein_id=WP_223964718.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 41256 41654 . - . ID=gene-LDO45_RS27200;Name=LDO45_RS27200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27200;old_locus_tag=BDI4_630044 NZ_CAJZAS010000220.1 Protein Homology CDS 41256 41654 . - 0 ID=cds-WP_059526516.1;Parent=gene-LDO45_RS27200;Dbxref=GenBank:WP_059526516.1;Name=WP_059526516.1;Ontology_term=GO:0032784,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761842.1;locus_tag=LDO45_RS27200;product=GreA/GreB family elongation factor;protein_id=WP_059526516.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 42168 42497 . + . ID=gene-LDO45_RS27205;Name=LDO45_RS27205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27205;old_locus_tag=BDI4_630046 NZ_CAJZAS010000220.1 Protein Homology CDS 42168 42497 . + 0 ID=cds-WP_059526514.1;Parent=gene-LDO45_RS27205;Dbxref=GenBank:WP_059526514.1;Name=WP_059526514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496913.1;locus_tag=LDO45_RS27205;product=DUF4148 domain-containing protein;protein_id=WP_059526514.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 42651 43112 . - . ID=gene-LDO45_RS27210;Name=LDO45_RS27210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27210;old_locus_tag=BDI4_630047 NZ_CAJZAS010000220.1 Protein Homology CDS 42651 43112 . - 0 ID=cds-WP_059468448.1;Parent=gene-LDO45_RS27210;Dbxref=GenBank:WP_059468448.1;Name=WP_059468448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486040.1;locus_tag=LDO45_RS27210;product=CBS domain-containing protein;protein_id=WP_059468448.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 43290 43940 . + . ID=gene-LDO45_RS27215;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=LDO45_RS27215;old_locus_tag=BDI4_630048 NZ_CAJZAS010000220.1 Protein Homology CDS 43290 43940 . + 0 ID=cds-WP_059468449.1;Parent=gene-LDO45_RS27215;Dbxref=GenBank:WP_059468449.1;Name=WP_059468449.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195483.1;locus_tag=LDO45_RS27215;product=GTP cyclohydrolase II;protein_id=WP_059468449.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 44117 44686 . + . ID=gene-LDO45_RS27220;Name=LDO45_RS27220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27220;old_locus_tag=BDI4_630049 NZ_CAJZAS010000220.1 Protein Homology CDS 44117 44686 . + 0 ID=cds-WP_223964719.1;Parent=gene-LDO45_RS27220;Dbxref=GenBank:WP_223964719.1;Name=WP_223964719.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898908.1;locus_tag=LDO45_RS27220;product=GNAT family N-acetyltransferase;protein_id=WP_223964719.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 44708 44956 . - . ID=gene-LDO45_RS27225;Name=LDO45_RS27225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27225;old_locus_tag=BDI4_630050 NZ_CAJZAS010000220.1 GeneMarkS-2+ CDS 44708 44956 . - 0 ID=cds-WP_223964720.1;Parent=gene-LDO45_RS27225;Dbxref=GenBank:WP_223964720.1;Name=WP_223964720.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS27225;product=hypothetical protein;protein_id=WP_223964720.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 45172 45933 . - . ID=gene-LDO45_RS27230;Name=LDO45_RS27230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27230;old_locus_tag=BDI4_630051 NZ_CAJZAS010000220.1 Protein Homology CDS 45172 45933 . - 0 ID=cds-WP_223964721.1;Parent=gene-LDO45_RS27230;Dbxref=GenBank:WP_223964721.1;Name=WP_223964721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483939.1;locus_tag=LDO45_RS27230;product=hypothetical protein;protein_id=WP_223964721.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 45986 46594 . - . ID=gene-LDO45_RS27235;Name=LDO45_RS27235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27235;old_locus_tag=BDI4_630052 NZ_CAJZAS010000220.1 Protein Homology CDS 45986 46594 . - 0 ID=cds-WP_059526508.1;Parent=gene-LDO45_RS27235;Dbxref=GenBank:WP_059526508.1;Name=WP_059526508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483943.1;locus_tag=LDO45_RS27235;product=acyl-homoserine-lactone synthase;protein_id=WP_059526508.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 46804 47247 . - . ID=gene-LDO45_RS27240;Name=LDO45_RS27240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27240;old_locus_tag=BDI4_630053 NZ_CAJZAS010000220.1 Protein Homology CDS 46804 47247 . - 0 ID=cds-WP_059526506.1;Parent=gene-LDO45_RS27240;Dbxref=GenBank:WP_059526506.1;Name=WP_059526506.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603338.1;locus_tag=LDO45_RS27240;product=DUF4902 domain-containing protein;protein_id=WP_059526506.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 47321 48040 . + . ID=gene-LDO45_RS27245;Name=LDO45_RS27245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27245;old_locus_tag=BDI4_630054 NZ_CAJZAS010000220.1 Protein Homology CDS 47321 48040 . + 0 ID=cds-WP_059526503.1;Parent=gene-LDO45_RS27245;Dbxref=GenBank:WP_059526503.1;Name=WP_059526503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006409826.1;locus_tag=LDO45_RS27245;product=autoinducer binding domain-containing protein;protein_id=WP_059526503.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 48087 48794 . - . ID=gene-LDO45_RS27250;Name=LDO45_RS27250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27250;old_locus_tag=BDI4_630055 NZ_CAJZAS010000220.1 Protein Homology CDS 48087 48794 . - 0 ID=cds-WP_059526501.1;Parent=gene-LDO45_RS27250;Dbxref=GenBank:WP_059526501.1;Name=WP_059526501.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009897347.1;locus_tag=LDO45_RS27250;product=MgtC/SapB family protein;protein_id=WP_059526501.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 49125 50672 . - . ID=gene-LDO45_RS27255;Name=LDO45_RS27255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27255;old_locus_tag=BDI4_630056 NZ_CAJZAS010000220.1 Protein Homology CDS 49125 50672 . - 0 ID=cds-WP_223964722.1;Parent=gene-LDO45_RS27255;Dbxref=GenBank:WP_223964722.1;Name=WP_223964722.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496920.1;locus_tag=LDO45_RS27255;product=TolC family protein;protein_id=WP_223964722.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 50659 52710 . - . ID=gene-LDO45_RS27260;Name=LDO45_RS27260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27260;old_locus_tag=BDI4_630057 NZ_CAJZAS010000220.1 Protein Homology CDS 50659 52710 . - 0 ID=cds-WP_223964723.1;Parent=gene-LDO45_RS27260;Dbxref=GenBank:WP_223964723.1;Name=WP_223964723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547411.1;locus_tag=LDO45_RS27260;product=FUSC family protein;protein_id=WP_223964723.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 52691 53740 . - . ID=gene-LDO45_RS27265;Name=mdtN;gbkey=Gene;gene=mdtN;gene_biotype=protein_coding;locus_tag=LDO45_RS27265;old_locus_tag=BDI4_630058 NZ_CAJZAS010000220.1 Protein Homology CDS 52691 53740 . - 0 ID=cds-WP_059526486.1;Parent=gene-LDO45_RS27265;Dbxref=GenBank:WP_059526486.1;Name=WP_059526486.1;gbkey=CDS;gene=mdtN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751291.1;locus_tag=LDO45_RS27265;product=multidrug transporter subunit MdtN;protein_id=WP_059526486.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 53737 54027 . - . ID=gene-LDO45_RS27270;Name=LDO45_RS27270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27270;old_locus_tag=BDI4_630059 NZ_CAJZAS010000220.1 Protein Homology CDS 53737 54027 . - 0 ID=cds-WP_059698283.1;Parent=gene-LDO45_RS27270;Dbxref=GenBank:WP_059698283.1;Name=WP_059698283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366330.1;locus_tag=LDO45_RS27270;product=hypothetical protein;protein_id=WP_059698283.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 54530 55678 . + . ID=gene-LDO45_RS27275;Name=LDO45_RS27275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27275;old_locus_tag=BDI4_630060 NZ_CAJZAS010000220.1 Protein Homology CDS 54530 55678 . + 0 ID=cds-WP_223964724.1;Parent=gene-LDO45_RS27275;Dbxref=GenBank:WP_223964724.1;Name=WP_223964724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898918.1;locus_tag=LDO45_RS27275;product=metallophosphoesterase;protein_id=WP_223964724.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 55685 56269 . - . ID=gene-LDO45_RS27280;Name=LDO45_RS27280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27280;old_locus_tag=BDI4_630061 NZ_CAJZAS010000220.1 Protein Homology CDS 55685 56269 . - 0 ID=cds-WP_223964725.1;Parent=gene-LDO45_RS27280;Dbxref=GenBank:WP_223964725.1;Name=WP_223964725.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007587125.1;locus_tag=LDO45_RS27280;product=malonic semialdehyde reductase;protein_id=WP_223964725.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 56522 57127 . + . ID=gene-LDO45_RS27285;Name=LDO45_RS27285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27285;old_locus_tag=BDI4_630063 NZ_CAJZAS010000220.1 Protein Homology CDS 56522 57127 . + 0 ID=cds-WP_223964726.1;Parent=gene-LDO45_RS27285;Dbxref=GenBank:WP_223964726.1;Name=WP_223964726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758057.1;locus_tag=LDO45_RS27285;product=alpha-ketoglutarate-dependent dioxygenase AlkB;protein_id=WP_223964726.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 57445 57651 . + . ID=gene-LDO45_RS27290;Name=LDO45_RS27290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27290;old_locus_tag=BDI4_630064 NZ_CAJZAS010000220.1 Protein Homology CDS 57445 57651 . + 0 ID=cds-WP_044843168.1;Parent=gene-LDO45_RS27290;Dbxref=GenBank:WP_044843168.1;Name=WP_044843168.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766132.1;locus_tag=LDO45_RS27290;product=hypothetical protein;protein_id=WP_044843168.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 58047 58991 . + . ID=gene-LDO45_RS27295;Name=LDO45_RS27295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27295;old_locus_tag=BDI4_630065 NZ_CAJZAS010000220.1 Protein Homology CDS 58047 58991 . + 0 ID=cds-WP_223964727.1;Parent=gene-LDO45_RS27295;Dbxref=GenBank:WP_223964727.1;Name=WP_223964727.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413793.1;locus_tag=LDO45_RS27295;product=IclR family transcriptional regulator;protein_id=WP_223964727.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 59104 60183 . - . ID=gene-LDO45_RS27300;Name=LDO45_RS27300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27300;old_locus_tag=BDI4_630066 NZ_CAJZAS010000220.1 Protein Homology CDS 59104 60183 . - 0 ID=cds-WP_223964728.1;Parent=gene-LDO45_RS27300;Dbxref=GenBank:WP_223964728.1;Name=WP_223964728.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329028.1;locus_tag=LDO45_RS27300;product=porin;protein_id=WP_223964728.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 60634 60951 . + . ID=gene-LDO45_RS27305;Name=LDO45_RS27305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27305;old_locus_tag=BDI4_630068 NZ_CAJZAS010000220.1 Protein Homology CDS 60634 60951 . + 0 ID=cds-WP_006758060.1;Parent=gene-LDO45_RS27305;Dbxref=GenBank:WP_006758060.1;Name=WP_006758060.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396774.1;locus_tag=LDO45_RS27305;product=non-heme iron oxygenase ferredoxin subunit;protein_id=WP_006758060.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 60953 61264 . + . ID=gene-LDO45_RS27310;Name=LDO45_RS27310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27310;old_locus_tag=BDI4_630069 NZ_CAJZAS010000220.1 Protein Homology CDS 60953 61264 . + 0 ID=cds-WP_059526461.1;Parent=gene-LDO45_RS27310;Dbxref=GenBank:WP_059526461.1;Name=WP_059526461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004184841.1;locus_tag=LDO45_RS27310;product=recombinase-like helix-turn-helix domain-containing protein;protein_id=WP_059526461.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 61317 62387 . + . ID=gene-LDO45_RS27315;Name=LDO45_RS27315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27315;old_locus_tag=BDI4_630070 NZ_CAJZAS010000220.1 Protein Homology CDS 61317 62387 . + 0 ID=cds-WP_059526458.1;Parent=gene-LDO45_RS27315;Dbxref=GenBank:WP_059526458.1;Name=WP_059526458.1;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547422.1;locus_tag=LDO45_RS27315;product=aromatic ring-hydroxylating dioxygenase subunit alpha;protein_id=WP_059526458.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 62380 63150 . + . ID=gene-LDO45_RS27320;Name=LDO45_RS27320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27320;old_locus_tag=BDI4_630071 NZ_CAJZAS010000220.1 Protein Homology CDS 62380 63150 . + 0 ID=cds-WP_223964729.1;Parent=gene-LDO45_RS27320;Dbxref=GenBank:WP_223964729.1;Name=WP_223964729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354713.1;locus_tag=LDO45_RS27320;product=SDR family oxidoreductase;protein_id=WP_223964729.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 63185 63712 . + . ID=gene-LDO45_RS27325;Name=LDO45_RS27325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27325;old_locus_tag=BDI4_630072 NZ_CAJZAS010000220.1 Protein Homology CDS 63185 63712 . + 0 ID=cds-WP_059526452.1;Parent=gene-LDO45_RS27325;Dbxref=GenBank:WP_059526452.1;Name=WP_059526452.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366322.1;locus_tag=LDO45_RS27325;product=cupin domain-containing protein;protein_id=WP_059526452.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 63731 64627 . + . ID=gene-LDO45_RS27330;Name=LDO45_RS27330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27330;old_locus_tag=BDI4_630073 NZ_CAJZAS010000220.1 Protein Homology CDS 63731 64627 . + 0 ID=cds-WP_223964730.1;Parent=gene-LDO45_RS27330;Dbxref=GenBank:WP_223964730.1;Name=WP_223964730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547425.1;locus_tag=LDO45_RS27330;product=alpha/beta fold hydrolase;protein_id=WP_223964730.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 64624 65481 . + . ID=gene-LDO45_RS27335;Name=LDO45_RS27335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27335;old_locus_tag=BDI4_630074 NZ_CAJZAS010000220.1 Protein Homology CDS 64624 65481 . + 0 ID=cds-WP_223964731.1;Parent=gene-LDO45_RS27335;Dbxref=GenBank:WP_223964731.1;Name=WP_223964731.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027422.1;locus_tag=LDO45_RS27335;product=IclR family transcriptional regulator;protein_id=WP_223964731.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 65478 66275 . + . ID=gene-LDO45_RS27340;Name=LDO45_RS27340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27340;old_locus_tag=BDI4_630075 NZ_CAJZAS010000220.1 Protein Homology CDS 65478 66275 . + 0 ID=cds-WP_059526445.1;Parent=gene-LDO45_RS27340;Dbxref=GenBank:WP_059526445.1;Name=WP_059526445.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602774.1;locus_tag=LDO45_RS27340;product=SDR family oxidoreductase;protein_id=WP_059526445.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 66268 67938 . + . ID=gene-LDO45_RS27345;Name=LDO45_RS27345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27345;old_locus_tag=BDI4_630076 NZ_CAJZAS010000220.1 Protein Homology CDS 66268 67938 . + 0 ID=cds-WP_059526441.1;Parent=gene-LDO45_RS27345;Dbxref=GenBank:WP_059526441.1;Name=WP_059526441.1;Ontology_term=GO:0030976;gbkey=CDS;go_function=thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487228.1;locus_tag=LDO45_RS27345;product=thiamine pyrophosphate-binding protein;protein_id=WP_059526441.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 67931 68758 . + . ID=gene-LDO45_RS27350;Name=LDO45_RS27350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27350;old_locus_tag=BDI4_630077 NZ_CAJZAS010000220.1 Protein Homology CDS 67931 68758 . + 0 ID=cds-WP_223964732.1;Parent=gene-LDO45_RS27350;Dbxref=GenBank:WP_223964732.1;Name=WP_223964732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403212.1;locus_tag=LDO45_RS27350;product=aspartate dehydrogenase;protein_id=WP_223964732.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 68848 70338 . + . ID=gene-LDO45_RS27355;Name=LDO45_RS27355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27355;old_locus_tag=BDI4_630078 NZ_CAJZAS010000220.1 Protein Homology CDS 68848 70338 . + 0 ID=cds-WP_059526435.1;Parent=gene-LDO45_RS27355;Dbxref=GenBank:WP_059526435.1;Name=WP_059526435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255256.1;locus_tag=LDO45_RS27355;product=aldehyde dehydrogenase;protein_id=WP_059526435.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 70357 71319 . + . ID=gene-LDO45_RS27360;Name=LDO45_RS27360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27360;old_locus_tag=BDI4_630079 NZ_CAJZAS010000220.1 Protein Homology CDS 70357 71319 . + 0 ID=cds-WP_059698302.1;Parent=gene-LDO45_RS27360;Dbxref=GenBank:WP_059698302.1;Name=WP_059698302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898935.1;locus_tag=LDO45_RS27360;product=VOC family protein;protein_id=WP_059698302.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 71316 72560 . + . ID=gene-LDO45_RS27365;Name=LDO45_RS27365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27365;old_locus_tag=BDI4_630080 NZ_CAJZAS010000220.1 Protein Homology CDS 71316 72560 . + 0 ID=cds-WP_223964733.1;Parent=gene-LDO45_RS27365;Dbxref=GenBank:WP_223964733.1;Name=WP_223964733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339777.1;locus_tag=LDO45_RS27365;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_223964733.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 72589 73989 . + . ID=gene-LDO45_RS27370;Name=LDO45_RS27370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27370;old_locus_tag=BDI4_630081 NZ_CAJZAS010000220.1 Protein Homology CDS 72589 73989 . + 0 ID=cds-WP_059698306.1;Parent=gene-LDO45_RS27370;Dbxref=GenBank:WP_059698306.1;Name=WP_059698306.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329043.1;locus_tag=LDO45_RS27370;product=MFS transporter;protein_id=WP_059698306.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq pseudogene 74031 74246 . + . ID=gene-LDO45_RS27375;Name=LDO45_RS27375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS27375;old_locus_tag=BDI4_630082;partial=true;pseudo=true;start_range=.,74031 NZ_CAJZAS010000220.1 Protein Homology CDS 74031 74246 . + 0 ID=cds-LDO45_RS27375;Parent=gene-LDO45_RS27375;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898941.1;locus_tag=LDO45_RS27375;partial=true;product=hypothetical protein;pseudo=true;start_range=.,74031;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 74367 74768 . + . ID=gene-LDO45_RS27380;Name=LDO45_RS27380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27380;old_locus_tag=BDI4_630083 NZ_CAJZAS010000220.1 Protein Homology CDS 74367 74768 . + 0 ID=cds-WP_059526423.1;Parent=gene-LDO45_RS27380;Dbxref=GenBank:WP_059526423.1;Name=WP_059526423.1;Ontology_term=GO:0003680;gbkey=CDS;go_function=minor groove of adenine-thymine-rich DNA binding|0003680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659083.1;locus_tag=LDO45_RS27380;product=PPC domain-containing DNA-binding protein;protein_id=WP_059526423.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 74805 76091 . - . ID=gene-LDO45_RS27385;Name=LDO45_RS27385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27385;old_locus_tag=BDI4_630084 NZ_CAJZAS010000220.1 Protein Homology CDS 74805 76091 . - 0 ID=cds-WP_223964735.1;Parent=gene-LDO45_RS27385;Dbxref=GenBank:WP_223964735.1;Name=WP_223964735.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413810.1;locus_tag=LDO45_RS27385;product=Nramp family divalent metal transporter;protein_id=WP_223964735.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 76323 76571 . - . ID=gene-LDO45_RS27390;Name=LDO45_RS27390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27390;old_locus_tag=BDI4_630085 NZ_CAJZAS010000220.1 Protein Homology CDS 76323 76571 . - 0 ID=cds-WP_059819327.1;Parent=gene-LDO45_RS27390;Dbxref=GenBank:WP_059819327.1;Name=WP_059819327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216816.1;locus_tag=LDO45_RS27390;product=hypothetical protein;protein_id=WP_059819327.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 77046 77480 . - . ID=gene-LDO45_RS27395;Name=LDO45_RS27395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27395;old_locus_tag=BDI4_630087 NZ_CAJZAS010000220.1 Protein Homology CDS 77046 77480 . - 0 ID=cds-WP_059526413.1;Parent=gene-LDO45_RS27395;Dbxref=GenBank:WP_059526413.1;Name=WP_059526413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758080.1;locus_tag=LDO45_RS27395;product=universal stress protein;protein_id=WP_059526413.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 77885 79369 . + . ID=gene-LDO45_RS27400;Name=LDO45_RS27400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27400;old_locus_tag=BDI4_630088 NZ_CAJZAS010000220.1 Protein Homology CDS 77885 79369 . + 0 ID=cds-WP_223964736.1;Parent=gene-LDO45_RS27400;Dbxref=GenBank:WP_223964736.1;Name=WP_223964736.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396798.1;locus_tag=LDO45_RS27400;product=amidase;protein_id=WP_223964736.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 79616 80311 . + . ID=gene-LDO45_RS27405;Name=LDO45_RS27405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27405;old_locus_tag=BDI4_630089 NZ_CAJZAS010000220.1 Protein Homology CDS 79616 80311 . + 0 ID=cds-WP_223964737.1;Parent=gene-LDO45_RS27405;Dbxref=GenBank:WP_223964737.1;Name=WP_223964737.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216821.1;locus_tag=LDO45_RS27405;product=hypothetical protein;protein_id=WP_223964737.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 80430 81263 . + . ID=gene-LDO45_RS27410;Name=LDO45_RS27410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27410;old_locus_tag=BDI4_630090 NZ_CAJZAS010000220.1 Protein Homology CDS 80430 81263 . + 0 ID=cds-WP_223964738.1;Parent=gene-LDO45_RS27410;Dbxref=GenBank:WP_223964738.1;Name=WP_223964738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882482.1;locus_tag=LDO45_RS27410;product=arylamine N-acetyltransferase;protein_id=WP_223964738.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq pseudogene 81372 81546 . + . ID=gene-LDO45_RS27415;Name=LDO45_RS27415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS27415;old_locus_tag=BDI4_630091;pseudo=true NZ_CAJZAS010000220.1 Protein Homology CDS 81372 81546 . + 0 ID=cds-LDO45_RS27415;Parent=gene-LDO45_RS27415;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396803.1;locus_tag=LDO45_RS27415;product=ribbon-helix-helix domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 81654 82514 . + . ID=gene-LDO45_RS27420;Name=LDO45_RS27420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27420;old_locus_tag=BDI4_630092 NZ_CAJZAS010000220.1 Protein Homology CDS 81654 82514 . + 0 ID=cds-WP_059691879.1;Parent=gene-LDO45_RS27420;Dbxref=GenBank:WP_059691879.1;Name=WP_059691879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478747.1;locus_tag=LDO45_RS27420;product=class I SAM-dependent methyltransferase;protein_id=WP_059691879.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 82540 87381 . - . ID=gene-LDO45_RS27425;Name=LDO45_RS27425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27425;old_locus_tag=BDI4_630093 NZ_CAJZAS010000220.1 Protein Homology CDS 82540 87381 . - 0 ID=cds-WP_223964740.1;Parent=gene-LDO45_RS27425;Dbxref=GenBank:WP_223964740.1;Name=WP_223964740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006487209.1;locus_tag=LDO45_RS27425;product=NAD-glutamate dehydrogenase;protein_id=WP_223964740.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 87536 87757 . - . ID=gene-LDO45_RS27430;Name=LDO45_RS27430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27430;old_locus_tag=BDI4_630094 NZ_CAJZAS010000220.1 Protein Homology CDS 87536 87757 . - 0 ID=cds-WP_223964741.1;Parent=gene-LDO45_RS27430;Dbxref=GenBank:WP_223964741.1;Name=WP_223964741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659071.1;locus_tag=LDO45_RS27430;product=hypothetical protein;protein_id=WP_223964741.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 87874 88062 . - . ID=gene-LDO45_RS27435;Name=LDO45_RS27435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27435;old_locus_tag=BDI4_630095 NZ_CAJZAS010000220.1 Protein Homology CDS 87874 88062 . - 0 ID=cds-WP_014898956.1;Parent=gene-LDO45_RS27435;Dbxref=GenBank:WP_014898956.1;Name=WP_014898956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354745.1;locus_tag=LDO45_RS27435;product=4-oxalocrotonate tautomerase;protein_id=WP_014898956.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 88122 88898 . - . ID=gene-LDO45_RS27440;Name=LDO45_RS27440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27440;old_locus_tag=BDI4_630096 NZ_CAJZAS010000220.1 Protein Homology CDS 88122 88898 . - 0 ID=cds-WP_223964742.1;Parent=gene-LDO45_RS27440;Dbxref=GenBank:WP_223964742.1;Name=WP_223964742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766106.1;locus_tag=LDO45_RS27440;product=class II aldolase/adducin family protein;protein_id=WP_223964742.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 88873 89766 . - . ID=gene-LDO45_RS27445;Name=LDO45_RS27445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27445;old_locus_tag=BDI4_630097 NZ_CAJZAS010000220.1 Protein Homology CDS 88873 89766 . - 0 ID=cds-WP_223964743.1;Parent=gene-LDO45_RS27445;Dbxref=GenBank:WP_223964743.1;Name=WP_223964743.1;Ontology_term=GO:0071918,GO:0015204,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=urea transmembrane transporter activity|0015204||IEA;go_process=urea transmembrane transport|0071918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403238.1;locus_tag=LDO45_RS27445;product=urea transporter;protein_id=WP_223964743.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 90042 90602 . + . ID=gene-LDO45_RS27450;Name=LDO45_RS27450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27450;old_locus_tag=BDI4_630098 NZ_CAJZAS010000220.1 Protein Homology CDS 90042 90602 . + 0 ID=cds-WP_059819315.1;Parent=gene-LDO45_RS27450;Dbxref=GenBank:WP_059819315.1;Name=WP_059819315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339787.1;locus_tag=LDO45_RS27450;product=putative glycolipid-binding domain-containing protein;protein_id=WP_059819315.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 90557 91468 . - . ID=gene-LDO45_RS27455;Name=LDO45_RS27455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27455;old_locus_tag=BDI4_630099 NZ_CAJZAS010000220.1 Protein Homology CDS 90557 91468 . - 0 ID=cds-WP_223964744.1;Parent=gene-LDO45_RS27455;Dbxref=GenBank:WP_223964744.1;Name=WP_223964744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403240.1;locus_tag=LDO45_RS27455;product=alpha/beta fold hydrolase;protein_id=WP_223964744.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 91473 92378 . - . ID=gene-LDO45_RS27460;Name=LDO45_RS27460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27460;old_locus_tag=BDI4_630100 NZ_CAJZAS010000220.1 Protein Homology CDS 91473 92378 . - 0 ID=cds-WP_223964745.1;Parent=gene-LDO45_RS27460;Dbxref=GenBank:WP_223964745.1;Name=WP_223964745.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329071.1;locus_tag=LDO45_RS27460;product=metal-dependent hydrolase;protein_id=WP_223964745.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 92375 93313 . - . ID=gene-LDO45_RS27465;Name=LDO45_RS27465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27465;old_locus_tag=BDI4_630101 NZ_CAJZAS010000220.1 Protein Homology CDS 92375 93313 . - 0 ID=cds-WP_175909455.1;Parent=gene-LDO45_RS27465;Dbxref=GenBank:WP_175909455.1;Name=WP_175909455.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216831.1;locus_tag=LDO45_RS27465;product=SDR family oxidoreductase;protein_id=WP_175909455.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 93335 94912 . - . ID=gene-LDO45_RS27470;Name=LDO45_RS27470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27470;old_locus_tag=BDI4_630102 NZ_CAJZAS010000220.1 Protein Homology CDS 93335 94912 . - 0 ID=cds-WP_223964746.1;Parent=gene-LDO45_RS27470;Dbxref=GenBank:WP_223964746.1;Name=WP_223964746.1;Ontology_term=GO:0050660,GO:0050661;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216832.1;locus_tag=LDO45_RS27470;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_223964746.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 95156 95830 . - . ID=gene-LDO45_RS27475;Name=LDO45_RS27475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27475;old_locus_tag=BDI4_630105 NZ_CAJZAS010000220.1 Protein Homology CDS 95156 95830 . - 0 ID=cds-WP_223964747.1;Parent=gene-LDO45_RS27475;Dbxref=GenBank:WP_223964747.1;Name=WP_223964747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366283.1;locus_tag=LDO45_RS27475;product=lysoplasmalogenase;protein_id=WP_223964747.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 95820 95942 . + . ID=gene-LDO45_RS34310;Name=LDO45_RS34310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34310 NZ_CAJZAS010000220.1 GeneMarkS-2+ CDS 95820 95942 . + 0 ID=cds-WP_290371039.1;Parent=gene-LDO45_RS34310;Dbxref=GenBank:WP_290371039.1;Name=WP_290371039.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34310;product=hypothetical protein;protein_id=WP_290371039.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 96261 97223 . + . ID=gene-LDO45_RS27480;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=LDO45_RS27480;old_locus_tag=BDI4_630106 NZ_CAJZAS010000220.1 Protein Homology CDS 96261 97223 . + 0 ID=cds-WP_059691893.1;Parent=gene-LDO45_RS27480;Dbxref=GenBank:WP_059691893.1;Name=WP_059691893.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525503.1;locus_tag=LDO45_RS27480;product=agmatinase;protein_id=WP_059691893.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 97387 97611 . - . ID=gene-LDO45_RS27485;Name=LDO45_RS27485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27485;old_locus_tag=BDI4_630107 NZ_CAJZAS010000220.1 Protein Homology CDS 97387 97611 . - 0 ID=cds-WP_059533995.1;Parent=gene-LDO45_RS27485;Dbxref=GenBank:WP_059533995.1;Name=WP_059533995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753082.1;locus_tag=LDO45_RS27485;product=hypothetical protein;protein_id=WP_059533995.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 97882 98085 . - . ID=gene-LDO45_RS27490;Name=LDO45_RS27490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27490;old_locus_tag=BDI4_630108 NZ_CAJZAS010000220.1 Protein Homology CDS 97882 98085 . - 0 ID=cds-WP_059691886.1;Parent=gene-LDO45_RS27490;Dbxref=GenBank:WP_059691886.1;Name=WP_059691886.1;Ontology_term=GO:0001072,GO:0003676,GO:0003723,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,nucleic acid binding|0003676||IEA,RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014252848.1;locus_tag=LDO45_RS27490;product=cold-shock protein;protein_id=WP_059691886.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 98437 99417 . - . ID=gene-LDO45_RS27495;Name=LDO45_RS27495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27495;old_locus_tag=BDI4_630110 NZ_CAJZAS010000220.1 Protein Homology CDS 98437 99417 . - 0 ID=cds-WP_223964748.1;Parent=gene-LDO45_RS27495;Dbxref=GenBank:WP_223964748.1;Name=WP_223964748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011853072.1;locus_tag=LDO45_RS27495;product=sulfonate ABC transporter substrate-binding protein;protein_id=WP_223964748.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 99541 100380 . - . ID=gene-LDO45_RS27500;Name=LDO45_RS27500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27500;old_locus_tag=BDI4_630111 NZ_CAJZAS010000220.1 Protein Homology CDS 99541 100380 . - 0 ID=cds-WP_059533989.1;Parent=gene-LDO45_RS27500;Dbxref=GenBank:WP_059533989.1;Name=WP_059533989.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659057.1;locus_tag=LDO45_RS27500;product=MerR family transcriptional regulator;protein_id=WP_059533989.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 100390 100950 . - . ID=gene-LDO45_RS27505;Name=LDO45_RS27505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27505;old_locus_tag=BDI4_630112 NZ_CAJZAS010000220.1 Protein Homology CDS 100390 100950 . - 0 ID=cds-WP_059533987.1;Parent=gene-LDO45_RS27505;Dbxref=GenBank:WP_059533987.1;Name=WP_059533987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396819.1;locus_tag=LDO45_RS27505;product=GNAT family N-acetyltransferase;protein_id=WP_059533987.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 101046 101966 . - . ID=gene-LDO45_RS27510;Name=LDO45_RS27510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27510;old_locus_tag=BDI4_630113 NZ_CAJZAS010000220.1 Protein Homology CDS 101046 101966 . - 0 ID=cds-WP_223964766.1;Parent=gene-LDO45_RS27510;Dbxref=GenBank:WP_223964766.1;Name=WP_223964766.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882468.1;locus_tag=LDO45_RS27510;product=LysR family transcriptional regulator;protein_id=WP_223964766.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 102092 103090 . + . ID=gene-LDO45_RS27515;Name=LDO45_RS27515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27515;old_locus_tag=BDI4_630114 NZ_CAJZAS010000220.1 Protein Homology CDS 102092 103090 . + 0 ID=cds-WP_223964749.1;Parent=gene-LDO45_RS27515;Dbxref=GenBank:WP_223964749.1;Name=WP_223964749.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753092.1;locus_tag=LDO45_RS27515;product=quinone oxidoreductase;protein_id=WP_223964749.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 103167 104681 . - . ID=gene-LDO45_RS27520;Name=LDO45_RS27520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27520;old_locus_tag=BDI4_630115 NZ_CAJZAS010000220.1 Protein Homology CDS 103167 104681 . - 0 ID=cds-WP_223964750.1;Parent=gene-LDO45_RS27520;Dbxref=GenBank:WP_223964750.1;Name=WP_223964750.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496957.1;locus_tag=LDO45_RS27520;product=MDR family MFS transporter;protein_id=WP_223964750.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 104910 106469 . + . ID=gene-LDO45_RS27525;Name=LDO45_RS27525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27525;old_locus_tag=BDI4_630116 NZ_CAJZAS010000220.1 Protein Homology CDS 104910 106469 . + 0 ID=cds-WP_223964751.1;Parent=gene-LDO45_RS27525;Dbxref=GenBank:WP_223964751.1;Name=WP_223964751.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011882465.1;locus_tag=LDO45_RS27525;product=methyl-accepting chemotaxis protein;protein_id=WP_223964751.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 106527 108194 . - . ID=gene-LDO45_RS27530;Name=LDO45_RS27530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27530;old_locus_tag=BDI4_630117 NZ_CAJZAS010000220.1 Protein Homology CDS 106527 108194 . - 0 ID=cds-WP_223964752.1;Parent=gene-LDO45_RS27530;Dbxref=GenBank:WP_223964752.1;Name=WP_223964752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216839.1;locus_tag=LDO45_RS27530;product=ATP-dependent helicase;protein_id=WP_223964752.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 108311 109165 . - . ID=gene-LDO45_RS27535;Name=LDO45_RS27535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27535;old_locus_tag=BDI4_630118 NZ_CAJZAS010000220.1 Protein Homology CDS 108311 109165 . - 0 ID=cds-WP_059464640.1;Parent=gene-LDO45_RS27535;Dbxref=GenBank:WP_059464640.1;Name=WP_059464640.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329083.1;locus_tag=LDO45_RS27535;product=helix-turn-helix domain-containing protein;protein_id=WP_059464640.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 109697 109906 . + . ID=gene-LDO45_RS27540;Name=LDO45_RS27540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27540;old_locus_tag=BDI4_630119 NZ_CAJZAS010000220.1 Protein Homology CDS 109697 109906 . + 0 ID=cds-WP_059464641.1;Parent=gene-LDO45_RS27540;Dbxref=GenBank:WP_059464641.1;Name=WP_059464641.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547465.1;locus_tag=LDO45_RS27540;product=hypothetical protein;protein_id=WP_059464641.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 110103 110750 . - . ID=gene-LDO45_RS27545;Name=LDO45_RS27545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27545;old_locus_tag=BDI4_630120 NZ_CAJZAS010000220.1 Protein Homology CDS 110103 110750 . - 0 ID=cds-WP_223964753.1;Parent=gene-LDO45_RS27545;Dbxref=GenBank:WP_223964753.1;Name=WP_223964753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485969.1;locus_tag=LDO45_RS27545;product=hypothetical protein;protein_id=WP_223964753.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 110990 112324 . + . ID=gene-LDO45_RS27550;Name=LDO45_RS27550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27550;old_locus_tag=BDI4_630121 NZ_CAJZAS010000220.1 Protein Homology CDS 110990 112324 . + 0 ID=cds-WP_223964754.1;Parent=gene-LDO45_RS27550;Dbxref=GenBank:WP_223964754.1;Name=WP_223964754.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009900352.1;locus_tag=LDO45_RS27550;product=FAD-binding oxidoreductase;protein_id=WP_223964754.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 112385 113479 . + . ID=gene-LDO45_RS27555;Name=LDO45_RS27555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27555;old_locus_tag=BDI4_630122 NZ_CAJZAS010000220.1 Protein Homology CDS 112385 113479 . + 0 ID=cds-WP_059533978.1;Parent=gene-LDO45_RS27555;Dbxref=GenBank:WP_059533978.1;Name=WP_059533978.1;Ontology_term=GO:0006813;gbkey=CDS;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493390.1;locus_tag=LDO45_RS27555;product=TrkA family potassium uptake protein;protein_id=WP_059533978.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 113622 115100 . + . ID=gene-LDO45_RS27560;Name=LDO45_RS27560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27560;old_locus_tag=BDI4_630123 NZ_CAJZAS010000220.1 Protein Homology CDS 113622 115100 . + 0 ID=cds-WP_223964755.1;Parent=gene-LDO45_RS27560;Dbxref=GenBank:WP_223964755.1;Name=WP_223964755.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659042.1;locus_tag=LDO45_RS27560;product=sensor domain-containing diguanylate cyclase;protein_id=WP_223964755.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 115246 115578 . + . ID=gene-LDO45_RS27565;Name=LDO45_RS27565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27565;old_locus_tag=BDI4_630124 NZ_CAJZAS010000220.1 Protein Homology CDS 115246 115578 . + 0 ID=cds-WP_059819300.1;Parent=gene-LDO45_RS27565;Dbxref=GenBank:WP_059819300.1;Name=WP_059819300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759807.1;locus_tag=LDO45_RS27565;product=cupin domain-containing protein;protein_id=WP_059819300.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 115597 116355 . - . ID=gene-LDO45_RS27570;Name=LDO45_RS27570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27570;old_locus_tag=BDI4_630125 NZ_CAJZAS010000220.1 Protein Homology CDS 115597 116355 . - 0 ID=cds-WP_223964756.1;Parent=gene-LDO45_RS27570;Dbxref=GenBank:WP_223964756.1;Name=WP_223964756.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216840.1;locus_tag=LDO45_RS27570;product=SDR family oxidoreductase;protein_id=WP_223964756.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 116471 117415 . - . ID=gene-LDO45_RS27575;Name=LDO45_RS27575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27575;old_locus_tag=BDI4_630126 NZ_CAJZAS010000220.1 Protein Homology CDS 116471 117415 . - 0 ID=cds-WP_059533971.1;Parent=gene-LDO45_RS27575;Dbxref=GenBank:WP_059533971.1;Name=WP_059533971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396827.1;locus_tag=LDO45_RS27575;product=LysR family transcriptional regulator;protein_id=WP_059533971.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 117599 118813 . + . ID=gene-LDO45_RS27580;Name=LDO45_RS27580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27580;old_locus_tag=BDI4_630127 NZ_CAJZAS010000220.1 Protein Homology CDS 117599 118813 . + 0 ID=cds-WP_223964757.1;Parent=gene-LDO45_RS27580;Dbxref=GenBank:WP_223964757.1;Name=WP_223964757.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354836.1;locus_tag=LDO45_RS27580;product=FAD-dependent monooxygenase;protein_id=WP_223964757.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 119209 120495 . + . ID=gene-LDO45_RS27585;Name=LDO45_RS27585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27585;old_locus_tag=BDI4_630128 NZ_CAJZAS010000220.1 Protein Homology CDS 119209 120495 . + 0 ID=cds-WP_223964758.1;Parent=gene-LDO45_RS27585;Dbxref=GenBank:WP_223964758.1;Name=WP_223964758.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489831.1;locus_tag=LDO45_RS27585;product=cytochrome c;protein_id=WP_223964758.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 120511 121044 . + . ID=gene-LDO45_RS27590;Name=LDO45_RS27590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27590;old_locus_tag=BDI4_630129 NZ_CAJZAS010000220.1 Protein Homology CDS 120511 121044 . + 0 ID=cds-WP_223964759.1;Parent=gene-LDO45_RS27590;Dbxref=GenBank:WP_223964759.1;Name=WP_223964759.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339840.1;locus_tag=LDO45_RS27590;product=sorbitol dehydrogenase family protein;protein_id=WP_223964759.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 121072 122673 . + . ID=gene-LDO45_RS27595;Name=LDO45_RS27595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27595;old_locus_tag=BDI4_630130 NZ_CAJZAS010000220.1 Protein Homology CDS 121072 122673 . + 0 ID=cds-WP_059698347.1;Parent=gene-LDO45_RS27595;Dbxref=GenBank:WP_059698347.1;Name=WP_059698347.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547511.1;locus_tag=LDO45_RS27595;product=GMC family oxidoreductase;protein_id=WP_059698347.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 122740 123678 . - . ID=gene-LDO45_RS27600;Name=LDO45_RS27600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27600;old_locus_tag=BDI4_630131 NZ_CAJZAS010000220.1 Protein Homology CDS 122740 123678 . - 0 ID=cds-WP_059690863.1;Parent=gene-LDO45_RS27600;Dbxref=GenBank:WP_059690863.1;Name=WP_059690863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198444.1;locus_tag=LDO45_RS27600;product=esterase family protein;protein_id=WP_059690863.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 123743 124843 . - . ID=gene-LDO45_RS27605;Name=LDO45_RS27605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27605;old_locus_tag=BDI4_630133 NZ_CAJZAS010000220.1 Protein Homology CDS 123743 124843 . - 0 ID=cds-WP_059534019.1;Parent=gene-LDO45_RS27605;Dbxref=GenBank:WP_059534019.1;Name=WP_059534019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366257.1;locus_tag=LDO45_RS27605;product=OpgC domain-containing protein;protein_id=WP_059534019.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 125225 126379 . + . ID=gene-LDO45_RS27610;Name=LDO45_RS27610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27610;old_locus_tag=BDI4_630134 NZ_CAJZAS010000220.1 Protein Homology CDS 125225 126379 . + 0 ID=cds-WP_059690862.1;Parent=gene-LDO45_RS27610;Dbxref=GenBank:WP_059690862.1;Name=WP_059690862.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009907726.1;locus_tag=LDO45_RS27610;product=porin;protein_id=WP_059690862.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 126429 127340 . - . ID=gene-LDO45_RS27615;Name=LDO45_RS27615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27615;old_locus_tag=BDI4_630135 NZ_CAJZAS010000220.1 Protein Homology CDS 126429 127340 . - 0 ID=cds-WP_223964760.1;Parent=gene-LDO45_RS27615;Dbxref=GenBank:WP_223964760.1;Name=WP_223964760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899011.1;locus_tag=LDO45_RS27615;product=LysR family transcriptional regulator;protein_id=WP_223964760.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 127482 128498 . + . ID=gene-LDO45_RS27620;Name=LDO45_RS27620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27620;old_locus_tag=BDI4_630136 NZ_CAJZAS010000220.1 Protein Homology CDS 127482 128498 . + 0 ID=cds-WP_059690860.1;Parent=gene-LDO45_RS27620;Dbxref=GenBank:WP_059690860.1;Name=WP_059690860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756283.1;locus_tag=LDO45_RS27620;product=aldo/keto reductase;protein_id=WP_059690860.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 128634 129374 . + . ID=gene-LDO45_RS27625;Name=LDO45_RS27625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27625;old_locus_tag=BDI4_630137 NZ_CAJZAS010000220.1 Protein Homology CDS 128634 129374 . + 0 ID=cds-WP_223964761.1;Parent=gene-LDO45_RS27625;Dbxref=GenBank:WP_223964761.1;Name=WP_223964761.1;Ontology_term=GO:0006810;gbkey=CDS;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496972.1;locus_tag=LDO45_RS27625;product=sulfite exporter TauE/SafE family protein;protein_id=WP_223964761.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 129477 131621 . - . ID=gene-LDO45_RS27630;Name=LDO45_RS27630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27630;old_locus_tag=BDI4_630138 NZ_CAJZAS010000220.1 Protein Homology CDS 129477 131621 . - 0 ID=cds-WP_223964762.1;Parent=gene-LDO45_RS27630;Dbxref=GenBank:WP_223964762.1;Name=WP_223964762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478823.1;locus_tag=LDO45_RS27630;product=hypothetical protein;protein_id=WP_223964762.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 132035 132421 . - . ID=gene-LDO45_RS27635;Name=LDO45_RS27635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27635;old_locus_tag=BDI4_630140 NZ_CAJZAS010000220.1 Protein Homology CDS 132035 132421 . - 0 ID=cds-WP_059533953.1;Parent=gene-LDO45_RS27635;Dbxref=GenBank:WP_059533953.1;Name=WP_059533953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659031.1;locus_tag=LDO45_RS27635;product=ester cyclase;protein_id=WP_059533953.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 132475 133371 . - . ID=gene-LDO45_RS27640;Name=LDO45_RS27640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27640;old_locus_tag=BDI4_630141 NZ_CAJZAS010000220.1 Protein Homology CDS 132475 133371 . - 0 ID=cds-WP_223964763.1;Parent=gene-LDO45_RS27640;Dbxref=GenBank:WP_223964763.1;Name=WP_223964763.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756286.1;locus_tag=LDO45_RS27640;product=LysR substrate-binding domain-containing protein;protein_id=WP_223964763.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq gene 133907 134746 . + . ID=gene-LDO45_RS27645;Name=LDO45_RS27645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27645;old_locus_tag=BDI4_630144 NZ_CAJZAS010000220.1 Protein Homology CDS 133907 134746 . + 0 ID=cds-WP_223964764.1;Parent=gene-LDO45_RS27645;Dbxref=GenBank:WP_223964764.1;Name=WP_223964764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339846.1;locus_tag=LDO45_RS27645;product=peptidoglycan DD-metalloendopeptidase family protein;protein_id=WP_223964764.1;transl_table=11 NZ_CAJZAS010000220.1 RefSeq pseudogene 134936 135635 . + . ID=gene-LDO45_RS27650;Name=LDO45_RS27650;end_range=135635,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS27650;old_locus_tag=BDI4_630145;partial=true;pseudo=true NZ_CAJZAS010000220.1 Protein Homology CDS 134936 135635 . + 0 ID=cds-LDO45_RS27650;Parent=gene-LDO45_RS27650;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B missing C-terminus;Ontology_term=GO:0030655,GO:0008800;end_range=135635,.;gbkey=CDS;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366249.1;locus_tag=LDO45_RS27650;partial=true;product=serine hydrolase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000221.1 1 17774 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000221.1 RefSeq region 1 17774 . + . ID=NZ_CAJZAS010000221.1:1..17774;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_64 NZ_CAJZAS010000221.1 RefSeq gene 84 893 . + . ID=gene-LDO45_RS27655;Name=sctT;gbkey=Gene;gene=sctT;gene_biotype=protein_coding;locus_tag=LDO45_RS27655;old_locus_tag=BDI4_640001 NZ_CAJZAS010000221.1 Protein Homology CDS 84 893 . + 0 ID=cds-WP_059526749.1;Parent=gene-LDO45_RS27655;Dbxref=GenBank:WP_059526749.1;Name=WP_059526749.1;Ontology_term=GO:0030254,GO:0016020;gbkey=CDS;gene=sctT;go_component=membrane|0016020||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754499.1;locus_tag=LDO45_RS27655;product=type III secretion system export apparatus subunit SctT;protein_id=WP_059526749.1;transl_table=11 NZ_CAJZAS010000221.1 RefSeq gene 918 1949 . + . ID=gene-LDO45_RS27660;Name=LDO45_RS27660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27660;old_locus_tag=BDI4_640002 NZ_CAJZAS010000221.1 Protein Homology CDS 918 1949 . + 0 ID=cds-WP_059692139.1;Parent=gene-LDO45_RS27660;Dbxref=GenBank:WP_059692139.1;Name=WP_059692139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339696.1;locus_tag=LDO45_RS27660;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;protein_id=WP_059692139.1;transl_table=11 NZ_CAJZAS010000221.1 RefSeq gene 2206 4173 . + . ID=gene-LDO45_RS27665;Name=asnB;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=LDO45_RS27665;old_locus_tag=BDI4_640003 NZ_CAJZAS010000221.1 Protein Homology CDS 2206 4173 . + 0 ID=cds-WP_223964767.1;Parent=gene-LDO45_RS27665;Dbxref=GenBank:WP_223964767.1;Name=WP_223964767.1;Ontology_term=GO:0006529,GO:0004066;gbkey=CDS;gene=asnB;go_function=asparagine synthase (glutamine-hydrolyzing) activity|0004066||IEA;go_process=asparagine biosynthetic process|0006529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898780.1;locus_tag=LDO45_RS27665;product=asparagine synthase (glutamine-hydrolyzing);protein_id=WP_223964767.1;transl_table=11 NZ_CAJZAS010000221.1 RefSeq gene 4189 17637 . - . ID=gene-LDO45_RS27670;Name=LDO45_RS27670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27670;old_locus_tag=BDI4_640004 NZ_CAJZAS010000221.1 Protein Homology CDS 4189 17637 . - 0 ID=cds-WP_223964768.1;Parent=gene-LDO45_RS27670;Dbxref=GenBank:WP_223964768.1;Name=WP_223964768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366485.1;locus_tag=LDO45_RS27670;product=LWXIA domain-containing protein;protein_id=WP_223964768.1;transl_table=11 ##sequence-region NZ_CAJZAS010000222.1 1 15365 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000222.1 RefSeq region 1 15365 . + . ID=NZ_CAJZAS010000222.1:1..15365;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_65 NZ_CAJZAS010000222.1 RefSeq gene 1 813 . + . ID=gene-LDO45_RS27675;Name=LDO45_RS27675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27675;partial=true;start_range=.,1 NZ_CAJZAS010000222.1 Protein Homology CDS 1 813 . + 0 ID=cds-WP_223964769.1;Parent=gene-LDO45_RS27675;Dbxref=GenBank:WP_223964769.1;Name=WP_223964769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407166.1;locus_tag=LDO45_RS27675;partial=true;product=flagellar hook-length control protein FliK;protein_id=WP_223964769.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000222.1 RefSeq gene 847 2490 . - . ID=gene-LDO45_RS27680;Name=LDO45_RS27680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27680;old_locus_tag=BDI4_650003 NZ_CAJZAS010000222.1 Protein Homology CDS 847 2490 . - 0 ID=cds-WP_223964770.1;Parent=gene-LDO45_RS27680;Dbxref=GenBank:WP_223964770.1;Name=WP_223964770.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329413.1;locus_tag=LDO45_RS27680;product=GMC family oxidoreductase;protein_id=WP_223964770.1;transl_table=11 NZ_CAJZAS010000222.1 RefSeq gene 3211 4653 . + . ID=gene-LDO45_RS27685;Name=LDO45_RS27685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27685;old_locus_tag=BDI4_650004 NZ_CAJZAS010000222.1 Protein Homology CDS 3211 4653 . + 0 ID=cds-WP_223964771.1;Parent=gene-LDO45_RS27685;Dbxref=GenBank:WP_223964771.1;Name=WP_223964771.1;Ontology_term=GO:0006081,GO:0050269;gbkey=CDS;go_function=coniferyl-aldehyde dehydrogenase activity|0050269||IEA;go_process=cellular aldehyde metabolic process|0006081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100937.1;locus_tag=LDO45_RS27685;product=coniferyl aldehyde dehydrogenase;protein_id=WP_223964771.1;transl_table=11 NZ_CAJZAS010000222.1 RefSeq gene 4726 5748 . - . ID=gene-LDO45_RS27690;Name=LDO45_RS27690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27690;old_locus_tag=BDI4_650005 NZ_CAJZAS010000222.1 Protein Homology CDS 4726 5748 . - 0 ID=cds-WP_374109555.1;Parent=gene-LDO45_RS27690;Dbxref=GenBank:WP_374109555.1;Name=WP_374109555.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019255177.1;locus_tag=LDO45_RS27690;product=serine/threonine protein kinase;protein_id=WP_374109555.1;transl_table=11 NZ_CAJZAS010000222.1 RefSeq gene 5807 6019 . - . ID=gene-LDO45_RS27695;Name=LDO45_RS27695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27695;old_locus_tag=BDI4_650006 NZ_CAJZAS010000222.1 Protein Homology CDS 5807 6019 . - 0 ID=cds-WP_011886311.1;Parent=gene-LDO45_RS27695;Dbxref=GenBank:WP_011886311.1;Name=WP_011886311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198969.1;locus_tag=LDO45_RS27695;product=hypothetical protein;protein_id=WP_011886311.1;transl_table=11 NZ_CAJZAS010000222.1 RefSeq gene 6647 7528 . + . ID=gene-LDO45_RS27700;Name=LDO45_RS27700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27700;old_locus_tag=BDI4_650008 NZ_CAJZAS010000222.1 Protein Homology CDS 6647 7528 . + 0 ID=cds-WP_223964773.1;Parent=gene-LDO45_RS27700;Dbxref=GenBank:WP_223964773.1;Name=WP_223964773.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214341.1;locus_tag=LDO45_RS27700;product=DMT family transporter;protein_id=WP_223964773.1;transl_table=11 NZ_CAJZAS010000222.1 RefSeq gene 7832 8017 . + . ID=gene-LDO45_RS27705;Name=LDO45_RS27705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27705;old_locus_tag=BDI4_650009 NZ_CAJZAS010000222.1 Protein Homology CDS 7832 8017 . + 0 ID=cds-WP_014895742.1;Parent=gene-LDO45_RS27705;Dbxref=GenBank:WP_014895742.1;Name=WP_014895742.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100910.1;locus_tag=LDO45_RS27705;product=hypothetical protein;protein_id=WP_014895742.1;transl_table=11 NZ_CAJZAS010000222.1 RefSeq gene 8137 9180 . - . ID=gene-LDO45_RS27710;Name=mgrA;gbkey=Gene;gene=mgrA;gene_biotype=protein_coding;locus_tag=LDO45_RS27710;old_locus_tag=BDI4_650010 NZ_CAJZAS010000222.1 Protein Homology CDS 8137 9180 . - 0 ID=cds-WP_223964774.1;Parent=gene-LDO45_RS27710;Dbxref=GenBank:WP_223964774.1;Name=WP_223964774.1;Ontology_term=GO:0047834;gbkey=CDS;gene=mgrA;go_function=D-threo-aldose 1-dehydrogenase activity|0047834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008923385.1;locus_tag=LDO45_RS27710;product=L-glyceraldehyde 3-phosphate reductase;protein_id=WP_223964774.1;transl_table=11 NZ_CAJZAS010000222.1 RefSeq gene 9365 9571 . + . ID=gene-LDO45_RS27715;Name=LDO45_RS27715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27715;old_locus_tag=BDI4_650011 NZ_CAJZAS010000222.1 Protein Homology CDS 9365 9571 . + 0 ID=cds-WP_059534988.1;Parent=gene-LDO45_RS27715;Dbxref=GenBank:WP_059534988.1;Name=WP_059534988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024143.1;locus_tag=LDO45_RS27715;product=DUF3185 family protein;protein_id=WP_059534988.1;transl_table=11 NZ_CAJZAS010000222.1 RefSeq gene 9726 10499 . - . ID=gene-LDO45_RS27720;Name=LDO45_RS27720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27720;old_locus_tag=BDI4_650012 NZ_CAJZAS010000222.1 Protein Homology CDS 9726 10499 . - 0 ID=cds-WP_175911130.1;Parent=gene-LDO45_RS27720;Dbxref=GenBank:WP_175911130.1;Name=WP_175911130.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364943.1;locus_tag=LDO45_RS27720;product=phytanoyl-CoA dioxygenase family protein;protein_id=WP_175911130.1;transl_table=11 NZ_CAJZAS010000222.1 RefSeq gene 10853 11194 . + . ID=gene-LDO45_RS27725;Name=LDO45_RS27725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27725;old_locus_tag=BDI4_650013 NZ_CAJZAS010000222.1 Protein Homology CDS 10853 11194 . + 0 ID=cds-WP_059534984.1;Parent=gene-LDO45_RS27725;Dbxref=GenBank:WP_059534984.1;Name=WP_059534984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886318.1;locus_tag=LDO45_RS27725;product=hypothetical protein;protein_id=WP_059534984.1;transl_table=11 NZ_CAJZAS010000222.1 RefSeq gene 11304 12491 . - . ID=gene-LDO45_RS27730;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=LDO45_RS27730;old_locus_tag=BDI4_650014 NZ_CAJZAS010000222.1 Protein Homology CDS 11304 12491 . - 0 ID=cds-WP_043184698.1;Parent=gene-LDO45_RS27730;Dbxref=GenBank:WP_043184698.1;Name=WP_043184698.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024140.1;locus_tag=LDO45_RS27730;product=methionine adenosyltransferase;protein_id=WP_043184698.1;transl_table=11 NZ_CAJZAS010000222.1 RefSeq gene 12757 13641 . + . ID=gene-LDO45_RS27735;Name=lpxL;gbkey=Gene;gene=lpxL;gene_biotype=protein_coding;locus_tag=LDO45_RS27735;old_locus_tag=BDI4_650015 NZ_CAJZAS010000222.1 Protein Homology CDS 12757 13641 . + 0 ID=cds-WP_059534982.1;Parent=gene-LDO45_RS27735;Dbxref=GenBank:WP_059534982.1;Name=WP_059534982.1;gbkey=CDS;gene=lpxL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482982.1;locus_tag=LDO45_RS27735;product=lauroyl acyltransferase LpxL;protein_id=WP_059534982.1;transl_table=11 NZ_CAJZAS010000222.1 RefSeq gene 13925 14794 . + . ID=gene-LDO45_RS27740;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=LDO45_RS27740;old_locus_tag=BDI4_650016 NZ_CAJZAS010000222.1 Protein Homology CDS 13925 14794 . + 0 ID=cds-WP_059534980.1;Parent=gene-LDO45_RS27740;Dbxref=GenBank:WP_059534980.1;Name=WP_059534980.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886321.1;locus_tag=LDO45_RS27740;product=diaminopimelate epimerase;protein_id=WP_059534980.1;transl_table=11 NZ_CAJZAS010000222.1 RefSeq gene 14831 15365 . + . ID=gene-LDO45_RS27745;Name=LDO45_RS27745;end_range=15365,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27745;partial=true NZ_CAJZAS010000222.1 Protein Homology CDS 14831 15365 . + 0 ID=cds-WP_223964775.1;Parent=gene-LDO45_RS27745;Dbxref=GenBank:WP_223964775.1;Name=WP_223964775.1;end_range=15365,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895733.1;locus_tag=LDO45_RS27745;partial=true;product=DUF484 family protein;protein_id=WP_223964775.1;transl_table=11 ##sequence-region NZ_CAJZAS010000223.1 1 65599 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000223.1 RefSeq region 1 65599 . + . ID=NZ_CAJZAS010000223.1:1..65599;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_66 NZ_CAJZAS010000223.1 RefSeq pseudogene 1 257 . + . ID=gene-LDO45_RS27750;Name=LDO45_RS27750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS27750;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000223.1 Protein Homology CDS 1 257 . + 2 ID=cds-LDO45_RS27750;Parent=gene-LDO45_RS27750;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013093838.1;locus_tag=LDO45_RS27750;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 705 1355 . + . ID=gene-LDO45_RS27755;Name=LDO45_RS27755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27755;old_locus_tag=BDI4_660003 NZ_CAJZAS010000223.1 Protein Homology CDS 705 1355 . + 0 ID=cds-WP_223964776.1;Parent=gene-LDO45_RS27755;Dbxref=GenBank:WP_223964776.1;Name=WP_223964776.1;Ontology_term=GO:0009432,GO:0018142,GO:0003697,GO:0008233;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA,peptidase activity|0008233||IEA;go_process=SOS response|0009432||IEA,obsolete protein-DNA covalent cross-linking|0018142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764383.1;locus_tag=LDO45_RS27755;product=SOS response-associated peptidase;protein_id=WP_223964776.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 1454 1621 . - . ID=gene-LDO45_RS27760;Name=LDO45_RS27760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27760;old_locus_tag=BDI4_660004 NZ_CAJZAS010000223.1 GeneMarkS-2+ CDS 1454 1621 . - 0 ID=cds-WP_223964777.1;Parent=gene-LDO45_RS27760;Dbxref=GenBank:WP_223964777.1;Name=WP_223964777.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS27760;product=hypothetical protein;protein_id=WP_223964777.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 1771 2262 . + . ID=gene-LDO45_RS27765;Name=LDO45_RS27765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27765;old_locus_tag=BDI4_660007 NZ_CAJZAS010000223.1 GeneMarkS-2+ CDS 1771 2262 . + 0 ID=cds-WP_223964778.1;Parent=gene-LDO45_RS27765;Dbxref=GenBank:WP_223964778.1;Name=WP_223964778.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS27765;product=hypothetical protein;protein_id=WP_223964778.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 2327 3256 . + . ID=gene-LDO45_RS27770;Name=LDO45_RS27770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27770;old_locus_tag=BDI4_660008 NZ_CAJZAS010000223.1 Protein Homology CDS 2327 3256 . + 0 ID=cds-WP_223964779.1;Parent=gene-LDO45_RS27770;Dbxref=GenBank:WP_223964779.1;Name=WP_223964779.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR00229.1;locus_tag=LDO45_RS27770;product=PAS domain S-box protein;protein_id=WP_223964779.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 3365 3778 . - . ID=gene-LDO45_RS27775;Name=LDO45_RS27775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27775;old_locus_tag=BDI4_660009 NZ_CAJZAS010000223.1 Protein Homology CDS 3365 3778 . - 0 ID=cds-WP_223964780.1;Parent=gene-LDO45_RS27775;Dbxref=GenBank:WP_223964780.1;Name=WP_223964780.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024252.5;locus_tag=LDO45_RS27775;product=helix-turn-helix transcriptional regulator;protein_id=WP_223964780.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 4161 6422 . + . ID=gene-LDO45_RS27780;Name=LDO45_RS27780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27780;old_locus_tag=BDI4_660011 NZ_CAJZAS010000223.1 Protein Homology CDS 4161 6422 . + 0 ID=cds-WP_223964781.1;Parent=gene-LDO45_RS27780;Dbxref=GenBank:WP_223964781.1;Name=WP_223964781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534591.1;locus_tag=LDO45_RS27780;product=YadA-like family protein;protein_id=WP_223964781.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 6479 7483 . + . ID=gene-LDO45_RS27785;Name=LDO45_RS27785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27785;old_locus_tag=BDI4_660012 NZ_CAJZAS010000223.1 Protein Homology CDS 6479 7483 . + 0 ID=cds-WP_223964782.1;Parent=gene-LDO45_RS27785;Dbxref=GenBank:WP_223964782.1;Name=WP_223964782.1;Ontology_term=GO:0015288,GO:0042834;gbkey=CDS;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: protein motif:HMM:NF012894.5;locus_tag=LDO45_RS27785;product=OmpA family protein;protein_id=WP_223964782.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 7480 8088 . + . ID=gene-LDO45_RS27790;Name=LDO45_RS27790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27790;old_locus_tag=BDI4_660013 NZ_CAJZAS010000223.1 Protein Homology CDS 7480 8088 . + 0 ID=cds-WP_374109556.1;Parent=gene-LDO45_RS27790;Dbxref=GenBank:WP_374109556.1;Name=WP_374109556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351878.1;locus_tag=LDO45_RS27790;product=phospholipase D family protein;protein_id=WP_374109556.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 8109 8426 . + . ID=gene-LDO45_RS27795;Name=LDO45_RS27795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27795;old_locus_tag=BDI4_660014 NZ_CAJZAS010000223.1 GeneMarkS-2+ CDS 8109 8426 . + 0 ID=cds-WP_223964783.1;Parent=gene-LDO45_RS27795;Dbxref=GenBank:WP_223964783.1;Name=WP_223964783.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS27795;product=hypothetical protein;protein_id=WP_223964783.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 8591 8860 . + . ID=gene-LDO45_RS27800;Name=LDO45_RS27800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27800;old_locus_tag=BDI4_660015 NZ_CAJZAS010000223.1 GeneMarkS-2+ CDS 8591 8860 . + 0 ID=cds-WP_223964784.1;Parent=gene-LDO45_RS27800;Dbxref=GenBank:WP_223964784.1;Name=WP_223964784.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS27800;product=hypothetical protein;protein_id=WP_223964784.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 9017 9712 . + . ID=gene-LDO45_RS27805;Name=LDO45_RS27805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27805;old_locus_tag=BDI4_660016 NZ_CAJZAS010000223.1 Protein Homology CDS 9017 9712 . + 0 ID=cds-WP_223964785.1;Parent=gene-LDO45_RS27805;Dbxref=GenBank:WP_223964785.1;Name=WP_223964785.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875711.1;locus_tag=LDO45_RS27805;product=DotI/IcmL family type IV secretion protein;protein_id=WP_223964785.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 9725 10876 . + . ID=gene-LDO45_RS27810;Name=LDO45_RS27810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27810;old_locus_tag=BDI4_660017 NZ_CAJZAS010000223.1 Protein Homology CDS 9725 10876 . + 0 ID=cds-WP_223964786.1;Parent=gene-LDO45_RS27810;Dbxref=GenBank:WP_223964786.1;Name=WP_223964786.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007183098.1;locus_tag=LDO45_RS27810;product=DotH/IcmK family type IV secretion protein;protein_id=WP_223964786.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 10891 12219 . + . ID=gene-LDO45_RS27815;Name=traO;gbkey=Gene;gene=traO;gene_biotype=protein_coding;locus_tag=LDO45_RS27815;old_locus_tag=BDI4_660018 NZ_CAJZAS010000223.1 Protein Homology CDS 10891 12219 . + 0 ID=cds-WP_223964787.1;Parent=gene-LDO45_RS27815;Dbxref=GenBank:WP_223964787.1;Name=WP_223964787.1;gbkey=CDS;gene=traO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008344316.1;locus_tag=LDO45_RS27815;product=conjugal transfer protein TraO;protein_id=WP_223964787.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 12235 13131 . + . ID=gene-LDO45_RS27820;Name=LDO45_RS27820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27820;old_locus_tag=BDI4_660019 NZ_CAJZAS010000223.1 GeneMarkS-2+ CDS 12235 13131 . + 0 ID=cds-WP_223964788.1;Parent=gene-LDO45_RS27820;Dbxref=GenBank:WP_223964788.1;Name=WP_223964788.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS27820;product=hypothetical protein;protein_id=WP_223964788.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 13143 13676 . + . ID=gene-LDO45_RS27825;Name=traQ;gbkey=Gene;gene=traQ;gene_biotype=protein_coding;locus_tag=LDO45_RS27825;old_locus_tag=BDI4_660020 NZ_CAJZAS010000223.1 Protein Homology CDS 13143 13676 . + 0 ID=cds-WP_223964789.1;Parent=gene-LDO45_RS27825;Dbxref=GenBank:WP_223964789.1;Name=WP_223964789.1;gbkey=CDS;gene=traQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007183101.1;locus_tag=LDO45_RS27825;product=conjugal transfer protein TraQ;protein_id=WP_223964789.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 13697 14161 . + . ID=gene-LDO45_RS27830;Name=LDO45_RS27830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27830;old_locus_tag=BDI4_660021 NZ_CAJZAS010000223.1 Protein Homology CDS 13697 14161 . + 0 ID=cds-WP_223964790.1;Parent=gene-LDO45_RS27830;Dbxref=GenBank:WP_223964790.1;Name=WP_223964790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007183102.1;locus_tag=LDO45_RS27830;product=DUF6750 family protein;protein_id=WP_223964790.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 14158 14895 . + . ID=gene-LDO45_RS27835;Name=LDO45_RS27835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27835;old_locus_tag=BDI4_660022 NZ_CAJZAS010000223.1 Protein Homology CDS 14158 14895 . + 0 ID=cds-WP_223964791.1;Parent=gene-LDO45_RS27835;Dbxref=GenBank:WP_223964791.1;Name=WP_223964791.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007183103.1;locus_tag=LDO45_RS27835;product=HNH endonuclease;protein_id=WP_223964791.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 14908 17973 . + . ID=gene-LDO45_RS27840;Name=LDO45_RS27840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27840;old_locus_tag=BDI4_660023 NZ_CAJZAS010000223.1 Protein Homology CDS 14908 17973 . + 0 ID=cds-WP_223964792.1;Parent=gene-LDO45_RS27840;Dbxref=GenBank:WP_223964792.1;Name=WP_223964792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007183104.1;locus_tag=LDO45_RS27840;product=conjugal transfer protein TraU;protein_id=WP_223964792.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 17970 19196 . + . ID=gene-LDO45_RS27845;Name=traW;gbkey=Gene;gene=traW;gene_biotype=protein_coding;locus_tag=LDO45_RS27845;old_locus_tag=BDI4_660024 NZ_CAJZAS010000223.1 Protein Homology CDS 17970 19196 . + 0 ID=cds-WP_223964793.1;Parent=gene-LDO45_RS27845;Dbxref=GenBank:WP_223964793.1;Name=WP_223964793.1;gbkey=CDS;gene=traW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875702.1;locus_tag=LDO45_RS27845;product=conjugal transfer protein TraW;protein_id=WP_223964793.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 19196 19765 . + . ID=gene-LDO45_RS27850;Name=LDO45_RS27850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27850;old_locus_tag=BDI4_660025 NZ_CAJZAS010000223.1 Protein Homology CDS 19196 19765 . + 0 ID=cds-WP_223964794.1;Parent=gene-LDO45_RS27850;Dbxref=GenBank:WP_223964794.1;Name=WP_223964794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008344331.1;locus_tag=LDO45_RS27850;product=hypothetical protein;protein_id=WP_223964794.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 19762 21981 . + . ID=gene-LDO45_RS27855;Name=LDO45_RS27855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27855;old_locus_tag=BDI4_660026 NZ_CAJZAS010000223.1 Protein Homology CDS 19762 21981 . + 0 ID=cds-WP_223964795.1;Parent=gene-LDO45_RS27855;Dbxref=GenBank:WP_223964795.1;Name=WP_223964795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007183107.1;locus_tag=LDO45_RS27855;product=DotA/TraY family protein;protein_id=WP_223964795.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 22049 22555 . + . ID=gene-LDO45_RS27860;Name=LDO45_RS27860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27860 NZ_CAJZAS010000223.1 GeneMarkS-2+ CDS 22049 22555 . + 0 ID=cds-WP_223964796.1;Parent=gene-LDO45_RS27860;Dbxref=GenBank:WP_223964796.1;Name=WP_223964796.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS27860;product=hypothetical protein;protein_id=WP_223964796.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 22706 23197 . + . ID=gene-LDO45_RS27865;Name=LDO45_RS27865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27865;old_locus_tag=BDI4_660027 NZ_CAJZAS010000223.1 GeneMarkS-2+ CDS 22706 23197 . + 0 ID=cds-WP_223964797.1;Parent=gene-LDO45_RS27865;Dbxref=GenBank:WP_223964797.1;Name=WP_223964797.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS27865;product=hypothetical protein;protein_id=WP_223964797.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 23274 28322 . - . ID=gene-LDO45_RS27870;Name=LDO45_RS27870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27870;old_locus_tag=BDI4_660028 NZ_CAJZAS010000223.1 Protein Homology CDS 23274 28322 . - 0 ID=cds-WP_223964798.1;Parent=gene-LDO45_RS27870;Dbxref=GenBank:WP_223964798.1;Name=WP_223964798.1;Ontology_term=GO:0006304,GO:0003677,GO:0003824;gbkey=CDS;go_function=DNA binding|0003677||IEA,catalytic activity|0003824||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF016724.5;locus_tag=LDO45_RS27870;product=Eco57I restriction-modification methylase domain-containing protein;protein_id=WP_223964798.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 28430 28741 . - . ID=gene-LDO45_RS27875;Name=LDO45_RS27875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27875 NZ_CAJZAS010000223.1 Protein Homology CDS 28430 28741 . - 0 ID=cds-WP_223964799.1;Parent=gene-LDO45_RS27875;Dbxref=GenBank:WP_223964799.1;Name=WP_223964799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008344165.1;locus_tag=LDO45_RS27875;product=hypothetical protein;protein_id=WP_223964799.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 28947 29879 . - . ID=gene-LDO45_RS27880;Name=LDO45_RS27880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27880;old_locus_tag=BDI4_660029 NZ_CAJZAS010000223.1 Protein Homology CDS 28947 29879 . - 0 ID=cds-WP_223964800.1;Parent=gene-LDO45_RS27880;Dbxref=GenBank:WP_223964800.1;Name=WP_223964800.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018154.5;locus_tag=LDO45_RS27880;product=zeta toxin family protein;protein_id=WP_223964800.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 29892 30146 . - . ID=gene-LDO45_RS27885;Name=LDO45_RS27885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27885;old_locus_tag=BDI4_660030 NZ_CAJZAS010000223.1 Protein Homology CDS 29892 30146 . - 0 ID=cds-WP_223964801.1;Parent=gene-LDO45_RS27885;Dbxref=GenBank:WP_223964801.1;Name=WP_223964801.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875783.1;locus_tag=LDO45_RS27885;product=hypothetical protein;protein_id=WP_223964801.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 30217 30609 . - . ID=gene-LDO45_RS27890;Name=LDO45_RS27890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27890;old_locus_tag=BDI4_660031 NZ_CAJZAS010000223.1 Protein Homology CDS 30217 30609 . - 0 ID=cds-WP_223964802.1;Parent=gene-LDO45_RS27890;Dbxref=GenBank:WP_223964802.1;Name=WP_223964802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008344177.1;locus_tag=LDO45_RS27890;product=hypothetical protein;protein_id=WP_223964802.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 30623 30994 . - . ID=gene-LDO45_RS27895;Name=LDO45_RS27895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27895;old_locus_tag=BDI4_660033 NZ_CAJZAS010000223.1 Protein Homology CDS 30623 30994 . - 0 ID=cds-WP_223964803.1;Parent=gene-LDO45_RS27895;Dbxref=GenBank:WP_223964803.1;Name=WP_223964803.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008344179.1;locus_tag=LDO45_RS27895;product=hypothetical protein;protein_id=WP_223964803.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 31004 33445 . - . ID=gene-LDO45_RS27900;Name=LDO45_RS27900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27900;old_locus_tag=BDI4_660034 NZ_CAJZAS010000223.1 Protein Homology CDS 31004 33445 . - 0 ID=cds-WP_223964804.1;Parent=gene-LDO45_RS27900;Dbxref=GenBank:WP_223964804.1;Name=WP_223964804.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008344184.1;locus_tag=LDO45_RS27900;product=DNA topoisomerase;protein_id=WP_223964804.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 33670 34044 . + . ID=gene-LDO45_RS27905;Name=LDO45_RS27905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27905;old_locus_tag=BDI4_660035 NZ_CAJZAS010000223.1 Protein Homology CDS 33670 34044 . + 0 ID=cds-WP_223964805.1;Parent=gene-LDO45_RS27905;Dbxref=GenBank:WP_223964805.1;Name=WP_223964805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875775.1;locus_tag=LDO45_RS27905;product=lytic transglycosylase domain-containing protein;protein_id=WP_223964805.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 34047 35198 . + . ID=gene-LDO45_RS27910;Name=LDO45_RS27910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27910;old_locus_tag=BDI4_660036 NZ_CAJZAS010000223.1 Protein Homology CDS 34047 35198 . + 0 ID=cds-WP_223964806.1;Parent=gene-LDO45_RS27910;Dbxref=GenBank:WP_223964806.1;Name=WP_223964806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008344192.1;locus_tag=LDO45_RS27910;product=conjugal transfer protein TrbA;protein_id=WP_223964806.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 35195 36112 . + . ID=gene-LDO45_RS27915;Name=LDO45_RS27915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27915;old_locus_tag=BDI4_660037 NZ_CAJZAS010000223.1 Protein Homology CDS 35195 36112 . + 0 ID=cds-WP_223964807.1;Parent=gene-LDO45_RS27915;Dbxref=GenBank:WP_223964807.1;Name=WP_223964807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875773.1;locus_tag=LDO45_RS27915;product=DsbC family protein;protein_id=WP_223964807.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 36117 37403 . + . ID=gene-LDO45_RS27920;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=LDO45_RS27920;old_locus_tag=BDI4_660038 NZ_CAJZAS010000223.1 Protein Homology CDS 36117 37403 . + 0 ID=cds-WP_223964808.1;Parent=gene-LDO45_RS27920;Dbxref=GenBank:WP_223964808.1;Name=WP_223964808.1;Ontology_term=GO:0006269,GO:0003896;gbkey=CDS;gene=dnaG;go_function=DNA primase activity|0003896||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008344196.1;locus_tag=LDO45_RS27920;product=DNA primase;protein_id=WP_223964808.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 37489 39705 . + . ID=gene-LDO45_RS27925;Name=LDO45_RS27925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27925;old_locus_tag=BDI4_660039 NZ_CAJZAS010000223.1 Protein Homology CDS 37489 39705 . + 0 ID=cds-WP_223964809.1;Parent=gene-LDO45_RS27925;Dbxref=GenBank:WP_223964809.1;Name=WP_223964809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875771.1;locus_tag=LDO45_RS27925;product=TraM recognition domain-containing protein;protein_id=WP_223964809.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 39717 41084 . + . ID=gene-LDO45_RS27930;Name=LDO45_RS27930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27930;old_locus_tag=BDI4_660040 NZ_CAJZAS010000223.1 Protein Homology CDS 39717 41084 . + 0 ID=cds-WP_223964810.1;Parent=gene-LDO45_RS27930;Dbxref=GenBank:WP_223964810.1;Name=WP_223964810.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008344199.1;locus_tag=LDO45_RS27930;product=helicase HerA domain-containing protein;protein_id=WP_223964810.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 41130 41822 . - . ID=gene-LDO45_RS27935;Name=LDO45_RS27935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27935;old_locus_tag=BDI4_660041 NZ_CAJZAS010000223.1 GeneMarkS-2+ CDS 41130 41822 . - 0 ID=cds-WP_223964811.1;Parent=gene-LDO45_RS27935;Dbxref=GenBank:WP_223964811.1;Name=WP_223964811.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS27935;product=hypothetical protein;protein_id=WP_223964811.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 41815 42336 . - . ID=gene-LDO45_RS27940;Name=LDO45_RS27940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27940;old_locus_tag=BDI4_660042 NZ_CAJZAS010000223.1 Protein Homology CDS 41815 42336 . - 0 ID=cds-WP_223964812.1;Parent=gene-LDO45_RS27940;Dbxref=GenBank:WP_223964812.1;Name=WP_223964812.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007183065.1;locus_tag=LDO45_RS27940;product=hypothetical protein;protein_id=WP_223964812.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 42524 44551 . + . ID=gene-LDO45_RS27945;Name=LDO45_RS27945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27945;old_locus_tag=BDI4_660043 NZ_CAJZAS010000223.1 Protein Homology CDS 42524 44551 . + 0 ID=cds-WP_223964813.1;Parent=gene-LDO45_RS27945;Dbxref=GenBank:WP_223964813.1;Name=WP_223964813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007183066.1;locus_tag=LDO45_RS27945;product=LPD7 domain-containing protein;protein_id=WP_223964813.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 44600 45067 . + . ID=gene-LDO45_RS27950;Name=LDO45_RS27950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27950;old_locus_tag=BDI4_660044 NZ_CAJZAS010000223.1 Protein Homology CDS 44600 45067 . + 0 ID=cds-WP_223964814.1;Parent=gene-LDO45_RS27950;Dbxref=GenBank:WP_223964814.1;Name=WP_223964814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008344214.1;locus_tag=LDO45_RS27950;product=hypothetical protein;protein_id=WP_223964814.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 45086 45547 . + . ID=gene-LDO45_RS27955;Name=LDO45_RS27955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27955;old_locus_tag=BDI4_660046 NZ_CAJZAS010000223.1 GeneMarkS-2+ CDS 45086 45547 . + 0 ID=cds-WP_223964815.1;Parent=gene-LDO45_RS27955;Dbxref=GenBank:WP_223964815.1;Name=WP_223964815.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS27955;product=hypothetical protein;protein_id=WP_223964815.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 45529 47079 . + . ID=gene-LDO45_RS27960;Name=LDO45_RS27960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27960;old_locus_tag=BDI4_660047 NZ_CAJZAS010000223.1 Protein Homology CDS 45529 47079 . + 0 ID=cds-WP_223964816.1;Parent=gene-LDO45_RS27960;Dbxref=GenBank:WP_223964816.1;Name=WP_223964816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004630401.1;locus_tag=LDO45_RS27960;product=hypothetical protein;protein_id=WP_223964816.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 47112 47363 . - . ID=gene-LDO45_RS27965;Name=LDO45_RS27965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27965 NZ_CAJZAS010000223.1 GeneMarkS-2+ CDS 47112 47363 . - 0 ID=cds-WP_223964817.1;Parent=gene-LDO45_RS27965;Dbxref=GenBank:WP_223964817.1;Name=WP_223964817.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS27965;product=hypothetical protein;protein_id=WP_223964817.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 48157 48897 . - . ID=gene-LDO45_RS27970;Name=LDO45_RS27970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27970;old_locus_tag=BDI4_660048 NZ_CAJZAS010000223.1 GeneMarkS-2+ CDS 48157 48897 . - 0 ID=cds-WP_223964818.1;Parent=gene-LDO45_RS27970;Dbxref=GenBank:WP_223964818.1;Name=WP_223964818.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS27970;product=hypothetical protein;protein_id=WP_223964818.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 49448 49717 . - . ID=gene-LDO45_RS27975;Name=icmT;gbkey=Gene;gene=icmT;gene_biotype=protein_coding;locus_tag=LDO45_RS27975;old_locus_tag=BDI4_660049 NZ_CAJZAS010000223.1 Protein Homology CDS 49448 49717 . - 0 ID=cds-WP_223964819.1;Parent=gene-LDO45_RS27975;Dbxref=GenBank:WP_223964819.1;Name=WP_223964819.1;gbkey=CDS;gene=icmT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008344218.1;locus_tag=LDO45_RS27975;product=IcmT/TraK family protein;protein_id=WP_223964819.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 49714 50880 . - . ID=gene-LDO45_RS27980;Name=traJ;gbkey=Gene;gene=traJ;gene_biotype=protein_coding;locus_tag=LDO45_RS27980;old_locus_tag=BDI4_660050 NZ_CAJZAS010000223.1 Protein Homology CDS 49714 50880 . - 0 ID=cds-WP_223964820.1;Parent=gene-LDO45_RS27980;Dbxref=GenBank:WP_223964820.1;Name=WP_223964820.1;gbkey=CDS;gene=traJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008344220.1;locus_tag=LDO45_RS27980;product=plasmid transfer ATPase TraJ;protein_id=WP_223964820.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 50877 51848 . - . ID=gene-LDO45_RS27985;Name=LDO45_RS27985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27985;old_locus_tag=BDI4_660051 NZ_CAJZAS010000223.1 Protein Homology CDS 50877 51848 . - 0 ID=cds-WP_223964821.1;Parent=gene-LDO45_RS27985;Dbxref=GenBank:WP_223964821.1;Name=WP_223964821.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875756.1;locus_tag=LDO45_RS27985;product=type IV secretory system conjugative DNA transfer family protein;protein_id=WP_223964821.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 51865 52419 . - . ID=gene-LDO45_RS27990;Name=LDO45_RS27990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS27990;old_locus_tag=BDI4_660052 NZ_CAJZAS010000223.1 Protein Homology CDS 51865 52419 . - 0 ID=cds-WP_223964822.1;Parent=gene-LDO45_RS27990;Dbxref=GenBank:WP_223964822.1;Name=WP_223964822.1;Note=Members of this family include DotD of type IVB secretion systems and TraH of plasmid conjugative plasmid systems%2C both lipoproteins.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007183072.1;locus_tag=LDO45_RS27990;product=DotD/TraH family lipoprotein;protein_id=WP_223964822.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq pseudogene 52489 54114 . - . ID=gene-LDO45_RS34440;Name=traI;end_range=54114,.;gbkey=Gene;gene=traI;gene_biotype=pseudogene;locus_tag=LDO45_RS34440;old_locus_tag=BDI4_660053;partial=true;pseudo=true NZ_CAJZAS010000223.1 Protein Homology CDS 52489 54114 . - 0 ID=cds-LDO45_RS34440;Parent=gene-LDO45_RS34440;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=54114,.;gbkey=CDS;gene=traI;inference=COORDINATES: protein motif:HMM:NF041893.1;locus_tag=LDO45_RS34440;partial=true;product=TraI/MobA(P) family conjugative relaxase;pseudo=true;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 54138 54374 . - . ID=gene-LDO45_RS28000;Name=LDO45_RS28000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28000 NZ_CAJZAS010000223.1 Protein Homology CDS 54138 54374 . - 0 ID=cds-WP_223964840.1;Parent=gene-LDO45_RS28000;Dbxref=GenBank:WP_223964840.1;Name=WP_223964840.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008344224.1;locus_tag=LDO45_RS28000;product=hypothetical protein;protein_id=WP_223964840.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 54375 54611 . - . ID=gene-LDO45_RS28005;Name=LDO45_RS28005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28005 NZ_CAJZAS010000223.1 Protein Homology CDS 54375 54611 . - 0 ID=cds-WP_223964823.1;Parent=gene-LDO45_RS28005;Dbxref=GenBank:WP_223964823.1;Name=WP_223964823.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008344226.1;locus_tag=LDO45_RS28005;product=hypothetical protein;protein_id=WP_223964823.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 54714 55016 . - . ID=gene-LDO45_RS28010;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=LDO45_RS28010;old_locus_tag=BDI4_660054 NZ_CAJZAS010000223.1 Protein Homology CDS 54714 55016 . - 0 ID=cds-WP_223964824.1;Parent=gene-LDO45_RS28010;Dbxref=GenBank:WP_223964824.1;Name=WP_223964824.1;Ontology_term=GO:0006355;gbkey=CDS;gene=mobA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009682506.1;locus_tag=LDO45_RS28010;product=plasmid mobilization protein MobA;protein_id=WP_223964824.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 55257 55691 . + . ID=gene-LDO45_RS28015;Name=LDO45_RS28015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28015;old_locus_tag=BDI4_660056 NZ_CAJZAS010000223.1 Protein Homology CDS 55257 55691 . + 0 ID=cds-WP_223964825.1;Parent=gene-LDO45_RS28015;Dbxref=GenBank:WP_223964825.1;Name=WP_223964825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875752.1;locus_tag=LDO45_RS28015;product=hypothetical protein;protein_id=WP_223964825.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 55705 56385 . + . ID=gene-LDO45_RS28020;Name=LDO45_RS28020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28020;old_locus_tag=BDI4_660057 NZ_CAJZAS010000223.1 Protein Homology CDS 55705 56385 . + 0 ID=cds-WP_223964826.1;Parent=gene-LDO45_RS28020;Dbxref=GenBank:WP_223964826.1;Name=WP_223964826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008919392.1;locus_tag=LDO45_RS28020;product=protein mobD;protein_id=WP_223964826.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 56378 57037 . + . ID=gene-LDO45_RS28025;Name=LDO45_RS28025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28025;old_locus_tag=BDI4_660058 NZ_CAJZAS010000223.1 Protein Homology CDS 56378 57037 . + 0 ID=cds-WP_223964827.1;Parent=gene-LDO45_RS28025;Dbxref=GenBank:WP_223964827.1;Name=WP_223964827.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011875750.1;locus_tag=LDO45_RS28025;product=hypothetical protein;protein_id=WP_223964827.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 57173 57973 . + . ID=gene-LDO45_RS28030;Name=LDO45_RS28030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28030;old_locus_tag=BDI4_660060 NZ_CAJZAS010000223.1 Protein Homology CDS 57173 57973 . + 0 ID=cds-WP_223964828.1;Parent=gene-LDO45_RS28030;Dbxref=GenBank:WP_223964828.1;Name=WP_223964828.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013704.5;locus_tag=LDO45_RS28030;product=site-specific DNA-methyltransferase;protein_id=WP_223964828.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 57982 58548 . + . ID=gene-LDO45_RS28035;Name=LDO45_RS28035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28035;old_locus_tag=BDI4_660061 NZ_CAJZAS010000223.1 Protein Homology CDS 57982 58548 . + 0 ID=cds-WP_223964829.1;Parent=gene-LDO45_RS28035;Dbxref=GenBank:WP_223964829.1;Name=WP_223964829.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024784.5;locus_tag=LDO45_RS28035;product=HNH endonuclease;protein_id=WP_223964829.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 58541 60382 . + . ID=gene-LDO45_RS28040;Name=LDO45_RS28040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28040;old_locus_tag=BDI4_660062 NZ_CAJZAS010000223.1 GeneMarkS-2+ CDS 58541 60382 . + 0 ID=cds-WP_223964830.1;Parent=gene-LDO45_RS28040;Dbxref=GenBank:WP_223964830.1;Name=WP_223964830.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS28040;product=hypothetical protein;protein_id=WP_223964830.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 60417 60893 . + . ID=gene-LDO45_RS28045;Name=LDO45_RS28045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28045;old_locus_tag=BDI4_660064 NZ_CAJZAS010000223.1 GeneMarkS-2+ CDS 60417 60893 . + 0 ID=cds-WP_223964831.1;Parent=gene-LDO45_RS28045;Dbxref=GenBank:WP_223964831.1;Name=WP_223964831.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS28045;product=hypothetical protein;protein_id=WP_223964831.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 60925 62157 . + . ID=gene-LDO45_RS28050;Name=LDO45_RS28050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28050;old_locus_tag=BDI4_660065 NZ_CAJZAS010000223.1 GeneMarkS-2+ CDS 60925 62157 . + 0 ID=cds-WP_223964832.1;Parent=gene-LDO45_RS28050;Dbxref=GenBank:WP_223964832.1;Name=WP_223964832.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS28050;product=hypothetical protein;protein_id=WP_223964832.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 62326 62622 . + . ID=gene-LDO45_RS28055;Name=LDO45_RS28055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28055;old_locus_tag=BDI4_660066 NZ_CAJZAS010000223.1 Protein Homology CDS 62326 62622 . + 0 ID=cds-WP_223964833.1;Parent=gene-LDO45_RS28055;Dbxref=GenBank:WP_223964833.1;Name=WP_223964833.1;Ontology_term=GO:0006355,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752201.1;locus_tag=LDO45_RS28055;product=H-NS family nucleoid-associated regulatory protein;protein_id=WP_223964833.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 63478 63822 . - . ID=gene-LDO45_RS28060;Name=LDO45_RS28060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28060;old_locus_tag=BDI4_660070 NZ_CAJZAS010000223.1 GeneMarkS-2+ CDS 63478 63822 . - 0 ID=cds-WP_223964834.1;Parent=gene-LDO45_RS28060;Dbxref=GenBank:WP_223964834.1;Name=WP_223964834.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS28060;product=hypothetical protein;protein_id=WP_223964834.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 63911 64258 . - . ID=gene-LDO45_RS28065;Name=LDO45_RS28065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28065 NZ_CAJZAS010000223.1 GeneMarkS-2+ CDS 63911 64258 . - 0 ID=cds-WP_223964835.1;Parent=gene-LDO45_RS28065;Dbxref=GenBank:WP_223964835.1;Name=WP_223964835.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS28065;product=hypothetical protein;protein_id=WP_223964835.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 64879 65112 . - . ID=gene-LDO45_RS28070;Name=LDO45_RS28070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28070;old_locus_tag=BDI4_660075 NZ_CAJZAS010000223.1 GeneMarkS-2+ CDS 64879 65112 . - 0 ID=cds-WP_223964836.1;Parent=gene-LDO45_RS28070;Dbxref=GenBank:WP_223964836.1;Name=WP_223964836.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS28070;product=hypothetical protein;protein_id=WP_223964836.1;transl_table=11 NZ_CAJZAS010000223.1 RefSeq gene 65132 65458 . - . ID=gene-LDO45_RS28075;Name=LDO45_RS28075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28075;old_locus_tag=BDI4_660076 NZ_CAJZAS010000223.1 GeneMarkS-2+ CDS 65132 65458 . - 0 ID=cds-WP_223964837.1;Parent=gene-LDO45_RS28075;Dbxref=GenBank:WP_223964837.1;Name=WP_223964837.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS28075;product=hypothetical protein;protein_id=WP_223964837.1;transl_table=11 ##sequence-region NZ_CAJZAS010000224.1 1 90827 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000224.1 RefSeq region 1 90827 . + . ID=NZ_CAJZAS010000224.1:1..90827;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_67 NZ_CAJZAS010000224.1 RefSeq gene 1 115 . + . ID=gene-LDO45_RS28080;Name=LDO45_RS28080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28080;partial=true;start_range=.,1 NZ_CAJZAS010000224.1 Protein Homology CDS 1 115 . + 1 ID=cds-WP_223964887.1;Parent=gene-LDO45_RS28080;Dbxref=GenBank:WP_223964887.1;Name=WP_223964887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493499.1;locus_tag=LDO45_RS28080;partial=true;product=NfeD family protein;protein_id=WP_223964887.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 112 885 . + . ID=gene-LDO45_RS28085;Name=LDO45_RS28085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28085;old_locus_tag=BDI4_670001 NZ_CAJZAS010000224.1 Protein Homology CDS 112 885 . + 0 ID=cds-WP_059527023.1;Parent=gene-LDO45_RS28085;Dbxref=GenBank:WP_059527023.1;Name=WP_059527023.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483242.1;locus_tag=LDO45_RS28085;product=slipin family protein;protein_id=WP_059527023.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 996 1226 . - . ID=gene-LDO45_RS28090;Name=LDO45_RS28090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28090;old_locus_tag=BDI4_670002 NZ_CAJZAS010000224.1 Protein Homology CDS 996 1226 . - 0 ID=cds-WP_223964841.1;Parent=gene-LDO45_RS28090;Dbxref=GenBank:WP_223964841.1;Name=WP_223964841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008921299.1;locus_tag=LDO45_RS28090;product=hypothetical protein;protein_id=WP_223964841.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 1235 2026 . - . ID=gene-LDO45_RS28095;Name=LDO45_RS28095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28095;old_locus_tag=BDI4_670003 NZ_CAJZAS010000224.1 GeneMarkS-2+ CDS 1235 2026 . - 0 ID=cds-WP_223964842.1;Parent=gene-LDO45_RS28095;Dbxref=GenBank:WP_223964842.1;Name=WP_223964842.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS28095;product=hypothetical protein;protein_id=WP_223964842.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 2382 3659 . - . ID=gene-LDO45_RS28100;Name=LDO45_RS28100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28100;old_locus_tag=BDI4_670004 NZ_CAJZAS010000224.1 Protein Homology CDS 2382 3659 . - 0 ID=cds-WP_059527026.1;Parent=gene-LDO45_RS28100;Dbxref=GenBank:WP_059527026.1;Name=WP_059527026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659370.1;locus_tag=LDO45_RS28100;product=haloacid dehalogenase-like hydrolase;protein_id=WP_059527026.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 4093 4989 . + . ID=gene-LDO45_RS28105;Name=LDO45_RS28105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28105;old_locus_tag=BDI4_670006 NZ_CAJZAS010000224.1 Protein Homology CDS 4093 4989 . + 0 ID=cds-WP_223964843.1;Parent=gene-LDO45_RS28105;Dbxref=GenBank:WP_223964843.1;Name=WP_223964843.1;Ontology_term=GO:0006508,GO:0004177,GO:0016787,GO:0046872;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413883.1;locus_tag=LDO45_RS28105;product=M24 family metallopeptidase;protein_id=WP_223964843.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 5034 6821 . + . ID=gene-LDO45_RS28110;Name=LDO45_RS28110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28110;old_locus_tag=BDI4_670005 NZ_CAJZAS010000224.1 Protein Homology CDS 5034 6821 . + 0 ID=cds-WP_223964844.1;Parent=gene-LDO45_RS28110;Dbxref=GenBank:WP_223964844.1;Name=WP_223964844.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480756.1;locus_tag=LDO45_RS28110;product=SDR family oxidoreductase;protein_id=WP_223964844.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 6856 7761 . + . ID=gene-LDO45_RS28115;Name=LDO45_RS28115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28115;old_locus_tag=BDI4_670007 NZ_CAJZAS010000224.1 Protein Homology CDS 6856 7761 . + 0 ID=cds-WP_223964845.1;Parent=gene-LDO45_RS28115;Dbxref=GenBank:WP_223964845.1;Name=WP_223964845.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659373.1;locus_tag=LDO45_RS28115;product=metal-dependent hydrolase;protein_id=WP_223964845.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 7853 8140 . + . ID=gene-LDO45_RS28120;Name=LDO45_RS28120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28120;old_locus_tag=BDI4_670009 NZ_CAJZAS010000224.1 Protein Homology CDS 7853 8140 . + 0 ID=cds-WP_059692078.1;Parent=gene-LDO45_RS28120;Dbxref=GenBank:WP_059692078.1;Name=WP_059692078.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396466.1;locus_tag=LDO45_RS28120;product=hypothetical protein;protein_id=WP_059692078.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 8392 8766 . + . ID=gene-LDO45_RS28125;Name=LDO45_RS28125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28125;old_locus_tag=BDI4_670011 NZ_CAJZAS010000224.1 Protein Homology CDS 8392 8766 . + 0 ID=cds-WP_059527245.1;Parent=gene-LDO45_RS28125;Dbxref=GenBank:WP_059527245.1;Name=WP_059527245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898625.1;locus_tag=LDO45_RS28125;product=DUF2917 domain-containing protein;protein_id=WP_059527245.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 8939 9217 . - . ID=gene-LDO45_RS28130;Name=LDO45_RS28130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28130;old_locus_tag=BDI4_670012 NZ_CAJZAS010000224.1 Protein Homology CDS 8939 9217 . - 0 ID=cds-WP_006480752.1;Parent=gene-LDO45_RS28130;Dbxref=GenBank:WP_006480752.1;Name=WP_006480752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880698.1;locus_tag=LDO45_RS28130;product=hypothetical protein;protein_id=WP_006480752.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 9983 11284 . + . ID=gene-LDO45_RS28135;Name=LDO45_RS28135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28135;old_locus_tag=BDI4_670014 NZ_CAJZAS010000224.1 Protein Homology CDS 9983 11284 . + 0 ID=cds-WP_059527038.1;Parent=gene-LDO45_RS28135;Dbxref=GenBank:WP_059527038.1;Name=WP_059527038.1;Ontology_term=GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009897941.1;locus_tag=LDO45_RS28135;product=NCS2 family permease;protein_id=WP_059527038.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 11394 12245 . - . ID=gene-LDO45_RS28140;Name=LDO45_RS28140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28140;old_locus_tag=BDI4_670015 NZ_CAJZAS010000224.1 Protein Homology CDS 11394 12245 . - 0 ID=cds-WP_223964888.1;Parent=gene-LDO45_RS28140;Dbxref=GenBank:WP_223964888.1;Name=WP_223964888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366643.1;locus_tag=LDO45_RS28140;product=LysR substrate-binding domain-containing protein;protein_id=WP_223964888.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 12448 12978 . + . ID=gene-LDO45_RS28145;Name=LDO45_RS28145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28145;old_locus_tag=BDI4_670016 NZ_CAJZAS010000224.1 Protein Homology CDS 12448 12978 . + 0 ID=cds-WP_223964846.1;Parent=gene-LDO45_RS28145;Dbxref=GenBank:WP_223964846.1;Name=WP_223964846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880701.1;locus_tag=LDO45_RS28145;product=sugar ABC transporter;protein_id=WP_223964846.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 12992 13318 . + . ID=gene-LDO45_RS28150;Name=LDO45_RS28150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28150;old_locus_tag=BDI4_670017 NZ_CAJZAS010000224.1 Protein Homology CDS 12992 13318 . + 0 ID=cds-WP_223964847.1;Parent=gene-LDO45_RS28150;Dbxref=GenBank:WP_223964847.1;Name=WP_223964847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659379.1;locus_tag=LDO45_RS28150;product=hypothetical protein;protein_id=WP_223964847.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 13322 14188 . + . ID=gene-LDO45_RS28155;Name=LDO45_RS28155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28155;old_locus_tag=BDI4_670018 NZ_CAJZAS010000224.1 Protein Homology CDS 13322 14188 . + 0 ID=cds-WP_223964848.1;Parent=gene-LDO45_RS28155;Dbxref=GenBank:WP_223964848.1;Name=WP_223964848.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659380.1;locus_tag=LDO45_RS28155;product=MBL fold metallo-hydrolase;protein_id=WP_223964848.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 14351 14638 . - . ID=gene-LDO45_RS28160;Name=LDO45_RS28160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28160;old_locus_tag=BDI4_670020 NZ_CAJZAS010000224.1 Protein Homology CDS 14351 14638 . - 0 ID=cds-WP_014898618.1;Parent=gene-LDO45_RS28160;Dbxref=GenBank:WP_014898618.1;Name=WP_014898618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006027738.1;locus_tag=LDO45_RS28160;product=DUF1488 domain-containing protein;protein_id=WP_014898618.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 14882 15073 . - . ID=gene-LDO45_RS28165;Name=LDO45_RS28165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28165;old_locus_tag=BDI4_670021 NZ_CAJZAS010000224.1 Protein Homology CDS 14882 15073 . - 0 ID=cds-WP_059527249.1;Parent=gene-LDO45_RS28165;Dbxref=GenBank:WP_059527249.1;Name=WP_059527249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880705.1;locus_tag=LDO45_RS28165;product=DUF2964 family protein;protein_id=WP_059527249.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 15453 17342 . + . ID=gene-LDO45_RS28170;Name=LDO45_RS28170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28170;old_locus_tag=BDI4_670022 NZ_CAJZAS010000224.1 Protein Homology CDS 15453 17342 . + 0 ID=cds-WP_223964849.1;Parent=gene-LDO45_RS28170;Dbxref=GenBank:WP_223964849.1;Name=WP_223964849.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0043565;gbkey=CDS;go_function=ATP binding|0005524||IEA,sequence-specific DNA binding|0043565||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749465.1;locus_tag=LDO45_RS28170;product=sigma-54-dependent Fis family transcriptional regulator;protein_id=WP_223964849.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 17442 17744 . + . ID=gene-LDO45_RS28175;Name=LDO45_RS28175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28175;old_locus_tag=BDI4_670024 NZ_CAJZAS010000224.1 Protein Homology CDS 17442 17744 . + 0 ID=cds-WP_059527056.1;Parent=gene-LDO45_RS28175;Dbxref=GenBank:WP_059527056.1;Name=WP_059527056.1;Ontology_term=GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486753.1;locus_tag=LDO45_RS28175;product=2Fe-2S iron-sulfur cluster-binding protein;protein_id=WP_059527056.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 17801 18295 . + . ID=gene-LDO45_RS28180;Name=LDO45_RS28180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28180;old_locus_tag=BDI4_670023 NZ_CAJZAS010000224.1 Protein Homology CDS 17801 18295 . + 0 ID=cds-WP_059527059.1;Parent=gene-LDO45_RS28180;Dbxref=GenBank:WP_059527059.1;Name=WP_059527059.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659385.1;locus_tag=LDO45_RS28180;product=SRPBCC family protein;protein_id=WP_059527059.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 18400 18777 . + . ID=gene-LDO45_RS28185;Name=LDO45_RS28185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28185;old_locus_tag=BDI4_670025 NZ_CAJZAS010000224.1 Protein Homology CDS 18400 18777 . + 0 ID=cds-WP_223964850.1;Parent=gene-LDO45_RS28185;Dbxref=GenBank:WP_223964850.1;Name=WP_223964850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339613.1;locus_tag=LDO45_RS28185;product=DUF2946 domain-containing protein;protein_id=WP_223964850.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 18870 19007 . + . ID=gene-LDO45_RS28190;Name=LDO45_RS28190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28190 NZ_CAJZAS010000224.1 GeneMarkS-2+ CDS 18870 19007 . + 0 ID=cds-WP_223964851.1;Parent=gene-LDO45_RS28190;Dbxref=GenBank:WP_223964851.1;Name=WP_223964851.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS28190;product=hypothetical protein;protein_id=WP_223964851.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 19004 19369 . + . ID=gene-LDO45_RS28195;Name=copC;gbkey=Gene;gene=copC;gene_biotype=protein_coding;locus_tag=LDO45_RS28195;old_locus_tag=BDI4_670026 NZ_CAJZAS010000224.1 Protein Homology CDS 19004 19369 . + 0 ID=cds-WP_059699197.1;Parent=gene-LDO45_RS28195;Dbxref=GenBank:WP_059699197.1;Name=WP_059699197.1;Ontology_term=GO:0006825,GO:0005507,GO:0042597;gbkey=CDS;gene=copC;go_component=periplasmic space|0042597||IEA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354302.1;locus_tag=LDO45_RS28195;product=copper homeostasis periplasmic binding protein CopC;protein_id=WP_059699197.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 19422 19868 . + . ID=gene-LDO45_RS28200;Name=LDO45_RS28200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28200;old_locus_tag=BDI4_670027 NZ_CAJZAS010000224.1 Protein Homology CDS 19422 19868 . + 0 ID=cds-WP_223964852.1;Parent=gene-LDO45_RS28200;Dbxref=GenBank:WP_223964852.1;Name=WP_223964852.1;Ontology_term=GO:0016531;gbkey=CDS;go_function=copper chaperone activity|0016531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366652.1;locus_tag=LDO45_RS28200;product=copper chaperone PCu(A)C;protein_id=WP_223964852.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 19901 20077 . + . ID=gene-LDO45_RS28205;Name=LDO45_RS28205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28205;old_locus_tag=BDI4_670028 NZ_CAJZAS010000224.1 Protein Homology CDS 19901 20077 . + 0 ID=cds-WP_223964853.1;Parent=gene-LDO45_RS28205;Dbxref=GenBank:WP_223964853.1;Name=WP_223964853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880711.1;locus_tag=LDO45_RS28205;product=hypothetical protein;protein_id=WP_223964853.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 20170 20799 . + . ID=gene-LDO45_RS28210;Name=LDO45_RS28210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28210;old_locus_tag=BDI4_670029 NZ_CAJZAS010000224.1 Protein Homology CDS 20170 20799 . + 0 ID=cds-WP_223964854.1;Parent=gene-LDO45_RS28210;Dbxref=GenBank:WP_223964854.1;Name=WP_223964854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498820.1;locus_tag=LDO45_RS28210;product=LysE family translocator;protein_id=WP_223964854.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 20844 22169 . - . ID=gene-LDO45_RS28215;Name=LDO45_RS28215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28215;old_locus_tag=BDI4_670030 NZ_CAJZAS010000224.1 Protein Homology CDS 20844 22169 . - 0 ID=cds-WP_223964855.1;Parent=gene-LDO45_RS28215;Dbxref=GenBank:WP_223964855.1;Name=WP_223964855.1;Ontology_term=GO:0006468,GO:0004672,GO:0005515,GO:0005524;gbkey=CDS;go_function=protein kinase activity|0004672||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757708.1;locus_tag=LDO45_RS28215;product=leucine-rich repeat-containing protein kinase family protein;protein_id=WP_223964855.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 22310 22394 . + . ID=gene-LDO45_RS28220;Name=LDO45_RS28220;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS28220;old_locus_tag=BDI4_TRNA21 NZ_CAJZAS010000224.1 tRNAscan-SE tRNA 22310 22394 . + . ID=rna-LDO45_RS28220;Parent=gene-LDO45_RS28220;anticodon=(pos:22344..22346);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS28220;product=tRNA-Leu NZ_CAJZAS010000224.1 tRNAscan-SE exon 22310 22394 . + . ID=exon-LDO45_RS28220-1;Parent=rna-LDO45_RS28220;anticodon=(pos:22344..22346);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS28220;product=tRNA-Leu NZ_CAJZAS010000224.1 RefSeq gene 22803 23720 . - . ID=gene-LDO45_RS28225;Name=LDO45_RS28225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28225;old_locus_tag=BDI4_670031 NZ_CAJZAS010000224.1 Protein Homology CDS 22803 23720 . - 0 ID=cds-WP_059819497.1;Parent=gene-LDO45_RS28225;Dbxref=GenBank:WP_059819497.1;Name=WP_059819497.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351554.1;locus_tag=LDO45_RS28225;product=LysR family transcriptional regulator;protein_id=WP_059819497.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 23822 24883 . - . ID=gene-LDO45_RS28230;Name=LDO45_RS28230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28230;old_locus_tag=BDI4_670032 NZ_CAJZAS010000224.1 Protein Homology CDS 23822 24883 . - 0 ID=cds-WP_223964856.1;Parent=gene-LDO45_RS28230;Dbxref=GenBank:WP_223964856.1;Name=WP_223964856.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: protein motif:HMM:NF024996.5;locus_tag=LDO45_RS28230;product=porin;protein_id=WP_223964856.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 25459 25794 . - . ID=gene-LDO45_RS28235;Name=LDO45_RS28235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28235;old_locus_tag=BDI4_670034 NZ_CAJZAS010000224.1 Protein Homology CDS 25459 25794 . - 0 ID=cds-WP_223964857.1;Parent=gene-LDO45_RS28235;Dbxref=GenBank:WP_223964857.1;Name=WP_223964857.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016244.5;locus_tag=LDO45_RS28235;product=DUF485 domain-containing protein;protein_id=WP_223964857.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 25809 27488 . - . ID=gene-LDO45_RS28240;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=LDO45_RS28240;old_locus_tag=BDI4_670035 NZ_CAJZAS010000224.1 Protein Homology CDS 25809 27488 . - 0 ID=cds-WP_223964858.1;Parent=gene-LDO45_RS28240;Dbxref=GenBank:WP_223964858.1;Name=WP_223964858.1;Note=member of the sodium:solute symporter family%3B cotranscribed with the acs gene which encodes acetyl coenzyme A synthase%3B mutations affect acetate uptake;gbkey=CDS;gene=actP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011617181.1;locus_tag=LDO45_RS28240;product=cation acetate symporter;protein_id=WP_223964858.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 27539 28696 . - . ID=gene-LDO45_RS28245;Name=LDO45_RS28245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28245;old_locus_tag=BDI4_670036 NZ_CAJZAS010000224.1 Protein Homology CDS 27539 28696 . - 0 ID=cds-WP_223964859.1;Parent=gene-LDO45_RS28245;Dbxref=GenBank:WP_223964859.1;Name=WP_223964859.1;Ontology_term=GO:0016787,GO:0016810;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006220469.1;locus_tag=LDO45_RS28245;product=M20 aminoacylase family protein;protein_id=WP_223964859.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq pseudogene 29027 29728 . - . ID=gene-LDO45_RS28250;Name=LDO45_RS28250;end_range=29728,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS28250;old_locus_tag=BDI4_670037;partial=true;pseudo=true NZ_CAJZAS010000224.1 Protein Homology CDS 29027 29728 . - 0 ID=cds-LDO45_RS28250;Parent=gene-LDO45_RS28250;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=29728,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366660.1;locus_tag=LDO45_RS28250;partial=true;product=LysR substrate-binding domain-containing protein;pseudo=true;transl_table=11 NZ_CAJZAS010000224.1 RefSeq pseudogene 29722 30147 . + . ID=gene-LDO45_RS28255;Name=LDO45_RS28255;end_range=30147,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS28255;partial=true;pseudo=true;start_range=.,29722 NZ_CAJZAS010000224.1 Protein Homology CDS 29722 30147 . + 0 ID=cds-LDO45_RS28255;Parent=gene-LDO45_RS28255;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0008483,GO:0030170;end_range=30147,.;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007176061.1;locus_tag=LDO45_RS28255;partial=true;product=aminotransferase class III-fold pyridoxal phosphate-dependent enzyme;pseudo=true;start_range=.,29722;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 30192 31115 . - . ID=gene-LDO45_RS28260;Name=LDO45_RS28260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28260;old_locus_tag=BDI4_670039 NZ_CAJZAS010000224.1 Protein Homology CDS 30192 31115 . - 0 ID=cds-WP_223964860.1;Parent=gene-LDO45_RS28260;Dbxref=GenBank:WP_223964860.1;Name=WP_223964860.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF012635.5;locus_tag=LDO45_RS28260;product=fimbrial protein;protein_id=WP_223964860.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 31142 33703 . - . ID=gene-LDO45_RS28265;Name=LDO45_RS28265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28265;old_locus_tag=BDI4_670040 NZ_CAJZAS010000224.1 Protein Homology CDS 31142 33703 . - 0 ID=cds-WP_223964861.1;Parent=gene-LDO45_RS28265;Dbxref=GenBank:WP_223964861.1;Name=WP_223964861.1;Ontology_term=GO:0009297,GO:0015473;gbkey=CDS;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399069.1;locus_tag=LDO45_RS28265;product=fimbria/pilus outer membrane usher protein;protein_id=WP_223964861.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 33866 34597 . - . ID=gene-LDO45_RS28270;Name=LDO45_RS28270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28270;old_locus_tag=BDI4_670041 NZ_CAJZAS010000224.1 Protein Homology CDS 33866 34597 . - 0 ID=cds-WP_223964889.1;Parent=gene-LDO45_RS28270;Dbxref=GenBank:WP_223964889.1;Name=WP_223964889.1;Ontology_term=GO:0061077;gbkey=CDS;go_process=chaperone-mediated protein folding|0061077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761535.1;locus_tag=LDO45_RS28270;product=molecular chaperone;protein_id=WP_223964889.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 34749 35303 . - . ID=gene-LDO45_RS28275;Name=LDO45_RS28275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28275;old_locus_tag=BDI4_670042 NZ_CAJZAS010000224.1 Protein Homology CDS 34749 35303 . - 0 ID=cds-WP_223964862.1;Parent=gene-LDO45_RS28275;Dbxref=GenBank:WP_223964862.1;Name=WP_223964862.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399071.1;locus_tag=LDO45_RS28275;product=fimbrial protein;protein_id=WP_223964862.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 36414 37115 . - . ID=gene-LDO45_RS28280;Name=LDO45_RS28280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28280;old_locus_tag=BDI4_670045 NZ_CAJZAS010000224.1 Protein Homology CDS 36414 37115 . - 0 ID=cds-WP_006484776.1;Parent=gene-LDO45_RS28280;Dbxref=GenBank:WP_006484776.1;Name=WP_006484776.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006161614.1;locus_tag=LDO45_RS28280;product=ABC transporter ATP-binding protein;protein_id=WP_006484776.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 37115 37888 . - . ID=gene-LDO45_RS28285;Name=livG;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=LDO45_RS28285;old_locus_tag=BDI4_670046 NZ_CAJZAS010000224.1 Protein Homology CDS 37115 37888 . - 0 ID=cds-WP_059534291.1;Parent=gene-LDO45_RS28285;Dbxref=GenBank:WP_059534291.1;Name=WP_059534291.1;Ontology_term=GO:0005524;gbkey=CDS;gene=livG;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396442.1;locus_tag=LDO45_RS28285;product=high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG;protein_id=WP_059534291.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 37885 39156 . - . ID=gene-LDO45_RS28290;Name=LDO45_RS28290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28290;old_locus_tag=BDI4_670047 NZ_CAJZAS010000224.1 Protein Homology CDS 37885 39156 . - 0 ID=cds-WP_059447699.1;Parent=gene-LDO45_RS28290;Dbxref=GenBank:WP_059447699.1;Name=WP_059447699.1;Ontology_term=GO:0015658,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089869.1;locus_tag=LDO45_RS28290;product=high-affinity branched-chain amino acid ABC transporter permease LivM;protein_id=WP_059447699.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 39168 40094 . - . ID=gene-LDO45_RS28295;Name=livH;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=LDO45_RS28295;old_locus_tag=BDI4_670048 NZ_CAJZAS010000224.1 Protein Homology CDS 39168 40094 . - 0 ID=cds-WP_006484734.1;Parent=gene-LDO45_RS28295;Dbxref=GenBank:WP_006484734.1;Name=WP_006484734.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=livH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523160.1;locus_tag=LDO45_RS28295;product=high-affinity branched-chain amino acid ABC transporter permease LivH;protein_id=WP_006484734.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 40268 41386 . - . ID=gene-LDO45_RS28300;Name=LDO45_RS28300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28300;old_locus_tag=BDI4_670049 NZ_CAJZAS010000224.1 Protein Homology CDS 40268 41386 . - 0 ID=cds-WP_059534285.1;Parent=gene-LDO45_RS28300;Dbxref=GenBank:WP_059534285.1;Name=WP_059534285.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009907961.1;locus_tag=LDO45_RS28300;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_059534285.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 42198 42818 . + . ID=gene-LDO45_RS28305;Name=LDO45_RS28305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28305;old_locus_tag=BDI4_670053 NZ_CAJZAS010000224.1 Protein Homology CDS 42198 42818 . + 0 ID=cds-WP_223964863.1;Parent=gene-LDO45_RS28305;Dbxref=GenBank:WP_223964863.1;Name=WP_223964863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760973.1;locus_tag=LDO45_RS28305;product=hypothetical protein;protein_id=WP_223964863.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 42876 43385 . - . ID=gene-LDO45_RS28310;Name=LDO45_RS28310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28310;old_locus_tag=BDI4_670054 NZ_CAJZAS010000224.1 Protein Homology CDS 42876 43385 . - 0 ID=cds-WP_059702293.1;Parent=gene-LDO45_RS28310;Dbxref=GenBank:WP_059702293.1;Name=WP_059702293.1;Ontology_term=GO:0015288,GO:0042834;gbkey=CDS;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547147.1;locus_tag=LDO45_RS28310;product=OmpA family protein;protein_id=WP_059702293.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 43468 44736 . - . ID=gene-LDO45_RS28315;Name=LDO45_RS28315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28315;old_locus_tag=BDI4_670055 NZ_CAJZAS010000224.1 Protein Homology CDS 43468 44736 . - 0 ID=cds-WP_223964864.1;Parent=gene-LDO45_RS28315;Dbxref=GenBank:WP_223964864.1;Name=WP_223964864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484728.1;locus_tag=LDO45_RS28315;product=diguanylate cyclase domain-containing protein;protein_id=WP_223964864.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 44733 45440 . - . ID=gene-LDO45_RS28320;Name=LDO45_RS28320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28320;old_locus_tag=BDI4_670056 NZ_CAJZAS010000224.1 Protein Homology CDS 44733 45440 . - 0 ID=cds-WP_223964890.1;Parent=gene-LDO45_RS28320;Dbxref=GenBank:WP_223964890.1;Name=WP_223964890.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366677.1;locus_tag=LDO45_RS28320;product=YfiR family protein;protein_id=WP_223964890.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 45868 47109 . + . ID=gene-LDO45_RS28325;Name=LDO45_RS28325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28325;old_locus_tag=BDI4_670057 NZ_CAJZAS010000224.1 Protein Homology CDS 45868 47109 . + 0 ID=cds-WP_059534263.1;Parent=gene-LDO45_RS28325;Dbxref=GenBank:WP_059534263.1;Name=WP_059534263.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414028.1;locus_tag=LDO45_RS28325;product=FAD-binding oxidoreductase;protein_id=WP_059534263.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 47126 47887 . - . ID=gene-LDO45_RS28330;Name=LDO45_RS28330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28330;old_locus_tag=BDI4_670058 NZ_CAJZAS010000224.1 Protein Homology CDS 47126 47887 . - 0 ID=cds-WP_059534261.1;Parent=gene-LDO45_RS28330;Dbxref=GenBank:WP_059534261.1;Name=WP_059534261.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756124.1;locus_tag=LDO45_RS28330;product=FadR/GntR family transcriptional regulator;protein_id=WP_059534261.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 47962 48852 . - . ID=gene-LDO45_RS28335;Name=LDO45_RS28335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28335;old_locus_tag=BDI4_670059 NZ_CAJZAS010000224.1 Protein Homology CDS 47962 48852 . - 0 ID=cds-WP_223964865.1;Parent=gene-LDO45_RS28335;Dbxref=GenBank:WP_223964865.1;Name=WP_223964865.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547138.1;locus_tag=LDO45_RS28335;product=amidohydrolase;protein_id=WP_223964865.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 48896 49837 . - . ID=gene-LDO45_RS28340;Name=LDO45_RS28340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28340;old_locus_tag=BDI4_670060 NZ_CAJZAS010000224.1 Protein Homology CDS 48896 49837 . - 0 ID=cds-WP_059534259.1;Parent=gene-LDO45_RS28340;Dbxref=GenBank:WP_059534259.1;Name=WP_059534259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339568.1;locus_tag=LDO45_RS28340;product=ABC transporter substrate-binding protein;protein_id=WP_059534259.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 49914 50951 . - . ID=gene-LDO45_RS28345;Name=LDO45_RS28345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28345;old_locus_tag=BDI4_670061 NZ_CAJZAS010000224.1 Protein Homology CDS 49914 50951 . - 0 ID=cds-WP_223964866.1;Parent=gene-LDO45_RS28345;Dbxref=GenBank:WP_223964866.1;Name=WP_223964866.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498773.1;locus_tag=LDO45_RS28345;product=ABC transporter permease;protein_id=WP_223964866.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 50982 52523 . - . ID=gene-LDO45_RS28350;Name=LDO45_RS28350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28350;old_locus_tag=BDI4_670062 NZ_CAJZAS010000224.1 Protein Homology CDS 50982 52523 . - 0 ID=cds-WP_059534255.1;Parent=gene-LDO45_RS28350;Dbxref=GenBank:WP_059534255.1;Name=WP_059534255.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898578.1;locus_tag=LDO45_RS28350;product=sugar ABC transporter ATP-binding protein;protein_id=WP_059534255.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 52536 53312 . - . ID=gene-LDO45_RS28355;Name=LDO45_RS28355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28355;old_locus_tag=BDI4_670063 NZ_CAJZAS010000224.1 Protein Homology CDS 52536 53312 . - 0 ID=cds-WP_223964867.1;Parent=gene-LDO45_RS28355;Dbxref=GenBank:WP_223964867.1;Name=WP_223964867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749502.1;locus_tag=LDO45_RS28355;product=SDR family oxidoreductase;protein_id=WP_223964867.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 53401 54678 . - . ID=gene-LDO45_RS28360;Name=LDO45_RS28360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28360;old_locus_tag=BDI4_670064 NZ_CAJZAS010000224.1 Protein Homology CDS 53401 54678 . - 0 ID=cds-WP_059819518.1;Parent=gene-LDO45_RS28360;Dbxref=GenBank:WP_059819518.1;Name=WP_059819518.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766342.1;locus_tag=LDO45_RS28360;product=L-fuconate dehydratase;protein_id=WP_059819518.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 54702 55544 . - . ID=gene-LDO45_RS28365;Name=LDO45_RS28365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28365;old_locus_tag=BDI4_670065 NZ_CAJZAS010000224.1 Protein Homology CDS 54702 55544 . - 0 ID=cds-WP_059692054.1;Parent=gene-LDO45_RS28365;Dbxref=GenBank:WP_059692054.1;Name=WP_059692054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898575.1;locus_tag=LDO45_RS28365;product=ureidoglycolate lyase;protein_id=WP_059692054.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 55611 56375 . - . ID=gene-LDO45_RS28370;Name=LDO45_RS28370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28370;old_locus_tag=BDI4_670066 NZ_CAJZAS010000224.1 Protein Homology CDS 55611 56375 . - 0 ID=cds-WP_059534356.1;Parent=gene-LDO45_RS28370;Dbxref=GenBank:WP_059534356.1;Name=WP_059534356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089736.1;locus_tag=LDO45_RS28370;product=SDR family oxidoreductase;protein_id=WP_059534356.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 57053 57343 . + . ID=gene-LDO45_RS28375;Name=LDO45_RS28375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28375;old_locus_tag=BDI4_670068 NZ_CAJZAS010000224.1 Protein Homology CDS 57053 57343 . + 0 ID=cds-WP_044847789.1;Parent=gene-LDO45_RS28375;Dbxref=GenBank:WP_044847789.1;Name=WP_044847789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547132.1;locus_tag=LDO45_RS28375;product=DUF3331 domain-containing protein;protein_id=WP_044847789.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 57488 58474 . + . ID=gene-LDO45_RS28380;Name=LDO45_RS28380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28380;old_locus_tag=BDI4_670069 NZ_CAJZAS010000224.1 Protein Homology CDS 57488 58474 . + 0 ID=cds-WP_223964868.1;Parent=gene-LDO45_RS28380;Dbxref=GenBank:WP_223964868.1;Name=WP_223964868.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756116.1;locus_tag=LDO45_RS28380;product=oxidoreductase;protein_id=WP_223964868.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 58689 58991 . + . ID=gene-LDO45_RS28385;Name=LDO45_RS28385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28385;old_locus_tag=BDI4_670072 NZ_CAJZAS010000224.1 Protein Homology CDS 58689 58991 . + 0 ID=cds-WP_223964869.1;Parent=gene-LDO45_RS28385;Dbxref=GenBank:WP_223964869.1;Name=WP_223964869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723947.1;locus_tag=LDO45_RS28385;product=DUF4148 domain-containing protein;protein_id=WP_223964869.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 59184 60380 . - . ID=gene-LDO45_RS28390;Name=LDO45_RS28390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28390;old_locus_tag=BDI4_670073 NZ_CAJZAS010000224.1 Protein Homology CDS 59184 60380 . - 0 ID=cds-WP_223964870.1;Parent=gene-LDO45_RS28390;Dbxref=GenBank:WP_223964870.1;Name=WP_223964870.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756115.1;locus_tag=LDO45_RS28390;product=TauD/TfdA family dioxygenase;protein_id=WP_223964870.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 60403 61359 . - . ID=gene-LDO45_RS28395;Name=LDO45_RS28395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28395;old_locus_tag=BDI4_670074 NZ_CAJZAS010000224.1 Protein Homology CDS 60403 61359 . - 0 ID=cds-WP_223964871.1;Parent=gene-LDO45_RS28395;Dbxref=GenBank:WP_223964871.1;Name=WP_223964871.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354223.1;locus_tag=LDO45_RS28395;product=alpha/beta hydrolase;protein_id=WP_223964871.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 61417 61905 . - . ID=gene-LDO45_RS28400;Name=LDO45_RS28400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28400;old_locus_tag=BDI4_670075 NZ_CAJZAS010000224.1 Protein Homology CDS 61417 61905 . - 0 ID=cds-WP_223964872.1;Parent=gene-LDO45_RS28400;Dbxref=GenBank:WP_223964872.1;Name=WP_223964872.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898568.1;locus_tag=LDO45_RS28400;product=thioesterase family protein;protein_id=WP_223964872.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 61912 62877 . - . ID=gene-LDO45_RS28405;Name=LDO45_RS28405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28405;old_locus_tag=BDI4_670076 NZ_CAJZAS010000224.1 Protein Homology CDS 61912 62877 . - 0 ID=cds-WP_059702321.1;Parent=gene-LDO45_RS28405;Dbxref=GenBank:WP_059702321.1;Name=WP_059702321.1;Ontology_term=GO:0006631,GO:0016616,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484739.1;locus_tag=LDO45_RS28405;product=L-carnitine dehydrogenase;protein_id=WP_059702321.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 62964 63893 . - . ID=gene-LDO45_RS28410;Name=LDO45_RS28410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28410;old_locus_tag=BDI4_670077 NZ_CAJZAS010000224.1 Protein Homology CDS 62964 63893 . - 0 ID=cds-WP_059534240.1;Parent=gene-LDO45_RS28410;Dbxref=GenBank:WP_059534240.1;Name=WP_059534240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396403.1;locus_tag=LDO45_RS28410;product=3-keto-5-aminohexanoate cleavage protein;protein_id=WP_059534240.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 63994 64947 . - . ID=gene-LDO45_RS28415;Name=LDO45_RS28415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28415;old_locus_tag=BDI4_670078 NZ_CAJZAS010000224.1 Protein Homology CDS 63994 64947 . - 0 ID=cds-WP_059692048.1;Parent=gene-LDO45_RS28415;Dbxref=GenBank:WP_059692048.1;Name=WP_059692048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017328652.1;locus_tag=LDO45_RS28415;product=choline ABC transporter substrate-binding protein;protein_id=WP_059692048.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 65265 66236 . - . ID=gene-LDO45_RS28420;Name=LDO45_RS28420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28420;old_locus_tag=BDI4_670079 NZ_CAJZAS010000224.1 Protein Homology CDS 65265 66236 . - 0 ID=cds-WP_059534236.1;Parent=gene-LDO45_RS28420;Dbxref=GenBank:WP_059534236.1;Name=WP_059534236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898561.1;locus_tag=LDO45_RS28420;product=LysR substrate-binding domain-containing protein;protein_id=WP_059534236.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 66372 68672 . + . ID=gene-LDO45_RS28425;Name=LDO45_RS28425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28425;old_locus_tag=BDI4_670080 NZ_CAJZAS010000224.1 Protein Homology CDS 66372 68672 . + 0 ID=cds-WP_223964873.1;Parent=gene-LDO45_RS28425;Dbxref=GenBank:WP_223964873.1;Name=WP_223964873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756108.1;locus_tag=LDO45_RS28425;product=NADP-dependent malic enzyme;protein_id=WP_223964873.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 68856 69425 . - . ID=gene-LDO45_RS28430;Name=LDO45_RS28430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28430;old_locus_tag=BDI4_670081 NZ_CAJZAS010000224.1 Protein Homology CDS 68856 69425 . - 0 ID=cds-WP_223964874.1;Parent=gene-LDO45_RS28430;Dbxref=GenBank:WP_223964874.1;Name=WP_223964874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484534.1;locus_tag=LDO45_RS28430;product=YdeI family protein;protein_id=WP_223964874.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 69511 70638 . - . ID=gene-LDO45_RS28435;Name=LDO45_RS28435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28435;old_locus_tag=BDI4_670082 NZ_CAJZAS010000224.1 Protein Homology CDS 69511 70638 . - 0 ID=cds-WP_223964875.1;Parent=gene-LDO45_RS28435;Dbxref=GenBank:WP_223964875.1;Name=WP_223964875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723956.1;locus_tag=LDO45_RS28435;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_223964875.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 70811 71728 . - . ID=gene-LDO45_RS28440;Name=LDO45_RS28440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28440;old_locus_tag=BDI4_670083 NZ_CAJZAS010000224.1 Protein Homology CDS 70811 71728 . - 0 ID=cds-WP_059692046.1;Parent=gene-LDO45_RS28440;Dbxref=GenBank:WP_059692046.1;Name=WP_059692046.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012371928.1;locus_tag=LDO45_RS28440;product=LysR family transcriptional regulator;protein_id=WP_059692046.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 71871 72635 . + . ID=gene-LDO45_RS28445;Name=LDO45_RS28445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28445;old_locus_tag=BDI4_670084 NZ_CAJZAS010000224.1 Protein Homology CDS 71871 72635 . + 0 ID=cds-WP_059702324.1;Parent=gene-LDO45_RS28445;Dbxref=GenBank:WP_059702324.1;Name=WP_059702324.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013342584.1;locus_tag=LDO45_RS28445;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_059702324.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 72803 73840 . - . ID=gene-LDO45_RS28450;Name=LDO45_RS28450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28450;old_locus_tag=BDI4_670085 NZ_CAJZAS010000224.1 Protein Homology CDS 72803 73840 . - 0 ID=cds-WP_223964876.1;Parent=gene-LDO45_RS28450;Dbxref=GenBank:WP_223964876.1;Name=WP_223964876.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008917087.1;locus_tag=LDO45_RS28450;product=GlxA family transcriptional regulator;protein_id=WP_223964876.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 73946 74482 . + . ID=gene-LDO45_RS28455;Name=LDO45_RS28455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28455;old_locus_tag=BDI4_670086 NZ_CAJZAS010000224.1 Protein Homology CDS 73946 74482 . + 0 ID=cds-WP_223964877.1;Parent=gene-LDO45_RS28455;Dbxref=GenBank:WP_223964877.1;Name=WP_223964877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008917089.1;locus_tag=LDO45_RS28455;product=Tautomerase enzyme;protein_id=WP_223964877.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 74497 74973 . + . ID=gene-LDO45_RS28460;Name=LDO45_RS28460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28460;old_locus_tag=BDI4_670087 NZ_CAJZAS010000224.1 Protein Homology CDS 74497 74973 . + 0 ID=cds-WP_223964878.1;Parent=gene-LDO45_RS28460;Dbxref=GenBank:WP_223964878.1;Name=WP_223964878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013093349.1;locus_tag=LDO45_RS28460;product=hypothetical protein;protein_id=WP_223964878.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 74954 75352 . + . ID=gene-LDO45_RS28465;Name=LDO45_RS28465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28465;old_locus_tag=BDI4_670088 NZ_CAJZAS010000224.1 Protein Homology CDS 74954 75352 . + 0 ID=cds-WP_223964879.1;Parent=gene-LDO45_RS28465;Dbxref=GenBank:WP_223964879.1;Name=WP_223964879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019451444.1;locus_tag=LDO45_RS28465;product=muconolactone Delta-isomerase family protein;protein_id=WP_223964879.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 75543 76517 . + . ID=gene-LDO45_RS28470;Name=LDO45_RS28470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28470;old_locus_tag=BDI4_670089 NZ_CAJZAS010000224.1 Protein Homology CDS 75543 76517 . + 0 ID=cds-WP_223964880.1;Parent=gene-LDO45_RS28470;Dbxref=GenBank:WP_223964880.1;Name=WP_223964880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013093351.1;locus_tag=LDO45_RS28470;product=alpha/beta fold hydrolase;protein_id=WP_223964880.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 76760 77704 . + . ID=gene-LDO45_RS28475;Name=LDO45_RS28475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28475;old_locus_tag=BDI4_670090 NZ_CAJZAS010000224.1 Protein Homology CDS 76760 77704 . + 0 ID=cds-WP_059534215.1;Parent=gene-LDO45_RS28475;Dbxref=GenBank:WP_059534215.1;Name=WP_059534215.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898548.1;locus_tag=LDO45_RS28475;product=GlxA family transcriptional regulator;protein_id=WP_059534215.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 78183 79895 . + . ID=gene-LDO45_RS28480;Name=LDO45_RS28480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28480;old_locus_tag=BDI4_670091 NZ_CAJZAS010000224.1 Protein Homology CDS 78183 79895 . + 0 ID=cds-WP_223964881.1;Parent=gene-LDO45_RS28480;Dbxref=GenBank:WP_223964881.1;Name=WP_223964881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547114.1;locus_tag=LDO45_RS28480;product=M36 family metallopeptidase;protein_id=WP_223964881.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 79975 81228 . + . ID=gene-LDO45_RS28485;Name=LDO45_RS28485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28485;old_locus_tag=BDI4_670092 NZ_CAJZAS010000224.1 Protein Homology CDS 79975 81228 . + 0 ID=cds-WP_223964882.1;Parent=gene-LDO45_RS28485;Dbxref=GenBank:WP_223964882.1;Name=WP_223964882.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480672.1;locus_tag=LDO45_RS28485;product=M20/M25/M40 family metallo-hydrolase;protein_id=WP_223964882.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 81350 81712 . + . ID=gene-LDO45_RS28490;Name=LDO45_RS28490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28490;old_locus_tag=BDI4_670093 NZ_CAJZAS010000224.1 Protein Homology CDS 81350 81712 . + 0 ID=cds-WP_059692038.1;Parent=gene-LDO45_RS28490;Dbxref=GenBank:WP_059692038.1;Name=WP_059692038.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880759.1;locus_tag=LDO45_RS28490;product=YbjQ family protein;protein_id=WP_059692038.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 81719 82969 . - . ID=gene-LDO45_RS28495;Name=LDO45_RS28495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28495;old_locus_tag=BDI4_670094 NZ_CAJZAS010000224.1 Protein Homology CDS 81719 82969 . - 0 ID=cds-WP_059819536.1;Parent=gene-LDO45_RS28495;Dbxref=GenBank:WP_059819536.1;Name=WP_059819536.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659457.1;locus_tag=LDO45_RS28495;product=MFS transporter;protein_id=WP_059819536.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 83167 84306 . - . ID=gene-LDO45_RS28500;Name=LDO45_RS28500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28500;old_locus_tag=BDI4_670095 NZ_CAJZAS010000224.1 Protein Homology CDS 83167 84306 . - 0 ID=cds-WP_059534205.1;Parent=gene-LDO45_RS28500;Dbxref=GenBank:WP_059534205.1;Name=WP_059534205.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898544.1;locus_tag=LDO45_RS28500;product=porin;protein_id=WP_059534205.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 84563 85531 . - . ID=gene-LDO45_RS28505;Name=choX;gbkey=Gene;gene=choX;gene_biotype=protein_coding;locus_tag=LDO45_RS28505;old_locus_tag=BDI4_670096 NZ_CAJZAS010000224.1 Protein Homology CDS 84563 85531 . - 0 ID=cds-WP_223964883.1;Parent=gene-LDO45_RS28505;Dbxref=GenBank:WP_223964883.1;Name=WP_223964883.1;Ontology_term=GO:0015871,GO:0033265,GO:0042597;gbkey=CDS;gene=choX;go_component=periplasmic space|0042597||IEA;go_function=choline binding|0033265||IEA;go_process=choline transport|0015871||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756091.1;locus_tag=LDO45_RS28505;product=choline ABC transporter substrate-binding protein;protein_id=WP_223964883.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 85577 87112 . - . ID=gene-LDO45_RS28510;Name=betC;gbkey=Gene;gene=betC;gene_biotype=protein_coding;locus_tag=LDO45_RS28510;old_locus_tag=BDI4_670097 NZ_CAJZAS010000224.1 Protein Homology CDS 85577 87112 . - 0 ID=cds-WP_223964884.1;Parent=gene-LDO45_RS28510;Dbxref=GenBank:WP_223964884.1;Name=WP_223964884.1;Ontology_term=GO:0008484;gbkey=CDS;gene=betC;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756090.1;locus_tag=LDO45_RS28510;product=choline-sulfatase;protein_id=WP_223964884.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 87315 88241 . + . ID=gene-LDO45_RS28515;Name=LDO45_RS28515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28515;old_locus_tag=BDI4_670098 NZ_CAJZAS010000224.1 Protein Homology CDS 87315 88241 . + 0 ID=cds-WP_082725391.1;Parent=gene-LDO45_RS28515;Dbxref=GenBank:WP_082725391.1;Name=WP_082725391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880764.1;locus_tag=LDO45_RS28515;product=choline sulfate utilization transcriptional regulator;protein_id=WP_082725391.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 88494 89381 . + . ID=gene-LDO45_RS28520;Name=LDO45_RS28520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28520;old_locus_tag=BDI4_670099 NZ_CAJZAS010000224.1 Protein Homology CDS 88494 89381 . + 0 ID=cds-WP_223964885.1;Parent=gene-LDO45_RS28520;Dbxref=GenBank:WP_223964885.1;Name=WP_223964885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723968.1;locus_tag=LDO45_RS28520;product=formyltetrahydrofolate deformylase;protein_id=WP_223964885.1;transl_table=11 NZ_CAJZAS010000224.1 RefSeq gene 89530 90827 . - . ID=gene-LDO45_RS28525;Name=LDO45_RS28525;end_range=90827,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28525;old_locus_tag=BDI4_670100;partial=true NZ_CAJZAS010000224.1 Protein Homology CDS 89530 90827 . - 2 ID=cds-WP_223964886.1;Parent=gene-LDO45_RS28525;Dbxref=GenBank:WP_223964886.1;Name=WP_223964886.1;Ontology_term=GO:0055085,GO:0022857;end_range=90827,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396370.1;locus_tag=LDO45_RS28525;partial=true;product=APC family permease;protein_id=WP_223964886.1;transl_table=11 ##sequence-region NZ_CAJZAS010000225.1 1 17306 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000225.1 RefSeq region 1 17306 . + . ID=NZ_CAJZAS010000225.1:1..17306;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_68 NZ_CAJZAS010000225.1 RefSeq gene 1 529 . + . ID=gene-LDO45_RS28530;Name=LDO45_RS28530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28530;old_locus_tag=BDI4_680001;partial=true;start_range=.,1 NZ_CAJZAS010000225.1 Protein Homology CDS 1 529 . + 1 ID=cds-WP_374109557.1;Parent=gene-LDO45_RS28530;Dbxref=GenBank:WP_374109557.1;Name=WP_374109557.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410885.1;locus_tag=LDO45_RS28530;partial=true;product=MFS transporter;protein_id=WP_374109557.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000225.1 RefSeq gene 627 1265 . - . ID=gene-LDO45_RS28535;Name=LDO45_RS28535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28535;old_locus_tag=BDI4_680002 NZ_CAJZAS010000225.1 Protein Homology CDS 627 1265 . - 0 ID=cds-WP_059523917.1;Parent=gene-LDO45_RS28535;Dbxref=GenBank:WP_059523917.1;Name=WP_059523917.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214259.1;locus_tag=LDO45_RS28535;product=glutathione S-transferase family protein;protein_id=WP_059523917.1;transl_table=11 NZ_CAJZAS010000225.1 RefSeq gene 1380 2300 . + . ID=gene-LDO45_RS28540;Name=LDO45_RS28540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28540;old_locus_tag=BDI4_680004 NZ_CAJZAS010000225.1 Protein Homology CDS 1380 2300 . + 0 ID=cds-WP_223964891.1;Parent=gene-LDO45_RS28540;Dbxref=GenBank:WP_223964891.1;Name=WP_223964891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763239.1;locus_tag=LDO45_RS28540;product=LysR substrate-binding domain-containing protein;protein_id=WP_223964891.1;transl_table=11 NZ_CAJZAS010000225.1 RefSeq gene 2461 2745 . + . ID=gene-LDO45_RS28545;Name=LDO45_RS28545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28545;old_locus_tag=BDI4_680005 NZ_CAJZAS010000225.1 Protein Homology CDS 2461 2745 . + 0 ID=cds-WP_059691388.1;Parent=gene-LDO45_RS28545;Dbxref=GenBank:WP_059691388.1;Name=WP_059691388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895862.1;locus_tag=LDO45_RS28545;product=hypothetical protein;protein_id=WP_059691388.1;transl_table=11 NZ_CAJZAS010000225.1 RefSeq gene 2797 4917 . + . ID=gene-LDO45_RS28550;Name=LDO45_RS28550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28550;old_locus_tag=BDI4_680006 NZ_CAJZAS010000225.1 Protein Homology CDS 2797 4917 . + 0 ID=cds-WP_059523911.1;Parent=gene-LDO45_RS28550;Dbxref=GenBank:WP_059523911.1;Name=WP_059523911.1;Ontology_term=GO:0034480;gbkey=CDS;go_function=phosphatidylcholine phospholipase C activity|0034480||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760571.1;locus_tag=LDO45_RS28550;product=phosphocholine-specific phospholipase C;protein_id=WP_059523911.1;transl_table=11 NZ_CAJZAS010000225.1 RefSeq pseudogene 4972 5666 . - . ID=gene-LDO45_RS28555;Name=LDO45_RS28555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS28555;pseudo=true NZ_CAJZAS010000225.1 Protein Homology CDS 4972 5666 . - 0 ID=cds-LDO45_RS28555;Parent=gene-LDO45_RS28555;Note=frameshifted%3B too many ambiguous residues;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012431510.1;locus_tag=LDO45_RS28555;product=RBBP9/YdeN family alpha/beta hydrolase;pseudo=true;transl_table=11 NZ_CAJZAS010000225.1 RefSeq gene 5900 6337 . + . ID=gene-LDO45_RS28560;Name=LDO45_RS28560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28560;old_locus_tag=BDI4_680010 NZ_CAJZAS010000225.1 Protein Homology CDS 5900 6337 . + 0 ID=cds-WP_044846155.1;Parent=gene-LDO45_RS28560;Dbxref=GenBank:WP_044846155.1;Name=WP_044846155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893323.1;locus_tag=LDO45_RS28560;product=VOC family protein;protein_id=WP_044846155.1;transl_table=11 NZ_CAJZAS010000225.1 RefSeq gene 6342 7283 . + . ID=gene-LDO45_RS28565;Name=LDO45_RS28565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28565;old_locus_tag=BDI4_680011 NZ_CAJZAS010000225.1 Protein Homology CDS 6342 7283 . + 0 ID=cds-WP_223964892.1;Parent=gene-LDO45_RS28565;Dbxref=GenBank:WP_223964892.1;Name=WP_223964892.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214267.1;locus_tag=LDO45_RS28565;product=glyoxylate/hydroxypyruvate reductase A;protein_id=WP_223964892.1;transl_table=11 NZ_CAJZAS010000225.1 RefSeq gene 7313 8245 . + . ID=gene-LDO45_RS28570;Name=LDO45_RS28570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28570;old_locus_tag=BDI4_680012 NZ_CAJZAS010000225.1 Protein Homology CDS 7313 8245 . + 0 ID=cds-WP_059691385.1;Parent=gene-LDO45_RS28570;Dbxref=GenBank:WP_059691385.1;Name=WP_059691385.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364855.1;locus_tag=LDO45_RS28570;product=hydroxymethylglutaryl-CoA lyase;protein_id=WP_059691385.1;transl_table=11 NZ_CAJZAS010000225.1 RefSeq gene 8268 8774 . + . ID=gene-LDO45_RS28575;Name=LDO45_RS28575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28575;old_locus_tag=BDI4_680013 NZ_CAJZAS010000225.1 Protein Homology CDS 8268 8774 . + 0 ID=cds-WP_059523903.1;Parent=gene-LDO45_RS28575;Dbxref=GenBank:WP_059523903.1;Name=WP_059523903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525946.1;locus_tag=LDO45_RS28575;product=YbaK/EbsC family protein;protein_id=WP_059523903.1;transl_table=11 NZ_CAJZAS010000225.1 RefSeq gene 8771 8977 . + . ID=gene-LDO45_RS28580;Name=LDO45_RS28580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28580;old_locus_tag=BDI4_680014 NZ_CAJZAS010000225.1 Protein Homology CDS 8771 8977 . + 0 ID=cds-WP_006762224.1;Parent=gene-LDO45_RS28580;Dbxref=GenBank:WP_006762224.1;Name=WP_006762224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895855.1;locus_tag=LDO45_RS28580;product=DUF1289 domain-containing protein;protein_id=WP_006762224.1;transl_table=11 NZ_CAJZAS010000225.1 RefSeq gene 9272 10024 . + . ID=gene-LDO45_RS28585;Name=LDO45_RS28585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28585;old_locus_tag=BDI4_680015 NZ_CAJZAS010000225.1 Protein Homology CDS 9272 10024 . + 0 ID=cds-WP_223964893.1;Parent=gene-LDO45_RS28585;Dbxref=GenBank:WP_223964893.1;Name=WP_223964893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013093837.1;locus_tag=LDO45_RS28585;product=hypothetical protein;protein_id=WP_223964893.1;transl_table=11 NZ_CAJZAS010000225.1 RefSeq gene 10024 10509 . + . ID=gene-LDO45_RS28590;Name=LDO45_RS28590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28590;old_locus_tag=BDI4_680017 NZ_CAJZAS010000225.1 Protein Homology CDS 10024 10509 . + 0 ID=cds-WP_223964894.1;Parent=gene-LDO45_RS28590;Dbxref=GenBank:WP_223964894.1;Name=WP_223964894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006049426.1;locus_tag=LDO45_RS28590;product=hypothetical protein;protein_id=WP_223964894.1;transl_table=11 NZ_CAJZAS010000225.1 RefSeq gene 10796 11698 . - . ID=gene-LDO45_RS28595;Name=LDO45_RS28595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28595;old_locus_tag=BDI4_680018 NZ_CAJZAS010000225.1 Protein Homology CDS 10796 11698 . - 0 ID=cds-WP_223964895.1;Parent=gene-LDO45_RS28595;Dbxref=GenBank:WP_223964895.1;Name=WP_223964895.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546366.1;locus_tag=LDO45_RS28595;product=DMT family transporter;protein_id=WP_223964895.1;transl_table=11 NZ_CAJZAS010000225.1 RefSeq gene 11812 12306 . + . ID=gene-LDO45_RS28600;Name=LDO45_RS28600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28600;old_locus_tag=BDI4_680019 NZ_CAJZAS010000225.1 Protein Homology CDS 11812 12306 . + 0 ID=cds-WP_059523896.1;Parent=gene-LDO45_RS28600;Dbxref=GenBank:WP_059523896.1;Name=WP_059523896.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495467.1;locus_tag=LDO45_RS28600;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_059523896.1;transl_table=11 NZ_CAJZAS010000225.1 RefSeq gene 12355 13251 . - . ID=gene-LDO45_RS28605;Name=LDO45_RS28605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28605;old_locus_tag=BDI4_680020 NZ_CAJZAS010000225.1 Protein Homology CDS 12355 13251 . - 0 ID=cds-WP_223964896.1;Parent=gene-LDO45_RS28605;Dbxref=GenBank:WP_223964896.1;Name=WP_223964896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488641.1;locus_tag=LDO45_RS28605;product=alpha/beta fold hydrolase;protein_id=WP_223964896.1;transl_table=11 NZ_CAJZAS010000225.1 RefSeq gene 13531 14490 . + . ID=gene-LDO45_RS28610;Name=LDO45_RS28610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28610;old_locus_tag=BDI4_680021 NZ_CAJZAS010000225.1 Protein Homology CDS 13531 14490 . + 0 ID=cds-WP_223964897.1;Parent=gene-LDO45_RS28610;Dbxref=GenBank:WP_223964897.1;Name=WP_223964897.1;Ontology_term=GO:0004497;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488640.1;locus_tag=LDO45_RS28610;product=nitronate monooxygenase family protein;protein_id=WP_223964897.1;transl_table=11 NZ_CAJZAS010000225.1 RefSeq gene 14603 15565 . - . ID=gene-LDO45_RS28615;Name=LDO45_RS28615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28615;old_locus_tag=BDI4_680022 NZ_CAJZAS010000225.1 Protein Homology CDS 14603 15565 . - 0 ID=cds-WP_059523890.1;Parent=gene-LDO45_RS28615;Dbxref=GenBank:WP_059523890.1;Name=WP_059523890.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010113553.1;locus_tag=LDO45_RS28615;product=LysR family transcriptional regulator;protein_id=WP_059523890.1;transl_table=11 NZ_CAJZAS010000225.1 RefSeq gene 15739 16815 . - . ID=gene-LDO45_RS28620;Name=LDO45_RS28620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28620;old_locus_tag=BDI4_680023 NZ_CAJZAS010000225.1 Protein Homology CDS 15739 16815 . - 0 ID=cds-WP_059523888.1;Parent=gene-LDO45_RS28620;Dbxref=GenBank:WP_059523888.1;Name=WP_059523888.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407148.1;locus_tag=LDO45_RS28620;product=porin;protein_id=WP_059523888.1;transl_table=11 NZ_CAJZAS010000225.1 RefSeq pseudogene 17162 17306 . - . ID=gene-LDO45_RS28625;Name=LDO45_RS28625;end_range=17306,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS28625;old_locus_tag=BDI4_680025;partial=true;pseudo=true NZ_CAJZAS010000225.1 Protein Homology CDS 17162 17306 . - 1 ID=cds-LDO45_RS28625;Parent=gene-LDO45_RS28625;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=17306,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353418.1;locus_tag=LDO45_RS28625;partial=true;product=peptide-binding protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000226.1 1 66384 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000226.1 RefSeq region 1 66384 . + . ID=NZ_CAJZAS010000226.1:1..66384;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_69 NZ_CAJZAS010000226.1 RefSeq gene 1 302 . + . ID=gene-LDO45_RS28630;Name=LDO45_RS28630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28630;old_locus_tag=BDI4_690001;partial=true;start_range=.,1 NZ_CAJZAS010000226.1 Protein Homology CDS 1 302 . + 2 ID=cds-WP_290371044.1;Parent=gene-LDO45_RS28630;Dbxref=GenBank:WP_290371044.1;Name=WP_290371044.1;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880483.1;locus_tag=LDO45_RS28630;partial=true;product=NAD(P)-dependent oxidoreductase;protein_id=WP_290371044.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 463 1863 . + . ID=gene-LDO45_RS28635;Name=LDO45_RS28635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28635;old_locus_tag=BDI4_690002 NZ_CAJZAS010000226.1 Protein Homology CDS 463 1863 . + 0 ID=cds-WP_223964898.1;Parent=gene-LDO45_RS28635;Dbxref=GenBank:WP_223964898.1;Name=WP_223964898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749695.1;locus_tag=LDO45_RS28635;product=aspartate aminotransferase family protein;protein_id=WP_223964898.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 1949 2440 . + . ID=gene-LDO45_RS28640;Name=LDO45_RS28640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28640;old_locus_tag=BDI4_690003 NZ_CAJZAS010000226.1 Protein Homology CDS 1949 2440 . + 0 ID=cds-WP_006749694.1;Parent=gene-LDO45_RS28640;Dbxref=GenBank:WP_006749694.1;Name=WP_006749694.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880485.1;locus_tag=LDO45_RS28640;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_006749694.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 2549 4021 . + . ID=gene-LDO45_RS28645;Name=LDO45_RS28645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28645;old_locus_tag=BDI4_690004 NZ_CAJZAS010000226.1 Protein Homology CDS 2549 4021 . + 0 ID=cds-WP_223964899.1;Parent=gene-LDO45_RS28645;Dbxref=GenBank:WP_223964899.1;Name=WP_223964899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010100339.1;locus_tag=LDO45_RS28645;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_223964899.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 4212 5732 . + . ID=gene-LDO45_RS28650;Name=LDO45_RS28650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28650;old_locus_tag=BDI4_690006 NZ_CAJZAS010000226.1 Protein Homology CDS 4212 5732 . + 0 ID=cds-WP_223964900.1;Parent=gene-LDO45_RS28650;Dbxref=GenBank:WP_223964900.1;Name=WP_223964900.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749692.1;locus_tag=LDO45_RS28650;product=GGDEF domain-containing protein;protein_id=WP_223964900.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 5948 7906 . + . ID=gene-LDO45_RS28655;Name=LDO45_RS28655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28655;old_locus_tag=BDI4_690008 NZ_CAJZAS010000226.1 Protein Homology CDS 5948 7906 . + 0 ID=cds-WP_223964901.1;Parent=gene-LDO45_RS28655;Dbxref=GenBank:WP_223964901.1;Name=WP_223964901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372385.1;locus_tag=LDO45_RS28655;product=phosphatase PAP2 family protein;protein_id=WP_223964901.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 8229 10334 . + . ID=gene-LDO45_RS28660;Name=LDO45_RS28660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28660;old_locus_tag=BDI4_690009 NZ_CAJZAS010000226.1 Protein Homology CDS 8229 10334 . + 0 ID=cds-WP_223964902.1;Parent=gene-LDO45_RS28660;Dbxref=GenBank:WP_223964902.1;Name=WP_223964902.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758840.1;locus_tag=LDO45_RS28660;product=TonB-dependent siderophore receptor;protein_id=WP_223964902.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 10560 10853 . + . ID=gene-LDO45_RS28665;Name=LDO45_RS28665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28665 NZ_CAJZAS010000226.1 Protein Homology CDS 10560 10853 . + 0 ID=cds-WP_223964903.1;Parent=gene-LDO45_RS28665;Dbxref=GenBank:WP_223964903.1;Name=WP_223964903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009901383.1;locus_tag=LDO45_RS28665;product=hypothetical protein;protein_id=WP_223964903.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 11167 12024 . + . ID=gene-LDO45_RS28670;Name=LDO45_RS28670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28670;old_locus_tag=BDI4_690012 NZ_CAJZAS010000226.1 Protein Homology CDS 11167 12024 . + 0 ID=cds-WP_223964904.1;Parent=gene-LDO45_RS28670;Dbxref=GenBank:WP_223964904.1;Name=WP_223964904.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024109.5;locus_tag=LDO45_RS28670;product=alpha/beta fold hydrolase;protein_id=WP_223964904.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 12056 13402 . - . ID=gene-LDO45_RS28675;Name=LDO45_RS28675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28675;old_locus_tag=BDI4_690014 NZ_CAJZAS010000226.1 Protein Homology CDS 12056 13402 . - 0 ID=cds-WP_223964905.1;Parent=gene-LDO45_RS28675;Dbxref=GenBank:WP_223964905.1;Name=WP_223964905.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498148.1;locus_tag=LDO45_RS28675;product=MFS transporter;protein_id=WP_223964905.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 13698 14735 . + . ID=gene-LDO45_RS28680;Name=LDO45_RS28680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28680;old_locus_tag=BDI4_690015 NZ_CAJZAS010000226.1 Protein Homology CDS 13698 14735 . + 0 ID=cds-WP_223964906.1;Parent=gene-LDO45_RS28680;Dbxref=GenBank:WP_223964906.1;Name=WP_223964906.1;Ontology_term=GO:0006351,GO:0006355,GO:0045892,GO:0000976,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=transcription cis-regulatory region binding|0000976||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012336821.1;locus_tag=LDO45_RS28680;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_223964906.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 14978 16759 . + . ID=gene-LDO45_RS28685;Name=LDO45_RS28685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28685;old_locus_tag=BDI4_690016 NZ_CAJZAS010000226.1 Protein Homology CDS 14978 16759 . + 0 ID=cds-WP_223964907.1;Parent=gene-LDO45_RS28685;Dbxref=GenBank:WP_223964907.1;Name=WP_223964907.1;Ontology_term=GO:0016836,GO:0051536;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012217270.1;locus_tag=LDO45_RS28685;product=IlvD/Edd family dehydratase;protein_id=WP_223964907.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 16795 17988 . + . ID=gene-LDO45_RS28690;Name=LDO45_RS28690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28690;old_locus_tag=BDI4_690017 NZ_CAJZAS010000226.1 Protein Homology CDS 16795 17988 . + 0 ID=cds-WP_223964908.1;Parent=gene-LDO45_RS28690;Dbxref=GenBank:WP_223964908.1;Name=WP_223964908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020201682.1;locus_tag=LDO45_RS28690;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_223964908.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 18135 18305 . + . ID=gene-LDO45_RS28695;Name=LDO45_RS28695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28695;old_locus_tag=BDI4_690018 NZ_CAJZAS010000226.1 Protein Homology CDS 18135 18305 . + 0 ID=cds-WP_162999306.1;Parent=gene-LDO45_RS28695;Dbxref=GenBank:WP_162999306.1;Name=WP_162999306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020067818.1;locus_tag=LDO45_RS28695;product=hypothetical protein;protein_id=WP_162999306.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 18452 18850 . + . ID=gene-LDO45_RS28700;Name=LDO45_RS28700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28700;old_locus_tag=BDI4_690019 NZ_CAJZAS010000226.1 Protein Homology CDS 18452 18850 . + 0 ID=cds-WP_223964909.1;Parent=gene-LDO45_RS28700;Dbxref=GenBank:WP_223964909.1;Name=WP_223964909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757045.1;locus_tag=LDO45_RS28700;product=cupin domain-containing protein;protein_id=WP_223964909.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 18903 19778 . - . ID=gene-LDO45_RS28705;Name=LDO45_RS28705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28705;old_locus_tag=BDI4_690020 NZ_CAJZAS010000226.1 Protein Homology CDS 18903 19778 . - 0 ID=cds-WP_223964910.1;Parent=gene-LDO45_RS28705;Dbxref=GenBank:WP_223964910.1;Name=WP_223964910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372377.1;locus_tag=LDO45_RS28705;product=aldo/keto reductase family oxidoreductase;protein_id=WP_223964910.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 19879 20808 . + . ID=gene-LDO45_RS28710;Name=LDO45_RS28710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28710;old_locus_tag=BDI4_690021 NZ_CAJZAS010000226.1 Protein Homology CDS 19879 20808 . + 0 ID=cds-WP_223964911.1;Parent=gene-LDO45_RS28710;Dbxref=GenBank:WP_223964911.1;Name=WP_223964911.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213653.1;locus_tag=LDO45_RS28710;product=LysR family transcriptional regulator;protein_id=WP_223964911.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 20920 21876 . + . ID=gene-LDO45_RS28715;Name=LDO45_RS28715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28715;old_locus_tag=BDI4_690022 NZ_CAJZAS010000226.1 Protein Homology CDS 20920 21876 . + 0 ID=cds-WP_223964912.1;Parent=gene-LDO45_RS28715;Dbxref=GenBank:WP_223964912.1;Name=WP_223964912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012436758.1;locus_tag=LDO45_RS28715;product=mannuronate-specific alginate lyase;protein_id=WP_223964912.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 21904 23103 . - . ID=gene-LDO45_RS28720;Name=LDO45_RS28720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28720;old_locus_tag=BDI4_690023 NZ_CAJZAS010000226.1 Protein Homology CDS 21904 23103 . - 0 ID=cds-WP_059536111.1;Parent=gene-LDO45_RS28720;Dbxref=GenBank:WP_059536111.1;Name=WP_059536111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757042.1;locus_tag=LDO45_RS28720;product=sugar ABC transporter permease;protein_id=WP_059536111.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 23100 24659 . - . ID=gene-LDO45_RS28725;Name=xylG;gbkey=Gene;gene=xylG;gene_biotype=protein_coding;locus_tag=LDO45_RS28725;old_locus_tag=BDI4_690024 NZ_CAJZAS010000226.1 Protein Homology CDS 23100 24659 . - 0 ID=cds-WP_223964913.1;Parent=gene-LDO45_RS28725;Dbxref=GenBank:WP_223964913.1;Name=WP_223964913.1;Ontology_term=GO:0015753,GO:0005524,GO:0015614,GO:0016020;gbkey=CDS;gene=xylG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-xylose transporter activity|0015614||IEA;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335463.1;locus_tag=LDO45_RS28725;product=D-xylose ABC transporter ATP-binding protein;protein_id=WP_223964913.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 24733 25761 . - . ID=gene-LDO45_RS28730;Name=xylF;gbkey=Gene;gene=xylF;gene_biotype=protein_coding;locus_tag=LDO45_RS28730;old_locus_tag=BDI4_690025 NZ_CAJZAS010000226.1 Protein Homology CDS 24733 25761 . - 0 ID=cds-WP_059536104.1;Parent=gene-LDO45_RS28730;Dbxref=GenBank:WP_059536104.1;Name=WP_059536104.1;Ontology_term=GO:0015753,GO:0015614,GO:0033222,GO:0055052;gbkey=CDS;gene=xylF;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type D-xylose transporter activity|0015614||IEA,xylose binding|0033222||IEA;go_process=D-xylose transmembrane transport|0015753||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011490741.1;locus_tag=LDO45_RS28730;product=D-xylose ABC transporter substrate-binding protein;protein_id=WP_059536104.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 25870 27348 . - . ID=gene-LDO45_RS28735;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=LDO45_RS28735;old_locus_tag=BDI4_690026 NZ_CAJZAS010000226.1 Protein Homology CDS 25870 27348 . - 0 ID=cds-WP_223964914.1;Parent=gene-LDO45_RS28735;Dbxref=GenBank:WP_223964914.1;Name=WP_223964914.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397034.1;locus_tag=LDO45_RS28735;product=xylulokinase;protein_id=WP_223964914.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 27353 28675 . - . ID=gene-LDO45_RS28740;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=LDO45_RS28740;old_locus_tag=BDI4_690027 NZ_CAJZAS010000226.1 Protein Homology CDS 27353 28675 . - 0 ID=cds-WP_223964915.1;Parent=gene-LDO45_RS28740;Dbxref=GenBank:WP_223964915.1;Name=WP_223964915.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880506.1;locus_tag=LDO45_RS28740;product=xylose isomerase;protein_id=WP_223964915.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 28939 30132 . + . ID=gene-LDO45_RS28745;Name=LDO45_RS28745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28745;old_locus_tag=BDI4_690028 NZ_CAJZAS010000226.1 Protein Homology CDS 28939 30132 . + 0 ID=cds-WP_175910404.1;Parent=gene-LDO45_RS28745;Dbxref=GenBank:WP_175910404.1;Name=WP_175910404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006403516.1;locus_tag=LDO45_RS28745;product=DNA-binding transcriptional regulator;protein_id=WP_175910404.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 30160 31248 . + . ID=gene-LDO45_RS28750;Name=LDO45_RS28750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28750;old_locus_tag=BDI4_690029 NZ_CAJZAS010000226.1 Protein Homology CDS 30160 31248 . + 0 ID=cds-WP_223964916.1;Parent=gene-LDO45_RS28750;Dbxref=GenBank:WP_223964916.1;Name=WP_223964916.1;Ontology_term=GO:0005975,GO:0016857,GO:0030246;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA,carbohydrate binding|0030246||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726161.1;locus_tag=LDO45_RS28750;product=aldose epimerase family protein;protein_id=WP_223964916.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 31491 32675 . - . ID=gene-LDO45_RS28755;Name=LDO45_RS28755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28755;old_locus_tag=BDI4_690030 NZ_CAJZAS010000226.1 Protein Homology CDS 31491 32675 . - 0 ID=cds-WP_223964917.1;Parent=gene-LDO45_RS28755;Dbxref=GenBank:WP_223964917.1;Name=WP_223964917.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411059.1;locus_tag=LDO45_RS28755;product=porin;protein_id=WP_223964917.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 32731 33525 . - . ID=gene-LDO45_RS28760;Name=LDO45_RS28760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28760;old_locus_tag=BDI4_690031 NZ_CAJZAS010000226.1 Protein Homology CDS 32731 33525 . - 0 ID=cds-WP_059536085.1;Parent=gene-LDO45_RS28760;Dbxref=GenBank:WP_059536085.1;Name=WP_059536085.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411053.1;locus_tag=LDO45_RS28760;product=ABC transporter substrate-binding protein;protein_id=WP_059536085.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 33579 34748 . - . ID=gene-LDO45_RS28765;Name=LDO45_RS28765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28765;old_locus_tag=BDI4_690032 NZ_CAJZAS010000226.1 Protein Homology CDS 33579 34748 . - 0 ID=cds-WP_223964918.1;Parent=gene-LDO45_RS28765;Dbxref=GenBank:WP_223964918.1;Name=WP_223964918.1;Ontology_term=GO:0016787,GO:0016810;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411065.1;locus_tag=LDO45_RS28765;product=M20 aminoacylase family protein;protein_id=WP_223964918.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 34736 34888 . + . ID=gene-LDO45_RS28770;Name=LDO45_RS28770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28770 NZ_CAJZAS010000226.1 GeneMarkS-2+ CDS 34736 34888 . + 0 ID=cds-WP_223964919.1;Parent=gene-LDO45_RS28770;Dbxref=GenBank:WP_223964919.1;Name=WP_223964919.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS28770;product=hypothetical protein;protein_id=WP_223964919.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 34885 35847 . + . ID=gene-LDO45_RS28775;Name=LDO45_RS28775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28775;old_locus_tag=BDI4_690033 NZ_CAJZAS010000226.1 Protein Homology CDS 34885 35847 . + 0 ID=cds-WP_223964920.1;Parent=gene-LDO45_RS28775;Dbxref=GenBank:WP_223964920.1;Name=WP_223964920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494638.1;locus_tag=LDO45_RS28775;product=LysR substrate-binding domain-containing protein;protein_id=WP_223964920.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 35960 36235 . + . ID=gene-LDO45_RS28780;Name=frmR;gbkey=Gene;gene=frmR;gene_biotype=protein_coding;locus_tag=LDO45_RS28780;old_locus_tag=BDI4_690034 NZ_CAJZAS010000226.1 Protein Homology CDS 35960 36235 . + 0 ID=cds-WP_006753040.1;Parent=gene-LDO45_RS28780;Dbxref=GenBank:WP_006753040.1;Name=WP_006753040.1;gbkey=CDS;gene=frmR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384071.1;locus_tag=LDO45_RS28780;product=formaldehyde-responsive transcriptional repressor FrmR;protein_id=WP_006753040.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 36294 37403 . + . ID=gene-LDO45_RS28785;Name=LDO45_RS28785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28785;old_locus_tag=BDI4_690035 NZ_CAJZAS010000226.1 Protein Homology CDS 36294 37403 . + 0 ID=cds-WP_223964921.1;Parent=gene-LDO45_RS28785;Dbxref=GenBank:WP_223964921.1;Name=WP_223964921.1;Ontology_term=GO:0004024,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity%2C zinc-dependent|0004024||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753041.1;locus_tag=LDO45_RS28785;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_223964921.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 37521 38504 . - . ID=gene-LDO45_RS28790;Name=LDO45_RS28790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28790;old_locus_tag=BDI4_690036 NZ_CAJZAS010000226.1 Protein Homology CDS 37521 38504 . - 0 ID=cds-WP_223964922.1;Parent=gene-LDO45_RS28790;Dbxref=GenBank:WP_223964922.1;Name=WP_223964922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372347.1;locus_tag=LDO45_RS28790;product=hypothetical protein;protein_id=WP_223964922.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 38501 39019 . - . ID=gene-LDO45_RS28795;Name=LDO45_RS28795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28795;old_locus_tag=BDI4_690037 NZ_CAJZAS010000226.1 Protein Homology CDS 38501 39019 . - 0 ID=cds-WP_059690487.1;Parent=gene-LDO45_RS28795;Dbxref=GenBank:WP_059690487.1;Name=WP_059690487.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757028.1;locus_tag=LDO45_RS28795;product=(2Fe-2S)-binding protein;protein_id=WP_059690487.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 39016 41664 . - . ID=gene-LDO45_RS28800;Name=LDO45_RS28800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28800;old_locus_tag=BDI4_690038 NZ_CAJZAS010000226.1 Protein Homology CDS 39016 41664 . - 0 ID=cds-WP_223964923.1;Parent=gene-LDO45_RS28800;Dbxref=GenBank:WP_223964923.1;Name=WP_223964923.1;Ontology_term=GO:0043546;gbkey=CDS;go_function=molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757027.1;locus_tag=LDO45_RS28800;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;protein_id=WP_223964923.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 42585 43559 . - . ID=gene-LDO45_RS28805;Name=LDO45_RS28805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28805;old_locus_tag=BDI4_690041 NZ_CAJZAS010000226.1 Protein Homology CDS 42585 43559 . - 0 ID=cds-WP_223964924.1;Parent=gene-LDO45_RS28805;Dbxref=GenBank:WP_223964924.1;Name=WP_223964924.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486292.1;locus_tag=LDO45_RS28805;product=type II secretion system F family protein;protein_id=WP_223964924.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 43598 44575 . - . ID=gene-LDO45_RS28810;Name=LDO45_RS28810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28810;old_locus_tag=BDI4_690042 NZ_CAJZAS010000226.1 Protein Homology CDS 43598 44575 . - 0 ID=cds-WP_223964925.1;Parent=gene-LDO45_RS28810;Dbxref=GenBank:WP_223964925.1;Name=WP_223964925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004537325.1;locus_tag=LDO45_RS28810;product=type II secretion system F family protein;protein_id=WP_223964925.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 44609 45976 . - . ID=gene-LDO45_RS28815;Name=LDO45_RS28815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28815;old_locus_tag=BDI4_690043 NZ_CAJZAS010000226.1 Protein Homology CDS 44609 45976 . - 0 ID=cds-WP_059536051.1;Parent=gene-LDO45_RS28815;Dbxref=GenBank:WP_059536051.1;Name=WP_059536051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661171.1;locus_tag=LDO45_RS28815;product=CpaF family protein;protein_id=WP_059536051.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 45996 47204 . - . ID=gene-LDO45_RS28820;Name=LDO45_RS28820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28820;old_locus_tag=BDI4_690044 NZ_CAJZAS010000226.1 Protein Homology CDS 45996 47204 . - 0 ID=cds-WP_223964926.1;Parent=gene-LDO45_RS28820;Dbxref=GenBank:WP_223964926.1;Name=WP_223964926.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009908183.1;locus_tag=LDO45_RS28820;product=AAA family ATPase;protein_id=WP_223964926.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 47227 47670 . - . ID=gene-LDO45_RS28825;Name=LDO45_RS28825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28825;old_locus_tag=BDI4_690045 NZ_CAJZAS010000226.1 Protein Homology CDS 47227 47670 . - 0 ID=cds-WP_059536043.1;Parent=gene-LDO45_RS28825;Dbxref=GenBank:WP_059536043.1;Name=WP_059536043.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004552238.1;locus_tag=LDO45_RS28825;product=TadE/TadG family type IV pilus assembly protein;protein_id=WP_059536043.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 47667 48200 . - . ID=gene-LDO45_RS28830;Name=LDO45_RS28830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28830;old_locus_tag=BDI4_690046 NZ_CAJZAS010000226.1 Protein Homology CDS 47667 48200 . - 0 ID=cds-WP_059690483.1;Parent=gene-LDO45_RS28830;Dbxref=GenBank:WP_059690483.1;Name=WP_059690483.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880526.1;locus_tag=LDO45_RS28830;product=TadE/TadG family type IV pilus assembly protein;protein_id=WP_059690483.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 48214 49485 . - . ID=gene-LDO45_RS28835;Name=LDO45_RS28835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28835;old_locus_tag=BDI4_690047 NZ_CAJZAS010000226.1 Protein Homology CDS 48214 49485 . - 0 ID=cds-WP_223964927.1;Parent=gene-LDO45_RS28835;Dbxref=GenBank:WP_223964927.1;Name=WP_223964927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372339.1;locus_tag=LDO45_RS28835;product=pilus assembly protein TadG-related protein;protein_id=WP_223964927.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 49511 49810 . - . ID=gene-LDO45_RS28840;Name=LDO45_RS28840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28840;old_locus_tag=BDI4_690048 NZ_CAJZAS010000226.1 Protein Homology CDS 49511 49810 . - 0 ID=cds-WP_059594593.1;Parent=gene-LDO45_RS28840;Dbxref=GenBank:WP_059594593.1;Name=WP_059594593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090194.1;locus_tag=LDO45_RS28840;product=hypothetical protein;protein_id=WP_059594593.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 49831 51777 . - . ID=gene-LDO45_RS28845;Name=LDO45_RS28845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28845;old_locus_tag=BDI4_690049 NZ_CAJZAS010000226.1 Protein Homology CDS 49831 51777 . - 0 ID=cds-WP_223964928.1;Parent=gene-LDO45_RS28845;Dbxref=GenBank:WP_223964928.1;Name=WP_223964928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549054.1;locus_tag=LDO45_RS28845;product=type II and III secretion system protein family protein;protein_id=WP_223964928.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 51893 52738 . - . ID=gene-LDO45_RS28850;Name=cpaB;gbkey=Gene;gene=cpaB;gene_biotype=protein_coding;locus_tag=LDO45_RS28850;old_locus_tag=BDI4_690050 NZ_CAJZAS010000226.1 Protein Homology CDS 51893 52738 . - 0 ID=cds-WP_059536027.1;Parent=gene-LDO45_RS28850;Dbxref=GenBank:WP_059536027.1;Name=WP_059536027.1;gbkey=CDS;gene=cpaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603420.1;locus_tag=LDO45_RS28850;product=Flp pilus assembly protein CpaB;protein_id=WP_059536027.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 52774 54174 . - . ID=gene-LDO45_RS28855;Name=LDO45_RS28855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28855;old_locus_tag=BDI4_690051 NZ_CAJZAS010000226.1 Protein Homology CDS 52774 54174 . - 0 ID=cds-WP_059700967.1;Parent=gene-LDO45_RS28855;Dbxref=GenBank:WP_059700967.1;Name=WP_059700967.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498089.1;locus_tag=LDO45_RS28855;product=ATP-binding protein;protein_id=WP_059700967.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 54207 54746 . - . ID=gene-LDO45_RS28860;Name=LDO45_RS28860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28860;old_locus_tag=BDI4_690052 NZ_CAJZAS010000226.1 Protein Homology CDS 54207 54746 . - 0 ID=cds-WP_059700968.1;Parent=gene-LDO45_RS28860;Dbxref=GenBank:WP_059700968.1;Name=WP_059700968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372334.1;locus_tag=LDO45_RS28860;product=prepilin peptidase;protein_id=WP_059700968.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 54778 54984 . - . ID=gene-LDO45_RS28865;Name=LDO45_RS28865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28865;old_locus_tag=BDI4_690053 NZ_CAJZAS010000226.1 Protein Homology CDS 54778 54984 . - 0 ID=cds-WP_059536016.1;Parent=gene-LDO45_RS28865;Dbxref=GenBank:WP_059536016.1;Name=WP_059536016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880533.1;locus_tag=LDO45_RS28865;product=Flp family type IVb pilin;protein_id=WP_059536016.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 55152 55334 . - . ID=gene-LDO45_RS28870;Name=LDO45_RS28870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28870;old_locus_tag=BDI4_690054 NZ_CAJZAS010000226.1 Protein Homology CDS 55152 55334 . - 0 ID=cds-WP_059451855.1;Parent=gene-LDO45_RS28870;Dbxref=GenBank:WP_059451855.1;Name=WP_059451855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372332.1;locus_tag=LDO45_RS28870;product=Flp family type IVb pilin;protein_id=WP_059451855.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 55589 56122 . + . ID=gene-LDO45_RS28875;Name=LDO45_RS28875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28875 NZ_CAJZAS010000226.1 GeneMarkS-2+ CDS 55589 56122 . + 0 ID=cds-WP_223964929.1;Parent=gene-LDO45_RS28875;Dbxref=GenBank:WP_223964929.1;Name=WP_223964929.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS28875;product=hypothetical protein;protein_id=WP_223964929.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 56373 57611 . + . ID=gene-LDO45_RS28880;Name=LDO45_RS28880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28880;old_locus_tag=BDI4_690055 NZ_CAJZAS010000226.1 Protein Homology CDS 56373 57611 . + 0 ID=cds-WP_223964935.1;Parent=gene-LDO45_RS28880;Dbxref=GenBank:WP_223964935.1;Name=WP_223964935.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753344.1;locus_tag=LDO45_RS28880;product=glycosyltransferase family 87 protein;protein_id=WP_223964935.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 57608 58987 . + . ID=gene-LDO45_RS28885;Name=LDO45_RS28885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28885;old_locus_tag=BDI4_690056 NZ_CAJZAS010000226.1 Protein Homology CDS 57608 58987 . + 0 ID=cds-WP_223964930.1;Parent=gene-LDO45_RS28885;Dbxref=GenBank:WP_223964930.1;Name=WP_223964930.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661158.1;locus_tag=LDO45_RS28885;product=glycosyltransferase family 87 protein;protein_id=WP_223964930.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 59016 60059 . + . ID=gene-LDO45_RS28890;Name=LDO45_RS28890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28890;old_locus_tag=BDI4_690057 NZ_CAJZAS010000226.1 Protein Homology CDS 59016 60059 . + 0 ID=cds-WP_223964931.1;Parent=gene-LDO45_RS28890;Dbxref=GenBank:WP_223964931.1;Name=WP_223964931.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006498084.1;locus_tag=LDO45_RS28890;product=glycosyltransferase family 2 protein;protein_id=WP_223964931.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 60075 60458 . + . ID=gene-LDO45_RS28895;Name=LDO45_RS28895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28895;old_locus_tag=BDI4_690058 NZ_CAJZAS010000226.1 Protein Homology CDS 60075 60458 . + 0 ID=cds-WP_059700972.1;Parent=gene-LDO45_RS28895;Dbxref=GenBank:WP_059700972.1;Name=WP_059700972.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011661156.1;locus_tag=LDO45_RS28895;product=GtrA family protein;protein_id=WP_059700972.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 60736 61815 . + . ID=gene-LDO45_RS28900;Name=LDO45_RS28900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28900;old_locus_tag=BDI4_690059 NZ_CAJZAS010000226.1 Protein Homology CDS 60736 61815 . + 0 ID=cds-WP_059700973.1;Parent=gene-LDO45_RS28900;Dbxref=GenBank:WP_059700973.1;Name=WP_059700973.1;Ontology_term=GO:0016787,GO:0005576;gbkey=CDS;go_component=extracellular region|0005576||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485585.1;locus_tag=LDO45_RS28900;product=PHB depolymerase family esterase;protein_id=WP_059700973.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 61834 63606 . - . ID=gene-LDO45_RS28905;Name=LDO45_RS28905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28905;old_locus_tag=BDI4_690060 NZ_CAJZAS010000226.1 Protein Homology CDS 61834 63606 . - 0 ID=cds-WP_223964932.1;Parent=gene-LDO45_RS28905;Dbxref=GenBank:WP_223964932.1;Name=WP_223964932.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011880541.1;locus_tag=LDO45_RS28905;product=histidine kinase;protein_id=WP_223964932.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 63689 65095 . - . ID=gene-LDO45_RS28910;Name=LDO45_RS28910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28910;old_locus_tag=BDI4_690061 NZ_CAJZAS010000226.1 Protein Homology CDS 63689 65095 . - 0 ID=cds-WP_223964933.1;Parent=gene-LDO45_RS28910;Dbxref=GenBank:WP_223964933.1;Name=WP_223964933.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549127.1;locus_tag=LDO45_RS28910;product=HD domain-containing phosphohydrolase;protein_id=WP_223964933.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 65094 65246 . + . ID=gene-LDO45_RS28915;Name=LDO45_RS28915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28915 NZ_CAJZAS010000226.1 GeneMarkS-2+ CDS 65094 65246 . + 0 ID=cds-WP_156441474.1;Parent=gene-LDO45_RS28915;Dbxref=GenBank:WP_156441474.1;Name=WP_156441474.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS28915;product=hypothetical protein;protein_id=WP_156441474.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 65325 65618 . + . ID=gene-LDO45_RS28920;Name=LDO45_RS28920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28920;old_locus_tag=BDI4_690062 NZ_CAJZAS010000226.1 Protein Homology CDS 65325 65618 . + 0 ID=cds-WP_059690554.1;Parent=gene-LDO45_RS28920;Dbxref=GenBank:WP_059690554.1;Name=WP_059690554.1;Ontology_term=GO:0004497;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726186.1;locus_tag=LDO45_RS28920;product=antibiotic biosynthesis monooxygenase;protein_id=WP_059690554.1;transl_table=11 NZ_CAJZAS010000226.1 RefSeq gene 65729 66384 . + . ID=gene-LDO45_RS28925;Name=LDO45_RS28925;end_range=66384,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28925;partial=true NZ_CAJZAS010000226.1 Protein Homology CDS 65729 66384 . + 0 ID=cds-WP_223964934.1;Parent=gene-LDO45_RS28925;Dbxref=GenBank:WP_223964934.1;Name=WP_223964934.1;end_range=66384,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372319.1;locus_tag=LDO45_RS28925;partial=true;product=transporter substrate-binding domain-containing protein;protein_id=WP_223964934.1;transl_table=11 ##sequence-region NZ_CAJZAS010000227.1 1 64183 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000227.1 RefSeq region 1 64183 . + . ID=NZ_CAJZAS010000227.1:1..64183;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_7 NZ_CAJZAS010000227.1 RefSeq gene 16 939 . + . ID=gene-LDO45_RS28930;Name=LDO45_RS28930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28930;old_locus_tag=BDI4_70001 NZ_CAJZAS010000227.1 Protein Homology CDS 16 939 . + 0 ID=cds-WP_223964984.1;Parent=gene-LDO45_RS28930;Dbxref=GenBank:WP_223964984.1;Name=WP_223964984.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660945.1;locus_tag=LDO45_RS28930;product=ABC transporter permease subunit;protein_id=WP_223964984.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 936 1868 . + . ID=gene-LDO45_RS28935;Name=LDO45_RS28935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28935;old_locus_tag=BDI4_70002 NZ_CAJZAS010000227.1 Protein Homology CDS 936 1868 . + 0 ID=cds-WP_223964936.1;Parent=gene-LDO45_RS28935;Dbxref=GenBank:WP_223964936.1;Name=WP_223964936.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660946.1;locus_tag=LDO45_RS28935;product=ABC transporter permease subunit;protein_id=WP_223964936.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 1890 3455 . + . ID=gene-LDO45_RS28940;Name=LDO45_RS28940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28940;old_locus_tag=BDI4_70003 NZ_CAJZAS010000227.1 Protein Homology CDS 1890 3455 . + 0 ID=cds-WP_223964937.1;Parent=gene-LDO45_RS28940;Dbxref=GenBank:WP_223964937.1;Name=WP_223964937.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411185.1;locus_tag=LDO45_RS28940;product=DUF3138 family protein;protein_id=WP_223964937.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 3482 4774 . + . ID=gene-LDO45_RS28945;Name=LDO45_RS28945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28945;old_locus_tag=BDI4_70004 NZ_CAJZAS010000227.1 Protein Homology CDS 3482 4774 . + 0 ID=cds-WP_223964938.1;Parent=gene-LDO45_RS28945;Dbxref=GenBank:WP_223964938.1;Name=WP_223964938.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525489.1;locus_tag=LDO45_RS28945;product=FAD-binding oxidoreductase;protein_id=WP_223964938.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 4842 5222 . + . ID=gene-LDO45_RS28950;Name=LDO45_RS28950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28950;old_locus_tag=BDI4_70005 NZ_CAJZAS010000227.1 Protein Homology CDS 4842 5222 . + 0 ID=cds-WP_223964939.1;Parent=gene-LDO45_RS28950;Dbxref=GenBank:WP_223964939.1;Name=WP_223964939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660949.1;locus_tag=LDO45_RS28950;product=cupin domain-containing protein;protein_id=WP_223964939.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 5269 6684 . + . ID=gene-LDO45_RS28955;Name=LDO45_RS28955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28955;old_locus_tag=BDI4_70006 NZ_CAJZAS010000227.1 Protein Homology CDS 5269 6684 . + 0 ID=cds-WP_223964940.1;Parent=gene-LDO45_RS28955;Dbxref=GenBank:WP_223964940.1;Name=WP_223964940.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350362.1;locus_tag=LDO45_RS28955;product=amidase family protein;protein_id=WP_223964940.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 6714 8204 . + . ID=gene-LDO45_RS28960;Name=LDO45_RS28960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28960;old_locus_tag=BDI4_70007 NZ_CAJZAS010000227.1 Protein Homology CDS 6714 8204 . + 0 ID=cds-WP_223964941.1;Parent=gene-LDO45_RS28960;Dbxref=GenBank:WP_223964941.1;Name=WP_223964941.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660951.1;locus_tag=LDO45_RS28960;product=aldehyde dehydrogenase;protein_id=WP_223964941.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 8272 10125 . - . ID=gene-LDO45_RS28965;Name=LDO45_RS28965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28965;old_locus_tag=BDI4_70008 NZ_CAJZAS010000227.1 Protein Homology CDS 8272 10125 . - 0 ID=cds-WP_223964942.1;Parent=gene-LDO45_RS28965;Dbxref=GenBank:WP_223964942.1;Name=WP_223964942.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399227.1;locus_tag=LDO45_RS28965;product=ABC transporter ATP-binding protein;protein_id=WP_223964942.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 10434 10805 . + . ID=gene-LDO45_RS28970;Name=LDO45_RS28970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28970;old_locus_tag=BDI4_70009 NZ_CAJZAS010000227.1 Protein Homology CDS 10434 10805 . + 0 ID=cds-WP_059526036.1;Parent=gene-LDO45_RS28970;Dbxref=GenBank:WP_059526036.1;Name=WP_059526036.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337109.1;locus_tag=LDO45_RS28970;product=CidA/LrgA family protein;protein_id=WP_059526036.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 10802 11536 . + . ID=gene-LDO45_RS28975;Name=LDO45_RS28975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28975;old_locus_tag=BDI4_70010 NZ_CAJZAS010000227.1 Protein Homology CDS 10802 11536 . + 0 ID=cds-WP_223964943.1;Parent=gene-LDO45_RS28975;Dbxref=GenBank:WP_223964943.1;Name=WP_223964943.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372191.1;locus_tag=LDO45_RS28975;product=LrgB family protein;protein_id=WP_223964943.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 11780 12094 . + . ID=gene-LDO45_RS28980;Name=LDO45_RS28980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28980;old_locus_tag=BDI4_70011 NZ_CAJZAS010000227.1 Protein Homology CDS 11780 12094 . + 0 ID=cds-WP_223964944.1;Parent=gene-LDO45_RS28980;Dbxref=GenBank:WP_223964944.1;Name=WP_223964944.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490956.1;locus_tag=LDO45_RS28980;product=hypothetical protein;protein_id=WP_223964944.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 12215 12817 . - . ID=gene-LDO45_RS28985;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=LDO45_RS28985;old_locus_tag=BDI4_70012 NZ_CAJZAS010000227.1 Protein Homology CDS 12215 12817 . - 0 ID=cds-WP_059526008.1;Parent=gene-LDO45_RS28985;Dbxref=GenBank:WP_059526008.1;Name=WP_059526008.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350320.1;locus_tag=LDO45_RS28985;product=NAD(P)H:quinone oxidoreductase;protein_id=WP_059526008.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 12879 13604 . - . ID=gene-LDO45_RS28990;Name=LDO45_RS28990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28990;old_locus_tag=BDI4_70013 NZ_CAJZAS010000227.1 Protein Homology CDS 12879 13604 . - 0 ID=cds-WP_059526006.1;Parent=gene-LDO45_RS28990;Dbxref=GenBank:WP_059526006.1;Name=WP_059526006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004525454.1;locus_tag=LDO45_RS28990;product=pirin family protein;protein_id=WP_059526006.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 13732 14616 . + . ID=gene-LDO45_RS28995;Name=LDO45_RS28995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS28995;old_locus_tag=BDI4_70014 NZ_CAJZAS010000227.1 Protein Homology CDS 13732 14616 . + 0 ID=cds-WP_059820814.1;Parent=gene-LDO45_RS28995;Dbxref=GenBank:WP_059820814.1;Name=WP_059820814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399215.1;locus_tag=LDO45_RS28995;product=LysR family transcriptional regulator;protein_id=WP_059820814.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 15074 15253 . + . ID=gene-LDO45_RS29000;Name=LDO45_RS29000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29000 NZ_CAJZAS010000227.1 GeneMarkS-2+ CDS 15074 15253 . + 0 ID=cds-WP_223964945.1;Parent=gene-LDO45_RS29000;Dbxref=GenBank:WP_223964945.1;Name=WP_223964945.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS29000;product=hypothetical protein;protein_id=WP_223964945.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 15439 15804 . - . ID=gene-LDO45_RS29005;Name=LDO45_RS29005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29005;old_locus_tag=BDI4_70016 NZ_CAJZAS010000227.1 Protein Homology CDS 15439 15804 . - 0 ID=cds-WP_077176700.1;Parent=gene-LDO45_RS29005;Dbxref=GenBank:WP_077176700.1;Name=WP_077176700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015985055.1;locus_tag=LDO45_RS29005;product=Mor transcription activator family protein;protein_id=WP_077176700.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 15801 16241 . - . ID=gene-LDO45_RS29010;Name=LDO45_RS29010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29010;old_locus_tag=BDI4_70017 NZ_CAJZAS010000227.1 Protein Homology CDS 15801 16241 . - 0 ID=cds-WP_223964946.1;Parent=gene-LDO45_RS29010;Dbxref=GenBank:WP_223964946.1;Name=WP_223964946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015985046.1;locus_tag=LDO45_RS29010;product=gp16 family protein;protein_id=WP_223964946.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 16225 16566 . - . ID=gene-LDO45_RS29015;Name=LDO45_RS29015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29015;old_locus_tag=BDI4_70018 NZ_CAJZAS010000227.1 Protein Homology CDS 16225 16566 . - 0 ID=cds-WP_223964947.1;Parent=gene-LDO45_RS29015;Dbxref=GenBank:WP_223964947.1;Name=WP_223964947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493773.1;locus_tag=LDO45_RS29015;product=DUF2528 family protein;protein_id=WP_223964947.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 16660 16932 . - . ID=gene-LDO45_RS29020;Name=LDO45_RS29020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29020;old_locus_tag=BDI4_70019 NZ_CAJZAS010000227.1 Protein Homology CDS 16660 16932 . - 0 ID=cds-WP_223964948.1;Parent=gene-LDO45_RS29020;Dbxref=GenBank:WP_223964948.1;Name=WP_223964948.1;Ontology_term=GO:0030261,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485362.1;locus_tag=LDO45_RS29020;product=HU family DNA-binding protein;protein_id=WP_223964948.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 16996 17613 . - . ID=gene-LDO45_RS29025;Name=LDO45_RS29025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29025;old_locus_tag=BDI4_70020 NZ_CAJZAS010000227.1 Protein Homology CDS 16996 17613 . - 0 ID=cds-WP_006485364.1;Parent=gene-LDO45_RS29025;Dbxref=GenBank:WP_006485364.1;Name=WP_006485364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910737.1;locus_tag=LDO45_RS29025;product=DUF3164 family protein;protein_id=WP_006485364.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 17758 18012 . - . ID=gene-LDO45_RS29030;Name=LDO45_RS29030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29030;old_locus_tag=BDI4_70022 NZ_CAJZAS010000227.1 GeneMarkS-2+ CDS 17758 18012 . - 0 ID=cds-WP_085722586.1;Parent=gene-LDO45_RS29030;Dbxref=GenBank:WP_085722586.1;Name=WP_085722586.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS29030;product=host nuclease inhibitor protein;protein_id=WP_085722586.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 18009 18257 . - . ID=gene-LDO45_RS29035;Name=LDO45_RS29035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29035;old_locus_tag=BDI4_70023 NZ_CAJZAS010000227.1 GeneMarkS-2+ CDS 18009 18257 . - 0 ID=cds-WP_223964949.1;Parent=gene-LDO45_RS29035;Dbxref=GenBank:WP_223964949.1;Name=WP_223964949.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS29035;product=hypothetical protein;protein_id=WP_223964949.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 18254 18583 . - . ID=gene-LDO45_RS29040;Name=LDO45_RS29040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29040;old_locus_tag=BDI4_70024 NZ_CAJZAS010000227.1 Protein Homology CDS 18254 18583 . - 0 ID=cds-WP_085722588.1;Parent=gene-LDO45_RS29040;Dbxref=GenBank:WP_085722588.1;Name=WP_085722588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910739.1;locus_tag=LDO45_RS29040;product=hypothetical protein;protein_id=WP_085722588.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 18585 19799 . - . ID=gene-LDO45_RS29045;Name=LDO45_RS29045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29045;old_locus_tag=BDI4_70025 NZ_CAJZAS010000227.1 Protein Homology CDS 18585 19799 . - 0 ID=cds-WP_206601719.1;Parent=gene-LDO45_RS29045;Dbxref=GenBank:WP_206601719.1;Name=WP_206601719.1;Ontology_term=GO:0016887;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485392.1;locus_tag=LDO45_RS29045;product=AAA family ATPase;protein_id=WP_206601719.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 19796 21595 . - . ID=gene-LDO45_RS29050;Name=LDO45_RS29050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29050;old_locus_tag=BDI4_70026 NZ_CAJZAS010000227.1 Protein Homology CDS 19796 21595 . - 0 ID=cds-WP_223964950.1;Parent=gene-LDO45_RS29050;Dbxref=GenBank:WP_223964950.1;Name=WP_223964950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485354.1;locus_tag=LDO45_RS29050;product=DDE-type integrase/transposase/recombinase;protein_id=WP_223964950.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 21613 22566 . - . ID=gene-LDO45_RS29055;Name=LDO45_RS29055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29055;old_locus_tag=BDI4_70027 NZ_CAJZAS010000227.1 Protein Homology CDS 21613 22566 . - 0 ID=cds-WP_223964951.1;Parent=gene-LDO45_RS29055;Dbxref=GenBank:WP_223964951.1;Name=WP_223964951.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485380.1;locus_tag=LDO45_RS29055;product=hypothetical protein;protein_id=WP_223964951.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 22577 22789 . - . ID=gene-LDO45_RS29060;Name=LDO45_RS29060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29060 NZ_CAJZAS010000227.1 Protein Homology CDS 22577 22789 . - 0 ID=cds-WP_200524643.1;Parent=gene-LDO45_RS29060;Dbxref=GenBank:WP_200524643.1;Name=WP_200524643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493771.1;locus_tag=LDO45_RS29060;product=hypothetical protein;protein_id=WP_200524643.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 22800 23102 . - . ID=gene-LDO45_RS29065;Name=LDO45_RS29065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29065;old_locus_tag=BDI4_70029 NZ_CAJZAS010000227.1 Protein Homology CDS 22800 23102 . - 0 ID=cds-WP_006485394.1;Parent=gene-LDO45_RS29065;Dbxref=GenBank:WP_006485394.1;Name=WP_006485394.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485394.1;locus_tag=LDO45_RS29065;product=helix-turn-helix domain-containing protein;protein_id=WP_006485394.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 23099 23578 . - . ID=gene-LDO45_RS29070;Name=LDO45_RS29070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29070;old_locus_tag=BDI4_70030 NZ_CAJZAS010000227.1 Protein Homology CDS 23099 23578 . - 0 ID=cds-WP_012493770.1;Parent=gene-LDO45_RS29070;Dbxref=GenBank:WP_012493770.1;Name=WP_012493770.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493770.1;locus_tag=LDO45_RS29070;product=hypothetical protein;protein_id=WP_012493770.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 23699 23935 . + . ID=gene-LDO45_RS29075;Name=LDO45_RS29075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29075;old_locus_tag=BDI4_70031 NZ_CAJZAS010000227.1 Protein Homology CDS 23699 23935 . + 0 ID=cds-WP_223964952.1;Parent=gene-LDO45_RS29075;Dbxref=GenBank:WP_223964952.1;Name=WP_223964952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493768.1;locus_tag=LDO45_RS29075;product=hypothetical protein;protein_id=WP_223964952.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 23981 24163 . - . ID=gene-LDO45_RS29080;Name=LDO45_RS29080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29080;old_locus_tag=BDI4_70032 NZ_CAJZAS010000227.1 Protein Homology CDS 23981 24163 . - 0 ID=cds-WP_059598256.1;Parent=gene-LDO45_RS29080;Dbxref=GenBank:WP_059598256.1;Name=WP_059598256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910751.1;locus_tag=LDO45_RS29080;product=DNA-binding protein;protein_id=WP_059598256.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 24288 24713 . + . ID=gene-LDO45_RS29085;Name=LDO45_RS29085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29085;old_locus_tag=BDI4_70033 NZ_CAJZAS010000227.1 Protein Homology CDS 24288 24713 . + 0 ID=cds-WP_223964953.1;Parent=gene-LDO45_RS29085;Dbxref=GenBank:WP_223964953.1;Name=WP_223964953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015985042.1;locus_tag=LDO45_RS29085;product=XRE family transcriptional regulator;protein_id=WP_223964953.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 24710 25495 . + . ID=gene-LDO45_RS29090;Name=LDO45_RS29090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29090;old_locus_tag=BDI4_70034 NZ_CAJZAS010000227.1 Protein Homology CDS 24710 25495 . + 0 ID=cds-WP_223964954.1;Parent=gene-LDO45_RS29090;Dbxref=GenBank:WP_223964954.1;Name=WP_223964954.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485360.1;locus_tag=LDO45_RS29090;product=hypothetical protein;protein_id=WP_223964954.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 25568 25753 . + . ID=gene-LDO45_RS29095;Name=LDO45_RS29095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29095;old_locus_tag=BDI4_70035 NZ_CAJZAS010000227.1 Protein Homology CDS 25568 25753 . + 0 ID=cds-WP_223964955.1;Parent=gene-LDO45_RS29095;Dbxref=GenBank:WP_223964955.1;Name=WP_223964955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910756.1;locus_tag=LDO45_RS29095;product=hypothetical protein;protein_id=WP_223964955.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 25734 26270 . + . ID=gene-LDO45_RS29100;Name=LDO45_RS29100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29100;old_locus_tag=BDI4_70036 NZ_CAJZAS010000227.1 Protein Homology CDS 25734 26270 . + 0 ID=cds-WP_085722594.1;Parent=gene-LDO45_RS29100;Dbxref=GenBank:WP_085722594.1;Name=WP_085722594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485413.1;locus_tag=LDO45_RS29100;product=hypothetical protein;protein_id=WP_085722594.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 26334 26558 . + . ID=gene-LDO45_RS29105;Name=LDO45_RS29105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29105;old_locus_tag=BDI4_70037 NZ_CAJZAS010000227.1 Protein Homology CDS 26334 26558 . + 0 ID=cds-WP_223964956.1;Parent=gene-LDO45_RS29105;Dbxref=GenBank:WP_223964956.1;Name=WP_223964956.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485403.1;locus_tag=LDO45_RS29105;product=hypothetical protein;protein_id=WP_223964956.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 26625 26972 . + . ID=gene-LDO45_RS29110;Name=LDO45_RS29110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29110;old_locus_tag=BDI4_70038 NZ_CAJZAS010000227.1 Protein Homology CDS 26625 26972 . + 0 ID=cds-WP_060340152.1;Parent=gene-LDO45_RS29110;Dbxref=GenBank:WP_060340152.1;Name=WP_060340152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485400.1;locus_tag=LDO45_RS29110;product=putative holin;protein_id=WP_060340152.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 26975 27586 . + . ID=gene-LDO45_RS29115;Name=LDO45_RS29115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29115;old_locus_tag=BDI4_70039 NZ_CAJZAS010000227.1 Protein Homology CDS 26975 27586 . + 0 ID=cds-WP_085722596.1;Parent=gene-LDO45_RS29115;Dbxref=GenBank:WP_085722596.1;Name=WP_085722596.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015985075.1;locus_tag=LDO45_RS29115;product=transglycosylase SLT domain-containing protein;protein_id=WP_085722596.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 27583 28182 . + . ID=gene-LDO45_RS29120;Name=LDO45_RS29120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29120;old_locus_tag=BDI4_70040 NZ_CAJZAS010000227.1 Protein Homology CDS 27583 28182 . + 0 ID=cds-WP_223964985.1;Parent=gene-LDO45_RS29120;Dbxref=GenBank:WP_223964985.1;Name=WP_223964985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485363.1;locus_tag=LDO45_RS29120;product=hypothetical protein;protein_id=WP_223964985.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 28179 28517 . + . ID=gene-LDO45_RS29125;Name=LDO45_RS29125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29125;old_locus_tag=BDI4_70041 NZ_CAJZAS010000227.1 Protein Homology CDS 28179 28517 . + 0 ID=cds-WP_006485409.1;Parent=gene-LDO45_RS29125;Dbxref=GenBank:WP_006485409.1;Name=WP_006485409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485409.1;locus_tag=LDO45_RS29125;product=hypothetical protein;protein_id=WP_006485409.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 28514 28846 . + . ID=gene-LDO45_RS29130;Name=LDO45_RS29130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29130;old_locus_tag=BDI4_70042 NZ_CAJZAS010000227.1 Protein Homology CDS 28514 28846 . + 0 ID=cds-WP_006485389.1;Parent=gene-LDO45_RS29130;Dbxref=GenBank:WP_006485389.1;Name=WP_006485389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485389.1;locus_tag=LDO45_RS29130;product=hypothetical protein;protein_id=WP_006485389.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 28848 29393 . + . ID=gene-LDO45_RS29135;Name=LDO45_RS29135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29135;old_locus_tag=BDI4_70043 NZ_CAJZAS010000227.1 Protein Homology CDS 28848 29393 . + 0 ID=cds-WP_006485391.1;Parent=gene-LDO45_RS29135;Dbxref=GenBank:WP_006485391.1;Name=WP_006485391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485391.1;locus_tag=LDO45_RS29135;product=DUF3486 family protein;protein_id=WP_006485391.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 29390 30892 . + . ID=gene-LDO45_RS29140;Name=LDO45_RS29140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29140;old_locus_tag=BDI4_70044 NZ_CAJZAS010000227.1 Protein Homology CDS 29390 30892 . + 0 ID=cds-WP_223964957.1;Parent=gene-LDO45_RS29140;Dbxref=GenBank:WP_223964957.1;Name=WP_223964957.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485377.1;locus_tag=LDO45_RS29140;product=terminase large subunit domain-containing protein;protein_id=WP_223964957.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 30889 32364 . + . ID=gene-LDO45_RS29145;Name=LDO45_RS29145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29145;old_locus_tag=BDI4_70045 NZ_CAJZAS010000227.1 Protein Homology CDS 30889 32364 . + 0 ID=cds-WP_223964958.1;Parent=gene-LDO45_RS29145;Dbxref=GenBank:WP_223964958.1;Name=WP_223964958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485375.1;locus_tag=LDO45_RS29145;product=DUF935 domain-containing protein;protein_id=WP_223964958.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 32357 33193 . + . ID=gene-LDO45_RS29150;Name=LDO45_RS29150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29150;old_locus_tag=BDI4_70046 NZ_CAJZAS010000227.1 Protein Homology CDS 32357 33193 . + 0 ID=cds-WP_223964959.1;Parent=gene-LDO45_RS29150;Dbxref=GenBank:WP_223964959.1;Name=WP_223964959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485383.1;locus_tag=LDO45_RS29150;product=phage minor head protein;protein_id=WP_223964959.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 33190 33717 . + . ID=gene-LDO45_RS29155;Name=LDO45_RS29155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29155;old_locus_tag=BDI4_70047 NZ_CAJZAS010000227.1 Protein Homology CDS 33190 33717 . + 0 ID=cds-WP_006485370.1;Parent=gene-LDO45_RS29155;Dbxref=GenBank:WP_006485370.1;Name=WP_006485370.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910771.1;locus_tag=LDO45_RS29155;product=phage virion morphogenesis protein;protein_id=WP_006485370.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 33932 35050 . + . ID=gene-LDO45_RS29160;Name=LDO45_RS29160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29160;old_locus_tag=BDI4_70048 NZ_CAJZAS010000227.1 Protein Homology CDS 33932 35050 . + 0 ID=cds-WP_085722602.1;Parent=gene-LDO45_RS29160;Dbxref=GenBank:WP_085722602.1;Name=WP_085722602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015985059.1;locus_tag=LDO45_RS29160;product=peptidase;protein_id=WP_085722602.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 35096 36019 . + . ID=gene-LDO45_RS29165;Name=LDO45_RS29165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29165;old_locus_tag=BDI4_70049 NZ_CAJZAS010000227.1 Protein Homology CDS 35096 36019 . + 0 ID=cds-WP_006485371.1;Parent=gene-LDO45_RS29165;Dbxref=GenBank:WP_006485371.1;Name=WP_006485371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015985049.1;locus_tag=LDO45_RS29165;product=hypothetical protein;protein_id=WP_006485371.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 36094 36426 . + . ID=gene-LDO45_RS29170;Name=LDO45_RS29170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29170;old_locus_tag=BDI4_70050 NZ_CAJZAS010000227.1 Protein Homology CDS 36094 36426 . + 0 ID=cds-WP_200062572.1;Parent=gene-LDO45_RS29170;Dbxref=GenBank:WP_200062572.1;Name=WP_200062572.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485381.1;locus_tag=LDO45_RS29170;product=DUF2190 family protein;protein_id=WP_200062572.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 36398 36880 . + . ID=gene-LDO45_RS29175;Name=LDO45_RS29175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29175;old_locus_tag=BDI4_70051 NZ_CAJZAS010000227.1 Protein Homology CDS 36398 36880 . + 0 ID=cds-WP_223964960.1;Parent=gene-LDO45_RS29175;Dbxref=GenBank:WP_223964960.1;Name=WP_223964960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910777.1;locus_tag=LDO45_RS29175;product=gp436 family protein;protein_id=WP_223964960.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 36880 37344 . + . ID=gene-LDO45_RS29180;Name=LDO45_RS29180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29180;old_locus_tag=BDI4_70052 NZ_CAJZAS010000227.1 Protein Homology CDS 36880 37344 . + 0 ID=cds-WP_223964961.1;Parent=gene-LDO45_RS29180;Dbxref=GenBank:WP_223964961.1;Name=WP_223964961.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910779.1;locus_tag=LDO45_RS29180;product=Gp37 family protein;protein_id=WP_223964961.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 37341 37586 . + . ID=gene-LDO45_RS29185;Name=LDO45_RS29185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29185;old_locus_tag=BDI4_70053 NZ_CAJZAS010000227.1 Protein Homology CDS 37341 37586 . + 0 ID=cds-WP_006485405.1;Parent=gene-LDO45_RS29185;Dbxref=GenBank:WP_006485405.1;Name=WP_006485405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910780.1;locus_tag=LDO45_RS29185;product=hypothetical protein;protein_id=WP_006485405.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 37590 39023 . + . ID=gene-LDO45_RS29190;Name=LDO45_RS29190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29190;old_locus_tag=BDI4_70054 NZ_CAJZAS010000227.1 Protein Homology CDS 37590 39023 . + 0 ID=cds-WP_223964962.1;Parent=gene-LDO45_RS29190;Dbxref=GenBank:WP_223964962.1;Name=WP_223964962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485369.1;locus_tag=LDO45_RS29190;product=phage tail sheath subtilisin-like domain-containing protein;protein_id=WP_223964962.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 39026 39550 . + . ID=gene-LDO45_RS29195;Name=LDO45_RS29195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29195;old_locus_tag=BDI4_70055 NZ_CAJZAS010000227.1 Protein Homology CDS 39026 39550 . + 0 ID=cds-WP_006485397.1;Parent=gene-LDO45_RS29195;Dbxref=GenBank:WP_006485397.1;Name=WP_006485397.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485397.1;locus_tag=LDO45_RS29195;product=phage major tail tube protein;protein_id=WP_006485397.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 39672 40001 . + . ID=gene-LDO45_RS29200;Name=LDO45_RS29200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29200;old_locus_tag=BDI4_70056 NZ_CAJZAS010000227.1 Protein Homology CDS 39672 40001 . + 0 ID=cds-WP_223964963.1;Parent=gene-LDO45_RS29200;Dbxref=GenBank:WP_223964963.1;Name=WP_223964963.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015985077.1;locus_tag=LDO45_RS29200;product=phage tail assembly protein;protein_id=WP_223964963.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 40006 40131 . + . ID=gene-LDO45_RS34325;Name=LDO45_RS34325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34325;old_locus_tag=BDI4_70057 NZ_CAJZAS010000227.1 GeneMarkS-2+ CDS 40006 40131 . + 0 ID=cds-WP_256870229.1;Parent=gene-LDO45_RS34325;Dbxref=GenBank:WP_256870229.1;Name=WP_256870229.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34325;product=hypothetical protein;protein_id=WP_256870229.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 40134 40376 . - . ID=gene-LDO45_RS29205;Name=LDO45_RS29205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29205;old_locus_tag=BDI4_70058 NZ_CAJZAS010000227.1 Protein Homology CDS 40134 40376 . - 0 ID=cds-WP_223964964.1;Parent=gene-LDO45_RS29205;Dbxref=GenBank:WP_223964964.1;Name=WP_223964964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910787.1;locus_tag=LDO45_RS29205;product=hypothetical protein;protein_id=WP_223964964.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 40406 43012 . + . ID=gene-LDO45_RS29210;Name=LDO45_RS29210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29210;old_locus_tag=BDI4_70059 NZ_CAJZAS010000227.1 Protein Homology CDS 40406 43012 . + 0 ID=cds-WP_223964965.1;Parent=gene-LDO45_RS29210;Dbxref=GenBank:WP_223964965.1;Name=WP_223964965.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485356.1;locus_tag=LDO45_RS29210;product=phage tail tape measure protein;protein_id=WP_223964965.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 43021 43911 . + . ID=gene-LDO45_RS29215;Name=LDO45_RS29215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29215;old_locus_tag=BDI4_70060 NZ_CAJZAS010000227.1 Protein Homology CDS 43021 43911 . + 0 ID=cds-WP_006485408.1;Parent=gene-LDO45_RS29215;Dbxref=GenBank:WP_006485408.1;Name=WP_006485408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485408.1;locus_tag=LDO45_RS29215;product=phage tail protein;protein_id=WP_006485408.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 43911 44120 . + . ID=gene-LDO45_RS29220;Name=LDO45_RS29220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29220;old_locus_tag=BDI4_70061 NZ_CAJZAS010000227.1 Protein Homology CDS 43911 44120 . + 0 ID=cds-WP_006485366.1;Parent=gene-LDO45_RS29220;Dbxref=GenBank:WP_006485366.1;Name=WP_006485366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485366.1;locus_tag=LDO45_RS29220;product=tail protein X;protein_id=WP_006485366.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 44108 45316 . + . ID=gene-LDO45_RS29225;Name=LDO45_RS29225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29225;old_locus_tag=BDI4_70062 NZ_CAJZAS010000227.1 Protein Homology CDS 44108 45316 . + 0 ID=cds-WP_223964966.1;Parent=gene-LDO45_RS29225;Dbxref=GenBank:WP_223964966.1;Name=WP_223964966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485372.1;locus_tag=LDO45_RS29225;product=phage late control D family protein;protein_id=WP_223964966.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 45313 45915 . + . ID=gene-LDO45_RS29230;Name=LDO45_RS29230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29230;old_locus_tag=BDI4_70063 NZ_CAJZAS010000227.1 Protein Homology CDS 45313 45915 . + 0 ID=cds-WP_223964967.1;Parent=gene-LDO45_RS29230;Dbxref=GenBank:WP_223964967.1;Name=WP_223964967.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910796.1;locus_tag=LDO45_RS29230;product=phage baseplate assembly protein V;protein_id=WP_223964967.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 45969 46322 . + . ID=gene-LDO45_RS29235;Name=LDO45_RS29235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29235;old_locus_tag=BDI4_70064 NZ_CAJZAS010000227.1 Protein Homology CDS 45969 46322 . + 0 ID=cds-WP_223964968.1;Parent=gene-LDO45_RS29235;Dbxref=GenBank:WP_223964968.1;Name=WP_223964968.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485365.1;locus_tag=LDO45_RS29235;product=GPW/gp25 family protein;protein_id=WP_223964968.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 46319 47470 . + . ID=gene-LDO45_RS29240;Name=LDO45_RS29240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29240;old_locus_tag=BDI4_70065 NZ_CAJZAS010000227.1 Protein Homology CDS 46319 47470 . + 0 ID=cds-WP_223964969.1;Parent=gene-LDO45_RS29240;Dbxref=GenBank:WP_223964969.1;Name=WP_223964969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910798.1;locus_tag=LDO45_RS29240;product=baseplate J/gp47 family protein;protein_id=WP_223964969.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 47463 48044 . + . ID=gene-LDO45_RS29245;Name=LDO45_RS29245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29245;old_locus_tag=BDI4_70066 NZ_CAJZAS010000227.1 Protein Homology CDS 47463 48044 . + 0 ID=cds-WP_223964970.1;Parent=gene-LDO45_RS29245;Dbxref=GenBank:WP_223964970.1;Name=WP_223964970.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493761.1;locus_tag=LDO45_RS29245;product=phage tail protein I;protein_id=WP_223964970.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 48044 49162 . + . ID=gene-LDO45_RS29250;Name=LDO45_RS29250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29250;old_locus_tag=BDI4_70067 NZ_CAJZAS010000227.1 GeneMarkS-2+ CDS 48044 49162 . + 0 ID=cds-WP_223964971.1;Parent=gene-LDO45_RS29250;Dbxref=GenBank:WP_223964971.1;Name=WP_223964971.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS29250;product=hypothetical protein;protein_id=WP_223964971.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 49352 50134 . + . ID=gene-LDO45_RS29255;Name=LDO45_RS29255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29255;old_locus_tag=BDI4_70068 NZ_CAJZAS010000227.1 Protein Homology CDS 49352 50134 . + 0 ID=cds-WP_223964972.1;Parent=gene-LDO45_RS29255;Dbxref=GenBank:WP_223964972.1;Name=WP_223964972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009905969.1;locus_tag=LDO45_RS29255;product=phage tail protein;protein_id=WP_223964972.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 50143 50373 . + . ID=gene-LDO45_RS29260;Name=LDO45_RS29260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29260;old_locus_tag=BDI4_70069 NZ_CAJZAS010000227.1 GeneMarkS-2+ CDS 50143 50373 . + 0 ID=cds-WP_223964973.1;Parent=gene-LDO45_RS29260;Dbxref=GenBank:WP_223964973.1;Name=WP_223964973.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS29260;product=hypothetical protein;protein_id=WP_223964973.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 50341 51336 . - . ID=gene-LDO45_RS29265;Name=LDO45_RS29265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29265;old_locus_tag=BDI4_70070 NZ_CAJZAS010000227.1 Protein Homology CDS 50341 51336 . - 0 ID=cds-WP_223964974.1;Parent=gene-LDO45_RS29265;Dbxref=GenBank:WP_223964974.1;Name=WP_223964974.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF013884.5;locus_tag=LDO45_RS29265;product=acyltransferase;protein_id=WP_223964974.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 52238 53023 . + . ID=gene-LDO45_RS29270;Name=LDO45_RS29270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29270;old_locus_tag=BDI4_70071 NZ_CAJZAS010000227.1 Protein Homology CDS 52238 53023 . + 0 ID=cds-WP_059693668.1;Parent=gene-LDO45_RS29270;Dbxref=GenBank:WP_059693668.1;Name=WP_059693668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545170.1;locus_tag=LDO45_RS29270;product=hypothetical protein;protein_id=WP_059693668.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 53127 53789 . + . ID=gene-LDO45_RS29275;Name=LDO45_RS29275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29275;old_locus_tag=BDI4_70072 NZ_CAJZAS010000227.1 GeneMarkS-2+ CDS 53127 53789 . + 0 ID=cds-WP_223964975.1;Parent=gene-LDO45_RS29275;Dbxref=GenBank:WP_223964975.1;Name=WP_223964975.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS29275;product=hypothetical protein;protein_id=WP_223964975.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 54235 54741 . - . ID=gene-LDO45_RS29280;Name=LDO45_RS29280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29280 NZ_CAJZAS010000227.1 GeneMarkS-2+ CDS 54235 54741 . - 0 ID=cds-WP_223964976.1;Parent=gene-LDO45_RS29280;Dbxref=GenBank:WP_223964976.1;Name=WP_223964976.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS29280;product=hypothetical protein;protein_id=WP_223964976.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 54972 55952 . + . ID=gene-LDO45_RS29285;Name=LDO45_RS29285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29285;old_locus_tag=BDI4_70075 NZ_CAJZAS010000227.1 Protein Homology CDS 54972 55952 . + 0 ID=cds-WP_374109558.1;Parent=gene-LDO45_RS29285;Dbxref=GenBank:WP_374109558.1;Name=WP_374109558.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011350311.1;locus_tag=LDO45_RS29285;product=lysozyme inhibitor LprI family protein;protein_id=WP_374109558.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 56271 56684 . + . ID=gene-LDO45_RS29290;Name=LDO45_RS29290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29290;old_locus_tag=BDI4_70076 NZ_CAJZAS010000227.1 Protein Homology CDS 56271 56684 . + 0 ID=cds-WP_223964978.1;Parent=gene-LDO45_RS29290;Dbxref=GenBank:WP_223964978.1;Name=WP_223964978.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760672.1;locus_tag=LDO45_RS29290;product=DoxX family protein;protein_id=WP_223964978.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 56848 57792 . + . ID=gene-LDO45_RS29295;Name=LDO45_RS29295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29295;old_locus_tag=BDI4_70077 NZ_CAJZAS010000227.1 Protein Homology CDS 56848 57792 . + 0 ID=cds-WP_223964979.1;Parent=gene-LDO45_RS29295;Dbxref=GenBank:WP_223964979.1;Name=WP_223964979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750596.1;locus_tag=LDO45_RS29295;product=SDR family oxidoreductase;protein_id=WP_223964979.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 57998 58393 . + . ID=gene-LDO45_RS29300;Name=LDO45_RS29300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29300 NZ_CAJZAS010000227.1 GeneMarkS-2+ CDS 57998 58393 . + 0 ID=cds-WP_223964980.1;Parent=gene-LDO45_RS29300;Dbxref=GenBank:WP_223964980.1;Name=WP_223964980.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS29300;product=hypothetical protein;protein_id=WP_223964980.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 58550 61840 . + . ID=gene-LDO45_RS29305;Name=LDO45_RS29305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29305;old_locus_tag=BDI4_70078 NZ_CAJZAS010000227.1 Protein Homology CDS 58550 61840 . + 0 ID=cds-WP_374109559.1;Parent=gene-LDO45_RS29305;Dbxref=GenBank:WP_374109559.1;Name=WP_374109559.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490840.1;locus_tag=LDO45_RS29305;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_374109559.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 62138 62566 . + . ID=gene-LDO45_RS29310;Name=LDO45_RS29310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29310;old_locus_tag=BDI4_70079 NZ_CAJZAS010000227.1 GeneMarkS-2+ CDS 62138 62566 . + 0 ID=cds-WP_223964982.1;Parent=gene-LDO45_RS29310;Dbxref=GenBank:WP_223964982.1;Name=WP_223964982.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS29310;product=hypothetical protein;protein_id=WP_223964982.1;transl_table=11 NZ_CAJZAS010000227.1 RefSeq gene 62886 64183 . - . ID=gene-LDO45_RS29315;Name=LDO45_RS29315;end_range=64183,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29315;old_locus_tag=BDI4_70081;partial=true NZ_CAJZAS010000227.1 Protein Homology CDS 62886 64183 . - 2 ID=cds-WP_223964983.1;Parent=gene-LDO45_RS29315;Dbxref=GenBank:WP_223964983.1;Name=WP_223964983.1;Ontology_term=GO:0055085,GO:0022857;end_range=64183,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479962.1;locus_tag=LDO45_RS29315;partial=true;product=APC family permease;protein_id=WP_223964983.1;transl_table=11 ##sequence-region NZ_CAJZAS010000228.1 1 86697 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000228.1 RefSeq region 1 86697 . + . ID=NZ_CAJZAS010000228.1:1..86697;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_70 NZ_CAJZAS010000228.1 RefSeq pseudogene 1 723 . - . ID=gene-LDO45_RS29320;Name=LDO45_RS29320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS29320;old_locus_tag=BDI4_700002;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000228.1 Protein Homology CDS 1 723 . - 0 ID=cds-LDO45_RS29320;Parent=gene-LDO45_RS29320;Note=too many ambiguous residues%3B incomplete%3B missing C-terminus;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896256.1;locus_tag=LDO45_RS29320;partial=true;product=citrate/2-methylcitrate synthase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 863 2254 . + . ID=gene-LDO45_RS29325;Name=LDO45_RS29325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29325;old_locus_tag=BDI4_700003 NZ_CAJZAS010000228.1 Protein Homology CDS 863 2254 . + 0 ID=cds-WP_223964986.1;Parent=gene-LDO45_RS29325;Dbxref=GenBank:WP_223964986.1;Name=WP_223964986.1;Ontology_term=GO:0003824,GO:0008410;gbkey=CDS;go_function=catalytic activity|0003824||IEA,CoA-transferase activity|0008410||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755663.1;locus_tag=LDO45_RS29325;product=CoA transferase;protein_id=WP_223964986.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 2276 3022 . - . ID=gene-LDO45_RS29330;Name=LDO45_RS29330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29330;old_locus_tag=BDI4_700004 NZ_CAJZAS010000228.1 Protein Homology CDS 2276 3022 . - 0 ID=cds-WP_059528318.1;Parent=gene-LDO45_RS29330;Dbxref=GenBank:WP_059528318.1;Name=WP_059528318.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185897.1;locus_tag=LDO45_RS29330;product=GntR family transcriptional regulator;protein_id=WP_059528318.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 3191 4036 . + . ID=gene-LDO45_RS29335;Name=LDO45_RS29335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29335;old_locus_tag=BDI4_700005 NZ_CAJZAS010000228.1 Protein Homology CDS 3191 4036 . + 0 ID=cds-WP_223964987.1;Parent=gene-LDO45_RS29335;Dbxref=GenBank:WP_223964987.1;Name=WP_223964987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398516.1;locus_tag=LDO45_RS29335;product=aldo/keto reductase;protein_id=WP_223964987.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 4047 4511 . - . ID=gene-LDO45_RS34445;Name=LDO45_RS34445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34445 NZ_CAJZAS010000228.1 GeneMarkS-2+ CDS 4047 4511 . - 0 ID=cds-WP_308051279.1;Parent=gene-LDO45_RS34445;Dbxref=GenBank:WP_308051279.1;Name=WP_308051279.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34445;product=hypothetical protein;protein_id=WP_308051279.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 5329 6339 . - . ID=gene-LDO45_RS29345;Name=LDO45_RS29345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29345;old_locus_tag=BDI4_700007 NZ_CAJZAS010000228.1 Protein Homology CDS 5329 6339 . - 0 ID=cds-WP_223964988.1;Parent=gene-LDO45_RS29345;Dbxref=GenBank:WP_223964988.1;Name=WP_223964988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496148.1;locus_tag=LDO45_RS29345;product=HoxN/HupN/NixA family nickel/cobalt transporter;protein_id=WP_223964988.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 6525 8636 . - . ID=gene-LDO45_RS29350;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=LDO45_RS29350;old_locus_tag=BDI4_700008 NZ_CAJZAS010000228.1 Protein Homology CDS 6525 8636 . - 0 ID=cds-WP_059692211.1;Parent=gene-LDO45_RS29350;Dbxref=GenBank:WP_059692211.1;Name=WP_059692211.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329077.1;locus_tag=LDO45_RS29350;product=elongation factor G;protein_id=WP_059692211.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 8862 9362 . - . ID=gene-LDO45_RS29355;Name=LDO45_RS29355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29355;old_locus_tag=BDI4_700009 NZ_CAJZAS010000228.1 Protein Homology CDS 8862 9362 . - 0 ID=cds-WP_059465624.1;Parent=gene-LDO45_RS29355;Dbxref=GenBank:WP_059465624.1;Name=WP_059465624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333961.1;locus_tag=LDO45_RS29355;product=DUF192 domain-containing protein;protein_id=WP_059465624.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 9523 9741 . - . ID=gene-LDO45_RS29360;Name=LDO45_RS29360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29360;old_locus_tag=BDI4_700010 NZ_CAJZAS010000228.1 Protein Homology CDS 9523 9741 . - 0 ID=cds-WP_072444916.1;Parent=gene-LDO45_RS29360;Dbxref=GenBank:WP_072444916.1;Name=WP_072444916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398520.1;locus_tag=LDO45_RS29360;product=hypothetical protein;protein_id=WP_072444916.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 10023 10601 . - . ID=gene-LDO45_RS29365;Name=LDO45_RS29365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29365;old_locus_tag=BDI4_700012 NZ_CAJZAS010000228.1 Protein Homology CDS 10023 10601 . - 0 ID=cds-WP_059527744.1;Parent=gene-LDO45_RS29365;Dbxref=GenBank:WP_059527744.1;Name=WP_059527744.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982,GO:0016866;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA,intramolecular transferase activity|0016866||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410687.1;locus_tag=LDO45_RS29365;product=pseudouridine synthase;protein_id=WP_059527744.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 10875 12131 . + . ID=gene-LDO45_RS29370;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=LDO45_RS29370;old_locus_tag=BDI4_700014 NZ_CAJZAS010000228.1 Protein Homology CDS 10875 12131 . + 0 ID=cds-WP_044845581.1;Parent=gene-LDO45_RS29370;Dbxref=GenBank:WP_044845581.1;Name=WP_044845581.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020069124.1;locus_tag=LDO45_RS29370;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_044845581.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 12412 14640 . + . ID=gene-LDO45_RS29375;Name=LDO45_RS29375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29375;old_locus_tag=BDI4_700015 NZ_CAJZAS010000228.1 Protein Homology CDS 12412 14640 . + 0 ID=cds-WP_223964989.1;Parent=gene-LDO45_RS29375;Dbxref=GenBank:WP_223964989.1;Name=WP_223964989.1;Ontology_term=GO:0006099,GO:0004450;gbkey=CDS;go_function=isocitrate dehydrogenase (NADP+) activity|0004450||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723497.1;locus_tag=LDO45_RS29375;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_223964989.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 14776 15000 . - . ID=gene-LDO45_RS29380;Name=LDO45_RS29380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29380;old_locus_tag=BDI4_700016 NZ_CAJZAS010000228.1 Protein Homology CDS 14776 15000 . - 0 ID=cds-WP_223964990.1;Parent=gene-LDO45_RS29380;Dbxref=GenBank:WP_223964990.1;Name=WP_223964990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478028.1;locus_tag=LDO45_RS29380;product=hypothetical protein;protein_id=WP_223964990.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 15116 15607 . - . ID=gene-LDO45_RS29385;Name=LDO45_RS29385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29385 NZ_CAJZAS010000228.1 GeneMarkS-2+ CDS 15116 15607 . - 0 ID=cds-WP_223964991.1;Parent=gene-LDO45_RS29385;Dbxref=GenBank:WP_223964991.1;Name=WP_223964991.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS29385;product=hypothetical protein;protein_id=WP_223964991.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 15683 17290 . + . ID=gene-LDO45_RS29390;Name=LDO45_RS29390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29390;old_locus_tag=BDI4_700017 NZ_CAJZAS010000228.1 Protein Homology CDS 15683 17290 . + 0 ID=cds-WP_223964992.1;Parent=gene-LDO45_RS29390;Dbxref=GenBank:WP_223964992.1;Name=WP_223964992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546020.1;locus_tag=LDO45_RS29390;product=multicopper oxidase family protein;protein_id=WP_223964992.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 17470 17673 . - . ID=gene-LDO45_RS29395;Name=LDO45_RS29395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29395;old_locus_tag=BDI4_700018 NZ_CAJZAS010000228.1 Protein Homology CDS 17470 17673 . - 0 ID=cds-WP_004196460.1;Parent=gene-LDO45_RS29395;Dbxref=GenBank:WP_004196460.1;Name=WP_004196460.1;Ontology_term=GO:0001072,GO:0003676,GO:0003723,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,nucleic acid binding|0003676||IEA,RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016687461.1;locus_tag=LDO45_RS29395;product=cold-shock protein;protein_id=WP_004196460.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 18222 18536 . + . ID=gene-LDO45_RS29400;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=LDO45_RS29400;old_locus_tag=BDI4_700020 NZ_CAJZAS010000228.1 Protein Homology CDS 18222 18536 . + 0 ID=cds-WP_006398529.1;Parent=gene-LDO45_RS29400;Dbxref=GenBank:WP_006398529.1;Name=WP_006398529.1;gbkey=CDS;gene=clpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012080368.1;locus_tag=LDO45_RS29400;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_006398529.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 18533 20833 . + . ID=gene-LDO45_RS29405;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=LDO45_RS29405;old_locus_tag=BDI4_700021 NZ_CAJZAS010000228.1 Protein Homology CDS 18533 20833 . + 0 ID=cds-WP_059527738.1;Parent=gene-LDO45_RS29405;Dbxref=GenBank:WP_059527738.1;Name=WP_059527738.1;Ontology_term=GO:0006508,GO:0043335,GO:0004176,GO:0016887,GO:0009368;gbkey=CDS;gene=clpA;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546019.1;locus_tag=LDO45_RS29405;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_059527738.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 20937 22316 . + . ID=gene-LDO45_RS29410;Name=LDO45_RS29410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29410;old_locus_tag=BDI4_700022 NZ_CAJZAS010000228.1 Protein Homology CDS 20937 22316 . + 0 ID=cds-WP_223964993.1;Parent=gene-LDO45_RS29410;Dbxref=GenBank:WP_223964993.1;Name=WP_223964993.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006488957.1;locus_tag=LDO45_RS29410;product=amino acid permease;protein_id=WP_223964993.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 22458 23228 . + . ID=gene-LDO45_RS29415;Name=LDO45_RS29415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29415;old_locus_tag=BDI4_700023 NZ_CAJZAS010000228.1 Protein Homology CDS 22458 23228 . + 0 ID=cds-WP_059701856.1;Parent=gene-LDO45_RS29415;Dbxref=GenBank:WP_059701856.1;Name=WP_059701856.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329071.1;locus_tag=LDO45_RS29415;product=hypothetical protein;protein_id=WP_059701856.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 23283 23729 . - . ID=gene-LDO45_RS29420;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=LDO45_RS29420;old_locus_tag=BDI4_700024 NZ_CAJZAS010000228.1 Protein Homology CDS 23283 23729 . - 0 ID=cds-WP_059468295.1;Parent=gene-LDO45_RS29420;Dbxref=GenBank:WP_059468295.1;Name=WP_059468295.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602380.1;locus_tag=LDO45_RS29420;product=dUTP diphosphatase;protein_id=WP_059468295.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 23785 24996 . - . ID=gene-LDO45_RS29425;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=LDO45_RS29425;old_locus_tag=BDI4_700025 NZ_CAJZAS010000228.1 Protein Homology CDS 23785 24996 . - 0 ID=cds-WP_059527730.1;Parent=gene-LDO45_RS29425;Dbxref=GenBank:WP_059527730.1;Name=WP_059527730.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851204.1;locus_tag=LDO45_RS29425;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_059527730.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 25064 25564 . - . ID=gene-LDO45_RS29430;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=LDO45_RS29430;old_locus_tag=BDI4_700026 NZ_CAJZAS010000228.1 Protein Homology CDS 25064 25564 . - 0 ID=cds-WP_059527727.1;Parent=gene-LDO45_RS29430;Dbxref=GenBank:WP_059527727.1;Name=WP_059527727.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333949.1;locus_tag=LDO45_RS29430;product=signal peptidase II;protein_id=WP_059527727.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 25567 28404 . - . ID=gene-LDO45_RS29435;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=LDO45_RS29435;old_locus_tag=BDI4_700027 NZ_CAJZAS010000228.1 Protein Homology CDS 25567 28404 . - 0 ID=cds-WP_059701858.1;Parent=gene-LDO45_RS29435;Dbxref=GenBank:WP_059701858.1;Name=WP_059701858.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352960.1;locus_tag=LDO45_RS29435;product=isoleucine--tRNA ligase;protein_id=WP_059701858.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 28507 29499 . - . ID=gene-LDO45_RS29440;Name=LDO45_RS29440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29440;old_locus_tag=BDI4_700028 NZ_CAJZAS010000228.1 Protein Homology CDS 28507 29499 . - 0 ID=cds-WP_223964994.1;Parent=gene-LDO45_RS29440;Dbxref=GenBank:WP_223964994.1;Name=WP_223964994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750061.1;locus_tag=LDO45_RS29440;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_223964994.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 29623 30285 . + . ID=gene-LDO45_RS29445;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=LDO45_RS29445;old_locus_tag=BDI4_700029 NZ_CAJZAS010000228.1 Protein Homology CDS 29623 30285 . + 0 ID=cds-WP_059527718.1;Parent=gene-LDO45_RS29445;Dbxref=GenBank:WP_059527718.1;Name=WP_059527718.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892597.1;locus_tag=LDO45_RS29445;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_059527718.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 30282 31544 . + . ID=gene-LDO45_RS29450;Name=LDO45_RS29450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29450;old_locus_tag=BDI4_700030 NZ_CAJZAS010000228.1 Protein Homology CDS 30282 31544 . + 0 ID=cds-WP_223964995.1;Parent=gene-LDO45_RS29450;Dbxref=GenBank:WP_223964995.1;Name=WP_223964995.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554551.1;locus_tag=LDO45_RS29450;product=RsmB/NOP family class I SAM-dependent RNA methyltransferase;protein_id=WP_223964995.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 31560 32939 . + . ID=gene-LDO45_RS29455;Name=LDO45_RS29455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29455;old_locus_tag=BDI4_700031 NZ_CAJZAS010000228.1 Protein Homology CDS 31560 32939 . + 0 ID=cds-WP_223964996.1;Parent=gene-LDO45_RS29455;Dbxref=GenBank:WP_223964996.1;Name=WP_223964996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896279.1;locus_tag=LDO45_RS29455;product=mechanosensitive ion channel family protein;protein_id=WP_223964996.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 33150 34346 . + . ID=gene-LDO45_RS29460;Name=LDO45_RS29460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29460;old_locus_tag=BDI4_700033 NZ_CAJZAS010000228.1 Protein Homology CDS 33150 34346 . + 0 ID=cds-WP_059527709.1;Parent=gene-LDO45_RS29460;Dbxref=GenBank:WP_059527709.1;Name=WP_059527709.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012434118.1;locus_tag=LDO45_RS29460;product=acyl-CoA desaturase;protein_id=WP_059527709.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 34604 35740 . + . ID=gene-LDO45_RS29465;Name=nadA;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=LDO45_RS29465;old_locus_tag=BDI4_700034 NZ_CAJZAS010000228.1 Protein Homology CDS 34604 35740 . + 0 ID=cds-WP_223964997.1;Parent=gene-LDO45_RS29465;Dbxref=GenBank:WP_223964997.1;Name=WP_223964997.1;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;gene=nadA;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329066.1;locus_tag=LDO45_RS29465;product=quinolinate synthase NadA;protein_id=WP_223964997.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 35737 36618 . + . ID=gene-LDO45_RS29470;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=LDO45_RS29470;old_locus_tag=BDI4_700035 NZ_CAJZAS010000228.1 Protein Homology CDS 35737 36618 . + 0 ID=cds-WP_059701864.1;Parent=gene-LDO45_RS29470;Dbxref=GenBank:WP_059701864.1;Name=WP_059701864.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329065.1;locus_tag=LDO45_RS29470;product=carboxylating nicotinate-nucleotide diphosphorylase;protein_id=WP_059701864.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 36708 38294 . - . ID=gene-LDO45_RS29475;Name=nadB;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=LDO45_RS29475;old_locus_tag=BDI4_700036 NZ_CAJZAS010000228.1 Protein Homology CDS 36708 38294 . - 0 ID=cds-WP_059527704.1;Parent=gene-LDO45_RS29475;Dbxref=GenBank:WP_059527704.1;Name=WP_059527704.1;Ontology_term=GO:0009435,GO:0008734;gbkey=CDS;gene=nadB;go_function=L-aspartate oxidase activity|0008734||IEA;go_process=NAD biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885766.1;locus_tag=LDO45_RS29475;product=L-aspartate oxidase;protein_id=WP_059527704.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 38455 38622 . - . ID=gene-LDO45_RS29480;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=LDO45_RS29480;old_locus_tag=BDI4_700037 NZ_CAJZAS010000228.1 Protein Homology CDS 38455 38622 . - 0 ID=cds-WP_006478046.1;Parent=gene-LDO45_RS29480;Dbxref=GenBank:WP_006478046.1;Name=WP_006478046.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180630.1;locus_tag=LDO45_RS29480;product=50S ribosomal protein L33;protein_id=WP_006478046.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 38640 38873 . - . ID=gene-LDO45_RS29485;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=LDO45_RS29485;old_locus_tag=BDI4_700038 NZ_CAJZAS010000228.1 Protein Homology CDS 38640 38873 . - 0 ID=cds-WP_004186391.1;Parent=gene-LDO45_RS29485;Dbxref=GenBank:WP_004186391.1;Name=WP_004186391.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007586227.1;locus_tag=LDO45_RS29485;product=50S ribosomal protein L28;protein_id=WP_004186391.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 39112 39891 . - . ID=gene-LDO45_RS29490;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=LDO45_RS29490;old_locus_tag=BDI4_700039 NZ_CAJZAS010000228.1 Protein Homology CDS 39112 39891 . - 0 ID=cds-WP_059692221.1;Parent=gene-LDO45_RS29490;Dbxref=GenBank:WP_059692221.1;Name=WP_059692221.1;Ontology_term=GO:0006281,GO:0003677;gbkey=CDS;gene=radC;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885765.1;locus_tag=LDO45_RS29490;product=DNA repair protein RadC;protein_id=WP_059692221.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 40027 40482 . + . ID=gene-LDO45_RS29495;Name=LDO45_RS29495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29495;old_locus_tag=BDI4_700040 NZ_CAJZAS010000228.1 Protein Homology CDS 40027 40482 . + 0 ID=cds-WP_059468284.1;Parent=gene-LDO45_RS29495;Dbxref=GenBank:WP_059468284.1;Name=WP_059468284.1;Ontology_term=GO:0006457,GO:0003755,GO:0046872;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,metal ion binding|0046872||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892571.1;locus_tag=LDO45_RS29495;product=peptidylprolyl isomerase;protein_id=WP_059468284.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 40485 41465 . + . ID=gene-LDO45_RS29500;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=LDO45_RS29500;old_locus_tag=BDI4_700041 NZ_CAJZAS010000228.1 Protein Homology CDS 40485 41465 . + 0 ID=cds-WP_006488968.1;Parent=gene-LDO45_RS29500;Dbxref=GenBank:WP_006488968.1;Name=WP_006488968.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892570.1;locus_tag=LDO45_RS29500;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_006488968.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq pseudogene 41736 42571 . + . ID=gene-LDO45_RS29505;Name=LDO45_RS29505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS29505;old_locus_tag=BDI4_700043;pseudo=true NZ_CAJZAS010000228.1 Protein Homology CDS 41736 42571 . + 0 ID=cds-LDO45_RS29505;Parent=gene-LDO45_RS29505;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757319.1;locus_tag=LDO45_RS29505;product=branched-chain amino acid ABC transporter;pseudo=true;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 42783 43733 . + . ID=gene-LDO45_RS29510;Name=LDO45_RS29510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29510;old_locus_tag=BDI4_700044 NZ_CAJZAS010000228.1 Protein Homology CDS 42783 43733 . + 0 ID=cds-WP_059468282.1;Parent=gene-LDO45_RS29510;Dbxref=GenBank:WP_059468282.1;Name=WP_059468282.1;Ontology_term=GO:0015658,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885761.1;locus_tag=LDO45_RS29510;product=branched-chain amino acid ABC transporter permease;protein_id=WP_059468282.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 43753 44922 . + . ID=gene-LDO45_RS29515;Name=LDO45_RS29515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29515;old_locus_tag=BDI4_700045 NZ_CAJZAS010000228.1 Protein Homology CDS 43753 44922 . + 0 ID=cds-WP_059538404.1;Parent=gene-LDO45_RS29515;Dbxref=GenBank:WP_059538404.1;Name=WP_059538404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478052.1;locus_tag=LDO45_RS29515;product=ABC transporter ATP-binding protein;protein_id=WP_059538404.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 44947 45723 . + . ID=gene-LDO45_RS29520;Name=LDO45_RS29520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29520;old_locus_tag=BDI4_700046 NZ_CAJZAS010000228.1 Protein Homology CDS 44947 45723 . + 0 ID=cds-WP_011352945.1;Parent=gene-LDO45_RS29520;Dbxref=GenBank:WP_011352945.1;Name=WP_011352945.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008351156.1;locus_tag=LDO45_RS29520;product=ABC transporter ATP-binding protein;protein_id=WP_011352945.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 45723 46439 . + . ID=gene-LDO45_RS29525;Name=LDO45_RS29525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29525;old_locus_tag=BDI4_700047 NZ_CAJZAS010000228.1 Protein Homology CDS 45723 46439 . + 0 ID=cds-WP_027785191.1;Parent=gene-LDO45_RS29525;Dbxref=GenBank:WP_027785191.1;Name=WP_027785191.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478054.1;locus_tag=LDO45_RS29525;product=ABC transporter ATP-binding protein;protein_id=WP_027785191.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 46717 47388 . + . ID=gene-LDO45_RS29530;Name=LDO45_RS29530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29530;old_locus_tag=BDI4_700048 NZ_CAJZAS010000228.1 Protein Homology CDS 46717 47388 . + 0 ID=cds-WP_059527695.1;Parent=gene-LDO45_RS29530;Dbxref=GenBank:WP_059527695.1;Name=WP_059527695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750045.1;locus_tag=LDO45_RS29530;product=DUF2278 family protein;protein_id=WP_059527695.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 47404 47859 . - . ID=gene-LDO45_RS29535;Name=LDO45_RS29535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29535;old_locus_tag=BDI4_700049 NZ_CAJZAS010000228.1 Protein Homology CDS 47404 47859 . - 0 ID=cds-WP_021160763.1;Parent=gene-LDO45_RS29535;Dbxref=GenBank:WP_021160763.1;Name=WP_021160763.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757315.1;locus_tag=LDO45_RS29535;product=GNAT family acetyltransferase;protein_id=WP_021160763.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 47873 49057 . - . ID=gene-LDO45_RS29540;Name=LDO45_RS29540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29540;old_locus_tag=BDI4_700050 NZ_CAJZAS010000228.1 Protein Homology CDS 47873 49057 . - 0 ID=cds-WP_223964998.1;Parent=gene-LDO45_RS29540;Dbxref=GenBank:WP_223964998.1;Name=WP_223964998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522595.1;locus_tag=LDO45_RS29540;product=acetylornithine transaminase;protein_id=WP_223964998.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 49352 50383 . - . ID=gene-LDO45_RS29545;Name=LDO45_RS29545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29545;old_locus_tag=BDI4_700051 NZ_CAJZAS010000228.1 Protein Homology CDS 49352 50383 . - 0 ID=cds-WP_059527685.1;Parent=gene-LDO45_RS29545;Dbxref=GenBank:WP_059527685.1;Name=WP_059527685.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413312.1;locus_tag=LDO45_RS29545;product=CDP-6-deoxy-delta-3%2C4-glucoseen reductase;protein_id=WP_059527685.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 50489 51526 . + . ID=gene-LDO45_RS29550;Name=LDO45_RS29550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29550;old_locus_tag=BDI4_700052 NZ_CAJZAS010000228.1 Protein Homology CDS 50489 51526 . + 0 ID=cds-WP_223964999.1;Parent=gene-LDO45_RS29550;Dbxref=GenBank:WP_223964999.1;Name=WP_223964999.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492821.1;locus_tag=LDO45_RS29550;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_223964999.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 51509 51697 . - . ID=gene-LDO45_RS29555;Name=LDO45_RS29555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29555;old_locus_tag=BDI4_700053 NZ_CAJZAS010000228.1 Protein Homology CDS 51509 51697 . - 0 ID=cds-WP_059527680.1;Parent=gene-LDO45_RS29555;Dbxref=GenBank:WP_059527680.1;Name=WP_059527680.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546000.1;locus_tag=LDO45_RS29555;product=hypothetical protein;protein_id=WP_059527680.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 51803 52519 . - . ID=gene-LDO45_RS29560;Name=LDO45_RS29560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29560;old_locus_tag=BDI4_700054 NZ_CAJZAS010000228.1 Protein Homology CDS 51803 52519 . - 0 ID=cds-WP_059701872.1;Parent=gene-LDO45_RS29560;Dbxref=GenBank:WP_059701872.1;Name=WP_059701872.1;Ontology_term=GO:0009982;gbkey=CDS;go_function=pseudouridine synthase activity|0009982||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896298.1;locus_tag=LDO45_RS29560;product=pseudouridine synthase;protein_id=WP_059701872.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 52738 53238 . + . ID=gene-LDO45_RS29565;Name=LDO45_RS29565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29565;old_locus_tag=BDI4_700055 NZ_CAJZAS010000228.1 Protein Homology CDS 52738 53238 . + 0 ID=cds-WP_059692225.1;Parent=gene-LDO45_RS29565;Dbxref=GenBank:WP_059692225.1;Name=WP_059692225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545997.1;locus_tag=LDO45_RS29565;product=DinB family protein;protein_id=WP_059692225.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 53438 54211 . + . ID=gene-LDO45_RS29570;Name=LDO45_RS29570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29570;old_locus_tag=BDI4_700056 NZ_CAJZAS010000228.1 Protein Homology CDS 53438 54211 . + 0 ID=cds-WP_059450952.1;Parent=gene-LDO45_RS29570;Dbxref=GenBank:WP_059450952.1;Name=WP_059450952.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090962.1;locus_tag=LDO45_RS29570;product=SDR family oxidoreductase;protein_id=WP_059450952.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 54390 55319 . + . ID=gene-LDO45_RS29575;Name=LDO45_RS29575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29575;old_locus_tag=BDI4_700057 NZ_CAJZAS010000228.1 Protein Homology CDS 54390 55319 . + 0 ID=cds-WP_223965000.1;Parent=gene-LDO45_RS29575;Dbxref=GenBank:WP_223965000.1;Name=WP_223965000.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212875.1;locus_tag=LDO45_RS29575;product=LysR family transcriptional regulator;protein_id=WP_223965000.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 55337 56233 . - . ID=gene-LDO45_RS29580;Name=LDO45_RS29580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29580;old_locus_tag=BDI4_700058 NZ_CAJZAS010000228.1 Protein Homology CDS 55337 56233 . - 0 ID=cds-WP_223965001.1;Parent=gene-LDO45_RS29580;Dbxref=GenBank:WP_223965001.1;Name=WP_223965001.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352932.1;locus_tag=LDO45_RS29580;product=LysR family transcriptional regulator;protein_id=WP_223965001.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 56338 57228 . + . ID=gene-LDO45_RS29585;Name=LDO45_RS29585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29585;old_locus_tag=BDI4_700059 NZ_CAJZAS010000228.1 Protein Homology CDS 56338 57228 . + 0 ID=cds-WP_223965002.1;Parent=gene-LDO45_RS29585;Dbxref=GenBank:WP_223965002.1;Name=WP_223965002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496128.1;locus_tag=LDO45_RS29585;product=alpha/beta fold hydrolase;protein_id=WP_223965002.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 57269 57439 . - . ID=gene-LDO45_RS29590;Name=LDO45_RS29590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29590;old_locus_tag=BDI4_700060 NZ_CAJZAS010000228.1 Protein Homology CDS 57269 57439 . - 0 ID=cds-WP_223965003.1;Parent=gene-LDO45_RS29590;Dbxref=GenBank:WP_223965003.1;Name=WP_223965003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896304.1;locus_tag=LDO45_RS29590;product=hypothetical protein;protein_id=WP_223965003.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 57916 58992 . - . ID=gene-LDO45_RS29595;Name=LDO45_RS29595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29595;old_locus_tag=BDI4_700062 NZ_CAJZAS010000228.1 Protein Homology CDS 57916 58992 . - 0 ID=cds-WP_223965004.1;Parent=gene-LDO45_RS29595;Dbxref=GenBank:WP_223965004.1;Name=WP_223965004.1;Ontology_term=GO:0006260;gbkey=CDS;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:NF016998.5;locus_tag=LDO45_RS29595;product=phage/plasmid replication protein%2C II/X family;protein_id=WP_223965004.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 59039 59275 . - . ID=gene-LDO45_RS29600;Name=LDO45_RS29600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29600;old_locus_tag=BDI4_700063 NZ_CAJZAS010000228.1 Protein Homology CDS 59039 59275 . - 0 ID=cds-WP_223965005.1;Parent=gene-LDO45_RS29600;Dbxref=GenBank:WP_223965005.1;Name=WP_223965005.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF017717.5;locus_tag=LDO45_RS29600;product=AlpA family transcriptional regulator;protein_id=WP_223965005.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 59554 60267 . - . ID=gene-LDO45_RS29605;Name=LDO45_RS29605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29605;old_locus_tag=BDI4_700064 NZ_CAJZAS010000228.1 GeneMarkS-2+ CDS 59554 60267 . - 0 ID=cds-WP_223965006.1;Parent=gene-LDO45_RS29605;Dbxref=GenBank:WP_223965006.1;Name=WP_223965006.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS29605;product=hypothetical protein;protein_id=WP_223965006.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 60660 61640 . - . ID=gene-LDO45_RS29610;Name=LDO45_RS29610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29610;old_locus_tag=BDI4_700067 NZ_CAJZAS010000228.1 Protein Homology CDS 60660 61640 . - 0 ID=cds-WP_223965007.1;Parent=gene-LDO45_RS29610;Dbxref=GenBank:WP_223965007.1;Name=WP_223965007.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024275.5;locus_tag=LDO45_RS29610;product=hypothetical protein;protein_id=WP_223965007.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq pseudogene 61720 62031 . - . ID=gene-LDO45_RS34630;Name=gspG;end_range=62031,.;gbkey=Gene;gene=gspG;gene_biotype=pseudogene;locus_tag=LDO45_RS34630;partial=true;pseudo=true;start_range=.,61720 NZ_CAJZAS010000228.1 Protein Homology CDS 61720 62031 . - 0 ID=cds-LDO45_RS34630;Parent=gene-LDO45_RS34630;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0015628,GO:0015627;end_range=62031,.;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751354.1;locus_tag=LDO45_RS34630;partial=true;product=type II secretion system major pseudopilin GspG;pseudo=true;start_range=.,61720;transl_table=11 NZ_CAJZAS010000228.1 RefSeq pseudogene 62074 62271 . - . ID=gene-LDO45_RS34635;Name=LDO45_RS34635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34635;partial=true;pseudo=true;start_range=.,62074 NZ_CAJZAS010000228.1 Protein Homology CDS 62074 62271 . - 0 ID=cds-LDO45_RS34635;Parent=gene-LDO45_RS34635;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033894.1;locus_tag=LDO45_RS34635;partial=true;product=EexN family lipoprotein;pseudo=true;start_range=.,62074;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 62399 62650 . + . ID=gene-LDO45_RS29625;Name=LDO45_RS29625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29625;old_locus_tag=BDI4_700069 NZ_CAJZAS010000228.1 Protein Homology CDS 62399 62650 . + 0 ID=cds-WP_223965008.1;Parent=gene-LDO45_RS29625;Dbxref=GenBank:WP_223965008.1;Name=WP_223965008.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF013540.5;locus_tag=LDO45_RS29625;product=helix-turn-helix domain-containing protein;protein_id=WP_223965008.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 62779 65112 . + . ID=gene-LDO45_RS29630;Name=LDO45_RS29630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29630;old_locus_tag=BDI4_700070 NZ_CAJZAS010000228.1 Protein Homology CDS 62779 65112 . + 0 ID=cds-WP_223965009.1;Parent=gene-LDO45_RS29630;Dbxref=GenBank:WP_223965009.1;Name=WP_223965009.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF047389.1;locus_tag=LDO45_RS29630;product=P-loop ATPase%2C Sll1717 family;protein_id=WP_223965009.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 65182 66087 . + . ID=gene-LDO45_RS29635;Name=LDO45_RS29635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29635;old_locus_tag=BDI4_700073 NZ_CAJZAS010000228.1 GeneMarkS-2+ CDS 65182 66087 . + 0 ID=cds-WP_223965010.1;Parent=gene-LDO45_RS29635;Dbxref=GenBank:WP_223965010.1;Name=WP_223965010.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS29635;product=hypothetical protein;protein_id=WP_223965010.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 66348 66923 . + . ID=gene-LDO45_RS29640;Name=LDO45_RS29640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29640;old_locus_tag=BDI4_700074 NZ_CAJZAS010000228.1 Protein Homology CDS 66348 66923 . + 0 ID=cds-WP_223965011.1;Parent=gene-LDO45_RS29640;Dbxref=GenBank:WP_223965011.1;Name=WP_223965011.1;Ontology_term=GO:0006310,GO:0000150,GO:0003677;gbkey=CDS;go_function=DNA strand exchange activity|0000150||IEA,DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018440545.1;locus_tag=LDO45_RS29640;product=recombinase family protein;protein_id=WP_223965011.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 66936 67643 . - . ID=gene-LDO45_RS29645;Name=LDO45_RS29645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29645;old_locus_tag=BDI4_700075 NZ_CAJZAS010000228.1 Protein Homology CDS 66936 67643 . - 0 ID=cds-WP_223965012.1;Parent=gene-LDO45_RS29645;Dbxref=GenBank:WP_223965012.1;Name=WP_223965012.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021057.5;locus_tag=LDO45_RS29645;product=TIGR02391 family protein;protein_id=WP_223965012.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 67721 68461 . - . ID=gene-LDO45_RS29650;Name=LDO45_RS29650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29650;old_locus_tag=BDI4_700076 NZ_CAJZAS010000228.1 Protein Homology CDS 67721 68461 . - 0 ID=cds-WP_223965013.1;Parent=gene-LDO45_RS29650;Dbxref=GenBank:WP_223965013.1;Name=WP_223965013.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039499.4;locus_tag=LDO45_RS29650;product=DUF5677 domain-containing protein;protein_id=WP_223965013.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 68482 69699 . - . ID=gene-LDO45_RS29655;Name=LDO45_RS29655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29655;old_locus_tag=BDI4_700077 NZ_CAJZAS010000228.1 Protein Homology CDS 68482 69699 . - 0 ID=cds-WP_223965014.1;Parent=gene-LDO45_RS29655;Dbxref=GenBank:WP_223965014.1;Name=WP_223965014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004527880.1;locus_tag=LDO45_RS29655;product=integrase arm-type DNA-binding domain-containing protein;protein_id=WP_223965014.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 69873 69957 . - . ID=gene-LDO45_RS29660;Name=LDO45_RS29660;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS29660;old_locus_tag=BDI4_TRNA35 NZ_CAJZAS010000228.1 tRNAscan-SE tRNA 69873 69957 . - . ID=rna-LDO45_RS29660;Parent=gene-LDO45_RS29660;anticodon=(pos:complement(69921..69923));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS29660;product=tRNA-Leu NZ_CAJZAS010000228.1 tRNAscan-SE exon 69873 69957 . - . ID=exon-LDO45_RS29660-1;Parent=rna-LDO45_RS29660;anticodon=(pos:complement(69921..69923));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS29660;product=tRNA-Leu NZ_CAJZAS010000228.1 RefSeq gene 70053 71210 . - . ID=gene-LDO45_RS29665;Name=LDO45_RS29665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29665;old_locus_tag=BDI4_700078 NZ_CAJZAS010000228.1 Protein Homology CDS 70053 71210 . - 0 ID=cds-WP_223965015.1;Parent=gene-LDO45_RS29665;Dbxref=GenBank:WP_223965015.1;Name=WP_223965015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398570.1;locus_tag=LDO45_RS29665;product=ABC transporter substrate-binding protein;protein_id=WP_223965015.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 71275 72216 . - . ID=gene-LDO45_RS29670;Name=LDO45_RS29670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29670;old_locus_tag=BDI4_700079 NZ_CAJZAS010000228.1 Protein Homology CDS 71275 72216 . - 0 ID=cds-WP_009689198.1;Parent=gene-LDO45_RS29670;Dbxref=GenBank:WP_009689198.1;Name=WP_009689198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065144.1;locus_tag=LDO45_RS29670;product=CysB family HTH-type transcriptional regulator;protein_id=WP_009689198.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 72433 74112 . + . ID=gene-LDO45_RS29675;Name=LDO45_RS29675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29675;old_locus_tag=BDI4_700080 NZ_CAJZAS010000228.1 Protein Homology CDS 72433 74112 . + 0 ID=cds-WP_059527662.1;Parent=gene-LDO45_RS29675;Dbxref=GenBank:WP_059527662.1;Name=WP_059527662.1;Ontology_term=GO:0020037,GO:0046872,GO:0050311,GO:0051539;gbkey=CDS;go_function=heme binding|0020037||IEA,metal ion binding|0046872||IEA,sulfite reductase (ferredoxin) activity|0050311||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601281.1;locus_tag=LDO45_RS29675;product=nitrite/sulfite reductase;protein_id=WP_059527662.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 74138 74680 . + . ID=gene-LDO45_RS29680;Name=LDO45_RS29680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29680;old_locus_tag=BDI4_700081 NZ_CAJZAS010000228.1 Protein Homology CDS 74138 74680 . + 0 ID=cds-WP_223965016.1;Parent=gene-LDO45_RS29680;Dbxref=GenBank:WP_223965016.1;Name=WP_223965016.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009892528.1;locus_tag=LDO45_RS29680;product=DUF934 domain-containing protein;protein_id=WP_223965016.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 74677 75420 . + . ID=gene-LDO45_RS29685;Name=LDO45_RS29685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29685;old_locus_tag=BDI4_700082 NZ_CAJZAS010000228.1 Protein Homology CDS 74677 75420 . + 0 ID=cds-WP_059692230.1;Parent=gene-LDO45_RS29685;Dbxref=GenBank:WP_059692230.1;Name=WP_059692230.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657686.1;locus_tag=LDO45_RS29685;product=phosphoadenylyl-sulfate reductase;protein_id=WP_059692230.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 75496 76458 . + . ID=gene-LDO45_RS29690;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=LDO45_RS29690;old_locus_tag=BDI4_700084 NZ_CAJZAS010000228.1 Protein Homology CDS 75496 76458 . + 0 ID=cds-WP_059527653.1;Parent=gene-LDO45_RS29690;Dbxref=GenBank:WP_059527653.1;Name=WP_059527653.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010114318.1;locus_tag=LDO45_RS29690;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_059527653.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 76481 77797 . + . ID=gene-LDO45_RS29695;Name=LDO45_RS29695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29695;old_locus_tag=BDI4_700085 NZ_CAJZAS010000228.1 Protein Homology CDS 76481 77797 . + 0 ID=cds-WP_059527650.1;Parent=gene-LDO45_RS29695;Dbxref=GenBank:WP_059527650.1;Name=WP_059527650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602383.1;locus_tag=LDO45_RS29695;product=sulfate adenylyltransferase subunit 1;protein_id=WP_059527650.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 77873 78622 . + . ID=gene-LDO45_RS29700;Name=cobA;gbkey=Gene;gene=cobA;gene_biotype=protein_coding;locus_tag=LDO45_RS29700;old_locus_tag=BDI4_700086 NZ_CAJZAS010000228.1 Protein Homology CDS 77873 78622 . + 0 ID=cds-WP_059527647.1;Parent=gene-LDO45_RS29700;Dbxref=GenBank:WP_059527647.1;Name=WP_059527647.1;Ontology_term=GO:0019354,GO:0004851;gbkey=CDS;gene=cobA;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750021.1;locus_tag=LDO45_RS29700;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_059527647.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 78703 79086 . - . ID=gene-LDO45_RS29705;Name=LDO45_RS29705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29705;old_locus_tag=BDI4_700087 NZ_CAJZAS010000228.1 Protein Homology CDS 78703 79086 . - 0 ID=cds-WP_223965017.1;Parent=gene-LDO45_RS29705;Dbxref=GenBank:WP_223965017.1;Name=WP_223965017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657682.1;locus_tag=LDO45_RS29705;product=sirohydrochlorin chelatase;protein_id=WP_223965017.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 79112 80260 . - . ID=gene-LDO45_RS29710;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=LDO45_RS29710;old_locus_tag=BDI4_700088 NZ_CAJZAS010000228.1 Protein Homology CDS 79112 80260 . - 0 ID=cds-WP_059527640.1;Parent=gene-LDO45_RS29710;Dbxref=GenBank:WP_059527640.1;Name=WP_059527640.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009903370.1;locus_tag=LDO45_RS29710;product=LPS export ABC transporter permease LptG;protein_id=WP_059527640.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 80264 81355 . - . ID=gene-LDO45_RS29715;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=LDO45_RS29715;old_locus_tag=BDI4_700089 NZ_CAJZAS010000228.1 Protein Homology CDS 80264 81355 . - 0 ID=cds-WP_059527638.1;Parent=gene-LDO45_RS29715;Dbxref=GenBank:WP_059527638.1;Name=WP_059527638.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545981.1;locus_tag=LDO45_RS29715;product=LPS export ABC transporter permease LptF;protein_id=WP_059527638.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 81478 82989 . + . ID=gene-LDO45_RS29720;Name=LDO45_RS29720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29720;old_locus_tag=BDI4_700090 NZ_CAJZAS010000228.1 Protein Homology CDS 81478 82989 . + 0 ID=cds-WP_059527635.1;Parent=gene-LDO45_RS29720;Dbxref=GenBank:WP_059527635.1;Name=WP_059527635.1;Ontology_term=GO:0019538,GO:0070006;gbkey=CDS;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352915.1;locus_tag=LDO45_RS29720;product=leucyl aminopeptidase;protein_id=WP_059527635.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 83024 83440 . + . ID=gene-LDO45_RS29725;Name=LDO45_RS29725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29725;old_locus_tag=BDI4_700091 NZ_CAJZAS010000228.1 Protein Homology CDS 83024 83440 . + 0 ID=cds-WP_059527631.1;Parent=gene-LDO45_RS29725;Dbxref=GenBank:WP_059527631.1;Name=WP_059527631.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750016.1;locus_tag=LDO45_RS29725;product=DNA polymerase III subunit chi;protein_id=WP_059527631.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 83466 84155 . + . ID=gene-LDO45_RS29730;Name=LDO45_RS29730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29730;old_locus_tag=BDI4_700092 NZ_CAJZAS010000228.1 Protein Homology CDS 83466 84155 . + 0 ID=cds-WP_223965018.1;Parent=gene-LDO45_RS29730;Dbxref=GenBank:WP_223965018.1;Name=WP_223965018.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478084.1;locus_tag=LDO45_RS29730;product=DUF2486 family protein;protein_id=WP_223965018.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 84271 84600 . - . ID=gene-LDO45_RS29735;Name=LDO45_RS29735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29735;old_locus_tag=BDI4_700093 NZ_CAJZAS010000228.1 Protein Homology CDS 84271 84600 . - 0 ID=cds-WP_059692234.1;Parent=gene-LDO45_RS29735;Dbxref=GenBank:WP_059692234.1;Name=WP_059692234.1;Ontology_term=GO:0009055,GO:0020037;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496118.1;locus_tag=LDO45_RS29735;product=c-type cytochrome;protein_id=WP_059692234.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 84726 86399 . - . ID=gene-LDO45_RS29740;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=LDO45_RS29740;old_locus_tag=BDI4_700094 NZ_CAJZAS010000228.1 Protein Homology CDS 84726 86399 . - 0 ID=cds-WP_223965019.1;Parent=gene-LDO45_RS29740;Dbxref=GenBank:WP_223965019.1;Name=WP_223965019.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694362.1;locus_tag=LDO45_RS29740;product=dihydroxy-acid dehydratase;protein_id=WP_223965019.1;transl_table=11 NZ_CAJZAS010000228.1 RefSeq gene 86535 86697 . + . ID=gene-LDO45_RS29745;Name=LDO45_RS29745;end_range=86697,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29745;partial=true NZ_CAJZAS010000228.1 Protein Homology CDS 86535 86697 . + 0 ID=cds-WP_223965020.1;Parent=gene-LDO45_RS29745;Dbxref=GenBank:WP_223965020.1;Name=WP_223965020.1;end_range=86697,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398587.1;locus_tag=LDO45_RS29745;partial=true;product=LysR family transcriptional regulator;protein_id=WP_223965020.1;transl_table=11 ##sequence-region NZ_CAJZAS010000229.1 1 48536 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000229.1 RefSeq region 1 48536 . + . ID=NZ_CAJZAS010000229.1:1..48536;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_71 NZ_CAJZAS010000229.1 RefSeq gene 361 531 . - . ID=gene-LDO45_RS29755;Name=LDO45_RS29755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29755;old_locus_tag=BDI4_710004 NZ_CAJZAS010000229.1 Protein Homology CDS 361 531 . - 0 ID=cds-WP_004186709.1;Parent=gene-LDO45_RS29755;Dbxref=GenBank:WP_004186709.1;Name=WP_004186709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013436118.1;locus_tag=LDO45_RS29755;product=rubredoxin;protein_id=WP_004186709.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 787 1653 . + . ID=gene-LDO45_RS29760;Name=LDO45_RS29760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29760;old_locus_tag=BDI4_710005 NZ_CAJZAS010000229.1 Protein Homology CDS 787 1653 . + 0 ID=cds-WP_223965021.1;Parent=gene-LDO45_RS29760;Dbxref=GenBank:WP_223965021.1;Name=WP_223965021.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753914.1;locus_tag=LDO45_RS29760;product=hydroxymethylpyrimidine/phosphomethylpyrimidine kinase;protein_id=WP_223965021.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 1832 3472 . - . ID=gene-LDO45_RS29765;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=LDO45_RS29765;old_locus_tag=BDI4_710006 NZ_CAJZAS010000229.1 Protein Homology CDS 1832 3472 . - 0 ID=cds-WP_059530405.1;Parent=gene-LDO45_RS29765;Dbxref=GenBank:WP_059530405.1;Name=WP_059530405.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753915.1;locus_tag=LDO45_RS29765;product=chaperonin GroEL;protein_id=WP_059530405.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 3519 3812 . - . ID=gene-LDO45_RS29770;Name=groES;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=LDO45_RS29770;old_locus_tag=BDI4_710007 NZ_CAJZAS010000229.1 Protein Homology CDS 3519 3812 . - 0 ID=cds-WP_004186661.1;Parent=gene-LDO45_RS29770;Dbxref=GenBank:WP_004186661.1;Name=WP_004186661.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=groES;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544732.1;locus_tag=LDO45_RS29770;product=co-chaperone GroES;protein_id=WP_004186661.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 4187 4696 . - . ID=gene-LDO45_RS29775;Name=LDO45_RS29775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29775;old_locus_tag=BDI4_710008 NZ_CAJZAS010000229.1 Protein Homology CDS 4187 4696 . - 0 ID=cds-WP_059530407.1;Parent=gene-LDO45_RS29775;Dbxref=GenBank:WP_059530407.1;Name=WP_059530407.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753916.1;locus_tag=LDO45_RS29775;product=SRPBCC family protein;protein_id=WP_059530407.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 4738 5370 . - . ID=gene-LDO45_RS29780;Name=LDO45_RS29780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29780;old_locus_tag=BDI4_710009 NZ_CAJZAS010000229.1 Protein Homology CDS 4738 5370 . - 0 ID=cds-WP_059530409.1;Parent=gene-LDO45_RS29780;Dbxref=GenBank:WP_059530409.1;Name=WP_059530409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897912.1;locus_tag=LDO45_RS29780;product=hypothetical protein;protein_id=WP_059530409.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 5367 5783 . - . ID=gene-LDO45_RS29785;Name=LDO45_RS29785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29785;old_locus_tag=BDI4_710010 NZ_CAJZAS010000229.1 Protein Homology CDS 5367 5783 . - 0 ID=cds-WP_223965022.1;Parent=gene-LDO45_RS29785;Dbxref=GenBank:WP_223965022.1;Name=WP_223965022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656113.1;locus_tag=LDO45_RS29785;product=quinol oxidase;protein_id=WP_223965022.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 5812 6600 . - . ID=gene-LDO45_RS29790;Name=LDO45_RS29790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29790;old_locus_tag=BDI4_710011 NZ_CAJZAS010000229.1 Protein Homology CDS 5812 6600 . - 0 ID=cds-WP_059690724.1;Parent=gene-LDO45_RS29790;Dbxref=GenBank:WP_059690724.1;Name=WP_059690724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351126.1;locus_tag=LDO45_RS29790;product=anti-sigma factor;protein_id=WP_059690724.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 6600 7115 . - . ID=gene-LDO45_RS29795;Name=LDO45_RS29795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29795;old_locus_tag=BDI4_710012 NZ_CAJZAS010000229.1 Protein Homology CDS 6600 7115 . - 0 ID=cds-WP_059507036.1;Parent=gene-LDO45_RS29795;Dbxref=GenBank:WP_059507036.1;Name=WP_059507036.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400979.1;locus_tag=LDO45_RS29795;product=sigma-70 family RNA polymerase sigma factor;protein_id=WP_059507036.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 7162 7521 . - . ID=gene-LDO45_RS29800;Name=LDO45_RS29800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29800;old_locus_tag=BDI4_710013 NZ_CAJZAS010000229.1 Protein Homology CDS 7162 7521 . - 0 ID=cds-WP_059530421.1;Parent=gene-LDO45_RS29800;Dbxref=GenBank:WP_059530421.1;Name=WP_059530421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544726.1;locus_tag=LDO45_RS29800;product=hypothetical protein;protein_id=WP_059530421.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq pseudogene 7799 10112 . - . ID=gene-LDO45_RS29805;Name=LDO45_RS29805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS29805;pseudo=true NZ_CAJZAS010000229.1 Protein Homology CDS 7799 10112 . - 0 ID=cds-LDO45_RS29805;Parent=gene-LDO45_RS29805;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897917.1;locus_tag=LDO45_RS29805;product=beta strand repeat-containing protein;pseudo=true;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 10599 11843 . - . ID=gene-LDO45_RS29810;Name=LDO45_RS29810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29810;old_locus_tag=BDI4_710017 NZ_CAJZAS010000229.1 Protein Homology CDS 10599 11843 . - 0 ID=cds-WP_059699354.1;Parent=gene-LDO45_RS29810;Dbxref=GenBank:WP_059699354.1;Name=WP_059699354.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759594.1;locus_tag=LDO45_RS29810;product=FAD-binding oxidoreductase;protein_id=WP_059699354.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 11911 12690 . - . ID=gene-LDO45_RS29815;Name=LDO45_RS29815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29815;old_locus_tag=BDI4_710018 NZ_CAJZAS010000229.1 Protein Homology CDS 11911 12690 . - 0 ID=cds-WP_059530430.1;Parent=gene-LDO45_RS29815;Dbxref=GenBank:WP_059530430.1;Name=WP_059530430.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363209.1;locus_tag=LDO45_RS29815;product=ABC transporter substrate-binding protein;protein_id=WP_059530430.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq pseudogene 13024 14049 . + . ID=gene-LDO45_RS29820;Name=LDO45_RS29820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS29820;pseudo=true NZ_CAJZAS010000229.1 Protein Homology CDS 13024 14049 . + 0 ID=cds-LDO45_RS29820;Parent=gene-LDO45_RS29820;Note=too many ambiguous residues;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214008.1;locus_tag=LDO45_RS29820;product=ornithine cyclodeaminase family protein;pseudo=true;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 14046 14840 . + . ID=gene-LDO45_RS29825;Name=LDO45_RS29825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29825;old_locus_tag=BDI4_710020 NZ_CAJZAS010000229.1 Protein Homology CDS 14046 14840 . + 0 ID=cds-WP_290371045.1;Parent=gene-LDO45_RS29825;Dbxref=GenBank:WP_290371045.1;Name=WP_290371045.1;Ontology_term=GO:0003677,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,transcription regulator activity|0140110||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006406367.1;locus_tag=LDO45_RS29825;product=transcriptional regulator;protein_id=WP_290371045.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 15021 15755 . + . ID=gene-LDO45_RS29830;Name=LDO45_RS29830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29830;old_locus_tag=BDI4_710022 NZ_CAJZAS010000229.1 Protein Homology CDS 15021 15755 . + 0 ID=cds-WP_059699350.1;Parent=gene-LDO45_RS29830;Dbxref=GenBank:WP_059699350.1;Name=WP_059699350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363207.1;locus_tag=LDO45_RS29830;product=DsbA family oxidoreductase;protein_id=WP_059699350.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 15883 17322 . + . ID=gene-LDO45_RS29835;Name=LDO45_RS29835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29835;old_locus_tag=BDI4_710023 NZ_CAJZAS010000229.1 Protein Homology CDS 15883 17322 . + 0 ID=cds-WP_223965023.1;Parent=gene-LDO45_RS29835;Dbxref=GenBank:WP_223965023.1;Name=WP_223965023.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009889464.1;locus_tag=LDO45_RS29835;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_223965023.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 17602 18390 . + . ID=gene-LDO45_RS29840;Name=LDO45_RS29840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29840;old_locus_tag=BDI4_710024 NZ_CAJZAS010000229.1 Protein Homology CDS 17602 18390 . + 0 ID=cds-WP_059530551.1;Parent=gene-LDO45_RS29840;Dbxref=GenBank:WP_059530551.1;Name=WP_059530551.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544716.1;locus_tag=LDO45_RS29840;product=sulfite exporter TauE/SafE family protein;protein_id=WP_059530551.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 18547 20382 . - . ID=gene-LDO45_RS29845;Name=LDO45_RS29845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29845;old_locus_tag=BDI4_710025 NZ_CAJZAS010000229.1 Protein Homology CDS 18547 20382 . - 0 ID=cds-WP_223965024.1;Parent=gene-LDO45_RS29845;Dbxref=GenBank:WP_223965024.1;Name=WP_223965024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185580.1;locus_tag=LDO45_RS29845;product=S10 family peptidase;protein_id=WP_223965024.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 20995 23085 . - . ID=gene-LDO45_RS29850;Name=LDO45_RS29850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29850;old_locus_tag=BDI4_710028 NZ_CAJZAS010000229.1 Protein Homology CDS 20995 23085 . - 0 ID=cds-WP_223965025.1;Parent=gene-LDO45_RS29850;Dbxref=GenBank:WP_223965025.1;Name=WP_223965025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011807655.1;locus_tag=LDO45_RS29850;product=D-(-)-3-hydroxybutyrate oligomer hydrolase;protein_id=WP_223965025.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 23324 23689 . - . ID=gene-LDO45_RS29855;Name=LDO45_RS29855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29855;old_locus_tag=BDI4_710029 NZ_CAJZAS010000229.1 Protein Homology CDS 23324 23689 . - 0 ID=cds-WP_223965026.1;Parent=gene-LDO45_RS29855;Dbxref=GenBank:WP_223965026.1;Name=WP_223965026.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759602.1;locus_tag=LDO45_RS29855;product=BON domain-containing protein;protein_id=WP_223965026.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 24142 25596 . + . ID=gene-LDO45_RS29860;Name=LDO45_RS29860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29860;old_locus_tag=BDI4_710030 NZ_CAJZAS010000229.1 Protein Homology CDS 24142 25596 . + 0 ID=cds-WP_223965027.1;Parent=gene-LDO45_RS29860;Dbxref=GenBank:WP_223965027.1;Name=WP_223965027.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351112.1;locus_tag=LDO45_RS29860;product=TAXI family TRAP transporter solute-binding subunit;protein_id=WP_223965027.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 25704 26342 . + . ID=gene-LDO45_RS29865;Name=LDO45_RS29865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29865;old_locus_tag=BDI4_710031 NZ_CAJZAS010000229.1 Protein Homology CDS 25704 26342 . + 0 ID=cds-WP_059699332.1;Parent=gene-LDO45_RS29865;Dbxref=GenBank:WP_059699332.1;Name=WP_059699332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897929.1;locus_tag=LDO45_RS29865;product=2-hydroxychromene-2-carboxylate isomerase;protein_id=WP_059699332.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 26412 27359 . + . ID=gene-LDO45_RS29870;Name=LDO45_RS29870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29870;old_locus_tag=BDI4_710032 NZ_CAJZAS010000229.1 Protein Homology CDS 26412 27359 . + 0 ID=cds-WP_059530460.1;Parent=gene-LDO45_RS29870;Dbxref=GenBank:WP_059530460.1;Name=WP_059530460.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417109.1;locus_tag=LDO45_RS29870;product=LysR family transcriptional regulator;protein_id=WP_059530460.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 27403 27804 . - . ID=gene-LDO45_RS29875;Name=LDO45_RS29875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29875;old_locus_tag=BDI4_710033 NZ_CAJZAS010000229.1 Protein Homology CDS 27403 27804 . - 0 ID=cds-WP_223965028.1;Parent=gene-LDO45_RS29875;Dbxref=GenBank:WP_223965028.1;Name=WP_223965028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656100.1;locus_tag=LDO45_RS29875;product=polyketide cyclase;protein_id=WP_223965028.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 27913 28590 . - . ID=gene-LDO45_RS29880;Name=xdhC;gbkey=Gene;gene=xdhC;gene_biotype=protein_coding;locus_tag=LDO45_RS29880;old_locus_tag=BDI4_710034 NZ_CAJZAS010000229.1 Protein Homology CDS 27913 28590 . - 0 ID=cds-WP_223965029.1;Parent=gene-LDO45_RS29880;Dbxref=GenBank:WP_223965029.1;Name=WP_223965029.1;Ontology_term=GO:0009115,GO:0065003,GO:0043546;gbkey=CDS;gene=xdhC;go_function=molybdopterin cofactor binding|0043546||IEA;go_process=xanthine catabolic process|0009115||IEA,protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759402.1;locus_tag=LDO45_RS29880;product=xanthine dehydrogenase accessory protein XdhC;protein_id=WP_223965029.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 28592 30955 . - . ID=gene-LDO45_RS29885;Name=xdhB;gbkey=Gene;gene=xdhB;gene_biotype=protein_coding;locus_tag=LDO45_RS29885;old_locus_tag=BDI4_710035 NZ_CAJZAS010000229.1 Protein Homology CDS 28592 30955 . - 0 ID=cds-WP_223965030.1;Parent=gene-LDO45_RS29885;Dbxref=GenBank:WP_223965030.1;Name=WP_223965030.1;Ontology_term=GO:0009115,GO:0004854,GO:0030151;gbkey=CDS;gene=xdhB;go_function=xanthine dehydrogenase activity|0004854||IEA,molybdenum ion binding|0030151||IEA;go_process=xanthine catabolic process|0009115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883458.1;locus_tag=LDO45_RS29885;product=xanthine dehydrogenase molybdopterin binding subunit;protein_id=WP_223965030.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 30974 32533 . - . ID=gene-LDO45_RS29890;Name=xdhA;gbkey=Gene;gene=xdhA;gene_biotype=protein_coding;locus_tag=LDO45_RS29890;old_locus_tag=BDI4_710036 NZ_CAJZAS010000229.1 Protein Homology CDS 30974 32533 . - 0 ID=cds-WP_223965031.1;Parent=gene-LDO45_RS29890;Dbxref=GenBank:WP_223965031.1;Name=WP_223965031.1;Ontology_term=GO:0009115,GO:0004854,GO:0050660;gbkey=CDS;gene=xdhA;go_function=xanthine dehydrogenase activity|0004854||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=xanthine catabolic process|0009115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544704.1;locus_tag=LDO45_RS29890;product=xanthine dehydrogenase small subunit;protein_id=WP_223965031.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 32883 34097 . + . ID=gene-LDO45_RS29895;Name=LDO45_RS29895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29895;old_locus_tag=BDI4_710037 NZ_CAJZAS010000229.1 Protein Homology CDS 32883 34097 . + 0 ID=cds-WP_059690711.1;Parent=gene-LDO45_RS29895;Dbxref=GenBank:WP_059690711.1;Name=WP_059690711.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484942.1;locus_tag=LDO45_RS29895;product=MFS transporter;protein_id=WP_059690711.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 34210 35100 . - . ID=gene-LDO45_RS29900;Name=LDO45_RS29900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29900;old_locus_tag=BDI4_710039 NZ_CAJZAS010000229.1 Protein Homology CDS 34210 35100 . - 0 ID=cds-WP_223965032.1;Parent=gene-LDO45_RS29900;Dbxref=GenBank:WP_223965032.1;Name=WP_223965032.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544702.1;locus_tag=LDO45_RS29900;product=DMT family transporter;protein_id=WP_223965032.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 35234 36169 . + . ID=gene-LDO45_RS29905;Name=LDO45_RS29905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29905;old_locus_tag=BDI4_710040 NZ_CAJZAS010000229.1 Protein Homology CDS 35234 36169 . + 0 ID=cds-WP_223965033.1;Parent=gene-LDO45_RS29905;Dbxref=GenBank:WP_223965033.1;Name=WP_223965033.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752396.1;locus_tag=LDO45_RS29905;product=AraC family transcriptional regulator;protein_id=WP_223965033.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 36242 37453 . - . ID=gene-LDO45_RS29910;Name=LDO45_RS29910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29910;old_locus_tag=BDI4_710041 NZ_CAJZAS010000229.1 Protein Homology CDS 36242 37453 . - 0 ID=cds-WP_059530482.1;Parent=gene-LDO45_RS29910;Dbxref=GenBank:WP_059530482.1;Name=WP_059530482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722525.1;locus_tag=LDO45_RS29910;product=alanine--glyoxylate aminotransferase family protein;protein_id=WP_059530482.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 37887 38210 . - . ID=gene-LDO45_RS29915;Name=LDO45_RS29915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29915;old_locus_tag=BDI4_710044 NZ_CAJZAS010000229.1 GeneMarkS-2+ CDS 37887 38210 . - 0 ID=cds-WP_223965034.1;Parent=gene-LDO45_RS29915;Dbxref=GenBank:WP_223965034.1;Name=WP_223965034.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS29915;product=hypothetical protein;protein_id=WP_223965034.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 38209 39195 . + . ID=gene-LDO45_RS29920;Name=LDO45_RS29920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29920;old_locus_tag=BDI4_710045 NZ_CAJZAS010000229.1 Protein Homology CDS 38209 39195 . + 0 ID=cds-WP_223965035.1;Parent=gene-LDO45_RS29920;Dbxref=GenBank:WP_223965035.1;Name=WP_223965035.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752394.1;locus_tag=LDO45_RS29920;product=LysR family transcriptional regulator;protein_id=WP_223965035.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 39226 40224 . + . ID=gene-LDO45_RS29925;Name=LDO45_RS29925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29925;old_locus_tag=BDI4_710046 NZ_CAJZAS010000229.1 Protein Homology CDS 39226 40224 . + 0 ID=cds-WP_223965036.1;Parent=gene-LDO45_RS29925;Dbxref=GenBank:WP_223965036.1;Name=WP_223965036.1;Ontology_term=GO:0008720,GO:0070404;gbkey=CDS;go_function=D-lactate dehydrogenase activity|0008720||IEA,NADH binding|0070404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496703.1;locus_tag=LDO45_RS29925;product=2-hydroxyacid dehydrogenase;protein_id=WP_223965036.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 40344 41123 . + . ID=gene-LDO45_RS29930;Name=bluB;gbkey=Gene;gene=bluB;gene_biotype=protein_coding;locus_tag=LDO45_RS29930;old_locus_tag=BDI4_710047 NZ_CAJZAS010000229.1 Protein Homology CDS 40344 41123 . + 0 ID=cds-WP_223965039.1;Parent=gene-LDO45_RS29930;Dbxref=GenBank:WP_223965039.1;Name=WP_223965039.1;Ontology_term=GO:0009236,GO:0032363,GO:0016722;gbkey=CDS;gene=bluB;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;go_process=cobalamin biosynthetic process|0009236||IEA,FMN catabolic process|0032363||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363194.1;locus_tag=LDO45_RS29930;product=5%2C6-dimethylbenzimidazole synthase;protein_id=WP_223965039.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 41387 42556 . + . ID=gene-LDO45_RS29935;Name=LDO45_RS29935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29935;old_locus_tag=BDI4_710048 NZ_CAJZAS010000229.1 Protein Homology CDS 41387 42556 . + 0 ID=cds-WP_059530493.1;Parent=gene-LDO45_RS29935;Dbxref=GenBank:WP_059530493.1;Name=WP_059530493.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544698.1;locus_tag=LDO45_RS29935;product=MFS transporter;protein_id=WP_059530493.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 42690 43850 . + . ID=gene-LDO45_RS29940;Name=LDO45_RS29940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29940;old_locus_tag=BDI4_710049 NZ_CAJZAS010000229.1 Protein Homology CDS 42690 43850 . + 0 ID=cds-WP_223965037.1;Parent=gene-LDO45_RS29940;Dbxref=GenBank:WP_223965037.1;Name=WP_223965037.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006765053.1;locus_tag=LDO45_RS29940;product=MFS transporter;protein_id=WP_223965037.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 44008 45312 . - . ID=gene-LDO45_RS29945;Name=fahA;gbkey=Gene;gene=fahA;gene_biotype=protein_coding;locus_tag=LDO45_RS29945;old_locus_tag=BDI4_710050 NZ_CAJZAS010000229.1 Protein Homology CDS 44008 45312 . - 0 ID=cds-WP_223965038.1;Parent=gene-LDO45_RS29945;Dbxref=GenBank:WP_223965038.1;Name=WP_223965038.1;Ontology_term=GO:0006559,GO:0006572,GO:0004334;gbkey=CDS;gene=fahA;go_function=fumarylacetoacetase activity|0004334||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694175.1;locus_tag=LDO45_RS29945;product=fumarylacetoacetase;protein_id=WP_223965038.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 45309 46643 . - . ID=gene-LDO45_RS29950;Name=hmgA;gbkey=Gene;gene=hmgA;gene_biotype=protein_coding;locus_tag=LDO45_RS29950;old_locus_tag=BDI4_710051 NZ_CAJZAS010000229.1 Protein Homology CDS 45309 46643 . - 0 ID=cds-WP_059690704.1;Parent=gene-LDO45_RS29950;Dbxref=GenBank:WP_059690704.1;Name=WP_059690704.1;Ontology_term=GO:0006559,GO:0006572,GO:0004411;gbkey=CDS;gene=hmgA;go_function=homogentisate 1%2C2-dioxygenase activity|0004411||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA,tyrosine catabolic process|0006572||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214028.1;locus_tag=LDO45_RS29950;product=homogentisate 1%2C2-dioxygenase;protein_id=WP_059690704.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 46659 48020 . - . ID=gene-LDO45_RS29955;Name=LDO45_RS29955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29955;old_locus_tag=BDI4_710052 NZ_CAJZAS010000229.1 Protein Homology CDS 46659 48020 . - 0 ID=cds-WP_059530505.1;Parent=gene-LDO45_RS29955;Dbxref=GenBank:WP_059530505.1;Name=WP_059530505.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722516.1;locus_tag=LDO45_RS29955;product=MFS transporter;protein_id=WP_059530505.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq gene 48017 48247 . - . ID=gene-LDO45_RS29960;Name=LDO45_RS29960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29960;old_locus_tag=BDI4_710053 NZ_CAJZAS010000229.1 Protein Homology CDS 48017 48247 . - 0 ID=cds-WP_014897947.1;Parent=gene-LDO45_RS29960;Dbxref=GenBank:WP_014897947.1;Name=WP_014897947.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476783.1;locus_tag=LDO45_RS29960;product=DUF2783 domain-containing protein;protein_id=WP_014897947.1;transl_table=11 NZ_CAJZAS010000229.1 RefSeq pseudogene 48277 48536 . - . ID=gene-LDO45_RS29965;Name=LDO45_RS29965;end_range=48536,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS29965;old_locus_tag=BDI4_710054;partial=true;pseudo=true NZ_CAJZAS010000229.1 Protein Homology CDS 48277 48536 . - 2 ID=cds-LDO45_RS29965;Parent=gene-LDO45_RS29965;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=48536,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484900.1;locus_tag=LDO45_RS29965;partial=true;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000230.1 1 52736 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000230.1 RefSeq region 1 52736 . + . ID=NZ_CAJZAS010000230.1:1..52736;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_72 NZ_CAJZAS010000230.1 RefSeq gene 126 1685 . - . ID=gene-LDO45_RS29970;Name=LDO45_RS29970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29970;old_locus_tag=BDI4_720001 NZ_CAJZAS010000230.1 Protein Homology CDS 126 1685 . - 0 ID=cds-WP_057924316.1;Parent=gene-LDO45_RS29970;Dbxref=GenBank:WP_057924316.1;Name=WP_057924316.1;Ontology_term=GO:0006855,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492561.1;locus_tag=LDO45_RS29970;product=DHA2 family efflux MFS transporter permease subunit;protein_id=WP_057924316.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 1712 2929 . - . ID=gene-LDO45_RS29975;Name=LDO45_RS29975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29975;old_locus_tag=BDI4_720002 NZ_CAJZAS010000230.1 Protein Homology CDS 1712 2929 . - 0 ID=cds-WP_059701462.1;Parent=gene-LDO45_RS29975;Dbxref=GenBank:WP_059701462.1;Name=WP_059701462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011205096.1;locus_tag=LDO45_RS29975;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_059701462.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 2982 4478 . - . ID=gene-LDO45_RS29980;Name=LDO45_RS29980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29980;old_locus_tag=BDI4_720003 NZ_CAJZAS010000230.1 Protein Homology CDS 2982 4478 . - 0 ID=cds-WP_059691811.1;Parent=gene-LDO45_RS29980;Dbxref=GenBank:WP_059691811.1;Name=WP_059691811.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363745.1;locus_tag=LDO45_RS29980;product=efflux transporter outer membrane subunit;protein_id=WP_059691811.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 4566 5057 . - . ID=gene-LDO45_RS29985;Name=LDO45_RS29985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29985;old_locus_tag=BDI4_720004 NZ_CAJZAS010000230.1 Protein Homology CDS 4566 5057 . - 0 ID=cds-WP_059691810.1;Parent=gene-LDO45_RS29985;Dbxref=GenBank:WP_059691810.1;Name=WP_059691810.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351804.1;locus_tag=LDO45_RS29985;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_059691810.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 5404 7230 . + . ID=gene-LDO45_RS29990;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=LDO45_RS29990;old_locus_tag=BDI4_720006 NZ_CAJZAS010000230.1 Protein Homology CDS 5404 7230 . + 0 ID=cds-WP_059533039.1;Parent=gene-LDO45_RS29990;Dbxref=GenBank:WP_059533039.1;Name=WP_059533039.1;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013588059.1;locus_tag=LDO45_RS29990;product=translational GTPase TypA;protein_id=WP_059533039.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 7548 10412 . + . ID=gene-LDO45_RS29995;Name=LDO45_RS29995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS29995;old_locus_tag=BDI4_720008 NZ_CAJZAS010000230.1 Protein Homology CDS 7548 10412 . + 0 ID=cds-WP_059533036.1;Parent=gene-LDO45_RS29995;Dbxref=GenBank:WP_059533036.1;Name=WP_059533036.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526855.1;locus_tag=LDO45_RS29995;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_059533036.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 10549 11826 . + . ID=gene-LDO45_RS30000;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=LDO45_RS30000;old_locus_tag=BDI4_720009 NZ_CAJZAS010000230.1 Protein Homology CDS 10549 11826 . + 0 ID=cds-WP_059691809.1;Parent=gene-LDO45_RS30000;Dbxref=GenBank:WP_059691809.1;Name=WP_059691809.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601426.1;locus_tag=LDO45_RS30000;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_059691809.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 11908 13338 . + . ID=gene-LDO45_RS30005;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=LDO45_RS30005;old_locus_tag=BDI4_720010 NZ_CAJZAS010000230.1 Protein Homology CDS 11908 13338 . + 0 ID=cds-WP_223965040.1;Parent=gene-LDO45_RS30005;Dbxref=GenBank:WP_223965040.1;Name=WP_223965040.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884605.1;locus_tag=LDO45_RS30005;product=dihydrolipoyl dehydrogenase;protein_id=WP_223965040.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 13437 14534 . + . ID=gene-LDO45_RS30010;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=LDO45_RS30010;old_locus_tag=BDI4_720011 NZ_CAJZAS010000230.1 Protein Homology CDS 13437 14534 . + 0 ID=cds-WP_059533030.1;Parent=gene-LDO45_RS30010;Dbxref=GenBank:WP_059533030.1;Name=WP_059533030.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011402415.1;locus_tag=LDO45_RS30010;product=cell division protein ZapE;protein_id=WP_059533030.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 14679 15089 . + . ID=gene-LDO45_RS30015;Name=LDO45_RS30015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30015;old_locus_tag=BDI4_720012 NZ_CAJZAS010000230.1 Protein Homology CDS 14679 15089 . + 0 ID=cds-WP_059691808.1;Parent=gene-LDO45_RS30015;Dbxref=GenBank:WP_059691808.1;Name=WP_059691808.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024736.5;locus_tag=LDO45_RS30015;product=transposase;protein_id=WP_059691808.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 15192 15653 . - . ID=gene-LDO45_RS30020;Name=LDO45_RS30020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30020;old_locus_tag=BDI4_720013 NZ_CAJZAS010000230.1 Protein Homology CDS 15192 15653 . - 0 ID=cds-WP_059533024.1;Parent=gene-LDO45_RS30020;Dbxref=GenBank:WP_059533024.1;Name=WP_059533024.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526860.1;locus_tag=LDO45_RS30020;product=DUF2147 domain-containing protein;protein_id=WP_059533024.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 15820 17505 . - . ID=gene-LDO45_RS30025;Name=LDO45_RS30025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30025;old_locus_tag=BDI4_720014 NZ_CAJZAS010000230.1 Protein Homology CDS 15820 17505 . - 0 ID=cds-WP_059533021.1;Parent=gene-LDO45_RS30025;Dbxref=GenBank:WP_059533021.1;Name=WP_059533021.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363752.1;locus_tag=LDO45_RS30025;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_059533021.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 17651 19000 . - . ID=gene-LDO45_RS30030;Name=LDO45_RS30030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30030;old_locus_tag=BDI4_720016 NZ_CAJZAS010000230.1 Protein Homology CDS 17651 19000 . - 0 ID=cds-WP_223965041.1;Parent=gene-LDO45_RS30030;Dbxref=GenBank:WP_223965041.1;Name=WP_223965041.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400310.1;locus_tag=LDO45_RS30030;product=collagen-like triple helix repeat-containing protein;protein_id=WP_223965041.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 19041 20651 . - . ID=gene-LDO45_RS30035;Name=LDO45_RS30035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30035;old_locus_tag=BDI4_720017 NZ_CAJZAS010000230.1 Protein Homology CDS 19041 20651 . - 0 ID=cds-WP_223965042.1;Parent=gene-LDO45_RS30035;Dbxref=GenBank:WP_223965042.1;Name=WP_223965042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897202.1;locus_tag=LDO45_RS30035;product=collagen-like triple helix repeat-containing protein;protein_id=WP_223965042.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 21319 21525 . + . ID=gene-LDO45_RS30040;Name=LDO45_RS30040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30040;old_locus_tag=BDI4_720020 NZ_CAJZAS010000230.1 Protein Homology CDS 21319 21525 . + 0 ID=cds-WP_059533012.1;Parent=gene-LDO45_RS30040;Dbxref=GenBank:WP_059533012.1;Name=WP_059533012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722941.1;locus_tag=LDO45_RS30040;product=Flp family type IVb pilin;protein_id=WP_059533012.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 21613 22113 . + . ID=gene-LDO45_RS30045;Name=LDO45_RS30045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30045;old_locus_tag=BDI4_720021 NZ_CAJZAS010000230.1 Protein Homology CDS 21613 22113 . + 0 ID=cds-WP_059701449.1;Parent=gene-LDO45_RS30045;Dbxref=GenBank:WP_059701449.1;Name=WP_059701449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884613.1;locus_tag=LDO45_RS30045;product=prepilin peptidase;protein_id=WP_059701449.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 22110 22553 . + . ID=gene-LDO45_RS30050;Name=LDO45_RS30050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30050;old_locus_tag=BDI4_720022 NZ_CAJZAS010000230.1 Protein Homology CDS 22110 22553 . + 0 ID=cds-WP_223965043.1;Parent=gene-LDO45_RS30050;Dbxref=GenBank:WP_223965043.1;Name=WP_223965043.1;Ontology_term=GO:0009297;gbkey=CDS;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414068.1;locus_tag=LDO45_RS30050;product=TadE/TadG family type IV pilus assembly protein;protein_id=WP_223965043.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 22643 23584 . + . ID=gene-LDO45_RS30055;Name=cpaB;gbkey=Gene;gene=cpaB;gene_biotype=protein_coding;locus_tag=LDO45_RS30055;old_locus_tag=BDI4_720023 NZ_CAJZAS010000230.1 Protein Homology CDS 22643 23584 . + 0 ID=cds-WP_223965044.1;Parent=gene-LDO45_RS30055;Dbxref=GenBank:WP_223965044.1;Name=WP_223965044.1;gbkey=CDS;gene=cpaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006400303.1;locus_tag=LDO45_RS30055;product=Flp pilus assembly protein CpaB;protein_id=WP_223965044.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 23649 24980 . + . ID=gene-LDO45_RS30060;Name=LDO45_RS30060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30060;old_locus_tag=BDI4_720024 NZ_CAJZAS010000230.1 Protein Homology CDS 23649 24980 . + 0 ID=cds-WP_223965045.1;Parent=gene-LDO45_RS30060;Dbxref=GenBank:WP_223965045.1;Name=WP_223965045.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891455.1;locus_tag=LDO45_RS30060;product=type II and III secretion system protein family protein;protein_id=WP_223965045.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 25041 26315 . + . ID=gene-LDO45_RS30065;Name=LDO45_RS30065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30065;old_locus_tag=BDI4_720025 NZ_CAJZAS010000230.1 Protein Homology CDS 25041 26315 . + 0 ID=cds-WP_059533120.1;Parent=gene-LDO45_RS30065;Dbxref=GenBank:WP_059533120.1;Name=WP_059533120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891453.1;locus_tag=LDO45_RS30065;product=fimbrial protein;protein_id=WP_059533120.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 26319 27686 . + . ID=gene-LDO45_RS30070;Name=LDO45_RS30070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30070;old_locus_tag=BDI4_720026 NZ_CAJZAS010000230.1 Protein Homology CDS 26319 27686 . + 0 ID=cds-WP_059532996.1;Parent=gene-LDO45_RS30070;Dbxref=GenBank:WP_059532996.1;Name=WP_059532996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213456.1;locus_tag=LDO45_RS30070;product=CpaF family protein;protein_id=WP_059532996.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 27679 28671 . + . ID=gene-LDO45_RS30075;Name=LDO45_RS30075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30075;old_locus_tag=BDI4_720027 NZ_CAJZAS010000230.1 Protein Homology CDS 27679 28671 . + 0 ID=cds-WP_059691802.1;Parent=gene-LDO45_RS30075;Dbxref=GenBank:WP_059691802.1;Name=WP_059691802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004526866.1;locus_tag=LDO45_RS30075;product=type II secretion system F family protein;protein_id=WP_059691802.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 28676 29671 . + . ID=gene-LDO45_RS30080;Name=LDO45_RS30080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30080;old_locus_tag=BDI4_720028 NZ_CAJZAS010000230.1 Protein Homology CDS 28676 29671 . + 0 ID=cds-WP_223965046.1;Parent=gene-LDO45_RS30080;Dbxref=GenBank:WP_223965046.1;Name=WP_223965046.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897193.1;locus_tag=LDO45_RS30080;product=type II secretion system F family protein;protein_id=WP_223965046.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 29690 30532 . + . ID=gene-LDO45_RS30085;Name=LDO45_RS30085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30085;old_locus_tag=BDI4_720029 NZ_CAJZAS010000230.1 Protein Homology CDS 29690 30532 . + 0 ID=cds-WP_223965047.1;Parent=gene-LDO45_RS30085;Dbxref=GenBank:WP_223965047.1;Name=WP_223965047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897192.1;locus_tag=LDO45_RS30085;product=pilus assembly protein;protein_id=WP_223965047.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 30559 30885 . + . ID=gene-LDO45_RS30090;Name=LDO45_RS30090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30090;old_locus_tag=BDI4_720030 NZ_CAJZAS010000230.1 Protein Homology CDS 30559 30885 . + 0 ID=cds-WP_059818088.1;Parent=gene-LDO45_RS30090;Dbxref=GenBank:WP_059818088.1;Name=WP_059818088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884628.1;locus_tag=LDO45_RS30090;product=DUF3613 domain-containing protein;protein_id=WP_059818088.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 30897 32936 . + . ID=gene-LDO45_RS30095;Name=LDO45_RS30095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30095;old_locus_tag=BDI4_720031 NZ_CAJZAS010000230.1 Protein Homology CDS 30897 32936 . + 0 ID=cds-WP_223965048.1;Parent=gene-LDO45_RS30095;Dbxref=GenBank:WP_223965048.1;Name=WP_223965048.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416975.1;locus_tag=LDO45_RS30095;product=pilus assembly protein TadG-related protein;protein_id=WP_223965048.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 33047 34438 . + . ID=gene-LDO45_RS30100;Name=LDO45_RS30100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30100;old_locus_tag=BDI4_720032 NZ_CAJZAS010000230.1 Protein Homology CDS 33047 34438 . + 0 ID=cds-WP_223965049.1;Parent=gene-LDO45_RS30100;Dbxref=GenBank:WP_223965049.1;Name=WP_223965049.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026562.1;locus_tag=LDO45_RS30100;product=sigma 54-interacting transcriptional regulator;protein_id=WP_223965049.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 34494 35201 . + . ID=gene-LDO45_RS30105;Name=LDO45_RS30105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30105;old_locus_tag=BDI4_720033 NZ_CAJZAS010000230.1 Protein Homology CDS 34494 35201 . + 0 ID=cds-WP_059701437.1;Parent=gene-LDO45_RS30105;Dbxref=GenBank:WP_059701437.1;Name=WP_059701437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753912.1;locus_tag=LDO45_RS30105;product=DUF2968 domain-containing protein;protein_id=WP_059701437.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 35285 35878 . - . ID=gene-LDO45_RS30110;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=LDO45_RS30110;old_locus_tag=BDI4_720034 NZ_CAJZAS010000230.1 Protein Homology CDS 35285 35878 . - 0 ID=cds-WP_059701435.1;Parent=gene-LDO45_RS30110;Dbxref=GenBank:WP_059701435.1;Name=WP_059701435.1;Ontology_term=GO:0016070,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545286.1;locus_tag=LDO45_RS30110;product=RNA chaperone Hfq;protein_id=WP_059701435.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 36172 36453 . + . ID=gene-LDO45_RS30115;Name=LDO45_RS30115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30115;old_locus_tag=BDI4_720035 NZ_CAJZAS010000230.1 Protein Homology CDS 36172 36453 . + 0 ID=cds-WP_059533118.1;Parent=gene-LDO45_RS30115;Dbxref=GenBank:WP_059533118.1;Name=WP_059533118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600364.1;locus_tag=LDO45_RS30115;product=PXPV repeat protein;protein_id=WP_059533118.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 36481 37395 . - . ID=gene-LDO45_RS30120;Name=LDO45_RS30120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30120;old_locus_tag=BDI4_720036 NZ_CAJZAS010000230.1 Protein Homology CDS 36481 37395 . - 0 ID=cds-WP_223965050.1;Parent=gene-LDO45_RS30120;Dbxref=GenBank:WP_223965050.1;Name=WP_223965050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485282.1;locus_tag=LDO45_RS30120;product=DUF1571 domain-containing protein;protein_id=WP_223965050.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 37425 39179 . - . ID=gene-LDO45_RS30125;Name=LDO45_RS30125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30125;old_locus_tag=BDI4_720037 NZ_CAJZAS010000230.1 Protein Homology CDS 37425 39179 . - 0 ID=cds-WP_223965051.1;Parent=gene-LDO45_RS30125;Dbxref=GenBank:WP_223965051.1;Name=WP_223965051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363772.1;locus_tag=LDO45_RS30125;product=AMP-binding protein;protein_id=WP_223965051.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 39462 40280 . - . ID=gene-LDO45_RS30130;Name=LDO45_RS30130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30130;old_locus_tag=BDI4_720038 NZ_CAJZAS010000230.1 Protein Homology CDS 39462 40280 . - 0 ID=cds-WP_059532963.1;Parent=gene-LDO45_RS30130;Dbxref=GenBank:WP_059532963.1;Name=WP_059532963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495320.1;locus_tag=LDO45_RS30130;product=TetR/AcrR family transcriptional regulator;protein_id=WP_059532963.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 40498 41718 . - . ID=gene-LDO45_RS30135;Name=LDO45_RS30135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30135;old_locus_tag=BDI4_720039 NZ_CAJZAS010000230.1 Protein Homology CDS 40498 41718 . - 0 ID=cds-WP_059532960.1;Parent=gene-LDO45_RS30135;Dbxref=GenBank:WP_059532960.1;Name=WP_059532960.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545290.1;locus_tag=LDO45_RS30135;product=MFS transporter;protein_id=WP_059532960.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 42000 42542 . + . ID=gene-LDO45_RS30140;Name=LDO45_RS30140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30140;old_locus_tag=BDI4_720040 NZ_CAJZAS010000230.1 Protein Homology CDS 42000 42542 . + 0 ID=cds-WP_223965052.1;Parent=gene-LDO45_RS30140;Dbxref=GenBank:WP_223965052.1;Name=WP_223965052.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897181.1;locus_tag=LDO45_RS30140;product=GNAT family N-acetyltransferase;protein_id=WP_223965052.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 42658 43284 . + . ID=gene-LDO45_RS30145;Name=LDO45_RS30145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30145;old_locus_tag=BDI4_720041 NZ_CAJZAS010000230.1 Protein Homology CDS 42658 43284 . + 0 ID=cds-WP_223965053.1;Parent=gene-LDO45_RS30145;Dbxref=GenBank:WP_223965053.1;Name=WP_223965053.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006416550.1;locus_tag=LDO45_RS30145;product=ParB-like protein;protein_id=WP_223965053.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 43309 45036 . + . ID=gene-LDO45_RS30150;Name=LDO45_RS30150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30150;old_locus_tag=BDI4_720042 NZ_CAJZAS010000230.1 Protein Homology CDS 43309 45036 . + 0 ID=cds-WP_223965054.1;Parent=gene-LDO45_RS30150;Dbxref=GenBank:WP_223965054.1;Name=WP_223965054.1;Ontology_term=GO:0015103,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=inorganic anion transmembrane transporter activity|0015103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897179.1;locus_tag=LDO45_RS30150;product=SulP family inorganic anion transporter;protein_id=WP_223965054.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 45079 46029 . - . ID=gene-LDO45_RS30155;Name=LDO45_RS30155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30155;old_locus_tag=BDI4_720043 NZ_CAJZAS010000230.1 Protein Homology CDS 45079 46029 . - 0 ID=cds-WP_223965055.1;Parent=gene-LDO45_RS30155;Dbxref=GenBank:WP_223965055.1;Name=WP_223965055.1;Ontology_term=GO:0005975,GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363778.1;locus_tag=LDO45_RS30155;product=carbohydrate kinase;protein_id=WP_223965055.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 46166 47110 . - . ID=gene-LDO45_RS30160;Name=LDO45_RS30160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30160;old_locus_tag=BDI4_720044 NZ_CAJZAS010000230.1 Protein Homology CDS 46166 47110 . - 0 ID=cds-WP_059532945.1;Parent=gene-LDO45_RS30160;Dbxref=GenBank:WP_059532945.1;Name=WP_059532945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545295.1;locus_tag=LDO45_RS30160;product=ABC transporter substrate-binding protein;protein_id=WP_059532945.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 47197 48234 . - . ID=gene-LDO45_RS30165;Name=LDO45_RS30165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30165;old_locus_tag=BDI4_720045 NZ_CAJZAS010000230.1 Protein Homology CDS 47197 48234 . - 0 ID=cds-WP_059532942.1;Parent=gene-LDO45_RS30165;Dbxref=GenBank:WP_059532942.1;Name=WP_059532942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006410134.1;locus_tag=LDO45_RS30165;product=ribose ABC transporter permease;protein_id=WP_059532942.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 48275 49828 . - . ID=gene-LDO45_RS30170;Name=LDO45_RS30170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30170;old_locus_tag=BDI4_720046 NZ_CAJZAS010000230.1 Protein Homology CDS 48275 49828 . - 0 ID=cds-WP_059532939.1;Parent=gene-LDO45_RS30170;Dbxref=GenBank:WP_059532939.1;Name=WP_059532939.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545297.1;locus_tag=LDO45_RS30170;product=sugar ABC transporter ATP-binding protein;protein_id=WP_059532939.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 49815 51062 . - . ID=gene-LDO45_RS30175;Name=LDO45_RS30175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30175;old_locus_tag=BDI4_720047 NZ_CAJZAS010000230.1 Protein Homology CDS 49815 51062 . - 0 ID=cds-WP_059691837.1;Parent=gene-LDO45_RS30175;Dbxref=GenBank:WP_059691837.1;Name=WP_059691837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004554715.1;locus_tag=LDO45_RS30175;product=ROK family protein;protein_id=WP_059691837.1;transl_table=11 NZ_CAJZAS010000230.1 RefSeq gene 51386 51472 . - . ID=gene-LDO45_RS30180;Name=LDO45_RS30180;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS30180;old_locus_tag=BDI4_TRNA34 NZ_CAJZAS010000230.1 tRNAscan-SE tRNA 51386 51472 . - . ID=rna-LDO45_RS30180;Parent=gene-LDO45_RS30180;anticodon=(pos:complement(51436..51438));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS30180;product=tRNA-Leu NZ_CAJZAS010000230.1 tRNAscan-SE exon 51386 51472 . - . ID=exon-LDO45_RS30180-1;Parent=rna-LDO45_RS30180;anticodon=(pos:complement(51436..51438));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS30180;product=tRNA-Leu NZ_CAJZAS010000230.1 RefSeq gene 51906 52469 . + . ID=gene-LDO45_RS30185;Name=LDO45_RS30185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30185;old_locus_tag=BDI4_720050 NZ_CAJZAS010000230.1 Protein Homology CDS 51906 52469 . + 0 ID=cds-WP_059532936.1;Parent=gene-LDO45_RS30185;Dbxref=GenBank:WP_059532936.1;Name=WP_059532936.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404915.1;locus_tag=LDO45_RS30185;product=flavodoxin family protein;protein_id=WP_059532936.1;transl_table=11 ##sequence-region NZ_CAJZAS010000231.1 1 64786 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000231.1 RefSeq region 1 64786 . + . ID=NZ_CAJZAS010000231.1:1..64786;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_73 NZ_CAJZAS010000231.1 RefSeq pseudogene 1 350 . - . ID=gene-LDO45_RS30190;Name=LDO45_RS30190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS30190;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000231.1 Protein Homology CDS 1 350 . - 0 ID=cds-LDO45_RS30190;Parent=gene-LDO45_RS30190;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657369.1;locus_tag=LDO45_RS30190;partial=true;product=regulator;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 503 1756 . + . ID=gene-LDO45_RS30195;Name=LDO45_RS30195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30195;old_locus_tag=BDI4_730002 NZ_CAJZAS010000231.1 Protein Homology CDS 503 1756 . + 0 ID=cds-WP_059535838.1;Parent=gene-LDO45_RS30195;Dbxref=GenBank:WP_059535838.1;Name=WP_059535838.1;Ontology_term=GO:0042953,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532144.1;locus_tag=LDO45_RS30195;product=lipoprotein-releasing ABC transporter permease subunit;protein_id=WP_059535838.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 1812 2507 . + . ID=gene-LDO45_RS30200;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=LDO45_RS30200;old_locus_tag=BDI4_730003 NZ_CAJZAS010000231.1 Protein Homology CDS 1812 2507 . + 0 ID=cds-WP_059450449.1;Parent=gene-LDO45_RS30200;Dbxref=GenBank:WP_059450449.1;Name=WP_059450449.1;Ontology_term=GO:0042953,GO:0005524,GO:0043190;gbkey=CDS;gene=lolD;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755309.1;locus_tag=LDO45_RS30200;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_059450449.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 2572 3360 . + . ID=gene-LDO45_RS30205;Name=LDO45_RS30205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30205;old_locus_tag=BDI4_730005 NZ_CAJZAS010000231.1 Protein Homology CDS 2572 3360 . + 0 ID=cds-WP_059690945.1;Parent=gene-LDO45_RS30205;Dbxref=GenBank:WP_059690945.1;Name=WP_059690945.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010104958.1;locus_tag=LDO45_RS30205;product=TatD family hydrolase;protein_id=WP_059690945.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 3415 5907 . + . ID=gene-LDO45_RS30210;Name=LDO45_RS30210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30210;old_locus_tag=BDI4_730006 NZ_CAJZAS010000231.1 Protein Homology CDS 3415 5907 . + 0 ID=cds-WP_223965056.1;Parent=gene-LDO45_RS30210;Dbxref=GenBank:WP_223965056.1;Name=WP_223965056.1;Ontology_term=GO:0009290,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328814.1;locus_tag=LDO45_RS30210;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_223965056.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 6042 6887 . + . ID=gene-LDO45_RS30215;Name=LDO45_RS30215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30215;old_locus_tag=BDI4_730007 NZ_CAJZAS010000231.1 Protein Homology CDS 6042 6887 . + 0 ID=cds-WP_059535830.1;Parent=gene-LDO45_RS30215;Dbxref=GenBank:WP_059535830.1;Name=WP_059535830.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328813.1;locus_tag=LDO45_RS30215;product=alpha/beta fold hydrolase;protein_id=WP_059535830.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 7062 8720 . + . ID=gene-LDO45_RS30220;Name=LDO45_RS30220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30220;old_locus_tag=BDI4_730008 NZ_CAJZAS010000231.1 Protein Homology CDS 7062 8720 . + 0 ID=cds-WP_059690943.1;Parent=gene-LDO45_RS30220;Dbxref=GenBank:WP_059690943.1;Name=WP_059690943.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401937.1;locus_tag=LDO45_RS30220;product=CTP synthase;protein_id=WP_059690943.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 8717 9571 . + . ID=gene-LDO45_RS30225;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=LDO45_RS30225;old_locus_tag=BDI4_730009 NZ_CAJZAS010000231.1 Protein Homology CDS 8717 9571 . + 0 ID=cds-WP_014896643.1;Parent=gene-LDO45_RS30225;Dbxref=GenBank:WP_014896643.1;Name=WP_014896643.1;Ontology_term=GO:0009058,GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364209.1;locus_tag=LDO45_RS30225;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_014896643.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 9678 10961 . + . ID=gene-LDO45_RS30230;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=LDO45_RS30230;old_locus_tag=BDI4_730010 NZ_CAJZAS010000231.1 Protein Homology CDS 9678 10961 . + 0 ID=cds-WP_011885396.1;Parent=gene-LDO45_RS30230;Dbxref=GenBank:WP_011885396.1;Name=WP_011885396.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011001079.1;locus_tag=LDO45_RS30230;product=phosphopyruvate hydratase;protein_id=WP_011885396.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 11044 11469 . + . ID=gene-LDO45_RS30235;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=LDO45_RS30235;old_locus_tag=BDI4_730011 NZ_CAJZAS010000231.1 Protein Homology CDS 11044 11469 . + 0 ID=cds-WP_059535825.1;Parent=gene-LDO45_RS30235;Dbxref=GenBank:WP_059535825.1;Name=WP_059535825.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401934.1;locus_tag=LDO45_RS30235;product=cell division protein FtsB;protein_id=WP_059535825.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 11564 11923 . - . ID=gene-LDO45_RS30240;Name=LDO45_RS30240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30240;old_locus_tag=BDI4_730012 NZ_CAJZAS010000231.1 Protein Homology CDS 11564 11923 . - 0 ID=cds-WP_059535824.1;Parent=gene-LDO45_RS30240;Dbxref=GenBank:WP_059535824.1;Name=WP_059535824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401933.1;locus_tag=LDO45_RS30240;product=hypothetical protein;protein_id=WP_059535824.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 12062 13012 . - . ID=gene-LDO45_RS30245;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=LDO45_RS30245;old_locus_tag=BDI4_730013 NZ_CAJZAS010000231.1 Protein Homology CDS 12062 13012 . - 0 ID=cds-WP_059535822.1;Parent=gene-LDO45_RS30245;Dbxref=GenBank:WP_059535822.1;Name=WP_059535822.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213089.1;locus_tag=LDO45_RS30245;product=Hsp33 family molecular chaperone HslO;protein_id=WP_059535822.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 13038 13562 . - . ID=gene-LDO45_RS30250;Name=LDO45_RS30250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30250;old_locus_tag=BDI4_730014 NZ_CAJZAS010000231.1 Protein Homology CDS 13038 13562 . - 0 ID=cds-WP_223965057.1;Parent=gene-LDO45_RS30250;Dbxref=GenBank:WP_223965057.1;Name=WP_223965057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890200.1;locus_tag=LDO45_RS30250;product=gamma carbonic anhydrase family protein;protein_id=WP_223965057.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 13707 14564 . + . ID=gene-LDO45_RS30255;Name=LDO45_RS30255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30255;old_locus_tag=BDI4_730015 NZ_CAJZAS010000231.1 Protein Homology CDS 13707 14564 . + 0 ID=cds-WP_223965076.1;Parent=gene-LDO45_RS30255;Dbxref=GenBank:WP_223965076.1;Name=WP_223965076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896648.1;locus_tag=LDO45_RS30255;product=ferritin-like domain-containing protein;protein_id=WP_223965076.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 14764 15654 . + . ID=gene-LDO45_RS30260;Name=LDO45_RS30260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30260;old_locus_tag=BDI4_730016 NZ_CAJZAS010000231.1 Protein Homology CDS 14764 15654 . + 0 ID=cds-WP_059535816.1;Parent=gene-LDO45_RS30260;Dbxref=GenBank:WP_059535816.1;Name=WP_059535816.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364204.1;locus_tag=LDO45_RS30260;product=alpha/beta fold hydrolase;protein_id=WP_059535816.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 15737 16567 . + . ID=gene-LDO45_RS30265;Name=LDO45_RS30265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30265;old_locus_tag=BDI4_730017 NZ_CAJZAS010000231.1 Protein Homology CDS 15737 16567 . + 0 ID=cds-WP_059535814.1;Parent=gene-LDO45_RS30265;Dbxref=GenBank:WP_059535814.1;Name=WP_059535814.1;Ontology_term=GO:0016311,GO:0097657;gbkey=CDS;go_function=3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723269.1;locus_tag=LDO45_RS30265;product=3'%2C5'-nucleoside bisphosphate phosphatase;protein_id=WP_059535814.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 16640 17272 . + . ID=gene-LDO45_RS30270;Name=LDO45_RS30270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30270;old_locus_tag=BDI4_730018 NZ_CAJZAS010000231.1 Protein Homology CDS 16640 17272 . + 0 ID=cds-WP_223965058.1;Parent=gene-LDO45_RS30270;Dbxref=GenBank:WP_223965058.1;Name=WP_223965058.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885388.1;locus_tag=LDO45_RS30270;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_223965058.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 17318 17980 . + . ID=gene-LDO45_RS30275;Name=LDO45_RS30275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30275;old_locus_tag=BDI4_730020 NZ_CAJZAS010000231.1 Protein Homology CDS 17318 17980 . + 0 ID=cds-WP_059690936.1;Parent=gene-LDO45_RS30275;Dbxref=GenBank:WP_059690936.1;Name=WP_059690936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009980725.1;locus_tag=LDO45_RS30275;product=site-2 protease family protein;protein_id=WP_059690936.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 17989 19191 . + . ID=gene-LDO45_RS30280;Name=LDO45_RS30280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30280;old_locus_tag=BDI4_730019 NZ_CAJZAS010000231.1 Protein Homology CDS 17989 19191 . + 0 ID=cds-WP_059690935.1;Parent=gene-LDO45_RS30280;Dbxref=GenBank:WP_059690935.1;Name=WP_059690935.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010104925.1;locus_tag=LDO45_RS30280;product=tryptophan--tRNA ligase;protein_id=WP_059690935.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 19201 19803 . + . ID=gene-LDO45_RS30285;Name=LDO45_RS30285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30285;old_locus_tag=BDI4_730021 NZ_CAJZAS010000231.1 Protein Homology CDS 19201 19803 . + 0 ID=cds-WP_223965059.1;Parent=gene-LDO45_RS30285;Dbxref=GenBank:WP_223965059.1;Name=WP_223965059.1;Ontology_term=GO:0006744,GO:0032259,GO:0008425,GO:0061542,GO:0102208;gbkey=CDS;go_function=2-polyprenyl-6-methoxy-1%2C4-benzoquinone methyltransferase activity|0008425||IEA,3-demethylubiquinol-n 3-O-methyltransferase activity|0061542||IEA,2-polyprenyl-6-hydroxyphenol methylase activity|0102208||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549480.1;locus_tag=LDO45_RS30285;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_223965059.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 19851 20753 . + . ID=gene-LDO45_RS30290;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=LDO45_RS30290;old_locus_tag=BDI4_730022 NZ_CAJZAS010000231.1 Protein Homology CDS 19851 20753 . + 0 ID=cds-WP_223965060.1;Parent=gene-LDO45_RS30290;Dbxref=GenBank:WP_223965060.1;Name=WP_223965060.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602151.1;locus_tag=LDO45_RS30290;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_223965060.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 20865 22010 . + . ID=gene-LDO45_RS30295;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=LDO45_RS30295;old_locus_tag=BDI4_730023 NZ_CAJZAS010000231.1 Protein Homology CDS 20865 22010 . + 0 ID=cds-WP_223965061.1;Parent=gene-LDO45_RS30295;Dbxref=GenBank:WP_223965061.1;Name=WP_223965061.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904698.1;locus_tag=LDO45_RS30295;product=outer membrane protein assembly factor BamC;protein_id=WP_223965061.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 22015 22791 . + . ID=gene-LDO45_RS30300;Name=LDO45_RS30300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30300;old_locus_tag=BDI4_730024 NZ_CAJZAS010000231.1 Protein Homology CDS 22015 22791 . + 0 ID=cds-WP_223965062.1;Parent=gene-LDO45_RS30300;Dbxref=GenBank:WP_223965062.1;Name=WP_223965062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408194.1;locus_tag=LDO45_RS30300;product=MBL fold metallo-hydrolase;protein_id=WP_223965062.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 22906 23088 . + . ID=gene-LDO45_RS30305;Name=LDO45_RS30305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30305;old_locus_tag=BDI4_730025 NZ_CAJZAS010000231.1 GeneMarkS-2+ CDS 22906 23088 . + 0 ID=cds-WP_162499716.1;Parent=gene-LDO45_RS30305;Dbxref=GenBank:WP_162499716.1;Name=WP_162499716.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS30305;product=hypothetical protein;protein_id=WP_162499716.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 23109 23354 . - . ID=gene-LDO45_RS34640;Name=LDO45_RS34640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34640 NZ_CAJZAS010000231.1 Protein Homology CDS 23109 23354 . - 0 ID=cds-WP_011657350.1;Parent=gene-LDO45_RS34640;Dbxref=GenBank:WP_011657350.1;Name=WP_011657350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657350.1;locus_tag=LDO45_RS34640;product=hypothetical protein;protein_id=WP_011657350.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 23409 24629 . - . ID=gene-LDO45_RS30310;Name=LDO45_RS30310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30310;old_locus_tag=BDI4_730026 NZ_CAJZAS010000231.1 Protein Homology CDS 23409 24629 . - 0 ID=cds-WP_223965063.1;Parent=gene-LDO45_RS30310;Dbxref=GenBank:WP_223965063.1;Name=WP_223965063.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761910.1;locus_tag=LDO45_RS30310;product=cupin domain-containing protein;protein_id=WP_223965063.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 24662 25204 . + . ID=gene-LDO45_RS30315;Name=LDO45_RS30315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30315;old_locus_tag=BDI4_730027 NZ_CAJZAS010000231.1 Protein Homology CDS 24662 25204 . + 0 ID=cds-WP_059535798.1;Parent=gene-LDO45_RS30315;Dbxref=GenBank:WP_059535798.1;Name=WP_059535798.1;Ontology_term=GO:0006457,GO:0003755,GO:0046872;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,metal ion binding|0046872||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006025990.1;locus_tag=LDO45_RS30315;product=peptidylprolyl isomerase;protein_id=WP_059535798.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 25184 26455 . - . ID=gene-LDO45_RS30320;Name=LDO45_RS30320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30320;old_locus_tag=BDI4_730028 NZ_CAJZAS010000231.1 Protein Homology CDS 25184 26455 . - 0 ID=cds-WP_223965064.1;Parent=gene-LDO45_RS30320;Dbxref=GenBank:WP_223965064.1;Name=WP_223965064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364197.1;locus_tag=LDO45_RS30320;product=hypothetical protein;protein_id=WP_223965064.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 26436 29093 . - . ID=gene-LDO45_RS30325;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=LDO45_RS30325;old_locus_tag=BDI4_730029 NZ_CAJZAS010000231.1 Protein Homology CDS 26436 29093 . - 0 ID=cds-WP_223965065.1;Parent=gene-LDO45_RS30325;Dbxref=GenBank:WP_223965065.1;Name=WP_223965065.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352525.1;locus_tag=LDO45_RS30325;product=DNA mismatch repair protein MutS;protein_id=WP_223965065.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 29544 30434 . + . ID=gene-LDO45_RS30330;Name=LDO45_RS30330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30330;old_locus_tag=BDI4_730031 NZ_CAJZAS010000231.1 Protein Homology CDS 29544 30434 . + 0 ID=cds-WP_059690928.1;Parent=gene-LDO45_RS30330;Dbxref=GenBank:WP_059690928.1;Name=WP_059690928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726062.1;locus_tag=LDO45_RS30330;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_059690928.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 30551 31456 . - . ID=gene-LDO45_RS30335;Name=LDO45_RS30335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30335;old_locus_tag=BDI4_730032 NZ_CAJZAS010000231.1 Protein Homology CDS 30551 31456 . - 0 ID=cds-WP_059690927.1;Parent=gene-LDO45_RS30335;Dbxref=GenBank:WP_059690927.1;Name=WP_059690927.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012337492.1;locus_tag=LDO45_RS30335;product=AraC family transcriptional regulator;protein_id=WP_059690927.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 31694 33316 . - . ID=gene-LDO45_RS30340;Name=LDO45_RS30340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30340;old_locus_tag=BDI4_730034 NZ_CAJZAS010000231.1 Protein Homology CDS 31694 33316 . - 0 ID=cds-WP_223965066.1;Parent=gene-LDO45_RS30340;Dbxref=GenBank:WP_223965066.1;Name=WP_223965066.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006483988.1;locus_tag=LDO45_RS30340;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_223965066.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 33427 34230 . - . ID=gene-LDO45_RS30345;Name=LDO45_RS30345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30345;old_locus_tag=BDI4_730035 NZ_CAJZAS010000231.1 Protein Homology CDS 33427 34230 . - 0 ID=cds-WP_059535783.1;Parent=gene-LDO45_RS30345;Dbxref=GenBank:WP_059535783.1;Name=WP_059535783.1;Ontology_term=GO:0006020,GO:0046855,GO:0008934,GO:0046872;gbkey=CDS;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA,metal ion binding|0046872||IEA;go_process=inositol metabolic process|0006020||IEA,obsolete inositol phosphate dephosphorylation|0046855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352522.1;locus_tag=LDO45_RS30345;product=inositol monophosphatase family protein;protein_id=WP_059535783.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 34510 35334 . + . ID=gene-LDO45_RS30350;Name=LDO45_RS30350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30350;old_locus_tag=BDI4_730037 NZ_CAJZAS010000231.1 Protein Homology CDS 34510 35334 . + 0 ID=cds-WP_059535781.1;Parent=gene-LDO45_RS30350;Dbxref=GenBank:WP_059535781.1;Name=WP_059535781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364188.1;locus_tag=LDO45_RS30350;product=RNA methyltransferase;protein_id=WP_059535781.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 35651 36424 . + . ID=gene-LDO45_RS30355;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=LDO45_RS30355;old_locus_tag=BDI4_730039 NZ_CAJZAS010000231.1 Protein Homology CDS 35651 36424 . + 0 ID=cds-WP_059510868.1;Parent=gene-LDO45_RS30355;Dbxref=GenBank:WP_059510868.1;Name=WP_059510868.1;Ontology_term=GO:0006535,GO:0009001,GO:0005737;gbkey=CDS;gene=cysE;go_component=cytoplasm|0005737||IEA;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723260.1;locus_tag=LDO45_RS30355;product=serine O-acetyltransferase;protein_id=WP_059510868.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 36464 37264 . - . ID=gene-LDO45_RS30360;Name=LDO45_RS30360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30360;old_locus_tag=BDI4_730040 NZ_CAJZAS010000231.1 Protein Homology CDS 36464 37264 . - 0 ID=cds-WP_059535778.1;Parent=gene-LDO45_RS30360;Dbxref=GenBank:WP_059535778.1;Name=WP_059535778.1;Ontology_term=GO:0009245,GO:0016462;gbkey=CDS;go_function=pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763970.1;locus_tag=LDO45_RS30360;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_059535778.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 37292 37783 . - . ID=gene-LDO45_RS30365;Name=LDO45_RS30365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30365;old_locus_tag=BDI4_730041 NZ_CAJZAS010000231.1 Protein Homology CDS 37292 37783 . - 0 ID=cds-WP_006483987.1;Parent=gene-LDO45_RS30365;Dbxref=GenBank:WP_006483987.1;Name=WP_006483987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016345694.1;locus_tag=LDO45_RS30365;product=peptidylprolyl isomerase;protein_id=WP_006483987.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 37872 38447 . - . ID=gene-LDO45_RS30370;Name=LDO45_RS30370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30370;old_locus_tag=BDI4_730042 NZ_CAJZAS010000231.1 Protein Homology CDS 37872 38447 . - 0 ID=cds-WP_012364186.1;Parent=gene-LDO45_RS30370;Dbxref=GenBank:WP_012364186.1;Name=WP_012364186.1;Ontology_term=GO:0000413,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein peptidyl-prolyl isomerization|0000413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364186.1;locus_tag=LDO45_RS30370;product=peptidylprolyl isomerase;protein_id=WP_012364186.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 38487 39209 . - . ID=gene-LDO45_RS30375;Name=LDO45_RS30375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30375;old_locus_tag=BDI4_730043 NZ_CAJZAS010000231.1 Protein Homology CDS 38487 39209 . - 0 ID=cds-WP_223965067.1;Parent=gene-LDO45_RS30375;Dbxref=GenBank:WP_223965067.1;Name=WP_223965067.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851871.1;locus_tag=LDO45_RS30375;product=tetratricopeptide repeat protein;protein_id=WP_223965067.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 39444 40841 . + . ID=gene-LDO45_RS30380;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=LDO45_RS30380;old_locus_tag=BDI4_730045 NZ_CAJZAS010000231.1 Protein Homology CDS 39444 40841 . + 0 ID=cds-WP_223965068.1;Parent=gene-LDO45_RS30380;Dbxref=GenBank:WP_223965068.1;Name=WP_223965068.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011488917.1;locus_tag=LDO45_RS30380;product=cysteine--tRNA ligase;protein_id=WP_223965068.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 40885 41754 . + . ID=gene-LDO45_RS30385;Name=LDO45_RS30385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30385;old_locus_tag=BDI4_730046 NZ_CAJZAS010000231.1 Protein Homology CDS 40885 41754 . + 0 ID=cds-WP_059702212.1;Parent=gene-LDO45_RS30385;Dbxref=GenBank:WP_059702212.1;Name=WP_059702212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885197.1;locus_tag=LDO45_RS30385;product=DNA-3-methyladenine glycosylase;protein_id=WP_059702212.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 41854 42825 . + . ID=gene-LDO45_RS30390;Name=LDO45_RS30390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30390;old_locus_tag=BDI4_730047 NZ_CAJZAS010000231.1 Protein Homology CDS 41854 42825 . + 0 ID=cds-WP_006478433.1;Parent=gene-LDO45_RS30390;Dbxref=GenBank:WP_006478433.1;Name=WP_006478433.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020065573.1;locus_tag=LDO45_RS30390;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=WP_006478433.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 42869 44275 . + . ID=gene-LDO45_RS30395;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=LDO45_RS30395;old_locus_tag=BDI4_730048 NZ_CAJZAS010000231.1 Protein Homology CDS 42869 44275 . + 0 ID=cds-WP_223965069.1;Parent=gene-LDO45_RS30395;Dbxref=GenBank:WP_223965069.1;Name=WP_223965069.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328792.1;locus_tag=LDO45_RS30395;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_223965069.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 44618 45871 . + . ID=gene-LDO45_RS30400;Name=LDO45_RS30400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30400;old_locus_tag=BDI4_730050 NZ_CAJZAS010000231.1 Protein Homology CDS 44618 45871 . + 0 ID=cds-WP_040144529.1;Parent=gene-LDO45_RS30400;Dbxref=GenBank:WP_040144529.1;Name=WP_040144529.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492698.1;locus_tag=LDO45_RS30400;product=aspartate kinase;protein_id=WP_040144529.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 45982 46075 . + . ID=gene-LDO45_RS30405;Name=LDO45_RS30405;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS30405;old_locus_tag=BDI4_TRNA22 NZ_CAJZAS010000231.1 tRNAscan-SE tRNA 45982 46075 . + . ID=rna-LDO45_RS30405;Parent=gene-LDO45_RS30405;anticodon=(pos:46016..46018);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS30405;product=tRNA-Ser NZ_CAJZAS010000231.1 tRNAscan-SE exon 45982 46075 . + . ID=exon-LDO45_RS30405-1;Parent=rna-LDO45_RS30405;anticodon=(pos:46016..46018);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS30405;product=tRNA-Ser NZ_CAJZAS010000231.1 RefSeq gene 46261 47634 . + . ID=gene-LDO45_RS30410;Name=LDO45_RS30410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30410;old_locus_tag=BDI4_730051 NZ_CAJZAS010000231.1 Protein Homology CDS 46261 47634 . + 0 ID=cds-WP_223965070.1;Parent=gene-LDO45_RS30410;Dbxref=GenBank:WP_223965070.1;Name=WP_223965070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885193.1;locus_tag=LDO45_RS30410;product=hypothetical protein;protein_id=WP_223965070.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 48088 49614 . + . ID=gene-LDO45_RS30415;Name=LDO45_RS30415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30415;old_locus_tag=BDI4_730052 NZ_CAJZAS010000231.1 Protein Homology CDS 48088 49614 . + 0 ID=cds-WP_223965071.1;Parent=gene-LDO45_RS30415;Dbxref=GenBank:WP_223965071.1;Name=WP_223965071.1;Ontology_term=GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364181.1;locus_tag=LDO45_RS30415;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_223965071.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 49872 50075 . - . ID=gene-LDO45_RS30420;Name=LDO45_RS30420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30420 NZ_CAJZAS010000231.1 GeneMarkS-2+ CDS 49872 50075 . - 0 ID=cds-WP_223965077.1;Parent=gene-LDO45_RS30420;Dbxref=GenBank:WP_223965077.1;Name=WP_223965077.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS30420;product=hypothetical protein;protein_id=WP_223965077.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 49975 50781 . + . ID=gene-LDO45_RS30425;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=LDO45_RS30425;old_locus_tag=BDI4_730053 NZ_CAJZAS010000231.1 Protein Homology CDS 49975 50781 . + 0 ID=cds-WP_223965072.1;Parent=gene-LDO45_RS30425;Dbxref=GenBank:WP_223965072.1;Name=WP_223965072.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoA;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885986.1;locus_tag=LDO45_RS30425;product=ubiquinol oxidase subunit II;protein_id=WP_223965072.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 50785 52791 . + . ID=gene-LDO45_RS30430;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=LDO45_RS30430;old_locus_tag=BDI4_730054 NZ_CAJZAS010000231.1 Protein Homology CDS 50785 52791 . + 0 ID=cds-WP_059702205.1;Parent=gene-LDO45_RS30430;Dbxref=GenBank:WP_059702205.1;Name=WP_059702205.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoB;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331750.1;locus_tag=LDO45_RS30430;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_059702205.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 52791 53399 . + . ID=gene-LDO45_RS30435;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;locus_tag=LDO45_RS30435;old_locus_tag=BDI4_730055 NZ_CAJZAS010000231.1 Protein Homology CDS 52791 53399 . + 0 ID=cds-WP_059690920.1;Parent=gene-LDO45_RS30435;Dbxref=GenBank:WP_059690920.1;Name=WP_059690920.1;Ontology_term=GO:0019646,GO:0009486;gbkey=CDS;gene=cyoC;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657331.1;locus_tag=LDO45_RS30435;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_059690920.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 53400 53732 . + . ID=gene-LDO45_RS30440;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=LDO45_RS30440;old_locus_tag=BDI4_730056 NZ_CAJZAS010000231.1 Protein Homology CDS 53400 53732 . + 0 ID=cds-WP_223965073.1;Parent=gene-LDO45_RS30440;Dbxref=GenBank:WP_223965073.1;Name=WP_223965073.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoD;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352504.1;locus_tag=LDO45_RS30440;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_223965073.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq pseudogene 54015 54086 . + . ID=gene-LDO45_RS34455;Name=LDO45_RS34455;end_range=54086,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34455;partial=true;pseudo=true NZ_CAJZAS010000231.1 Protein Homology CDS 54015 54086 . + 0 ID=cds-LDO45_RS34455;Parent=gene-LDO45_RS34455;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=54086,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549499.1;locus_tag=LDO45_RS34455;partial=true;product=DNA-binding response regulator;pseudo=true;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 54544 54906 . + . ID=gene-LDO45_RS30445;Name=LDO45_RS30445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30445;old_locus_tag=BDI4_730058 NZ_CAJZAS010000231.1 Protein Homology CDS 54544 54906 . + 0 ID=cds-WP_059690965.1;Parent=gene-LDO45_RS30445;Dbxref=GenBank:WP_059690965.1;Name=WP_059690965.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549502.1;locus_tag=LDO45_RS30445;product=hypothetical protein;protein_id=WP_059690965.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 55108 56991 . + . ID=gene-LDO45_RS30450;Name=LDO45_RS30450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30450;old_locus_tag=BDI4_730059 NZ_CAJZAS010000231.1 Protein Homology CDS 55108 56991 . + 0 ID=cds-WP_223965074.1;Parent=gene-LDO45_RS30450;Dbxref=GenBank:WP_223965074.1;Name=WP_223965074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885186.1;locus_tag=LDO45_RS30450;product=extracellular solute-binding protein;protein_id=WP_223965074.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 57044 58087 . + . ID=gene-LDO45_RS30455;Name=LDO45_RS30455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30455;old_locus_tag=BDI4_730060 NZ_CAJZAS010000231.1 Protein Homology CDS 57044 58087 . + 0 ID=cds-WP_059535752.1;Parent=gene-LDO45_RS30455;Dbxref=GenBank:WP_059535752.1;Name=WP_059535752.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890352.1;locus_tag=LDO45_RS30455;product=microcin C ABC transporter permease YejB;protein_id=WP_059535752.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 58163 59260 . + . ID=gene-LDO45_RS30460;Name=LDO45_RS30460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30460;old_locus_tag=BDI4_730062 NZ_CAJZAS010000231.1 Protein Homology CDS 58163 59260 . + 0 ID=cds-WP_059464142.1;Parent=gene-LDO45_RS30460;Dbxref=GenBank:WP_059464142.1;Name=WP_059464142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478449.1;locus_tag=LDO45_RS30460;product=ABC transporter permease;protein_id=WP_059464142.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 59257 60879 . + . ID=gene-LDO45_RS30465;Name=LDO45_RS30465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30465;old_locus_tag=BDI4_730061 NZ_CAJZAS010000231.1 Protein Homology CDS 59257 60879 . + 0 ID=cds-WP_223965075.1;Parent=gene-LDO45_RS30465;Dbxref=GenBank:WP_223965075.1;Name=WP_223965075.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657318.1;locus_tag=LDO45_RS30465;product=ABC transporter ATP-binding protein;protein_id=WP_223965075.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 61008 61682 . + . ID=gene-LDO45_RS30470;Name=LDO45_RS30470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30470;old_locus_tag=BDI4_730063 NZ_CAJZAS010000231.1 Protein Homology CDS 61008 61682 . + 0 ID=cds-WP_059535746.1;Parent=gene-LDO45_RS30470;Dbxref=GenBank:WP_059535746.1;Name=WP_059535746.1;Ontology_term=GO:0006508,GO:0008233,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760701.1;locus_tag=LDO45_RS30470;product=C40 family peptidase;protein_id=WP_059535746.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 61810 62736 . - . ID=gene-LDO45_RS30475;Name=LDO45_RS30475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30475;old_locus_tag=BDI4_730064 NZ_CAJZAS010000231.1 Protein Homology CDS 61810 62736 . - 0 ID=cds-WP_059535744.1;Parent=gene-LDO45_RS30475;Dbxref=GenBank:WP_059535744.1;Name=WP_059535744.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364163.1;locus_tag=LDO45_RS30475;product=patatin-like phospholipase family protein;protein_id=WP_059535744.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 63017 64426 . + . ID=gene-LDO45_RS30480;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=LDO45_RS30480;old_locus_tag=BDI4_730065 NZ_CAJZAS010000231.1 Protein Homology CDS 63017 64426 . + 0 ID=cds-WP_059535742.1;Parent=gene-LDO45_RS30480;Dbxref=GenBank:WP_059535742.1;Name=WP_059535742.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014723246.1;locus_tag=LDO45_RS30480;product=glutamate--tRNA ligase;protein_id=WP_059535742.1;transl_table=11 NZ_CAJZAS010000231.1 RefSeq gene 64554 64629 . + . ID=gene-LDO45_RS30485;Name=LDO45_RS30485;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS30485;old_locus_tag=BDI4_TRNA23 NZ_CAJZAS010000231.1 tRNAscan-SE tRNA 64554 64629 . + . ID=rna-LDO45_RS30485;Parent=gene-LDO45_RS30485;anticodon=(pos:64587..64589);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS30485;product=tRNA-Ala NZ_CAJZAS010000231.1 tRNAscan-SE exon 64554 64629 . + . ID=exon-LDO45_RS30485-1;Parent=rna-LDO45_RS30485;anticodon=(pos:64587..64589);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS30485;product=tRNA-Ala ##sequence-region NZ_CAJZAS010000232.1 1 91573 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000232.1 RefSeq region 1 91573 . + . ID=NZ_CAJZAS010000232.1:1..91573;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_74 NZ_CAJZAS010000232.1 RefSeq gene 509 1432 . + . ID=gene-LDO45_RS30490;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=LDO45_RS30490;old_locus_tag=BDI4_740002 NZ_CAJZAS010000232.1 Protein Homology CDS 509 1432 . + 0 ID=cds-WP_223965078.1;Parent=gene-LDO45_RS30490;Dbxref=GenBank:WP_223965078.1;Name=WP_223965078.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894247.1;locus_tag=LDO45_RS30490;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_223965078.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 1445 2605 . + . ID=gene-LDO45_RS30495;Name=hpnH;gbkey=Gene;gene=hpnH;gene_biotype=protein_coding;locus_tag=LDO45_RS30495;old_locus_tag=BDI4_740003 NZ_CAJZAS010000232.1 Protein Homology CDS 1445 2605 . + 0 ID=cds-WP_059528840.1;Parent=gene-LDO45_RS30495;Dbxref=GenBank:WP_059528840.1;Name=WP_059528840.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;gene=hpnH;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602855.1;locus_tag=LDO45_RS30495;product=adenosyl-hopene transferase HpnH;protein_id=WP_059528840.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 2756 3016 . - . ID=gene-LDO45_RS30500;Name=LDO45_RS30500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30500;old_locus_tag=BDI4_740004 NZ_CAJZAS010000232.1 Protein Homology CDS 2756 3016 . - 0 ID=cds-WP_059689272.1;Parent=gene-LDO45_RS30500;Dbxref=GenBank:WP_059689272.1;Name=WP_059689272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750234.1;locus_tag=LDO45_RS30500;product=hypothetical protein;protein_id=WP_059689272.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 3176 3655 . - . ID=gene-LDO45_RS30505;Name=LDO45_RS30505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30505;old_locus_tag=BDI4_740005 NZ_CAJZAS010000232.1 Protein Homology CDS 3176 3655 . - 0 ID=cds-WP_059689271.1;Parent=gene-LDO45_RS30505;Dbxref=GenBank:WP_059689271.1;Name=WP_059689271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485040.1;locus_tag=LDO45_RS30505;product=hypothetical protein;protein_id=WP_059689271.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 3882 4259 . - . ID=gene-LDO45_RS30510;Name=LDO45_RS30510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30510;old_locus_tag=BDI4_740007 NZ_CAJZAS010000232.1 Protein Homology CDS 3882 4259 . - 0 ID=cds-WP_124624537.1;Parent=gene-LDO45_RS30510;Dbxref=GenBank:WP_124624537.1;Name=WP_124624537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761276.1;locus_tag=LDO45_RS30510;product=hypothetical protein;protein_id=WP_124624537.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 4755 5108 . + . ID=gene-LDO45_RS30515;Name=LDO45_RS30515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30515;old_locus_tag=BDI4_740009 NZ_CAJZAS010000232.1 Protein Homology CDS 4755 5108 . + 0 ID=cds-WP_223965079.1;Parent=gene-LDO45_RS30515;Dbxref=GenBank:WP_223965079.1;Name=WP_223965079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548877.1;locus_tag=LDO45_RS30515;product=DOPA 4%2C5-dioxygenase family protein;protein_id=WP_223965079.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 5227 5658 . + . ID=gene-LDO45_RS30520;Name=LDO45_RS30520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30520;old_locus_tag=BDI4_740010 NZ_CAJZAS010000232.1 Protein Homology CDS 5227 5658 . + 0 ID=cds-WP_223965080.1;Parent=gene-LDO45_RS30520;Dbxref=GenBank:WP_223965080.1;Name=WP_223965080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216245.1;locus_tag=LDO45_RS30520;product=nuclear transport factor 2 family protein;protein_id=WP_223965080.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 5686 6306 . - . ID=gene-LDO45_RS30525;Name=LDO45_RS30525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30525;old_locus_tag=BDI4_740011 NZ_CAJZAS010000232.1 Protein Homology CDS 5686 6306 . - 0 ID=cds-WP_059448906.1;Parent=gene-LDO45_RS30525;Dbxref=GenBank:WP_059448906.1;Name=WP_059448906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009914721.1;locus_tag=LDO45_RS30525;product=hemolysin III family protein;protein_id=WP_059448906.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 6522 6728 . - . ID=gene-LDO45_RS30530;Name=LDO45_RS30530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30530;old_locus_tag=BDI4_740012 NZ_CAJZAS010000232.1 Protein Homology CDS 6522 6728 . - 0 ID=cds-WP_027781714.1;Parent=gene-LDO45_RS30530;Dbxref=GenBank:WP_027781714.1;Name=WP_027781714.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523392.1;locus_tag=LDO45_RS30530;product=YbdD/YjiX family protein;protein_id=WP_027781714.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 6741 8819 . - . ID=gene-LDO45_RS30535;Name=LDO45_RS30535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30535;old_locus_tag=BDI4_740013 NZ_CAJZAS010000232.1 Protein Homology CDS 6741 8819 . - 0 ID=cds-WP_059528858.1;Parent=gene-LDO45_RS30535;Dbxref=GenBank:WP_059528858.1;Name=WP_059528858.1;Ontology_term=GO:0009267,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015603803.1;locus_tag=LDO45_RS30535;product=carbon starvation CstA family protein;protein_id=WP_059528858.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 9103 9531 . - . ID=gene-LDO45_RS30540;Name=LDO45_RS30540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30540;old_locus_tag=BDI4_740014 NZ_CAJZAS010000232.1 Protein Homology CDS 9103 9531 . - 0 ID=cds-WP_059528861.1;Parent=gene-LDO45_RS30540;Dbxref=GenBank:WP_059528861.1;Name=WP_059528861.1;Ontology_term=GO:0019684,GO:0042314;gbkey=CDS;go_function=bacteriochlorophyll binding|0042314||IEA;go_process=photosynthesis%2C light reaction|0019684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881069.1;locus_tag=LDO45_RS30540;product=PRC-barrel domain-containing protein;protein_id=WP_059528861.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 9814 10521 . - . ID=gene-LDO45_RS30545;Name=cblR;gbkey=Gene;gene=cblR;gene_biotype=protein_coding;locus_tag=LDO45_RS30545;old_locus_tag=BDI4_740015 NZ_CAJZAS010000232.1 Protein Homology CDS 9814 10521 . - 0 ID=cds-WP_059689267.1;Parent=gene-LDO45_RS30545;Dbxref=GenBank:WP_059689267.1;Name=WP_059689267.1;gbkey=CDS;gene=cblR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367298.1;locus_tag=LDO45_RS30545;product=cable pilus system response regulator transcription factor CblR;protein_id=WP_059689267.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 10610 11518 . - . ID=gene-LDO45_RS34335;Name=LDO45_RS34335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34335 NZ_CAJZAS010000232.1 GeneMarkS-2+ CDS 10610 11518 . - 0 ID=cds-WP_290371046.1;Parent=gene-LDO45_RS34335;Dbxref=GenBank:WP_290371046.1;Name=WP_290371046.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34335;product=hypothetical protein;protein_id=WP_290371046.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq pseudogene 11429 11629 . + . ID=gene-LDO45_RS34340;Name=LDO45_RS34340;end_range=11629,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS34340;partial=true;pseudo=true NZ_CAJZAS010000232.1 Protein Homology CDS 11429 11629 . + 0 ID=cds-LDO45_RS34340;Parent=gene-LDO45_RS34340;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=11629,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014567.5;locus_tag=LDO45_RS34340;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 11651 13894 . - . ID=gene-LDO45_RS30560;Name=LDO45_RS30560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30560;old_locus_tag=BDI4_740017 NZ_CAJZAS010000232.1 Protein Homology CDS 11651 13894 . - 0 ID=cds-WP_290371047.1;Parent=gene-LDO45_RS30560;Dbxref=GenBank:WP_290371047.1;Name=WP_290371047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012761541.1;locus_tag=LDO45_RS30560;product=ATP-binding protein;protein_id=WP_290371047.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 14388 15518 . - . ID=gene-LDO45_RS30565;Name=LDO45_RS30565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30565;old_locus_tag=BDI4_740018 NZ_CAJZAS010000232.1 Protein Homology CDS 14388 15518 . - 0 ID=cds-WP_223965081.1;Parent=gene-LDO45_RS30565;Dbxref=GenBank:WP_223965081.1;Name=WP_223965081.1;Ontology_term=GO:0009073,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548832.1;locus_tag=LDO45_RS30565;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_223965081.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 15683 16990 . - . ID=gene-LDO45_RS30570;Name=LDO45_RS30570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30570;old_locus_tag=BDI4_740019 NZ_CAJZAS010000232.1 Protein Homology CDS 15683 16990 . - 0 ID=cds-WP_223965082.1;Parent=gene-LDO45_RS30570;Dbxref=GenBank:WP_223965082.1;Name=WP_223965082.1;Ontology_term=GO:0016042,GO:0004806;gbkey=CDS;go_function=triglyceride lipase activity|0004806||IEA;go_process=lipid catabolic process|0016042||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480268.1;locus_tag=LDO45_RS30570;product=lipase family protein;protein_id=WP_223965082.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 17365 17787 . + . ID=gene-LDO45_RS30575;Name=LDO45_RS30575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30575;old_locus_tag=BDI4_740021 NZ_CAJZAS010000232.1 Protein Homology CDS 17365 17787 . + 0 ID=cds-WP_223965083.1;Parent=gene-LDO45_RS30575;Dbxref=GenBank:WP_223965083.1;Name=WP_223965083.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659828.1;locus_tag=LDO45_RS30575;product=hypothetical protein;protein_id=WP_223965083.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 17873 18583 . - . ID=gene-LDO45_RS30580;Name=LDO45_RS30580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30580;old_locus_tag=BDI4_740022 NZ_CAJZAS010000232.1 Protein Homology CDS 17873 18583 . - 0 ID=cds-WP_223965084.1;Parent=gene-LDO45_RS30580;Dbxref=GenBank:WP_223965084.1;Name=WP_223965084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659829.1;locus_tag=LDO45_RS30580;product=YceH family protein;protein_id=WP_223965084.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 18985 19749 . + . ID=gene-LDO45_RS30585;Name=LDO45_RS30585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30585;old_locus_tag=BDI4_740024 NZ_CAJZAS010000232.1 Protein Homology CDS 18985 19749 . + 0 ID=cds-WP_223965085.1;Parent=gene-LDO45_RS30585;Dbxref=GenBank:WP_223965085.1;Name=WP_223965085.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659830.1;locus_tag=LDO45_RS30585;product=SDR family oxidoreductase;protein_id=WP_223965085.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 19794 20531 . + . ID=gene-LDO45_RS30590;Name=hutC;gbkey=Gene;gene=hutC;gene_biotype=protein_coding;locus_tag=LDO45_RS30590;old_locus_tag=BDI4_740023 NZ_CAJZAS010000232.1 Protein Homology CDS 19794 20531 . + 0 ID=cds-WP_059528884.1;Parent=gene-LDO45_RS30590;Dbxref=GenBank:WP_059528884.1;Name=WP_059528884.1;Ontology_term=GO:0006355,GO:0006547,GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hutC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-histidine metabolic process|0006547||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766658.1;locus_tag=LDO45_RS30590;product=histidine utilization repressor;protein_id=WP_059528884.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 20632 21486 . - . ID=gene-LDO45_RS30595;Name=LDO45_RS30595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30595;old_locus_tag=BDI4_740026 NZ_CAJZAS010000232.1 Protein Homology CDS 20632 21486 . - 0 ID=cds-WP_223965086.1;Parent=gene-LDO45_RS30595;Dbxref=GenBank:WP_223965086.1;Name=WP_223965086.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485056.1;locus_tag=LDO45_RS30595;product=phytanoyl-CoA dioxygenase family protein;protein_id=WP_223965086.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 21518 22321 . - . ID=gene-LDO45_RS30600;Name=LDO45_RS30600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30600;old_locus_tag=BDI4_740027 NZ_CAJZAS010000232.1 Protein Homology CDS 21518 22321 . - 0 ID=cds-WP_059528891.1;Parent=gene-LDO45_RS30600;Dbxref=GenBank:WP_059528891.1;Name=WP_059528891.1;Ontology_term=GO:0006865,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485061.1;locus_tag=LDO45_RS30600;product=ABC transporter substrate-binding protein;protein_id=WP_059528891.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 22887 23753 . + . ID=gene-LDO45_RS30605;Name=LDO45_RS30605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30605;old_locus_tag=BDI4_740029 NZ_CAJZAS010000232.1 Protein Homology CDS 22887 23753 . + 0 ID=cds-WP_059689257.1;Parent=gene-LDO45_RS30605;Dbxref=GenBank:WP_059689257.1;Name=WP_059689257.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758437.1;locus_tag=LDO45_RS30605;product=LysR family transcriptional regulator;protein_id=WP_059689257.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq pseudogene 23813 24249 . - . ID=gene-LDO45_RS30610;Name=LDO45_RS30610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS30610;old_locus_tag=BDI4_740030;pseudo=true NZ_CAJZAS010000232.1 Protein Homology CDS 23813 24249 . - 0 ID=cds-LDO45_RS30610;Parent=gene-LDO45_RS30610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494316.1;locus_tag=LDO45_RS30610;product=nuclear transport factor 2 family protein;pseudo=true;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 24356 25540 . - . ID=gene-LDO45_RS30615;Name=LDO45_RS30615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30615;old_locus_tag=BDI4_740031 NZ_CAJZAS010000232.1 Protein Homology CDS 24356 25540 . - 0 ID=cds-WP_223965087.1;Parent=gene-LDO45_RS30615;Dbxref=GenBank:WP_223965087.1;Name=WP_223965087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750208.1;locus_tag=LDO45_RS30615;product=amidohydrolase family protein;protein_id=WP_223965087.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 25616 26815 . - . ID=gene-LDO45_RS30620;Name=LDO45_RS30620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30620;old_locus_tag=BDI4_740032 NZ_CAJZAS010000232.1 Protein Homology CDS 25616 26815 . - 0 ID=cds-WP_223965088.1;Parent=gene-LDO45_RS30620;Dbxref=GenBank:WP_223965088.1;Name=WP_223965088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485033.1;locus_tag=LDO45_RS30620;product=amidohydrolase family protein;protein_id=WP_223965088.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 27246 27851 . + . ID=gene-LDO45_RS30625;Name=LDO45_RS30625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30625;old_locus_tag=BDI4_740033 NZ_CAJZAS010000232.1 Protein Homology CDS 27246 27851 . + 0 ID=cds-WP_223965089.1;Parent=gene-LDO45_RS30625;Dbxref=GenBank:WP_223965089.1;Name=WP_223965089.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339114.1;locus_tag=LDO45_RS30625;product=glycine zipper 2TM domain-containing protein;protein_id=WP_223965089.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 28350 28856 . + . ID=gene-LDO45_RS30630;Name=LDO45_RS30630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30630;old_locus_tag=BDI4_740034 NZ_CAJZAS010000232.1 Protein Homology CDS 28350 28856 . + 0 ID=cds-WP_059528911.1;Parent=gene-LDO45_RS30630;Dbxref=GenBank:WP_059528911.1;Name=WP_059528911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758433.1;locus_tag=LDO45_RS30630;product=GNAT family N-acetyltransferase;protein_id=WP_059528911.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 29132 30490 . + . ID=gene-LDO45_RS30635;Name=LDO45_RS30635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30635;old_locus_tag=BDI4_740035 NZ_CAJZAS010000232.1 Protein Homology CDS 29132 30490 . + 0 ID=cds-WP_223965090.1;Parent=gene-LDO45_RS30635;Dbxref=GenBank:WP_223965090.1;Name=WP_223965090.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894260.1;locus_tag=LDO45_RS30635;product=aspartate aminotransferase family protein;protein_id=WP_223965090.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 30548 31771 . - . ID=gene-LDO45_RS30640;Name=LDO45_RS30640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30640;old_locus_tag=BDI4_740036 NZ_CAJZAS010000232.1 Protein Homology CDS 30548 31771 . - 0 ID=cds-WP_223965091.1;Parent=gene-LDO45_RS30640;Dbxref=GenBank:WP_223965091.1;Name=WP_223965091.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900772.1;locus_tag=LDO45_RS30640;product=serine hydrolase;protein_id=WP_223965091.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 31843 33039 . - . ID=gene-LDO45_RS30645;Name=LDO45_RS30645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30645;old_locus_tag=BDI4_740037 NZ_CAJZAS010000232.1 Protein Homology CDS 31843 33039 . - 0 ID=cds-WP_223965092.1;Parent=gene-LDO45_RS30645;Dbxref=GenBank:WP_223965092.1;Name=WP_223965092.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900771.1;locus_tag=LDO45_RS30645;product=serine hydrolase;protein_id=WP_223965092.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 33104 34519 . - . ID=gene-LDO45_RS30650;Name=hydA;gbkey=Gene;gene=hydA;gene_biotype=protein_coding;locus_tag=LDO45_RS30650;old_locus_tag=BDI4_740038 NZ_CAJZAS010000232.1 Protein Homology CDS 33104 34519 . - 0 ID=cds-WP_223965093.1;Parent=gene-LDO45_RS30650;Dbxref=GenBank:WP_223965093.1;Name=WP_223965093.1;Ontology_term=GO:0008152,GO:0004157,GO:0005737;gbkey=CDS;gene=hydA;go_component=cytoplasm|0005737||IEA;go_function=dihydropyrimidinase activity|0004157||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900770.1;locus_tag=LDO45_RS30650;product=dihydropyrimidinase;protein_id=WP_223965093.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 34530 35258 . - . ID=gene-LDO45_RS30655;Name=LDO45_RS30655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30655;old_locus_tag=BDI4_740039 NZ_CAJZAS010000232.1 Protein Homology CDS 34530 35258 . - 0 ID=cds-WP_223965094.1;Parent=gene-LDO45_RS30655;Dbxref=GenBank:WP_223965094.1;Name=WP_223965094.1;Ontology_term=GO:0008152,GO:0036361;gbkey=CDS;go_function=racemase activity%2C acting on amino acids and derivatives|0036361||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900769.1;locus_tag=LDO45_RS30655;product=aspartate/glutamate racemase family protein;protein_id=WP_223965094.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 35310 36608 . - . ID=gene-LDO45_RS30660;Name=LDO45_RS30660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30660;old_locus_tag=BDI4_740040 NZ_CAJZAS010000232.1 Protein Homology CDS 35310 36608 . - 0 ID=cds-WP_223965095.1;Parent=gene-LDO45_RS30660;Dbxref=GenBank:WP_223965095.1;Name=WP_223965095.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900768.1;locus_tag=LDO45_RS30660;product=MFS transporter;protein_id=WP_223965095.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 36781 37494 . + . ID=gene-LDO45_RS30665;Name=LDO45_RS30665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30665;old_locus_tag=BDI4_740041 NZ_CAJZAS010000232.1 Protein Homology CDS 36781 37494 . + 0 ID=cds-WP_124901764.1;Parent=gene-LDO45_RS30665;Dbxref=GenBank:WP_124901764.1;Name=WP_124901764.1;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900767.1;locus_tag=LDO45_RS30665;product=GntR family transcriptional regulator;protein_id=WP_124901764.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 37588 38205 . - . ID=gene-LDO45_RS30670;Name=LDO45_RS30670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30670;old_locus_tag=BDI4_740042 NZ_CAJZAS010000232.1 Protein Homology CDS 37588 38205 . - 0 ID=cds-WP_223965096.1;Parent=gene-LDO45_RS30670;Dbxref=GenBank:WP_223965096.1;Name=WP_223965096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758425.1;locus_tag=LDO45_RS30670;product=PolC-type DNA polymerase III;protein_id=WP_223965096.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 38366 40090 . - . ID=gene-LDO45_RS30675;Name=LDO45_RS30675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30675;old_locus_tag=BDI4_740044 NZ_CAJZAS010000232.1 Protein Homology CDS 38366 40090 . - 0 ID=cds-WP_223965097.1;Parent=gene-LDO45_RS30675;Dbxref=GenBank:WP_223965097.1;Name=WP_223965097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339108.1;locus_tag=LDO45_RS30675;product=tannase/feruloyl esterase family alpha/beta hydrolase;protein_id=WP_223965097.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 40119 41267 . - . ID=gene-LDO45_RS30680;Name=LDO45_RS30680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30680;old_locus_tag=BDI4_740045 NZ_CAJZAS010000232.1 Protein Homology CDS 40119 41267 . - 0 ID=cds-WP_059528940.1;Parent=gene-LDO45_RS30680;Dbxref=GenBank:WP_059528940.1;Name=WP_059528940.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367111.1;locus_tag=LDO45_RS30680;product=porin;protein_id=WP_059528940.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 41333 42538 . - . ID=gene-LDO45_RS30685;Name=mhpT;gbkey=Gene;gene=mhpT;gene_biotype=protein_coding;locus_tag=LDO45_RS30685;old_locus_tag=BDI4_740046 NZ_CAJZAS010000232.1 Protein Homology CDS 41333 42538 . - 0 ID=cds-WP_059528943.1;Parent=gene-LDO45_RS30685;Dbxref=GenBank:WP_059528943.1;Name=WP_059528943.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mhpT;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548808.1;locus_tag=LDO45_RS30685;product=3-(3-hydroxy-phenyl)propionate transporter MhpT;protein_id=WP_059528943.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 42691 44598 . - . ID=gene-LDO45_RS30690;Name=LDO45_RS30690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30690;old_locus_tag=BDI4_740047 NZ_CAJZAS010000232.1 Protein Homology CDS 42691 44598 . - 0 ID=cds-WP_223965098.1;Parent=gene-LDO45_RS30690;Dbxref=GenBank:WP_223965098.1;Name=WP_223965098.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494302.1;locus_tag=LDO45_RS30690;product=feruloyl-CoA synthase;protein_id=WP_223965098.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 44595 46043 . - . ID=gene-LDO45_RS30695;Name=LDO45_RS30695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30695;old_locus_tag=BDI4_740048 NZ_CAJZAS010000232.1 Protein Homology CDS 44595 46043 . - 0 ID=cds-WP_059689240.1;Parent=gene-LDO45_RS30695;Dbxref=GenBank:WP_059689240.1;Name=WP_059689240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353666.1;locus_tag=LDO45_RS30695;product=aldehyde dehydrogenase;protein_id=WP_059689240.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 46091 46921 . - . ID=gene-LDO45_RS30700;Name=LDO45_RS30700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30700;old_locus_tag=BDI4_740049 NZ_CAJZAS010000232.1 Protein Homology CDS 46091 46921 . - 0 ID=cds-WP_059448873.1;Parent=gene-LDO45_RS30700;Dbxref=GenBank:WP_059448873.1;Name=WP_059448873.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029615.1;locus_tag=LDO45_RS30700;product=p-hydroxycinnamoyl CoA hydratase/lyase;protein_id=WP_059448873.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 47152 47655 . - . ID=gene-LDO45_RS30705;Name=LDO45_RS30705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30705;old_locus_tag=BDI4_740050 NZ_CAJZAS010000232.1 Protein Homology CDS 47152 47655 . - 0 ID=cds-WP_059698158.1;Parent=gene-LDO45_RS30705;Dbxref=GenBank:WP_059698158.1;Name=WP_059698158.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659857.1;locus_tag=LDO45_RS30705;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_059698158.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 47827 48726 . - . ID=gene-LDO45_RS30710;Name=LDO45_RS30710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30710;old_locus_tag=BDI4_740051 NZ_CAJZAS010000232.1 Protein Homology CDS 47827 48726 . - 0 ID=cds-WP_223965099.1;Parent=gene-LDO45_RS30710;Dbxref=GenBank:WP_223965099.1;Name=WP_223965099.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_039340385.1;locus_tag=LDO45_RS30710;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_223965099.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 48778 49797 . - . ID=gene-LDO45_RS30715;Name=araH;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=LDO45_RS30715;old_locus_tag=BDI4_740052 NZ_CAJZAS010000232.1 Protein Homology CDS 48778 49797 . - 0 ID=cds-WP_057925505.1;Parent=gene-LDO45_RS30715;Dbxref=GenBank:WP_057925505.1;Name=WP_057925505.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=araH;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397496.1;locus_tag=LDO45_RS30715;product=L-arabinose ABC transporter permease AraH;protein_id=WP_057925505.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 49823 51370 . - . ID=gene-LDO45_RS30720;Name=araG;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=LDO45_RS30720;old_locus_tag=BDI4_740053 NZ_CAJZAS010000232.1 Protein Homology CDS 49823 51370 . - 0 ID=cds-WP_223965113.1;Parent=gene-LDO45_RS30720;Dbxref=GenBank:WP_223965113.1;Name=WP_223965113.1;Ontology_term=GO:0042882,GO:0005524,GO:0015612,GO:0016020;gbkey=CDS;gene=araG;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type L-arabinose transporter activity|0015612||IEA;go_process=L-arabinose transmembrane transport|0042882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404694.1;locus_tag=LDO45_RS30720;product=L-arabinose ABC transporter ATP-binding protein AraG;protein_id=WP_223965113.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 51391 52395 . - . ID=gene-LDO45_RS30725;Name=LDO45_RS30725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30725;old_locus_tag=BDI4_740054 NZ_CAJZAS010000232.1 Protein Homology CDS 51391 52395 . - 0 ID=cds-WP_059689237.1;Parent=gene-LDO45_RS30725;Dbxref=GenBank:WP_059689237.1;Name=WP_059689237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758832.1;locus_tag=LDO45_RS30725;product=arabinose ABC transporter substrate-binding protein;protein_id=WP_059689237.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 52477 53406 . - . ID=gene-LDO45_RS30730;Name=LDO45_RS30730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30730;old_locus_tag=BDI4_740055 NZ_CAJZAS010000232.1 Protein Homology CDS 52477 53406 . - 0 ID=cds-WP_059689236.1;Parent=gene-LDO45_RS30730;Dbxref=GenBank:WP_059689236.1;Name=WP_059689236.1;Ontology_term=GO:0016491,GO:0016651;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750188.1;locus_tag=LDO45_RS30730;product=Gfo/Idh/MocA family protein;protein_id=WP_059689236.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 53431 54360 . - . ID=gene-LDO45_RS30735;Name=LDO45_RS30735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30735;old_locus_tag=BDI4_740056 NZ_CAJZAS010000232.1 Protein Homology CDS 53431 54360 . - 0 ID=cds-WP_059689235.1;Parent=gene-LDO45_RS30735;Dbxref=GenBank:WP_059689235.1;Name=WP_059689235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881176.1;locus_tag=LDO45_RS30735;product=dihydrodipicolinate synthase family protein;protein_id=WP_059689235.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 54462 56213 . - . ID=gene-LDO45_RS30740;Name=LDO45_RS30740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30740;old_locus_tag=BDI4_740057 NZ_CAJZAS010000232.1 Protein Homology CDS 54462 56213 . - 0 ID=cds-WP_059528963.1;Parent=gene-LDO45_RS30740;Dbxref=GenBank:WP_059528963.1;Name=WP_059528963.1;Ontology_term=GO:0016836,GO:0051536;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494293.1;locus_tag=LDO45_RS30740;product=IlvD/Edd family dehydratase;protein_id=WP_059528963.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 56328 57278 . + . ID=gene-LDO45_RS30745;Name=LDO45_RS30745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30745;old_locus_tag=BDI4_740058 NZ_CAJZAS010000232.1 Protein Homology CDS 56328 57278 . + 0 ID=cds-WP_223965100.1;Parent=gene-LDO45_RS30745;Dbxref=GenBank:WP_223965100.1;Name=WP_223965100.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881173.1;locus_tag=LDO45_RS30745;product=LysR family transcriptional regulator;protein_id=WP_223965100.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 57384 59144 . - . ID=gene-LDO45_RS30750;Name=LDO45_RS30750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30750;old_locus_tag=BDI4_740059 NZ_CAJZAS010000232.1 Protein Homology CDS 57384 59144 . - 0 ID=cds-WP_223965101.1;Parent=gene-LDO45_RS30750;Dbxref=GenBank:WP_223965101.1;Name=WP_223965101.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004548975.1;locus_tag=LDO45_RS30750;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_223965101.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 59208 59798 . - . ID=gene-LDO45_RS30755;Name=LDO45_RS30755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30755;old_locus_tag=BDI4_740060 NZ_CAJZAS010000232.1 Protein Homology CDS 59208 59798 . - 0 ID=cds-WP_223965102.1;Parent=gene-LDO45_RS30755;Dbxref=GenBank:WP_223965102.1;Name=WP_223965102.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: protein motif:HMM:NF019843.5;locus_tag=LDO45_RS30755;product=tetratricopeptide repeat protein;protein_id=WP_223965102.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 59859 60356 . - . ID=gene-LDO45_RS30760;Name=LDO45_RS30760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30760;old_locus_tag=BDI4_740061 NZ_CAJZAS010000232.1 Protein Homology CDS 59859 60356 . - 0 ID=cds-WP_223965103.1;Parent=gene-LDO45_RS30760;Dbxref=GenBank:WP_223965103.1;Name=WP_223965103.1;Ontology_term=GO:0042546;gbkey=CDS;go_process=cell wall biogenesis|0042546||IEA;inference=COORDINATES: protein motif:HMM:NF025918.5;locus_tag=LDO45_RS30760;product=SMI1/KNR4 family protein;protein_id=WP_223965103.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 60367 69780 . - . ID=gene-LDO45_RS30765;Name=LDO45_RS30765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30765;old_locus_tag=BDI4_740062 NZ_CAJZAS010000232.1 Protein Homology CDS 60367 69780 . - 0 ID=cds-WP_223965104.1;Parent=gene-LDO45_RS30765;Dbxref=GenBank:WP_223965104.1;Name=WP_223965104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013588548.1;locus_tag=LDO45_RS30765;product=hemagglutinin repeat-containing protein;protein_id=WP_223965104.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 70011 70487 . - . ID=gene-LDO45_RS30770;Name=LDO45_RS30770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30770;old_locus_tag=BDI4_740064 NZ_CAJZAS010000232.1 Protein Homology CDS 70011 70487 . - 0 ID=cds-WP_223965105.1;Parent=gene-LDO45_RS30770;Dbxref=GenBank:WP_223965105.1;Name=WP_223965105.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750183.1;locus_tag=LDO45_RS30770;product=OsmC family protein;protein_id=WP_223965105.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 70582 71223 . + . ID=gene-LDO45_RS30775;Name=LDO45_RS30775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30775;old_locus_tag=BDI4_740065 NZ_CAJZAS010000232.1 Protein Homology CDS 70582 71223 . + 0 ID=cds-WP_223965106.1;Parent=gene-LDO45_RS30775;Dbxref=GenBank:WP_223965106.1;Name=WP_223965106.1;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339096.1;locus_tag=LDO45_RS30775;product=GntR family transcriptional regulator;protein_id=WP_223965106.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 71339 72373 . - . ID=gene-LDO45_RS30780;Name=LDO45_RS30780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30780;old_locus_tag=BDI4_740066 NZ_CAJZAS010000232.1 Protein Homology CDS 71339 72373 . - 0 ID=cds-WP_223965107.1;Parent=gene-LDO45_RS30780;Dbxref=GenBank:WP_223965107.1;Name=WP_223965107.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750181.1;locus_tag=LDO45_RS30780;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_223965107.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 72564 73712 . + . ID=gene-LDO45_RS30785;Name=LDO45_RS30785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30785;old_locus_tag=BDI4_740067 NZ_CAJZAS010000232.1 Protein Homology CDS 72564 73712 . + 0 ID=cds-WP_223965108.1;Parent=gene-LDO45_RS30785;Dbxref=GenBank:WP_223965108.1;Name=WP_223965108.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659870.1;locus_tag=LDO45_RS30785;product=ABC transporter ATP-binding protein;protein_id=WP_223965108.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 73721 75706 . + . ID=gene-LDO45_RS30790;Name=LDO45_RS30790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30790;old_locus_tag=BDI4_740068 NZ_CAJZAS010000232.1 Protein Homology CDS 73721 75706 . + 0 ID=cds-WP_223965109.1;Parent=gene-LDO45_RS30790;Dbxref=GenBank:WP_223965109.1;Name=WP_223965109.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367133.1;locus_tag=LDO45_RS30790;product=beta-galactosidase;protein_id=WP_223965109.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 75770 77029 . + . ID=gene-LDO45_RS30795;Name=LDO45_RS30795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30795;old_locus_tag=BDI4_740069 NZ_CAJZAS010000232.1 Protein Homology CDS 75770 77029 . + 0 ID=cds-WP_059698236.1;Parent=gene-LDO45_RS30795;Dbxref=GenBank:WP_059698236.1;Name=WP_059698236.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413331.1;locus_tag=LDO45_RS30795;product=ABC transporter substrate-binding protein;protein_id=WP_059698236.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 77084 78013 . + . ID=gene-LDO45_RS30800;Name=LDO45_RS30800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30800;old_locus_tag=BDI4_740070 NZ_CAJZAS010000232.1 Protein Homology CDS 77084 78013 . + 0 ID=cds-WP_223965110.1;Parent=gene-LDO45_RS30800;Dbxref=GenBank:WP_223965110.1;Name=WP_223965110.1;Ontology_term=GO:0008643,GO:0055085,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339092.1;locus_tag=LDO45_RS30800;product=carbohydrate ABC transporter permease;protein_id=WP_223965110.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 78040 78891 . + . ID=gene-LDO45_RS30805;Name=LDO45_RS30805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30805;old_locus_tag=BDI4_740071 NZ_CAJZAS010000232.1 Protein Homology CDS 78040 78891 . + 0 ID=cds-WP_039318652.1;Parent=gene-LDO45_RS30805;Dbxref=GenBank:WP_039318652.1;Name=WP_039318652.1;Ontology_term=GO:0008643,GO:0055085;gbkey=CDS;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024176.1;locus_tag=LDO45_RS30805;product=carbohydrate ABC transporter permease;protein_id=WP_039318652.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq pseudogene 79133 79663 . + . ID=gene-LDO45_RS30810;Name=LDO45_RS30810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS30810;old_locus_tag=BDI4_740072;partial=true;pseudo=true;start_range=.,79133 NZ_CAJZAS010000232.1 Protein Homology CDS 79133 79663 . + 0 ID=cds-LDO45_RS30810;Parent=gene-LDO45_RS30810;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659880.1;locus_tag=LDO45_RS30810;partial=true;product=heterodisulfide reductase-related iron-sulfur binding cluster;pseudo=true;start_range=.,79133;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 79686 80090 . + . ID=gene-LDO45_RS30815;Name=LDO45_RS30815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30815;old_locus_tag=BDI4_740073 NZ_CAJZAS010000232.1 Protein Homology CDS 79686 80090 . + 0 ID=cds-WP_059528988.1;Parent=gene-LDO45_RS30815;Dbxref=GenBank:WP_059528988.1;Name=WP_059528988.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367141.1;locus_tag=LDO45_RS30815;product=heme-binding protein;protein_id=WP_059528988.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 80133 82307 . + . ID=gene-LDO45_RS30820;Name=LDO45_RS30820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30820;old_locus_tag=BDI4_740074 NZ_CAJZAS010000232.1 Protein Homology CDS 80133 82307 . + 0 ID=cds-WP_223965111.1;Parent=gene-LDO45_RS30820;Dbxref=GenBank:WP_223965111.1;Name=WP_223965111.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548774.1;locus_tag=LDO45_RS30820;product=malate synthase G;protein_id=WP_223965111.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 82856 84418 . + . ID=gene-LDO45_RS30825;Name=LDO45_RS30825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30825;old_locus_tag=BDI4_740075 NZ_CAJZAS010000232.1 Protein Homology CDS 82856 84418 . + 0 ID=cds-WP_059698176.1;Parent=gene-LDO45_RS30825;Dbxref=GenBank:WP_059698176.1;Name=WP_059698176.1;Ontology_term=GO:0009966,GO:0009975;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367143.1;locus_tag=LDO45_RS30825;product=sensor domain-containing diguanylate cyclase;protein_id=WP_059698176.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 84549 85928 . + . ID=gene-LDO45_RS30830;Name=LDO45_RS30830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30830;old_locus_tag=BDI4_740076 NZ_CAJZAS010000232.1 Protein Homology CDS 84549 85928 . + 0 ID=cds-WP_059528996.1;Parent=gene-LDO45_RS30830;Dbxref=GenBank:WP_059528996.1;Name=WP_059528996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006397522.1;locus_tag=LDO45_RS30830;product=cache domain-containing protein;protein_id=WP_059528996.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 85960 86604 . + . ID=gene-LDO45_RS30835;Name=LDO45_RS30835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30835;old_locus_tag=BDI4_740077 NZ_CAJZAS010000232.1 Protein Homology CDS 85960 86604 . + 0 ID=cds-WP_059528999.1;Parent=gene-LDO45_RS30835;Dbxref=GenBank:WP_059528999.1;Name=WP_059528999.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367145.1;locus_tag=LDO45_RS30835;product=response regulator transcription factor;protein_id=WP_059528999.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 86713 87309 . - . ID=gene-LDO45_RS30840;Name=LDO45_RS30840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30840;old_locus_tag=BDI4_740078 NZ_CAJZAS010000232.1 Protein Homology CDS 86713 87309 . - 0 ID=cds-WP_059529002.1;Parent=gene-LDO45_RS30840;Dbxref=GenBank:WP_059529002.1;Name=WP_059529002.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009894421.1;locus_tag=LDO45_RS30840;product=phospholipid-binding protein MlaC;protein_id=WP_059529002.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq pseudogene 87637 90268 . + . ID=gene-LDO45_RS30845;Name=LDO45_RS30845;end_range=90268,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS30845;old_locus_tag=BDI4_740079;partial=true;pseudo=true NZ_CAJZAS010000232.1 Protein Homology CDS 87637 90268 . + 0 ID=cds-LDO45_RS30845;Parent=gene-LDO45_RS30845;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016020;end_range=90268,.;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330923.1;locus_tag=LDO45_RS30845;partial=true;product=MMPL family transporter;pseudo=true;transl_table=11 NZ_CAJZAS010000232.1 RefSeq gene 90264 91268 . + . ID=gene-LDO45_RS30850;Name=LDO45_RS30850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30850;old_locus_tag=BDI4_740080 NZ_CAJZAS010000232.1 Protein Homology CDS 90264 91268 . + 0 ID=cds-WP_223965114.1;Parent=gene-LDO45_RS30850;Dbxref=GenBank:WP_223965114.1;Name=WP_223965114.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760603.1;locus_tag=LDO45_RS30850;product=VacJ family lipoprotein;protein_id=WP_223965114.1;transl_table=11 NZ_CAJZAS010000232.1 RefSeq pseudogene 91385 91573 . - . ID=gene-LDO45_RS30855;Name=LDO45_RS30855;end_range=91573,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS30855;old_locus_tag=BDI4_740082;partial=true;pseudo=true NZ_CAJZAS010000232.1 Protein Homology CDS 91385 91573 . - 0 ID=cds-LDO45_RS30855;Parent=gene-LDO45_RS30855;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=91573,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496236.1;locus_tag=LDO45_RS30855;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000233.1 1 28561 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000233.1 RefSeq region 1 28561 . + . ID=NZ_CAJZAS010000233.1:1..28561;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_75 NZ_CAJZAS010000233.1 RefSeq gene 1 501 . - . ID=gene-LDO45_RS30860;Name=LDO45_RS30860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30860;partial=true;start_range=.,1 NZ_CAJZAS010000233.1 Protein Homology CDS 1 501 . - 0 ID=cds-WP_223965115.1;Parent=gene-LDO45_RS30860;Dbxref=GenBank:WP_223965115.1;Name=WP_223965115.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490440.1;locus_tag=LDO45_RS30860;partial=true;product=DUF4136 domain-containing protein;protein_id=WP_223965115.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000233.1 RefSeq gene 539 2926 . - . ID=gene-LDO45_RS30865;Name=LDO45_RS30865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30865;old_locus_tag=BDI4_750002 NZ_CAJZAS010000233.1 Protein Homology CDS 539 2926 . - 0 ID=cds-WP_223965116.1;Parent=gene-LDO45_RS30865;Dbxref=GenBank:WP_223965116.1;Name=WP_223965116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328350.1;locus_tag=LDO45_RS30865;product=CHASE2 domain-containing protein;protein_id=WP_223965116.1;transl_table=11 NZ_CAJZAS010000233.1 RefSeq gene 2937 4298 . - . ID=gene-LDO45_RS30870;Name=LDO45_RS30870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30870;old_locus_tag=BDI4_750003 NZ_CAJZAS010000233.1 Protein Homology CDS 2937 4298 . - 0 ID=cds-WP_223965117.1;Parent=gene-LDO45_RS30870;Dbxref=GenBank:WP_223965117.1;Name=WP_223965117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351745.1;locus_tag=LDO45_RS30870;product=FecR domain-containing protein;protein_id=WP_223965117.1;transl_table=11 NZ_CAJZAS010000233.1 RefSeq gene 4295 4999 . - . ID=gene-LDO45_RS30875;Name=LDO45_RS30875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30875;old_locus_tag=BDI4_750004 NZ_CAJZAS010000233.1 Protein Homology CDS 4295 4999 . - 0 ID=cds-WP_006402120.1;Parent=gene-LDO45_RS30875;Dbxref=GenBank:WP_006402120.1;Name=WP_006402120.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193573.1;locus_tag=LDO45_RS30875;product=response regulator transcription factor;protein_id=WP_006402120.1;transl_table=11 NZ_CAJZAS010000233.1 RefSeq gene 5264 5701 . - . ID=gene-LDO45_RS30880;Name=LDO45_RS30880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30880;old_locus_tag=BDI4_750006 NZ_CAJZAS010000233.1 Protein Homology CDS 5264 5701 . - 0 ID=cds-WP_223965118.1;Parent=gene-LDO45_RS30880;Dbxref=GenBank:WP_223965118.1;Name=WP_223965118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545215.1;locus_tag=LDO45_RS30880;product=peptidase;protein_id=WP_223965118.1;transl_table=11 NZ_CAJZAS010000233.1 RefSeq gene 5928 6155 . - . ID=gene-LDO45_RS30885;Name=LDO45_RS30885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30885;old_locus_tag=BDI4_750007 NZ_CAJZAS010000233.1 Protein Homology CDS 5928 6155 . - 0 ID=cds-WP_006753156.1;Parent=gene-LDO45_RS30885;Dbxref=GenBank:WP_006753156.1;Name=WP_006753156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026473.1;locus_tag=LDO45_RS30885;product=sulfurtransferase TusA family protein;protein_id=WP_006753156.1;transl_table=11 NZ_CAJZAS010000233.1 RefSeq gene 6284 7219 . - . ID=gene-LDO45_RS30890;Name=LDO45_RS30890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30890;old_locus_tag=BDI4_750008 NZ_CAJZAS010000233.1 Protein Homology CDS 6284 7219 . - 0 ID=cds-WP_223965119.1;Parent=gene-LDO45_RS30890;Dbxref=GenBank:WP_223965119.1;Name=WP_223965119.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545214.1;locus_tag=LDO45_RS30890;product=LysR family transcriptional regulator;protein_id=WP_223965119.1;transl_table=11 NZ_CAJZAS010000233.1 RefSeq gene 7327 8847 . + . ID=gene-LDO45_RS30895;Name=LDO45_RS30895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30895;old_locus_tag=BDI4_750009 NZ_CAJZAS010000233.1 Protein Homology CDS 7327 8847 . + 0 ID=cds-WP_059697791.1;Parent=gene-LDO45_RS30895;Dbxref=GenBank:WP_059697791.1;Name=WP_059697791.1;Ontology_term=GO:0018478;gbkey=CDS;go_function=malonate-semialdehyde dehydrogenase (acetylating) activity|0018478||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764544.1;locus_tag=LDO45_RS30895;product=CoA-acylating methylmalonate-semialdehyde dehydrogenase;protein_id=WP_059697791.1;transl_table=11 NZ_CAJZAS010000233.1 RefSeq gene 8910 9794 . - . ID=gene-LDO45_RS30900;Name=LDO45_RS30900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30900;old_locus_tag=BDI4_750010 NZ_CAJZAS010000233.1 Protein Homology CDS 8910 9794 . - 0 ID=cds-WP_059524114.1;Parent=gene-LDO45_RS30900;Dbxref=GenBank:WP_059524114.1;Name=WP_059524114.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497758.1;locus_tag=LDO45_RS30900;product=MurR/RpiR family transcriptional regulator;protein_id=WP_059524114.1;transl_table=11 NZ_CAJZAS010000233.1 RefSeq gene 10079 11251 . - . ID=gene-LDO45_RS30905;Name=LDO45_RS30905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30905;old_locus_tag=BDI4_750011 NZ_CAJZAS010000233.1 Protein Homology CDS 10079 11251 . - 0 ID=cds-WP_059817987.1;Parent=gene-LDO45_RS30905;Dbxref=GenBank:WP_059817987.1;Name=WP_059817987.1;Ontology_term=GO:0016491,GO:0016651;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897275.1;locus_tag=LDO45_RS30905;product=Gfo/Idh/MocA family protein;protein_id=WP_059817987.1;transl_table=11 NZ_CAJZAS010000233.1 RefSeq gene 11307 12233 . - . ID=gene-LDO45_RS30910;Name=LDO45_RS30910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30910;old_locus_tag=BDI4_750012 NZ_CAJZAS010000233.1 Protein Homology CDS 11307 12233 . - 0 ID=cds-WP_223965120.1;Parent=gene-LDO45_RS30910;Dbxref=GenBank:WP_223965120.1;Name=WP_223965120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351739.1;locus_tag=LDO45_RS30910;product=TIM barrel protein;protein_id=WP_223965120.1;transl_table=11 NZ_CAJZAS010000233.1 RefSeq gene 12319 13332 . - . ID=gene-LDO45_RS30915;Name=LDO45_RS30915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30915;old_locus_tag=BDI4_750013 NZ_CAJZAS010000233.1 Protein Homology CDS 12319 13332 . - 0 ID=cds-WP_059524106.1;Parent=gene-LDO45_RS30915;Dbxref=GenBank:WP_059524106.1;Name=WP_059524106.1;Ontology_term=GO:0016491,GO:0016651;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656629.1;locus_tag=LDO45_RS30915;product=Gfo/Idh/MocA family protein;protein_id=WP_059524106.1;transl_table=11 NZ_CAJZAS010000233.1 RefSeq gene 13406 14320 . - . ID=gene-LDO45_RS30920;Name=LDO45_RS30920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30920;old_locus_tag=BDI4_750014 NZ_CAJZAS010000233.1 Protein Homology CDS 13406 14320 . - 0 ID=cds-WP_223965121.1;Parent=gene-LDO45_RS30920;Dbxref=GenBank:WP_223965121.1;Name=WP_223965121.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476228.1;locus_tag=LDO45_RS30920;product=sugar phosphate isomerase/epimerase family protein;protein_id=WP_223965121.1;transl_table=11 NZ_CAJZAS010000233.1 RefSeq gene 14358 15383 . - . ID=gene-LDO45_RS30925;Name=LDO45_RS30925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30925;old_locus_tag=BDI4_750015 NZ_CAJZAS010000233.1 Protein Homology CDS 14358 15383 . - 0 ID=cds-WP_040143986.1;Parent=gene-LDO45_RS30925;Dbxref=GenBank:WP_040143986.1;Name=WP_040143986.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010098739.1;locus_tag=LDO45_RS30925;product=ABC transporter permease;protein_id=WP_040143986.1;transl_table=11 NZ_CAJZAS010000233.1 RefSeq gene 15411 16985 . - . ID=gene-LDO45_RS30930;Name=LDO45_RS30930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30930;old_locus_tag=BDI4_750016 NZ_CAJZAS010000233.1 Protein Homology CDS 15411 16985 . - 0 ID=cds-WP_223965122.1;Parent=gene-LDO45_RS30930;Dbxref=GenBank:WP_223965122.1;Name=WP_223965122.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363686.1;locus_tag=LDO45_RS30930;product=sugar ABC transporter ATP-binding protein;protein_id=WP_223965122.1;transl_table=11 NZ_CAJZAS010000233.1 RefSeq gene 17054 17980 . - . ID=gene-LDO45_RS30935;Name=LDO45_RS30935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30935;old_locus_tag=BDI4_750017 NZ_CAJZAS010000233.1 Protein Homology CDS 17054 17980 . - 0 ID=cds-WP_059524100.1;Parent=gene-LDO45_RS30935;Dbxref=GenBank:WP_059524100.1;Name=WP_059524100.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213578.1;locus_tag=LDO45_RS30935;product=sugar ABC transporter substrate-binding protein;protein_id=WP_059524100.1;transl_table=11 NZ_CAJZAS010000233.1 RefSeq gene 18289 20247 . + . ID=gene-LDO45_RS30940;Name=iolC;gbkey=Gene;gene=iolC;gene_biotype=protein_coding;locus_tag=LDO45_RS30940;old_locus_tag=BDI4_750019 NZ_CAJZAS010000233.1 Protein Homology CDS 18289 20247 . + 0 ID=cds-WP_059697795.1;Parent=gene-LDO45_RS30940;Dbxref=GenBank:WP_059697795.1;Name=WP_059697795.1;Ontology_term=GO:0019310,GO:0047590;gbkey=CDS;gene=iolC;go_function=5-dehydro-2-deoxygluconokinase activity|0047590||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351733.1;locus_tag=LDO45_RS30940;product=5-dehydro-2-deoxygluconokinase;protein_id=WP_059697795.1;transl_table=11 NZ_CAJZAS010000233.1 RefSeq gene 20294 22177 . + . ID=gene-LDO45_RS30945;Name=iolD;gbkey=Gene;gene=iolD;gene_biotype=protein_coding;locus_tag=LDO45_RS30945;old_locus_tag=BDI4_750020 NZ_CAJZAS010000233.1 Protein Homology CDS 20294 22177 . + 0 ID=cds-WP_223965123.1;Parent=gene-LDO45_RS30945;Dbxref=GenBank:WP_223965123.1;Name=WP_223965123.1;Ontology_term=GO:0019310,GO:0016823,GO:0030976;gbkey=CDS;gene=iolD;go_function=hydrolase activity%2C acting on acid carbon-carbon bonds%2C in ketonic substances|0016823||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363683.1;locus_tag=LDO45_RS30945;product=3D-(3%2C5/4)-trihydroxycyclohexane-1%2C2-dione acylhydrolase (decyclizing);protein_id=WP_223965123.1;transl_table=11 NZ_CAJZAS010000233.1 RefSeq gene 22239 23168 . + . ID=gene-LDO45_RS30950;Name=iolE;gbkey=Gene;gene=iolE;gene_biotype=protein_coding;locus_tag=LDO45_RS30950;old_locus_tag=BDI4_750021 NZ_CAJZAS010000233.1 Protein Homology CDS 22239 23168 . + 0 ID=cds-WP_223965124.1;Parent=gene-LDO45_RS30950;Dbxref=GenBank:WP_223965124.1;Name=WP_223965124.1;Ontology_term=GO:0019310,GO:0050114;gbkey=CDS;gene=iolE;go_function=myo-inosose-2 dehydratase activity|0050114||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328343.1;locus_tag=LDO45_RS30950;product=myo-inosose-2 dehydratase;protein_id=WP_223965124.1;transl_table=11 NZ_CAJZAS010000233.1 RefSeq gene 23211 24029 . + . ID=gene-LDO45_RS30955;Name=iolB;gbkey=Gene;gene=iolB;gene_biotype=protein_coding;locus_tag=LDO45_RS30955;old_locus_tag=BDI4_750022 NZ_CAJZAS010000233.1 Protein Homology CDS 23211 24029 . + 0 ID=cds-WP_223965125.1;Parent=gene-LDO45_RS30955;Dbxref=GenBank:WP_223965125.1;Name=WP_223965125.1;Ontology_term=GO:0019310,GO:0016861;gbkey=CDS;gene=iolB;go_function=intramolecular oxidoreductase activity%2C interconverting aldoses and ketoses|0016861||IEA;go_process=inositol catabolic process|0019310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481608.1;locus_tag=LDO45_RS30955;product=5-deoxy-glucuronate isomerase;protein_id=WP_223965125.1;transl_table=11 NZ_CAJZAS010000233.1 RefSeq gene 24122 24616 . + . ID=gene-LDO45_RS30960;Name=LDO45_RS30960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30960;old_locus_tag=BDI4_750023 NZ_CAJZAS010000233.1 Protein Homology CDS 24122 24616 . + 0 ID=cds-WP_223965126.1;Parent=gene-LDO45_RS30960;Dbxref=GenBank:WP_223965126.1;Name=WP_223965126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006753141.1;locus_tag=LDO45_RS30960;product=heme-degrading domain-containing protein;protein_id=WP_223965126.1;transl_table=11 NZ_CAJZAS010000233.1 RefSeq gene 24639 25385 . - . ID=gene-LDO45_RS30965;Name=LDO45_RS30965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30965;old_locus_tag=BDI4_750024 NZ_CAJZAS010000233.1 Protein Homology CDS 24639 25385 . - 0 ID=cds-WP_059524088.1;Parent=gene-LDO45_RS30965;Dbxref=GenBank:WP_059524088.1;Name=WP_059524088.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006476236.1;locus_tag=LDO45_RS30965;product=glucose 1-dehydrogenase;protein_id=WP_059524088.1;transl_table=11 NZ_CAJZAS010000233.1 RefSeq gene 25550 26254 . - . ID=gene-LDO45_RS30970;Name=LDO45_RS30970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30970;old_locus_tag=BDI4_750025 NZ_CAJZAS010000233.1 Protein Homology CDS 25550 26254 . - 0 ID=cds-WP_223965127.1;Parent=gene-LDO45_RS30970;Dbxref=GenBank:WP_223965127.1;Name=WP_223965127.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004542439.1;locus_tag=LDO45_RS30970;product=ABC transporter ATP-binding protein;protein_id=WP_223965127.1;transl_table=11 NZ_CAJZAS010000233.1 RefSeq gene 26251 27000 . - . ID=gene-LDO45_RS30975;Name=LDO45_RS30975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30975;old_locus_tag=BDI4_750026 NZ_CAJZAS010000233.1 Protein Homology CDS 26251 27000 . - 0 ID=cds-WP_059524084.1;Parent=gene-LDO45_RS30975;Dbxref=GenBank:WP_059524084.1;Name=WP_059524084.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363677.1;locus_tag=LDO45_RS30975;product=ABC transporter ATP-binding protein;protein_id=WP_059524084.1;transl_table=11 NZ_CAJZAS010000233.1 RefSeq gene 26997 28223 . - . ID=gene-LDO45_RS30980;Name=LDO45_RS30980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS30980;old_locus_tag=BDI4_750027 NZ_CAJZAS010000233.1 Protein Homology CDS 26997 28223 . - 0 ID=cds-WP_223965128.1;Parent=gene-LDO45_RS30980;Dbxref=GenBank:WP_223965128.1;Name=WP_223965128.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497769.1;locus_tag=LDO45_RS30980;product=branched-chain amino acid ABC transporter permease;protein_id=WP_223965128.1;transl_table=11 NZ_CAJZAS010000233.1 RefSeq pseudogene 28216 28561 . - . ID=gene-LDO45_RS30985;Name=LDO45_RS30985;end_range=28561,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS30985;old_locus_tag=BDI4_750028;partial=true;pseudo=true NZ_CAJZAS010000233.1 Protein Homology CDS 28216 28561 . - 1 ID=cds-LDO45_RS30985;Parent=gene-LDO45_RS30985;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=28561,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011884434.1;locus_tag=LDO45_RS30985;partial=true;product=branched-chain amino acid ABC transporter permease;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000234.1 1 21202 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000234.1 RefSeq region 1 21202 . + . ID=NZ_CAJZAS010000234.1:1..21202;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_76 NZ_CAJZAS010000234.1 RefSeq pseudogene 1 285 . + . ID=gene-LDO45_RS30990;Name=LDO45_RS30990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS30990;old_locus_tag=BDI4_760001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000234.1 Protein Homology CDS 1 285 . + 0 ID=cds-LDO45_RS30990;Parent=gene-LDO45_RS30990;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490440.1;locus_tag=LDO45_RS30990;partial=true;product=DUF4136 domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000234.1 RefSeq gene 346 1230 . - . ID=gene-LDO45_RS30995;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=LDO45_RS30995;old_locus_tag=BDI4_760002 NZ_CAJZAS010000234.1 Protein Homology CDS 346 1230 . - 0 ID=cds-WP_059697780.1;Parent=gene-LDO45_RS30995;Dbxref=GenBank:WP_059697780.1;Name=WP_059697780.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402116.1;locus_tag=LDO45_RS30995;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_059697780.1;transl_table=11 NZ_CAJZAS010000234.1 RefSeq gene 1319 4186 . - . ID=gene-LDO45_RS31000;Name=LDO45_RS31000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31000;old_locus_tag=BDI4_760003 NZ_CAJZAS010000234.1 Protein Homology CDS 1319 4186 . - 0 ID=cds-WP_223965130.1;Parent=gene-LDO45_RS31000;Dbxref=GenBank:WP_223965130.1;Name=WP_223965130.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026481.1;locus_tag=LDO45_RS31000;product=valine--tRNA ligase;protein_id=WP_223965130.1;transl_table=11 NZ_CAJZAS010000234.1 RefSeq gene 4401 6764 . + . ID=gene-LDO45_RS31005;Name=LDO45_RS31005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31005;old_locus_tag=BDI4_760004 NZ_CAJZAS010000234.1 Protein Homology CDS 4401 6764 . + 0 ID=cds-WP_059524132.1;Parent=gene-LDO45_RS31005;Dbxref=GenBank:WP_059524132.1;Name=WP_059524132.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006404978.1;locus_tag=LDO45_RS31005;product=UvrD-helicase domain-containing protein;protein_id=WP_059524132.1;transl_table=11 NZ_CAJZAS010000234.1 RefSeq gene 6761 7558 . + . ID=gene-LDO45_RS31010;Name=LDO45_RS31010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31010;old_locus_tag=BDI4_760005 NZ_CAJZAS010000234.1 Protein Homology CDS 6761 7558 . + 0 ID=cds-WP_059690901.1;Parent=gene-LDO45_RS31010;Dbxref=GenBank:WP_059690901.1;Name=WP_059690901.1;Ontology_term=GO:0009116,GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759817.1;locus_tag=LDO45_RS31010;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=WP_059690901.1;transl_table=11 NZ_CAJZAS010000234.1 RefSeq gene 7625 8863 . - . ID=gene-LDO45_RS31015;Name=LDO45_RS31015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31015;old_locus_tag=BDI4_760006 NZ_CAJZAS010000234.1 Protein Homology CDS 7625 8863 . - 0 ID=cds-WP_223965131.1;Parent=gene-LDO45_RS31015;Dbxref=GenBank:WP_223965131.1;Name=WP_223965131.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006491594.1;locus_tag=LDO45_RS31015;product=MFS transporter;protein_id=WP_223965131.1;transl_table=11 NZ_CAJZAS010000234.1 RefSeq gene 9263 10936 . + . ID=gene-LDO45_RS31020;Name=LDO45_RS31020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31020;old_locus_tag=BDI4_760008 NZ_CAJZAS010000234.1 Protein Homology CDS 9263 10936 . + 0 ID=cds-WP_059524138.1;Parent=gene-LDO45_RS31020;Dbxref=GenBank:WP_059524138.1;Name=WP_059524138.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351753.1;locus_tag=LDO45_RS31020;product=methyl-accepting chemotaxis protein;protein_id=WP_059524138.1;transl_table=11 NZ_CAJZAS010000234.1 RefSeq gene 11134 12162 . + . ID=gene-LDO45_RS31025;Name=LDO45_RS31025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31025;old_locus_tag=BDI4_760010 NZ_CAJZAS010000234.1 Protein Homology CDS 11134 12162 . + 0 ID=cds-WP_175981108.1;Parent=gene-LDO45_RS31025;Dbxref=GenBank:WP_175981108.1;Name=WP_175981108.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF026247.5;locus_tag=LDO45_RS31025;product=EpsG family protein;protein_id=WP_175981108.1;transl_table=11 NZ_CAJZAS010000234.1 RefSeq gene 12199 13074 . - . ID=gene-LDO45_RS31030;Name=LDO45_RS31030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31030;old_locus_tag=BDI4_760011 NZ_CAJZAS010000234.1 Protein Homology CDS 12199 13074 . - 0 ID=cds-WP_047900486.1;Parent=gene-LDO45_RS31030;Dbxref=GenBank:WP_047900486.1;Name=WP_047900486.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897260.1;locus_tag=LDO45_RS31030;product=HlyD family secretion protein;protein_id=WP_047900486.1;transl_table=11 NZ_CAJZAS010000234.1 RefSeq gene 13087 13290 . - . ID=gene-LDO45_RS31035;Name=LDO45_RS31035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31035;old_locus_tag=BDI4_760012 NZ_CAJZAS010000234.1 Protein Homology CDS 13087 13290 . - 0 ID=cds-WP_011351756.1;Parent=gene-LDO45_RS31035;Dbxref=GenBank:WP_011351756.1;Name=WP_011351756.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009891634.1;locus_tag=LDO45_RS31035;product=DUF1656 domain-containing protein;protein_id=WP_011351756.1;transl_table=11 NZ_CAJZAS010000234.1 RefSeq gene 13287 15488 . - . ID=gene-LDO45_RS31040;Name=LDO45_RS31040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31040;old_locus_tag=BDI4_760013 NZ_CAJZAS010000234.1 Protein Homology CDS 13287 15488 . - 0 ID=cds-WP_059524146.1;Parent=gene-LDO45_RS31040;Dbxref=GenBank:WP_059524146.1;Name=WP_059524146.1;Ontology_term=GO:0006810,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363706.1;locus_tag=LDO45_RS31040;product=FUSC family protein;protein_id=WP_059524146.1;transl_table=11 NZ_CAJZAS010000234.1 RefSeq gene 15504 17096 . - . ID=gene-LDO45_RS31045;Name=LDO45_RS31045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31045;old_locus_tag=BDI4_760015 NZ_CAJZAS010000234.1 Protein Homology CDS 15504 17096 . - 0 ID=cds-WP_223965132.1;Parent=gene-LDO45_RS31045;Dbxref=GenBank:WP_223965132.1;Name=WP_223965132.1;Ontology_term=GO:0006810,GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011656648.1;locus_tag=LDO45_RS31045;product=efflux transporter outer membrane subunit;protein_id=WP_223965132.1;transl_table=11 NZ_CAJZAS010000234.1 RefSeq gene 17254 18195 . + . ID=gene-LDO45_RS31050;Name=LDO45_RS31050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31050;old_locus_tag=BDI4_760016 NZ_CAJZAS010000234.1 Protein Homology CDS 17254 18195 . + 0 ID=cds-WP_059690906.1;Parent=gene-LDO45_RS31050;Dbxref=GenBank:WP_059690906.1;Name=WP_059690906.1;Ontology_term=GO:0001216;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010115732.1;locus_tag=LDO45_RS31050;product=LysR family transcriptional regulator;protein_id=WP_059690906.1;transl_table=11 NZ_CAJZAS010000234.1 RefSeq gene 18321 18479 . + . ID=gene-LDO45_RS31055;Name=LDO45_RS31055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31055 NZ_CAJZAS010000234.1 Protein Homology CDS 18321 18479 . + 0 ID=cds-WP_175908214.1;Parent=gene-LDO45_RS31055;Dbxref=GenBank:WP_175908214.1;Name=WP_175908214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897256.1;locus_tag=LDO45_RS31055;product=hypothetical protein;protein_id=WP_175908214.1;transl_table=11 NZ_CAJZAS010000234.1 RefSeq gene 18536 19363 . - . ID=gene-LDO45_RS31060;Name=LDO45_RS31060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31060;old_locus_tag=BDI4_760018 NZ_CAJZAS010000234.1 Protein Homology CDS 18536 19363 . - 0 ID=cds-WP_223965133.1;Parent=gene-LDO45_RS31060;Dbxref=GenBank:WP_223965133.1;Name=WP_223965133.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363709.1;locus_tag=LDO45_RS31060;product=metallophosphoesterase;protein_id=WP_223965133.1;transl_table=11 NZ_CAJZAS010000234.1 RefSeq gene 19389 20810 . - . ID=gene-LDO45_RS31065;Name=LDO45_RS31065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31065;old_locus_tag=BDI4_760019 NZ_CAJZAS010000234.1 Protein Homology CDS 19389 20810 . - 0 ID=cds-WP_223965135.1;Parent=gene-LDO45_RS31065;Dbxref=GenBank:WP_223965135.1;Name=WP_223965135.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011545230.1;locus_tag=LDO45_RS31065;product=FAD-binding oxidoreductase;protein_id=WP_223965135.1;transl_table=11 NZ_CAJZAS010000234.1 RefSeq gene 20831 21202 . - . ID=gene-LDO45_RS31070;Name=LDO45_RS31070;end_range=21202,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31070;old_locus_tag=BDI4_760020;partial=true NZ_CAJZAS010000234.1 Protein Homology CDS 20831 21202 . - 0 ID=cds-WP_223965134.1;Parent=gene-LDO45_RS31070;Dbxref=GenBank:WP_223965134.1;Name=WP_223965134.1;end_range=21202,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328357.1;locus_tag=LDO45_RS31070;partial=true;product=DUF2069 domain-containing protein;protein_id=WP_223965134.1;transl_table=11 ##sequence-region NZ_CAJZAS010000235.1 1 5106 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000235.1 RefSeq region 1 5106 . + . ID=NZ_CAJZAS010000235.1:1..5106;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_77 NZ_CAJZAS010000235.1 RefSeq gene 70 182 . - . ID=gene-LDO45_RS31075;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=LDO45_RS31075;old_locus_tag=BDI4_RRNA3 NZ_CAJZAS010000235.1 cmsearch rRNA 70 182 . - . ID=rna-LDO45_RS31075;Parent=gene-LDO45_RS31075;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO45_RS31075;product=5S ribosomal RNA NZ_CAJZAS010000235.1 cmsearch exon 70 182 . - . ID=exon-LDO45_RS31075-1;Parent=rna-LDO45_RS31075;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO45_RS31075;product=5S ribosomal RNA NZ_CAJZAS010000235.1 RefSeq gene 365 3246 . - . ID=gene-LDO45_RS31080;Name=LDO45_RS31080;gbkey=Gene;gene_biotype=rRNA;locus_tag=LDO45_RS31080;old_locus_tag=BDI4_RRNA2 NZ_CAJZAS010000235.1 cmsearch rRNA 365 3246 . - . ID=rna-LDO45_RS31080;Parent=gene-LDO45_RS31080;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO45_RS31080;product=23S ribosomal RNA NZ_CAJZAS010000235.1 cmsearch exon 365 3246 . - . ID=exon-LDO45_RS31080-1;Parent=rna-LDO45_RS31080;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO45_RS31080;product=23S ribosomal RNA NZ_CAJZAS010000235.1 RefSeq gene 3325 4857 . - . ID=gene-LDO45_RS31085;Name=LDO45_RS31085;gbkey=Gene;gene_biotype=rRNA;locus_tag=LDO45_RS31085;old_locus_tag=BDI4_RRNA1 NZ_CAJZAS010000235.1 cmsearch rRNA 3325 4857 . - . ID=rna-LDO45_RS31085;Parent=gene-LDO45_RS31085;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO45_RS31085;product=16S ribosomal RNA NZ_CAJZAS010000235.1 cmsearch exon 3325 4857 . - . ID=exon-LDO45_RS31085-1;Parent=rna-LDO45_RS31085;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO45_RS31085;product=16S ribosomal RNA ##sequence-region NZ_CAJZAS010000236.1 1 665 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000236.1 RefSeq region 1 665 . + . ID=NZ_CAJZAS010000236.1:1..665;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_78 NZ_CAJZAS010000236.1 RefSeq gene 1 104 . + . ID=gene-LDO45_RS31090;Name=LDO45_RS31090;gbkey=Gene;gene_biotype=rRNA;locus_tag=LDO45_RS31090;partial=true;start_range=.,1 NZ_CAJZAS010000236.1 cmsearch rRNA 1 104 . + . ID=rna-LDO45_RS31090;Parent=gene-LDO45_RS31090;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO45_RS31090;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_CAJZAS010000236.1 cmsearch exon 1 104 . + . ID=exon-LDO45_RS31090-1;Parent=rna-LDO45_RS31090;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO45_RS31090;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_CAJZAS010000236.1 RefSeq gene 168 244 . + . ID=gene-LDO45_RS31095;Name=LDO45_RS31095;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS31095;old_locus_tag=BDI4_TRNA24 NZ_CAJZAS010000236.1 tRNAscan-SE tRNA 168 244 . + . ID=rna-LDO45_RS31095;Parent=gene-LDO45_RS31095;anticodon=(pos:202..204);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS31095;product=tRNA-Ile NZ_CAJZAS010000236.1 tRNAscan-SE exon 168 244 . + . ID=exon-LDO45_RS31095-1;Parent=rna-LDO45_RS31095;anticodon=(pos:202..204);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS31095;product=tRNA-Ile NZ_CAJZAS010000236.1 RefSeq gene 284 359 . + . ID=gene-LDO45_RS31100;Name=LDO45_RS31100;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS31100;old_locus_tag=BDI4_TRNA25 NZ_CAJZAS010000236.1 tRNAscan-SE tRNA 284 359 . + . ID=rna-LDO45_RS31100;Parent=gene-LDO45_RS31100;anticodon=(pos:317..319);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS31100;product=tRNA-Ala NZ_CAJZAS010000236.1 tRNAscan-SE exon 284 359 . + . ID=exon-LDO45_RS31100-1;Parent=rna-LDO45_RS31100;anticodon=(pos:317..319);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS31100;product=tRNA-Ala ##sequence-region NZ_CAJZAS010000237.1 1 32401 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000237.1 RefSeq region 1 32401 . + . ID=NZ_CAJZAS010000237.1:1..32401;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_79 NZ_CAJZAS010000237.1 RefSeq pseudogene 1 600 . - . ID=gene-LDO45_RS31105;Name=cca;gbkey=Gene;gene=cca;gene_biotype=pseudogene;locus_tag=LDO45_RS31105;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000237.1 Protein Homology CDS 1 600 . - 0 ID=cds-LDO45_RS31105;Parent=gene-LDO45_RS31105;Note=catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template%3B phosphohydrolase activities include hydrolysis of pyrophosphate%2C 5'-nucleoside tri- and diphosphates%2C NADP%2C and 2'-AMP with the production of Pi%2C metal-dependent phosphodiesterase activity for 2'%2C3'-cAMP%2C 2'%2C3'-cGMP%2C and 2'%2C3'-cCMP%2C and hydrolysis 2'%2C3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides%3B these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;gene=cca;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658147.1;locus_tag=LDO45_RS31105;partial=true;product=multifunctional CCA tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 597 1244 . - . ID=gene-LDO45_RS31110;Name=LDO45_RS31110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31110;old_locus_tag=BDI4_790002 NZ_CAJZAS010000237.1 Protein Homology CDS 597 1244 . - 0 ID=cds-WP_223965136.1;Parent=gene-LDO45_RS31110;Dbxref=GenBank:WP_223965136.1;Name=WP_223965136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895787.1;locus_tag=LDO45_RS31110;product=glutathione S-transferase family protein;protein_id=WP_223965136.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 1299 2258 . - . ID=gene-LDO45_RS31115;Name=LDO45_RS31115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31115;old_locus_tag=BDI4_790003 NZ_CAJZAS010000237.1 Protein Homology CDS 1299 2258 . - 0 ID=cds-WP_223965137.1;Parent=gene-LDO45_RS31115;Dbxref=GenBank:WP_223965137.1;Name=WP_223965137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197236.1;locus_tag=LDO45_RS31115;product=complex I NDUFA9 subunit family protein;protein_id=WP_223965137.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 2416 4368 . - . ID=gene-LDO45_RS31120;Name=LDO45_RS31120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31120;old_locus_tag=BDI4_790004 NZ_CAJZAS010000237.1 Protein Homology CDS 2416 4368 . - 0 ID=cds-WP_059535065.1;Parent=gene-LDO45_RS31120;Dbxref=GenBank:WP_059535065.1;Name=WP_059535065.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602139.1;locus_tag=LDO45_RS31120;product=lytic transglycosylase domain-containing protein;protein_id=WP_059535065.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 4377 4985 . + . ID=gene-LDO45_RS31125;Name=LDO45_RS31125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31125;old_locus_tag=BDI4_790005 NZ_CAJZAS010000237.1 Protein Homology CDS 4377 4985 . + 0 ID=cds-WP_059691957.1;Parent=gene-LDO45_RS31125;Dbxref=GenBank:WP_059691957.1;Name=WP_059691957.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353482.1;locus_tag=LDO45_RS31125;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_059691957.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 5054 5566 . - . ID=gene-LDO45_RS31130;Name=LDO45_RS31130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31130;old_locus_tag=BDI4_790006 NZ_CAJZAS010000237.1 Protein Homology CDS 5054 5566 . - 0 ID=cds-WP_059535061.1;Parent=gene-LDO45_RS31130;Dbxref=GenBank:WP_059535061.1;Name=WP_059535061.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024208.1;locus_tag=LDO45_RS31130;product=winged helix DNA-binding protein;protein_id=WP_059535061.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 5715 6371 . + . ID=gene-LDO45_RS31135;Name=pxpB;gbkey=Gene;gene=pxpB;gene_biotype=protein_coding;locus_tag=LDO45_RS31135;old_locus_tag=BDI4_790008 NZ_CAJZAS010000237.1 Protein Homology CDS 5715 6371 . + 0 ID=cds-WP_223965138.1;Parent=gene-LDO45_RS31135;Dbxref=GenBank:WP_223965138.1;Name=WP_223965138.1;Ontology_term=GO:0005975,GO:0008152,GO:0017168;gbkey=CDS;gene=pxpB;go_function=5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886275.1;locus_tag=LDO45_RS31135;product=5-oxoprolinase subunit PxpB;protein_id=WP_223965138.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 6368 7435 . + . ID=gene-LDO45_RS31140;Name=LDO45_RS31140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31140;old_locus_tag=BDI4_790007 NZ_CAJZAS010000237.1 Protein Homology CDS 6368 7435 . + 0 ID=cds-WP_059691956.1;Parent=gene-LDO45_RS31140;Dbxref=GenBank:WP_059691956.1;Name=WP_059691956.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886276.1;locus_tag=LDO45_RS31140;product=biotin-dependent carboxyltransferase family protein;protein_id=WP_059691956.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 7491 8255 . + . ID=gene-LDO45_RS31145;Name=pxpA;gbkey=Gene;gene=pxpA;gene_biotype=protein_coding;locus_tag=LDO45_RS31145;old_locus_tag=BDI4_790009 NZ_CAJZAS010000237.1 Protein Homology CDS 7491 8255 . + 0 ID=cds-WP_059535055.1;Parent=gene-LDO45_RS31145;Dbxref=GenBank:WP_059535055.1;Name=WP_059535055.1;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;gene=pxpA;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886277.1;locus_tag=LDO45_RS31145;product=5-oxoprolinase subunit PxpA;protein_id=WP_059535055.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 8814 9959 . - . ID=gene-LDO45_RS31150;Name=LDO45_RS31150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31150;old_locus_tag=BDI4_790010 NZ_CAJZAS010000237.1 Protein Homology CDS 8814 9959 . - 0 ID=cds-WP_223965139.1;Parent=gene-LDO45_RS31150;Dbxref=GenBank:WP_223965139.1;Name=WP_223965139.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895779.1;locus_tag=LDO45_RS31150;product=TraB/GumN family protein;protein_id=WP_223965139.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 9952 10968 . - . ID=gene-LDO45_RS31155;Name=LDO45_RS31155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31155;old_locus_tag=BDI4_790011 NZ_CAJZAS010000237.1 Protein Homology CDS 9952 10968 . - 0 ID=cds-WP_059819921.1;Parent=gene-LDO45_RS31155;Dbxref=GenBank:WP_059819921.1;Name=WP_059819921.1;Ontology_term=GO:0015833,GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004523051.1;locus_tag=LDO45_RS31155;product=peptide ABC transporter ATP-binding protein;protein_id=WP_059819921.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 10965 11963 . - . ID=gene-LDO45_RS31160;Name=LDO45_RS31160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31160;old_locus_tag=BDI4_790012 NZ_CAJZAS010000237.1 Protein Homology CDS 10965 11963 . - 0 ID=cds-WP_059535050.1;Parent=gene-LDO45_RS31160;Dbxref=GenBank:WP_059535050.1;Name=WP_059535050.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477543.1;locus_tag=LDO45_RS31160;product=ABC transporter ATP-binding protein;protein_id=WP_059535050.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 11965 12882 . - . ID=gene-LDO45_RS31165;Name=LDO45_RS31165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31165;old_locus_tag=BDI4_790013 NZ_CAJZAS010000237.1 Protein Homology CDS 11965 12882 . - 0 ID=cds-WP_059535048.1;Parent=gene-LDO45_RS31165;Dbxref=GenBank:WP_059535048.1;Name=WP_059535048.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489141.1;locus_tag=LDO45_RS31165;product=ABC transporter permease subunit;protein_id=WP_059535048.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 12887 13897 . - . ID=gene-LDO45_RS31170;Name=LDO45_RS31170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31170;old_locus_tag=BDI4_790014 NZ_CAJZAS010000237.1 Protein Homology CDS 12887 13897 . - 0 ID=cds-WP_059691952.1;Parent=gene-LDO45_RS31170;Dbxref=GenBank:WP_059691952.1;Name=WP_059691952.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016976247.1;locus_tag=LDO45_RS31170;product=ABC transporter permease subunit;protein_id=WP_059691952.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 14016 15644 . - . ID=gene-LDO45_RS31175;Name=LDO45_RS31175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31175;old_locus_tag=BDI4_790015 NZ_CAJZAS010000237.1 Protein Homology CDS 14016 15644 . - 0 ID=cds-WP_059535044.1;Parent=gene-LDO45_RS31175;Dbxref=GenBank:WP_059535044.1;Name=WP_059535044.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006417151.1;locus_tag=LDO45_RS31175;product=ABC transporter substrate-binding protein;protein_id=WP_059535044.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 15957 17264 . - . ID=gene-LDO45_RS31180;Name=LDO45_RS31180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31180;old_locus_tag=BDI4_790017 NZ_CAJZAS010000237.1 Protein Homology CDS 15957 17264 . - 0 ID=cds-WP_059703177.1;Parent=gene-LDO45_RS31180;Dbxref=GenBank:WP_059703177.1;Name=WP_059703177.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895773.1;locus_tag=LDO45_RS31180;product=MFS transporter;protein_id=WP_059703177.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 17665 18864 . + . ID=gene-LDO45_RS31185;Name=LDO45_RS31185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31185;old_locus_tag=BDI4_790018 NZ_CAJZAS010000237.1 Protein Homology CDS 17665 18864 . + 0 ID=cds-WP_223965140.1;Parent=gene-LDO45_RS31185;Dbxref=GenBank:WP_223965140.1;Name=WP_223965140.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039427.4;locus_tag=LDO45_RS31185;product=DUF6402 family protein;protein_id=WP_223965140.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 18861 19376 . + . ID=gene-LDO45_RS31190;Name=LDO45_RS31190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31190;old_locus_tag=BDI4_790019 NZ_CAJZAS010000237.1 GeneMarkS-2+ CDS 18861 19376 . + 0 ID=cds-WP_223965141.1;Parent=gene-LDO45_RS31190;Dbxref=GenBank:WP_223965141.1;Name=WP_223965141.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31190;product=hypothetical protein;protein_id=WP_223965141.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 19553 19864 . - . ID=gene-LDO45_RS31195;Name=LDO45_RS31195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31195;old_locus_tag=BDI4_790021 NZ_CAJZAS010000237.1 Protein Homology CDS 19553 19864 . - 0 ID=cds-WP_059535040.1;Parent=gene-LDO45_RS31195;Dbxref=GenBank:WP_059535040.1;Name=WP_059535040.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895772.1;locus_tag=LDO45_RS31195;product=high-potential iron-sulfur protein;protein_id=WP_059535040.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 20014 21123 . - . ID=gene-LDO45_RS31200;Name=LDO45_RS31200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31200;old_locus_tag=BDI4_790022 NZ_CAJZAS010000237.1 Protein Homology CDS 20014 21123 . - 0 ID=cds-WP_223965142.1;Parent=gene-LDO45_RS31200;Dbxref=GenBank:WP_223965142.1;Name=WP_223965142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546432.1;locus_tag=LDO45_RS31200;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_223965142.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 21277 22257 . - . ID=gene-LDO45_RS31205;Name=LDO45_RS31205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31205;old_locus_tag=BDI4_790023 NZ_CAJZAS010000237.1 Protein Homology CDS 21277 22257 . - 0 ID=cds-WP_059535036.1;Parent=gene-LDO45_RS31205;Dbxref=GenBank:WP_059535036.1;Name=WP_059535036.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011857941.1;locus_tag=LDO45_RS31205;product=AAA family ATPase;protein_id=WP_059535036.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 22485 23204 . + . ID=gene-LDO45_RS31210;Name=LDO45_RS31210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31210;old_locus_tag=BDI4_790024 NZ_CAJZAS010000237.1 Protein Homology CDS 22485 23204 . + 0 ID=cds-WP_223965143.1;Parent=gene-LDO45_RS31210;Dbxref=GenBank:WP_223965143.1;Name=WP_223965143.1;Ontology_term=GO:0016491,GO:0016657;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,obsolete oxidoreductase activity%2C acting on NAD(P)H%2C nitrogenous group as acceptor|0016657||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329402.1;locus_tag=LDO45_RS31210;product=nitroreductase;protein_id=WP_223965143.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 23352 23840 . + . ID=gene-LDO45_RS31215;Name=LDO45_RS31215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31215;old_locus_tag=BDI4_790026 NZ_CAJZAS010000237.1 Protein Homology CDS 23352 23840 . + 0 ID=cds-WP_059691948.1;Parent=gene-LDO45_RS31215;Dbxref=GenBank:WP_059691948.1;Name=WP_059691948.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546435.1;locus_tag=LDO45_RS31215;product=hypothetical protein;protein_id=WP_059691948.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 23846 24661 . + . ID=gene-LDO45_RS31220;Name=LDO45_RS31220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31220;old_locus_tag=BDI4_790025 NZ_CAJZAS010000237.1 Protein Homology CDS 23846 24661 . + 0 ID=cds-WP_059448471.1;Parent=gene-LDO45_RS31220;Dbxref=GenBank:WP_059448471.1;Name=WP_059448471.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353499.1;locus_tag=LDO45_RS31220;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_059448471.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 24936 25706 . + . ID=gene-LDO45_RS31225;Name=LDO45_RS31225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31225;old_locus_tag=BDI4_790027 NZ_CAJZAS010000237.1 Protein Homology CDS 24936 25706 . + 0 ID=cds-WP_059535031.1;Parent=gene-LDO45_RS31225;Dbxref=GenBank:WP_059535031.1;Name=WP_059535031.1;Ontology_term=GO:0004324;gbkey=CDS;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477532.1;locus_tag=LDO45_RS31225;product=ferredoxin--NADP reductase;protein_id=WP_059535031.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 26122 26937 . + . ID=gene-LDO45_RS31230;Name=rqpS;gbkey=Gene;gene=rqpS;gene_biotype=protein_coding;locus_tag=LDO45_RS31230;old_locus_tag=BDI4_790029 NZ_CAJZAS010000237.1 Protein Homology CDS 26122 26937 . + 0 ID=cds-WP_223965144.1;Parent=gene-LDO45_RS31230;Dbxref=GenBank:WP_223965144.1;Name=WP_223965144.1;gbkey=CDS;gene=rqpS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482035.1;locus_tag=LDO45_RS31230;product=quorum system sensor histidine kinase RqpS;protein_id=WP_223965144.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 26945 27601 . + . ID=gene-LDO45_RS31235;Name=rqpR;gbkey=Gene;gene=rqpR;gene_biotype=protein_coding;locus_tag=LDO45_RS31235;old_locus_tag=BDI4_790030 NZ_CAJZAS010000237.1 Protein Homology CDS 26945 27601 . + 0 ID=cds-WP_059535026.1;Parent=gene-LDO45_RS31235;Dbxref=GenBank:WP_059535026.1;Name=WP_059535026.1;Note=The RqpSR system (Regulating Quorum sensing and Pathogenicity Sensor kinase and Response regulator) co-occurs with and modulates the expression of cis-2-dodecenoic acid quorum-sensing systems.;gbkey=CDS;gene=rqpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477530.1;locus_tag=LDO45_RS31235;product=response regulator transcription factor RqpR;protein_id=WP_059535026.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 27800 29206 . + . ID=gene-LDO45_RS31240;Name=LDO45_RS31240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31240;old_locus_tag=BDI4_790031 NZ_CAJZAS010000237.1 Protein Homology CDS 27800 29206 . + 0 ID=cds-WP_059535024.1;Parent=gene-LDO45_RS31240;Dbxref=GenBank:WP_059535024.1;Name=WP_059535024.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334563.1;locus_tag=LDO45_RS31240;product=amino acid permease;protein_id=WP_059535024.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 29514 30539 . + . ID=gene-LDO45_RS31245;Name=LDO45_RS31245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31245;old_locus_tag=BDI4_790032 NZ_CAJZAS010000237.1 Protein Homology CDS 29514 30539 . + 0 ID=cds-WP_059607548.1;Parent=gene-LDO45_RS31245;Dbxref=GenBank:WP_059607548.1;Name=WP_059607548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534269.1;locus_tag=LDO45_RS31245;product=XdhC family protein;protein_id=WP_059607548.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 30621 31355 . - . ID=gene-LDO45_RS31250;Name=LDO45_RS31250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31250;old_locus_tag=BDI4_790033 NZ_CAJZAS010000237.1 Protein Homology CDS 30621 31355 . - 0 ID=cds-WP_223965145.1;Parent=gene-LDO45_RS31250;Dbxref=GenBank:WP_223965145.1;Name=WP_223965145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006402716.1;locus_tag=LDO45_RS31250;product=PepSY-associated TM helix domain-containing protein;protein_id=WP_223965145.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 31622 31942 . - . ID=gene-LDO45_RS31255;Name=LDO45_RS31255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31255;old_locus_tag=BDI4_790035 NZ_CAJZAS010000237.1 Protein Homology CDS 31622 31942 . - 0 ID=cds-WP_059703167.1;Parent=gene-LDO45_RS31255;Dbxref=GenBank:WP_059703167.1;Name=WP_059703167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658173.1;locus_tag=LDO45_RS31255;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;protein_id=WP_059703167.1;transl_table=11 NZ_CAJZAS010000237.1 RefSeq gene 31939 32401 . - . ID=gene-LDO45_RS31260;Name=LDO45_RS31260;end_range=32401,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31260;partial=true NZ_CAJZAS010000237.1 Protein Homology CDS 31939 32401 . - 1 ID=cds-WP_223965146.1;Parent=gene-LDO45_RS31260;Dbxref=GenBank:WP_223965146.1;Name=WP_223965146.1;end_range=32401,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364933.1;locus_tag=LDO45_RS31260;partial=true;product=flagellar hook-length control protein FliK;protein_id=WP_223965146.1;transl_table=11 ##sequence-region NZ_CAJZAS010000238.1 1 21633 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000238.1 RefSeq region 1 21633 . + . ID=NZ_CAJZAS010000238.1:1..21633;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_8 NZ_CAJZAS010000238.1 RefSeq gene 163 981 . + . ID=gene-LDO45_RS31265;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=LDO45_RS31265;old_locus_tag=BDI4_80001 NZ_CAJZAS010000238.1 Protein Homology CDS 163 981 . + 0 ID=cds-WP_253074757.1;Parent=gene-LDO45_RS31265;Dbxref=GenBank:WP_253074757.1;Name=WP_253074757.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497721.1;locus_tag=LDO45_RS31265;product=GTPase Era;protein_id=WP_253074757.1;transl_table=11 NZ_CAJZAS010000238.1 RefSeq gene 968 1807 . + . ID=gene-LDO45_RS31270;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=LDO45_RS31270;old_locus_tag=BDI4_80002 NZ_CAJZAS010000238.1 Protein Homology CDS 968 1807 . + 0 ID=cds-WP_014897645.1;Parent=gene-LDO45_RS31270;Dbxref=GenBank:WP_014897645.1;Name=WP_014897645.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011351416.1;locus_tag=LDO45_RS31270;product=DNA repair protein RecO;protein_id=WP_014897645.1;transl_table=11 NZ_CAJZAS010000238.1 RefSeq gene 1804 2580 . + . ID=gene-LDO45_RS31275;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=LDO45_RS31275;old_locus_tag=BDI4_80003 NZ_CAJZAS010000238.1 Protein Homology CDS 1804 2580 . + 0 ID=cds-WP_059447973.1;Parent=gene-LDO45_RS31275;Dbxref=GenBank:WP_059447973.1;Name=WP_059447973.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762396.1;locus_tag=LDO45_RS31275;product=pyridoxine 5'-phosphate synthase;protein_id=WP_059447973.1;transl_table=11 NZ_CAJZAS010000238.1 RefSeq gene 2650 3090 . + . ID=gene-LDO45_RS31280;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=LDO45_RS31280;old_locus_tag=BDI4_80004 NZ_CAJZAS010000238.1 Protein Homology CDS 2650 3090 . + 0 ID=cds-WP_059691088.1;Parent=gene-LDO45_RS31280;Dbxref=GenBank:WP_059691088.1;Name=WP_059691088.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762395.1;locus_tag=LDO45_RS31280;product=holo-ACP synthase;protein_id=WP_059691088.1;transl_table=11 NZ_CAJZAS010000238.1 RefSeq gene 3107 4135 . + . ID=gene-LDO45_RS31285;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=LDO45_RS31285;old_locus_tag=BDI4_80005 NZ_CAJZAS010000238.1 Protein Homology CDS 3107 4135 . + 0 ID=cds-WP_175907347.1;Parent=gene-LDO45_RS31285;Dbxref=GenBank:WP_175907347.1;Name=WP_175907347.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897642.1;locus_tag=LDO45_RS31285;product=beta-N-acetylhexosaminidase;protein_id=WP_175907347.1;transl_table=11 NZ_CAJZAS010000238.1 RefSeq gene 4308 5693 . - . ID=gene-LDO45_RS31290;Name=LDO45_RS31290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31290;old_locus_tag=BDI4_80006 NZ_CAJZAS010000238.1 Protein Homology CDS 4308 5693 . - 0 ID=cds-WP_059523708.1;Parent=gene-LDO45_RS31290;Dbxref=GenBank:WP_059523708.1;Name=WP_059523708.1;Ontology_term=GO:0006355,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401253.1;locus_tag=LDO45_RS31290;product=sigma-54 dependent transcriptional regulator;protein_id=WP_059523708.1;transl_table=11 NZ_CAJZAS010000238.1 RefSeq gene 5965 6522 . - . ID=gene-LDO45_RS31295;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=LDO45_RS31295;old_locus_tag=BDI4_80007 NZ_CAJZAS010000238.1 Protein Homology CDS 5965 6522 . - 0 ID=cds-WP_034206788.1;Parent=gene-LDO45_RS31295;Dbxref=GenBank:WP_034206788.1;Name=WP_034206788.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011883975.1;locus_tag=LDO45_RS31295;product=elongation factor P;protein_id=WP_034206788.1;transl_table=11 NZ_CAJZAS010000238.1 RefSeq gene 6661 7848 . - . ID=gene-LDO45_RS31300;Name=earP;gbkey=Gene;gene=earP;gene_biotype=protein_coding;locus_tag=LDO45_RS31300;old_locus_tag=BDI4_80008 NZ_CAJZAS010000238.1 Protein Homology CDS 6661 7848 . - 0 ID=cds-WP_223965148.1;Parent=gene-LDO45_RS31300;Dbxref=GenBank:WP_223965148.1;Name=WP_223965148.1;Ontology_term=GO:0106361;gbkey=CDS;gene=earP;go_function=protein-arginine rhamnosyltransferase activity|0106361||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751870.1;locus_tag=LDO45_RS31300;product=elongation factor P maturation arginine rhamnosyltransferase EarP;protein_id=WP_223965148.1;transl_table=11 NZ_CAJZAS010000238.1 RefSeq gene 7925 9955 . + . ID=gene-LDO45_RS31305;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=LDO45_RS31305;old_locus_tag=BDI4_80009 NZ_CAJZAS010000238.1 Protein Homology CDS 7925 9955 . + 0 ID=cds-WP_059523705.1;Parent=gene-LDO45_RS31305;Dbxref=GenBank:WP_059523705.1;Name=WP_059523705.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544950.1;locus_tag=LDO45_RS31305;product=excinuclease ABC subunit UvrC;protein_id=WP_059523705.1;transl_table=11 NZ_CAJZAS010000238.1 RefSeq gene 10055 10642 . + . ID=gene-LDO45_RS31310;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=LDO45_RS31310;old_locus_tag=BDI4_80010 NZ_CAJZAS010000238.1 Protein Homology CDS 10055 10642 . + 0 ID=cds-WP_006757520.1;Parent=gene-LDO45_RS31310;Dbxref=GenBank:WP_006757520.1;Name=WP_006757520.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544951.1;locus_tag=LDO45_RS31310;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_006757520.1;transl_table=11 NZ_CAJZAS010000238.1 RefSeq gene 10787 10862 . + . ID=gene-LDO45_RS31315;Name=LDO45_RS31315;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS31315;old_locus_tag=BDI4_TRNA5 NZ_CAJZAS010000238.1 tRNAscan-SE tRNA 10787 10862 . + . ID=rna-LDO45_RS31315;Parent=gene-LDO45_RS31315;anticodon=(pos:10820..10822);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS31315;product=tRNA-Gly NZ_CAJZAS010000238.1 tRNAscan-SE exon 10787 10862 . + . ID=exon-LDO45_RS31315-1;Parent=rna-LDO45_RS31315;anticodon=(pos:10820..10822);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS31315;product=tRNA-Gly NZ_CAJZAS010000238.1 RefSeq gene 10916 10991 . + . ID=gene-LDO45_RS31320;Name=LDO45_RS31320;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS31320;old_locus_tag=BDI4_TRNA6 NZ_CAJZAS010000238.1 tRNAscan-SE tRNA 10916 10991 . + . ID=rna-LDO45_RS31320;Parent=gene-LDO45_RS31320;anticodon=(pos:10949..10951);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS31320;product=tRNA-Gly NZ_CAJZAS010000238.1 tRNAscan-SE exon 10916 10991 . + . ID=exon-LDO45_RS31320-1;Parent=rna-LDO45_RS31320;anticodon=(pos:10949..10951);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS31320;product=tRNA-Gly NZ_CAJZAS010000238.1 RefSeq gene 11043 11118 . + . ID=gene-LDO45_RS31325;Name=LDO45_RS31325;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS31325;old_locus_tag=BDI4_TRNA7 NZ_CAJZAS010000238.1 tRNAscan-SE tRNA 11043 11118 . + . ID=rna-LDO45_RS31325;Parent=gene-LDO45_RS31325;anticodon=(pos:11076..11078);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS31325;product=tRNA-Gly NZ_CAJZAS010000238.1 tRNAscan-SE exon 11043 11118 . + . ID=exon-LDO45_RS31325-1;Parent=rna-LDO45_RS31325;anticodon=(pos:11076..11078);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS31325;product=tRNA-Gly NZ_CAJZAS010000238.1 RefSeq gene 11220 11293 . + . ID=gene-LDO45_RS31330;Name=LDO45_RS31330;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS31330;old_locus_tag=BDI4_TRNA8 NZ_CAJZAS010000238.1 tRNAscan-SE tRNA 11220 11293 . + . ID=rna-LDO45_RS31330;Parent=gene-LDO45_RS31330;anticodon=(pos:11252..11254);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS31330;product=tRNA-Cys NZ_CAJZAS010000238.1 tRNAscan-SE exon 11220 11293 . + . ID=exon-LDO45_RS31330-1;Parent=rna-LDO45_RS31330;anticodon=(pos:11252..11254);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS31330;product=tRNA-Cys NZ_CAJZAS010000238.1 RefSeq gene 11584 12132 . - . ID=gene-LDO45_RS31335;Name=LDO45_RS31335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31335;old_locus_tag=BDI4_80012 NZ_CAJZAS010000238.1 Protein Homology CDS 11584 12132 . - 0 ID=cds-WP_059691094.1;Parent=gene-LDO45_RS31335;Dbxref=GenBank:WP_059691094.1;Name=WP_059691094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482197.1;locus_tag=LDO45_RS31335;product=GNAT family N-acetyltransferase;protein_id=WP_059691094.1;transl_table=11 NZ_CAJZAS010000238.1 RefSeq gene 12129 12788 . - . ID=gene-LDO45_RS31340;Name=LDO45_RS31340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31340;old_locus_tag=BDI4_80013 NZ_CAJZAS010000238.1 Protein Homology CDS 12129 12788 . - 0 ID=cds-WP_223965149.1;Parent=gene-LDO45_RS31340;Dbxref=GenBank:WP_223965149.1;Name=WP_223965149.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897633.1;locus_tag=LDO45_RS31340;product=helix-turn-helix domain-containing protein;protein_id=WP_223965149.1;transl_table=11 NZ_CAJZAS010000238.1 RefSeq gene 12938 13174 . + . ID=gene-LDO45_RS31345;Name=LDO45_RS31345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31345;old_locus_tag=BDI4_80015 NZ_CAJZAS010000238.1 Protein Homology CDS 12938 13174 . + 0 ID=cds-WP_223965150.1;Parent=gene-LDO45_RS31345;Dbxref=GenBank:WP_223965150.1;Name=WP_223965150.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014722737.1;locus_tag=LDO45_RS31345;product=ParD-like family protein;protein_id=WP_223965150.1;transl_table=11 NZ_CAJZAS010000238.1 RefSeq gene 13174 13980 . + . ID=gene-LDO45_RS31350;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=LDO45_RS31350;old_locus_tag=BDI4_80016 NZ_CAJZAS010000238.1 Protein Homology CDS 13174 13980 . + 0 ID=cds-WP_059523698.1;Parent=gene-LDO45_RS31350;Dbxref=GenBank:WP_059523698.1;Name=WP_059523698.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751860.1;locus_tag=LDO45_RS31350;product=type I methionyl aminopeptidase;protein_id=WP_059523698.1;transl_table=11 NZ_CAJZAS010000238.1 RefSeq gene 14056 14559 . - . ID=gene-LDO45_RS31355;Name=LDO45_RS31355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31355;old_locus_tag=BDI4_80017 NZ_CAJZAS010000238.1 Protein Homology CDS 14056 14559 . - 0 ID=cds-WP_223965151.1;Parent=gene-LDO45_RS31355;Dbxref=GenBank:WP_223965151.1;Name=WP_223965151.1;Ontology_term=GO:0005515,GO:0033745;gbkey=CDS;go_function=protein binding|0005515||IEA,L-methionine-(R)-S-oxide reductase activity|0033745||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363421.1;locus_tag=LDO45_RS31355;product=GAF domain-containing protein;protein_id=WP_223965151.1;transl_table=11 NZ_CAJZAS010000238.1 RefSeq gene 14674 15591 . - . ID=gene-LDO45_RS31360;Name=LDO45_RS31360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31360;old_locus_tag=BDI4_80018 NZ_CAJZAS010000238.1 Protein Homology CDS 14674 15591 . - 0 ID=cds-WP_059691097.1;Parent=gene-LDO45_RS31360;Dbxref=GenBank:WP_059691097.1;Name=WP_059691097.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333193.1;locus_tag=LDO45_RS31360;product=LysR family transcriptional regulator;protein_id=WP_059691097.1;transl_table=11 NZ_CAJZAS010000238.1 RefSeq gene 15702 16568 . + . ID=gene-LDO45_RS31365;Name=LDO45_RS31365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31365;old_locus_tag=BDI4_80019 NZ_CAJZAS010000238.1 Protein Homology CDS 15702 16568 . + 0 ID=cds-WP_059523692.1;Parent=gene-LDO45_RS31365;Dbxref=GenBank:WP_059523692.1;Name=WP_059523692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004532092.1;locus_tag=LDO45_RS31365;product=pirin family protein;protein_id=WP_059523692.1;transl_table=11 NZ_CAJZAS010000238.1 RefSeq gene 16695 17186 . + . ID=gene-LDO45_RS31370;Name=LDO45_RS31370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31370;old_locus_tag=BDI4_80020 NZ_CAJZAS010000238.1 Protein Homology CDS 16695 17186 . + 0 ID=cds-WP_059523690.1;Parent=gene-LDO45_RS31370;Dbxref=GenBank:WP_059523690.1;Name=WP_059523690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897627.1;locus_tag=LDO45_RS31370;product=GNAT family N-acetyltransferase;protein_id=WP_059523690.1;transl_table=11 NZ_CAJZAS010000238.1 RefSeq gene 17199 18071 . - . ID=gene-LDO45_RS31375;Name=LDO45_RS31375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31375;old_locus_tag=BDI4_80021 NZ_CAJZAS010000238.1 Protein Homology CDS 17199 18071 . - 0 ID=cds-WP_059691099.1;Parent=gene-LDO45_RS31375;Dbxref=GenBank:WP_059691099.1;Name=WP_059691099.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009955133.1;locus_tag=LDO45_RS31375;product=cytochrome c oxidase assembly protein;protein_id=WP_059691099.1;transl_table=11 NZ_CAJZAS010000238.1 RefSeq gene 18082 18522 . - . ID=gene-LDO45_RS31380;Name=LDO45_RS31380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31380;old_locus_tag=BDI4_80022 NZ_CAJZAS010000238.1 Protein Homology CDS 18082 18522 . - 0 ID=cds-WP_059691100.1;Parent=gene-LDO45_RS31380;Dbxref=GenBank:WP_059691100.1;Name=WP_059691100.1;Ontology_term=GO:0016531;gbkey=CDS;go_function=copper chaperone activity|0016531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014897625.1;locus_tag=LDO45_RS31380;product=copper chaperone PCu(A)C;protein_id=WP_059691100.1;transl_table=11 NZ_CAJZAS010000238.1 RefSeq gene 18531 19175 . - . ID=gene-LDO45_RS31385;Name=LDO45_RS31385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31385;old_locus_tag=BDI4_80023 NZ_CAJZAS010000238.1 Protein Homology CDS 18531 19175 . - 0 ID=cds-WP_223965152.1;Parent=gene-LDO45_RS31385;Dbxref=GenBank:WP_223965152.1;Name=WP_223965152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544964.1;locus_tag=LDO45_RS31385;product=SCO family protein;protein_id=WP_223965152.1;transl_table=11 NZ_CAJZAS010000238.1 RefSeq gene 19459 20211 . + . ID=gene-LDO45_RS31390;Name=otsB;gbkey=Gene;gene=otsB;gene_biotype=protein_coding;locus_tag=LDO45_RS31390;old_locus_tag=BDI4_80024 NZ_CAJZAS010000238.1 Protein Homology CDS 19459 20211 . + 0 ID=cds-WP_059523682.1;Parent=gene-LDO45_RS31390;Dbxref=GenBank:WP_059523682.1;Name=WP_059523682.1;Ontology_term=GO:0005992,GO:0004805;gbkey=CDS;gene=otsB;go_function=trehalose-phosphatase activity|0004805||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213775.1;locus_tag=LDO45_RS31390;product=trehalose-phosphatase;protein_id=WP_059523682.1;transl_table=11 NZ_CAJZAS010000238.1 RefSeq gene 20208 21584 . + . ID=gene-LDO45_RS31395;Name=otsA;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=LDO45_RS31395;old_locus_tag=BDI4_80025 NZ_CAJZAS010000238.1 Protein Homology CDS 20208 21584 . + 0 ID=cds-WP_223965153.1;Parent=gene-LDO45_RS31395;Dbxref=GenBank:WP_223965153.1;Name=WP_223965153.1;Ontology_term=GO:0005992,GO:0003825;gbkey=CDS;gene=otsA;go_function=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming) activity|0003825||IEA;go_process=trehalose biosynthetic process|0005992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012363428.1;locus_tag=LDO45_RS31395;product=alpha%2Calpha-trehalose-phosphate synthase (UDP-forming);protein_id=WP_223965153.1;transl_table=11 ##sequence-region NZ_CAJZAS010000239.1 1 19030 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000239.1 RefSeq region 1 19030 . + . ID=NZ_CAJZAS010000239.1:1..19030;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_80 NZ_CAJZAS010000239.1 RefSeq gene 149 568 . - . ID=gene-LDO45_RS31400;Name=LDO45_RS31400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31400;old_locus_tag=BDI4_800002 NZ_CAJZAS010000239.1 Protein Homology CDS 149 568 . - 0 ID=cds-WP_223965154.1;Parent=gene-LDO45_RS31400;Dbxref=GenBank:WP_223965154.1;Name=WP_223965154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008922784.1;locus_tag=LDO45_RS31400;product=DUF4279 domain-containing protein;protein_id=WP_223965154.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 802 1104 . - . ID=gene-LDO45_RS31405;Name=LDO45_RS31405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31405;old_locus_tag=BDI4_800003 NZ_CAJZAS010000239.1 Protein Homology CDS 802 1104 . - 0 ID=cds-WP_223965155.1;Parent=gene-LDO45_RS31405;Dbxref=GenBank:WP_223965155.1;Name=WP_223965155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008919150.1;locus_tag=LDO45_RS31405;product=hypothetical protein;protein_id=WP_223965155.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 1104 2141 . - . ID=gene-LDO45_RS31410;Name=LDO45_RS31410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31410;old_locus_tag=BDI4_800004 NZ_CAJZAS010000239.1 Protein Homology CDS 1104 2141 . - 0 ID=cds-WP_223965156.1;Parent=gene-LDO45_RS31410;Dbxref=GenBank:WP_223965156.1;Name=WP_223965156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006052631.1;locus_tag=LDO45_RS31410;product=hypothetical protein;protein_id=WP_223965156.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 2280 2855 . - . ID=gene-LDO45_RS31415;Name=LDO45_RS31415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31415;old_locus_tag=BDI4_800006 NZ_CAJZAS010000239.1 Protein Homology CDS 2280 2855 . - 0 ID=cds-WP_223965157.1;Parent=gene-LDO45_RS31415;Dbxref=GenBank:WP_223965157.1;Name=WP_223965157.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019717971.1;locus_tag=LDO45_RS31415;product=lipase;protein_id=WP_223965157.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 2852 3337 . - . ID=gene-LDO45_RS31420;Name=LDO45_RS31420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31420;old_locus_tag=BDI4_800007 NZ_CAJZAS010000239.1 Protein Homology CDS 2852 3337 . - 0 ID=cds-WP_223965158.1;Parent=gene-LDO45_RS31420;Dbxref=GenBank:WP_223965158.1;Name=WP_223965158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015876015.1;locus_tag=LDO45_RS31420;product=hypothetical protein;protein_id=WP_223965158.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 3384 3767 . - . ID=gene-LDO45_RS31425;Name=LDO45_RS31425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31425;old_locus_tag=BDI4_800008 NZ_CAJZAS010000239.1 GeneMarkS-2+ CDS 3384 3767 . - 0 ID=cds-WP_223965159.1;Parent=gene-LDO45_RS31425;Dbxref=GenBank:WP_223965159.1;Name=WP_223965159.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31425;product=hypothetical protein;protein_id=WP_223965159.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 3842 4291 . - . ID=gene-LDO45_RS31430;Name=LDO45_RS31430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31430;old_locus_tag=BDI4_800009 NZ_CAJZAS010000239.1 Protein Homology CDS 3842 4291 . - 0 ID=cds-WP_223965160.1;Parent=gene-LDO45_RS31430;Dbxref=GenBank:WP_223965160.1;Name=WP_223965160.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013954.5;locus_tag=LDO45_RS31430;product=glycoside hydrolase family 73 protein;protein_id=WP_223965160.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 4304 4486 . - . ID=gene-LDO45_RS31435;Name=LDO45_RS31435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31435;old_locus_tag=BDI4_800010 NZ_CAJZAS010000239.1 Protein Homology CDS 4304 4486 . - 0 ID=cds-WP_223965161.1;Parent=gene-LDO45_RS31435;Dbxref=GenBank:WP_223965161.1;Name=WP_223965161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495243.1;locus_tag=LDO45_RS31435;product=hypothetical protein;protein_id=WP_223965161.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 4538 6085 . - . ID=gene-LDO45_RS31440;Name=LDO45_RS31440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31440;old_locus_tag=BDI4_800011 NZ_CAJZAS010000239.1 Protein Homology CDS 4538 6085 . - 0 ID=cds-WP_223965162.1;Parent=gene-LDO45_RS31440;Dbxref=GenBank:WP_223965162.1;Name=WP_223965162.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005880260.1;locus_tag=LDO45_RS31440;product=hypothetical protein;protein_id=WP_223965162.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 6103 6906 . - . ID=gene-LDO45_RS31445;Name=LDO45_RS31445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31445;old_locus_tag=BDI4_800012 NZ_CAJZAS010000239.1 Protein Homology CDS 6103 6906 . - 0 ID=cds-WP_223965163.1;Parent=gene-LDO45_RS31445;Dbxref=GenBank:WP_223965163.1;Name=WP_223965163.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025659.5;locus_tag=LDO45_RS31445;product=DUF4376 domain-containing protein;protein_id=WP_223965163.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 6912 8030 . - . ID=gene-LDO45_RS31450;Name=LDO45_RS31450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31450;old_locus_tag=BDI4_800013 NZ_CAJZAS010000239.1 Protein Homology CDS 6912 8030 . - 0 ID=cds-WP_223965164.1;Parent=gene-LDO45_RS31450;Dbxref=GenBank:WP_223965164.1;Name=WP_223965164.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019126.5;locus_tag=LDO45_RS31450;product=tail fiber protein;protein_id=WP_223965164.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 8020 8697 . - . ID=gene-LDO45_RS31455;Name=LDO45_RS31455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31455;old_locus_tag=BDI4_800014 NZ_CAJZAS010000239.1 Protein Homology CDS 8020 8697 . - 0 ID=cds-WP_223965165.1;Parent=gene-LDO45_RS31455;Dbxref=GenBank:WP_223965165.1;Name=WP_223965165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013395248.1;locus_tag=LDO45_RS31455;product=DUF2612 domain-containing protein;protein_id=WP_223965165.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 8700 9914 . - . ID=gene-LDO45_RS31460;Name=LDO45_RS31460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31460;old_locus_tag=BDI4_800015 NZ_CAJZAS010000239.1 Protein Homology CDS 8700 9914 . - 0 ID=cds-WP_223965166.1;Parent=gene-LDO45_RS31460;Dbxref=GenBank:WP_223965166.1;Name=WP_223965166.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019573366.1;locus_tag=LDO45_RS31460;product=baseplate J/gp47 family protein;protein_id=WP_223965166.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 9914 10264 . - . ID=gene-LDO45_RS31465;Name=LDO45_RS31465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31465;old_locus_tag=BDI4_800016 NZ_CAJZAS010000239.1 Protein Homology CDS 9914 10264 . - 0 ID=cds-WP_223965167.1;Parent=gene-LDO45_RS31465;Dbxref=GenBank:WP_223965167.1;Name=WP_223965167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007181685.1;locus_tag=LDO45_RS31465;product=hypothetical protein;protein_id=WP_223965167.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 10349 11092 . - . ID=gene-LDO45_RS31470;Name=LDO45_RS31470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31470;old_locus_tag=BDI4_800017 NZ_CAJZAS010000239.1 GeneMarkS-2+ CDS 10349 11092 . - 0 ID=cds-WP_223965168.1;Parent=gene-LDO45_RS31470;Dbxref=GenBank:WP_223965168.1;Name=WP_223965168.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31470;product=Gp138 family membrane-puncturing spike protein;protein_id=WP_223965168.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 11082 11963 . - . ID=gene-LDO45_RS31475;Name=LDO45_RS31475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31475;old_locus_tag=BDI4_800018 NZ_CAJZAS010000239.1 Protein Homology CDS 11082 11963 . - 0 ID=cds-WP_223965169.1;Parent=gene-LDO45_RS31475;Dbxref=GenBank:WP_223965169.1;Name=WP_223965169.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046911.1;locus_tag=LDO45_RS31475;product=hypothetical protein;protein_id=WP_223965169.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 11960 12256 . - . ID=gene-LDO45_RS31480;Name=LDO45_RS31480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31480;old_locus_tag=BDI4_800019 NZ_CAJZAS010000239.1 Protein Homology CDS 11960 12256 . - 0 ID=cds-WP_223965170.1;Parent=gene-LDO45_RS31480;Dbxref=GenBank:WP_223965170.1;Name=WP_223965170.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007181682.1;locus_tag=LDO45_RS31480;product=hypothetical protein;protein_id=WP_223965170.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 12258 13049 . - . ID=gene-LDO45_RS31485;Name=LDO45_RS31485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31485;old_locus_tag=BDI4_800020 NZ_CAJZAS010000239.1 Protein Homology CDS 12258 13049 . - 0 ID=cds-WP_223965171.1;Parent=gene-LDO45_RS31485;Dbxref=GenBank:WP_223965171.1;Name=WP_223965171.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF044880.2;locus_tag=LDO45_RS31485;product=phage baseplate protein;protein_id=WP_223965171.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 13161 14156 . - . ID=gene-LDO45_RS31490;Name=LDO45_RS31490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31490;old_locus_tag=BDI4_800021 NZ_CAJZAS010000239.1 GeneMarkS-2+ CDS 13161 14156 . - 0 ID=cds-WP_223965172.1;Parent=gene-LDO45_RS31490;Dbxref=GenBank:WP_223965172.1;Name=WP_223965172.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31490;product=hypothetical protein;protein_id=WP_223965172.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq pseudogene 14264 14539 . - . ID=gene-LDO45_RS31495;Name=LDO45_RS31495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS31495;old_locus_tag=BDI4_800022;partial=true;pseudo=true;start_range=.,14264 NZ_CAJZAS010000239.1 Protein Homology CDS 14264 14539 . - 0 ID=cds-LDO45_RS31495;Parent=gene-LDO45_RS31495;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006475916.1;locus_tag=LDO45_RS31495;partial=true;product=DUF159 family protein;pseudo=true;start_range=.,14264;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 14621 15085 . + . ID=gene-LDO45_RS31500;Name=LDO45_RS31500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31500;old_locus_tag=BDI4_800023 NZ_CAJZAS010000239.1 Protein Homology CDS 14621 15085 . + 0 ID=cds-WP_223965180.1;Parent=gene-LDO45_RS31500;Dbxref=GenBank:WP_223965180.1;Name=WP_223965180.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890265.1;locus_tag=LDO45_RS31500;product=hypothetical protein;protein_id=WP_223965180.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 15291 16016 . - . ID=gene-LDO45_RS31505;Name=LDO45_RS31505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31505;old_locus_tag=BDI4_800024 NZ_CAJZAS010000239.1 GeneMarkS-2+ CDS 15291 16016 . - 0 ID=cds-WP_223965173.1;Parent=gene-LDO45_RS31505;Dbxref=GenBank:WP_223965173.1;Name=WP_223965173.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31505;product=hypothetical protein;protein_id=WP_223965173.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 16174 16374 . - . ID=gene-LDO45_RS31510;Name=LDO45_RS31510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31510 NZ_CAJZAS010000239.1 Protein Homology CDS 16174 16374 . - 0 ID=cds-WP_223965174.1;Parent=gene-LDO45_RS31510;Dbxref=GenBank:WP_223965174.1;Name=WP_223965174.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007583315.1;locus_tag=LDO45_RS31510;product=hypothetical protein;protein_id=WP_223965174.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 16371 16853 . - . ID=gene-LDO45_RS31515;Name=LDO45_RS31515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31515;old_locus_tag=BDI4_800026 NZ_CAJZAS010000239.1 Protein Homology CDS 16371 16853 . - 0 ID=cds-WP_223965175.1;Parent=gene-LDO45_RS31515;Dbxref=GenBank:WP_223965175.1;Name=WP_223965175.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013093838.1;locus_tag=LDO45_RS31515;product=hypothetical protein;protein_id=WP_223965175.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 16846 17889 . - . ID=gene-LDO45_RS31520;Name=LDO45_RS31520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31520;old_locus_tag=BDI4_800028 NZ_CAJZAS010000239.1 Protein Homology CDS 16846 17889 . - 0 ID=cds-WP_223965176.1;Parent=gene-LDO45_RS31520;Dbxref=GenBank:WP_223965176.1;Name=WP_223965176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013093837.1;locus_tag=LDO45_RS31520;product=hypothetical protein;protein_id=WP_223965176.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 18216 18509 . + . ID=gene-LDO45_RS31525;Name=LDO45_RS31525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31525;old_locus_tag=BDI4_800031 NZ_CAJZAS010000239.1 Protein Homology CDS 18216 18509 . + 0 ID=cds-WP_223965177.1;Parent=gene-LDO45_RS31525;Dbxref=GenBank:WP_223965177.1;Name=WP_223965177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008164564.1;locus_tag=LDO45_RS31525;product=ASCH domain-containing protein;protein_id=WP_223965177.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 18506 18784 . + . ID=gene-LDO45_RS31530;Name=LDO45_RS31530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31530;old_locus_tag=BDI4_800032 NZ_CAJZAS010000239.1 GeneMarkS-2+ CDS 18506 18784 . + 0 ID=cds-WP_223965178.1;Parent=gene-LDO45_RS31530;Dbxref=GenBank:WP_223965178.1;Name=WP_223965178.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31530;product=hypothetical protein;protein_id=WP_223965178.1;transl_table=11 NZ_CAJZAS010000239.1 RefSeq gene 18781 19030 . + . ID=gene-LDO45_RS31535;Name=LDO45_RS31535;end_range=19030,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31535;partial=true NZ_CAJZAS010000239.1 GeneMarkS-2+ CDS 18781 19030 . + 0 ID=cds-WP_223965179.1;Parent=gene-LDO45_RS31535;Dbxref=GenBank:WP_223965179.1;Name=WP_223965179.1;end_range=19030,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31535;partial=true;product=hypothetical protein;protein_id=WP_223965179.1;transl_table=11 ##sequence-region NZ_CAJZAS010000240.1 1 18926 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000240.1 RefSeq region 1 18926 . + . ID=NZ_CAJZAS010000240.1:1..18926;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_81 NZ_CAJZAS010000240.1 RefSeq pseudogene 1 153 . - . ID=gene-LDO45_RS31540;Name=LDO45_RS31540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS31540;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000240.1 Protein Homology CDS 1 153 . - 0 ID=cds-LDO45_RS31540;Parent=gene-LDO45_RS31540;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364755.1;locus_tag=LDO45_RS31540;partial=true;product=DNA polymerase Y family protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000240.1 RefSeq pseudogene 86 821 . - . ID=gene-LDO45_RS31545;Name=imuA;gbkey=Gene;gene=imuA;gene_biotype=pseudogene;locus_tag=LDO45_RS31545;old_locus_tag=BDI4_810002;pseudo=true NZ_CAJZAS010000240.1 Protein Homology CDS 86 821 . - 0 ID=cds-LDO45_RS31545;Parent=gene-LDO45_RS31545;Note=frameshifted%3B too many ambiguous residues;Ontology_term=GO:0009432,GO:0051782;gbkey=CDS;gene=imuA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195290.1;locus_tag=LDO45_RS31545;product=translesion DNA synthesis-associated protein ImuA;pseudo=true;transl_table=11 NZ_CAJZAS010000240.1 RefSeq gene 1079 1873 . - . ID=gene-LDO45_RS31550;Name=LDO45_RS31550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31550;old_locus_tag=BDI4_810003 NZ_CAJZAS010000240.1 Protein Homology CDS 1079 1873 . - 0 ID=cds-WP_059526179.1;Parent=gene-LDO45_RS31550;Dbxref=GenBank:WP_059526179.1;Name=WP_059526179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895978.1;locus_tag=LDO45_RS31550;product=ABC transporter ATP-binding protein;protein_id=WP_059526179.1;transl_table=11 NZ_CAJZAS010000240.1 RefSeq gene 1875 2771 . - . ID=gene-LDO45_RS31555;Name=LDO45_RS31555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31555;old_locus_tag=BDI4_810004 NZ_CAJZAS010000240.1 Protein Homology CDS 1875 2771 . - 0 ID=cds-WP_059526182.1;Parent=gene-LDO45_RS31555;Dbxref=GenBank:WP_059526182.1;Name=WP_059526182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893130.1;locus_tag=LDO45_RS31555;product=ABC transporter permease;protein_id=WP_059526182.1;transl_table=11 NZ_CAJZAS010000240.1 RefSeq gene 2911 3876 . - . ID=gene-LDO45_RS31560;Name=LDO45_RS31560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31560;old_locus_tag=BDI4_810005 NZ_CAJZAS010000240.1 Protein Homology CDS 2911 3876 . - 0 ID=cds-WP_059691442.1;Parent=gene-LDO45_RS31560;Dbxref=GenBank:WP_059691442.1;Name=WP_059691442.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004202953.1;locus_tag=LDO45_RS31560;product=ABC transporter substrate-binding protein;protein_id=WP_059691442.1;transl_table=11 NZ_CAJZAS010000240.1 RefSeq gene 4224 4532 . + . ID=gene-LDO45_RS31565;Name=LDO45_RS31565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31565;old_locus_tag=BDI4_810006 NZ_CAJZAS010000240.1 Protein Homology CDS 4224 4532 . + 0 ID=cds-WP_059526188.1;Parent=gene-LDO45_RS31565;Dbxref=GenBank:WP_059526188.1;Name=WP_059526188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760740.1;locus_tag=LDO45_RS31565;product=VF_A0006 family four-cysteine protein;protein_id=WP_059526188.1;transl_table=11 NZ_CAJZAS010000240.1 RefSeq gene 4643 5458 . - . ID=gene-LDO45_RS31570;Name=LDO45_RS31570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31570;old_locus_tag=BDI4_810007 NZ_CAJZAS010000240.1 Protein Homology CDS 4643 5458 . - 0 ID=cds-WP_059691441.1;Parent=gene-LDO45_RS31570;Dbxref=GenBank:WP_059691441.1;Name=WP_059691441.1;Ontology_term=GO:0042626,GO:0140359,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334303.1;locus_tag=LDO45_RS31570;product=MetQ/NlpA family ABC transporter substrate-binding protein;protein_id=WP_059691441.1;transl_table=11 NZ_CAJZAS010000240.1 RefSeq gene 5633 7201 . - . ID=gene-LDO45_RS31575;Name=LDO45_RS31575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31575;old_locus_tag=BDI4_810008 NZ_CAJZAS010000240.1 Protein Homology CDS 5633 7201 . - 0 ID=cds-WP_223965181.1;Parent=gene-LDO45_RS31575;Dbxref=GenBank:WP_223965181.1;Name=WP_223965181.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895972.1;locus_tag=LDO45_RS31575;product=methyl-accepting chemotaxis protein;protein_id=WP_223965181.1;transl_table=11 NZ_CAJZAS010000240.1 RefSeq gene 7401 7691 . + . ID=gene-LDO45_RS31580;Name=LDO45_RS31580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31580;old_locus_tag=BDI4_810009 NZ_CAJZAS010000240.1 Protein Homology CDS 7401 7691 . + 0 ID=cds-WP_044848209.1;Parent=gene-LDO45_RS31580;Dbxref=GenBank:WP_044848209.1;Name=WP_044848209.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329263.1;locus_tag=LDO45_RS31580;product=YciI family protein;protein_id=WP_044848209.1;transl_table=11 NZ_CAJZAS010000240.1 RefSeq gene 7843 8460 . - . ID=gene-LDO45_RS31585;Name=LDO45_RS31585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31585;old_locus_tag=BDI4_810010 NZ_CAJZAS010000240.1 Protein Homology CDS 7843 8460 . - 0 ID=cds-WP_059599875.1;Parent=gene-LDO45_RS31585;Dbxref=GenBank:WP_059599875.1;Name=WP_059599875.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009972812.1;locus_tag=LDO45_RS31585;product=SCO family protein;protein_id=WP_059599875.1;transl_table=11 NZ_CAJZAS010000240.1 RefSeq gene 8479 9381 . - . ID=gene-LDO45_RS31590;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=LDO45_RS31590;old_locus_tag=BDI4_810011 NZ_CAJZAS010000240.1 Protein Homology CDS 8479 9381 . - 0 ID=cds-WP_006477738.1;Parent=gene-LDO45_RS31590;Dbxref=GenBank:WP_006477738.1;Name=WP_006477738.1;Ontology_term=GO:0006783,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme biosynthetic process|0006783||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543880.1;locus_tag=LDO45_RS31590;product=heme o synthase;protein_id=WP_006477738.1;transl_table=11 NZ_CAJZAS010000240.1 RefSeq gene 9390 10502 . - . ID=gene-LDO45_RS31595;Name=LDO45_RS31595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31595;old_locus_tag=BDI4_810012 NZ_CAJZAS010000240.1 Protein Homology CDS 9390 10502 . - 0 ID=cds-WP_059703318.1;Parent=gene-LDO45_RS31595;Dbxref=GenBank:WP_059703318.1;Name=WP_059703318.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895968.1;locus_tag=LDO45_RS31595;product=heme A synthase;protein_id=WP_059703318.1;transl_table=11 NZ_CAJZAS010000240.1 RefSeq gene 10528 11154 . - . ID=gene-LDO45_RS31600;Name=LDO45_RS31600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31600;old_locus_tag=BDI4_810014 NZ_CAJZAS010000240.1 Protein Homology CDS 10528 11154 . - 0 ID=cds-WP_223965182.1;Parent=gene-LDO45_RS31600;Dbxref=GenBank:WP_223965182.1;Name=WP_223965182.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658000.1;locus_tag=LDO45_RS31600;product=cytochrome C oxidase subunit I;protein_id=WP_223965182.1;transl_table=11 NZ_CAJZAS010000240.1 RefSeq gene 11215 11925 . - . ID=gene-LDO45_RS31605;Name=LDO45_RS31605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31605;old_locus_tag=BDI4_810015 NZ_CAJZAS010000240.1 Protein Homology CDS 11215 11925 . - 0 ID=cds-WP_059526295.1;Parent=gene-LDO45_RS31605;Dbxref=GenBank:WP_059526295.1;Name=WP_059526295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006763331.1;locus_tag=LDO45_RS31605;product=SURF1 family protein;protein_id=WP_059526295.1;transl_table=11 NZ_CAJZAS010000240.1 RefSeq gene 12010 12219 . + . ID=gene-LDO45_RS31610;Name=LDO45_RS31610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31610;old_locus_tag=BDI4_810013 NZ_CAJZAS010000240.1 Protein Homology CDS 12010 12219 . + 0 ID=cds-WP_044848213.1;Parent=gene-LDO45_RS31610;Dbxref=GenBank:WP_044848213.1;Name=WP_044848213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334311.1;locus_tag=LDO45_RS31610;product=twin transmembrane helix small protein;protein_id=WP_044848213.1;transl_table=11 NZ_CAJZAS010000240.1 RefSeq gene 12410 13267 . - . ID=gene-LDO45_RS31615;Name=LDO45_RS31615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31615;old_locus_tag=BDI4_810017 NZ_CAJZAS010000240.1 Protein Homology CDS 12410 13267 . - 0 ID=cds-WP_059464449.1;Parent=gene-LDO45_RS31615;Dbxref=GenBank:WP_059464449.1;Name=WP_059464449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013587015.1;locus_tag=LDO45_RS31615;product=cytochrome c oxidase subunit 3;protein_id=WP_059464449.1;transl_table=11 NZ_CAJZAS010000240.1 RefSeq gene 13414 13614 . - . ID=gene-LDO45_RS31620;Name=LDO45_RS31620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31620;old_locus_tag=BDI4_810018 NZ_CAJZAS010000240.1 Protein Homology CDS 13414 13614 . - 0 ID=cds-WP_006760730.1;Parent=gene-LDO45_RS31620;Dbxref=GenBank:WP_006760730.1;Name=WP_006760730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398201.1;locus_tag=LDO45_RS31620;product=DUF2970 domain-containing protein;protein_id=WP_006760730.1;transl_table=11 NZ_CAJZAS010000240.1 RefSeq gene 13631 14239 . - . ID=gene-LDO45_RS31625;Name=LDO45_RS31625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31625;old_locus_tag=BDI4_810019 NZ_CAJZAS010000240.1 Protein Homology CDS 13631 14239 . - 0 ID=cds-WP_059507798.1;Parent=gene-LDO45_RS31625;Dbxref=GenBank:WP_059507798.1;Name=WP_059507798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006024429.1;locus_tag=LDO45_RS31625;product=cytochrome c oxidase assembly protein;protein_id=WP_059507798.1;transl_table=11 NZ_CAJZAS010000240.1 RefSeq gene 14275 14415 . - . ID=gene-LDO45_RS31630;Name=LDO45_RS31630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31630;old_locus_tag=BDI4_810020 NZ_CAJZAS010000240.1 Protein Homology CDS 14275 14415 . - 0 ID=cds-WP_006760728.1;Parent=gene-LDO45_RS31630;Dbxref=GenBank:WP_006760728.1;Name=WP_006760728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486385.1;locus_tag=LDO45_RS31630;product=cytochrome oxidase small assembly protein;protein_id=WP_006760728.1;transl_table=11 NZ_CAJZAS010000240.1 RefSeq gene 14485 16092 . - . ID=gene-LDO45_RS31635;Name=ctaD;gbkey=Gene;gene=ctaD;gene_biotype=protein_coding;locus_tag=LDO45_RS31635;old_locus_tag=BDI4_810021 NZ_CAJZAS010000240.1 Protein Homology CDS 14485 16092 . - 0 ID=cds-WP_059526209.1;Parent=gene-LDO45_RS31635;Dbxref=GenBank:WP_059526209.1;Name=WP_059526209.1;Ontology_term=GO:0015990,GO:0004129;gbkey=CDS;gene=ctaD;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090602.1;locus_tag=LDO45_RS31635;product=cytochrome c oxidase subunit I;protein_id=WP_059526209.1;transl_table=11 NZ_CAJZAS010000240.1 RefSeq gene 16136 17719 . - . ID=gene-LDO45_RS31640;Name=coxB;gbkey=Gene;gene=coxB;gene_biotype=protein_coding;locus_tag=LDO45_RS31640;old_locus_tag=BDI4_810022 NZ_CAJZAS010000240.1 Protein Homology CDS 16136 17719 . - 0 ID=cds-WP_223965183.1;Parent=gene-LDO45_RS31640;Dbxref=GenBank:WP_223965183.1;Name=WP_223965183.1;Ontology_term=GO:0004129,GO:0016020;gbkey=CDS;gene=coxB;go_component=membrane|0016020||IEA;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398197.1;locus_tag=LDO45_RS31640;product=cytochrome c oxidase subunit II;protein_id=WP_223965183.1;transl_table=11 NZ_CAJZAS010000240.1 RefSeq gene 17776 18300 . - . ID=gene-LDO45_RS31645;Name=LDO45_RS31645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31645;old_locus_tag=BDI4_810023 NZ_CAJZAS010000240.1 Protein Homology CDS 17776 18300 . - 0 ID=cds-WP_059599867.1;Parent=gene-LDO45_RS31645;Dbxref=GenBank:WP_059599867.1;Name=WP_059599867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486400.1;locus_tag=LDO45_RS31645;product=DUF2244 domain-containing protein;protein_id=WP_059599867.1;transl_table=11 NZ_CAJZAS010000240.1 RefSeq pseudogene 18496 18926 . - . ID=gene-LDO45_RS31650;Name=LDO45_RS31650;end_range=18926,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS31650;old_locus_tag=BDI4_810024;partial=true;pseudo=true NZ_CAJZAS010000240.1 Protein Homology CDS 18496 18926 . - 2 ID=cds-LDO45_RS31650;Parent=gene-LDO45_RS31650;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=18926,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762484.1;locus_tag=LDO45_RS31650;partial=true;product=SAM-dependent methyltransferase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000241.1 1 14520 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000241.1 RefSeq region 1 14520 . + . ID=NZ_CAJZAS010000241.1:1..14520;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_82 NZ_CAJZAS010000241.1 RefSeq pseudogene 80 475 . + . ID=gene-LDO45_RS31655;Name=LDO45_RS31655;end_range=475,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS31655;old_locus_tag=BDI4_820001;partial=true;pseudo=true NZ_CAJZAS010000241.1 Protein Homology CDS 80 475 . + 0 ID=cds-LDO45_RS31655;Parent=gene-LDO45_RS31655;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=475,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017476.5;locus_tag=LDO45_RS31655;partial=true;product=adhesin;pseudo=true;transl_table=11 NZ_CAJZAS010000241.1 RefSeq gene 726 2765 . + . ID=gene-LDO45_RS31660;Name=LDO45_RS31660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31660;old_locus_tag=BDI4_820002 NZ_CAJZAS010000241.1 Protein Homology CDS 726 2765 . + 0 ID=cds-WP_223965184.1;Parent=gene-LDO45_RS31660;Dbxref=GenBank:WP_223965184.1;Name=WP_223965184.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015831.5;locus_tag=LDO45_RS31660;product=YadA family autotransporter adhesin;protein_id=WP_223965184.1;transl_table=11 NZ_CAJZAS010000241.1 RefSeq gene 2861 3583 . + . ID=gene-LDO45_RS31665;Name=LDO45_RS31665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31665;old_locus_tag=BDI4_820003 NZ_CAJZAS010000241.1 Protein Homology CDS 2861 3583 . + 0 ID=cds-WP_223965185.1;Parent=gene-LDO45_RS31665;Dbxref=GenBank:WP_223965185.1;Name=WP_223965185.1;Ontology_term=GO:0015288,GO:0042834;gbkey=CDS;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494657.1;locus_tag=LDO45_RS31665;product=OmpA family protein;protein_id=WP_223965185.1;transl_table=11 NZ_CAJZAS010000241.1 RefSeq gene 3903 4622 . + . ID=gene-LDO45_RS31670;Name=LDO45_RS31670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31670;old_locus_tag=BDI4_820004 NZ_CAJZAS010000241.1 Protein Homology CDS 3903 4622 . + 0 ID=cds-WP_223965186.1;Parent=gene-LDO45_RS31670;Dbxref=GenBank:WP_223965186.1;Name=WP_223965186.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338876.1;locus_tag=LDO45_RS31670;product=response regulator transcription factor;protein_id=WP_223965186.1;transl_table=11 NZ_CAJZAS010000241.1 RefSeq gene 4684 5370 . - . ID=gene-LDO45_RS31675;Name=LDO45_RS31675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31675;old_locus_tag=BDI4_820005 NZ_CAJZAS010000241.1 Protein Homology CDS 4684 5370 . - 0 ID=cds-WP_223965190.1;Parent=gene-LDO45_RS31675;Dbxref=GenBank:WP_223965190.1;Name=WP_223965190.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338875.1;locus_tag=LDO45_RS31675;product=response regulator;protein_id=WP_223965190.1;transl_table=11 NZ_CAJZAS010000241.1 RefSeq gene 5608 8979 . - . ID=gene-LDO45_RS31680;Name=LDO45_RS31680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31680;old_locus_tag=BDI4_820006 NZ_CAJZAS010000241.1 Protein Homology CDS 5608 8979 . - 0 ID=cds-WP_223965187.1;Parent=gene-LDO45_RS31680;Dbxref=GenBank:WP_223965187.1;Name=WP_223965187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006489549.1;locus_tag=LDO45_RS31680;product=ESPR-type extended signal peptide-containing protein;protein_id=WP_223965187.1;transl_table=11 NZ_CAJZAS010000241.1 RefSeq gene 9503 12481 . - . ID=gene-LDO45_RS31685;Name=LDO45_RS31685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31685;old_locus_tag=BDI4_820007 NZ_CAJZAS010000241.1 Protein Homology CDS 9503 12481 . - 0 ID=cds-WP_223965188.1;Parent=gene-LDO45_RS31685;Dbxref=GenBank:WP_223965188.1;Name=WP_223965188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338873.1;locus_tag=LDO45_RS31685;product=ATP-binding protein;protein_id=WP_223965188.1;transl_table=11 NZ_CAJZAS010000241.1 RefSeq gene 12578 13396 . - . ID=gene-LDO45_RS31690;Name=LDO45_RS31690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31690;old_locus_tag=BDI4_820008 NZ_CAJZAS010000241.1 Protein Homology CDS 12578 13396 . - 0 ID=cds-WP_223965189.1;Parent=gene-LDO45_RS31690;Dbxref=GenBank:WP_223965189.1;Name=WP_223965189.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494649.1;locus_tag=LDO45_RS31690;product=response regulator transcription factor;protein_id=WP_223965189.1;transl_table=11 NZ_CAJZAS010000241.1 RefSeq pseudogene 13420 14520 . + . ID=gene-LDO45_RS31695;Name=LDO45_RS31695;end_range=14520,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS31695;partial=true;pseudo=true NZ_CAJZAS010000241.1 GeneMarkS-2+ CDS 13420 14520 . + 0 ID=cds-LDO45_RS31695;Parent=gene-LDO45_RS31695;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=14520,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31695;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000242.1 1 63489 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000242.1 RefSeq region 1 63489 . + . ID=NZ_CAJZAS010000242.1:1..63489;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_83 NZ_CAJZAS010000242.1 RefSeq gene 267 557 . + . ID=gene-LDO45_RS31700;Name=LDO45_RS31700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31700;old_locus_tag=BDI4_830002 NZ_CAJZAS010000242.1 GeneMarkS-2+ CDS 267 557 . + 0 ID=cds-WP_223965191.1;Parent=gene-LDO45_RS31700;Dbxref=GenBank:WP_223965191.1;Name=WP_223965191.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31700;product=hypothetical protein;protein_id=WP_223965191.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 811 1044 . + . ID=gene-LDO45_RS31705;Name=LDO45_RS31705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31705;old_locus_tag=BDI4_830004 NZ_CAJZAS010000242.1 GeneMarkS-2+ CDS 811 1044 . + 0 ID=cds-WP_223965192.1;Parent=gene-LDO45_RS31705;Dbxref=GenBank:WP_223965192.1;Name=WP_223965192.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31705;product=hypothetical protein;protein_id=WP_223965192.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 1469 1837 . + . ID=gene-LDO45_RS31710;Name=LDO45_RS31710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31710;old_locus_tag=BDI4_830006 NZ_CAJZAS010000242.1 GeneMarkS-2+ CDS 1469 1837 . + 0 ID=cds-WP_223965193.1;Parent=gene-LDO45_RS31710;Dbxref=GenBank:WP_223965193.1;Name=WP_223965193.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31710;product=hypothetical protein;protein_id=WP_223965193.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 1846 2112 . + . ID=gene-LDO45_RS31715;Name=LDO45_RS31715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31715;old_locus_tag=BDI4_830007 NZ_CAJZAS010000242.1 GeneMarkS-2+ CDS 1846 2112 . + 0 ID=cds-WP_223965194.1;Parent=gene-LDO45_RS31715;Dbxref=GenBank:WP_223965194.1;Name=WP_223965194.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31715;product=hypothetical protein;protein_id=WP_223965194.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 2138 2383 . + . ID=gene-LDO45_RS31720;Name=LDO45_RS31720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31720;old_locus_tag=BDI4_830008 NZ_CAJZAS010000242.1 GeneMarkS-2+ CDS 2138 2383 . + 0 ID=cds-WP_223965195.1;Parent=gene-LDO45_RS31720;Dbxref=GenBank:WP_223965195.1;Name=WP_223965195.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31720;product=hypothetical protein;protein_id=WP_223965195.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 2486 2731 . + . ID=gene-LDO45_RS31725;Name=LDO45_RS31725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31725 NZ_CAJZAS010000242.1 GeneMarkS-2+ CDS 2486 2731 . + 0 ID=cds-WP_223965196.1;Parent=gene-LDO45_RS31725;Dbxref=GenBank:WP_223965196.1;Name=WP_223965196.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31725;product=hypothetical protein;protein_id=WP_223965196.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 2889 3062 . + . ID=gene-LDO45_RS31730;Name=LDO45_RS31730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31730 NZ_CAJZAS010000242.1 GeneMarkS-2+ CDS 2889 3062 . + 0 ID=cds-WP_223965197.1;Parent=gene-LDO45_RS31730;Dbxref=GenBank:WP_223965197.1;Name=WP_223965197.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31730;product=hypothetical protein;protein_id=WP_223965197.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 3075 3350 . + . ID=gene-LDO45_RS31735;Name=LDO45_RS31735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31735;old_locus_tag=BDI4_830011 NZ_CAJZAS010000242.1 GeneMarkS-2+ CDS 3075 3350 . + 0 ID=cds-WP_223965198.1;Parent=gene-LDO45_RS31735;Dbxref=GenBank:WP_223965198.1;Name=WP_223965198.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31735;product=hypothetical protein;protein_id=WP_223965198.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 3988 4284 . - . ID=gene-LDO45_RS31740;Name=LDO45_RS31740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31740;old_locus_tag=BDI4_830015 NZ_CAJZAS010000242.1 Protein Homology CDS 3988 4284 . - 0 ID=cds-WP_223965199.1;Parent=gene-LDO45_RS31740;Dbxref=GenBank:WP_223965199.1;Name=WP_223965199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752201.1;locus_tag=LDO45_RS31740;product=H-NS histone family protein;protein_id=WP_223965199.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 4486 4731 . - . ID=gene-LDO45_RS31745;Name=LDO45_RS31745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31745 NZ_CAJZAS010000242.1 GeneMarkS-2+ CDS 4486 4731 . - 0 ID=cds-WP_223965200.1;Parent=gene-LDO45_RS31745;Dbxref=GenBank:WP_223965200.1;Name=WP_223965200.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31745;product=hypothetical protein;protein_id=WP_223965200.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 4781 5134 . - . ID=gene-LDO45_RS31750;Name=LDO45_RS31750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31750 NZ_CAJZAS010000242.1 Protein Homology CDS 4781 5134 . - 0 ID=cds-WP_223965201.1;Parent=gene-LDO45_RS31750;Dbxref=GenBank:WP_223965201.1;Name=WP_223965201.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013691864.1;locus_tag=LDO45_RS31750;product=hypothetical protein;protein_id=WP_223965201.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 5143 5520 . - . ID=gene-LDO45_RS31755;Name=LDO45_RS31755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31755;old_locus_tag=BDI4_830017 NZ_CAJZAS010000242.1 GeneMarkS-2+ CDS 5143 5520 . - 0 ID=cds-WP_223965202.1;Parent=gene-LDO45_RS31755;Dbxref=GenBank:WP_223965202.1;Name=WP_223965202.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31755;product=hypothetical protein;protein_id=WP_223965202.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 6067 6342 . - . ID=gene-LDO45_RS31760;Name=LDO45_RS31760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31760;old_locus_tag=BDI4_830019 NZ_CAJZAS010000242.1 Protein Homology CDS 6067 6342 . - 0 ID=cds-WP_223965203.1;Parent=gene-LDO45_RS31760;Dbxref=GenBank:WP_223965203.1;Name=WP_223965203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749863.1;locus_tag=LDO45_RS31760;product=XRE family transcriptional regulator;protein_id=WP_223965203.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 6861 7274 . - . ID=gene-LDO45_RS31765;Name=LDO45_RS31765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31765;old_locus_tag=BDI4_830020 NZ_CAJZAS010000242.1 Protein Homology CDS 6861 7274 . - 0 ID=cds-WP_253074758.1;Parent=gene-LDO45_RS31765;Dbxref=GenBank:WP_253074758.1;Name=WP_253074758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333759.1;locus_tag=LDO45_RS31765;product=antirestriction protein;protein_id=WP_253074758.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 7450 9426 . + . ID=gene-LDO45_RS31770;Name=LDO45_RS31770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31770;old_locus_tag=BDI4_830022 NZ_CAJZAS010000242.1 Protein Homology CDS 7450 9426 . + 0 ID=cds-WP_223965204.1;Parent=gene-LDO45_RS31770;Dbxref=GenBank:WP_223965204.1;Name=WP_223965204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749856.1;locus_tag=LDO45_RS31770;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_223965204.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 9465 9989 . - . ID=gene-LDO45_RS31775;Name=LDO45_RS31775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31775;old_locus_tag=BDI4_830023 NZ_CAJZAS010000242.1 GeneMarkS-2+ CDS 9465 9989 . - 0 ID=cds-WP_223965205.1;Parent=gene-LDO45_RS31775;Dbxref=GenBank:WP_223965205.1;Name=WP_223965205.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31775;product=hypothetical protein;protein_id=WP_223965205.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 10873 11637 . - . ID=gene-LDO45_RS31780;Name=LDO45_RS31780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31780;old_locus_tag=BDI4_830024 NZ_CAJZAS010000242.1 GeneMarkS-2+ CDS 10873 11637 . - 0 ID=cds-WP_223965206.1;Parent=gene-LDO45_RS31780;Dbxref=GenBank:WP_223965206.1;Name=WP_223965206.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31780;product=hypothetical protein;protein_id=WP_223965206.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 11790 14516 . - . ID=gene-LDO45_RS31785;Name=LDO45_RS31785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31785;old_locus_tag=BDI4_830025 NZ_CAJZAS010000242.1 Protein Homology CDS 11790 14516 . - 0 ID=cds-WP_223965207.1;Parent=gene-LDO45_RS31785;Dbxref=GenBank:WP_223965207.1;Name=WP_223965207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749851.1;locus_tag=LDO45_RS31785;product=LPD7 domain-containing protein;protein_id=WP_223965207.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 14506 14919 . - . ID=gene-LDO45_RS31790;Name=mobC;gbkey=Gene;gene=mobC;gene_biotype=protein_coding;locus_tag=LDO45_RS31790;old_locus_tag=BDI4_830026 NZ_CAJZAS010000242.1 Protein Homology CDS 14506 14919 . - 0 ID=cds-WP_223965208.1;Parent=gene-LDO45_RS31790;Dbxref=GenBank:WP_223965208.1;Name=WP_223965208.1;gbkey=CDS;gene=mobC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333749.1;locus_tag=LDO45_RS31790;product=plasmid mobilization relaxosome protein MobC;protein_id=WP_223965208.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 14946 15746 . - . ID=gene-LDO45_RS31795;Name=LDO45_RS31795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31795;old_locus_tag=BDI4_830027 NZ_CAJZAS010000242.1 Protein Homology CDS 14946 15746 . - 0 ID=cds-WP_223965209.1;Parent=gene-LDO45_RS31795;Dbxref=GenBank:WP_223965209.1;Name=WP_223965209.1;Ontology_term=GO:0005743,GO:0035632;gbkey=CDS;go_component=mitochondrial inner membrane|0005743||IEA,mitochondrial prohibitin complex|0035632||IEA;inference=COORDINATES: protein motif:HMM:NF013324.5;locus_tag=LDO45_RS31795;product=prohibitin family protein;protein_id=WP_223965209.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 15927 16160 . + . ID=gene-LDO45_RS31800;Name=LDO45_RS31800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31800;old_locus_tag=BDI4_830028 NZ_CAJZAS010000242.1 GeneMarkS-2+ CDS 15927 16160 . + 0 ID=cds-WP_223965210.1;Parent=gene-LDO45_RS31800;Dbxref=GenBank:WP_223965210.1;Name=WP_223965210.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31800;product=hypothetical protein;protein_id=WP_223965210.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 16540 18906 . - . ID=gene-LDO45_RS31805;Name=LDO45_RS31805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31805;old_locus_tag=BDI4_830029 NZ_CAJZAS010000242.1 Protein Homology CDS 16540 18906 . - 0 ID=cds-WP_223965211.1;Parent=gene-LDO45_RS31805;Dbxref=GenBank:WP_223965211.1;Name=WP_223965211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007183055.1;locus_tag=LDO45_RS31805;product=ATP-binding protein;protein_id=WP_223965211.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 18944 19762 . - . ID=gene-LDO45_RS31810;Name=LDO45_RS31810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31810;old_locus_tag=BDI4_830030 NZ_CAJZAS010000242.1 GeneMarkS-2+ CDS 18944 19762 . - 0 ID=cds-WP_223965212.1;Parent=gene-LDO45_RS31810;Dbxref=GenBank:WP_223965212.1;Name=WP_223965212.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31810;product=hypothetical protein;protein_id=WP_223965212.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 19808 20323 . - . ID=gene-LDO45_RS31815;Name=LDO45_RS31815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31815;old_locus_tag=BDI4_830032 NZ_CAJZAS010000242.1 Protein Homology CDS 19808 20323 . - 0 ID=cds-WP_223965213.1;Parent=gene-LDO45_RS31815;Dbxref=GenBank:WP_223965213.1;Name=WP_223965213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749847.1;locus_tag=LDO45_RS31815;product=hypothetical protein;protein_id=WP_223965213.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 20390 21145 . - . ID=gene-LDO45_RS31820;Name=stbB;gbkey=Gene;gene=stbB;gene_biotype=protein_coding;locus_tag=LDO45_RS31820;old_locus_tag=BDI4_830034 NZ_CAJZAS010000242.1 Protein Homology CDS 20390 21145 . - 0 ID=cds-WP_223965214.1;Parent=gene-LDO45_RS31820;Dbxref=GenBank:WP_223965214.1;Name=WP_223965214.1;gbkey=CDS;gene=stbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749846.1;locus_tag=LDO45_RS31820;product=StbB family protein;protein_id=WP_223965214.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 21142 21549 . - . ID=gene-LDO45_RS31825;Name=LDO45_RS31825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31825;old_locus_tag=BDI4_830035 NZ_CAJZAS010000242.1 GeneMarkS-2+ CDS 21142 21549 . - 0 ID=cds-WP_223965215.1;Parent=gene-LDO45_RS31825;Dbxref=GenBank:WP_223965215.1;Name=WP_223965215.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31825;product=hypothetical protein;protein_id=WP_223965215.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 21558 24143 . - . ID=gene-LDO45_RS31830;Name=LDO45_RS31830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31830;old_locus_tag=BDI4_830036 NZ_CAJZAS010000242.1 Protein Homology CDS 21558 24143 . - 0 ID=cds-WP_223965216.1;Parent=gene-LDO45_RS31830;Dbxref=GenBank:WP_223965216.1;Name=WP_223965216.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037421.5;locus_tag=LDO45_RS31830;product=LPD7 domain-containing protein;protein_id=WP_223965216.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 24133 26235 . - . ID=gene-LDO45_RS31835;Name=LDO45_RS31835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31835;old_locus_tag=BDI4_830037 NZ_CAJZAS010000242.1 Protein Homology CDS 24133 26235 . - 0 ID=cds-WP_223965217.1;Parent=gene-LDO45_RS31835;Dbxref=GenBank:WP_223965217.1;Name=WP_223965217.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749844.1;locus_tag=LDO45_RS31835;product=type IV secretory system conjugative DNA transfer family protein;protein_id=WP_223965217.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 26259 27380 . - . ID=gene-LDO45_RS31840;Name=LDO45_RS31840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31840;old_locus_tag=BDI4_830038 NZ_CAJZAS010000242.1 Protein Homology CDS 26259 27380 . - 0 ID=cds-WP_223965218.1;Parent=gene-LDO45_RS31840;Dbxref=GenBank:WP_223965218.1;Name=WP_223965218.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726321.1;locus_tag=LDO45_RS31840;product=ATPase%2C T2SS/T4P/T4SS family;protein_id=WP_223965218.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 27382 28641 . - . ID=gene-LDO45_RS31845;Name=virB10;gbkey=Gene;gene=virB10;gene_biotype=protein_coding;locus_tag=LDO45_RS31845;old_locus_tag=BDI4_830039 NZ_CAJZAS010000242.1 Protein Homology CDS 27382 28641 . - 0 ID=cds-WP_223965219.1;Parent=gene-LDO45_RS31845;Dbxref=GenBank:WP_223965219.1;Name=WP_223965219.1;gbkey=CDS;gene=virB10;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749840.1;locus_tag=LDO45_RS31845;product=type IV secretion system protein VirB10;protein_id=WP_223965219.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 28638 29480 . - . ID=gene-LDO45_RS31850;Name=LDO45_RS31850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31850;old_locus_tag=BDI4_830040 NZ_CAJZAS010000242.1 Protein Homology CDS 28638 29480 . - 0 ID=cds-WP_223965220.1;Parent=gene-LDO45_RS31850;Dbxref=GenBank:WP_223965220.1;Name=WP_223965220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749839.1;locus_tag=LDO45_RS31850;product=TrbG/VirB9 family P-type conjugative transfer protein;protein_id=WP_223965220.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 29477 30331 . - . ID=gene-LDO45_RS31855;Name=LDO45_RS31855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31855;old_locus_tag=BDI4_830041 NZ_CAJZAS010000242.1 Protein Homology CDS 29477 30331 . - 0 ID=cds-WP_223965259.1;Parent=gene-LDO45_RS31855;Dbxref=GenBank:WP_223965259.1;Name=WP_223965259.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016238.5;locus_tag=LDO45_RS31855;product=virB8 family protein;protein_id=WP_223965259.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 30334 30456 . - . ID=gene-LDO45_RS34345;Name=LDO45_RS34345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34345 NZ_CAJZAS010000242.1 GeneMarkS-2+ CDS 30334 30456 . - 0 ID=cds-WP_290371048.1;Parent=gene-LDO45_RS34345;Dbxref=GenBank:WP_290371048.1;Name=WP_290371048.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34345;product=hypothetical protein;protein_id=WP_290371048.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 30511 30894 . - . ID=gene-LDO45_RS31860;Name=LDO45_RS31860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31860;old_locus_tag=BDI4_830042 NZ_CAJZAS010000242.1 GeneMarkS-2+ CDS 30511 30894 . - 0 ID=cds-WP_223965221.1;Parent=gene-LDO45_RS31860;Dbxref=GenBank:WP_223965221.1;Name=WP_223965221.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31860;product=hypothetical protein;protein_id=WP_223965221.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 30929 31852 . - . ID=gene-LDO45_RS31865;Name=LDO45_RS31865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31865;old_locus_tag=BDI4_830043 NZ_CAJZAS010000242.1 Protein Homology CDS 30929 31852 . - 0 ID=cds-WP_223965222.1;Parent=gene-LDO45_RS31865;Dbxref=GenBank:WP_223965222.1;Name=WP_223965222.1;Ontology_term=GO:0030255;gbkey=CDS;go_process=protein secretion by the type IV secretion system|0030255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333734.1;locus_tag=LDO45_RS31865;product=type IV secretion system protein;protein_id=WP_223965222.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 31864 32502 . - . ID=gene-LDO45_RS31870;Name=LDO45_RS31870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31870;old_locus_tag=BDI4_830044 NZ_CAJZAS010000242.1 Protein Homology CDS 31864 32502 . - 0 ID=cds-WP_223965223.1;Parent=gene-LDO45_RS31870;Dbxref=GenBank:WP_223965223.1;Name=WP_223965223.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014726316.1;locus_tag=LDO45_RS31870;product=type IV secretion system protein;protein_id=WP_223965223.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 32566 34968 . - . ID=gene-LDO45_RS31875;Name=LDO45_RS31875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31875;old_locus_tag=BDI4_830045 NZ_CAJZAS010000242.1 Protein Homology CDS 32566 34968 . - 0 ID=cds-WP_223965224.1;Parent=gene-LDO45_RS31875;Dbxref=GenBank:WP_223965224.1;Name=WP_223965224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333730.1;locus_tag=LDO45_RS31875;product=transporter;protein_id=WP_223965224.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 34972 35178 . - . ID=gene-LDO45_RS31880;Name=LDO45_RS31880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31880;old_locus_tag=BDI4_830046 NZ_CAJZAS010000242.1 GeneMarkS-2+ CDS 34972 35178 . - 0 ID=cds-WP_223965225.1;Parent=gene-LDO45_RS31880;Dbxref=GenBank:WP_223965225.1;Name=WP_223965225.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31880;product=hypothetical protein;protein_id=WP_223965225.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 35162 35596 . - . ID=gene-LDO45_RS31885;Name=LDO45_RS31885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31885;old_locus_tag=BDI4_830047 NZ_CAJZAS010000242.1 Protein Homology CDS 35162 35596 . - 0 ID=cds-WP_223965226.1;Parent=gene-LDO45_RS31885;Dbxref=GenBank:WP_223965226.1;Name=WP_223965226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333729.1;locus_tag=LDO45_RS31885;product=VirB3 family type IV secretion system protein;protein_id=WP_223965226.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 35602 35955 . - . ID=gene-LDO45_RS31890;Name=LDO45_RS31890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31890;old_locus_tag=BDI4_830048 NZ_CAJZAS010000242.1 Protein Homology CDS 35602 35955 . - 0 ID=cds-WP_223965227.1;Parent=gene-LDO45_RS31890;Dbxref=GenBank:WP_223965227.1;Name=WP_223965227.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333728.1;locus_tag=LDO45_RS31890;product=hypothetical protein;protein_id=WP_223965227.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 35936 36574 . - . ID=gene-LDO45_RS31895;Name=LDO45_RS31895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31895;old_locus_tag=BDI4_830049 NZ_CAJZAS010000242.1 Protein Homology CDS 35936 36574 . - 0 ID=cds-WP_223965228.1;Parent=gene-LDO45_RS31895;Dbxref=GenBank:WP_223965228.1;Name=WP_223965228.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749827.1;locus_tag=LDO45_RS31895;product=lytic transglycosylase domain-containing protein;protein_id=WP_223965228.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 36602 38701 . - . ID=gene-LDO45_RS31900;Name=LDO45_RS31900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31900;old_locus_tag=BDI4_830050 NZ_CAJZAS010000242.1 Protein Homology CDS 36602 38701 . - 0 ID=cds-WP_223965229.1;Parent=gene-LDO45_RS31900;Dbxref=GenBank:WP_223965229.1;Name=WP_223965229.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749824.1;locus_tag=LDO45_RS31900;product=DNA topoisomerase;protein_id=WP_223965229.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 38813 39130 . - . ID=gene-LDO45_RS31905;Name=LDO45_RS31905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31905;old_locus_tag=BDI4_830051 NZ_CAJZAS010000242.1 GeneMarkS-2+ CDS 38813 39130 . - 0 ID=cds-WP_223965230.1;Parent=gene-LDO45_RS31905;Dbxref=GenBank:WP_223965230.1;Name=WP_223965230.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31905;product=hypothetical protein;protein_id=WP_223965230.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 39145 39762 . - . ID=gene-LDO45_RS31910;Name=LDO45_RS31910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31910;old_locus_tag=BDI4_830052 NZ_CAJZAS010000242.1 Protein Homology CDS 39145 39762 . - 0 ID=cds-WP_223965231.1;Parent=gene-LDO45_RS31910;Dbxref=GenBank:WP_223965231.1;Name=WP_223965231.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019069.5;locus_tag=LDO45_RS31910;product=TrbM/KikA/MpfK family conjugal transfer protein;protein_id=WP_223965231.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 39802 40296 . - . ID=gene-LDO45_RS31915;Name=LDO45_RS31915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31915;old_locus_tag=BDI4_830053 NZ_CAJZAS010000242.1 Protein Homology CDS 39802 40296 . - 0 ID=cds-WP_374109560.1;Parent=gene-LDO45_RS31915;Dbxref=GenBank:WP_374109560.1;Name=WP_374109560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013723328.1;locus_tag=LDO45_RS31915;product=phospholipase D family protein;protein_id=WP_374109560.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 40464 41468 . - . ID=gene-LDO45_RS31920;Name=LDO45_RS31920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31920;old_locus_tag=BDI4_830054 NZ_CAJZAS010000242.1 Protein Homology CDS 40464 41468 . - 0 ID=cds-WP_223965233.1;Parent=gene-LDO45_RS31920;Dbxref=GenBank:WP_223965233.1;Name=WP_223965233.1;Ontology_term=GO:0015288,GO:0042834;gbkey=CDS;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: protein motif:HMM:NF012894.5;locus_tag=LDO45_RS31920;product=OmpA family protein;protein_id=WP_223965233.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 41525 43825 . - . ID=gene-LDO45_RS31925;Name=LDO45_RS31925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31925;old_locus_tag=BDI4_830055 NZ_CAJZAS010000242.1 Protein Homology CDS 41525 43825 . - 0 ID=cds-WP_223965234.1;Parent=gene-LDO45_RS31925;Dbxref=GenBank:WP_223965234.1;Name=WP_223965234.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004534591.1;locus_tag=LDO45_RS31925;product=YadA family autotransporter adhesin;protein_id=WP_223965234.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 44295 44576 . + . ID=gene-LDO45_RS31930;Name=LDO45_RS31930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31930;old_locus_tag=BDI4_830056 NZ_CAJZAS010000242.1 Protein Homology CDS 44295 44576 . + 0 ID=cds-WP_223965235.1;Parent=gene-LDO45_RS31930;Dbxref=GenBank:WP_223965235.1;Name=WP_223965235.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014194526.1;locus_tag=LDO45_RS31930;product=Arc family DNA-binding protein;protein_id=WP_223965235.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 44635 45546 . - . ID=gene-LDO45_RS31935;Name=LDO45_RS31935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31935;old_locus_tag=BDI4_830057 NZ_CAJZAS010000242.1 Protein Homology CDS 44635 45546 . - 0 ID=cds-WP_223965236.1;Parent=gene-LDO45_RS31935;Dbxref=GenBank:WP_223965236.1;Name=WP_223965236.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: protein motif:HMM:NF012699.5;locus_tag=LDO45_RS31935;product=fatty acid desaturase;protein_id=WP_223965236.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 45596 46309 . - . ID=gene-LDO45_RS31940;Name=LDO45_RS31940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31940 NZ_CAJZAS010000242.1 Protein Homology CDS 45596 46309 . - 0 ID=cds-WP_223965237.1;Parent=gene-LDO45_RS31940;Dbxref=GenBank:WP_223965237.1;Name=WP_223965237.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015437.5;locus_tag=LDO45_RS31940;product=LuxR family transcriptional regulator;protein_id=WP_223965237.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 46977 48005 . - . ID=gene-LDO45_RS31945;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=LDO45_RS31945;old_locus_tag=BDI4_830063 NZ_CAJZAS010000242.1 Protein Homology CDS 46977 48005 . - 0 ID=cds-WP_223965238.1;Parent=gene-LDO45_RS31945;Dbxref=GenBank:WP_223965238.1;Name=WP_223965238.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007182879.1;locus_tag=LDO45_RS31945;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_223965238.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 48018 48770 . - . ID=gene-LDO45_RS31950;Name=LDO45_RS31950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31950;old_locus_tag=BDI4_830064 NZ_CAJZAS010000242.1 Protein Homology CDS 48018 48770 . - 0 ID=cds-WP_223965239.1;Parent=gene-LDO45_RS31950;Dbxref=GenBank:WP_223965239.1;Name=WP_223965239.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018435106.1;locus_tag=LDO45_RS31950;product=OmpW family protein;protein_id=WP_223965239.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 49192 49839 . - . ID=gene-LDO45_RS31955;Name=LDO45_RS31955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31955;old_locus_tag=BDI4_830065 NZ_CAJZAS010000242.1 Protein Homology CDS 49192 49839 . - 0 ID=cds-WP_223965240.1;Parent=gene-LDO45_RS31955;Dbxref=GenBank:WP_223965240.1;Name=WP_223965240.1;Ontology_term=GO:0009432,GO:0018142,GO:0003697,GO:0008233;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA,peptidase activity|0008233||IEA;go_process=SOS response|0009432||IEA,obsolete protein-DNA covalent cross-linking|0018142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006475916.1;locus_tag=LDO45_RS31955;product=SOS response-associated peptidase;protein_id=WP_223965240.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 50198 50461 . - . ID=gene-LDO45_RS31960;Name=LDO45_RS31960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31960 NZ_CAJZAS010000242.1 GeneMarkS-2+ CDS 50198 50461 . - 0 ID=cds-WP_223965241.1;Parent=gene-LDO45_RS31960;Dbxref=GenBank:WP_223965241.1;Name=WP_223965241.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31960;product=hypothetical protein;protein_id=WP_223965241.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 50465 51634 . - . ID=gene-LDO45_RS31965;Name=LDO45_RS31965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31965;old_locus_tag=BDI4_830068 NZ_CAJZAS010000242.1 GeneMarkS-2+ CDS 50465 51634 . - 0 ID=cds-WP_223965242.1;Parent=gene-LDO45_RS31965;Dbxref=GenBank:WP_223965242.1;Name=WP_223965242.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31965;product=hypothetical protein;protein_id=WP_223965242.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq pseudogene 51594 51845 . + . ID=gene-LDO45_RS31970;Name=LDO45_RS31970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS31970;old_locus_tag=BDI4_830069;partial=true;pseudo=true;start_range=.,51594 NZ_CAJZAS010000242.1 Protein Homology CDS 51594 51845 . + 0 ID=cds-LDO45_RS31970;Parent=gene-LDO45_RS31970;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012211067.1;locus_tag=LDO45_RS31970;partial=true;product=hypothetical protein;pseudo=true;start_range=.,51594;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 51872 52654 . - . ID=gene-LDO45_RS31975;Name=trfA;gbkey=Gene;gene=trfA;gene_biotype=protein_coding;locus_tag=LDO45_RS31975;old_locus_tag=BDI4_830071 NZ_CAJZAS010000242.1 Protein Homology CDS 51872 52654 . - 0 ID=cds-WP_223965243.1;Parent=gene-LDO45_RS31975;Dbxref=GenBank:WP_223965243.1;Name=WP_223965243.1;gbkey=CDS;gene=trfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006482109.1;locus_tag=LDO45_RS31975;product=plasmid replication initiator TrfA;protein_id=WP_223965243.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 53567 53869 . - . ID=gene-LDO45_RS31980;Name=LDO45_RS31980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31980;old_locus_tag=BDI4_830074 NZ_CAJZAS010000242.1 GeneMarkS-2+ CDS 53567 53869 . - 0 ID=cds-WP_223965244.1;Parent=gene-LDO45_RS31980;Dbxref=GenBank:WP_223965244.1;Name=WP_223965244.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS31980;product=hypothetical protein;protein_id=WP_223965244.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 53899 54543 . - . ID=gene-LDO45_RS31985;Name=LDO45_RS31985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31985;old_locus_tag=BDI4_830075 NZ_CAJZAS010000242.1 Protein Homology CDS 53899 54543 . - 0 ID=cds-WP_223965245.1;Parent=gene-LDO45_RS31985;Dbxref=GenBank:WP_223965245.1;Name=WP_223965245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017333791.1;locus_tag=LDO45_RS31985;product=division plane positioning ATPase MipZ;protein_id=WP_223965245.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 55054 55323 . + . ID=gene-LDO45_RS31990;Name=LDO45_RS31990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31990;old_locus_tag=BDI4_830076 NZ_CAJZAS010000242.1 Protein Homology CDS 55054 55323 . + 0 ID=cds-WP_081538743.1;Parent=gene-LDO45_RS31990;Dbxref=GenBank:WP_081538743.1;Name=WP_081538743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017424109.1;locus_tag=LDO45_RS31990;product=DUF1778 domain-containing protein;protein_id=WP_081538743.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 55320 55808 . + . ID=gene-LDO45_RS31995;Name=LDO45_RS31995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS31995;old_locus_tag=BDI4_830077 NZ_CAJZAS010000242.1 Protein Homology CDS 55320 55808 . + 0 ID=cds-WP_223965246.1;Parent=gene-LDO45_RS31995;Dbxref=GenBank:WP_223965246.1;Name=WP_223965246.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012732893.1;locus_tag=LDO45_RS31995;product=GNAT family N-acetyltransferase;protein_id=WP_223965246.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 56076 56378 . + . ID=gene-LDO45_RS32000;Name=LDO45_RS32000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32000;old_locus_tag=BDI4_830078 NZ_CAJZAS010000242.1 Protein Homology CDS 56076 56378 . + 0 ID=cds-WP_223965247.1;Parent=gene-LDO45_RS32000;Dbxref=GenBank:WP_223965247.1;Name=WP_223965247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015877381.1;locus_tag=LDO45_RS32000;product=DUF1778 domain-containing protein;protein_id=WP_223965247.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 56375 56893 . + . ID=gene-LDO45_RS32005;Name=LDO45_RS32005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32005;old_locus_tag=BDI4_830079 NZ_CAJZAS010000242.1 Protein Homology CDS 56375 56893 . + 0 ID=cds-WP_223965248.1;Parent=gene-LDO45_RS32005;Dbxref=GenBank:WP_223965248.1;Name=WP_223965248.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009521112.1;locus_tag=LDO45_RS32005;product=GNAT family N-acetyltransferase;protein_id=WP_223965248.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 57008 57817 . + . ID=gene-LDO45_RS32010;Name=LDO45_RS32010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32010;old_locus_tag=BDI4_830080 NZ_CAJZAS010000242.1 Protein Homology CDS 57008 57817 . + 0 ID=cds-WP_223965249.1;Parent=gene-LDO45_RS32010;Dbxref=GenBank:WP_223965249.1;Name=WP_223965249.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029254.1;locus_tag=LDO45_RS32010;product=hypothetical protein;protein_id=WP_223965249.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 57823 59637 . + . ID=gene-LDO45_RS32015;Name=LDO45_RS32015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32015;old_locus_tag=BDI4_830081 NZ_CAJZAS010000242.1 Protein Homology CDS 57823 59637 . + 0 ID=cds-WP_223965250.1;Parent=gene-LDO45_RS32015;Dbxref=GenBank:WP_223965250.1;Name=WP_223965250.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749788.1;locus_tag=LDO45_RS32015;product=site-specific integrase;protein_id=WP_223965250.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 59804 60862 . + . ID=gene-LDO45_RS32020;Name=LDO45_RS32020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32020;old_locus_tag=BDI4_830082 NZ_CAJZAS010000242.1 Protein Homology CDS 59804 60862 . + 0 ID=cds-WP_223965251.1;Parent=gene-LDO45_RS32020;Dbxref=GenBank:WP_223965251.1;Name=WP_223965251.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025574.5;locus_tag=LDO45_RS32020;product=STAS-like domain-containing protein;protein_id=WP_223965251.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 61398 61655 . + . ID=gene-LDO45_RS32025;Name=LDO45_RS32025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32025;old_locus_tag=BDI4_830085 NZ_CAJZAS010000242.1 GeneMarkS-2+ CDS 61398 61655 . + 0 ID=cds-WP_223965252.1;Parent=gene-LDO45_RS32025;Dbxref=GenBank:WP_223965252.1;Name=WP_223965252.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS32025;product=hypothetical protein;protein_id=WP_223965252.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 61943 62080 . + . ID=gene-LDO45_RS32030;Name=LDO45_RS32030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32030;old_locus_tag=BDI4_830086 NZ_CAJZAS010000242.1 GeneMarkS-2+ CDS 61943 62080 . + 0 ID=cds-WP_223965253.1;Parent=gene-LDO45_RS32030;Dbxref=GenBank:WP_223965253.1;Name=WP_223965253.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS32030;product=hypothetical protein;protein_id=WP_223965253.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 62280 62519 . + . ID=gene-LDO45_RS32035;Name=LDO45_RS32035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32035;old_locus_tag=BDI4_830088 NZ_CAJZAS010000242.1 Protein Homology CDS 62280 62519 . + 0 ID=cds-WP_223965254.1;Parent=gene-LDO45_RS32035;Dbxref=GenBank:WP_223965254.1;Name=WP_223965254.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734062.1;locus_tag=LDO45_RS32035;product=hypothetical protein;protein_id=WP_223965254.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 62536 62721 . + . ID=gene-LDO45_RS32040;Name=LDO45_RS32040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32040;old_locus_tag=BDI4_830089 NZ_CAJZAS010000242.1 Protein Homology CDS 62536 62721 . + 0 ID=cds-WP_223965255.1;Parent=gene-LDO45_RS32040;Dbxref=GenBank:WP_223965255.1;Name=WP_223965255.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009693541.1;locus_tag=LDO45_RS32040;product=hypothetical protein;protein_id=WP_223965255.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 62852 63169 . + . ID=gene-LDO45_RS32045;Name=LDO45_RS32045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32045;old_locus_tag=BDI4_830090 NZ_CAJZAS010000242.1 GeneMarkS-2+ CDS 62852 63169 . + 0 ID=cds-WP_223965256.1;Parent=gene-LDO45_RS32045;Dbxref=GenBank:WP_223965256.1;Name=WP_223965256.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS32045;product=hypothetical protein;protein_id=WP_223965256.1;transl_table=11 NZ_CAJZAS010000242.1 RefSeq gene 63179 63457 . + . ID=gene-LDO45_RS32050;Name=LDO45_RS32050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32050;old_locus_tag=BDI4_830091 NZ_CAJZAS010000242.1 Protein Homology CDS 63179 63457 . + 0 ID=cds-WP_223965257.1;Parent=gene-LDO45_RS32050;Dbxref=GenBank:WP_223965257.1;Name=WP_223965257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758187.1;locus_tag=LDO45_RS32050;product=hypothetical protein;protein_id=WP_223965257.1;transl_table=11 ##sequence-region NZ_CAJZAS010000243.1 1 44474 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000243.1 RefSeq region 1 44474 . + . ID=NZ_CAJZAS010000243.1:1..44474;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_84 NZ_CAJZAS010000243.1 RefSeq gene 1 530 . - . ID=gene-LDO45_RS32055;Name=LDO45_RS32055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32055;partial=true;start_range=.,1 NZ_CAJZAS010000243.1 Protein Homology CDS 1 530 . - 0 ID=cds-WP_290371049.1;Parent=gene-LDO45_RS32055;Dbxref=GenBank:WP_290371049.1;Name=WP_290371049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004548975.1;locus_tag=LDO45_RS32055;partial=true;product=POTRA domain-containing protein;protein_id=WP_290371049.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 585 1001 . - . ID=gene-LDO45_RS32060;Name=LDO45_RS32060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32060;old_locus_tag=BDI4_840003 NZ_CAJZAS010000243.1 Protein Homology CDS 585 1001 . - 0 ID=cds-WP_223965260.1;Parent=gene-LDO45_RS32060;Dbxref=GenBank:WP_223965260.1;Name=WP_223965260.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011003849.1;locus_tag=LDO45_RS32060;product=hypothetical protein;protein_id=WP_223965260.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 1072 1353 . - . ID=gene-LDO45_RS32065;Name=LDO45_RS32065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32065;old_locus_tag=BDI4_840004 NZ_CAJZAS010000243.1 Protein Homology CDS 1072 1353 . - 0 ID=cds-WP_223965261.1;Parent=gene-LDO45_RS32065;Dbxref=GenBank:WP_223965261.1;Name=WP_223965261.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004541640.1;locus_tag=LDO45_RS32065;product=hypothetical protein;protein_id=WP_223965261.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 1350 10868 . - . ID=gene-LDO45_RS32070;Name=LDO45_RS32070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32070;old_locus_tag=BDI4_840005 NZ_CAJZAS010000243.1 Protein Homology CDS 1350 10868 . - 0 ID=cds-WP_223965262.1;Parent=gene-LDO45_RS32070;Dbxref=GenBank:WP_223965262.1;Name=WP_223965262.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020831487.1;locus_tag=LDO45_RS32070;product=hemagglutinin repeat-containing protein;protein_id=WP_223965262.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 11953 13581 . + . ID=gene-LDO45_RS32075;Name=LDO45_RS32075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32075;old_locus_tag=BDI4_840008 NZ_CAJZAS010000243.1 Protein Homology CDS 11953 13581 . + 0 ID=cds-WP_223965263.1;Parent=gene-LDO45_RS32075;Dbxref=GenBank:WP_223965263.1;Name=WP_223965263.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766794.1;locus_tag=LDO45_RS32075;product=NADP-dependent glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_223965263.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 13673 14305 . - . ID=gene-LDO45_RS32080;Name=LDO45_RS32080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32080;old_locus_tag=BDI4_840009 NZ_CAJZAS010000243.1 Protein Homology CDS 13673 14305 . - 0 ID=cds-WP_059532440.1;Parent=gene-LDO45_RS32080;Dbxref=GenBank:WP_059532440.1;Name=WP_059532440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900368.1;locus_tag=LDO45_RS32080;product=LysE family translocator;protein_id=WP_059532440.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 14925 15248 . + . ID=gene-LDO45_RS32085;Name=LDO45_RS32085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32085;old_locus_tag=BDI4_840010 NZ_CAJZAS010000243.1 Protein Homology CDS 14925 15248 . + 0 ID=cds-WP_059466123.1;Parent=gene-LDO45_RS32085;Dbxref=GenBank:WP_059466123.1;Name=WP_059466123.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900369.1;locus_tag=LDO45_RS32085;product=hypothetical protein;protein_id=WP_059466123.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 15285 16520 . - . ID=gene-LDO45_RS32090;Name=LDO45_RS32090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32090;old_locus_tag=BDI4_840012 NZ_CAJZAS010000243.1 Protein Homology CDS 15285 16520 . - 0 ID=cds-WP_223965264.1;Parent=gene-LDO45_RS32090;Dbxref=GenBank:WP_223965264.1;Name=WP_223965264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009240878.1;locus_tag=LDO45_RS32090;product=NADH:flavin oxidoreductase/NADH oxidase family protein;protein_id=WP_223965264.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 16600 17067 . + . ID=gene-LDO45_RS32095;Name=LDO45_RS32095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32095;old_locus_tag=BDI4_840013 NZ_CAJZAS010000243.1 Protein Homology CDS 16600 17067 . + 0 ID=cds-WP_059690392.1;Parent=gene-LDO45_RS32095;Dbxref=GenBank:WP_059690392.1;Name=WP_059690392.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484623.1;locus_tag=LDO45_RS32095;product=MerR family transcriptional regulator;protein_id=WP_059690392.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 17187 17507 . + . ID=gene-LDO45_RS32100;Name=LDO45_RS32100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32100;old_locus_tag=BDI4_840014 NZ_CAJZAS010000243.1 Protein Homology CDS 17187 17507 . + 0 ID=cds-WP_059532307.1;Parent=gene-LDO45_RS32100;Dbxref=GenBank:WP_059532307.1;Name=WP_059532307.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724414.1;locus_tag=LDO45_RS32100;product=DUF1330 domain-containing protein;protein_id=WP_059532307.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 17536 18372 . - . ID=gene-LDO45_RS32105;Name=LDO45_RS32105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32105;old_locus_tag=BDI4_840015 NZ_CAJZAS010000243.1 Protein Homology CDS 17536 18372 . - 0 ID=cds-WP_059819723.1;Parent=gene-LDO45_RS32105;Dbxref=GenBank:WP_059819723.1;Name=WP_059819723.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365302.1;locus_tag=LDO45_RS32105;product=NAD(P)-dependent oxidoreductase;protein_id=WP_059819723.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 18476 19579 . + . ID=gene-LDO45_RS32110;Name=LDO45_RS32110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32110;old_locus_tag=BDI4_840016 NZ_CAJZAS010000243.1 Protein Homology CDS 18476 19579 . + 0 ID=cds-WP_059690394.1;Parent=gene-LDO45_RS32110;Dbxref=GenBank:WP_059690394.1;Name=WP_059690394.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484546.1;locus_tag=LDO45_RS32110;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_059690394.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 19692 20984 . - . ID=gene-LDO45_RS32115;Name=LDO45_RS32115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32115;old_locus_tag=BDI4_840017 NZ_CAJZAS010000243.1 Protein Homology CDS 19692 20984 . - 0 ID=cds-WP_059532316.1;Parent=gene-LDO45_RS32115;Dbxref=GenBank:WP_059532316.1;Name=WP_059532316.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006749560.1;locus_tag=LDO45_RS32115;product=MFS transporter;protein_id=WP_059532316.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 21328 22803 . + . ID=gene-LDO45_RS32120;Name=LDO45_RS32120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32120;old_locus_tag=BDI4_840018 NZ_CAJZAS010000243.1 Protein Homology CDS 21328 22803 . + 0 ID=cds-WP_223965265.1;Parent=gene-LDO45_RS32120;Dbxref=GenBank:WP_223965265.1;Name=WP_223965265.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694500.1;locus_tag=LDO45_RS32120;product=DNA-3-methyladenine glycosylase 2 family protein;protein_id=WP_223965265.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 22800 23333 . + . ID=gene-LDO45_RS32125;Name=LDO45_RS32125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32125;old_locus_tag=BDI4_840019 NZ_CAJZAS010000243.1 Protein Homology CDS 22800 23333 . + 0 ID=cds-WP_175906847.1;Parent=gene-LDO45_RS32125;Dbxref=GenBank:WP_175906847.1;Name=WP_175906847.1;Ontology_term=GO:0003677,GO:0003908;gbkey=CDS;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495779.1;locus_tag=LDO45_RS32125;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_175906847.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 23370 23867 . - . ID=gene-LDO45_RS32130;Name=LDO45_RS32130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32130;old_locus_tag=BDI4_840020 NZ_CAJZAS010000243.1 Protein Homology CDS 23370 23867 . - 0 ID=cds-WP_059532325.1;Parent=gene-LDO45_RS32130;Dbxref=GenBank:WP_059532325.1;Name=WP_059532325.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724410.1;locus_tag=LDO45_RS32130;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_059532325.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 24025 25854 . + . ID=gene-LDO45_RS32135;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=LDO45_RS32135;old_locus_tag=BDI4_840022 NZ_CAJZAS010000243.1 Protein Homology CDS 24025 25854 . + 0 ID=cds-WP_223965266.1;Parent=gene-LDO45_RS32135;Dbxref=GenBank:WP_223965266.1;Name=WP_223965266.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017330587.1;locus_tag=LDO45_RS32135;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_223965266.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 25909 26721 . - . ID=gene-LDO45_RS32140;Name=LDO45_RS32140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32140;old_locus_tag=BDI4_840023 NZ_CAJZAS010000243.1 Protein Homology CDS 25909 26721 . - 0 ID=cds-WP_059690415.1;Parent=gene-LDO45_RS32140;Dbxref=GenBank:WP_059690415.1;Name=WP_059690415.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365284.1;locus_tag=LDO45_RS32140;product=hypothetical protein;protein_id=WP_059690415.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 26843 27658 . - . ID=gene-LDO45_RS32145;Name=LDO45_RS32145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32145;old_locus_tag=BDI4_840024 NZ_CAJZAS010000243.1 Protein Homology CDS 26843 27658 . - 0 ID=cds-WP_223965267.1;Parent=gene-LDO45_RS32145;Dbxref=GenBank:WP_223965267.1;Name=WP_223965267.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900387.1;locus_tag=LDO45_RS32145;product=helix-turn-helix domain-containing protein;protein_id=WP_223965267.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 27779 28438 . + . ID=gene-LDO45_RS32150;Name=LDO45_RS32150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32150;old_locus_tag=BDI4_840025 NZ_CAJZAS010000243.1 Protein Homology CDS 27779 28438 . + 0 ID=cds-WP_223965268.1;Parent=gene-LDO45_RS32150;Dbxref=GenBank:WP_223965268.1;Name=WP_223965268.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759993.1;locus_tag=LDO45_RS32150;product=glutathione S-transferase family protein;protein_id=WP_223965268.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 28485 29573 . - . ID=gene-LDO45_RS32155;Name=LDO45_RS32155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32155;old_locus_tag=BDI4_840026 NZ_CAJZAS010000243.1 Protein Homology CDS 28485 29573 . - 0 ID=cds-WP_223965269.1;Parent=gene-LDO45_RS32155;Dbxref=GenBank:WP_223965269.1;Name=WP_223965269.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752310.1;locus_tag=LDO45_RS32155;product=porin;protein_id=WP_223965269.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 29819 30154 . - . ID=gene-LDO45_RS32160;Name=LDO45_RS32160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32160;old_locus_tag=BDI4_840027 NZ_CAJZAS010000243.1 Protein Homology CDS 29819 30154 . - 0 ID=cds-WP_223965270.1;Parent=gene-LDO45_RS32160;Dbxref=GenBank:WP_223965270.1;Name=WP_223965270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012365280.1;locus_tag=LDO45_RS32160;product=Rieske 2Fe-2S domain-containing protein;protein_id=WP_223965270.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 30158 30469 . - . ID=gene-LDO45_RS32165;Name=LDO45_RS32165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32165;old_locus_tag=BDI4_840028 NZ_CAJZAS010000243.1 Protein Homology CDS 30158 30469 . - 0 ID=cds-WP_059448054.1;Parent=gene-LDO45_RS32165;Dbxref=GenBank:WP_059448054.1;Name=WP_059448054.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759990.1;locus_tag=LDO45_RS32165;product=YciI family protein;protein_id=WP_059448054.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 30475 31350 . - . ID=gene-LDO45_RS32170;Name=LDO45_RS32170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32170;old_locus_tag=BDI4_840029 NZ_CAJZAS010000243.1 Protein Homology CDS 30475 31350 . - 0 ID=cds-WP_059702958.1;Parent=gene-LDO45_RS32170;Dbxref=GenBank:WP_059702958.1;Name=WP_059702958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752307.1;locus_tag=LDO45_RS32170;product=intradiol ring-cleavage dioxygenase;protein_id=WP_059702958.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 31379 32446 . - . ID=gene-LDO45_RS32175;Name=LDO45_RS32175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32175;old_locus_tag=BDI4_840030 NZ_CAJZAS010000243.1 Protein Homology CDS 31379 32446 . - 0 ID=cds-WP_223965271.1;Parent=gene-LDO45_RS32175;Dbxref=GenBank:WP_223965271.1;Name=WP_223965271.1;Ontology_term=GO:0018506,GO:0030554,GO:0046872;gbkey=CDS;go_function=maleylacetate reductase activity|0018506||IEA,adenyl nucleotide binding|0030554||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484510.1;locus_tag=LDO45_RS32175;product=maleylacetate reductase;protein_id=WP_223965271.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 32454 33920 . - . ID=gene-LDO45_RS32180;Name=LDO45_RS32180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32180;old_locus_tag=BDI4_840031 NZ_CAJZAS010000243.1 Protein Homology CDS 32454 33920 . - 0 ID=cds-WP_059702930.1;Parent=gene-LDO45_RS32180;Dbxref=GenBank:WP_059702930.1;Name=WP_059702930.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900394.1;locus_tag=LDO45_RS32180;product=aldehyde dehydrogenase family protein;protein_id=WP_059702930.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 33953 34972 . - . ID=gene-LDO45_RS32185;Name=LDO45_RS32185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32185;old_locus_tag=BDI4_840032 NZ_CAJZAS010000243.1 Protein Homology CDS 33953 34972 . - 0 ID=cds-WP_059690403.1;Parent=gene-LDO45_RS32185;Dbxref=GenBank:WP_059690403.1;Name=WP_059690403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900395.1;locus_tag=LDO45_RS32185;product=hypothetical protein;protein_id=WP_059690403.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 35014 35508 . - . ID=gene-LDO45_RS32190;Name=LDO45_RS32190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32190;old_locus_tag=BDI4_840033 NZ_CAJZAS010000243.1 Protein Homology CDS 35014 35508 . - 0 ID=cds-WP_223965272.1;Parent=gene-LDO45_RS32190;Dbxref=GenBank:WP_223965272.1;Name=WP_223965272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006399235.1;locus_tag=LDO45_RS32190;product=hydroxyquinol 1%2C2-dioxygenase;protein_id=WP_223965272.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 35623 36552 . - . ID=gene-LDO45_RS32195;Name=LDO45_RS32195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32195;old_locus_tag=BDI4_840034 NZ_CAJZAS010000243.1 Protein Homology CDS 35623 36552 . - 0 ID=cds-WP_059532357.1;Parent=gene-LDO45_RS32195;Dbxref=GenBank:WP_059532357.1;Name=WP_059532357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900397.1;locus_tag=LDO45_RS32195;product=LysR family transcriptional regulator;protein_id=WP_059532357.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 36692 37942 . - . ID=gene-LDO45_RS32200;Name=LDO45_RS32200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32200;old_locus_tag=BDI4_840035 NZ_CAJZAS010000243.1 Protein Homology CDS 36692 37942 . - 0 ID=cds-WP_223965273.1;Parent=gene-LDO45_RS32200;Dbxref=GenBank:WP_223965273.1;Name=WP_223965273.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011660138.1;locus_tag=LDO45_RS32200;product=MFS transporter;protein_id=WP_223965273.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 38448 39932 . + . ID=gene-LDO45_RS32205;Name=LDO45_RS32205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32205;old_locus_tag=BDI4_840036 NZ_CAJZAS010000243.1 Protein Homology CDS 38448 39932 . + 0 ID=cds-WP_223965274.1;Parent=gene-LDO45_RS32205;Dbxref=GenBank:WP_223965274.1;Name=WP_223965274.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900400.1;locus_tag=LDO45_RS32205;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=WP_223965274.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 40016 41131 . - . ID=gene-LDO45_RS32210;Name=LDO45_RS32210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32210;old_locus_tag=BDI4_840037 NZ_CAJZAS010000243.1 Protein Homology CDS 40016 41131 . - 0 ID=cds-WP_223965275.1;Parent=gene-LDO45_RS32210;Dbxref=GenBank:WP_223965275.1;Name=WP_223965275.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012338809.1;locus_tag=LDO45_RS32210;product=DJ-1/PfpI family protein;protein_id=WP_223965275.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 41220 42230 . + . ID=gene-LDO45_RS32215;Name=LDO45_RS32215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32215;old_locus_tag=BDI4_840038 NZ_CAJZAS010000243.1 Protein Homology CDS 41220 42230 . + 0 ID=cds-WP_223965276.1;Parent=gene-LDO45_RS32215;Dbxref=GenBank:WP_223965276.1;Name=WP_223965276.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548378.1;locus_tag=LDO45_RS32215;product=GlxA family transcriptional regulator;protein_id=WP_223965276.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq gene 42527 44059 . + . ID=gene-LDO45_RS32220;Name=LDO45_RS32220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32220;old_locus_tag=BDI4_840040 NZ_CAJZAS010000243.1 Protein Homology CDS 42527 44059 . + 0 ID=cds-WP_175916129.1;Parent=gene-LDO45_RS32220;Dbxref=GenBank:WP_175916129.1;Name=WP_175916129.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752293.1;locus_tag=LDO45_RS32220;product=amino acid permease;protein_id=WP_175916129.1;transl_table=11 NZ_CAJZAS010000243.1 RefSeq pseudogene 44182 44474 . - . ID=gene-LDO45_RS32225;Name=glyA;end_range=44474,.;gbkey=Gene;gene=glyA;gene_biotype=pseudogene;locus_tag=LDO45_RS32225;old_locus_tag=BDI4_840041;partial=true;pseudo=true NZ_CAJZAS010000243.1 Protein Homology CDS 44182 44474 . - 2 ID=cds-LDO45_RS32225;Parent=gene-LDO45_RS32225;Note=catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=44474,.;gbkey=CDS;gene=glyA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012080296.1;locus_tag=LDO45_RS32225;partial=true;product=serine hydroxymethyltransferase;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000244.1 1 11927 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000244.1 RefSeq region 1 11927 . + . ID=NZ_CAJZAS010000244.1:1..11927;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_85 NZ_CAJZAS010000244.1 RefSeq gene 1 368 . + . ID=gene-LDO45_RS32230;Name=LDO45_RS32230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32230;partial=true;start_range=.,1 NZ_CAJZAS010000244.1 Protein Homology CDS 1 368 . + 2 ID=cds-WP_223965278.1;Parent=gene-LDO45_RS32230;Dbxref=GenBank:WP_223965278.1;Name=WP_223965278.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019498.5;locus_tag=LDO45_RS32230;partial=true;product=cupin domain-containing protein;protein_id=WP_223965278.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000244.1 RefSeq gene 365 1576 . + . ID=gene-LDO45_RS32235;Name=LDO45_RS32235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32235;old_locus_tag=BDI4_850002 NZ_CAJZAS010000244.1 Protein Homology CDS 365 1576 . + 0 ID=cds-WP_223965279.1;Parent=gene-LDO45_RS32235;Dbxref=GenBank:WP_223965279.1;Name=WP_223965279.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013658.5;locus_tag=LDO45_RS32235;product=DUF3440 domain-containing protein;protein_id=WP_223965279.1;transl_table=11 NZ_CAJZAS010000244.1 RefSeq gene 1557 2120 . + . ID=gene-LDO45_RS32240;Name=LDO45_RS32240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32240;old_locus_tag=BDI4_850003 NZ_CAJZAS010000244.1 Protein Homology CDS 1557 2120 . + 0 ID=cds-WP_223965280.1;Parent=gene-LDO45_RS32240;Dbxref=GenBank:WP_223965280.1;Name=WP_223965280.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014273.5;locus_tag=LDO45_RS32240;product=ParB N-terminal domain-containing protein;protein_id=WP_223965280.1;transl_table=11 NZ_CAJZAS010000244.1 RefSeq gene 2135 2818 . + . ID=gene-LDO45_RS32245;Name=LDO45_RS32245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32245;old_locus_tag=BDI4_850004 NZ_CAJZAS010000244.1 GeneMarkS-2+ CDS 2135 2818 . + 0 ID=cds-WP_223965281.1;Parent=gene-LDO45_RS32245;Dbxref=GenBank:WP_223965281.1;Name=WP_223965281.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS32245;product=hypothetical protein;protein_id=WP_223965281.1;transl_table=11 NZ_CAJZAS010000244.1 RefSeq gene 2838 3179 . + . ID=gene-LDO45_RS32250;Name=LDO45_RS32250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32250;old_locus_tag=BDI4_850005 NZ_CAJZAS010000244.1 GeneMarkS-2+ CDS 2838 3179 . + 0 ID=cds-WP_223965282.1;Parent=gene-LDO45_RS32250;Dbxref=GenBank:WP_223965282.1;Name=WP_223965282.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS32250;product=hypothetical protein;protein_id=WP_223965282.1;transl_table=11 NZ_CAJZAS010000244.1 RefSeq gene 3292 3744 . + . ID=gene-LDO45_RS32255;Name=LDO45_RS32255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32255;old_locus_tag=BDI4_850006 NZ_CAJZAS010000244.1 Protein Homology CDS 3292 3744 . + 0 ID=cds-WP_223965283.1;Parent=gene-LDO45_RS32255;Dbxref=GenBank:WP_223965283.1;Name=WP_223965283.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015205.5;locus_tag=LDO45_RS32255;product=antirestriction protein;protein_id=WP_223965283.1;transl_table=11 NZ_CAJZAS010000244.1 RefSeq gene 3954 4514 . + . ID=gene-LDO45_RS32260;Name=LDO45_RS32260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32260;old_locus_tag=BDI4_850007 NZ_CAJZAS010000244.1 GeneMarkS-2+ CDS 3954 4514 . + 0 ID=cds-WP_223965284.1;Parent=gene-LDO45_RS32260;Dbxref=GenBank:WP_223965284.1;Name=WP_223965284.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS32260;product=hypothetical protein;protein_id=WP_223965284.1;transl_table=11 NZ_CAJZAS010000244.1 RefSeq gene 4444 6555 . + . ID=gene-LDO45_RS32265;Name=LDO45_RS32265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32265;old_locus_tag=BDI4_850008 NZ_CAJZAS010000244.1 Protein Homology CDS 4444 6555 . + 0 ID=cds-WP_223965285.1;Parent=gene-LDO45_RS32265;Dbxref=GenBank:WP_223965285.1;Name=WP_223965285.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042573.3;locus_tag=LDO45_RS32265;product=phage terminase large subunit family protein;protein_id=WP_223965285.1;transl_table=11 NZ_CAJZAS010000244.1 RefSeq gene 6558 6833 . + . ID=gene-LDO45_RS32270;Name=LDO45_RS32270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32270;old_locus_tag=BDI4_850009 NZ_CAJZAS010000244.1 Protein Homology CDS 6558 6833 . + 0 ID=cds-WP_223965286.1;Parent=gene-LDO45_RS32270;Dbxref=GenBank:WP_223965286.1;Name=WP_223965286.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014846.5;locus_tag=LDO45_RS32270;product=gpW family protein;protein_id=WP_223965286.1;transl_table=11 NZ_CAJZAS010000244.1 RefSeq gene 6843 8537 . + . ID=gene-LDO45_RS32275;Name=LDO45_RS32275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32275;old_locus_tag=BDI4_850010 NZ_CAJZAS010000244.1 Protein Homology CDS 6843 8537 . + 0 ID=cds-WP_223965287.1;Parent=gene-LDO45_RS32275;Dbxref=GenBank:WP_223965287.1;Name=WP_223965287.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004626038.1;locus_tag=LDO45_RS32275;product=phage portal protein;protein_id=WP_223965287.1;transl_table=11 NZ_CAJZAS010000244.1 RefSeq gene 8893 9816 . + . ID=gene-LDO45_RS32280;Name=LDO45_RS32280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32280;old_locus_tag=BDI4_850012 NZ_CAJZAS010000244.1 Protein Homology CDS 8893 9816 . + 0 ID=cds-WP_223965288.1;Parent=gene-LDO45_RS32280;Dbxref=GenBank:WP_223965288.1;Name=WP_223965288.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495264.1;locus_tag=LDO45_RS32280;product=S49 family peptidase;protein_id=WP_223965288.1;transl_table=11 NZ_CAJZAS010000244.1 RefSeq gene 9831 10490 . + . ID=gene-LDO45_RS32285;Name=LDO45_RS32285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32285;old_locus_tag=BDI4_850013 NZ_CAJZAS010000244.1 GeneMarkS-2+ CDS 9831 10490 . + 0 ID=cds-WP_223965289.1;Parent=gene-LDO45_RS32285;Dbxref=GenBank:WP_223965289.1;Name=WP_223965289.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS32285;product=hypothetical protein;protein_id=WP_223965289.1;transl_table=11 NZ_CAJZAS010000244.1 RefSeq gene 10506 11177 . + . ID=gene-LDO45_RS32290;Name=LDO45_RS32290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32290;old_locus_tag=BDI4_850014 NZ_CAJZAS010000244.1 Protein Homology CDS 10506 11177 . + 0 ID=cds-WP_223965290.1;Parent=gene-LDO45_RS32290;Dbxref=GenBank:WP_223965290.1;Name=WP_223965290.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014921.5;locus_tag=LDO45_RS32290;product=head decoration protein;protein_id=WP_223965290.1;transl_table=11 NZ_CAJZAS010000244.1 RefSeq gene 11363 11927 . + . ID=gene-LDO45_RS32295;Name=LDO45_RS32295;end_range=11927,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32295;partial=true NZ_CAJZAS010000244.1 Protein Homology CDS 11363 11927 . + 0 ID=cds-WP_253074759.1;Parent=gene-LDO45_RS32295;Dbxref=GenBank:WP_253074759.1;Name=WP_253074759.1;end_range=11927,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015802.5;locus_tag=LDO45_RS32295;partial=true;product=major capsid protein;protein_id=WP_253074759.1;transl_table=11 ##sequence-region NZ_CAJZAS010000245.1 1 68053 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000245.1 RefSeq region 1 68053 . + . ID=NZ_CAJZAS010000245.1:1..68053;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_86 NZ_CAJZAS010000245.1 RefSeq gene 160 1299 . - . ID=gene-LDO45_RS32300;Name=LDO45_RS32300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32300;old_locus_tag=BDI4_860001 NZ_CAJZAS010000245.1 Protein Homology CDS 160 1299 . - 0 ID=cds-WP_059531190.1;Parent=gene-LDO45_RS32300;Dbxref=GenBank:WP_059531190.1;Name=WP_059531190.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734190.1;locus_tag=LDO45_RS32300;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_059531190.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 1384 5316 . - . ID=gene-LDO45_RS32305;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=LDO45_RS32305;old_locus_tag=BDI4_860002 NZ_CAJZAS010000245.1 Protein Homology CDS 1384 5316 . - 0 ID=cds-WP_223965292.1;Parent=gene-LDO45_RS32305;Dbxref=GenBank:WP_223965292.1;Name=WP_223965292.1;Ontology_term=GO:0006355,GO:0006561,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,1-pyrroline-5-carboxylate dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,proline biosynthetic process|0006561||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600251.1;locus_tag=LDO45_RS32305;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_223965292.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 5701 7962 . - . ID=gene-LDO45_RS32310;Name=LDO45_RS32310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32310;old_locus_tag=BDI4_860004 NZ_CAJZAS010000245.1 Protein Homology CDS 5701 7962 . - 0 ID=cds-WP_223965293.1;Parent=gene-LDO45_RS32310;Dbxref=GenBank:WP_223965293.1;Name=WP_223965293.1;Ontology_term=GO:0006260,GO:0032508,GO:0003678;gbkey=CDS;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA,DNA duplex unwinding|0032508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327608.1;locus_tag=LDO45_RS32310;product=primosomal protein N';protein_id=WP_223965293.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 8411 9505 . - . ID=gene-LDO45_RS32315;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=LDO45_RS32315;old_locus_tag=BDI4_860006 NZ_CAJZAS010000245.1 Protein Homology CDS 8411 9505 . - 0 ID=cds-WP_279610106.1;Parent=gene-LDO45_RS32315;Dbxref=GenBank:WP_279610106.1;Name=WP_279610106.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_043290608.1;locus_tag=LDO45_RS32315;product=uroporphyrinogen decarboxylase;protein_id=WP_279610106.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 9655 10464 . + . ID=gene-LDO45_RS32320;Name=LDO45_RS32320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32320;old_locus_tag=BDI4_860007 NZ_CAJZAS010000245.1 Protein Homology CDS 9655 10464 . + 0 ID=cds-WP_223965294.1;Parent=gene-LDO45_RS32320;Dbxref=GenBank:WP_223965294.1;Name=WP_223965294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655622.1;locus_tag=LDO45_RS32320;product=transporter substrate-binding domain-containing protein;protein_id=WP_223965294.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 11167 12894 . - . ID=gene-LDO45_RS32325;Name=LDO45_RS32325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32325;old_locus_tag=BDI4_860009 NZ_CAJZAS010000245.1 Protein Homology CDS 11167 12894 . - 0 ID=cds-WP_223965295.1;Parent=gene-LDO45_RS32325;Dbxref=GenBank:WP_223965295.1;Name=WP_223965295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895502.1;locus_tag=LDO45_RS32325;product=AMP-binding protein;protein_id=WP_223965295.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 13154 13579 . - . ID=gene-LDO45_RS32330;Name=LDO45_RS32330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32330;old_locus_tag=BDI4_860010 NZ_CAJZAS010000245.1 Protein Homology CDS 13154 13579 . - 0 ID=cds-WP_006477288.1;Parent=gene-LDO45_RS32330;Dbxref=GenBank:WP_006477288.1;Name=WP_006477288.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010107215.1;locus_tag=LDO45_RS32330;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_006477288.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 13684 15078 . - . ID=gene-LDO45_RS32335;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=LDO45_RS32335;old_locus_tag=BDI4_860011 NZ_CAJZAS010000245.1 Protein Homology CDS 13684 15078 . - 0 ID=cds-WP_059531206.1;Parent=gene-LDO45_RS32335;Dbxref=GenBank:WP_059531206.1;Name=WP_059531206.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261,GO:0045262;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007180028.1;locus_tag=LDO45_RS32335;product=F0F1 ATP synthase subunit beta;protein_id=WP_059531206.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 15145 16020 . - . ID=gene-LDO45_RS32340;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=LDO45_RS32340;old_locus_tag=BDI4_860012 NZ_CAJZAS010000245.1 Protein Homology CDS 15145 16020 . - 0 ID=cds-WP_034188170.1;Parent=gene-LDO45_RS32340;Dbxref=GenBank:WP_034188170.1;Name=WP_034188170.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004195831.1;locus_tag=LDO45_RS32340;product=F0F1 ATP synthase subunit gamma;protein_id=WP_034188170.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 16090 17631 . - . ID=gene-LDO45_RS32345;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=LDO45_RS32345;old_locus_tag=BDI4_860013 NZ_CAJZAS010000245.1 Protein Homology CDS 16090 17631 . - 0 ID=cds-WP_014895499.1;Parent=gene-LDO45_RS32345;Dbxref=GenBank:WP_014895499.1;Name=WP_014895499.1;Ontology_term=GO:0015986,GO:0046933,GO:0045261,GO:0045262;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex%2C catalytic core F(1)|0045261||IEA,plasma membrane proton-transporting ATP synthase complex%2C catalytic core F(1)|0045262||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524507.1;locus_tag=LDO45_RS32345;product=F0F1 ATP synthase subunit alpha;protein_id=WP_014895499.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 17676 18215 . - . ID=gene-LDO45_RS32350;Name=LDO45_RS32350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32350;old_locus_tag=BDI4_860014 NZ_CAJZAS010000245.1 Protein Homology CDS 17676 18215 . - 0 ID=cds-WP_014895498.1;Parent=gene-LDO45_RS32350;Dbxref=GenBank:WP_014895498.1;Name=WP_014895498.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895498.1;locus_tag=LDO45_RS32350;product=F0F1 ATP synthase subunit delta;protein_id=WP_014895498.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 18218 18688 . - . ID=gene-LDO45_RS32355;Name=LDO45_RS32355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32355;old_locus_tag=BDI4_860015 NZ_CAJZAS010000245.1 Protein Homology CDS 18218 18688 . - 0 ID=cds-WP_006477283.1;Parent=gene-LDO45_RS32355;Dbxref=GenBank:WP_006477283.1;Name=WP_006477283.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017772246.1;locus_tag=LDO45_RS32355;product=F0F1 ATP synthase subunit B;protein_id=WP_006477283.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 18818 19087 . - . ID=gene-LDO45_RS32360;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=LDO45_RS32360;old_locus_tag=BDI4_860016 NZ_CAJZAS010000245.1 Protein Homology CDS 18818 19087 . - 0 ID=cds-WP_006482730.1;Parent=gene-LDO45_RS32360;Dbxref=GenBank:WP_006482730.1;Name=WP_006482730.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012734176.1;locus_tag=LDO45_RS32360;product=F0F1 ATP synthase subunit C;protein_id=WP_006482730.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 19163 20014 . - . ID=gene-LDO45_RS32365;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=LDO45_RS32365;old_locus_tag=BDI4_860017 NZ_CAJZAS010000245.1 Protein Homology CDS 19163 20014 . - 0 ID=cds-WP_223965296.1;Parent=gene-LDO45_RS32365;Dbxref=GenBank:WP_223965296.1;Name=WP_223965296.1;Ontology_term=GO:0015986,GO:0015078,GO:0045263;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex%2C coupling factor F(o)|0045263||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011204192.1;locus_tag=LDO45_RS32365;product=F0F1 ATP synthase subunit A;protein_id=WP_223965296.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 20125 20652 . - . ID=gene-LDO45_RS32370;Name=LDO45_RS32370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32370;old_locus_tag=BDI4_860018 NZ_CAJZAS010000245.1 Protein Homology CDS 20125 20652 . - 0 ID=cds-WP_059531211.1;Parent=gene-LDO45_RS32370;Dbxref=GenBank:WP_059531211.1;Name=WP_059531211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401468.1;locus_tag=LDO45_RS32370;product=ATP synthase subunit I;protein_id=WP_059531211.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 21226 22356 . - . ID=gene-LDO45_RS32375;Name=LDO45_RS32375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32375;old_locus_tag=BDI4_860020 NZ_CAJZAS010000245.1 Protein Homology CDS 21226 22356 . - 0 ID=cds-WP_223965297.1;Parent=gene-LDO45_RS32375;Dbxref=GenBank:WP_223965297.1;Name=WP_223965297.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496314.1;locus_tag=LDO45_RS32375;product=SLC13 family permease;protein_id=WP_223965297.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 22370 23263 . - . ID=gene-LDO45_RS32380;Name=LDO45_RS32380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32380;old_locus_tag=BDI4_860021 NZ_CAJZAS010000245.1 Protein Homology CDS 22370 23263 . - 0 ID=cds-WP_059531410.1;Parent=gene-LDO45_RS32380;Dbxref=GenBank:WP_059531410.1;Name=WP_059531410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895494.1;locus_tag=LDO45_RS32380;product=ParB/RepB/Spo0J family partition protein;protein_id=WP_059531410.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 23295 24074 . - . ID=gene-LDO45_RS32385;Name=LDO45_RS32385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32385;old_locus_tag=BDI4_860022 NZ_CAJZAS010000245.1 Protein Homology CDS 23295 24074 . - 0 ID=cds-WP_044845234.1;Parent=gene-LDO45_RS32385;Dbxref=GenBank:WP_044845234.1;Name=WP_044845234.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895493.1;locus_tag=LDO45_RS32385;product=ParA family protein;protein_id=WP_044845234.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 24126 24812 . - . ID=gene-LDO45_RS32390;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=LDO45_RS32390;old_locus_tag=BDI4_860023 NZ_CAJZAS010000245.1 Protein Homology CDS 24126 24812 . - 0 ID=cds-WP_223965298.1;Parent=gene-LDO45_RS32390;Dbxref=GenBank:WP_223965298.1;Name=WP_223965298.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006756475.1;locus_tag=LDO45_RS32390;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_223965298.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 24809 26779 . - . ID=gene-LDO45_RS32395;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=LDO45_RS32395;old_locus_tag=BDI4_860024 NZ_CAJZAS010000245.1 Protein Homology CDS 24809 26779 . - 0 ID=cds-WP_223965299.1;Parent=gene-LDO45_RS32395;Dbxref=GenBank:WP_223965299.1;Name=WP_223965299.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010093113.1;locus_tag=LDO45_RS32395;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_223965299.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 26888 27034 . - . ID=gene-LDO45_RS32400;Name=LDO45_RS32400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32400 NZ_CAJZAS010000245.1 GeneMarkS-2+ CDS 26888 27034 . - 0 ID=cds-WP_223965300.1;Parent=gene-LDO45_RS32400;Dbxref=GenBank:WP_223965300.1;Name=WP_223965300.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS32400;product=hypothetical protein;protein_id=WP_223965300.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 27294 28049 . - . ID=gene-LDO45_RS32405;Name=LDO45_RS32405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32405;old_locus_tag=BDI4_860026 NZ_CAJZAS010000245.1 Protein Homology CDS 27294 28049 . - 0 ID=cds-WP_223965301.1;Parent=gene-LDO45_RS32405;Dbxref=GenBank:WP_223965301.1;Name=WP_223965301.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895489.1;locus_tag=LDO45_RS32405;product=ABC transporter ATP-binding protein;protein_id=WP_223965301.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 28049 29833 . - . ID=gene-LDO45_RS32410;Name=LDO45_RS32410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32410;old_locus_tag=BDI4_860027 NZ_CAJZAS010000245.1 Protein Homology CDS 28049 29833 . - 0 ID=cds-WP_223965302.1;Parent=gene-LDO45_RS32410;Dbxref=GenBank:WP_223965302.1;Name=WP_223965302.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011655609.1;locus_tag=LDO45_RS32410;product=ATP-binding cassette domain-containing protein;protein_id=WP_223965302.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 29838 30893 . - . ID=gene-LDO45_RS32415;Name=LDO45_RS32415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32415;old_locus_tag=BDI4_860028 NZ_CAJZAS010000245.1 Protein Homology CDS 29838 30893 . - 0 ID=cds-WP_223965303.1;Parent=gene-LDO45_RS32415;Dbxref=GenBank:WP_223965303.1;Name=WP_223965303.1;Ontology_term=GO:0015658,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401477.1;locus_tag=LDO45_RS32415;product=branched-chain amino acid ABC transporter permease;protein_id=WP_223965303.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 31095 32252 . - . ID=gene-LDO45_RS32420;Name=LDO45_RS32420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32420;old_locus_tag=BDI4_860029 NZ_CAJZAS010000245.1 Protein Homology CDS 31095 32252 . - 0 ID=cds-WP_223965304.1;Parent=gene-LDO45_RS32420;Dbxref=GenBank:WP_223965304.1;Name=WP_223965304.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762981.1;locus_tag=LDO45_RS32420;product=ABC transporter substrate-binding protein;protein_id=WP_223965304.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 33368 34342 . - . ID=gene-LDO45_RS32425;Name=LDO45_RS32425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32425;old_locus_tag=BDI4_860030 NZ_CAJZAS010000245.1 Protein Homology CDS 33368 34342 . - 0 ID=cds-WP_059699721.1;Parent=gene-LDO45_RS32425;Dbxref=GenBank:WP_059699721.1;Name=WP_059699721.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600354.1;locus_tag=LDO45_RS32425;product=branched-chain amino acid ABC transporter permease;protein_id=WP_059699721.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 34342 35226 . - . ID=gene-LDO45_RS32430;Name=LDO45_RS32430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32430;old_locus_tag=BDI4_860031 NZ_CAJZAS010000245.1 Protein Homology CDS 34342 35226 . - 0 ID=cds-WP_059691495.1;Parent=gene-LDO45_RS32430;Dbxref=GenBank:WP_059691495.1;Name=WP_059691495.1;Ontology_term=GO:0015658,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401481.1;locus_tag=LDO45_RS32430;product=branched-chain amino acid ABC transporter permease;protein_id=WP_059691495.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 35341 36540 . - . ID=gene-LDO45_RS32435;Name=LDO45_RS32435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32435;old_locus_tag=BDI4_860032 NZ_CAJZAS010000245.1 Protein Homology CDS 35341 36540 . - 0 ID=cds-WP_059531235.1;Parent=gene-LDO45_RS32435;Dbxref=GenBank:WP_059531235.1;Name=WP_059531235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185183.1;locus_tag=LDO45_RS32435;product=ABC transporter substrate-binding protein;protein_id=WP_059531235.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 36618 37373 . - . ID=gene-LDO45_RS32440;Name=LDO45_RS32440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32440;old_locus_tag=BDI4_860033 NZ_CAJZAS010000245.1 Protein Homology CDS 36618 37373 . - 0 ID=cds-WP_059465973.1;Parent=gene-LDO45_RS32440;Dbxref=GenBank:WP_059465973.1;Name=WP_059465973.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006023954.1;locus_tag=LDO45_RS32440;product=ABC transporter ATP-binding protein;protein_id=WP_059465973.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 37370 38149 . - . ID=gene-LDO45_RS32445;Name=LDO45_RS32445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32445;old_locus_tag=BDI4_860034 NZ_CAJZAS010000245.1 Protein Homology CDS 37370 38149 . - 0 ID=cds-WP_040142748.1;Parent=gene-LDO45_RS32445;Dbxref=GenBank:WP_040142748.1;Name=WP_040142748.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008917939.1;locus_tag=LDO45_RS32445;product=ABC transporter ATP-binding protein;protein_id=WP_040142748.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 38621 40306 . - . ID=gene-LDO45_RS32450;Name=LDO45_RS32450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32450;old_locus_tag=BDI4_860035 NZ_CAJZAS010000245.1 Protein Homology CDS 38621 40306 . - 0 ID=cds-WP_223965305.1;Parent=gene-LDO45_RS32450;Dbxref=GenBank:WP_223965305.1;Name=WP_223965305.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751333.1;locus_tag=LDO45_RS32450;product=GMC family oxidoreductase;protein_id=WP_223965305.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 40470 41369 . + . ID=gene-LDO45_RS32455;Name=LDO45_RS32455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32455;old_locus_tag=BDI4_860036 NZ_CAJZAS010000245.1 Protein Homology CDS 40470 41369 . + 0 ID=cds-WP_223965306.1;Parent=gene-LDO45_RS32455;Dbxref=GenBank:WP_223965306.1;Name=WP_223965306.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004556010.1;locus_tag=LDO45_RS32455;product=LysR family transcriptional regulator;protein_id=WP_223965306.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 41580 42113 . + . ID=gene-LDO45_RS32460;Name=LDO45_RS32460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32460;old_locus_tag=BDI4_860037 NZ_CAJZAS010000245.1 Protein Homology CDS 41580 42113 . + 0 ID=cds-WP_059531241.1;Parent=gene-LDO45_RS32460;Dbxref=GenBank:WP_059531241.1;Name=WP_059531241.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546816.1;locus_tag=LDO45_RS32460;product=class IV adenylate cyclase;protein_id=WP_059531241.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 42167 42652 . - . ID=gene-LDO45_RS32465;Name=LDO45_RS32465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32465;old_locus_tag=BDI4_860038 NZ_CAJZAS010000245.1 Protein Homology CDS 42167 42652 . - 0 ID=cds-WP_223965307.1;Parent=gene-LDO45_RS32465;Dbxref=GenBank:WP_223965307.1;Name=WP_223965307.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010093131.1;locus_tag=LDO45_RS32465;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_223965307.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 42737 43684 . + . ID=gene-LDO45_RS32470;Name=phhA;gbkey=Gene;gene=phhA;gene_biotype=protein_coding;locus_tag=LDO45_RS32470;old_locus_tag=BDI4_860039 NZ_CAJZAS010000245.1 Protein Homology CDS 42737 43684 . + 0 ID=cds-WP_223965308.1;Parent=gene-LDO45_RS32470;Dbxref=GenBank:WP_223965308.1;Name=WP_223965308.1;Ontology_term=GO:0006559,GO:0004505;gbkey=CDS;gene=phhA;go_function=phenylalanine 4-monooxygenase activity|0004505||IEA;go_process=L-phenylalanine catabolic process|0006559||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546817.1;locus_tag=LDO45_RS32470;product=phenylalanine 4-monooxygenase;protein_id=WP_223965308.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 43843 44151 . + . ID=gene-LDO45_RS32475;Name=LDO45_RS32475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32475;old_locus_tag=BDI4_860040 NZ_CAJZAS010000245.1 Protein Homology CDS 43843 44151 . + 0 ID=cds-WP_059691493.1;Parent=gene-LDO45_RS32475;Dbxref=GenBank:WP_059691493.1;Name=WP_059691493.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694015.1;locus_tag=LDO45_RS32475;product=4a-hydroxytetrahydrobiopterin dehydratase;protein_id=WP_059691493.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 44244 44474 . - . ID=gene-LDO45_RS32480;Name=LDO45_RS32480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32480;old_locus_tag=BDI4_860041 NZ_CAJZAS010000245.1 Protein Homology CDS 44244 44474 . - 0 ID=cds-WP_006756491.1;Parent=gene-LDO45_RS32480;Dbxref=GenBank:WP_006756491.1;Name=WP_006756491.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401493.1;locus_tag=LDO45_RS32480;product=DUF3717 domain-containing protein;protein_id=WP_006756491.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 44598 45290 . + . ID=gene-LDO45_RS32485;Name=LDO45_RS32485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32485;old_locus_tag=BDI4_860042 NZ_CAJZAS010000245.1 Protein Homology CDS 44598 45290 . + 0 ID=cds-WP_006401494.1;Parent=gene-LDO45_RS32485;Dbxref=GenBank:WP_006401494.1;Name=WP_006401494.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006401494.1;locus_tag=LDO45_RS32485;product=response regulator transcription factor;protein_id=WP_006401494.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 45407 46891 . + . ID=gene-LDO45_RS32490;Name=LDO45_RS32490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32490;old_locus_tag=BDI4_860043 NZ_CAJZAS010000245.1 Protein Homology CDS 45407 46891 . + 0 ID=cds-WP_059531258.1;Parent=gene-LDO45_RS32490;Dbxref=GenBank:WP_059531258.1;Name=WP_059531258.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012492237.1;locus_tag=LDO45_RS32490;product=sensor histidine kinase;protein_id=WP_059531258.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 46983 47507 . - . ID=gene-LDO45_RS32495;Name=LDO45_RS32495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32495;old_locus_tag=BDI4_860044 NZ_CAJZAS010000245.1 Protein Homology CDS 46983 47507 . - 0 ID=cds-WP_223965309.1;Parent=gene-LDO45_RS32495;Dbxref=GenBank:WP_223965309.1;Name=WP_223965309.1;Ontology_term=GO:0005515,GO:0016279,GO:1904047;gbkey=CDS;go_function=protein binding|0005515||IEA,protein-lysine N-methyltransferase activity|0016279||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012362746.1;locus_tag=LDO45_RS32495;product=SET domain-containing protein;protein_id=WP_223965309.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 47696 48808 . - . ID=gene-LDO45_RS32500;Name=LDO45_RS32500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32500;old_locus_tag=BDI4_860046 NZ_CAJZAS010000245.1 Protein Homology CDS 47696 48808 . - 0 ID=cds-WP_223965310.1;Parent=gene-LDO45_RS32500;Dbxref=GenBank:WP_223965310.1;Name=WP_223965310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010093147.1;locus_tag=LDO45_RS32500;product=NADH:flavin oxidoreductase/NADH oxidase;protein_id=WP_223965310.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 49011 49721 . - . ID=gene-LDO45_RS32505;Name=LDO45_RS32505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32505;old_locus_tag=BDI4_860047 NZ_CAJZAS010000245.1 Protein Homology CDS 49011 49721 . - 0 ID=cds-WP_059531420.1;Parent=gene-LDO45_RS32505;Dbxref=GenBank:WP_059531420.1;Name=WP_059531420.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015601196.1;locus_tag=LDO45_RS32505;product=glutamine amidotransferase;protein_id=WP_059531420.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 49750 50388 . - . ID=gene-LDO45_RS32510;Name=LDO45_RS32510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32510;old_locus_tag=BDI4_860048 NZ_CAJZAS010000245.1 Protein Homology CDS 49750 50388 . - 0 ID=cds-WP_059531266.1;Parent=gene-LDO45_RS32510;Dbxref=GenBank:WP_059531266.1;Name=WP_059531266.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006408074.1;locus_tag=LDO45_RS32510;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_059531266.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 50893 52008 . - . ID=gene-LDO45_RS32515;Name=LDO45_RS32515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32515;old_locus_tag=BDI4_860049 NZ_CAJZAS010000245.1 Protein Homology CDS 50893 52008 . - 0 ID=cds-WP_034183814.1;Parent=gene-LDO45_RS32515;Dbxref=GenBank:WP_034183814.1;Name=WP_034183814.1;Ontology_term=GO:0042398,GO:0004357;gbkey=CDS;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=cellular modified amino acid biosynthetic process|0042398||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334758.1;locus_tag=LDO45_RS32515;product=YbdK family carboxylate-amine ligase;protein_id=WP_034183814.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 52024 53238 . - . ID=gene-LDO45_RS32520;Name=LDO45_RS32520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32520;old_locus_tag=BDI4_860050 NZ_CAJZAS010000245.1 Protein Homology CDS 52024 53238 . - 0 ID=cds-WP_059531269.1;Parent=gene-LDO45_RS32520;Dbxref=GenBank:WP_059531269.1;Name=WP_059531269.1;Ontology_term=GO:0006812,GO:0055085,GO:1902600;gbkey=CDS;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015602304.1;locus_tag=LDO45_RS32520;product=cation:proton antiporter;protein_id=WP_059531269.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 53914 55875 . - . ID=gene-LDO45_RS32525;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=LDO45_RS32525;old_locus_tag=BDI4_860051 NZ_CAJZAS010000245.1 Protein Homology CDS 53914 55875 . - 0 ID=cds-WP_223965311.1;Parent=gene-LDO45_RS32525;Dbxref=GenBank:WP_223965311.1;Name=WP_223965311.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759201.1;locus_tag=LDO45_RS32525;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC;protein_id=WP_223965311.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 56265 56543 . + . ID=gene-LDO45_RS32530;Name=LDO45_RS32530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32530;old_locus_tag=BDI4_860053 NZ_CAJZAS010000245.1 Protein Homology CDS 56265 56543 . + 0 ID=cds-WP_006401505.1;Parent=gene-LDO45_RS32530;Dbxref=GenBank:WP_006401505.1;Name=WP_006401505.1;Ontology_term=GO:0030261,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008352404.1;locus_tag=LDO45_RS32530;product=HU family DNA-binding protein;protein_id=WP_006401505.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 56687 58000 . - . ID=gene-LDO45_RS32535;Name=LDO45_RS32535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32535;old_locus_tag=BDI4_860054 NZ_CAJZAS010000245.1 Protein Homology CDS 56687 58000 . - 0 ID=cds-WP_223965312.1;Parent=gene-LDO45_RS32535;Dbxref=GenBank:WP_223965312.1;Name=WP_223965312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006759200.1;locus_tag=LDO45_RS32535;product=GTP-binding protein;protein_id=WP_223965312.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 58159 58608 . - . ID=gene-LDO45_RS32540;Name=LDO45_RS32540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32540;old_locus_tag=BDI4_860055 NZ_CAJZAS010000245.1 Protein Homology CDS 58159 58608 . - 0 ID=cds-WP_059691488.1;Parent=gene-LDO45_RS32540;Dbxref=GenBank:WP_059691488.1;Name=WP_059691488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751349.1;locus_tag=LDO45_RS32540;product=lytic transglycosylase domain-containing protein;protein_id=WP_059691488.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 58976 61288 . + . ID=gene-LDO45_RS32545;Name=gspD;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=LDO45_RS32545;old_locus_tag=BDI4_860056 NZ_CAJZAS010000245.1 Protein Homology CDS 58976 61288 . + 0 ID=cds-WP_223965313.1;Parent=gene-LDO45_RS32545;Dbxref=GenBank:WP_223965313.1;Name=WP_223965313.1;Ontology_term=GO:0015628,GO:0015627,GO:0019867;gbkey=CDS;gene=gspD;go_component=type II protein secretion system complex|0015627||IEA,outer membrane|0019867||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327586.1;locus_tag=LDO45_RS32545;product=type II secretion system secretin GspD;protein_id=WP_223965313.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 61285 62784 . + . ID=gene-LDO45_RS32550;Name=gspE;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=LDO45_RS32550;old_locus_tag=BDI4_860057 NZ_CAJZAS010000245.1 Protein Homology CDS 61285 62784 . + 0 ID=cds-WP_059531283.1;Parent=gene-LDO45_RS32550;Dbxref=GenBank:WP_059531283.1;Name=WP_059531283.1;Ontology_term=GO:0015628,GO:0005524,GO:0015627;gbkey=CDS;gene=gspE;go_component=type II protein secretion system complex|0015627||IEA;go_function=ATP binding|0005524||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009906747.1;locus_tag=LDO45_RS32550;product=type II secretion system ATPase GspE;protein_id=WP_059531283.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 62789 64006 . + . ID=gene-LDO45_RS32555;Name=gspF;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=LDO45_RS32555;old_locus_tag=BDI4_860058 NZ_CAJZAS010000245.1 Protein Homology CDS 62789 64006 . + 0 ID=cds-WP_059531287.1;Parent=gene-LDO45_RS32555;Dbxref=GenBank:WP_059531287.1;Name=WP_059531287.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspF;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006477248.1;locus_tag=LDO45_RS32555;product=type II secretion system inner membrane protein GspF;protein_id=WP_059531287.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 64037 64447 . - . ID=gene-LDO45_RS32560;Name=LDO45_RS32560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32560;old_locus_tag=BDI4_860059 NZ_CAJZAS010000245.1 Protein Homology CDS 64037 64447 . - 0 ID=cds-WP_059448336.1;Parent=gene-LDO45_RS32560;Dbxref=GenBank:WP_059448336.1;Name=WP_059448336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009910818.1;locus_tag=LDO45_RS32560;product=type II secretion system protein N;protein_id=WP_059448336.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 64625 65077 . + . ID=gene-LDO45_RS32565;Name=gspG;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=LDO45_RS32565;old_locus_tag=BDI4_860060 NZ_CAJZAS010000245.1 Protein Homology CDS 64625 65077 . + 0 ID=cds-WP_059531290.1;Parent=gene-LDO45_RS32565;Dbxref=GenBank:WP_059531290.1;Name=WP_059531290.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspG;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751354.1;locus_tag=LDO45_RS32565;product=type II secretion system major pseudopilin GspG;protein_id=WP_059531290.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 65121 65663 . + . ID=gene-LDO45_RS32570;Name=LDO45_RS32570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32570;old_locus_tag=BDI4_860061 NZ_CAJZAS010000245.1 Protein Homology CDS 65121 65663 . + 0 ID=cds-WP_059531294.1;Parent=gene-LDO45_RS32570;Dbxref=GenBank:WP_059531294.1;Name=WP_059531294.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006751355.1;locus_tag=LDO45_RS32570;product=GspH/FimT family pseudopilin;protein_id=WP_059531294.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 65660 66064 . + . ID=gene-LDO45_RS32575;Name=gspI;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=LDO45_RS32575;old_locus_tag=BDI4_860062 NZ_CAJZAS010000245.1 Protein Homology CDS 65660 66064 . + 0 ID=cds-WP_059531297.1;Parent=gene-LDO45_RS32575;Dbxref=GenBank:WP_059531297.1;Name=WP_059531297.1;Ontology_term=GO:0015628,GO:0015627;gbkey=CDS;gene=gspI;go_component=type II protein secretion system complex|0015627||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004524538.1;locus_tag=LDO45_RS32575;product=type II secretion system minor pseudopilin GspI;protein_id=WP_059531297.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 66042 66746 . + . ID=gene-LDO45_RS32580;Name=LDO45_RS32580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32580;old_locus_tag=BDI4_860063 NZ_CAJZAS010000245.1 Protein Homology CDS 66042 66746 . + 0 ID=cds-WP_059531300.1;Parent=gene-LDO45_RS32580;Dbxref=GenBank:WP_059531300.1;Name=WP_059531300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004185018.1;locus_tag=LDO45_RS32580;product=type II secretion system protein J;protein_id=WP_059531300.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq gene 66749 67876 . + . ID=gene-LDO45_RS32585;Name=gspK;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=LDO45_RS32585;old_locus_tag=BDI4_860064 NZ_CAJZAS010000245.1 Protein Homology CDS 66749 67876 . + 0 ID=cds-WP_059531422.1;Parent=gene-LDO45_RS32585;Dbxref=GenBank:WP_059531422.1;Name=WP_059531422.1;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=gspK;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012327583.1;locus_tag=LDO45_RS32585;product=type II secretion system minor pseudopilin GspK;protein_id=WP_059531422.1;transl_table=11 NZ_CAJZAS010000245.1 RefSeq pseudogene 67901 68053 . + . ID=gene-LDO45_RS32590;Name=LDO45_RS32590;end_range=68053,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS32590;partial=true;pseudo=true NZ_CAJZAS010000245.1 Protein Homology CDS 67901 68053 . + 0 ID=cds-LDO45_RS32590;Parent=gene-LDO45_RS32590;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=68053,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011544455.1;locus_tag=LDO45_RS32590;partial=true;product=type II secretion system protein GspL;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000246.1 1 52567 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000246.1 RefSeq region 1 52567 . + . ID=NZ_CAJZAS010000246.1:1..52567;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_87 NZ_CAJZAS010000246.1 RefSeq gene 1 1311 . - . ID=gene-LDO45_RS32595;Name=LDO45_RS32595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32595;partial=true;start_range=.,1 NZ_CAJZAS010000246.1 Protein Homology CDS 1 1311 . - 0 ID=cds-WP_223965314.1;Parent=gene-LDO45_RS32595;Dbxref=GenBank:WP_223965314.1;Name=WP_223965314.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004549625.1;locus_tag=LDO45_RS32595;partial=true;product=APC family permease;protein_id=WP_223965314.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 1565 2905 . - . ID=gene-LDO45_RS32600;Name=LDO45_RS32600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32600;old_locus_tag=BDI4_870002 NZ_CAJZAS010000246.1 Protein Homology CDS 1565 2905 . - 0 ID=cds-WP_223965315.1;Parent=gene-LDO45_RS32600;Dbxref=GenBank:WP_223965315.1;Name=WP_223965315.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755270.1;locus_tag=LDO45_RS32600;product=aspartate aminotransferase family protein;protein_id=WP_223965315.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 2994 4496 . - . ID=gene-LDO45_RS32605;Name=LDO45_RS32605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32605;old_locus_tag=BDI4_870003 NZ_CAJZAS010000246.1 Protein Homology CDS 2994 4496 . - 0 ID=cds-WP_223965316.1;Parent=gene-LDO45_RS32605;Dbxref=GenBank:WP_223965316.1;Name=WP_223965316.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755271.1;locus_tag=LDO45_RS32605;product=aldehyde dehydrogenase family protein;protein_id=WP_223965316.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 4644 5384 . - . ID=gene-LDO45_RS32610;Name=LDO45_RS32610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32610;old_locus_tag=BDI4_870004 NZ_CAJZAS010000246.1 Protein Homology CDS 4644 5384 . - 0 ID=cds-WP_223965317.1;Parent=gene-LDO45_RS32610;Dbxref=GenBank:WP_223965317.1;Name=WP_223965317.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760754.1;locus_tag=LDO45_RS32610;product=helix-turn-helix transcriptional regulator;protein_id=WP_223965317.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 5705 6583 . - . ID=gene-LDO45_RS32615;Name=LDO45_RS32615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32615;old_locus_tag=BDI4_870005 NZ_CAJZAS010000246.1 Protein Homology CDS 5705 6583 . - 0 ID=cds-WP_059692171.1;Parent=gene-LDO45_RS32615;Dbxref=GenBank:WP_059692171.1;Name=WP_059692171.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366438.1;locus_tag=LDO45_RS32615;product=neutral zinc metallopeptidase;protein_id=WP_059692171.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 6978 7769 . + . ID=gene-LDO45_RS32620;Name=LDO45_RS32620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32620;old_locus_tag=BDI4_870006 NZ_CAJZAS010000246.1 Protein Homology CDS 6978 7769 . + 0 ID=cds-WP_223965318.1;Parent=gene-LDO45_RS32620;Dbxref=GenBank:WP_223965318.1;Name=WP_223965318.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547357.1;locus_tag=LDO45_RS32620;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_223965318.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 8053 9033 . - . ID=gene-LDO45_RS32625;Name=LDO45_RS32625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32625;old_locus_tag=BDI4_870007 NZ_CAJZAS010000246.1 Protein Homology CDS 8053 9033 . - 0 ID=cds-WP_223965319.1;Parent=gene-LDO45_RS32625;Dbxref=GenBank:WP_223965319.1;Name=WP_223965319.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758089.1;locus_tag=LDO45_RS32625;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_223965319.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 9133 10032 . + . ID=gene-LDO45_RS32630;Name=LDO45_RS32630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32630;old_locus_tag=BDI4_870008 NZ_CAJZAS010000246.1 Protein Homology CDS 9133 10032 . + 0 ID=cds-WP_223965320.1;Parent=gene-LDO45_RS32630;Dbxref=GenBank:WP_223965320.1;Name=WP_223965320.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216654.1;locus_tag=LDO45_RS32630;product=LysR family transcriptional regulator;protein_id=WP_223965320.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 10073 10393 . - . ID=gene-LDO45_RS32635;Name=LDO45_RS32635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32635;old_locus_tag=BDI4_870009 NZ_CAJZAS010000246.1 Protein Homology CDS 10073 10393 . - 0 ID=cds-WP_059692167.1;Parent=gene-LDO45_RS32635;Dbxref=GenBank:WP_059692167.1;Name=WP_059692167.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339716.1;locus_tag=LDO45_RS32635;product=hypothetical protein;protein_id=WP_059692167.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 10589 11461 . - . ID=gene-LDO45_RS32640;Name=LDO45_RS32640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32640;old_locus_tag=BDI4_870010 NZ_CAJZAS010000246.1 Protein Homology CDS 10589 11461 . - 0 ID=cds-WP_223965321.1;Parent=gene-LDO45_RS32640;Dbxref=GenBank:WP_223965321.1;Name=WP_223965321.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898832.1;locus_tag=LDO45_RS32640;product=LysR family transcriptional regulator;protein_id=WP_223965321.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 11599 13059 . + . ID=gene-LDO45_RS32645;Name=LDO45_RS32645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32645;old_locus_tag=BDI4_870011 NZ_CAJZAS010000246.1 Protein Homology CDS 11599 13059 . + 0 ID=cds-WP_223965322.1;Parent=gene-LDO45_RS32645;Dbxref=GenBank:WP_223965322.1;Name=WP_223965322.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496843.1;locus_tag=LDO45_RS32645;product=MFS transporter;protein_id=WP_223965322.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 13129 13326 . - . ID=gene-LDO45_RS32650;Name=LDO45_RS32650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32650;old_locus_tag=BDI4_870012 NZ_CAJZAS010000246.1 Protein Homology CDS 13129 13326 . - 0 ID=cds-WP_059468460.1;Parent=gene-LDO45_RS32650;Dbxref=GenBank:WP_059468460.1;Name=WP_059468460.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725372.1;locus_tag=LDO45_RS32650;product=oxidoreductase-like domain-containing protein;protein_id=WP_059468460.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 13504 14217 . - . ID=gene-LDO45_RS32655;Name=LDO45_RS32655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32655;old_locus_tag=BDI4_870013 NZ_CAJZAS010000246.1 Protein Homology CDS 13504 14217 . - 0 ID=cds-WP_223965323.1;Parent=gene-LDO45_RS32655;Dbxref=GenBank:WP_223965323.1;Name=WP_223965323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758094.1;locus_tag=LDO45_RS32655;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_223965323.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 14515 15192 . + . ID=gene-LDO45_RS32660;Name=LDO45_RS32660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32660;old_locus_tag=BDI4_870014 NZ_CAJZAS010000246.1 Protein Homology CDS 14515 15192 . + 0 ID=cds-WP_223965324.1;Parent=gene-LDO45_RS32660;Dbxref=GenBank:WP_223965324.1;Name=WP_223965324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547343.1;locus_tag=LDO45_RS32660;product=dihydrodipicolinate reductase C-terminal domain-containing protein;protein_id=WP_223965324.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 15275 16084 . - . ID=gene-LDO45_RS32665;Name=LDO45_RS32665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32665;old_locus_tag=BDI4_870015 NZ_CAJZAS010000246.1 Protein Homology CDS 15275 16084 . - 0 ID=cds-WP_223965325.1;Parent=gene-LDO45_RS32665;Dbxref=GenBank:WP_223965325.1;Name=WP_223965325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898821.1;locus_tag=LDO45_RS32665;product=SDR family oxidoreductase;protein_id=WP_223965325.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 16081 16914 . - . ID=gene-LDO45_RS32670;Name=LDO45_RS32670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32670;old_locus_tag=BDI4_870016 NZ_CAJZAS010000246.1 Protein Homology CDS 16081 16914 . - 0 ID=cds-WP_223965326.1;Parent=gene-LDO45_RS32670;Dbxref=GenBank:WP_223965326.1;Name=WP_223965326.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547341.1;locus_tag=LDO45_RS32670;product=molybdenum cofactor biosynthesis F family protein;protein_id=WP_223965326.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 17085 17879 . + . ID=gene-LDO45_RS32675;Name=LDO45_RS32675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32675;old_locus_tag=BDI4_870017 NZ_CAJZAS010000246.1 Protein Homology CDS 17085 17879 . + 0 ID=cds-WP_223965327.1;Parent=gene-LDO45_RS32675;Dbxref=GenBank:WP_223965327.1;Name=WP_223965327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758098.1;locus_tag=LDO45_RS32675;product=AraC family transcriptional regulator;protein_id=WP_223965327.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 18085 19008 . + . ID=gene-LDO45_RS32680;Name=LDO45_RS32680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32680;old_locus_tag=BDI4_870018 NZ_CAJZAS010000246.1 Protein Homology CDS 18085 19008 . + 0 ID=cds-WP_223965328.1;Parent=gene-LDO45_RS32680;Dbxref=GenBank:WP_223965328.1;Name=WP_223965328.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396657.1;locus_tag=LDO45_RS32680;product=DMT family transporter;protein_id=WP_223965328.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 19160 19708 . + . ID=gene-LDO45_RS32685;Name=LDO45_RS32685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32685;old_locus_tag=BDI4_870019 NZ_CAJZAS010000246.1 Protein Homology CDS 19160 19708 . + 0 ID=cds-WP_223965345.1;Parent=gene-LDO45_RS32685;Dbxref=GenBank:WP_223965345.1;Name=WP_223965345.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485834.1;locus_tag=LDO45_RS32685;product=permease;protein_id=WP_223965345.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 19799 19933 . - . ID=gene-LDO45_RS32690;Name=LDO45_RS32690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32690;old_locus_tag=BDI4_870020 NZ_CAJZAS010000246.1 Protein Homology CDS 19799 19933 . - 0 ID=cds-WP_059449563.1;Parent=gene-LDO45_RS32690;Dbxref=GenBank:WP_059449563.1;Name=WP_059449563.1;Ontology_term=GO:0009636,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=response to toxic substance|0009636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010109044.1;locus_tag=LDO45_RS32690;product=entericidin A/B family lipoprotein;protein_id=WP_059449563.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 20169 21464 . + . ID=gene-LDO45_RS32695;Name=LDO45_RS32695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32695;old_locus_tag=BDI4_870021 NZ_CAJZAS010000246.1 Protein Homology CDS 20169 21464 . + 0 ID=cds-WP_223965329.1;Parent=gene-LDO45_RS32695;Dbxref=GenBank:WP_223965329.1;Name=WP_223965329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019254972.1;locus_tag=LDO45_RS32695;product=aspartate carbamoyltransferase;protein_id=WP_223965329.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 21553 21972 . - . ID=gene-LDO45_RS32700;Name=LDO45_RS32700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32700;old_locus_tag=BDI4_870022 NZ_CAJZAS010000246.1 Protein Homology CDS 21553 21972 . - 0 ID=cds-WP_223965330.1;Parent=gene-LDO45_RS32700;Dbxref=GenBank:WP_223965330.1;Name=WP_223965330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012349326.1;locus_tag=LDO45_RS32700;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_223965330.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 21969 22208 . - . ID=gene-LDO45_RS32705;Name=LDO45_RS32705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32705;old_locus_tag=BDI4_870023 NZ_CAJZAS010000246.1 Protein Homology CDS 21969 22208 . - 0 ID=cds-WP_059527196.1;Parent=gene-LDO45_RS32705;Dbxref=GenBank:WP_059527196.1;Name=WP_059527196.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003812071.1;locus_tag=LDO45_RS32705;product=Arc family DNA-binding protein;protein_id=WP_059527196.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 22531 24774 . + . ID=gene-LDO45_RS32710;Name=LDO45_RS32710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32710;old_locus_tag=BDI4_870024 NZ_CAJZAS010000246.1 Protein Homology CDS 22531 24774 . + 0 ID=cds-WP_223965331.1;Parent=gene-LDO45_RS32710;Dbxref=GenBank:WP_223965331.1;Name=WP_223965331.1;Ontology_term=GO:0015891,GO:0015343;gbkey=CDS;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004543178.1;locus_tag=LDO45_RS32710;product=TonB-dependent siderophore receptor;protein_id=WP_223965331.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 24778 25533 . + . ID=gene-LDO45_RS32715;Name=LDO45_RS32715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32715;old_locus_tag=BDI4_870026 NZ_CAJZAS010000246.1 Protein Homology CDS 24778 25533 . + 0 ID=cds-WP_223965332.1;Parent=gene-LDO45_RS32715;Dbxref=GenBank:WP_223965332.1;Name=WP_223965332.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485843.1;locus_tag=LDO45_RS32715;product=tetratricopeptide repeat protein;protein_id=WP_223965332.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 25530 26213 . + . ID=gene-LDO45_RS32720;Name=LDO45_RS32720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32720;old_locus_tag=BDI4_870025 NZ_CAJZAS010000246.1 Protein Homology CDS 25530 26213 . + 0 ID=cds-WP_223965333.1;Parent=gene-LDO45_RS32720;Dbxref=GenBank:WP_223965333.1;Name=WP_223965333.1;Ontology_term=GO:0016705;gbkey=CDS;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089453.1;locus_tag=LDO45_RS32720;product=Fe2+-dependent dioxygenase;protein_id=WP_223965333.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 26584 27168 . + . ID=gene-LDO45_RS32725;Name=LDO45_RS32725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32725;old_locus_tag=BDI4_870028 NZ_CAJZAS010000246.1 Protein Homology CDS 26584 27168 . + 0 ID=cds-WP_059526676.1;Parent=gene-LDO45_RS32725;Dbxref=GenBank:WP_059526676.1;Name=WP_059526676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396642.1;locus_tag=LDO45_RS32725;product=NTP transferase domain-containing protein;protein_id=WP_059526676.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 27369 27512 . + . ID=gene-LDO45_RS32730;Name=LDO45_RS32730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32730;old_locus_tag=BDI4_870029 NZ_CAJZAS010000246.1 Protein Homology CDS 27369 27512 . + 0 ID=cds-WP_006752960.1;Parent=gene-LDO45_RS32730;Dbxref=GenBank:WP_006752960.1;Name=WP_006752960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752960.1;locus_tag=LDO45_RS32730;product=hypothetical protein;protein_id=WP_006752960.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 27541 28299 . - . ID=gene-LDO45_RS32735;Name=LDO45_RS32735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32735;old_locus_tag=BDI4_870030 NZ_CAJZAS010000246.1 Protein Homology CDS 27541 28299 . - 0 ID=cds-WP_059692157.1;Parent=gene-LDO45_RS32735;Dbxref=GenBank:WP_059692157.1;Name=WP_059692157.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004191609.1;locus_tag=LDO45_RS32735;product=SDR family oxidoreductase;protein_id=WP_059692157.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 28296 29843 . - . ID=gene-LDO45_RS32740;Name=LDO45_RS32740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32740;old_locus_tag=BDI4_870031 NZ_CAJZAS010000246.1 Protein Homology CDS 28296 29843 . - 0 ID=cds-WP_223965334.1;Parent=gene-LDO45_RS32740;Dbxref=GenBank:WP_223965334.1;Name=WP_223965334.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485839.1;locus_tag=LDO45_RS32740;product=FGGY-family carbohydrate kinase;protein_id=WP_223965334.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 29878 30966 . - . ID=gene-LDO45_RS32745;Name=LDO45_RS32745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32745;old_locus_tag=BDI4_870032 NZ_CAJZAS010000246.1 Protein Homology CDS 29878 30966 . - 0 ID=cds-WP_059819399.1;Parent=gene-LDO45_RS32745;Dbxref=GenBank:WP_059819399.1;Name=WP_059819399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366468.1;locus_tag=LDO45_RS32745;product=alcohol dehydrogenase catalytic domain-containing protein;protein_id=WP_059819399.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 31013 32020 . - . ID=gene-LDO45_RS32750;Name=LDO45_RS32750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32750;old_locus_tag=BDI4_870033 NZ_CAJZAS010000246.1 Protein Homology CDS 31013 32020 . - 0 ID=cds-WP_223965335.1;Parent=gene-LDO45_RS32750;Dbxref=GenBank:WP_223965335.1;Name=WP_223965335.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216635.1;locus_tag=LDO45_RS32750;product=ABC transporter permease;protein_id=WP_223965335.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 32007 33527 . - . ID=gene-LDO45_RS32755;Name=LDO45_RS32755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32755;old_locus_tag=BDI4_870034 NZ_CAJZAS010000246.1 Protein Homology CDS 32007 33527 . - 0 ID=cds-WP_223965346.1;Parent=gene-LDO45_RS32755;Dbxref=GenBank:WP_223965346.1;Name=WP_223965346.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396635.1;locus_tag=LDO45_RS32755;product=sugar ABC transporter ATP-binding protein;protein_id=WP_223965346.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 33590 34531 . - . ID=gene-LDO45_RS32760;Name=LDO45_RS32760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32760;old_locus_tag=BDI4_870035 NZ_CAJZAS010000246.1 Protein Homology CDS 33590 34531 . - 0 ID=cds-WP_223965336.1;Parent=gene-LDO45_RS32760;Dbxref=GenBank:WP_223965336.1;Name=WP_223965336.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496167.1;locus_tag=LDO45_RS32760;product=substrate-binding domain-containing protein;protein_id=WP_223965336.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 34650 35609 . - . ID=gene-LDO45_RS32765;Name=LDO45_RS32765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32765;old_locus_tag=BDI4_870036 NZ_CAJZAS010000246.1 Protein Homology CDS 34650 35609 . - 0 ID=cds-WP_059526694.1;Parent=gene-LDO45_RS32765;Dbxref=GenBank:WP_059526694.1;Name=WP_059526694.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480884.1;locus_tag=LDO45_RS32765;product=AraC family transcriptional regulator;protein_id=WP_059526694.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 35905 36843 . - . ID=gene-LDO45_RS32770;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=LDO45_RS32770;old_locus_tag=BDI4_870037 NZ_CAJZAS010000246.1 Protein Homology CDS 35905 36843 . - 0 ID=cds-WP_059526697.1;Parent=gene-LDO45_RS32770;Dbxref=GenBank:WP_059526697.1;Name=WP_059526697.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216631.1;locus_tag=LDO45_RS32770;product=2-dehydropantoate 2-reductase;protein_id=WP_059526697.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 37102 38655 . + . ID=gene-LDO45_RS32775;Name=LDO45_RS32775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32775;old_locus_tag=BDI4_870038 NZ_CAJZAS010000246.1 Protein Homology CDS 37102 38655 . + 0 ID=cds-WP_223965337.1;Parent=gene-LDO45_RS32775;Dbxref=GenBank:WP_223965337.1;Name=WP_223965337.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216630.1;locus_tag=LDO45_RS32775;product=methyl-accepting chemotaxis protein;protein_id=WP_223965337.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 38778 39455 . - . ID=gene-LDO45_RS32780;Name=LDO45_RS32780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32780;old_locus_tag=BDI4_870039 NZ_CAJZAS010000246.1 Protein Homology CDS 38778 39455 . - 0 ID=cds-WP_059526704.1;Parent=gene-LDO45_RS32780;Dbxref=GenBank:WP_059526704.1;Name=WP_059526704.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366475.1;locus_tag=LDO45_RS32780;product=response regulator transcription factor;protein_id=WP_059526704.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 39829 40320 . + . ID=gene-LDO45_RS32785;Name=LDO45_RS32785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32785;old_locus_tag=BDI4_870040 NZ_CAJZAS010000246.1 Protein Homology CDS 39829 40320 . + 0 ID=cds-WP_223965338.1;Parent=gene-LDO45_RS32785;Dbxref=GenBank:WP_223965338.1;Name=WP_223965338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898793.1;locus_tag=LDO45_RS32785;product=hypothetical protein;protein_id=WP_223965338.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 40396 41817 . - . ID=gene-LDO45_RS32790;Name=LDO45_RS32790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32790;old_locus_tag=BDI4_870041 NZ_CAJZAS010000246.1 Protein Homology CDS 40396 41817 . - 0 ID=cds-WP_223965339.1;Parent=gene-LDO45_RS32790;Dbxref=GenBank:WP_223965339.1;Name=WP_223965339.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354484.1;locus_tag=LDO45_RS32790;product=sigma-54 dependent transcriptional regulator;protein_id=WP_223965339.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 41930 42514 . - . ID=gene-LDO45_RS32795;Name=LDO45_RS32795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32795;old_locus_tag=BDI4_870042 NZ_CAJZAS010000246.1 Protein Homology CDS 41930 42514 . - 0 ID=cds-WP_223965340.1;Parent=gene-LDO45_RS32795;Dbxref=GenBank:WP_223965340.1;Name=WP_223965340.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480876.1;locus_tag=LDO45_RS32795;product=hypothetical protein;protein_id=WP_223965340.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 42671 44233 . - . ID=gene-LDO45_RS32800;Name=LDO45_RS32800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32800;old_locus_tag=BDI4_870043 NZ_CAJZAS010000246.1 Protein Homology CDS 42671 44233 . - 0 ID=cds-WP_223965341.1;Parent=gene-LDO45_RS32800;Dbxref=GenBank:WP_223965341.1;Name=WP_223965341.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012216625.1;locus_tag=LDO45_RS32800;product=chemotaxis protein CheA;protein_id=WP_223965341.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 44278 44556 . - . ID=gene-LDO45_RS32805;Name=LDO45_RS32805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32805;old_locus_tag=BDI4_870044 NZ_CAJZAS010000246.1 Protein Homology CDS 44278 44556 . - 0 ID=cds-WP_223965342.1;Parent=gene-LDO45_RS32805;Dbxref=GenBank:WP_223965342.1;Name=WP_223965342.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547315.1;locus_tag=LDO45_RS32805;product=hypothetical protein;protein_id=WP_223965342.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 44632 45222 . - . ID=gene-LDO45_RS32810;Name=LDO45_RS32810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32810;old_locus_tag=BDI4_870045 NZ_CAJZAS010000246.1 Protein Homology CDS 44632 45222 . - 0 ID=cds-WP_059526722.1;Parent=gene-LDO45_RS32810;Dbxref=GenBank:WP_059526722.1;Name=WP_059526722.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014725386.1;locus_tag=LDO45_RS32810;product=hypothetical protein;protein_id=WP_059526722.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 45334 45660 . - . ID=gene-LDO45_RS32815;Name=LDO45_RS32815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32815;old_locus_tag=BDI4_870046 NZ_CAJZAS010000246.1 Protein Homology CDS 45334 45660 . - 0 ID=cds-WP_059527202.1;Parent=gene-LDO45_RS32815;Dbxref=GenBank:WP_059527202.1;Name=WP_059527202.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006396622.1;locus_tag=LDO45_RS32815;product=hypothetical protein;protein_id=WP_059527202.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 45906 46082 . - . ID=gene-LDO45_RS32820;Name=LDO45_RS32820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32820;old_locus_tag=BDI4_870048 NZ_CAJZAS010000246.1 GeneMarkS-2+ CDS 45906 46082 . - 0 ID=cds-WP_223965343.1;Parent=gene-LDO45_RS32820;Dbxref=GenBank:WP_223965343.1;Name=WP_223965343.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS32820;product=hypothetical protein;protein_id=WP_223965343.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 47137 47301 . - . ID=gene-LDO45_RS32825;Name=LDO45_RS32825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32825 NZ_CAJZAS010000246.1 GeneMarkS-2+ CDS 47137 47301 . - 0 ID=cds-WP_156441366.1;Parent=gene-LDO45_RS32825;Dbxref=GenBank:WP_156441366.1;Name=WP_156441366.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS32825;product=hypothetical protein;protein_id=WP_156441366.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 47566 48492 . - . ID=gene-LDO45_RS32830;Name=LDO45_RS32830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32830;old_locus_tag=BDI4_870052 NZ_CAJZAS010000246.1 Protein Homology CDS 47566 48492 . - 0 ID=cds-WP_059692145.1;Parent=gene-LDO45_RS32830;Dbxref=GenBank:WP_059692145.1;Name=WP_059692145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659200.1;locus_tag=LDO45_RS32830;product=AraC family transcriptional regulator;protein_id=WP_059692145.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 48676 49137 . + . ID=gene-LDO45_RS32835;Name=LDO45_RS32835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32835;old_locus_tag=BDI4_870053 NZ_CAJZAS010000246.1 Protein Homology CDS 48676 49137 . + 0 ID=cds-WP_059468378.1;Parent=gene-LDO45_RS32835;Dbxref=GenBank:WP_059468378.1;Name=WP_059468378.1;Ontology_term=GO:0046872,GO:0051536,GO:0051537;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017328867.1;locus_tag=LDO45_RS32835;product=(2Fe-2S)-binding protein;protein_id=WP_059468378.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 49140 51350 . + . ID=gene-LDO45_RS32840;Name=LDO45_RS32840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32840;old_locus_tag=BDI4_870054 NZ_CAJZAS010000246.1 Protein Homology CDS 49140 51350 . + 0 ID=cds-WP_223965344.1;Parent=gene-LDO45_RS32840;Dbxref=GenBank:WP_223965344.1;Name=WP_223965344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659201.1;locus_tag=LDO45_RS32840;product=xanthine dehydrogenase family protein molybdopterin-binding subunit;protein_id=WP_223965344.1;transl_table=11 NZ_CAJZAS010000246.1 RefSeq gene 51812 52210 . + . ID=gene-LDO45_RS32845;Name=LDO45_RS32845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32845;old_locus_tag=BDI4_870055 NZ_CAJZAS010000246.1 Protein Homology CDS 51812 52210 . + 0 ID=cds-WP_059526731.1;Parent=gene-LDO45_RS32845;Dbxref=GenBank:WP_059526731.1;Name=WP_059526731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006754334.1;locus_tag=LDO45_RS32845;product=winged helix-turn-helix domain-containing protein;protein_id=WP_059526731.1;transl_table=11 ##sequence-region NZ_CAJZAS010000247.1 1 695 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000247.1 RefSeq region 1 695 . + . ID=NZ_CAJZAS010000247.1:1..695;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_88 ##sequence-region NZ_CAJZAS010000248.1 1 1303 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000248.1 RefSeq region 1 1303 . + . ID=NZ_CAJZAS010000248.1:1..1303;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_89 NZ_CAJZAS010000248.1 RefSeq pseudogene 518 1303 . + . ID=gene-LDO45_RS32850;Name=LDO45_RS32850;end_range=1303,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS32850;partial=true;pseudo=true NZ_CAJZAS010000248.1 Protein Homology CDS 518 1303 . + 0 ID=cds-LDO45_RS32850;Parent=gene-LDO45_RS32850;Note=frameshifted%3B too many ambiguous residues%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=1303,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004197902.1;locus_tag=LDO45_RS32850;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000249.1 1 28662 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000249.1 RefSeq region 1 28662 . + . ID=NZ_CAJZAS010000249.1:1..28662;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_9 NZ_CAJZAS010000249.1 RefSeq pseudogene 1 171 . - . ID=gene-LDO45_RS32855;Name=LDO45_RS32855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS32855;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000249.1 Protein Homology CDS 1 171 . - 0 ID=cds-LDO45_RS32855;Parent=gene-LDO45_RS32855;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657287.1;locus_tag=LDO45_RS32855;partial=true;product=pseudouridine synthase;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq pseudogene 188 2716 . - . ID=gene-LDO45_RS32860;Name=LDO45_RS32860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS32860;old_locus_tag=BDI4_90002;pseudo=true NZ_CAJZAS010000249.1 Protein Homology CDS 188 2716 . - 0 ID=cds-LDO45_RS32860;Parent=gene-LDO45_RS32860;Note=too many ambiguous residues;Ontology_term=GO:0008152,GO:0008773;gbkey=CDS;go_function=[protein-PII] uridylyltransferase activity|0008773||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885147.1;locus_tag=LDO45_RS32860;product=[protein-PII] uridylyltransferase;pseudo=true;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 2767 3582 . - . ID=gene-LDO45_RS32865;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=LDO45_RS32865;old_locus_tag=BDI4_90003 NZ_CAJZAS010000249.1 Protein Homology CDS 2767 3582 . - 0 ID=cds-WP_012328760.1;Parent=gene-LDO45_RS32865;Dbxref=GenBank:WP_012328760.1;Name=WP_012328760.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478487.1;locus_tag=LDO45_RS32865;product=type I methionyl aminopeptidase;protein_id=WP_012328760.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 3971 4711 . + . ID=gene-LDO45_RS32870;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=LDO45_RS32870;old_locus_tag=BDI4_90004 NZ_CAJZAS010000249.1 Protein Homology CDS 3971 4711 . + 0 ID=cds-WP_006483818.1;Parent=gene-LDO45_RS32870;Dbxref=GenBank:WP_006483818.1;Name=WP_006483818.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011885144.1;locus_tag=LDO45_RS32870;product=30S ribosomal protein S2;protein_id=WP_006483818.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 4874 5755 . + . ID=gene-LDO45_RS32875;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=LDO45_RS32875;old_locus_tag=BDI4_90005 NZ_CAJZAS010000249.1 Protein Homology CDS 4874 5755 . + 0 ID=cds-WP_034188848.1;Parent=gene-LDO45_RS32875;Dbxref=GenBank:WP_034188848.1;Name=WP_034188848.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352460.1;locus_tag=LDO45_RS32875;product=translation elongation factor Ts;protein_id=WP_034188848.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 5912 6625 . + . ID=gene-LDO45_RS32880;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=LDO45_RS32880;old_locus_tag=BDI4_90006 NZ_CAJZAS010000249.1 Protein Homology CDS 5912 6625 . + 0 ID=cds-WP_011885142.1;Parent=gene-LDO45_RS32880;Dbxref=GenBank:WP_011885142.1;Name=WP_011885142.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010104618.1;locus_tag=LDO45_RS32880;product=UMP kinase;protein_id=WP_011885142.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 6728 7288 . + . ID=gene-LDO45_RS32885;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=LDO45_RS32885;old_locus_tag=BDI4_90007 NZ_CAJZAS010000249.1 Protein Homology CDS 6728 7288 . + 0 ID=cds-WP_006752152.1;Parent=gene-LDO45_RS32885;Dbxref=GenBank:WP_006752152.1;Name=WP_006752152.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192143.1;locus_tag=LDO45_RS32885;product=ribosome recycling factor;protein_id=WP_006752152.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 7338 8120 . + . ID=gene-LDO45_RS32890;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=LDO45_RS32890;old_locus_tag=BDI4_90008 NZ_CAJZAS010000249.1 Protein Homology CDS 7338 8120 . + 0 ID=cds-WP_006758563.1;Parent=gene-LDO45_RS32890;Dbxref=GenBank:WP_006758563.1;Name=WP_006758563.1;Ontology_term=GO:0009252,GO:0005737;gbkey=CDS;gene=uppS;go_component=cytoplasm|0005737||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092065.1;locus_tag=LDO45_RS32890;product=polyprenyl diphosphate synthase;protein_id=WP_006758563.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 8114 8935 . + . ID=gene-LDO45_RS32895;Name=LDO45_RS32895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32895;old_locus_tag=BDI4_90009 NZ_CAJZAS010000249.1 Protein Homology CDS 8114 8935 . + 0 ID=cds-WP_223965347.1;Parent=gene-LDO45_RS32895;Dbxref=GenBank:WP_223965347.1;Name=WP_223965347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896737.1;locus_tag=LDO45_RS32895;product=phosphatidate cytidylyltransferase;protein_id=WP_223965347.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 8951 10147 . + . ID=gene-LDO45_RS32900;Name=LDO45_RS32900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32900;old_locus_tag=BDI4_90010 NZ_CAJZAS010000249.1 Protein Homology CDS 8951 10147 . + 0 ID=cds-WP_059529323.1;Parent=gene-LDO45_RS32900;Dbxref=GenBank:WP_059529323.1;Name=WP_059529323.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478497.1;locus_tag=LDO45_RS32900;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_059529323.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 10159 11547 . + . ID=gene-LDO45_RS32905;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=LDO45_RS32905;old_locus_tag=BDI4_90011 NZ_CAJZAS010000249.1 Protein Homology CDS 10159 11547 . + 0 ID=cds-WP_223965348.1;Parent=gene-LDO45_RS32905;Dbxref=GenBank:WP_223965348.1;Name=WP_223965348.1;Ontology_term=GO:0006508,GO:0004222,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004521191.1;locus_tag=LDO45_RS32905;product=RIP metalloprotease RseP;protein_id=WP_223965348.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 11612 13918 . + . ID=gene-LDO45_RS32910;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=LDO45_RS32910;old_locus_tag=BDI4_90012 NZ_CAJZAS010000249.1 Protein Homology CDS 11612 13918 . + 0 ID=cds-WP_059691997.1;Parent=gene-LDO45_RS32910;Dbxref=GenBank:WP_059691997.1;Name=WP_059691997.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758559.1;locus_tag=LDO45_RS32910;product=outer membrane protein assembly factor BamA;protein_id=WP_059691997.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 13983 14480 . + . ID=gene-LDO45_RS32915;Name=LDO45_RS32915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32915;old_locus_tag=BDI4_90013 NZ_CAJZAS010000249.1 Protein Homology CDS 13983 14480 . + 0 ID=cds-WP_059529330.1;Parent=gene-LDO45_RS32915;Dbxref=GenBank:WP_059529330.1;Name=WP_059529330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352452.1;locus_tag=LDO45_RS32915;product=OmpH family outer membrane protein;protein_id=WP_059529330.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 14497 15591 . + . ID=gene-LDO45_RS32920;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=LDO45_RS32920;old_locus_tag=BDI4_90014 NZ_CAJZAS010000249.1 Protein Homology CDS 14497 15591 . + 0 ID=cds-WP_059691996.1;Parent=gene-LDO45_RS32920;Dbxref=GenBank:WP_059691996.1;Name=WP_059691996.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328756.1;locus_tag=LDO45_RS32920;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_059691996.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 15721 16188 . + . ID=gene-LDO45_RS32925;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=LDO45_RS32925;old_locus_tag=BDI4_90015 NZ_CAJZAS010000249.1 Protein Homology CDS 15721 16188 . + 0 ID=cds-WP_006495559.1;Parent=gene-LDO45_RS32925;Dbxref=GenBank:WP_006495559.1;Name=WP_006495559.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192266.1;locus_tag=LDO45_RS32925;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_006495559.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 16256 17044 . + . ID=gene-LDO45_RS32930;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=LDO45_RS32930;old_locus_tag=BDI4_90016 NZ_CAJZAS010000249.1 Protein Homology CDS 16256 17044 . + 0 ID=cds-WP_059701563.1;Parent=gene-LDO45_RS32930;Dbxref=GenBank:WP_059701563.1;Name=WP_059701563.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193051.1;locus_tag=LDO45_RS32930;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_059701563.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 17048 18217 . + . ID=gene-LDO45_RS32935;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=LDO45_RS32935;old_locus_tag=BDI4_90017 NZ_CAJZAS010000249.1 Protein Homology CDS 17048 18217 . + 0 ID=cds-WP_059529340.1;Parent=gene-LDO45_RS32935;Dbxref=GenBank:WP_059529340.1;Name=WP_059529340.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213142.1;locus_tag=LDO45_RS32935;product=lipid-A-disaccharide synthase;protein_id=WP_059529340.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 18214 18858 . + . ID=gene-LDO45_RS32940;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=LDO45_RS32940;old_locus_tag=BDI4_90018 NZ_CAJZAS010000249.1 Protein Homology CDS 18214 18858 . + 0 ID=cds-WP_223965349.1;Parent=gene-LDO45_RS32940;Dbxref=GenBank:WP_223965349.1;Name=WP_223965349.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010092075.1;locus_tag=LDO45_RS32940;product=ribonuclease HII;protein_id=WP_223965349.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 18855 19637 . + . ID=gene-LDO45_RS32945;Name=LDO45_RS32945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32945;old_locus_tag=BDI4_90019 NZ_CAJZAS010000249.1 Protein Homology CDS 18855 19637 . + 0 ID=cds-WP_059529345.1;Parent=gene-LDO45_RS32945;Dbxref=GenBank:WP_059529345.1;Name=WP_059529345.1;Ontology_term=GO:0001510,GO:0008173,GO:0016740;gbkey=CDS;go_function=RNA methyltransferase activity|0008173||IEA,transferase activity|0016740||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478506.1;locus_tag=LDO45_RS32945;product=RNA methyltransferase;protein_id=WP_059529345.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 19757 20572 . - . ID=gene-LDO45_RS32950;Name=LDO45_RS32950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32950;old_locus_tag=BDI4_90020 NZ_CAJZAS010000249.1 Protein Homology CDS 19757 20572 . - 0 ID=cds-WP_059450011.1;Parent=gene-LDO45_RS32950;Dbxref=GenBank:WP_059450011.1;Name=WP_059450011.1;Ontology_term=GO:0006468,GO:0006470,GO:0004674,GO:0005524,GO:0016776;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=protein phosphorylation|0006468||IEA,protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010104596.1;locus_tag=LDO45_RS32950;product=pyruvate%2C water dikinase regulatory protein;protein_id=WP_059450011.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 20949 23348 . + . ID=gene-LDO45_RS32955;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=LDO45_RS32955;old_locus_tag=BDI4_90021 NZ_CAJZAS010000249.1 Protein Homology CDS 20949 23348 . + 0 ID=cds-WP_059529348.1;Parent=gene-LDO45_RS32955;Dbxref=GenBank:WP_059529348.1;Name=WP_059529348.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006026079.1;locus_tag=LDO45_RS32955;product=phosphoenolpyruvate synthase;protein_id=WP_059529348.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 23567 24001 . + . ID=gene-LDO45_RS32960;Name=LDO45_RS32960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32960;old_locus_tag=BDI4_90023 NZ_CAJZAS010000249.1 Protein Homology CDS 23567 24001 . + 0 ID=cds-WP_059529350.1;Parent=gene-LDO45_RS32960;Dbxref=GenBank:WP_059529350.1;Name=WP_059529350.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478509.1;locus_tag=LDO45_RS32960;product=NfeD family protein;protein_id=WP_059529350.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 24035 24970 . + . ID=gene-LDO45_RS32965;Name=LDO45_RS32965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32965;old_locus_tag=BDI4_90024 NZ_CAJZAS010000249.1 Protein Homology CDS 24035 24970 . + 0 ID=cds-WP_223965350.1;Parent=gene-LDO45_RS32965;Dbxref=GenBank:WP_223965350.1;Name=WP_223965350.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758549.1;locus_tag=LDO45_RS32965;product=SPFH domain-containing protein;protein_id=WP_223965350.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 25196 25642 . - . ID=gene-LDO45_RS32970;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=LDO45_RS32970;old_locus_tag=BDI4_90025 NZ_CAJZAS010000249.1 Protein Homology CDS 25196 25642 . - 0 ID=cds-WP_050012888.1;Parent=gene-LDO45_RS32970;Dbxref=GenBank:WP_050012888.1;Name=WP_050012888.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004193190.1;locus_tag=LDO45_RS32970;product=SsrA-binding protein SmpB;protein_id=WP_050012888.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 25741 26178 . + . ID=gene-LDO45_RS32975;Name=LDO45_RS32975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32975;old_locus_tag=BDI4_90026 NZ_CAJZAS010000249.1 Protein Homology CDS 25741 26178 . + 0 ID=cds-WP_059529356.1;Parent=gene-LDO45_RS32975;Dbxref=GenBank:WP_059529356.1;Name=WP_059529356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009904866.1;locus_tag=LDO45_RS32975;product=type II toxin-antitoxin system RatA family toxin;protein_id=WP_059529356.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 26183 26506 . + . ID=gene-LDO45_RS32980;Name=LDO45_RS32980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32980;old_locus_tag=BDI4_90027 NZ_CAJZAS010000249.1 Protein Homology CDS 26183 26506 . + 0 ID=cds-WP_059450006.1;Parent=gene-LDO45_RS32980;Dbxref=GenBank:WP_059450006.1;Name=WP_059450006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006764044.1;locus_tag=LDO45_RS32980;product=RnfH family protein;protein_id=WP_059450006.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 26571 27554 . - . ID=gene-LDO45_RS32985;Name=LDO45_RS32985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32985;old_locus_tag=BDI4_90028 NZ_CAJZAS010000249.1 Protein Homology CDS 26571 27554 . - 0 ID=cds-WP_223965351.1;Parent=gene-LDO45_RS32985;Dbxref=GenBank:WP_223965351.1;Name=WP_223965351.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549553.1;locus_tag=LDO45_RS32985;product=DMT family transporter;protein_id=WP_223965351.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq gene 27736 28419 . - . ID=gene-LDO45_RS32990;Name=LDO45_RS32990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS32990;old_locus_tag=BDI4_90029 NZ_CAJZAS010000249.1 Protein Homology CDS 27736 28419 . - 0 ID=cds-WP_223965352.1;Parent=gene-LDO45_RS32990;Dbxref=GenBank:WP_223965352.1;Name=WP_223965352.1;Ontology_term=GO:0017186,GO:0016603;gbkey=CDS;go_function=glutaminyl-peptide cyclotransferase activity|0016603||IEA;go_process=peptidyl-pyroglutamic acid biosynthetic process%2C using glutaminyl-peptide cyclotransferase|0017186||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896755.1;locus_tag=LDO45_RS32990;product=glutaminyl-peptide cyclotransferase;protein_id=WP_223965352.1;transl_table=11 NZ_CAJZAS010000249.1 RefSeq pseudogene 28450 28662 . - . ID=gene-LDO45_RS32995;Name=LDO45_RS32995;end_range=28662,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS32995;old_locus_tag=BDI4_90030;partial=true;pseudo=true NZ_CAJZAS010000249.1 Protein Homology CDS 28450 28662 . - 0 ID=cds-LDO45_RS32995;Parent=gene-LDO45_RS32995;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=28662,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495565.1;locus_tag=LDO45_RS32995;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000250.1 1 18531 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000250.1 RefSeq region 1 18531 . + . ID=NZ_CAJZAS010000250.1:1..18531;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_90 NZ_CAJZAS010000250.1 RefSeq gene 117 518 . + . ID=gene-LDO45_RS33000;Name=LDO45_RS33000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33000;old_locus_tag=BDI4_900001 NZ_CAJZAS010000250.1 Protein Homology CDS 117 518 . + 0 ID=cds-WP_223965354.1;Parent=gene-LDO45_RS33000;Dbxref=GenBank:WP_223965354.1;Name=WP_223965354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010120266.1;locus_tag=LDO45_RS33000;product=hypothetical protein;protein_id=WP_223965354.1;transl_table=11 NZ_CAJZAS010000250.1 RefSeq gene 524 952 . + . ID=gene-LDO45_RS33005;Name=LDO45_RS33005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33005;old_locus_tag=BDI4_900002 NZ_CAJZAS010000250.1 GeneMarkS-2+ CDS 524 952 . + 0 ID=cds-WP_223965355.1;Parent=gene-LDO45_RS33005;Dbxref=GenBank:WP_223965355.1;Name=WP_223965355.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS33005;product=hypothetical protein;protein_id=WP_223965355.1;transl_table=11 NZ_CAJZAS010000250.1 RefSeq gene 986 1711 . - . ID=gene-LDO45_RS33010;Name=LDO45_RS33010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33010;old_locus_tag=BDI4_900003 NZ_CAJZAS010000250.1 Protein Homology CDS 986 1711 . - 0 ID=cds-WP_059523942.1;Parent=gene-LDO45_RS33010;Dbxref=GenBank:WP_059523942.1;Name=WP_059523942.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546341.1;locus_tag=LDO45_RS33010;product=copper homeostasis protein CutC;protein_id=WP_059523942.1;transl_table=11 NZ_CAJZAS010000250.1 RefSeq gene 1788 3074 . - . ID=gene-LDO45_RS33015;Name=LDO45_RS33015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33015;old_locus_tag=BDI4_900004 NZ_CAJZAS010000250.1 Protein Homology CDS 1788 3074 . - 0 ID=cds-WP_059819864.1;Parent=gene-LDO45_RS33015;Dbxref=GenBank:WP_059819864.1;Name=WP_059819864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895877.1;locus_tag=LDO45_RS33015;product=EAL domain-containing protein;protein_id=WP_059819864.1;transl_table=11 NZ_CAJZAS010000250.1 RefSeq gene 3366 5033 . + . ID=gene-LDO45_RS33020;Name=LDO45_RS33020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33020;old_locus_tag=BDI4_900005 NZ_CAJZAS010000250.1 Protein Homology CDS 3366 5033 . + 0 ID=cds-WP_059703255.1;Parent=gene-LDO45_RS33020;Dbxref=GenBank:WP_059703255.1;Name=WP_059703255.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414312.1;locus_tag=LDO45_RS33020;product=Na+/H+ antiporter;protein_id=WP_059703255.1;transl_table=11 NZ_CAJZAS010000250.1 RefSeq gene 5124 8696 . - . ID=gene-LDO45_RS33025;Name=LDO45_RS33025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33025;old_locus_tag=BDI4_900006 NZ_CAJZAS010000250.1 Protein Homology CDS 5124 8696 . - 0 ID=cds-WP_223965356.1;Parent=gene-LDO45_RS33025;Dbxref=GenBank:WP_223965356.1;Name=WP_223965356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353392.1;locus_tag=LDO45_RS33025;product=indolepyruvate ferredoxin oxidoreductase family protein;protein_id=WP_223965356.1;transl_table=11 NZ_CAJZAS010000250.1 RefSeq gene 10676 11233 . - . ID=gene-LDO45_RS33030;Name=LDO45_RS33030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33030;old_locus_tag=BDI4_900011 NZ_CAJZAS010000250.1 Protein Homology CDS 10676 11233 . - 0 ID=cds-WP_223965357.1;Parent=gene-LDO45_RS33030;Dbxref=GenBank:WP_223965357.1;Name=WP_223965357.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895873.1;locus_tag=LDO45_RS33030;product=sugar O-acetyltransferase;protein_id=WP_223965357.1;transl_table=11 NZ_CAJZAS010000250.1 RefSeq gene 11616 12230 . + . ID=gene-LDO45_RS33035;Name=LDO45_RS33035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33035;old_locus_tag=BDI4_900013 NZ_CAJZAS010000250.1 Protein Homology CDS 11616 12230 . + 0 ID=cds-WP_059691394.1;Parent=gene-LDO45_RS33035;Dbxref=GenBank:WP_059691394.1;Name=WP_059691394.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484065.1;locus_tag=LDO45_RS33035;product=glutathione S-transferase family protein;protein_id=WP_059691394.1;transl_table=11 NZ_CAJZAS010000250.1 RefSeq gene 12305 13273 . - . ID=gene-LDO45_RS33040;Name=LDO45_RS33040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33040;old_locus_tag=BDI4_900014 NZ_CAJZAS010000250.1 Protein Homology CDS 12305 13273 . - 0 ID=cds-WP_223965358.1;Parent=gene-LDO45_RS33040;Dbxref=GenBank:WP_223965358.1;Name=WP_223965358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760584.1;locus_tag=LDO45_RS33040;product=ion channel;protein_id=WP_223965358.1;transl_table=11 NZ_CAJZAS010000250.1 RefSeq gene 13430 14449 . - . ID=gene-LDO45_RS33045;Name=LDO45_RS33045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33045;old_locus_tag=BDI4_900015 NZ_CAJZAS010000250.1 Protein Homology CDS 13430 14449 . - 0 ID=cds-WP_059523927.1;Parent=gene-LDO45_RS33045;Dbxref=GenBank:WP_059523927.1;Name=WP_059523927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004541145.1;locus_tag=LDO45_RS33045;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_059523927.1;transl_table=11 NZ_CAJZAS010000250.1 RefSeq gene 14902 15795 . + . ID=gene-LDO45_RS33050;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=LDO45_RS33050;old_locus_tag=BDI4_900017 NZ_CAJZAS010000250.1 Protein Homology CDS 14902 15795 . + 0 ID=cds-WP_223965359.1;Parent=gene-LDO45_RS33050;Dbxref=GenBank:WP_223965359.1;Name=WP_223965359.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012214255.1;locus_tag=LDO45_RS33050;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_223965359.1;transl_table=11 NZ_CAJZAS010000250.1 RefSeq gene 15849 16229 . - . ID=gene-LDO45_RS33055;Name=LDO45_RS33055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33055;old_locus_tag=BDI4_900018 NZ_CAJZAS010000250.1 Protein Homology CDS 15849 16229 . - 0 ID=cds-WP_059523923.1;Parent=gene-LDO45_RS33055;Dbxref=GenBank:WP_059523923.1;Name=WP_059523923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006484069.1;locus_tag=LDO45_RS33055;product=type II toxin-antitoxin system VapC family toxin;protein_id=WP_059523923.1;transl_table=11 NZ_CAJZAS010000250.1 RefSeq gene 16229 16438 . - . ID=gene-LDO45_RS33060;Name=LDO45_RS33060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33060;old_locus_tag=BDI4_900019 NZ_CAJZAS010000250.1 Protein Homology CDS 16229 16438 . - 0 ID=cds-WP_059691391.1;Parent=gene-LDO45_RS33060;Dbxref=GenBank:WP_059691391.1;Name=WP_059691391.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006760579.1;locus_tag=LDO45_RS33060;product=hypothetical protein;protein_id=WP_059691391.1;transl_table=11 NZ_CAJZAS010000250.1 RefSeq gene 16543 17589 . - . ID=gene-LDO45_RS33065;Name=LDO45_RS33065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33065;old_locus_tag=BDI4_900020 NZ_CAJZAS010000250.1 Protein Homology CDS 16543 17589 . - 0 ID=cds-WP_223965360.1;Parent=gene-LDO45_RS33065;Dbxref=GenBank:WP_223965360.1;Name=WP_223965360.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658080.1;locus_tag=LDO45_RS33065;product=LysR substrate-binding domain-containing protein;protein_id=WP_223965360.1;transl_table=11 NZ_CAJZAS010000250.1 RefSeq gene 17698 18531 . + . ID=gene-LDO45_RS33070;Name=LDO45_RS33070;end_range=18531,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33070;partial=true NZ_CAJZAS010000250.1 Protein Homology CDS 17698 18531 . + 0 ID=cds-WP_223965361.1;Parent=gene-LDO45_RS33070;Dbxref=GenBank:WP_223965361.1;Name=WP_223965361.1;Ontology_term=GO:0055085,GO:0022857;end_range=18531,.;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012329342.1;locus_tag=LDO45_RS33070;partial=true;product=MFS transporter;protein_id=WP_223965361.1;transl_table=11 ##sequence-region NZ_CAJZAS010000251.1 1 68517 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000251.1 RefSeq region 1 68517 . + . ID=NZ_CAJZAS010000251.1:1..68517;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_91 NZ_CAJZAS010000251.1 RefSeq gene 427 1086 . - . ID=gene-LDO45_RS33075;Name=LDO45_RS33075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33075;old_locus_tag=BDI4_910001 NZ_CAJZAS010000251.1 Protein Homology CDS 427 1086 . - 0 ID=cds-WP_059528646.1;Parent=gene-LDO45_RS33075;Dbxref=GenBank:WP_059528646.1;Name=WP_059528646.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367004.1;locus_tag=LDO45_RS33075;product=isoprenylcysteine carboxylmethyltransferase family protein;protein_id=WP_059528646.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 1254 1418 . - . ID=gene-LDO45_RS33080;Name=LDO45_RS33080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33080;old_locus_tag=BDI4_910002 NZ_CAJZAS010000251.1 Protein Homology CDS 1254 1418 . - 0 ID=cds-WP_175908542.1;Parent=gene-LDO45_RS33080;Dbxref=GenBank:WP_175908542.1;Name=WP_175908542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755831.1;locus_tag=LDO45_RS33080;product=hypothetical protein;protein_id=WP_175908542.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 1680 2099 . - . ID=gene-LDO45_RS33085;Name=LDO45_RS33085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33085;old_locus_tag=BDI4_910003 NZ_CAJZAS010000251.1 Protein Homology CDS 1680 2099 . - 0 ID=cds-WP_059689320.1;Parent=gene-LDO45_RS33085;Dbxref=GenBank:WP_059689320.1;Name=WP_059689320.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006485763.1;locus_tag=LDO45_RS33085;product=HIT family protein;protein_id=WP_059689320.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 2387 3553 . + . ID=gene-LDO45_RS33090;Name=LDO45_RS33090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33090;old_locus_tag=BDI4_910004 NZ_CAJZAS010000251.1 Protein Homology CDS 2387 3553 . + 0 ID=cds-WP_223965362.1;Parent=gene-LDO45_RS33090;Dbxref=GenBank:WP_223965362.1;Name=WP_223965362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011353819.1;locus_tag=LDO45_RS33090;product=hypothetical protein;protein_id=WP_223965362.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 3747 5150 . + . ID=gene-LDO45_RS33095;Name=LDO45_RS33095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33095;old_locus_tag=BDI4_910005 NZ_CAJZAS010000251.1 Protein Homology CDS 3747 5150 . + 0 ID=cds-WP_223965363.1;Parent=gene-LDO45_RS33095;Dbxref=GenBank:WP_223965363.1;Name=WP_223965363.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548974.1;locus_tag=LDO45_RS33095;product=serine hydrolase;protein_id=WP_223965363.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 5217 5840 . - . ID=gene-LDO45_RS33100;Name=LDO45_RS33100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33100;old_locus_tag=BDI4_910006 NZ_CAJZAS010000251.1 Protein Homology CDS 5217 5840 . - 0 ID=cds-WP_059528655.1;Parent=gene-LDO45_RS33100;Dbxref=GenBank:WP_059528655.1;Name=WP_059528655.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010117595.1;locus_tag=LDO45_RS33100;product=glutathione S-transferase family protein;protein_id=WP_059528655.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 5964 6434 . - . ID=gene-LDO45_RS33105;Name=LDO45_RS33105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33105;old_locus_tag=BDI4_910007 NZ_CAJZAS010000251.1 Protein Homology CDS 5964 6434 . - 0 ID=cds-WP_059528664.1;Parent=gene-LDO45_RS33105;Dbxref=GenBank:WP_059528664.1;Name=WP_059528664.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480374.1;locus_tag=LDO45_RS33105;product=DUF2269 domain-containing protein;protein_id=WP_059528664.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq pseudogene 6431 7613 . - . ID=gene-LDO45_RS33110;Name=LDO45_RS33110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS33110;pseudo=true NZ_CAJZAS010000251.1 Protein Homology CDS 6431 7613 . - 0 ID=cds-LDO45_RS33110;Parent=gene-LDO45_RS33110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496205.1;locus_tag=LDO45_RS33110;product=SDR family oxidoreductase;pseudo=true;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 7757 8290 . - . ID=gene-LDO45_RS33115;Name=LDO45_RS33115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33115;old_locus_tag=BDI4_910009 NZ_CAJZAS010000251.1 Protein Homology CDS 7757 8290 . - 0 ID=cds-WP_047902276.1;Parent=gene-LDO45_RS33115;Dbxref=GenBank:WP_047902276.1;Name=WP_047902276.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900884.1;locus_tag=LDO45_RS33115;product=GbsR/MarR family transcriptional regulator;protein_id=WP_047902276.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 8496 9698 . + . ID=gene-LDO45_RS33120;Name=fabV;gbkey=Gene;gene=fabV;gene_biotype=protein_coding;locus_tag=LDO45_RS33120;old_locus_tag=BDI4_910010 NZ_CAJZAS010000251.1 Protein Homology CDS 8496 9698 . + 0 ID=cds-WP_059689316.1;Parent=gene-LDO45_RS33120;Dbxref=GenBank:WP_059689316.1;Name=WP_059689316.1;Ontology_term=GO:0006633,GO:0004318;gbkey=CDS;gene=fabV;go_function=enoyl-[acyl-carrier-protein] reductase (NADH) activity|0004318||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750628.1;locus_tag=LDO45_RS33120;product=enoyl-ACP reductase FabV;protein_id=WP_059689316.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 9833 10411 . - . ID=gene-LDO45_RS33125;Name=LDO45_RS33125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33125;old_locus_tag=BDI4_910011 NZ_CAJZAS010000251.1 Protein Homology CDS 9833 10411 . - 0 ID=cds-WP_223965364.1;Parent=gene-LDO45_RS33125;Dbxref=GenBank:WP_223965364.1;Name=WP_223965364.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750631.1;locus_tag=LDO45_RS33125;product=hypothetical protein;protein_id=WP_223965364.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 10583 11113 . - . ID=gene-LDO45_RS33130;Name=LDO45_RS33130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33130;old_locus_tag=BDI4_910012 NZ_CAJZAS010000251.1 Protein Homology CDS 10583 11113 . - 0 ID=cds-WP_223965365.1;Parent=gene-LDO45_RS33130;Dbxref=GenBank:WP_223965365.1;Name=WP_223965365.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339282.1;locus_tag=LDO45_RS33130;product=GNAT family N-acetyltransferase;protein_id=WP_223965365.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 11314 11691 . + . ID=gene-LDO45_RS33135;Name=LDO45_RS33135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33135;old_locus_tag=BDI4_910013 NZ_CAJZAS010000251.1 Protein Homology CDS 11314 11691 . + 0 ID=cds-WP_223965399.1;Parent=gene-LDO45_RS33135;Dbxref=GenBank:WP_223965399.1;Name=WP_223965399.1;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758447.1;locus_tag=LDO45_RS33135;product=helix-turn-helix transcriptional regulator;protein_id=WP_223965399.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 11654 12139 . + . ID=gene-LDO45_RS33140;Name=LDO45_RS33140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33140;old_locus_tag=BDI4_910014 NZ_CAJZAS010000251.1 Protein Homology CDS 11654 12139 . + 0 ID=cds-WP_059528676.1;Parent=gene-LDO45_RS33140;Dbxref=GenBank:WP_059528676.1;Name=WP_059528676.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548961.1;locus_tag=LDO45_RS33140;product=SRPBCC family protein;protein_id=WP_059528676.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 12260 12736 . + . ID=gene-LDO45_RS33145;Name=LDO45_RS33145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33145;old_locus_tag=BDI4_910015 NZ_CAJZAS010000251.1 Protein Homology CDS 12260 12736 . + 0 ID=cds-WP_059689312.1;Parent=gene-LDO45_RS33145;Dbxref=GenBank:WP_059689312.1;Name=WP_059689312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900875.1;locus_tag=LDO45_RS33145;product=SRPBCC family protein;protein_id=WP_059689312.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 12761 13885 . - . ID=gene-LDO45_RS33150;Name=LDO45_RS33150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33150;old_locus_tag=BDI4_910016 NZ_CAJZAS010000251.1 Protein Homology CDS 12761 13885 . - 0 ID=cds-WP_223965366.1;Parent=gene-LDO45_RS33150;Dbxref=GenBank:WP_223965366.1;Name=WP_223965366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496195.1;locus_tag=LDO45_RS33150;product=amidohydrolase;protein_id=WP_223965366.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 13887 15194 . - . ID=gene-LDO45_RS33155;Name=LDO45_RS33155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33155;old_locus_tag=BDI4_910017 NZ_CAJZAS010000251.1 Protein Homology CDS 13887 15194 . - 0 ID=cds-WP_059528679.1;Parent=gene-LDO45_RS33155;Dbxref=GenBank:WP_059528679.1;Name=WP_059528679.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339278.1;locus_tag=LDO45_RS33155;product=MFS transporter;protein_id=WP_059528679.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 15272 16567 . - . ID=gene-LDO45_RS33160;Name=LDO45_RS33160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33160;old_locus_tag=BDI4_910018 NZ_CAJZAS010000251.1 Protein Homology CDS 15272 16567 . - 0 ID=cds-WP_223965367.1;Parent=gene-LDO45_RS33160;Dbxref=GenBank:WP_223965367.1;Name=WP_223965367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017335764.1;locus_tag=LDO45_RS33160;product=CaiB/BaiF CoA-transferase family protein;protein_id=WP_223965367.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 16564 17550 . - . ID=gene-LDO45_RS33165;Name=LDO45_RS33165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33165;old_locus_tag=BDI4_910019 NZ_CAJZAS010000251.1 Protein Homology CDS 16564 17550 . - 0 ID=cds-WP_059528683.1;Parent=gene-LDO45_RS33165;Dbxref=GenBank:WP_059528683.1;Name=WP_059528683.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367017.1;locus_tag=LDO45_RS33165;product=hydroxymethylglutaryl-CoA lyase;protein_id=WP_059528683.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 17764 18543 . + . ID=gene-LDO45_RS33170;Name=LDO45_RS33170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33170;old_locus_tag=BDI4_910020 NZ_CAJZAS010000251.1 Protein Homology CDS 17764 18543 . + 0 ID=cds-WP_223965400.1;Parent=gene-LDO45_RS33170;Dbxref=GenBank:WP_223965400.1;Name=WP_223965400.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367018.1;locus_tag=LDO45_RS33170;product=IclR family transcriptional regulator;protein_id=WP_223965400.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 18677 19315 . + . ID=gene-LDO45_RS33175;Name=LDO45_RS33175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33175;old_locus_tag=BDI4_910021 NZ_CAJZAS010000251.1 Protein Homology CDS 18677 19315 . + 0 ID=cds-WP_223965368.1;Parent=gene-LDO45_RS33175;Dbxref=GenBank:WP_223965368.1;Name=WP_223965368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367019.1;locus_tag=LDO45_RS33175;product=2-hydroxychromene-2-carboxylate isomerase;protein_id=WP_223965368.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 19823 20518 . + . ID=gene-LDO45_RS33180;Name=LDO45_RS33180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33180;old_locus_tag=BDI4_910022 NZ_CAJZAS010000251.1 Protein Homology CDS 19823 20518 . + 0 ID=cds-WP_223965369.1;Parent=gene-LDO45_RS33180;Dbxref=GenBank:WP_223965369.1;Name=WP_223965369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750643.1;locus_tag=LDO45_RS33180;product=phosphatase PAP2 family protein;protein_id=WP_223965369.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 20654 21313 . - . ID=gene-LDO45_RS33185;Name=LDO45_RS33185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33185;old_locus_tag=BDI4_910023 NZ_CAJZAS010000251.1 Protein Homology CDS 20654 21313 . - 0 ID=cds-WP_223965370.1;Parent=gene-LDO45_RS33185;Dbxref=GenBank:WP_223965370.1;Name=WP_223965370.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548950.1;locus_tag=LDO45_RS33185;product=glutathione S-transferase family protein;protein_id=WP_223965370.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 21443 22513 . - . ID=gene-LDO45_RS33190;Name=LDO45_RS33190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33190;old_locus_tag=BDI4_910025 NZ_CAJZAS010000251.1 Protein Homology CDS 21443 22513 . - 0 ID=cds-WP_059528695.1;Parent=gene-LDO45_RS33190;Dbxref=GenBank:WP_059528695.1;Name=WP_059528695.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367024.1;locus_tag=LDO45_RS33190;product=MBL fold metallo-hydrolase;protein_id=WP_059528695.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 22736 23641 . + . ID=gene-LDO45_RS33195;Name=LDO45_RS33195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33195;old_locus_tag=BDI4_910024 NZ_CAJZAS010000251.1 Protein Homology CDS 22736 23641 . + 0 ID=cds-WP_059528697.1;Parent=gene-LDO45_RS33195;Dbxref=GenBank:WP_059528697.1;Name=WP_059528697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750650.1;locus_tag=LDO45_RS33195;product=HTH-type transcriptional regulator ArgP;protein_id=WP_059528697.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 23803 24015 . + . ID=gene-LDO45_RS33200;Name=LDO45_RS33200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33200;old_locus_tag=BDI4_910026 NZ_CAJZAS010000251.1 Protein Homology CDS 23803 24015 . + 0 ID=cds-WP_059528699.1;Parent=gene-LDO45_RS33200;Dbxref=GenBank:WP_059528699.1;Name=WP_059528699.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758457.1;locus_tag=LDO45_RS33200;product=DUF1059 domain-containing protein;protein_id=WP_059528699.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 24123 25136 . - . ID=gene-LDO45_RS33205;Name=ltaE;gbkey=Gene;gene=ltaE;gene_biotype=protein_coding;locus_tag=LDO45_RS33205;old_locus_tag=BDI4_910027 NZ_CAJZAS010000251.1 Protein Homology CDS 24123 25136 . - 0 ID=cds-WP_223965371.1;Parent=gene-LDO45_RS33205;Dbxref=GenBank:WP_223965371.1;Name=WP_223965371.1;Ontology_term=GO:0006520,GO:0016829;gbkey=CDS;gene=ltaE;go_function=lyase activity|0016829||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339268.1;locus_tag=LDO45_RS33205;product=low-specificity L-threonine aldolase;protein_id=WP_223965371.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 25550 26971 . + . ID=gene-LDO45_RS33210;Name=LDO45_RS33210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33210;old_locus_tag=BDI4_910028 NZ_CAJZAS010000251.1 Protein Homology CDS 25550 26971 . + 0 ID=cds-WP_059689301.1;Parent=gene-LDO45_RS33210;Dbxref=GenBank:WP_059689301.1;Name=WP_059689301.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014900865.1;locus_tag=LDO45_RS33210;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_059689301.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 27002 28009 . + . ID=gene-LDO45_RS33215;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=LDO45_RS33215;old_locus_tag=BDI4_910029 NZ_CAJZAS010000251.1 Protein Homology CDS 27002 28009 . + 0 ID=cds-WP_059528706.1;Parent=gene-LDO45_RS33215;Dbxref=GenBank:WP_059528706.1;Name=WP_059528706.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548943.1;locus_tag=LDO45_RS33215;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_059528706.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 27981 28160 . + . ID=gene-LDO45_RS33220;Name=LDO45_RS33220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33220;old_locus_tag=BDI4_910030 NZ_CAJZAS010000251.1 Protein Homology CDS 27981 28160 . + 0 ID=cds-WP_059598950.1;Parent=gene-LDO45_RS33220;Dbxref=GenBank:WP_059598950.1;Name=WP_059598950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012493604.1;locus_tag=LDO45_RS33220;product=hypothetical protein;protein_id=WP_059598950.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 28201 28488 . - . ID=gene-LDO45_RS33225;Name=LDO45_RS33225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33225;old_locus_tag=BDI4_910031 NZ_CAJZAS010000251.1 Protein Homology CDS 28201 28488 . - 0 ID=cds-WP_044848495.1;Parent=gene-LDO45_RS33225;Dbxref=GenBank:WP_044848495.1;Name=WP_044848495.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659767.1;locus_tag=LDO45_RS33225;product=helix-turn-helix domain-containing protein;protein_id=WP_044848495.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 28503 29819 . - . ID=gene-LDO45_RS33230;Name=LDO45_RS33230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33230;old_locus_tag=BDI4_910032 NZ_CAJZAS010000251.1 Protein Homology CDS 28503 29819 . - 0 ID=cds-WP_223965372.1;Parent=gene-LDO45_RS33230;Dbxref=GenBank:WP_223965372.1;Name=WP_223965372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548941.1;locus_tag=LDO45_RS33230;product=type II toxin-antitoxin system HipA family toxin;protein_id=WP_223965372.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 29940 30134 . - . ID=gene-LDO45_RS33235;Name=LDO45_RS33235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33235;old_locus_tag=BDI4_910033 NZ_CAJZAS010000251.1 Protein Homology CDS 29940 30134 . - 0 ID=cds-WP_059528716.1;Parent=gene-LDO45_RS33235;Dbxref=GenBank:WP_059528716.1;Name=WP_059528716.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006480346.1;locus_tag=LDO45_RS33235;product=YqaE/Pmp3 family membrane protein;protein_id=WP_059528716.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 30212 30667 . - . ID=gene-LDO45_RS33240;Name=LDO45_RS33240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33240;old_locus_tag=BDI4_910034 NZ_CAJZAS010000251.1 Protein Homology CDS 30212 30667 . - 0 ID=cds-WP_156437022.1;Parent=gene-LDO45_RS33240;Dbxref=GenBank:WP_156437022.1;Name=WP_156437022.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013689107.1;locus_tag=LDO45_RS33240;product=TIGR00725 family protein;protein_id=WP_156437022.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 30738 31553 . - . ID=gene-LDO45_RS33245;Name=LDO45_RS33245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33245;old_locus_tag=BDI4_910035 NZ_CAJZAS010000251.1 Protein Homology CDS 30738 31553 . - 0 ID=cds-WP_223965374.1;Parent=gene-LDO45_RS33245;Dbxref=GenBank:WP_223965374.1;Name=WP_223965374.1;Ontology_term=GO:0055085,GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0005886,GO:0055052;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331071.1;locus_tag=LDO45_RS33245;product=ABC transporter permease;protein_id=WP_223965374.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 31579 32667 . - . ID=gene-LDO45_RS33250;Name=LDO45_RS33250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33250;old_locus_tag=BDI4_910036 NZ_CAJZAS010000251.1 Protein Homology CDS 31579 32667 . - 0 ID=cds-WP_059528723.1;Parent=gene-LDO45_RS33250;Dbxref=GenBank:WP_059528723.1;Name=WP_059528723.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006029050.1;locus_tag=LDO45_RS33250;product=extracellular solute-binding protein;protein_id=WP_059528723.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 32703 33734 . - . ID=gene-LDO45_RS33255;Name=LDO45_RS33255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33255;old_locus_tag=BDI4_910037 NZ_CAJZAS010000251.1 Protein Homology CDS 32703 33734 . - 0 ID=cds-WP_223965375.1;Parent=gene-LDO45_RS33255;Dbxref=GenBank:WP_223965375.1;Name=WP_223965375.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010097450.1;locus_tag=LDO45_RS33255;product=ABC transporter ATP-binding protein;protein_id=WP_223965375.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 33742 34593 . - . ID=gene-LDO45_RS33260;Name=LDO45_RS33260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33260;old_locus_tag=BDI4_910038 NZ_CAJZAS010000251.1 Protein Homology CDS 33742 34593 . - 0 ID=cds-WP_223965376.1;Parent=gene-LDO45_RS33260;Dbxref=GenBank:WP_223965376.1;Name=WP_223965376.1;Ontology_term=GO:0055085,GO:0005524,GO:0016887,GO:0042626,GO:0140359,GO:0005886,GO:0055052;gbkey=CDS;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014724147.1;locus_tag=LDO45_RS33260;product=ABC transporter permease;protein_id=WP_223965376.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 34756 35652 . + . ID=gene-LDO45_RS33265;Name=LDO45_RS33265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33265;old_locus_tag=BDI4_910039 NZ_CAJZAS010000251.1 Protein Homology CDS 34756 35652 . + 0 ID=cds-WP_059698070.1;Parent=gene-LDO45_RS33265;Dbxref=GenBank:WP_059698070.1;Name=WP_059698070.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010097447.1;locus_tag=LDO45_RS33265;product=LysR substrate-binding domain-containing protein;protein_id=WP_059698070.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 35715 37391 . - . ID=gene-LDO45_RS33270;Name=LDO45_RS33270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33270;old_locus_tag=BDI4_910040 NZ_CAJZAS010000251.1 Protein Homology CDS 35715 37391 . - 0 ID=cds-WP_059689294.1;Parent=gene-LDO45_RS33270;Dbxref=GenBank:WP_059689294.1;Name=WP_059689294.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011881007.1;locus_tag=LDO45_RS33270;product=alkaline phosphatase family protein;protein_id=WP_059689294.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 37683 37904 . + . ID=gene-LDO45_RS33275;Name=LDO45_RS33275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33275;old_locus_tag=BDI4_910041 NZ_CAJZAS010000251.1 Protein Homology CDS 37683 37904 . + 0 ID=cds-WP_059448952.1;Parent=gene-LDO45_RS33275;Dbxref=GenBank:WP_059448952.1;Name=WP_059448952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659770.1;locus_tag=LDO45_RS33275;product=hypothetical protein;protein_id=WP_059448952.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 37974 41777 . - . ID=gene-LDO45_RS33280;Name=LDO45_RS33280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33280;old_locus_tag=BDI4_910042 NZ_CAJZAS010000251.1 Protein Homology CDS 37974 41777 . - 0 ID=cds-WP_223965377.1;Parent=gene-LDO45_RS33280;Dbxref=GenBank:WP_223965377.1;Name=WP_223965377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548932.1;locus_tag=LDO45_RS33280;product=DUF748 domain-containing protein;protein_id=WP_223965377.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 41931 43370 . - . ID=gene-LDO45_RS33285;Name=LDO45_RS33285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33285;old_locus_tag=BDI4_910043 NZ_CAJZAS010000251.1 Protein Homology CDS 41931 43370 . - 0 ID=cds-WP_223965378.1;Parent=gene-LDO45_RS33285;Dbxref=GenBank:WP_223965378.1;Name=WP_223965378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004538828.1;locus_tag=LDO45_RS33285;product=DUF1254 domain-containing protein;protein_id=WP_223965378.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 43740 46538 . + . ID=gene-LDO45_RS33290;Name=LDO45_RS33290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33290;old_locus_tag=BDI4_910044 NZ_CAJZAS010000251.1 Protein Homology CDS 43740 46538 . + 0 ID=cds-WP_223965379.1;Parent=gene-LDO45_RS33290;Dbxref=GenBank:WP_223965379.1;Name=WP_223965379.1;Ontology_term=GO:0006812,GO:0042625,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled ion transmembrane transporter activity|0042625||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659773.1;locus_tag=LDO45_RS33290;product=heavy metal translocating P-type ATPase;protein_id=WP_223965379.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 46709 47188 . - . ID=gene-LDO45_RS33295;Name=LDO45_RS33295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33295;old_locus_tag=BDI4_910045 NZ_CAJZAS010000251.1 Protein Homology CDS 46709 47188 . - 0 ID=cds-WP_059528743.1;Parent=gene-LDO45_RS33295;Dbxref=GenBank:WP_059528743.1;Name=WP_059528743.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367039.1;locus_tag=LDO45_RS33295;product=N-acetyltransferase;protein_id=WP_059528743.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 47340 47495 . - . ID=gene-LDO45_RS33300;Name=LDO45_RS33300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33300;old_locus_tag=BDI4_910046 NZ_CAJZAS010000251.1 Protein Homology CDS 47340 47495 . - 0 ID=cds-WP_175908567.1;Parent=gene-LDO45_RS33300;Dbxref=GenBank:WP_175908567.1;Name=WP_175908567.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187391.1;locus_tag=LDO45_RS33300;product=hypothetical protein;protein_id=WP_175908567.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 47671 49035 . - . ID=gene-LDO45_RS33305;Name=LDO45_RS33305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33305;old_locus_tag=BDI4_910047 NZ_CAJZAS010000251.1 Protein Homology CDS 47671 49035 . - 0 ID=cds-WP_223965380.1;Parent=gene-LDO45_RS33305;Dbxref=GenBank:WP_223965380.1;Name=WP_223965380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011659776.1;locus_tag=LDO45_RS33305;product=flagellar hook-length control protein FliK;protein_id=WP_223965380.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 49140 49838 . - . ID=gene-LDO45_RS33310;Name=LDO45_RS33310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33310;old_locus_tag=BDI4_910048 NZ_CAJZAS010000251.1 Protein Homology CDS 49140 49838 . - 0 ID=cds-WP_223965381.1;Parent=gene-LDO45_RS33310;Dbxref=GenBank:WP_223965381.1;Name=WP_223965381.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017331058.1;locus_tag=LDO45_RS33310;product=MgtC/SapB family protein;protein_id=WP_223965381.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 49948 51057 . + . ID=gene-LDO45_RS33315;Name=LDO45_RS33315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33315;old_locus_tag=BDI4_910049 NZ_CAJZAS010000251.1 Protein Homology CDS 49948 51057 . + 0 ID=cds-WP_223965382.1;Parent=gene-LDO45_RS33315;Dbxref=GenBank:WP_223965382.1;Name=WP_223965382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752779.1;locus_tag=LDO45_RS33315;product=AGE family epimerase/isomerase;protein_id=WP_223965382.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq pseudogene 51030 51563 . - . ID=gene-LDO45_RS33320;Name=LDO45_RS33320;end_range=51563,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS33320;old_locus_tag=BDI4_910050;partial=true;pseudo=true NZ_CAJZAS010000251.1 Protein Homology CDS 51030 51563 . - 0 ID=cds-LDO45_RS33320;Parent=gene-LDO45_RS33320;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0007165,GO:0016020;end_range=51563,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011548924.1;locus_tag=LDO45_RS33320;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 51721 52953 . + . ID=gene-LDO45_RS33325;Name=LDO45_RS33325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33325;old_locus_tag=BDI4_910051 NZ_CAJZAS010000251.1 Protein Homology CDS 51721 52953 . + 0 ID=cds-WP_223965383.1;Parent=gene-LDO45_RS33325;Dbxref=GenBank:WP_223965383.1;Name=WP_223965383.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.5;locus_tag=LDO45_RS33325;product=site-specific integrase;protein_id=WP_223965383.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 52979 53206 . - . ID=gene-LDO45_RS33330;Name=LDO45_RS33330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33330;old_locus_tag=BDI4_910052 NZ_CAJZAS010000251.1 GeneMarkS-2+ CDS 52979 53206 . - 0 ID=cds-WP_223965384.1;Parent=gene-LDO45_RS33330;Dbxref=GenBank:WP_223965384.1;Name=WP_223965384.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS33330;product=AlpA family transcriptional regulator;protein_id=WP_223965384.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 53226 53471 . - . ID=gene-LDO45_RS33335;Name=LDO45_RS33335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33335;old_locus_tag=BDI4_910053 NZ_CAJZAS010000251.1 GeneMarkS-2+ CDS 53226 53471 . - 0 ID=cds-WP_223965385.1;Parent=gene-LDO45_RS33335;Dbxref=GenBank:WP_223965385.1;Name=WP_223965385.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS33335;product=hypothetical protein;protein_id=WP_223965385.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 53542 54054 . - . ID=gene-LDO45_RS33340;Name=LDO45_RS33340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33340;old_locus_tag=BDI4_910054 NZ_CAJZAS010000251.1 Protein Homology CDS 53542 54054 . - 0 ID=cds-WP_223965386.1;Parent=gene-LDO45_RS33340;Dbxref=GenBank:WP_223965386.1;Name=WP_223965386.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012402745.1;locus_tag=LDO45_RS33340;product=hypothetical protein;protein_id=WP_223965386.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 54121 54375 . - . ID=gene-LDO45_RS33345;Name=LDO45_RS33345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33345;old_locus_tag=BDI4_910055 NZ_CAJZAS010000251.1 GeneMarkS-2+ CDS 54121 54375 . - 0 ID=cds-WP_223965387.1;Parent=gene-LDO45_RS33345;Dbxref=GenBank:WP_223965387.1;Name=WP_223965387.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS33345;product=hypothetical protein;protein_id=WP_223965387.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 54380 55447 . - . ID=gene-LDO45_RS33350;Name=LDO45_RS33350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33350;old_locus_tag=BDI4_910056 NZ_CAJZAS010000251.1 Protein Homology CDS 54380 55447 . - 0 ID=cds-WP_223965388.1;Parent=gene-LDO45_RS33350;Dbxref=GenBank:WP_223965388.1;Name=WP_223965388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006051207.1;locus_tag=LDO45_RS33350;product=hypothetical protein;protein_id=WP_223965388.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 55447 56667 . - . ID=gene-LDO45_RS33355;Name=LDO45_RS33355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33355;old_locus_tag=BDI4_910057 NZ_CAJZAS010000251.1 Protein Homology CDS 55447 56667 . - 0 ID=cds-WP_223965389.1;Parent=gene-LDO45_RS33355;Dbxref=GenBank:WP_223965389.1;Name=WP_223965389.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR03033.1;locus_tag=LDO45_RS33355;product=YqaJ viral recombinase family protein;protein_id=WP_223965389.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 57493 58473 . + . ID=gene-LDO45_RS33360;Name=LDO45_RS33360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33360;old_locus_tag=BDI4_910059 NZ_CAJZAS010000251.1 GeneMarkS-2+ CDS 57493 58473 . + 0 ID=cds-WP_223965390.1;Parent=gene-LDO45_RS33360;Dbxref=GenBank:WP_223965390.1;Name=WP_223965390.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS33360;product=hypothetical protein;protein_id=WP_223965390.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 58496 59266 . + . ID=gene-LDO45_RS33365;Name=LDO45_RS33365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33365;old_locus_tag=BDI4_910060 NZ_CAJZAS010000251.1 GeneMarkS-2+ CDS 58496 59266 . + 0 ID=cds-WP_223965391.1;Parent=gene-LDO45_RS33365;Dbxref=GenBank:WP_223965391.1;Name=WP_223965391.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS33365;product=hypothetical protein;protein_id=WP_223965391.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 59253 59726 . + . ID=gene-LDO45_RS33370;Name=LDO45_RS33370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33370;old_locus_tag=BDI4_910062 NZ_CAJZAS010000251.1 GeneMarkS-2+ CDS 59253 59726 . + 0 ID=cds-WP_223965392.1;Parent=gene-LDO45_RS33370;Dbxref=GenBank:WP_223965392.1;Name=WP_223965392.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS33370;product=hypothetical protein;protein_id=WP_223965392.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 59962 60177 . + . ID=gene-LDO45_RS33375;Name=LDO45_RS33375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33375;old_locus_tag=BDI4_910063 NZ_CAJZAS010000251.1 GeneMarkS-2+ CDS 59962 60177 . + 0 ID=cds-WP_223965393.1;Parent=gene-LDO45_RS33375;Dbxref=GenBank:WP_223965393.1;Name=WP_223965393.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS33375;product=hypothetical protein;protein_id=WP_223965393.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 60294 61742 . - . ID=gene-LDO45_RS33380;Name=LDO45_RS33380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33380;old_locus_tag=BDI4_910064 NZ_CAJZAS010000251.1 Protein Homology CDS 60294 61742 . - 0 ID=cds-WP_223965394.1;Parent=gene-LDO45_RS33380;Dbxref=GenBank:WP_223965394.1;Name=WP_223965394.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372633.1;locus_tag=LDO45_RS33380;product=hypothetical protein;protein_id=WP_223965394.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 61755 62042 . - . ID=gene-LDO45_RS33385;Name=LDO45_RS33385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33385;old_locus_tag=BDI4_910065 NZ_CAJZAS010000251.1 GeneMarkS-2+ CDS 61755 62042 . - 0 ID=cds-WP_223965395.1;Parent=gene-LDO45_RS33385;Dbxref=GenBank:WP_223965395.1;Name=WP_223965395.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS33385;product=PAAR domain-containing protein;protein_id=WP_223965395.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 62044 63351 . - . ID=gene-LDO45_RS33390;Name=LDO45_RS33390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33390;old_locus_tag=BDI4_910066 NZ_CAJZAS010000251.1 Protein Homology CDS 62044 63351 . - 0 ID=cds-WP_223965396.1;Parent=gene-LDO45_RS33390;Dbxref=GenBank:WP_223965396.1;Name=WP_223965396.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372635.1;locus_tag=LDO45_RS33390;product=hypothetical protein;protein_id=WP_223965396.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 63446 67081 . - . ID=gene-LDO45_RS33395;Name=LDO45_RS33395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33395;old_locus_tag=BDI4_910067 NZ_CAJZAS010000251.1 Protein Homology CDS 63446 67081 . - 0 ID=cds-WP_223965397.1;Parent=gene-LDO45_RS33395;Dbxref=GenBank:WP_223965397.1;Name=WP_223965397.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012372636.1;locus_tag=LDO45_RS33395;product=type VI secretion system Vgr family protein;protein_id=WP_223965397.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq gene 67395 67733 . - . ID=gene-LDO45_RS33400;Name=LDO45_RS33400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33400;old_locus_tag=BDI4_910068 NZ_CAJZAS010000251.1 GeneMarkS-2+ CDS 67395 67733 . - 0 ID=cds-WP_223965398.1;Parent=gene-LDO45_RS33400;Dbxref=GenBank:WP_223965398.1;Name=WP_223965398.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS33400;product=hypothetical protein;protein_id=WP_223965398.1;transl_table=11 NZ_CAJZAS010000251.1 RefSeq pseudogene 68205 68517 . + . ID=gene-LDO45_RS33405;Name=LDO45_RS33405;end_range=68517,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS33405;partial=true;pseudo=true NZ_CAJZAS010000251.1 GeneMarkS-2+ CDS 68205 68517 . + 0 ID=cds-LDO45_RS33405;Parent=gene-LDO45_RS33405;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=68517,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS33405;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000252.1 1 13432 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000252.1 RefSeq region 1 13432 . + . ID=NZ_CAJZAS010000252.1:1..13432;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_92 NZ_CAJZAS010000252.1 RefSeq gene 1 906 . + . ID=gene-LDO45_RS33410;Name=LDO45_RS33410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33410;old_locus_tag=BDI4_920001;partial=true;start_range=.,1 NZ_CAJZAS010000252.1 Protein Homology CDS 1 906 . + 0 ID=cds-WP_223965401.1;Parent=gene-LDO45_RS33410;Dbxref=GenBank:WP_223965401.1;Name=WP_223965401.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898408.1;locus_tag=LDO45_RS33410;partial=true;product=c-type cytochrome;protein_id=WP_223965401.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000252.1 RefSeq gene 941 2863 . - . ID=gene-LDO45_RS33415;Name=LDO45_RS33415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33415;old_locus_tag=BDI4_920002 NZ_CAJZAS010000252.1 Protein Homology CDS 941 2863 . - 0 ID=cds-WP_059532546.1;Parent=gene-LDO45_RS33415;Dbxref=GenBank:WP_059532546.1;Name=WP_059532546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006405949.1;locus_tag=LDO45_RS33415;product=SMP-30/gluconolactonase/LRE family protein;protein_id=WP_059532546.1;transl_table=11 NZ_CAJZAS010000252.1 RefSeq gene 3455 4648 . - . ID=gene-LDO45_RS33420;Name=LDO45_RS33420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33420;old_locus_tag=BDI4_920004 NZ_CAJZAS010000252.1 Protein Homology CDS 3455 4648 . - 0 ID=cds-WP_223965402.1;Parent=gene-LDO45_RS33420;Dbxref=GenBank:WP_223965402.1;Name=WP_223965402.1;Ontology_term=GO:0015288,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006757855.1;locus_tag=LDO45_RS33420;product=porin;protein_id=WP_223965402.1;transl_table=11 NZ_CAJZAS010000252.1 RefSeq gene 4961 5593 . + . ID=gene-LDO45_RS33425;Name=LDO45_RS33425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33425;old_locus_tag=BDI4_920006 NZ_CAJZAS010000252.1 Protein Homology CDS 4961 5593 . + 0 ID=cds-WP_175911847.1;Parent=gene-LDO45_RS33425;Dbxref=GenBank:WP_175911847.1;Name=WP_175911847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012339425.1;locus_tag=LDO45_RS33425;product=LysE family translocator;protein_id=WP_175911847.1;transl_table=11 NZ_CAJZAS010000252.1 RefSeq gene 5636 6172 . + . ID=gene-LDO45_RS33430;Name=LDO45_RS33430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33430;old_locus_tag=BDI4_920007 NZ_CAJZAS010000252.1 Protein Homology CDS 5636 6172 . + 0 ID=cds-WP_223965403.1;Parent=gene-LDO45_RS33430;Dbxref=GenBank:WP_223965403.1;Name=WP_223965403.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546941.1;locus_tag=LDO45_RS33430;product=GNAT family N-acetyltransferase;protein_id=WP_223965403.1;transl_table=11 NZ_CAJZAS010000252.1 RefSeq gene 6270 7004 . + . ID=gene-LDO45_RS33435;Name=LDO45_RS33435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33435;old_locus_tag=BDI4_920008 NZ_CAJZAS010000252.1 Protein Homology CDS 6270 7004 . + 0 ID=cds-WP_059532562.1;Parent=gene-LDO45_RS33435;Dbxref=GenBank:WP_059532562.1;Name=WP_059532562.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014898402.1;locus_tag=LDO45_RS33435;product=metallophosphoesterase;protein_id=WP_059532562.1;transl_table=11 NZ_CAJZAS010000252.1 RefSeq gene 7058 7669 . + . ID=gene-LDO45_RS33440;Name=LDO45_RS33440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33440;old_locus_tag=BDI4_920009 NZ_CAJZAS010000252.1 Protein Homology CDS 7058 7669 . + 0 ID=cds-WP_223965404.1;Parent=gene-LDO45_RS33440;Dbxref=GenBank:WP_223965404.1;Name=WP_223965404.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011354013.1;locus_tag=LDO45_RS33440;product=alpha/beta fold hydrolase;protein_id=WP_223965404.1;transl_table=11 NZ_CAJZAS010000252.1 RefSeq gene 7730 9052 . - . ID=gene-LDO45_RS33445;Name=LDO45_RS33445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33445;old_locus_tag=BDI4_920010 NZ_CAJZAS010000252.1 Protein Homology CDS 7730 9052 . - 0 ID=cds-WP_059697589.1;Parent=gene-LDO45_RS33445;Dbxref=GenBank:WP_059697589.1;Name=WP_059697589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750897.1;locus_tag=LDO45_RS33445;product=ATP-binding protein;protein_id=WP_059697589.1;transl_table=11 NZ_CAJZAS010000252.1 RefSeq gene 9049 9789 . - . ID=gene-LDO45_RS33450;Name=LDO45_RS33450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33450;old_locus_tag=BDI4_920011 NZ_CAJZAS010000252.1 Protein Homology CDS 9049 9789 . - 0 ID=cds-WP_059532572.1;Parent=gene-LDO45_RS33450;Dbxref=GenBank:WP_059532572.1;Name=WP_059532572.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750896.1;locus_tag=LDO45_RS33450;product=response regulator;protein_id=WP_059532572.1;transl_table=11 NZ_CAJZAS010000252.1 RefSeq gene 10017 10589 . + . ID=gene-LDO45_RS33455;Name=LDO45_RS33455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33455;old_locus_tag=BDI4_920012 NZ_CAJZAS010000252.1 Protein Homology CDS 10017 10589 . + 0 ID=cds-WP_059532574.1;Parent=gene-LDO45_RS33455;Dbxref=GenBank:WP_059532574.1;Name=WP_059532574.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006766468.1;locus_tag=LDO45_RS33455;product=thioredoxin family protein;protein_id=WP_059532574.1;transl_table=11 NZ_CAJZAS010000252.1 RefSeq gene 10780 11334 . + . ID=gene-LDO45_RS33460;Name=LDO45_RS33460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33460;old_locus_tag=BDI4_920013 NZ_CAJZAS010000252.1 Protein Homology CDS 10780 11334 . + 0 ID=cds-WP_223965405.1;Parent=gene-LDO45_RS33460;Dbxref=GenBank:WP_223965405.1;Name=WP_223965405.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875781.1;locus_tag=LDO45_RS33460;product=PAAR domain-containing protein;protein_id=WP_223965405.1;transl_table=11 NZ_CAJZAS010000252.1 RefSeq gene 11338 11970 . + . ID=gene-LDO45_RS33465;Name=LDO45_RS33465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33465;old_locus_tag=BDI4_920015 NZ_CAJZAS010000252.1 Protein Homology CDS 11338 11970 . + 0 ID=cds-WP_223965406.1;Parent=gene-LDO45_RS33465;Dbxref=GenBank:WP_223965406.1;Name=WP_223965406.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010089498.1;locus_tag=LDO45_RS33465;product=type VI secretion system amidase effector protein Tae4;protein_id=WP_223965406.1;transl_table=11 NZ_CAJZAS010000252.1 RefSeq gene 12030 12284 . + . ID=gene-LDO45_RS33470;Name=LDO45_RS33470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33470 NZ_CAJZAS010000252.1 GeneMarkS-2+ CDS 12030 12284 . + 0 ID=cds-WP_156436978.1;Parent=gene-LDO45_RS33470;Dbxref=GenBank:WP_156436978.1;Name=WP_156436978.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS33470;product=hypothetical protein;protein_id=WP_156436978.1;transl_table=11 NZ_CAJZAS010000252.1 RefSeq gene 12447 13085 . - . ID=gene-LDO45_RS33475;Name=LDO45_RS33475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33475;old_locus_tag=BDI4_920017 NZ_CAJZAS010000252.1 Protein Homology CDS 12447 13085 . - 0 ID=cds-WP_059532580.1;Parent=gene-LDO45_RS33475;Dbxref=GenBank:WP_059532580.1;Name=WP_059532580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011546936.1;locus_tag=LDO45_RS33475;product=FMN-binding negative transcriptional regulator;protein_id=WP_059532580.1;transl_table=11 NZ_CAJZAS010000252.1 RefSeq gene 13211 13432 . + . ID=gene-LDO45_RS33480;Name=LDO45_RS33480;end_range=13432,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33480;partial=true NZ_CAJZAS010000252.1 Protein Homology CDS 13211 13432 . + 0 ID=cds-WP_223965407.1;Parent=gene-LDO45_RS33480;Dbxref=GenBank:WP_223965407.1;Name=WP_223965407.1;Ontology_term=GO:0006355,GO:0003700;end_range=13432,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004535882.1;locus_tag=LDO45_RS33480;partial=true;product=GntR family transcriptional regulator;protein_id=WP_223965407.1;transl_table=11 ##sequence-region NZ_CAJZAS010000253.1 1 28619 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000253.1 RefSeq region 1 28619 . + . ID=NZ_CAJZAS010000253.1:1..28619;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_93 NZ_CAJZAS010000253.1 RefSeq gene 1 302 . - . ID=gene-LDO45_RS33485;Name=LDO45_RS33485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33485;partial=true;start_range=.,1 NZ_CAJZAS010000253.1 Protein Homology CDS 1 302 . - 0 ID=cds-WP_290371050.1;Parent=gene-LDO45_RS33485;Dbxref=GenBank:WP_290371050.1;Name=WP_290371050.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917772.1;locus_tag=LDO45_RS33485;partial=true;product=biotin/lipoyl-containing protein;protein_id=WP_290371050.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000253.1 RefSeq gene 373 3069 . - . ID=gene-LDO45_RS33490;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=LDO45_RS33490;old_locus_tag=BDI4_930002 NZ_CAJZAS010000253.1 Protein Homology CDS 373 3069 . - 0 ID=cds-WP_059535874.1;Parent=gene-LDO45_RS33490;Dbxref=GenBank:WP_059535874.1;Name=WP_059535874.1;Ontology_term=GO:0006086,GO:0004738,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase activity|0004738||IEA;go_process=acetyl-CoA biosynthetic process from pyruvate|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478378.1;locus_tag=LDO45_RS33490;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_059535874.1;transl_table=11 NZ_CAJZAS010000253.1 RefSeq gene 3343 5859 . + . ID=gene-LDO45_RS33495;Name=fixL;gbkey=Gene;gene=fixL;gene_biotype=protein_coding;locus_tag=LDO45_RS33495;old_locus_tag=BDI4_930003 NZ_CAJZAS010000253.1 Protein Homology CDS 3343 5859 . + 0 ID=cds-WP_059464201.1;Parent=gene-LDO45_RS33495;Dbxref=GenBank:WP_059464201.1;Name=WP_059464201.1;gbkey=CDS;gene=fixL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758934.1;locus_tag=LDO45_RS33495;product=oxygen sensor histidine kinase FixL;protein_id=WP_059464201.1;transl_table=11 NZ_CAJZAS010000253.1 RefSeq gene 5856 6494 . + . ID=gene-LDO45_RS33500;Name=fixJ;gbkey=Gene;gene=fixJ;gene_biotype=protein_coding;locus_tag=LDO45_RS33500;old_locus_tag=BDI4_930004 NZ_CAJZAS010000253.1 Protein Homology CDS 5856 6494 . + 0 ID=cds-WP_006493245.1;Parent=gene-LDO45_RS33500;Dbxref=GenBank:WP_006493245.1;Name=WP_006493245.1;gbkey=CDS;gene=fixJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013698749.1;locus_tag=LDO45_RS33500;product=oxygen response regulator transcription factor FixJ;protein_id=WP_006493245.1;transl_table=11 NZ_CAJZAS010000253.1 RefSeq gene 6739 7596 . + . ID=gene-LDO45_RS33505;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=LDO45_RS33505;old_locus_tag=BDI4_930005 NZ_CAJZAS010000253.1 Protein Homology CDS 6739 7596 . + 0 ID=cds-WP_059464202.1;Parent=gene-LDO45_RS33505;Dbxref=GenBank:WP_059464202.1;Name=WP_059464202.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896614.1;locus_tag=LDO45_RS33505;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_059464202.1;transl_table=11 NZ_CAJZAS010000253.1 RefSeq gene 7851 9938 . + . ID=gene-LDO45_RS33510;Name=LDO45_RS33510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33510;old_locus_tag=BDI4_930006 NZ_CAJZAS010000253.1 Protein Homology CDS 7851 9938 . + 0 ID=cds-WP_223965408.1;Parent=gene-LDO45_RS33510;Dbxref=GenBank:WP_223965408.1;Name=WP_223965408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011549448.1;locus_tag=LDO45_RS33510;product=M3 family metallopeptidase;protein_id=WP_223965408.1;transl_table=11 NZ_CAJZAS010000253.1 RefSeq gene 9999 11204 . - . ID=gene-LDO45_RS33515;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=LDO45_RS33515;old_locus_tag=BDI4_930007 NZ_CAJZAS010000253.1 Protein Homology CDS 9999 11204 . - 0 ID=cds-WP_059535878.1;Parent=gene-LDO45_RS33515;Dbxref=GenBank:WP_059535878.1;Name=WP_059535878.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364230.1;locus_tag=LDO45_RS33515;product=DNA polymerase IV;protein_id=WP_059535878.1;transl_table=11 NZ_CAJZAS010000253.1 RefSeq gene 11375 12067 . + . ID=gene-LDO45_RS33520;Name=LDO45_RS33520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33520;old_locus_tag=BDI4_930008 NZ_CAJZAS010000253.1 Protein Homology CDS 11375 12067 . + 0 ID=cds-WP_059535880.1;Parent=gene-LDO45_RS33520;Dbxref=GenBank:WP_059535880.1;Name=WP_059535880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006758930.1;locus_tag=LDO45_RS33520;product=aspartate/glutamate racemase family protein;protein_id=WP_059535880.1;transl_table=11 NZ_CAJZAS010000253.1 RefSeq gene 12150 12226 . - . ID=gene-LDO45_RS33525;Name=LDO45_RS33525;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS33525;old_locus_tag=BDI4_TRNA33 NZ_CAJZAS010000253.1 tRNAscan-SE tRNA 12150 12226 . - . ID=rna-LDO45_RS33525;Parent=gene-LDO45_RS33525;anticodon=(pos:complement(12190..12192));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS33525;product=tRNA-Met NZ_CAJZAS010000253.1 tRNAscan-SE exon 12150 12226 . - . ID=exon-LDO45_RS33525-1;Parent=rna-LDO45_RS33525;anticodon=(pos:complement(12190..12192));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS33525;product=tRNA-Met NZ_CAJZAS010000253.1 RefSeq gene 12408 13184 . + . ID=gene-LDO45_RS33530;Name=xth;gbkey=Gene;gene=xth;gene_biotype=protein_coding;locus_tag=LDO45_RS33530;old_locus_tag=BDI4_930009 NZ_CAJZAS010000253.1 Protein Homology CDS 12408 13184 . + 0 ID=cds-WP_218921273.1;Parent=gene-LDO45_RS33530;Dbxref=GenBank:WP_218921273.1;Name=WP_218921273.1;Ontology_term=GO:0006281,GO:0008311;gbkey=CDS;gene=xth;go_function=double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009890139.1;locus_tag=LDO45_RS33530;product=exodeoxyribonuclease III;protein_id=WP_218921273.1;transl_table=11 NZ_CAJZAS010000253.1 RefSeq gene 13210 15336 . - . ID=gene-LDO45_RS33535;Name=LDO45_RS33535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33535;old_locus_tag=BDI4_930010 NZ_CAJZAS010000253.1 Protein Homology CDS 13210 15336 . - 0 ID=cds-WP_223965409.1;Parent=gene-LDO45_RS33535;Dbxref=GenBank:WP_223965409.1;Name=WP_223965409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478368.1;locus_tag=LDO45_RS33535;product=prolyl oligopeptidase family protein;protein_id=WP_223965409.1;transl_table=11 NZ_CAJZAS010000253.1 RefSeq gene 15416 16945 . - . ID=gene-LDO45_RS33540;Name=ntrC;gbkey=Gene;gene=ntrC;gene_biotype=protein_coding;locus_tag=LDO45_RS33540;old_locus_tag=BDI4_930011 NZ_CAJZAS010000253.1 Protein Homology CDS 15416 16945 . - 0 ID=cds-WP_059535886.1;Parent=gene-LDO45_RS33540;Dbxref=GenBank:WP_059535886.1;Name=WP_059535886.1;Ontology_term=GO:0000160,GO:0006808,GO:0000156,GO:0003677,GO:0005524;gbkey=CDS;gene=ntrC;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413938.1;locus_tag=LDO45_RS33540;product=nitrogen regulation protein NR(I);protein_id=WP_059535886.1;transl_table=11 NZ_CAJZAS010000253.1 RefSeq gene 16992 18134 . - . ID=gene-LDO45_RS33545;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=LDO45_RS33545;old_locus_tag=BDI4_930012 NZ_CAJZAS010000253.1 Protein Homology CDS 16992 18134 . - 0 ID=cds-WP_059535888.1;Parent=gene-LDO45_RS33545;Dbxref=GenBank:WP_059535888.1;Name=WP_059535888.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004192981.1;locus_tag=LDO45_RS33545;product=nitrogen regulation protein NR(II);protein_id=WP_059535888.1;transl_table=11 NZ_CAJZAS010000253.1 RefSeq gene 18296 19711 . - . ID=gene-LDO45_RS33550;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=LDO45_RS33550;old_locus_tag=BDI4_930013 NZ_CAJZAS010000253.1 Protein Homology CDS 18296 19711 . - 0 ID=cds-WP_059535891.1;Parent=gene-LDO45_RS33550;Dbxref=GenBank:WP_059535891.1;Name=WP_059535891.1;Ontology_term=GO:0006542,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017777963.1;locus_tag=LDO45_RS33550;product=type I glutamate--ammonia ligase;protein_id=WP_059535891.1;transl_table=11 NZ_CAJZAS010000253.1 RefSeq gene 20118 20582 . + . ID=gene-LDO45_RS33555;Name=LDO45_RS33555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33555;old_locus_tag=BDI4_930015 NZ_CAJZAS010000253.1 Protein Homology CDS 20118 20582 . + 0 ID=cds-WP_059535893.1;Parent=gene-LDO45_RS33555;Dbxref=GenBank:WP_059535893.1;Name=WP_059535893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010116266.1;locus_tag=LDO45_RS33555;product=rhodanese-like domain-containing protein;protein_id=WP_059535893.1;transl_table=11 NZ_CAJZAS010000253.1 RefSeq gene 20720 21535 . - . ID=gene-LDO45_RS33560;Name=LDO45_RS33560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33560;old_locus_tag=BDI4_930016 NZ_CAJZAS010000253.1 Protein Homology CDS 20720 21535 . - 0 ID=cds-WP_223965410.1;Parent=gene-LDO45_RS33560;Dbxref=GenBank:WP_223965410.1;Name=WP_223965410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896604.1;locus_tag=LDO45_RS33560;product=molybdopterin-binding protein;protein_id=WP_223965410.1;transl_table=11 NZ_CAJZAS010000253.1 RefSeq gene 21532 22359 . - . ID=gene-LDO45_RS33565;Name=LDO45_RS33565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33565;old_locus_tag=BDI4_930017 NZ_CAJZAS010000253.1 Protein Homology CDS 21532 22359 . - 0 ID=cds-WP_059535897.1;Parent=gene-LDO45_RS33565;Dbxref=GenBank:WP_059535897.1;Name=WP_059535897.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006478362.1;locus_tag=LDO45_RS33565;product=EI24 domain-containing protein;protein_id=WP_059535897.1;transl_table=11 NZ_CAJZAS010000253.1 RefSeq gene 22471 23445 . - . ID=gene-LDO45_RS33570;Name=LDO45_RS33570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33570;old_locus_tag=BDI4_930018 NZ_CAJZAS010000253.1 Protein Homology CDS 22471 23445 . - 0 ID=cds-WP_059535899.1;Parent=gene-LDO45_RS33570;Dbxref=GenBank:WP_059535899.1;Name=WP_059535899.1;Ontology_term=GO:0006629,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011657401.1;locus_tag=LDO45_RS33570;product=sterol desaturase family protein;protein_id=WP_059535899.1;transl_table=11 NZ_CAJZAS010000253.1 RefSeq gene 23462 24451 . - . ID=gene-LDO45_RS33575;Name=LDO45_RS33575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33575;old_locus_tag=BDI4_930019 NZ_CAJZAS010000253.1 Protein Homology CDS 23462 24451 . - 0 ID=cds-WP_223965411.1;Parent=gene-LDO45_RS33575;Dbxref=GenBank:WP_223965411.1;Name=WP_223965411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015600540.1;locus_tag=LDO45_RS33575;product=beta-propeller fold lactonase family protein;protein_id=WP_223965411.1;transl_table=11 NZ_CAJZAS010000253.1 RefSeq gene 24613 28530 . - . ID=gene-LDO45_RS33580;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=LDO45_RS33580;old_locus_tag=BDI4_930021 NZ_CAJZAS010000253.1 Protein Homology CDS 24613 28530 . - 0 ID=cds-WP_223965412.1;Parent=gene-LDO45_RS33580;Dbxref=GenBank:WP_223965412.1;Name=WP_223965412.1;Ontology_term=GO:0003724;gbkey=CDS;gene=hrpA;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011694328.1;locus_tag=LDO45_RS33580;product=ATP-dependent RNA helicase HrpA;protein_id=WP_223965412.1;transl_table=11 ##sequence-region NZ_CAJZAS010000254.1 1 25022 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000254.1 RefSeq region 1 25022 . + . ID=NZ_CAJZAS010000254.1:1..25022;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_94 NZ_CAJZAS010000254.1 RefSeq pseudogene 1 276 . + . ID=gene-LDO45_RS33585;Name=LDO45_RS33585;end_range=276,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS33585;old_locus_tag=BDI4_940001;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000254.1 Protein Homology CDS 1 276 . + 2 ID=cds-LDO45_RS33585;Parent=gene-LDO45_RS33585;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=276,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012328876.1;locus_tag=LDO45_RS33585;partial=true;product=AMP-binding protein;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000254.1 RefSeq gene 428 772 . + . ID=gene-LDO45_RS33590;Name=LDO45_RS33590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33590;old_locus_tag=BDI4_940002 NZ_CAJZAS010000254.1 Protein Homology CDS 428 772 . + 0 ID=cds-WP_059535728.1;Parent=gene-LDO45_RS33590;Dbxref=GenBank:WP_059535728.1;Name=WP_059535728.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213036.1;locus_tag=LDO45_RS33590;product=DUF4212 domain-containing protein;protein_id=WP_059535728.1;transl_table=11 NZ_CAJZAS010000254.1 RefSeq gene 776 2791 . + . ID=gene-LDO45_RS33595;Name=LDO45_RS33595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33595;old_locus_tag=BDI4_940003 NZ_CAJZAS010000254.1 Protein Homology CDS 776 2791 . + 0 ID=cds-WP_059689162.1;Parent=gene-LDO45_RS33595;Dbxref=GenBank:WP_059689162.1;Name=WP_059689162.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004187151.1;locus_tag=LDO45_RS33595;product=sodium:solute symporter family protein;protein_id=WP_059689162.1;transl_table=11 NZ_CAJZAS010000254.1 RefSeq gene 2908 4524 . - . ID=gene-LDO45_RS33600;Name=LDO45_RS33600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33600;old_locus_tag=BDI4_940004 NZ_CAJZAS010000254.1 Protein Homology CDS 2908 4524 . - 0 ID=cds-WP_223965413.1;Parent=gene-LDO45_RS33600;Dbxref=GenBank:WP_223965413.1;Name=WP_223965413.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016362.5;locus_tag=LDO45_RS33600;product=restriction endonuclease;protein_id=WP_223965413.1;transl_table=11 NZ_CAJZAS010000254.1 RefSeq gene 4643 5785 . - . ID=gene-LDO45_RS33605;Name=LDO45_RS33605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33605;old_locus_tag=BDI4_940006 NZ_CAJZAS010000254.1 Protein Homology CDS 4643 5785 . - 0 ID=cds-WP_223965427.1;Parent=gene-LDO45_RS33605;Dbxref=GenBank:WP_223965427.1;Name=WP_223965427.1;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612016.1;locus_tag=LDO45_RS33605;product=IS3 family transposase;protein_id=WP_223965427.1;transl_table=11 NZ_CAJZAS010000254.1 RefSeq gene 5965 6834 . - . ID=gene-LDO45_RS33610;Name=LDO45_RS33610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33610;old_locus_tag=BDI4_940007 NZ_CAJZAS010000254.1 GeneMarkS-2+ CDS 5965 6834 . - 0 ID=cds-WP_223965414.1;Parent=gene-LDO45_RS33610;Dbxref=GenBank:WP_223965414.1;Name=WP_223965414.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS33610;product=hypothetical protein;protein_id=WP_223965414.1;transl_table=11 NZ_CAJZAS010000254.1 RefSeq gene 7288 8205 . - . ID=gene-LDO45_RS33615;Name=kwaB;gbkey=Gene;gene=kwaB;gene_biotype=protein_coding;locus_tag=LDO45_RS33615;old_locus_tag=BDI4_940009 NZ_CAJZAS010000254.1 Protein Homology CDS 7288 8205 . - 0 ID=cds-WP_223965415.1;Parent=gene-LDO45_RS33615;Dbxref=GenBank:WP_223965415.1;Name=WP_223965415.1;gbkey=CDS;gene=kwaB;inference=COORDINATES: protein motif:HMM:NF041623.1;locus_tag=LDO45_RS33615;product=anti-phage protein KwaB;protein_id=WP_223965415.1;transl_table=11 NZ_CAJZAS010000254.1 RefSeq gene 8207 8785 . - . ID=gene-LDO45_RS33620;Name=kwaA;gbkey=Gene;gene=kwaA;gene_biotype=protein_coding;locus_tag=LDO45_RS33620;old_locus_tag=BDI4_940010 NZ_CAJZAS010000254.1 Protein Homology CDS 8207 8785 . - 0 ID=cds-WP_223965416.1;Parent=gene-LDO45_RS33620;Dbxref=GenBank:WP_223965416.1;Name=WP_223965416.1;gbkey=CDS;gene=kwaA;inference=COORDINATES: protein motif:HMM:NF041622.1;locus_tag=LDO45_RS33620;product=anti-phage protein KwaA;protein_id=WP_223965416.1;transl_table=11 NZ_CAJZAS010000254.1 RefSeq gene 9247 9337 . - . ID=gene-LDO45_RS33625;Name=LDO45_RS33625;gbkey=Gene;gene_biotype=tRNA;locus_tag=LDO45_RS33625;old_locus_tag=BDI4_TRNA32 NZ_CAJZAS010000254.1 tRNAscan-SE tRNA 9247 9337 . - . ID=rna-LDO45_RS33625;Parent=gene-LDO45_RS33625;anticodon=(pos:complement(9301..9303));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS33625;product=tRNA-Ser NZ_CAJZAS010000254.1 tRNAscan-SE exon 9247 9337 . - . ID=exon-LDO45_RS33625-1;Parent=rna-LDO45_RS33625;anticodon=(pos:complement(9301..9303));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=LDO45_RS33625;product=tRNA-Ser NZ_CAJZAS010000254.1 RefSeq gene 9561 10181 . + . ID=gene-LDO45_RS33630;Name=LDO45_RS33630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33630;old_locus_tag=BDI4_940013 NZ_CAJZAS010000254.1 Protein Homology CDS 9561 10181 . + 0 ID=cds-WP_059535722.1;Parent=gene-LDO45_RS33630;Dbxref=GenBank:WP_059535722.1;Name=WP_059535722.1;Ontology_term=GO:0016311,GO:0016791,GO:0046872;gbkey=CDS;go_function=phosphatase activity|0016791||IEA,metal ion binding|0046872||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012467662.1;locus_tag=LDO45_RS33630;product=HAD family hydrolase;protein_id=WP_059535722.1;transl_table=11 NZ_CAJZAS010000254.1 RefSeq gene 10226 11338 . - . ID=gene-LDO45_RS33635;Name=LDO45_RS33635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33635;old_locus_tag=BDI4_940014 NZ_CAJZAS010000254.1 Protein Homology CDS 10226 11338 . - 0 ID=cds-WP_223965417.1;Parent=gene-LDO45_RS33635;Dbxref=GenBank:WP_223965417.1;Name=WP_223965417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006752418.1;locus_tag=LDO45_RS33635;product=fatty acid desaturase;protein_id=WP_223965417.1;transl_table=11 NZ_CAJZAS010000254.1 RefSeq gene 11565 12602 . + . ID=gene-LDO45_RS33640;Name=LDO45_RS33640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33640;old_locus_tag=BDI4_940015 NZ_CAJZAS010000254.1 Protein Homology CDS 11565 12602 . + 0 ID=cds-WP_059689175.1;Parent=gene-LDO45_RS33640;Dbxref=GenBank:WP_059689175.1;Name=WP_059689175.1;Ontology_term=GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896560.1;locus_tag=LDO45_RS33640;product=AraC family transcriptional regulator;protein_id=WP_059689175.1;transl_table=11 NZ_CAJZAS010000254.1 RefSeq gene 12672 13721 . - . ID=gene-LDO45_RS33645;Name=LDO45_RS33645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33645;old_locus_tag=BDI4_940016 NZ_CAJZAS010000254.1 Protein Homology CDS 12672 13721 . - 0 ID=cds-WP_223965418.1;Parent=gene-LDO45_RS33645;Dbxref=GenBank:WP_223965418.1;Name=WP_223965418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407949.1;locus_tag=LDO45_RS33645;product=beta-propeller fold lactonase family protein;protein_id=WP_223965418.1;transl_table=11 NZ_CAJZAS010000254.1 RefSeq gene 13708 15069 . - . ID=gene-LDO45_RS33650;Name=LDO45_RS33650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33650;old_locus_tag=BDI4_940017 NZ_CAJZAS010000254.1 Protein Homology CDS 13708 15069 . - 0 ID=cds-WP_059689177.1;Parent=gene-LDO45_RS33650;Dbxref=GenBank:WP_059689177.1;Name=WP_059689177.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006761015.1;locus_tag=LDO45_RS33650;product=MFS transporter;protein_id=WP_059689177.1;transl_table=11 NZ_CAJZAS010000254.1 RefSeq gene 15350 16537 . - . ID=gene-LDO45_RS33655;Name=LDO45_RS33655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33655;old_locus_tag=BDI4_940018 NZ_CAJZAS010000254.1 Protein Homology CDS 15350 16537 . - 0 ID=cds-WP_223965419.1;Parent=gene-LDO45_RS33655;Dbxref=GenBank:WP_223965419.1;Name=WP_223965419.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486068.1;locus_tag=LDO45_RS33655;product=helix-turn-helix transcriptional regulator;protein_id=WP_223965419.1;transl_table=11 NZ_CAJZAS010000254.1 RefSeq gene 16660 18573 . - . ID=gene-LDO45_RS33660;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=LDO45_RS33660;old_locus_tag=BDI4_940019 NZ_CAJZAS010000254.1 Protein Homology CDS 16660 18573 . - 0 ID=cds-WP_223965420.1;Parent=gene-LDO45_RS33660;Dbxref=GenBank:WP_223965420.1;Name=WP_223965420.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006497782.1;locus_tag=LDO45_RS33660;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_223965420.1;transl_table=11 NZ_CAJZAS010000254.1 RefSeq pseudogene 18573 19493 . - . ID=gene-LDO45_RS33665;Name=cysD;end_range=19493,.;gbkey=Gene;gene=cysD;gene_biotype=pseudogene;locus_tag=LDO45_RS33665;old_locus_tag=BDI4_940020;partial=true;pseudo=true NZ_CAJZAS010000254.1 Protein Homology CDS 18573 19493 . - 0 ID=cds-LDO45_RS33665;Parent=gene-LDO45_RS33665;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0000103,GO:0004781;end_range=19493,.;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: protein motif:HMM:NF009214.0;locus_tag=LDO45_RS33665;partial=true;product=sulfate adenylyltransferase subunit CysD;pseudo=true;transl_table=11 NZ_CAJZAS010000254.1 RefSeq gene 19684 20793 . + . ID=gene-LDO45_RS33670;Name=LDO45_RS33670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33670;old_locus_tag=BDI4_940022 NZ_CAJZAS010000254.1 Protein Homology CDS 19684 20793 . + 0 ID=cds-WP_223965422.1;Parent=gene-LDO45_RS33670;Dbxref=GenBank:WP_223965422.1;Name=WP_223965422.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896566.1;locus_tag=LDO45_RS33670;product=DUF1214 domain-containing protein;protein_id=WP_223965422.1;transl_table=11 NZ_CAJZAS010000254.1 RefSeq gene 20790 21983 . + . ID=gene-LDO45_RS33675;Name=LDO45_RS33675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33675;old_locus_tag=BDI4_940021 NZ_CAJZAS010000254.1 Protein Homology CDS 20790 21983 . + 0 ID=cds-WP_223965423.1;Parent=gene-LDO45_RS33675;Dbxref=GenBank:WP_223965423.1;Name=WP_223965423.1;Ontology_term=GO:0008146,GO:0050656;gbkey=CDS;go_function=sulfotransferase activity|0008146||IEA,3'-phosphoadenosine 5'-phosphosulfate binding|0050656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014896567.1;locus_tag=LDO45_RS33675;product=sulfotransferase;protein_id=WP_223965423.1;transl_table=11 NZ_CAJZAS010000254.1 RefSeq gene 22024 22815 . + . ID=gene-LDO45_RS33680;Name=LDO45_RS33680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33680;old_locus_tag=BDI4_940023 NZ_CAJZAS010000254.1 Protein Homology CDS 22024 22815 . + 0 ID=cds-WP_223965424.1;Parent=gene-LDO45_RS33680;Dbxref=GenBank:WP_223965424.1;Name=WP_223965424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011352620.1;locus_tag=LDO45_RS33680;product=SDR family oxidoreductase;protein_id=WP_223965424.1;transl_table=11 NZ_CAJZAS010000254.1 RefSeq gene 22833 23819 . + . ID=gene-LDO45_RS33685;Name=LDO45_RS33685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33685;old_locus_tag=BDI4_940024 NZ_CAJZAS010000254.1 Protein Homology CDS 22833 23819 . + 0 ID=cds-WP_175915402.1;Parent=gene-LDO45_RS33685;Dbxref=GenBank:WP_175915402.1;Name=WP_175915402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012213041.1;locus_tag=LDO45_RS33685;product=acetyltransferase;protein_id=WP_175915402.1;transl_table=11 NZ_CAJZAS010000254.1 RefSeq gene 23845 24324 . - . ID=gene-LDO45_RS33690;Name=LDO45_RS33690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33690;old_locus_tag=BDI4_940025 NZ_CAJZAS010000254.1 Protein Homology CDS 23845 24324 . - 0 ID=cds-WP_059535703.1;Parent=gene-LDO45_RS33690;Dbxref=GenBank:WP_059535703.1;Name=WP_059535703.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006486060.1;locus_tag=LDO45_RS33690;product=SRPBCC domain-containing protein;protein_id=WP_059535703.1;transl_table=11 NZ_CAJZAS010000254.1 RefSeq gene 24643 25022 . + . ID=gene-LDO45_RS33695;Name=LDO45_RS33695;end_range=25022,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33695;partial=true NZ_CAJZAS010000254.1 Protein Homology CDS 24643 25022 . + 0 ID=cds-WP_223965425.1;Parent=gene-LDO45_RS33695;Dbxref=GenBank:WP_223965425.1;Name=WP_223965425.1;end_range=25022,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364268.1;locus_tag=LDO45_RS33695;partial=true;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_223965425.1;transl_table=11 ##sequence-region NZ_CAJZAS010000255.1 1 27203 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000255.1 RefSeq region 1 27203 . + . ID=NZ_CAJZAS010000255.1:1..27203;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_95 NZ_CAJZAS010000255.1 RefSeq pseudogene 1 620 . - . ID=gene-LDO45_RS33700;Name=LDO45_RS33700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS33700;partial=true;pseudo=true;start_range=.,1 NZ_CAJZAS010000255.1 Protein Homology CDS 1 620 . - 0 ID=cds-LDO45_RS33700;Parent=gene-LDO45_RS33700;Note=frameshifted%3B incomplete%3B missing C-terminus;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895881.1;locus_tag=LDO45_RS33700;partial=true;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;pseudo=true;start_range=.,1;transl_table=11 NZ_CAJZAS010000255.1 RefSeq gene 617 1963 . - . ID=gene-LDO45_RS33705;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=LDO45_RS33705;old_locus_tag=BDI4_950003 NZ_CAJZAS010000255.1 Protein Homology CDS 617 1963 . - 0 ID=cds-WP_059523950.1;Parent=gene-LDO45_RS33705;Dbxref=GenBank:WP_059523950.1;Name=WP_059523950.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010090506.1;locus_tag=LDO45_RS33705;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_059523950.1;transl_table=11 NZ_CAJZAS010000255.1 RefSeq gene 2488 3747 . - . ID=gene-LDO45_RS33710;Name=LDO45_RS33710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33710;old_locus_tag=BDI4_950004 NZ_CAJZAS010000255.1 Protein Homology CDS 2488 3747 . - 0 ID=cds-WP_223965428.1;Parent=gene-LDO45_RS33710;Dbxref=GenBank:WP_223965428.1;Name=WP_223965428.1;Ontology_term=GO:0016787,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006414319.1;locus_tag=LDO45_RS33710;product=dienelactone hydrolase family protein;protein_id=WP_223965428.1;transl_table=11 NZ_CAJZAS010000255.1 RefSeq gene 3855 4292 . - . ID=gene-LDO45_RS33715;Name=LDO45_RS33715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33715;old_locus_tag=BDI4_950005 NZ_CAJZAS010000255.1 Protein Homology CDS 3855 4292 . - 0 ID=cds-WP_223965429.1;Parent=gene-LDO45_RS33715;Dbxref=GenBank:WP_223965429.1;Name=WP_223965429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006495438.1;locus_tag=LDO45_RS33715;product=YchJ family protein;protein_id=WP_223965429.1;transl_table=11 NZ_CAJZAS010000255.1 RefSeq gene 4332 5009 . - . ID=gene-LDO45_RS33720;Name=LDO45_RS33720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33720;old_locus_tag=BDI4_950006 NZ_CAJZAS010000255.1 Protein Homology CDS 4332 5009 . - 0 ID=cds-WP_059524034.1;Parent=gene-LDO45_RS33720;Dbxref=GenBank:WP_059524034.1;Name=WP_059524034.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895885.1;locus_tag=LDO45_RS33720;product=SDR family oxidoreductase;protein_id=WP_059524034.1;transl_table=11 NZ_CAJZAS010000255.1 RefSeq gene 5126 5893 . - . ID=gene-LDO45_RS33725;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=LDO45_RS33725;old_locus_tag=BDI4_950007 NZ_CAJZAS010000255.1 Protein Homology CDS 5126 5893 . - 0 ID=cds-WP_223965430.1;Parent=gene-LDO45_RS33725;Dbxref=GenBank:WP_223965430.1;Name=WP_223965430.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006493618.1;locus_tag=LDO45_RS33725;product=carbonate dehydratase;protein_id=WP_223965430.1;transl_table=11 NZ_CAJZAS010000255.1 RefSeq gene 5961 7781 . - . ID=gene-LDO45_RS33730;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=LDO45_RS33730;old_locus_tag=BDI4_950008 NZ_CAJZAS010000255.1 Protein Homology CDS 5961 7781 . - 0 ID=cds-WP_175909231.1;Parent=gene-LDO45_RS33730;Dbxref=GenBank:WP_175909231.1;Name=WP_175909231.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407100.1;locus_tag=LDO45_RS33730;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_175909231.1;transl_table=11 NZ_CAJZAS010000255.1 RefSeq gene 8109 9188 . + . ID=gene-LDO45_RS33735;Name=LDO45_RS33735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33735;old_locus_tag=BDI4_950009 NZ_CAJZAS010000255.1 Protein Homology CDS 8109 9188 . + 0 ID=cds-WP_223965431.1;Parent=gene-LDO45_RS33735;Dbxref=GenBank:WP_223965431.1;Name=WP_223965431.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407098.1;locus_tag=LDO45_RS33735;product=MBL fold metallo-hydrolase;protein_id=WP_223965431.1;transl_table=11 NZ_CAJZAS010000255.1 RefSeq gene 9205 10845 . - . ID=gene-LDO45_RS33740;Name=LDO45_RS33740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33740;old_locus_tag=BDI4_950010 NZ_CAJZAS010000255.1 Protein Homology CDS 9205 10845 . - 0 ID=cds-WP_223965432.1;Parent=gene-LDO45_RS33740;Dbxref=GenBank:WP_223965432.1;Name=WP_223965432.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895889.1;locus_tag=LDO45_RS33740;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_223965432.1;transl_table=11 NZ_CAJZAS010000255.1 RefSeq gene 11036 12631 . - . ID=gene-LDO45_RS33745;Name=LDO45_RS33745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33745;old_locus_tag=BDI4_950011 NZ_CAJZAS010000255.1 Protein Homology CDS 11036 12631 . - 0 ID=cds-WP_059691407.1;Parent=gene-LDO45_RS33745;Dbxref=GenBank:WP_059691407.1;Name=WP_059691407.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895890.1;locus_tag=LDO45_RS33745;product=ABC transporter substrate-binding protein;protein_id=WP_059691407.1;transl_table=11 NZ_CAJZAS010000255.1 RefSeq gene 13049 13822 . - . ID=gene-LDO45_RS33750;Name=LDO45_RS33750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33750;old_locus_tag=BDI4_950012 NZ_CAJZAS010000255.1 Protein Homology CDS 13049 13822 . - 0 ID=cds-WP_059465877.1;Parent=gene-LDO45_RS33750;Dbxref=GenBank:WP_059465877.1;Name=WP_059465877.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886170.1;locus_tag=LDO45_RS33750;product=SDR family oxidoreductase;protein_id=WP_059465877.1;transl_table=11 NZ_CAJZAS010000255.1 RefSeq gene 13842 14483 . - . ID=gene-LDO45_RS33755;Name=LDO45_RS33755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33755;old_locus_tag=BDI4_950013 NZ_CAJZAS010000255.1 Protein Homology CDS 13842 14483 . - 0 ID=cds-WP_059465878.1;Parent=gene-LDO45_RS33755;Dbxref=GenBank:WP_059465878.1;Name=WP_059465878.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004190112.1;locus_tag=LDO45_RS33755;product=thiol:disulfide interchange protein DsbA/DsbL;protein_id=WP_059465878.1;transl_table=11 NZ_CAJZAS010000255.1 RefSeq gene 14553 15452 . - . ID=gene-LDO45_RS33760;Name=LDO45_RS33760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33760;old_locus_tag=BDI4_950014 NZ_CAJZAS010000255.1 Protein Homology CDS 14553 15452 . - 0 ID=cds-WP_223965433.1;Parent=gene-LDO45_RS33760;Dbxref=GenBank:WP_223965433.1;Name=WP_223965433.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006750888.1;locus_tag=LDO45_RS33760;product=SPOR domain-containing protein;protein_id=WP_223965433.1;transl_table=11 NZ_CAJZAS010000255.1 RefSeq gene 15548 17329 . - . ID=gene-LDO45_RS33765;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=LDO45_RS33765;old_locus_tag=BDI4_950015 NZ_CAJZAS010000255.1 Protein Homology CDS 15548 17329 . - 0 ID=cds-WP_059523968.1;Parent=gene-LDO45_RS33765;Dbxref=GenBank:WP_059523968.1;Name=WP_059523968.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004522947.1;locus_tag=LDO45_RS33765;product=arginine--tRNA ligase;protein_id=WP_059523968.1;transl_table=11 NZ_CAJZAS010000255.1 RefSeq gene 17531 17854 . + . ID=gene-LDO45_RS33770;Name=LDO45_RS33770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33770;old_locus_tag=BDI4_950017 NZ_CAJZAS010000255.1 Protein Homology CDS 17531 17854 . + 0 ID=cds-WP_059523970.1;Parent=gene-LDO45_RS33770;Dbxref=GenBank:WP_059523970.1;Name=WP_059523970.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017334383.1;locus_tag=LDO45_RS33770;product=DUF1840 domain-containing protein;protein_id=WP_059523970.1;transl_table=11 NZ_CAJZAS010000255.1 RefSeq gene 17972 20689 . - . ID=gene-LDO45_RS33775;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=LDO45_RS33775;old_locus_tag=BDI4_950018 NZ_CAJZAS010000255.1 Protein Homology CDS 17972 20689 . - 0 ID=cds-WP_223965434.1;Parent=gene-LDO45_RS33775;Dbxref=GenBank:WP_223965434.1;Name=WP_223965434.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009918375.1;locus_tag=LDO45_RS33775;product=methionine synthase;protein_id=WP_223965434.1;transl_table=11 NZ_CAJZAS010000255.1 RefSeq gene 20736 21803 . - . ID=gene-LDO45_RS33780;Name=LDO45_RS33780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33780;old_locus_tag=BDI4_950019 NZ_CAJZAS010000255.1 Protein Homology CDS 20736 21803 . - 0 ID=cds-WP_059523975.1;Parent=gene-LDO45_RS33780;Dbxref=GenBank:WP_059523975.1;Name=WP_059523975.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658053.1;locus_tag=LDO45_RS33780;product=homocysteine S-methyltransferase family protein;protein_id=WP_059523975.1;transl_table=11 NZ_CAJZAS010000255.1 RefSeq gene 21984 22241 . - . ID=gene-LDO45_RS33785;Name=LDO45_RS33785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33785;old_locus_tag=BDI4_950020 NZ_CAJZAS010000255.1 Protein Homology CDS 21984 22241 . - 0 ID=cds-WP_006477667.1;Parent=gene-LDO45_RS33785;Dbxref=GenBank:WP_006477667.1;Name=WP_006477667.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398119.1;locus_tag=LDO45_RS33785;product=DUF3567 domain-containing protein;protein_id=WP_006477667.1;transl_table=11 NZ_CAJZAS010000255.1 RefSeq gene 22487 23737 . - . ID=gene-LDO45_RS33790;Name=LDO45_RS33790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33790;old_locus_tag=BDI4_950023 NZ_CAJZAS010000255.1 Protein Homology CDS 22487 23737 . - 0 ID=cds-WP_223965435.1;Parent=gene-LDO45_RS33790;Dbxref=GenBank:WP_223965435.1;Name=WP_223965435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886163.1;locus_tag=LDO45_RS33790;product=DUF3108 domain-containing protein;protein_id=WP_223965435.1;transl_table=11 NZ_CAJZAS010000255.1 RefSeq gene 23855 24730 . - . ID=gene-LDO45_RS33795;Name=LDO45_RS33795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33795;old_locus_tag=BDI4_950024 NZ_CAJZAS010000255.1 Protein Homology CDS 23855 24730 . - 0 ID=cds-WP_223965436.1;Parent=gene-LDO45_RS33795;Dbxref=GenBank:WP_223965436.1;Name=WP_223965436.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212625.1;locus_tag=LDO45_RS33795;product=IclR family transcriptional regulator;protein_id=WP_223965436.1;transl_table=11 NZ_CAJZAS010000255.1 RefSeq gene 24857 25849 . + . ID=gene-LDO45_RS33800;Name=LDO45_RS33800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33800;old_locus_tag=BDI4_950022 NZ_CAJZAS010000255.1 Protein Homology CDS 24857 25849 . + 0 ID=cds-WP_059523981.1;Parent=gene-LDO45_RS33800;Dbxref=GenBank:WP_059523981.1;Name=WP_059523981.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004189282.1;locus_tag=LDO45_RS33800;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_059523981.1;transl_table=11 NZ_CAJZAS010000255.1 RefSeq gene 25979 26806 . + . ID=gene-LDO45_RS33805;Name=LDO45_RS33805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33805;old_locus_tag=BDI4_950025 NZ_CAJZAS010000255.1 Protein Homology CDS 25979 26806 . + 0 ID=cds-WP_059523983.1;Parent=gene-LDO45_RS33805;Dbxref=GenBank:WP_059523983.1;Name=WP_059523983.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014895900.1;locus_tag=LDO45_RS33805;product=enoyl-CoA hydratase/isomerase family protein;protein_id=WP_059523983.1;transl_table=11 NZ_CAJZAS010000255.1 RefSeq gene 26886 27203 . + . ID=gene-LDO45_RS33810;Name=LDO45_RS33810;end_range=27203,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33810;partial=true NZ_CAJZAS010000255.1 Protein Homology CDS 26886 27203 . + 0 ID=cds-WP_374109561.1;Parent=gene-LDO45_RS33810;Dbxref=GenBank:WP_374109561.1;Name=WP_374109561.1;end_range=27203,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006407086.1;locus_tag=LDO45_RS33810;partial=true;product=PhaM family polyhydroxyalkanoate granule multifunctional regulatory protein;protein_id=WP_374109561.1;transl_table=11 ##sequence-region NZ_CAJZAS010000256.1 1 11457 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000256.1 RefSeq region 1 11457 . + . ID=NZ_CAJZAS010000256.1:1..11457;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_96 NZ_CAJZAS010000256.1 RefSeq gene 1 1648 . + . ID=gene-LDO45_RS33815;Name=LDO45_RS33815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33815;old_locus_tag=BDI4_960001;partial=true;start_range=.,1 NZ_CAJZAS010000256.1 Protein Homology CDS 1 1648 . + 1 ID=cds-WP_223965437.1;Parent=gene-LDO45_RS33815;Dbxref=GenBank:WP_223965437.1;Name=WP_223965437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006479053.1;locus_tag=LDO45_RS33815;partial=true;product=PAS domain-containing sensor histidine kinase;protein_id=WP_223965437.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000256.1 RefSeq gene 1645 2292 . + . ID=gene-LDO45_RS33820;Name=LDO45_RS33820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33820;old_locus_tag=BDI4_960002 NZ_CAJZAS010000256.1 Protein Homology CDS 1645 2292 . + 0 ID=cds-WP_059467935.1;Parent=gene-LDO45_RS33820;Dbxref=GenBank:WP_059467935.1;Name=WP_059467935.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017329510.1;locus_tag=LDO45_RS33820;product=response regulator transcription factor;protein_id=WP_059467935.1;transl_table=11 NZ_CAJZAS010000256.1 RefSeq gene 2344 2748 . - . ID=gene-LDO45_RS33825;Name=LDO45_RS33825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33825;old_locus_tag=BDI4_960003 NZ_CAJZAS010000256.1 Protein Homology CDS 2344 2748 . - 0 ID=cds-WP_223965438.1;Parent=gene-LDO45_RS33825;Dbxref=GenBank:WP_223965438.1;Name=WP_223965438.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899422.1;locus_tag=LDO45_RS33825;product=lysozyme inhibitor LprI family protein;protein_id=WP_223965438.1;transl_table=11 NZ_CAJZAS010000256.1 RefSeq gene 3019 3348 . - . ID=gene-LDO45_RS33830;Name=LDO45_RS33830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33830;old_locus_tag=BDI4_960004 NZ_CAJZAS010000256.1 Protein Homology CDS 3019 3348 . - 0 ID=cds-WP_059690049.1;Parent=gene-LDO45_RS33830;Dbxref=GenBank:WP_059690049.1;Name=WP_059690049.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011547733.1;locus_tag=LDO45_RS33830;product=DUF4148 domain-containing protein;protein_id=WP_059690049.1;transl_table=11 NZ_CAJZAS010000256.1 RefSeq gene 3576 4451 . - . ID=gene-LDO45_RS33835;Name=LDO45_RS33835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33835;old_locus_tag=BDI4_960005 NZ_CAJZAS010000256.1 Protein Homology CDS 3576 4451 . - 0 ID=cds-WP_223965439.1;Parent=gene-LDO45_RS33835;Dbxref=GenBank:WP_223965439.1;Name=WP_223965439.1;Ontology_term=GO:0035438;gbkey=CDS;go_function=cyclic-di-GMP binding|0035438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006762088.1;locus_tag=LDO45_RS33835;product=PilZ domain-containing protein;protein_id=WP_223965439.1;transl_table=11 NZ_CAJZAS010000256.1 RefSeq gene 4530 7100 . - . ID=gene-LDO45_RS33840;Name=LDO45_RS33840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33840;old_locus_tag=BDI4_960006 NZ_CAJZAS010000256.1 Protein Homology CDS 4530 7100 . - 0 ID=cds-WP_223965440.1;Parent=gene-LDO45_RS33840;Dbxref=GenBank:WP_223965440.1;Name=WP_223965440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658779.1;locus_tag=LDO45_RS33840;product=penicillin-binding protein 1A;protein_id=WP_223965440.1;transl_table=11 NZ_CAJZAS010000256.1 RefSeq gene 7299 8306 . - . ID=gene-LDO45_RS33845;Name=lhpH;gbkey=Gene;gene=lhpH;gene_biotype=protein_coding;locus_tag=LDO45_RS33845;old_locus_tag=BDI4_960007 NZ_CAJZAS010000256.1 Protein Homology CDS 7299 8306 . - 0 ID=cds-WP_223965441.1;Parent=gene-LDO45_RS33845;Dbxref=GenBank:WP_223965441.1;Name=WP_223965441.1;Ontology_term=GO:0050346;gbkey=CDS;gene=lhpH;go_function=trans-L-3-hydroxyproline dehydratase activity|0050346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006481709.1;locus_tag=LDO45_RS33845;product=trans-3-hydroxy-L-proline dehydratase;protein_id=WP_223965441.1;transl_table=11 NZ_CAJZAS010000256.1 RefSeq gene 8362 9483 . - . ID=gene-LDO45_RS33850;Name=LDO45_RS33850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33850;old_locus_tag=BDI4_960008 NZ_CAJZAS010000256.1 Protein Homology CDS 8362 9483 . - 0 ID=cds-WP_059690046.1;Parent=gene-LDO45_RS33850;Dbxref=GenBank:WP_059690046.1;Name=WP_059690046.1;Ontology_term=GO:0015803,GO:0055085,GO:0015658,GO:0022857,GO:0140359;gbkey=CDS;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA,transmembrane transporter activity|0022857||IEA,ABC-type transporter activity|0140359||IEA;go_process=branched-chain amino acid transport|0015803||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494887.1;locus_tag=LDO45_RS33850;product=branched-chain amino acid ABC transporter substrate-binding protein;protein_id=WP_059690046.1;transl_table=11 NZ_CAJZAS010000256.1 RefSeq gene 9606 10343 . - . ID=gene-LDO45_RS33855;Name=LDO45_RS33855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33855;old_locus_tag=BDI4_960009 NZ_CAJZAS010000256.1 Protein Homology CDS 9606 10343 . - 0 ID=cds-WP_223965442.1;Parent=gene-LDO45_RS33855;Dbxref=GenBank:WP_223965442.1;Name=WP_223965442.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011355264.1;locus_tag=LDO45_RS33855;product=FadR/GntR family transcriptional regulator;protein_id=WP_223965442.1;transl_table=11 NZ_CAJZAS010000256.1 RefSeq pseudogene 10610 11437 . + . ID=gene-LDO45_RS33860;Name=LDO45_RS33860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS33860;old_locus_tag=BDI4_960010;pseudo=true NZ_CAJZAS010000256.1 Protein Homology CDS 10610 11437 . + 0 ID=cds-LDO45_RS33860;Parent=gene-LDO45_RS33860;Note=too many ambiguous residues;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899432.1;locus_tag=LDO45_RS33860;product=delta(1)-pyrroline-2-carboxylate reductase family protein;pseudo=true;transl_table=11 ##sequence-region NZ_CAJZAS010000257.1 1 47623 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000257.1 RefSeq region 1 47623 . + . ID=NZ_CAJZAS010000257.1:1..47623;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_97 NZ_CAJZAS010000257.1 RefSeq gene 1 1193 . + . ID=gene-LDO45_RS33865;Name=LDO45_RS33865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33865;old_locus_tag=BDI4_970001;partial=true;start_range=.,1 NZ_CAJZAS010000257.1 Protein Homology CDS 1 1193 . + 2 ID=cds-WP_223965443.1;Parent=gene-LDO45_RS33865;Dbxref=GenBank:WP_223965443.1;Name=WP_223965443.1;Ontology_term=GO:0006631,GO:0070403;gbkey=CDS;go_function=NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006411006.1;locus_tag=LDO45_RS33865;partial=true;product=3-hydroxyacyl-CoA dehydrogenase;protein_id=WP_223965443.1;start_range=.,1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 1223 2419 . + . ID=gene-LDO45_RS33870;Name=LDO45_RS33870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33870;old_locus_tag=BDI4_970002 NZ_CAJZAS010000257.1 Protein Homology CDS 1223 2419 . + 0 ID=cds-WP_223965444.1;Parent=gene-LDO45_RS33870;Dbxref=GenBank:WP_223965444.1;Name=WP_223965444.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011851010.1;locus_tag=LDO45_RS33870;product=acyl-CoA dehydrogenase family protein;protein_id=WP_223965444.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 2434 3579 . + . ID=gene-LDO45_RS33875;Name=LDO45_RS33875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33875;old_locus_tag=BDI4_970003 NZ_CAJZAS010000257.1 Protein Homology CDS 2434 3579 . + 0 ID=cds-WP_223965445.1;Parent=gene-LDO45_RS33875;Dbxref=GenBank:WP_223965445.1;Name=WP_223965445.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364788.1;locus_tag=LDO45_RS33875;product=acyl-CoA dehydrogenase family protein;protein_id=WP_223965445.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 3610 4815 . + . ID=gene-LDO45_RS33880;Name=LDO45_RS33880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33880;old_locus_tag=BDI4_970004 NZ_CAJZAS010000257.1 Protein Homology CDS 3610 4815 . + 0 ID=cds-WP_223965446.1;Parent=gene-LDO45_RS33880;Dbxref=GenBank:WP_223965446.1;Name=WP_223965446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893194.1;locus_tag=LDO45_RS33880;product=CaiB/BaiF CoA-transferase family protein;protein_id=WP_223965446.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 4918 5223 . + . ID=gene-LDO45_RS33885;Name=LDO45_RS33885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33885;old_locus_tag=BDI4_970005 NZ_CAJZAS010000257.1 Protein Homology CDS 4918 5223 . + 0 ID=cds-WP_059524028.1;Parent=gene-LDO45_RS33885;Dbxref=GenBank:WP_059524028.1;Name=WP_059524028.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009893193.1;locus_tag=LDO45_RS33885;product=DUF485 domain-containing protein;protein_id=WP_059524028.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 5235 6926 . + . ID=gene-LDO45_RS33890;Name=actP;gbkey=Gene;gene=actP;gene_biotype=protein_coding;locus_tag=LDO45_RS33890;old_locus_tag=BDI4_970006 NZ_CAJZAS010000257.1 Protein Homology CDS 5235 6926 . + 0 ID=cds-WP_223965447.1;Parent=gene-LDO45_RS33890;Dbxref=GenBank:WP_223965447.1;Name=WP_223965447.1;gbkey=CDS;gene=actP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658022.1;locus_tag=LDO45_RS33890;product=cation/acetate symporter ActP;protein_id=WP_223965447.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 7281 8570 . + . ID=gene-LDO45_RS33895;Name=LDO45_RS33895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33895;old_locus_tag=BDI4_970008 NZ_CAJZAS010000257.1 Protein Homology CDS 7281 8570 . + 0 ID=cds-WP_059526276.1;Parent=gene-LDO45_RS33895;Dbxref=GenBank:WP_059526276.1;Name=WP_059526276.1;Ontology_term=GO:0006835,GO:0015293;gbkey=CDS;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006398167.1;locus_tag=LDO45_RS33895;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_059526276.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 8575 10584 . + . ID=gene-LDO45_RS33900;Name=LDO45_RS33900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33900;old_locus_tag=BDI4_970009 NZ_CAJZAS010000257.1 Protein Homology CDS 8575 10584 . + 0 ID=cds-WP_059526272.1;Parent=gene-LDO45_RS33900;Dbxref=GenBank:WP_059526272.1;Name=WP_059526272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006490815.1;locus_tag=LDO45_RS33900;product=ATP-binding protein;protein_id=WP_059526272.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 10653 12008 . + . ID=gene-LDO45_RS33905;Name=LDO45_RS33905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33905;old_locus_tag=BDI4_970010 NZ_CAJZAS010000257.1 Protein Homology CDS 10653 12008 . + 0 ID=cds-WP_059465914.1;Parent=gene-LDO45_RS33905;Dbxref=GenBank:WP_059465914.1;Name=WP_059465914.1;Ontology_term=GO:0006355,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004198029.1;locus_tag=LDO45_RS33905;product=sigma-54 dependent transcriptional regulator;protein_id=WP_059465914.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 12106 12642 . - . ID=gene-LDO45_RS33910;Name=LDO45_RS33910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33910;old_locus_tag=BDI4_970011 NZ_CAJZAS010000257.1 Protein Homology CDS 12106 12642 . - 0 ID=cds-WP_059526269.1;Parent=gene-LDO45_RS33910;Dbxref=GenBank:WP_059526269.1;Name=WP_059526269.1;Ontology_term=GO:0008379;gbkey=CDS;go_function=thioredoxin peroxidase activity|0008379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886124.1;locus_tag=LDO45_RS33910;product=peroxiredoxin;protein_id=WP_059526269.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 12807 13379 . + . ID=gene-LDO45_RS33915;Name=LDO45_RS33915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33915;old_locus_tag=BDI4_970012 NZ_CAJZAS010000257.1 Protein Homology CDS 12807 13379 . + 0 ID=cds-WP_223965448.1;Parent=gene-LDO45_RS33915;Dbxref=GenBank:WP_223965448.1;Name=WP_223965448.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012364781.1;locus_tag=LDO45_RS33915;product=hypothetical protein;protein_id=WP_223965448.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq pseudogene 13713 14306 . - . ID=gene-LDO45_RS33920;Name=LDO45_RS33920;end_range=14306,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS33920;old_locus_tag=BDI4_970013;partial=true;pseudo=true NZ_CAJZAS010000257.1 Protein Homology CDS 13713 14306 . - 0 ID=cds-LDO45_RS33920;Parent=gene-LDO45_RS33920;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524;end_range=14306,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012212653.1;locus_tag=LDO45_RS33920;partial=true;product=ATP-binding protein;pseudo=true;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 14636 15127 . + . ID=gene-LDO45_RS33925;Name=LDO45_RS33925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33925;old_locus_tag=BDI4_970014 NZ_CAJZAS010000257.1 GeneMarkS-2+ CDS 14636 15127 . + 0 ID=cds-WP_223965449.1;Parent=gene-LDO45_RS33925;Dbxref=GenBank:WP_223965449.1;Name=WP_223965449.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS33925;product=hypothetical protein;protein_id=WP_223965449.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 15454 16191 . - . ID=gene-LDO45_RS33930;Name=LDO45_RS33930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33930;old_locus_tag=BDI4_970015 NZ_CAJZAS010000257.1 GeneMarkS-2+ CDS 15454 16191 . - 0 ID=cds-WP_223965450.1;Parent=gene-LDO45_RS33930;Dbxref=GenBank:WP_223965450.1;Name=WP_223965450.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS33930;product=hypothetical protein;protein_id=WP_223965450.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 16245 16535 . - . ID=gene-LDO45_RS33935;Name=LDO45_RS33935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33935 NZ_CAJZAS010000257.1 GeneMarkS-2+ CDS 16245 16535 . - 0 ID=cds-WP_223965451.1;Parent=gene-LDO45_RS33935;Dbxref=GenBank:WP_223965451.1;Name=WP_223965451.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS33935;product=hypothetical protein;protein_id=WP_223965451.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 16762 17622 . + . ID=gene-LDO45_RS33940;Name=LDO45_RS33940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33940;old_locus_tag=BDI4_970016 NZ_CAJZAS010000257.1 GeneMarkS-2+ CDS 16762 17622 . + 0 ID=cds-WP_223965452.1;Parent=gene-LDO45_RS33940;Dbxref=GenBank:WP_223965452.1;Name=WP_223965452.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS33940;product=hypothetical protein;protein_id=WP_223965452.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 18587 22486 . + . ID=gene-LDO45_RS33945;Name=LDO45_RS33945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33945;old_locus_tag=BDI4_970020 NZ_CAJZAS010000257.1 Protein Homology CDS 18587 22486 . + 0 ID=cds-WP_223965453.1;Parent=gene-LDO45_RS33945;Dbxref=GenBank:WP_223965453.1;Name=WP_223965453.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024685.5;locus_tag=LDO45_RS33945;product=SIR2 family protein;protein_id=WP_223965453.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 22674 24791 . + . ID=gene-LDO45_RS33950;Name=LDO45_RS33950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33950;old_locus_tag=BDI4_970022 NZ_CAJZAS010000257.1 Protein Homology CDS 22674 24791 . + 0 ID=cds-WP_223965454.1;Parent=gene-LDO45_RS33950;Dbxref=GenBank:WP_223965454.1;Name=WP_223965454.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024928.5;locus_tag=LDO45_RS33950;product=DEAD/DEAH box helicase;protein_id=WP_223965454.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 24784 25476 . + . ID=gene-LDO45_RS33955;Name=LDO45_RS33955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33955;old_locus_tag=BDI4_970023 NZ_CAJZAS010000257.1 Protein Homology CDS 24784 25476 . + 0 ID=cds-WP_223965455.1;Parent=gene-LDO45_RS33955;Dbxref=GenBank:WP_223965455.1;Name=WP_223965455.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021564.5;locus_tag=LDO45_RS33955;product=DUF2290 domain-containing protein;protein_id=WP_223965455.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq pseudogene 25640 26876 . - . ID=gene-LDO45_RS33960;Name=LDO45_RS33960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=LDO45_RS33960;pseudo=true NZ_CAJZAS010000257.1 Protein Homology CDS 25640 26876 . - 0 ID=cds-LDO45_RS33960;Parent=gene-LDO45_RS33960;Note=frameshifted;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_086558218.1;locus_tag=LDO45_RS33960;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_CAJZAS010000257.1 cmsearch sequence_feature 26480 26596 . - . ID=id-LDO45_RS33960;Dbxref=RFAM:RF01497;Note=AL1L pseudoknot;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=LDO45_RS33960;pseudo=true NZ_CAJZAS010000257.1 RefSeq gene 27150 29684 . + . ID=gene-LDO45_RS33965;Name=LDO45_RS33965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33965;old_locus_tag=BDI4_970027 NZ_CAJZAS010000257.1 Protein Homology CDS 27150 29684 . + 0 ID=cds-WP_223965456.1;Parent=gene-LDO45_RS33965;Dbxref=GenBank:WP_223965456.1;Name=WP_223965456.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: protein motif:HMM:TIGR01646.1;locus_tag=LDO45_RS33965;product=type VI secretion system Vgr family protein;protein_id=WP_223965456.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 29684 30454 . + . ID=gene-LDO45_RS33970;Name=LDO45_RS33970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33970;old_locus_tag=BDI4_970028 NZ_CAJZAS010000257.1 GeneMarkS-2+ CDS 29684 30454 . + 0 ID=cds-WP_223965457.1;Parent=gene-LDO45_RS33970;Dbxref=GenBank:WP_223965457.1;Name=WP_223965457.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS33970;product=hypothetical protein;protein_id=WP_223965457.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 30438 31142 . + . ID=gene-LDO45_RS33975;Name=LDO45_RS33975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33975;old_locus_tag=BDI4_970029 NZ_CAJZAS010000257.1 GeneMarkS-2+ CDS 30438 31142 . + 0 ID=cds-WP_223965458.1;Parent=gene-LDO45_RS33975;Dbxref=GenBank:WP_223965458.1;Name=WP_223965458.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS33975;product=hypothetical protein;protein_id=WP_223965458.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 31269 31973 . + . ID=gene-LDO45_RS33980;Name=LDO45_RS33980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33980;old_locus_tag=BDI4_970031 NZ_CAJZAS010000257.1 GeneMarkS-2+ CDS 31269 31973 . + 0 ID=cds-WP_223965459.1;Parent=gene-LDO45_RS33980;Dbxref=GenBank:WP_223965459.1;Name=WP_223965459.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS33980;product=hypothetical protein;protein_id=WP_223965459.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 32009 33298 . + . ID=gene-LDO45_RS33985;Name=LDO45_RS33985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33985;old_locus_tag=BDI4_970032 NZ_CAJZAS010000257.1 GeneMarkS-2+ CDS 32009 33298 . + 0 ID=cds-WP_223965460.1;Parent=gene-LDO45_RS33985;Dbxref=GenBank:WP_223965460.1;Name=WP_223965460.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS33985;product=hypothetical protein;protein_id=WP_223965460.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 33295 36777 . + . ID=gene-LDO45_RS33990;Name=LDO45_RS33990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS33990;old_locus_tag=BDI4_970033 NZ_CAJZAS010000257.1 Protein Homology CDS 33295 36777 . + 0 ID=cds-WP_223965461.1;Parent=gene-LDO45_RS33990;Dbxref=GenBank:WP_223965461.1;Name=WP_223965461.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017775963.1;locus_tag=LDO45_RS33990;product=ImcF-related family protein;protein_id=WP_223965461.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 36852 38633 . + . ID=gene-LDO45_RS33995;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=LDO45_RS33995;old_locus_tag=BDI4_970034 NZ_CAJZAS010000257.1 Protein Homology CDS 36852 38633 . + 0 ID=cds-WP_290371052.1;Parent=gene-LDO45_RS33995;Dbxref=GenBank:WP_290371052.1;Name=WP_290371052.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006496884.1;locus_tag=LDO45_RS33995;product=type VI secretion system baseplate subunit TssF;protein_id=WP_290371052.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 38636 39160 . + . ID=gene-LDO45_RS34000;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=LDO45_RS34000;old_locus_tag=BDI4_970035 NZ_CAJZAS010000257.1 Protein Homology CDS 38636 39160 . + 0 ID=cds-WP_223965471.1;Parent=gene-LDO45_RS34000;Dbxref=GenBank:WP_223965471.1;Name=WP_223965471.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017775961.1;locus_tag=LDO45_RS34000;product=type VI secretion system lipoprotein TssJ;protein_id=WP_223965471.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 39227 39514 . + . ID=gene-LDO45_RS34005;Name=LDO45_RS34005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34005 NZ_CAJZAS010000257.1 Protein Homology CDS 39227 39514 . + 0 ID=cds-WP_223965462.1;Parent=gene-LDO45_RS34005;Dbxref=GenBank:WP_223965462.1;Name=WP_223965462.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017315.5;locus_tag=LDO45_RS34005;product=PAAR domain-containing protein;protein_id=WP_223965462.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 39716 41473 . + . ID=gene-LDO45_RS34010;Name=LDO45_RS34010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34010;old_locus_tag=BDI4_970036 NZ_CAJZAS010000257.1 GeneMarkS-2+ CDS 39716 41473 . + 0 ID=cds-WP_223965463.1;Parent=gene-LDO45_RS34010;Dbxref=GenBank:WP_223965463.1;Name=WP_223965463.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34010;product=hypothetical protein;protein_id=WP_223965463.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 41593 42468 . - . ID=gene-LDO45_RS34015;Name=LDO45_RS34015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34015;old_locus_tag=BDI4_970037 NZ_CAJZAS010000257.1 GeneMarkS-2+ CDS 41593 42468 . - 0 ID=cds-WP_223965464.1;Parent=gene-LDO45_RS34015;Dbxref=GenBank:WP_223965464.1;Name=WP_223965464.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34015;product=hypothetical protein;protein_id=WP_223965464.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 42740 43432 . + . ID=gene-LDO45_RS34020;Name=LDO45_RS34020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34020;old_locus_tag=BDI4_970038 NZ_CAJZAS010000257.1 GeneMarkS-2+ CDS 42740 43432 . + 0 ID=cds-WP_223965465.1;Parent=gene-LDO45_RS34020;Dbxref=GenBank:WP_223965465.1;Name=WP_223965465.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34020;product=hypothetical protein;protein_id=WP_223965465.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 43476 43787 . - . ID=gene-LDO45_RS34025;Name=LDO45_RS34025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34025;old_locus_tag=BDI4_970039 NZ_CAJZAS010000257.1 Protein Homology CDS 43476 43787 . - 0 ID=cds-WP_223965466.1;Parent=gene-LDO45_RS34025;Dbxref=GenBank:WP_223965466.1;Name=WP_223965466.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015002046.1;locus_tag=LDO45_RS34025;product=GIY-YIG nuclease family protein;protein_id=WP_223965466.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 43765 44970 . - . ID=gene-LDO45_RS34030;Name=LDO45_RS34030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34030;old_locus_tag=BDI4_970040 NZ_CAJZAS010000257.1 GeneMarkS-2+ CDS 43765 44970 . - 0 ID=cds-WP_223965467.1;Parent=gene-LDO45_RS34030;Dbxref=GenBank:WP_223965467.1;Name=WP_223965467.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=LDO45_RS34030;product=hypothetical protein;protein_id=WP_223965467.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 45575 45949 . - . ID=gene-LDO45_RS34035;Name=LDO45_RS34035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34035;old_locus_tag=BDI4_970042 NZ_CAJZAS010000257.1 Protein Homology CDS 45575 45949 . - 0 ID=cds-WP_223965468.1;Parent=gene-LDO45_RS34035;Dbxref=GenBank:WP_223965468.1;Name=WP_223965468.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024835.5;locus_tag=LDO45_RS34035;product=helix-turn-helix transcriptional regulator;protein_id=WP_223965468.1;transl_table=11 NZ_CAJZAS010000257.1 RefSeq gene 46225 47406 . - . ID=gene-LDO45_RS34040;Name=LDO45_RS34040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34040;old_locus_tag=BDI4_970045 NZ_CAJZAS010000257.1 Protein Homology CDS 46225 47406 . - 0 ID=cds-WP_223965469.1;Parent=gene-LDO45_RS34040;Dbxref=GenBank:WP_223965469.1;Name=WP_223965469.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012798.5;locus_tag=LDO45_RS34040;product=site-specific integrase;protein_id=WP_223965469.1;transl_table=11 ##sequence-region NZ_CAJZAS010000258.1 1 1448 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000258.1 RefSeq region 1 1448 . + . ID=NZ_CAJZAS010000258.1:1..1448;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_98 NZ_CAJZAS010000258.1 RefSeq gene 37 1397 . - . ID=gene-LDO45_RS34045;Name=LDO45_RS34045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34045 NZ_CAJZAS010000258.1 Protein Homology CDS 938 1397 . - 0 ID=cds-WP_223965472.1;Parent=gene-LDO45_RS34045;Dbxref=GenBank:WP_223965472.1;Name=WP_223965472.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611964.1;locus_tag=LDO45_RS34045;product=IS3 family transposase;protein_id=WP_223965472.1;transl_table=11 NZ_CAJZAS010000258.1 Protein Homology CDS 37 938 . - 2 ID=cds-WP_223965472.1;Parent=gene-LDO45_RS34045;Dbxref=GenBank:WP_223965472.1;Name=WP_223965472.1;Note=programmed frameshift;Ontology_term=GO:0004803;exception=ribosomal slippage;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611964.1;locus_tag=LDO45_RS34045;product=IS3 family transposase;protein_id=WP_223965472.1;transl_table=11 ##sequence-region NZ_CAJZAS010000259.1 1 9372 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=488732 NZ_CAJZAS010000259.1 RefSeq region 1 9372 . + . ID=NZ_CAJZAS010000259.1:1..9372;Dbxref=taxon:488732;gbkey=Src;genome=genomic;isolate=BDI447;isolation-source=Rice root associated bacteria;mol_type=genomic DNA;note=contig: BDI4_Contig_99 NZ_CAJZAS010000259.1 RefSeq gene 118 774 . - . ID=gene-LDO45_RS34050;Name=LDO45_RS34050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34050;old_locus_tag=BDI4_990001 NZ_CAJZAS010000259.1 Protein Homology CDS 118 774 . - 0 ID=cds-WP_059691270.1;Parent=gene-LDO45_RS34050;Dbxref=GenBank:WP_059691270.1;Name=WP_059691270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012366183.1;locus_tag=LDO45_RS34050;product=VC0807 family protein;protein_id=WP_059691270.1;transl_table=11 NZ_CAJZAS010000259.1 RefSeq gene 919 1983 . - . ID=gene-LDO45_RS34055;Name=LDO45_RS34055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34055;old_locus_tag=BDI4_990002 NZ_CAJZAS010000259.1 Protein Homology CDS 919 1983 . - 0 ID=cds-WP_059691269.1;Parent=gene-LDO45_RS34055;Dbxref=GenBank:WP_059691269.1;Name=WP_059691269.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658954.1;locus_tag=LDO45_RS34055;product=2%2C3-butanediol dehydrogenase;protein_id=WP_059691269.1;transl_table=11 NZ_CAJZAS010000259.1 RefSeq gene 2465 2947 . + . ID=gene-LDO45_RS34060;Name=LDO45_RS34060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34060;old_locus_tag=BDI4_990003 NZ_CAJZAS010000259.1 Protein Homology CDS 2465 2947 . + 0 ID=cds-WP_223965478.1;Parent=gene-LDO45_RS34060;Dbxref=GenBank:WP_223965478.1;Name=WP_223965478.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006755714.1;locus_tag=LDO45_RS34060;product=DUF3331 domain-containing protein;protein_id=WP_223965478.1;transl_table=11 NZ_CAJZAS010000259.1 RefSeq gene 2971 4170 . - . ID=gene-LDO45_RS34065;Name=LDO45_RS34065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34065;old_locus_tag=BDI4_990005 NZ_CAJZAS010000259.1 Protein Homology CDS 2971 4170 . - 0 ID=cds-WP_223965473.1;Parent=gene-LDO45_RS34065;Dbxref=GenBank:WP_223965473.1;Name=WP_223965473.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006413306.1;locus_tag=LDO45_RS34065;product=GNAT family N-acetyltransferase;protein_id=WP_223965473.1;transl_table=11 NZ_CAJZAS010000259.1 RefSeq gene 4332 5804 . + . ID=gene-LDO45_RS34070;Name=LDO45_RS34070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34070;old_locus_tag=BDI4_990006 NZ_CAJZAS010000259.1 Protein Homology CDS 4332 5804 . + 0 ID=cds-WP_223965474.1;Parent=gene-LDO45_RS34070;Dbxref=GenBank:WP_223965474.1;Name=WP_223965474.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014899100.1;locus_tag=LDO45_RS34070;product=PLP-dependent aminotransferase family protein;protein_id=WP_223965474.1;transl_table=11 NZ_CAJZAS010000259.1 RefSeq gene 5834 7087 . - . ID=gene-LDO45_RS34075;Name=LDO45_RS34075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34075;old_locus_tag=BDI4_990007 NZ_CAJZAS010000259.1 Protein Homology CDS 5834 7087 . - 0 ID=cds-WP_223965475.1;Parent=gene-LDO45_RS34075;Dbxref=GenBank:WP_223965475.1;Name=WP_223965475.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658950.1;locus_tag=LDO45_RS34075;product=MFS transporter;protein_id=WP_223965475.1;transl_table=11 NZ_CAJZAS010000259.1 RefSeq gene 7221 8096 . + . ID=gene-LDO45_RS34080;Name=LDO45_RS34080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34080;old_locus_tag=BDI4_990008 NZ_CAJZAS010000259.1 Protein Homology CDS 7221 8096 . + 0 ID=cds-WP_223965476.1;Parent=gene-LDO45_RS34080;Dbxref=GenBank:WP_223965476.1;Name=WP_223965476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011658949.1;locus_tag=LDO45_RS34080;product=LysR family transcriptional regulator;protein_id=WP_223965476.1;transl_table=11 NZ_CAJZAS010000259.1 RefSeq gene 8332 9372 . + . ID=gene-LDO45_RS34085;Name=LDO45_RS34085;end_range=9372,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=LDO45_RS34085;partial=true NZ_CAJZAS010000259.1 Protein Homology CDS 8332 9372 . + 0 ID=cds-WP_223965477.1;Parent=gene-LDO45_RS34085;Dbxref=GenBank:WP_223965477.1;Name=WP_223965477.1;Ontology_term=GO:0004252;end_range=9372,.;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006494069.1;locus_tag=LDO45_RS34085;partial=true;product=S1C family serine protease;protein_id=WP_223965477.1;transl_table=11 ###