##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM5774769v1 #!genome-build-accession NCBI_Assembly:GCA_057747695.1 #!annotation-date 05/20/2026 16:59:31 #!annotation-source NCBI ##sequence-region JBYLIA010000001.1 1 1246308 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=3712069 JBYLIA010000001.1 Genbank region 1 1246308 . + . ID=JBYLIA010000001.1:1..1246308;Dbxref=taxon:3712069;collection-date=2022-04-09;country=Morocco: Oued Chbika;environmental-sample=true;gbkey=Src;isolate=PM03H;isolation-source=Testudo graeca;lat-lon=28.44088381 N 11.36657734 W;metagenome-source=tick metagenome;metagenomic=true;mol_type=genomic DNA;nat-host=Hyalomma aegyptium JBYLIA010000001.1 Genbank gene 1 875 . - . ID=gene-AC3ASX_00005;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=AC3ASX_00005;partial=true;start_range=.,1 JBYLIA010000001.1 Protein Homology CDS 1 875 . - 0 ID=cds-MHV1764144.1;Parent=gene-AC3ASX_00005;Dbxref=NCBI_GP:MHV1764144.1;Name=MHV1764144.1;Ontology_term=GO:0009231,GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017616.1;locus_tag=AC3ASX_00005;partial=true;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=MHV1764144.1;start_range=.,1;transl_table=11 JBYLIA010000001.1 Genbank gene 868 1473 . - . ID=gene-AC3ASX_00010;Name=AC3ASX_00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00010 JBYLIA010000001.1 Protein Homology CDS 868 1473 . - 0 ID=cds-MHV1764145.1;Parent=gene-AC3ASX_00010;Dbxref=NCBI_GP:MHV1764145.1;Name=MHV1764145.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547434.1;locus_tag=AC3ASX_00010;product=riboflavin synthase;protein_id=MHV1764145.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1466 2533 . - . ID=gene-AC3ASX_00015;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=AC3ASX_00015 JBYLIA010000001.1 Protein Homology CDS 1466 2533 . - 0 ID=cds-MHV1764146.1;Parent=gene-AC3ASX_00015;Dbxref=NCBI_GP:MHV1764146.1;Name=MHV1764146.1;Ontology_term=GO:0009231,GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549203.1;locus_tag=AC3ASX_00015;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=MHV1764146.1;transl_table=11 JBYLIA010000001.1 cmsearch riboswitch 2653 2800 . - . ID=id-JBYLIA010000001.1:2653..2800;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch JBYLIA010000001.1 Genbank pseudogene 3347 4462 . - . ID=gene-AC3ASX_00020;Name=AC3ASX_00020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00020;pseudo=true JBYLIA010000001.1 Protein Homology CDS 3347 4462 . - 0 ID=cds-AC3ASX_00020;Parent=gene-AC3ASX_00020;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003824,GO:0030976;gbkey=CDS;go_function=catalytic activity|0003824||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003042825.1;locus_tag=AC3ASX_00020;product=thiamine pyrophosphate-dependent enzyme;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 5121 6044 . + . ID=gene-AC3ASX_00025;Name=AC3ASX_00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00025 JBYLIA010000001.1 Protein Homology CDS 5121 6044 . + 0 ID=cds-MHV1764147.1;Parent=gene-AC3ASX_00025;Dbxref=NCBI_GP:MHV1764147.1;Name=MHV1764147.1;Ontology_term=GO:0006508,GO:0051604,GO:0008236,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022733.1;locus_tag=AC3ASX_00025;product=S49 family peptidase;protein_id=MHV1764147.1;transl_table=11 JBYLIA010000001.1 Genbank gene 6133 6672 . + . ID=gene-AC3ASX_00030;Name=AC3ASX_00030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00030 JBYLIA010000001.1 Protein Homology CDS 6133 6672 . + 0 ID=cds-MHV1764148.1;Parent=gene-AC3ASX_00030;Dbxref=NCBI_GP:MHV1764148.1;Name=MHV1764148.1;Ontology_term=GO:0006457,GO:0051082,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003029937.1;locus_tag=AC3ASX_00030;product=OmpH/Skp family outer membrane protein;protein_id=MHV1764148.1;transl_table=11 JBYLIA010000001.1 Genbank gene 6809 7231 . + . ID=gene-AC3ASX_00035;Name=AC3ASX_00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00035 JBYLIA010000001.1 Protein Homology CDS 6809 7231 . + 0 ID=cds-MHV1764149.1;Parent=gene-AC3ASX_00035;Dbxref=NCBI_GP:MHV1764149.1;Name=MHV1764149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549206.1;locus_tag=AC3ASX_00035;product=rhodanese-like domain-containing protein;protein_id=MHV1764149.1;transl_table=11 JBYLIA010000001.1 Genbank gene 7263 7712 . + . ID=gene-AC3ASX_00040;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=AC3ASX_00040 JBYLIA010000001.1 Protein Homology CDS 7263 7712 . + 0 ID=cds-MHV1764150.1;Parent=gene-AC3ASX_00040;Dbxref=NCBI_GP:MHV1764150.1;Name=MHV1764150.1;Ontology_term=GO:0015031,GO:0051262,GO:0051082;gbkey=CDS;gene=secB;go_function=unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,protein tetramerization|0051262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017555.1;locus_tag=AC3ASX_00040;product=protein-export chaperone SecB;protein_id=MHV1764150.1;transl_table=11 JBYLIA010000001.1 Genbank gene 7736 8815 . + . ID=gene-AC3ASX_00045;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=AC3ASX_00045 JBYLIA010000001.1 Protein Homology CDS 7736 8815 . + 0 ID=cds-MHV1764151.1;Parent=gene-AC3ASX_00045;Dbxref=NCBI_GP:MHV1764151.1;Name=MHV1764151.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286733.1;locus_tag=AC3ASX_00045;product=recombinase RecA;protein_id=MHV1764151.1;transl_table=11 JBYLIA010000001.1 Genbank gene 8802 9254 . + . ID=gene-AC3ASX_00050;Name=AC3ASX_00050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00050 JBYLIA010000001.1 Protein Homology CDS 8802 9254 . + 0 ID=cds-MHV1764152.1;Parent=gene-AC3ASX_00050;Dbxref=NCBI_GP:MHV1764152.1;Name=MHV1764152.1;Ontology_term=GO:0006282;gbkey=CDS;go_process=regulation of DNA repair|0006282||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017557.1;locus_tag=AC3ASX_00050;product=regulatory protein RecX;protein_id=MHV1764152.1;transl_table=11 JBYLIA010000001.1 Genbank gene 9427 9873 . + . ID=gene-AC3ASX_00055;Name=AC3ASX_00055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00055 JBYLIA010000001.1 Protein Homology CDS 9427 9873 . + 0 ID=cds-MHV1764153.1;Parent=gene-AC3ASX_00055;Dbxref=NCBI_GP:MHV1764153.1;Name=MHV1764153.1;Ontology_term=GO:0006260,GO:0003697;gbkey=CDS;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017559.1;locus_tag=AC3ASX_00055;product=single-stranded DNA-binding protein;protein_id=MHV1764153.1;transl_table=11 JBYLIA010000001.1 Genbank gene 9978 11132 . + . ID=gene-AC3ASX_00060;Name=AC3ASX_00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00060 JBYLIA010000001.1 Protein Homology CDS 9978 11132 . + 0 ID=cds-MHV1764154.1;Parent=gene-AC3ASX_00060;Dbxref=NCBI_GP:MHV1764154.1;Name=MHV1764154.1;Ontology_term=GO:0006082,GO:0016310,GO:0000287,GO:0005524,GO:0016301,GO:0016774;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C carboxyl group as acceptor|0016774||IEA;go_process=organic acid metabolic process|0006082||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003032784.1;locus_tag=AC3ASX_00060;product=acetate/propionate family kinase;protein_id=MHV1764154.1;transl_table=11 JBYLIA010000001.1 Genbank gene 11142 13238 . + . ID=gene-AC3ASX_00065;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=AC3ASX_00065 JBYLIA010000001.1 Protein Homology CDS 11142 13238 . + 0 ID=cds-MHV1764155.1;Parent=gene-AC3ASX_00065;Dbxref=NCBI_GP:MHV1764155.1;Name=MHV1764155.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017563.1;locus_tag=AC3ASX_00065;product=phosphate acetyltransferase;protein_id=MHV1764155.1;transl_table=11 JBYLIA010000001.1 Genbank gene 13253 14686 . + . ID=gene-AC3ASX_00070;Name=AC3ASX_00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00070 JBYLIA010000001.1 Protein Homology CDS 13253 14686 . + 0 ID=cds-MHV1764156.1;Parent=gene-AC3ASX_00070;Dbxref=NCBI_GP:MHV1764156.1;Name=MHV1764156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038194.1;locus_tag=AC3ASX_00070;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=MHV1764156.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 14842 15074 . + . ID=gene-AC3ASX_00075;Name=AC3ASX_00075;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00075;pseudo=true JBYLIA010000001.1 Protein Homology CDS 14842 15074 . + 0 ID=cds-AC3ASX_00075;Parent=gene-AC3ASX_00075;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547450.1;locus_tag=AC3ASX_00075;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 15251 17023 . + . ID=gene-AC3ASX_00080;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=AC3ASX_00080 JBYLIA010000001.1 Protein Homology CDS 15251 17023 . + 0 ID=cds-MHV1764157.1;Parent=gene-AC3ASX_00080;Dbxref=NCBI_GP:MHV1764157.1;Name=MHV1764157.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003042806.1;locus_tag=AC3ASX_00080;product=aspartate--tRNA ligase;protein_id=MHV1764157.1;transl_table=11 JBYLIA010000001.1 Genbank gene 17034 17183 . - . ID=gene-AC3ASX_00085;Name=AC3ASX_00085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00085 JBYLIA010000001.1 GeneMarkS-2+ CDS 17034 17183 . - 0 ID=cds-MHV1764158.1;Parent=gene-AC3ASX_00085;Dbxref=NCBI_GP:MHV1764158.1;Name=MHV1764158.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_00085;product=hypothetical protein;protein_id=MHV1764158.1;transl_table=11 JBYLIA010000001.1 Genbank gene 17389 17532 . - . ID=gene-AC3ASX_00090;Name=AC3ASX_00090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00090 JBYLIA010000001.1 Protein Homology CDS 17389 17532 . - 0 ID=cds-MHV1764159.1;Parent=gene-AC3ASX_00090;Dbxref=NCBI_GP:MHV1764159.1;Name=MHV1764159.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016377.7;locus_tag=AC3ASX_00090;product=glycosyltransferase;protein_id=MHV1764159.1;transl_table=11 JBYLIA010000001.1 Genbank gene 17852 19726 . + . ID=gene-AC3ASX_00095;Name=AC3ASX_00095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00095 JBYLIA010000001.1 Protein Homology CDS 17852 19726 . + 0 ID=cds-MHV1764160.1;Parent=gene-AC3ASX_00095;Dbxref=NCBI_GP:MHV1764160.1;Name=MHV1764160.1;Ontology_term=GO:0006401,GO:0003723,GO:0016896;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013921915.1;locus_tag=AC3ASX_00095;product=ribonuclease catalytic domain-containing protein;protein_id=MHV1764160.1;transl_table=11 JBYLIA010000001.1 Genbank gene 20053 20721 . + . ID=gene-AC3ASX_00100;Name=AC3ASX_00100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00100 JBYLIA010000001.1 Protein Homology CDS 20053 20721 . + 0 ID=cds-MHV1764161.1;Parent=gene-AC3ASX_00100;Dbxref=NCBI_GP:MHV1764161.1;Name=MHV1764161.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714228.1;locus_tag=AC3ASX_00100;product=alpha/beta fold hydrolase;protein_id=MHV1764161.1;transl_table=11 JBYLIA010000001.1 Genbank gene 20718 21620 . + . ID=gene-AC3ASX_00105;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=AC3ASX_00105 JBYLIA010000001.1 Protein Homology CDS 20718 21620 . + 0 ID=cds-MHV1764162.1;Parent=gene-AC3ASX_00105;Dbxref=NCBI_GP:MHV1764162.1;Name=MHV1764162.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003041055.1;locus_tag=AC3ASX_00105;product=hydroxymethylbilane synthase;protein_id=MHV1764162.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 21621 21843 . + . ID=gene-AC3ASX_00110;Name=AC3ASX_00110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00110;pseudo=true JBYLIA010000001.1 Protein Homology CDS 21621 21843 . + 0 ID=cds-AC3ASX_00110;Parent=gene-AC3ASX_00110;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013921918.1;locus_tag=AC3ASX_00110;product=CrcB family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 21850 22181 . + . ID=gene-AC3ASX_00115;Name=AC3ASX_00115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00115;pseudo=true JBYLIA010000001.1 Protein Homology CDS 21850 22181 . + 0 ID=cds-AC3ASX_00115;Parent=gene-AC3ASX_00115;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549220.1;locus_tag=AC3ASX_00115;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 22386 22622 . + . ID=gene-AC3ASX_00120;Name=AC3ASX_00120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00120;pseudo=true JBYLIA010000001.1 Protein Homology CDS 22386 22622 . + 0 ID=cds-AC3ASX_00120;Parent=gene-AC3ASX_00120;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038209.1;locus_tag=AC3ASX_00120;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 22700 22873 . - . ID=gene-AC3ASX_00125;Name=AC3ASX_00125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00125 JBYLIA010000001.1 Protein Homology CDS 22700 22873 . - 0 ID=cds-MHV1764163.1;Parent=gene-AC3ASX_00125;Dbxref=NCBI_GP:MHV1764163.1;Name=MHV1764163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429853.1;locus_tag=AC3ASX_00125;product=zinc-finger domain-containing protein;protein_id=MHV1764163.1;transl_table=11 JBYLIA010000001.1 Genbank gene 23015 24814 . + . ID=gene-AC3ASX_00130;Name=AC3ASX_00130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00130 JBYLIA010000001.1 Protein Homology CDS 23015 24814 . + 0 ID=cds-MHV1764164.1;Parent=gene-AC3ASX_00130;Dbxref=NCBI_GP:MHV1764164.1;Name=MHV1764164.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003032803.1;locus_tag=AC3ASX_00130;product=ABC transporter permease;protein_id=MHV1764164.1;transl_table=11 JBYLIA010000001.1 Genbank gene 24833 26149 . + . ID=gene-AC3ASX_00135;Name=AC3ASX_00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00135 JBYLIA010000001.1 Protein Homology CDS 24833 26149 . + 0 ID=cds-MHV1764165.1;Parent=gene-AC3ASX_00135;Dbxref=NCBI_GP:MHV1764165.1;Name=MHV1764165.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003023132.1;locus_tag=AC3ASX_00135;product=ABC transporter ATP-binding protein;protein_id=MHV1764165.1;transl_table=11 JBYLIA010000001.1 Genbank gene 26580 27104 . + . ID=gene-AC3ASX_00140;Name=AC3ASX_00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00140 JBYLIA010000001.1 Protein Homology CDS 26580 27104 . + 0 ID=cds-MHV1764166.1;Parent=gene-AC3ASX_00140;Dbxref=NCBI_GP:MHV1764166.1;Name=MHV1764166.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023519.7;locus_tag=AC3ASX_00140;product=DUF3573 domain-containing protein;protein_id=MHV1764166.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 27159 27434 . + . ID=gene-AC3ASX_00145;Name=AC3ASX_00145;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00145;pseudo=true JBYLIA010000001.1 Protein Homology CDS 27159 27434 . + 0 ID=cds-AC3ASX_00145;Parent=gene-AC3ASX_00145;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023519.7;locus_tag=AC3ASX_00145;product=DUF3573 domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 27609 27797 . + . ID=gene-AC3ASX_00150;Name=AC3ASX_00150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00150 JBYLIA010000001.1 GeneMarkS-2+ CDS 27609 27797 . + 0 ID=cds-MHV1764167.1;Parent=gene-AC3ASX_00150;Dbxref=NCBI_GP:MHV1764167.1;Name=MHV1764167.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_00150;product=hypothetical protein;protein_id=MHV1764167.1;transl_table=11 JBYLIA010000001.1 Genbank gene 27890 29782 . + . ID=gene-AC3ASX_00155;Name=AC3ASX_00155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00155 JBYLIA010000001.1 Protein Homology CDS 27890 29782 . + 0 ID=cds-MHV1764168.1;Parent=gene-AC3ASX_00155;Dbxref=NCBI_GP:MHV1764168.1;Name=MHV1764168.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014132.1;locus_tag=AC3ASX_00155;product=cation:proton antiporter;protein_id=MHV1764168.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 29767 30302 . + . ID=gene-AC3ASX_00160;Name=AC3ASX_00160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00160;pseudo=true JBYLIA010000001.1 Protein Homology CDS 29767 30302 . + 0 ID=cds-AC3ASX_00160;Parent=gene-AC3ASX_00160;Note=frameshifted%3B internal stop;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003032809.1;locus_tag=AC3ASX_00160;product=gamma carbonic anhydrase family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 30253 30894 . + . ID=gene-AC3ASX_00165;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=AC3ASX_00165 JBYLIA010000001.1 Protein Homology CDS 30253 30894 . + 0 ID=cds-MHV1764169.1;Parent=gene-AC3ASX_00165;Dbxref=NCBI_GP:MHV1764169.1;Name=MHV1764169.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003027300.1;locus_tag=AC3ASX_00165;product=lipoprotein insertase outer membrane protein LolB;protein_id=MHV1764169.1;transl_table=11 JBYLIA010000001.1 Genbank gene 30882 31709 . + . ID=gene-AC3ASX_00170;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=AC3ASX_00170 JBYLIA010000001.1 Protein Homology CDS 30882 31709 . + 0 ID=cds-MHV1764170.1;Parent=gene-AC3ASX_00170;Dbxref=NCBI_GP:MHV1764170.1;Name=MHV1764170.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021712.1;locus_tag=AC3ASX_00170;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=MHV1764170.1;transl_table=11 JBYLIA010000001.1 Genbank gene 31728 31802 . + . ID=gene-AC3ASX_00175;Name=AC3ASX_00175;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_00175 JBYLIA010000001.1 tRNAscan-SE tRNA 31728 31802 . + . ID=rna-AC3ASX_00175;Parent=gene-AC3ASX_00175;anticodon=(pos:31760..31762);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_00175;product=tRNA-Gln JBYLIA010000001.1 tRNAscan-SE exon 31728 31802 . + . ID=exon-AC3ASX_00175-1;Parent=rna-AC3ASX_00175;anticodon=(pos:31760..31762);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_00175;product=tRNA-Gln JBYLIA010000001.1 Genbank gene 32115 32378 . + . ID=gene-AC3ASX_00180;Name=AC3ASX_00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00180 JBYLIA010000001.1 GeneMarkS-2+ CDS 32115 32378 . + 0 ID=cds-MHV1764171.1;Parent=gene-AC3ASX_00180;Dbxref=NCBI_GP:MHV1764171.1;Name=MHV1764171.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_00180;product=hypothetical protein;protein_id=MHV1764171.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 32502 33316 . + . ID=gene-AC3ASX_00185;Name=AC3ASX_00185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00185;pseudo=true JBYLIA010000001.1 Protein Homology CDS 32502 33316 . + 0 ID=cds-AC3ASX_00185;Parent=gene-AC3ASX_00185;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547470.1;locus_tag=AC3ASX_00185;product=M14 family metallopeptidase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 33310 33879 . + . ID=gene-AC3ASX_00190;Name=AC3ASX_00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00190 JBYLIA010000001.1 Protein Homology CDS 33310 33879 . + 0 ID=cds-MHV1764172.1;Parent=gene-AC3ASX_00190;Dbxref=NCBI_GP:MHV1764172.1;Name=MHV1764172.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714242.1;locus_tag=AC3ASX_00190;product=YggT family protein;protein_id=MHV1764172.1;transl_table=11 JBYLIA010000001.1 Genbank gene 33890 34156 . + . ID=gene-AC3ASX_00195;Name=AC3ASX_00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00195 JBYLIA010000001.1 Protein Homology CDS 33890 34156 . + 0 ID=cds-MHV1764173.1;Parent=gene-AC3ASX_00195;Dbxref=NCBI_GP:MHV1764173.1;Name=MHV1764173.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014633.7;locus_tag=AC3ASX_00195;product=DUF167 domain-containing protein;protein_id=MHV1764173.1;transl_table=11 JBYLIA010000001.1 Genbank gene 34995 35246 . + . ID=gene-AC3ASX_00200;Name=AC3ASX_00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00200 JBYLIA010000001.1 GeneMarkS-2+ CDS 34995 35246 . + 0 ID=cds-MHV1764174.1;Parent=gene-AC3ASX_00200;Dbxref=NCBI_GP:MHV1764174.1;Name=MHV1764174.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_00200;product=hypothetical protein;protein_id=MHV1764174.1;transl_table=11 JBYLIA010000001.1 Genbank gene 35458 35652 . - . ID=gene-AC3ASX_00205;Name=AC3ASX_00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00205 JBYLIA010000001.1 GeneMarkS-2+ CDS 35458 35652 . - 0 ID=cds-MHV1764175.1;Parent=gene-AC3ASX_00205;Dbxref=NCBI_GP:MHV1764175.1;Name=MHV1764175.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_00205;product=hypothetical protein;protein_id=MHV1764175.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 36280 37704 . - . ID=gene-AC3ASX_00210;Name=AC3ASX_00210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00210;pseudo=true JBYLIA010000001.1 Protein Homology CDS 36280 37704 . - 0 ID=cds-AC3ASX_00210;Parent=gene-AC3ASX_00210;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547474.1;locus_tag=AC3ASX_00210;product=RimK family ATP-grasp domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 37806 39746 . + . ID=gene-AC3ASX_00215;Name=AC3ASX_00215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00215;pseudo=true JBYLIA010000001.1 Protein Homology CDS 37806 39746 . + 0 ID=cds-AC3ASX_00215;Parent=gene-AC3ASX_00215;Note=frameshifted%3B internal stop;Ontology_term=GO:0030420,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286701.1;locus_tag=AC3ASX_00215;product=ComEC/Rec2 family competence protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 39906 40802 . + . ID=gene-AC3ASX_00220;Name=yihG;gbkey=Gene;gene=yihG;gene_biotype=protein_coding;locus_tag=AC3ASX_00220 JBYLIA010000001.1 Protein Homology CDS 39906 40802 . + 0 ID=cds-MHV1764176.1;Parent=gene-AC3ASX_00220;Dbxref=NCBI_GP:MHV1764176.1;Name=MHV1764176.1;gbkey=CDS;gene=yihG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003027437.1;locus_tag=AC3ASX_00220;product=1-acylglycerol-3-phosphate O-acyltransferase%2C YihG family;protein_id=MHV1764176.1;transl_table=11 JBYLIA010000001.1 Genbank gene 41252 41788 . - . ID=gene-AC3ASX_00225;Name=AC3ASX_00225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00225 JBYLIA010000001.1 Protein Homology CDS 41252 41788 . - 0 ID=cds-MHV1764177.1;Parent=gene-AC3ASX_00225;Dbxref=NCBI_GP:MHV1764177.1;Name=MHV1764177.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003013806.1;locus_tag=AC3ASX_00225;product=intracellular proliferation membrane protein RipA;protein_id=MHV1764177.1;transl_table=11 JBYLIA010000001.1 Genbank gene 41882 42424 . - . ID=gene-AC3ASX_00230;Name=AC3ASX_00230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00230 JBYLIA010000001.1 Protein Homology CDS 41882 42424 . - 0 ID=cds-MHV1764178.1;Parent=gene-AC3ASX_00230;Dbxref=NCBI_GP:MHV1764178.1;Name=MHV1764178.1;Ontology_term=GO:0000166,GO:0003725,GO:0005524,GO:0061710;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA,L-threonylcarbamoyladenylate synthase activity|0061710||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019986.1;locus_tag=AC3ASX_00230;product=L-threonylcarbamoyladenylate synthase;protein_id=MHV1764178.1;transl_table=11 JBYLIA010000001.1 Genbank gene 42547 44217 . - . ID=gene-AC3ASX_00235;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=AC3ASX_00235 JBYLIA010000001.1 Protein Homology CDS 42547 44217 . - 0 ID=cds-MHV1764179.1;Parent=gene-AC3ASX_00235;Dbxref=NCBI_GP:MHV1764179.1;Name=MHV1764179.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003027429.1;locus_tag=AC3ASX_00235;product=30S ribosomal protein S1;protein_id=MHV1764179.1;transl_table=11 JBYLIA010000001.1 Genbank gene 44367 44828 . + . ID=gene-AC3ASX_00240;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=AC3ASX_00240 JBYLIA010000001.1 Protein Homology CDS 44367 44828 . + 0 ID=cds-MHV1764180.1;Parent=gene-AC3ASX_00240;Dbxref=NCBI_GP:MHV1764180.1;Name=MHV1764180.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286696.1;locus_tag=AC3ASX_00240;product=tRNA adenosine(34) deaminase TadA;protein_id=MHV1764180.1;transl_table=11 JBYLIA010000001.1 Genbank gene 44832 45722 . + . ID=gene-AC3ASX_00245;Name=AC3ASX_00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00245 JBYLIA010000001.1 Protein Homology CDS 44832 45722 . + 0 ID=cds-MHV1764181.1;Parent=gene-AC3ASX_00245;Dbxref=NCBI_GP:MHV1764181.1;Name=MHV1764181.1;Ontology_term=GO:0005524,GO:0008716,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,D-alanine-D-alanine ligase activity|0008716||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003027426.1;locus_tag=AC3ASX_00245;product=D-alanine--D-alanine ligase;protein_id=MHV1764181.1;transl_table=11 JBYLIA010000001.1 Genbank gene 45719 46402 . + . ID=gene-AC3ASX_00250;Name=AC3ASX_00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00250 JBYLIA010000001.1 Protein Homology CDS 45719 46402 . + 0 ID=cds-MHV1764182.1;Parent=gene-AC3ASX_00250;Dbxref=NCBI_GP:MHV1764182.1;Name=MHV1764182.1;Ontology_term=GO:0043093,GO:0051301;gbkey=CDS;go_process=FtsZ-dependent cytokinesis|0043093||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549240.1;locus_tag=AC3ASX_00250;product=cell division protein FtsQ/DivIB;protein_id=MHV1764182.1;transl_table=11 JBYLIA010000001.1 Genbank gene 46504 47766 . + . ID=gene-AC3ASX_00255;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=AC3ASX_00255 JBYLIA010000001.1 Protein Homology CDS 46504 47766 . + 0 ID=cds-MHV1764183.1;Parent=gene-AC3ASX_00255;Dbxref=NCBI_GP:MHV1764183.1;Name=MHV1764183.1;Ontology_term=GO:0043093,GO:0005515,GO:0005524;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714254.1;locus_tag=AC3ASX_00255;product=cell division protein FtsA;protein_id=MHV1764183.1;transl_table=11 JBYLIA010000001.1 Genbank gene 47811 48956 . + . ID=gene-AC3ASX_00260;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=AC3ASX_00260 JBYLIA010000001.1 Protein Homology CDS 47811 48956 . + 0 ID=cds-MHV1764184.1;Parent=gene-AC3ASX_00260;Dbxref=NCBI_GP:MHV1764184.1;Name=MHV1764184.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017491.1;locus_tag=AC3ASX_00260;product=cell division protein FtsZ;protein_id=MHV1764184.1;transl_table=11 JBYLIA010000001.1 Genbank gene 48980 49840 . + . ID=gene-AC3ASX_00265;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=AC3ASX_00265 JBYLIA010000001.1 Protein Homology CDS 48980 49840 . + 0 ID=cds-MHV1764185.1;Parent=gene-AC3ASX_00265;Dbxref=NCBI_GP:MHV1764185.1;Name=MHV1764185.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017478.1;locus_tag=AC3ASX_00265;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=MHV1764185.1;transl_table=11 JBYLIA010000001.1 Genbank gene 49854 51494 . - . ID=gene-AC3ASX_00270;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=AC3ASX_00270 JBYLIA010000001.1 Protein Homology CDS 49854 51494 . - 0 ID=cds-MHV1764186.1;Parent=gene-AC3ASX_00270;Dbxref=NCBI_GP:MHV1764186.1;Name=MHV1764186.1;Ontology_term=GO:0006260,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: protein motif:HMM:NF011518.0;locus_tag=AC3ASX_00270;product=DNA polymerase III subunit gamma/tau;protein_id=MHV1764186.1;transl_table=11 JBYLIA010000001.1 Genbank gene 51654 52756 . + . ID=gene-AC3ASX_00275;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=AC3ASX_00275 JBYLIA010000001.1 Protein Homology CDS 51654 51722 . + 0 ID=cds-MHV1764187.1;Parent=gene-AC3ASX_00275;Dbxref=NCBI_GP:MHV1764187.1;Name=MHV1764187.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_156860365.1;locus_tag=AC3ASX_00275;product=peptide chain release factor 2;protein_id=MHV1764187.1;transl_table=11 JBYLIA010000001.1 Protein Homology CDS 51725 52756 . + 0 ID=cds-MHV1764187.1;Parent=gene-AC3ASX_00275;Dbxref=NCBI_GP:MHV1764187.1;Name=MHV1764187.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_156860365.1;locus_tag=AC3ASX_00275;product=peptide chain release factor 2;protein_id=MHV1764187.1;transl_table=11 JBYLIA010000001.1 Genbank gene 52927 54609 . + . ID=gene-AC3ASX_00280;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=AC3ASX_00280 JBYLIA010000001.1 Protein Homology CDS 52927 54609 . + 0 ID=cds-MHV1764188.1;Parent=gene-AC3ASX_00280;Dbxref=NCBI_GP:MHV1764188.1;Name=MHV1764188.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014551163.1;locus_tag=AC3ASX_00280;product=lysine--tRNA ligase;protein_id=MHV1764188.1;transl_table=11 JBYLIA010000001.1 Genbank gene 54615 54794 . + . ID=gene-AC3ASX_00285;Name=AC3ASX_00285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00285 JBYLIA010000001.1 Protein Homology CDS 54615 54794 . + 0 ID=cds-MHV1764189.1;Parent=gene-AC3ASX_00285;Dbxref=NCBI_GP:MHV1764189.1;Name=MHV1764189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015083900.1;locus_tag=AC3ASX_00285;product=hypothetical protein;protein_id=MHV1764189.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 55433 55973 . - . ID=gene-AC3ASX_00290;Name=AC3ASX_00290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00290;pseudo=true JBYLIA010000001.1 Protein Homology CDS 55433 55973 . - 0 ID=cds-AC3ASX_00290;Parent=gene-AC3ASX_00290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017470.1;locus_tag=AC3ASX_00290;product=TIGR00645 family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 56057 56946 . - . ID=gene-AC3ASX_00295;Name=AC3ASX_00295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00295;pseudo=true JBYLIA010000001.1 Protein Homology CDS 56057 56946 . - 0 ID=cds-AC3ASX_00295;Parent=gene-AC3ASX_00295;Note=frameshifted%3B internal stop;Ontology_term=GO:0071586,GO:0004222,GO:0070007,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,obsolete glutamic-type endopeptidase activity|0070007||IEA;go_process=CAAX-box protein processing|0071586||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549246.1;locus_tag=AC3ASX_00295;product=CPBP family intramembrane glutamic endopeptidase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 56951 58141 . - . ID=gene-AC3ASX_00300;Name=AC3ASX_00300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00300;pseudo=true JBYLIA010000001.1 Protein Homology CDS 56951 58141 . - 0 ID=cds-AC3ASX_00300;Parent=gene-AC3ASX_00300;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;go_function=glutaminase activity|0004359||IEA;go_process=L-glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010031875.1;locus_tag=AC3ASX_00300;product=glutaminase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 58210 59247 . - . ID=gene-AC3ASX_00305;Name=AC3ASX_00305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00305;pseudo=true JBYLIA010000001.1 Protein Homology CDS 58210 59247 . - 0 ID=cds-AC3ASX_00305;Parent=gene-AC3ASX_00305;Note=frameshifted%3B internal stop;Ontology_term=GO:0008152,GO:1901704,GO:0004356;gbkey=CDS;go_function=glutamine synthetase activity|0004356||IEA;go_process=metabolic process|0008152||IEA,L-glutamine biosynthetic process|1901704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429882.1;locus_tag=AC3ASX_00305;product=glutamine synthetase beta-grasp domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 59366 60343 . - . ID=gene-AC3ASX_00310;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=AC3ASX_00310 JBYLIA010000001.1 Protein Homology CDS 59366 60343 . - 0 ID=cds-MHV1764190.1;Parent=gene-AC3ASX_00310;Dbxref=NCBI_GP:MHV1764190.1;Name=MHV1764190.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021836.1;locus_tag=AC3ASX_00310;product=DNA polymerase III subunit delta;protein_id=MHV1764190.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 60444 60940 . + . ID=gene-AC3ASX_00315;Name=AC3ASX_00315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00315;pseudo=true JBYLIA010000001.1 Protein Homology CDS 60444 60940 . + 0 ID=cds-AC3ASX_00315;Parent=gene-AC3ASX_00315;Note=frameshifted%3B internal stop;Ontology_term=GO:0006950,GO:0008289,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=lipid binding|0008289||IEA;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013921957.1;locus_tag=AC3ASX_00315;product=lipocalin family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 61137 62423 . + . ID=gene-AC3ASX_00320;Name=AC3ASX_00320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00320 JBYLIA010000001.1 Protein Homology CDS 61137 62423 . + 0 ID=cds-MHV1764191.1;Parent=gene-AC3ASX_00320;Dbxref=NCBI_GP:MHV1764191.1;Name=MHV1764191.1;Ontology_term=GO:0003333;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287081.1;locus_tag=AC3ASX_00320;product=aromatic amino acid transport family protein;protein_id=MHV1764191.1;transl_table=11 JBYLIA010000001.1 Genbank gene 62741 64288 . - . ID=gene-AC3ASX_00325;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=AC3ASX_00325 JBYLIA010000001.1 Protein Homology CDS 62741 64288 . - 0 ID=cds-MHV1764192.1;Parent=gene-AC3ASX_00325;Dbxref=NCBI_GP:MHV1764192.1;Name=MHV1764192.1;Ontology_term=GO:0006164,GO:0006189,GO:0003824,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=catalytic activity|0003824||IEA,IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA,'de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286678.1;locus_tag=AC3ASX_00325;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=MHV1764192.1;transl_table=11 JBYLIA010000001.1 Genbank gene 64472 65758 . + . ID=gene-AC3ASX_00330;Name=AC3ASX_00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00330 JBYLIA010000001.1 Protein Homology CDS 64472 65758 . + 0 ID=cds-MHV1764193.1;Parent=gene-AC3ASX_00330;Dbxref=NCBI_GP:MHV1764193.1;Name=MHV1764193.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035232.1;locus_tag=AC3ASX_00330;product=adenylosuccinate synthase;protein_id=MHV1764193.1;transl_table=11 JBYLIA010000001.1 Genbank gene 65762 66295 . + . ID=gene-AC3ASX_00335;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=AC3ASX_00335 JBYLIA010000001.1 Protein Homology CDS 65762 66295 . + 0 ID=cds-MHV1764194.1;Parent=gene-AC3ASX_00335;Dbxref=NCBI_GP:MHV1764194.1;Name=MHV1764194.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547499.1;locus_tag=AC3ASX_00335;product=hypoxanthine phosphoribosyltransferase;protein_id=MHV1764194.1;transl_table=11 JBYLIA010000001.1 Genbank gene 66314 66655 . - . ID=gene-AC3ASX_00340;Name=AC3ASX_00340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00340 JBYLIA010000001.1 Protein Homology CDS 66314 66655 . - 0 ID=cds-MHV1764195.1;Parent=gene-AC3ASX_00340;Dbxref=NCBI_GP:MHV1764195.1;Name=MHV1764195.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF013866.7;locus_tag=AC3ASX_00340;product=dienelactone hydrolase family protein;protein_id=MHV1764195.1;transl_table=11 JBYLIA010000001.1 Genbank gene 66648 66860 . - . ID=gene-AC3ASX_00345;Name=AC3ASX_00345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00345 JBYLIA010000001.1 Protein Homology CDS 66648 66860 . - 0 ID=cds-MHV1764196.1;Parent=gene-AC3ASX_00345;Dbxref=NCBI_GP:MHV1764196.1;Name=MHV1764196.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF013866.7;locus_tag=AC3ASX_00345;product=dienelactone hydrolase family protein;protein_id=MHV1764196.1;transl_table=11 JBYLIA010000001.1 Genbank gene 67125 67985 . - . ID=gene-AC3ASX_00350;Name=AC3ASX_00350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00350 JBYLIA010000001.1 Protein Homology CDS 67125 67985 . - 0 ID=cds-MHV1764197.1;Parent=gene-AC3ASX_00350;Dbxref=NCBI_GP:MHV1764197.1;Name=MHV1764197.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429877.1;locus_tag=AC3ASX_00350;product=metal ABC transporter permease;protein_id=MHV1764197.1;transl_table=11 JBYLIA010000001.1 Genbank gene 67927 68604 . - . ID=gene-AC3ASX_00355;Name=AC3ASX_00355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00355 JBYLIA010000001.1 Protein Homology CDS 67927 68604 . - 0 ID=cds-MHV1764198.1;Parent=gene-AC3ASX_00355;Dbxref=NCBI_GP:MHV1764198.1;Name=MHV1764198.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429876.1;locus_tag=AC3ASX_00355;product=metal ABC transporter ATP-binding protein;protein_id=MHV1764198.1;transl_table=11 JBYLIA010000001.1 Genbank gene 68606 69523 . - . ID=gene-AC3ASX_00360;Name=AC3ASX_00360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00360 JBYLIA010000001.1 Protein Homology CDS 68606 69523 . - 0 ID=cds-MHV1764199.1;Parent=gene-AC3ASX_00360;Dbxref=NCBI_GP:MHV1764199.1;Name=MHV1764199.1;Ontology_term=GO:0030001,GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017523.1;locus_tag=AC3ASX_00360;product=metal ABC transporter solute-binding protein%2C Zn/Mn family;protein_id=MHV1764199.1;transl_table=11 JBYLIA010000001.1 Genbank gene 69598 70821 . - . ID=gene-AC3ASX_00365;Name=AC3ASX_00365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00365 JBYLIA010000001.1 Protein Homology CDS 69598 70821 . - 0 ID=cds-MHV1764200.1;Parent=gene-AC3ASX_00365;Dbxref=NCBI_GP:MHV1764200.1;Name=MHV1764200.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003043338.1;locus_tag=AC3ASX_00365;product=MFS transporter;protein_id=MHV1764200.1;transl_table=11 JBYLIA010000001.1 Genbank gene 70944 71408 . - . ID=gene-AC3ASX_00370;Name=AC3ASX_00370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00370 JBYLIA010000001.1 Protein Homology CDS 70944 71408 . - 0 ID=cds-MHV1764201.1;Parent=gene-AC3ASX_00370;Dbxref=NCBI_GP:MHV1764201.1;Name=MHV1764201.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004338894.1;locus_tag=AC3ASX_00370;product=outer membrane lipoprotein;protein_id=MHV1764201.1;transl_table=11 JBYLIA010000001.1 Genbank gene 71419 72015 . - . ID=gene-AC3ASX_00375;Name=wrbA;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=AC3ASX_00375 JBYLIA010000001.1 Protein Homology CDS 71419 72015 . - 0 ID=cds-MHV1764202.1;Parent=gene-AC3ASX_00375;Dbxref=NCBI_GP:MHV1764202.1;Name=MHV1764202.1;Ontology_term=GO:0003955,GO:0010181;gbkey=CDS;gene=wrbA;go_function=NAD(P)H dehydrogenase (quinone) activity|0003955||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003041552.1;locus_tag=AC3ASX_00375;product=NAD(P)H:quinone oxidoreductase;protein_id=MHV1764202.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 72021 73164 . + . ID=gene-AC3ASX_00380;Name=AC3ASX_00380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00380;pseudo=true JBYLIA010000001.1 Protein Homology CDS 72021 73164 . + 0 ID=cds-AC3ASX_00380;Parent=gene-AC3ASX_00380;Note=frameshifted%3B internal stop;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017519.1;locus_tag=AC3ASX_00380;product=YihY family inner membrane protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 73183 73758 . + . ID=gene-AC3ASX_00385;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=AC3ASX_00385 JBYLIA010000001.1 Protein Homology CDS 73183 73758 . + 0 ID=cds-MHV1764203.1;Parent=gene-AC3ASX_00385;Dbxref=NCBI_GP:MHV1764203.1;Name=MHV1764203.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429874.1;locus_tag=AC3ASX_00385;product=nicotinamide riboside transporter PnuC;protein_id=MHV1764203.1;transl_table=11 JBYLIA010000001.1 Genbank gene 73755 75908 . + . ID=gene-AC3ASX_00390;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=AC3ASX_00390 JBYLIA010000001.1 Protein Homology CDS 73755 75908 . + 0 ID=cds-MHV1764204.1;Parent=gene-AC3ASX_00390;Dbxref=NCBI_GP:MHV1764204.1;Name=MHV1764204.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678;gbkey=CDS;gene=priA;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429873.1;locus_tag=AC3ASX_00390;product=replication restart helicase PriA;protein_id=MHV1764204.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 76669 76912 . - . ID=gene-AC3ASX_00395;Name=AC3ASX_00395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00395;pseudo=true JBYLIA010000001.1 Protein Homology CDS 76669 76912 . - 0 ID=cds-AC3ASX_00395;Parent=gene-AC3ASX_00395;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003043330.1;locus_tag=AC3ASX_00395;product=transporter substrate-binding domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 77070 77180 . - . ID=gene-AC3ASX_00400;Name=AC3ASX_00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00400 JBYLIA010000001.1 Protein Homology CDS 77070 77180 . - 0 ID=cds-MHV1764205.1;Parent=gene-AC3ASX_00400;Dbxref=NCBI_GP:MHV1764205.1;Name=MHV1764205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014214.1;locus_tag=AC3ASX_00400;product=CydX/CbdX family cytochrome bd oxidase small subunit;protein_id=MHV1764205.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 77197 78391 . - . ID=gene-AC3ASX_00405;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=pseudogene;locus_tag=AC3ASX_00405;pseudo=true JBYLIA010000001.1 Protein Homology CDS 77197 78391 . - 0 ID=cds-AC3ASX_00405;Parent=gene-AC3ASX_00405;Note=frameshifted%3B internal stop;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004338910.1;locus_tag=AC3ASX_00405;product=cytochrome d ubiquinol oxidase subunit II;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 78406 80154 . - . ID=gene-AC3ASX_00410;Name=AC3ASX_00410;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00410;pseudo=true JBYLIA010000001.1 Protein Homology CDS 78406 80154 . - 0 ID=cds-AC3ASX_00410;Parent=gene-AC3ASX_00410;Note=internal stop;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547514.1;locus_tag=AC3ASX_00410;product=cytochrome ubiquinol oxidase subunit I;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 80849 81367 . + . ID=gene-AC3ASX_00415;Name=AC3ASX_00415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00415 JBYLIA010000001.1 GeneMarkS-2+ CDS 80849 81367 . + 0 ID=cds-MHV1764206.1;Parent=gene-AC3ASX_00415;Dbxref=NCBI_GP:MHV1764206.1;Name=MHV1764206.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_00415;product=hypothetical protein;protein_id=MHV1764206.1;transl_table=11 JBYLIA010000001.1 Genbank gene 81442 81753 . + . ID=gene-AC3ASX_00420;Name=AC3ASX_00420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00420 JBYLIA010000001.1 GeneMarkS-2+ CDS 81442 81753 . + 0 ID=cds-MHV1764207.1;Parent=gene-AC3ASX_00420;Dbxref=NCBI_GP:MHV1764207.1;Name=MHV1764207.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_00420;product=hypothetical protein;protein_id=MHV1764207.1;transl_table=11 JBYLIA010000001.1 Genbank gene 81997 82272 . + . ID=gene-AC3ASX_00425;Name=AC3ASX_00425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00425 JBYLIA010000001.1 GeneMarkS-2+ CDS 81997 82272 . + 0 ID=cds-MHV1764208.1;Parent=gene-AC3ASX_00425;Dbxref=NCBI_GP:MHV1764208.1;Name=MHV1764208.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_00425;product=hypothetical protein;protein_id=MHV1764208.1;transl_table=11 JBYLIA010000001.1 Genbank gene 82408 82623 . + . ID=gene-AC3ASX_00430;Name=AC3ASX_00430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00430 JBYLIA010000001.1 GeneMarkS-2+ CDS 82408 82623 . + 0 ID=cds-MHV1764209.1;Parent=gene-AC3ASX_00430;Dbxref=NCBI_GP:MHV1764209.1;Name=MHV1764209.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_00430;product=hypothetical protein;protein_id=MHV1764209.1;transl_table=11 JBYLIA010000001.1 Genbank gene 82635 82850 . + . ID=gene-AC3ASX_00435;Name=AC3ASX_00435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00435 JBYLIA010000001.1 Protein Homology CDS 82635 82850 . + 0 ID=cds-MHV1764210.1;Parent=gene-AC3ASX_00435;Dbxref=NCBI_GP:MHV1764210.1;Name=MHV1764210.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF052847.1;locus_tag=AC3ASX_00435;product=hypothetical protein;protein_id=MHV1764210.1;transl_table=11 JBYLIA010000001.1 Genbank gene 83416 84678 . + . ID=gene-AC3ASX_00440;Name=AC3ASX_00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00440 JBYLIA010000001.1 Protein Homology CDS 83416 84678 . + 0 ID=cds-MHV1764211.1;Parent=gene-AC3ASX_00440;Dbxref=NCBI_GP:MHV1764211.1;Name=MHV1764211.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013069.7;locus_tag=AC3ASX_00440;product=efflux RND transporter permease subunit;protein_id=MHV1764211.1;transl_table=11 JBYLIA010000001.1 Genbank gene 84851 85051 . + . ID=gene-AC3ASX_00445;Name=AC3ASX_00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00445 JBYLIA010000001.1 GeneMarkS-2+ CDS 84851 85051 . + 0 ID=cds-MHV1764212.1;Parent=gene-AC3ASX_00445;Dbxref=NCBI_GP:MHV1764212.1;Name=MHV1764212.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_00445;product=hypothetical protein;protein_id=MHV1764212.1;transl_table=11 JBYLIA010000001.1 Genbank gene 85175 85645 . + . ID=gene-AC3ASX_00450;Name=AC3ASX_00450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00450 JBYLIA010000001.1 Protein Homology CDS 85175 85645 . + 0 ID=cds-MHV1764213.1;Parent=gene-AC3ASX_00450;Dbxref=NCBI_GP:MHV1764213.1;Name=MHV1764213.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013069.7;locus_tag=AC3ASX_00450;product=efflux RND transporter permease subunit;protein_id=MHV1764213.1;transl_table=11 JBYLIA010000001.1 Genbank gene 86185 87543 . - . ID=gene-AC3ASX_00455;Name=AC3ASX_00455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00455 JBYLIA010000001.1 Protein Homology CDS 86185 87543 . - 0 ID=cds-MHV1764214.1;Parent=gene-AC3ASX_00455;Dbxref=NCBI_GP:MHV1764214.1;Name=MHV1764214.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014222.1;locus_tag=AC3ASX_00455;product=MFS transporter;protein_id=MHV1764214.1;transl_table=11 JBYLIA010000001.1 Genbank gene 87737 88645 . + . ID=gene-AC3ASX_00460;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=AC3ASX_00460 JBYLIA010000001.1 Protein Homology CDS 87737 88645 . + 0 ID=cds-MHV1764215.1;Parent=gene-AC3ASX_00460;Dbxref=NCBI_GP:MHV1764215.1;Name=MHV1764215.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoA;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003028869.1;locus_tag=AC3ASX_00460;product=ubiquinol oxidase subunit II;protein_id=MHV1764215.1;transl_table=11 JBYLIA010000001.1 Genbank gene 88684 90714 . + . ID=gene-AC3ASX_00465;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=AC3ASX_00465 JBYLIA010000001.1 Protein Homology CDS 88684 90714 . + 0 ID=cds-MHV1764216.1;Parent=gene-AC3ASX_00465;Dbxref=NCBI_GP:MHV1764216.1;Name=MHV1764216.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoB;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003027265.1;locus_tag=AC3ASX_00465;product=cytochrome o ubiquinol oxidase subunit I;protein_id=MHV1764216.1;transl_table=11 JBYLIA010000001.1 Genbank gene 90711 91313 . + . ID=gene-AC3ASX_00470;Name=cyoC;gbkey=Gene;gene=cyoC;gene_biotype=protein_coding;locus_tag=AC3ASX_00470 JBYLIA010000001.1 Protein Homology CDS 90711 91313 . + 0 ID=cds-MHV1764217.1;Parent=gene-AC3ASX_00470;Dbxref=NCBI_GP:MHV1764217.1;Name=MHV1764217.1;Ontology_term=GO:0019646,GO:0009486;gbkey=CDS;gene=cyoC;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003027262.1;locus_tag=AC3ASX_00470;product=cytochrome o ubiquinol oxidase subunit III;protein_id=MHV1764217.1;transl_table=11 JBYLIA010000001.1 Genbank gene 91315 91647 . + . ID=gene-AC3ASX_00475;Name=cyoD;gbkey=Gene;gene=cyoD;gene_biotype=protein_coding;locus_tag=AC3ASX_00475 JBYLIA010000001.1 Protein Homology CDS 91315 91647 . + 0 ID=cds-MHV1764218.1;Parent=gene-AC3ASX_00475;Dbxref=NCBI_GP:MHV1764218.1;Name=MHV1764218.1;Ontology_term=GO:0015990,GO:0009486,GO:0016020;gbkey=CDS;gene=cyoD;go_component=membrane|0016020||IEA;go_function=cytochrome bo3 ubiquinol oxidase activity|0009486||IEA;go_process=electron transport coupled proton transport|0015990||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021682.1;locus_tag=AC3ASX_00475;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=MHV1764218.1;transl_table=11 JBYLIA010000001.1 Genbank gene 91676 92524 . + . ID=gene-AC3ASX_00480;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=AC3ASX_00480 JBYLIA010000001.1 Protein Homology CDS 91676 92524 . + 0 ID=cds-MHV1764219.1;Parent=gene-AC3ASX_00480;Dbxref=NCBI_GP:MHV1764219.1;Name=MHV1764219.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021678.1;locus_tag=AC3ASX_00480;product=heme o synthase;protein_id=MHV1764219.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 92786 93806 . - . ID=gene-AC3ASX_00485;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=pseudogene;locus_tag=AC3ASX_00485;pseudo=true JBYLIA010000001.1 Protein Homology CDS 92786 93806 . - 0 ID=cds-AC3ASX_00485;Parent=gene-AC3ASX_00485;Note=frameshifted;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429842.1;locus_tag=AC3ASX_00485;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 93912 94609 . - . ID=gene-AC3ASX_00490;Name=AC3ASX_00490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00490;pseudo=true JBYLIA010000001.1 Protein Homology CDS 93912 94609 . - 0 ID=cds-AC3ASX_00490;Parent=gene-AC3ASX_00490;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429841.1;locus_tag=AC3ASX_00490;product=radical SAM protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 94609 95460 . - . ID=gene-AC3ASX_00495;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=pseudogene;locus_tag=AC3ASX_00495;pseudo=true JBYLIA010000001.1 Protein Homology CDS 94609 95460 . - 0 ID=cds-AC3ASX_00495;Parent=gene-AC3ASX_00495;Note=internal stop;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021671.1;locus_tag=AC3ASX_00495;product=pyridoxal kinase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 95467 95901 . - . ID=gene-AC3ASX_00500;Name=AC3ASX_00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00500 JBYLIA010000001.1 Protein Homology CDS 95467 95901 . - 0 ID=cds-MHV1764220.1;Parent=gene-AC3ASX_00500;Dbxref=NCBI_GP:MHV1764220.1;Name=MHV1764220.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021668.1;locus_tag=AC3ASX_00500;product=DUF3568 family protein;protein_id=MHV1764220.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 96047 97009 . + . ID=gene-AC3ASX_00505;Name=AC3ASX_00505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00505;pseudo=true JBYLIA010000001.1 Protein Homology CDS 96047 97009 . + 0 ID=cds-AC3ASX_00505;Parent=gene-AC3ASX_00505;Note=frameshifted%3B internal stop;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714289.1;locus_tag=AC3ASX_00505;product=AAA family ATPase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 97218 97929 . + . ID=gene-AC3ASX_00510;Name=AC3ASX_00510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00510;pseudo=true JBYLIA010000001.1 Protein Homology CDS 97218 97929 . + 0 ID=cds-AC3ASX_00510;Parent=gene-AC3ASX_00510;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013998.8;locus_tag=AC3ASX_00510;product=DUF58 domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 97919 98394 . + . ID=gene-AC3ASX_00515;Name=AC3ASX_00515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00515;pseudo=true JBYLIA010000001.1 Protein Homology CDS 97919 98394 . + 0 ID=cds-AC3ASX_00515;Parent=gene-AC3ASX_00515;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003043310.1;locus_tag=AC3ASX_00515;product=DUF4381 domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 98391 99388 . + . ID=gene-AC3ASX_00520;Name=AC3ASX_00520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00520;pseudo=true JBYLIA010000001.1 Protein Homology CDS 98391 99388 . + 0 ID=cds-AC3ASX_00520;Parent=gene-AC3ASX_00520;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547529.1;locus_tag=AC3ASX_00520;product=VWA domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 99394 99705 . + . ID=gene-AC3ASX_00525;Name=AC3ASX_00525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00525;pseudo=true JBYLIA010000001.1 Protein Homology CDS 99394 99705 . + 0 ID=cds-AC3ASX_00525;Parent=gene-AC3ASX_00525;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003043306.1;locus_tag=AC3ASX_00525;product=vWA domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 99709 100164 . + . ID=gene-AC3ASX_00530;Name=AC3ASX_00530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00530;pseudo=true JBYLIA010000001.1 Protein Homology CDS 99709 100164 . + 0 ID=cds-AC3ASX_00530;Parent=gene-AC3ASX_00530;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003027237.1;locus_tag=AC3ASX_00530;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 100154 101778 . + . ID=gene-AC3ASX_00535;Name=AC3ASX_00535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00535;pseudo=true JBYLIA010000001.1 Protein Homology CDS 100154 101778 . + 0 ID=cds-AC3ASX_00535;Parent=gene-AC3ASX_00535;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014367909.1;locus_tag=AC3ASX_00535;product=BatD family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 101785 102003 . + . ID=gene-AC3ASX_00540;Name=AC3ASX_00540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00540 JBYLIA010000001.1 GeneMarkS-2+ CDS 101785 102003 . + 0 ID=cds-MHV1764221.1;Parent=gene-AC3ASX_00540;Dbxref=NCBI_GP:MHV1764221.1;Name=MHV1764221.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_00540;product=hypothetical protein;protein_id=MHV1764221.1;transl_table=11 JBYLIA010000001.1 Genbank gene 101943 102074 . + . ID=gene-AC3ASX_00545;Name=AC3ASX_00545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00545 JBYLIA010000001.1 Protein Homology CDS 101943 102074 . + 0 ID=cds-MHV1764222.1;Parent=gene-AC3ASX_00545;Dbxref=NCBI_GP:MHV1764222.1;Name=MHV1764222.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013624.7;locus_tag=AC3ASX_00545;product=hypothetical protein;protein_id=MHV1764222.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 102019 102363 . + . ID=gene-AC3ASX_00550;Name=AC3ASX_00550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00550;pseudo=true JBYLIA010000001.1 Protein Homology CDS 102019 102363 . + 0 ID=cds-AC3ASX_00550;Parent=gene-AC3ASX_00550;Note=internal stop;Ontology_term=GO:0006508,GO:0016920;gbkey=CDS;go_function=pyroglutamyl-peptidase activity|0016920||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: protein motif:HMM:NF013624.7;locus_tag=AC3ASX_00550;product=pyroglutamyl-peptidase I;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 102459 102943 . + . ID=gene-AC3ASX_00555;Name=AC3ASX_00555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00555;pseudo=true JBYLIA010000001.1 Protein Homology CDS 102459 102943 . + 0 ID=cds-AC3ASX_00555;Parent=gene-AC3ASX_00555;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003041498.1;locus_tag=AC3ASX_00555;product=transporter suffix domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 102987 103424 . + . ID=gene-AC3ASX_00560;Name=AC3ASX_00560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00560 JBYLIA010000001.1 Protein Homology CDS 102987 103424 . + 0 ID=cds-MHV1764223.1;Parent=gene-AC3ASX_00560;Dbxref=NCBI_GP:MHV1764223.1;Name=MHV1764223.1;Ontology_term=GO:0006260,GO:0006261,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA,DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003023138.1;locus_tag=AC3ASX_00560;product=DNA polymerase III subunit chi;protein_id=MHV1764223.1;transl_table=11 JBYLIA010000001.1 Genbank gene 103572 106331 . + . ID=gene-AC3ASX_00565;Name=AC3ASX_00565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00565 JBYLIA010000001.1 Protein Homology CDS 103572 106331 . + 0 ID=cds-MHV1764224.1;Parent=gene-AC3ASX_00565;Dbxref=NCBI_GP:MHV1764224.1;Name=MHV1764224.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003027231.1;locus_tag=AC3ASX_00565;product=valine--tRNA ligase;protein_id=MHV1764224.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 108312 109095 . - . ID=gene-AC3ASX_00570;Name=AC3ASX_00570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00570;pseudo=true JBYLIA010000001.1 Protein Homology CDS 108312 109095 . - 0 ID=cds-AC3ASX_00570;Parent=gene-AC3ASX_00570;Note=frameshifted%3B internal stop;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014268.1;locus_tag=AC3ASX_00570;product=alpha-hydroxy-acid oxidizing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 109129 109777 . - . ID=gene-AC3ASX_00575;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=pseudogene;locus_tag=AC3ASX_00575;pseudo=true JBYLIA010000001.1 Protein Homology CDS 109129 109777 . - 0 ID=cds-AC3ASX_00575;Parent=gene-AC3ASX_00575;Note=frameshifted;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547542.1;locus_tag=AC3ASX_00575;product=oxygen-insensitive NAD(P)H nitroreductase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 109927 110269 . + . ID=gene-AC3ASX_00580;Name=AC3ASX_00580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00580;pseudo=true JBYLIA010000001.1 Protein Homology CDS 109927 110269 . + 0 ID=cds-AC3ASX_00580;Parent=gene-AC3ASX_00580;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010030897.1;locus_tag=AC3ASX_00580;product=NUDIX domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 110441 111832 . + . ID=gene-AC3ASX_00585;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=AC3ASX_00585 JBYLIA010000001.1 Protein Homology CDS 110441 111832 . + 0 ID=cds-MHV1764225.1;Parent=gene-AC3ASX_00585;Dbxref=NCBI_GP:MHV1764225.1;Name=MHV1764225.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010030898.1;locus_tag=AC3ASX_00585;product=class II fumarate hydratase;protein_id=MHV1764225.1;transl_table=11 JBYLIA010000001.1 Genbank gene 111965 113374 . + . ID=gene-AC3ASX_00590;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=AC3ASX_00590 JBYLIA010000001.1 Protein Homology CDS 111965 113374 . + 0 ID=cds-MHV1764226.1;Parent=gene-AC3ASX_00590;Dbxref=NCBI_GP:MHV1764226.1;Name=MHV1764226.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003043278.1;locus_tag=AC3ASX_00590;product=glutamate--tRNA ligase;protein_id=MHV1764226.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 113362 114351 . + . ID=gene-AC3ASX_00595;Name=AC3ASX_00595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00595;pseudo=true JBYLIA010000001.1 Protein Homology CDS 113362 114351 . + 0 ID=cds-AC3ASX_00595;Parent=gene-AC3ASX_00595;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003030995.1;locus_tag=AC3ASX_00595;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 114434 114509 . + . ID=gene-AC3ASX_00600;Name=AC3ASX_00600;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_00600 JBYLIA010000001.1 tRNAscan-SE tRNA 114434 114509 . + . ID=rna-AC3ASX_00600;Parent=gene-AC3ASX_00600;anticodon=(pos:114468..114470);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_00600;product=tRNA-Glu JBYLIA010000001.1 tRNAscan-SE exon 114434 114509 . + . ID=exon-AC3ASX_00600-1;Parent=rna-AC3ASX_00600;anticodon=(pos:114468..114470);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_00600;product=tRNA-Glu JBYLIA010000001.1 Genbank pseudogene 114584 115127 . - . ID=gene-AC3ASX_00605;Name=AC3ASX_00605;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00605;pseudo=true JBYLIA010000001.1 Protein Homology CDS 114584 115127 . - 0 ID=cds-AC3ASX_00605;Parent=gene-AC3ASX_00605;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014284.1;locus_tag=AC3ASX_00605;product=arginine deiminase-related protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 115203 115703 . - . ID=gene-AC3ASX_00610;Name=AC3ASX_00610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00610 JBYLIA010000001.1 Protein Homology CDS 115203 115703 . - 0 ID=cds-MHV1764227.1;Parent=gene-AC3ASX_00610;Dbxref=NCBI_GP:MHV1764227.1;Name=MHV1764227.1;Ontology_term=GO:0046654,GO:0004146,GO:0050661;gbkey=CDS;go_function=dihydrofolate reductase activity|0004146||IEA,NADP binding|0050661||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011242231.1;locus_tag=AC3ASX_00610;product=dihydrofolate reductase;protein_id=MHV1764227.1;transl_table=11 JBYLIA010000001.1 Genbank gene 115946 116665 . + . ID=gene-AC3ASX_00615;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=AC3ASX_00615 JBYLIA010000001.1 Protein Homology CDS 115946 116665 . + 0 ID=cds-MHV1764228.1;Parent=gene-AC3ASX_00615;Dbxref=NCBI_GP:MHV1764228.1;Name=MHV1764228.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017695.1;locus_tag=AC3ASX_00615;product=30S ribosomal protein S2;protein_id=MHV1764228.1;transl_table=11 JBYLIA010000001.1 Genbank gene 116687 117556 . + . ID=gene-AC3ASX_00620;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=AC3ASX_00620 JBYLIA010000001.1 Protein Homology CDS 116687 117556 . + 0 ID=cds-MHV1764229.1;Parent=gene-AC3ASX_00620;Dbxref=NCBI_GP:MHV1764229.1;Name=MHV1764229.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286628.1;locus_tag=AC3ASX_00620;product=translation elongation factor Ts;protein_id=MHV1764229.1;transl_table=11 JBYLIA010000001.1 Genbank gene 117560 118309 . + . ID=gene-AC3ASX_00625;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=AC3ASX_00625 JBYLIA010000001.1 Protein Homology CDS 117560 118309 . + 0 ID=cds-MHV1764230.1;Parent=gene-AC3ASX_00625;Dbxref=NCBI_GP:MHV1764230.1;Name=MHV1764230.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547551.1;locus_tag=AC3ASX_00625;product=UMP kinase;protein_id=MHV1764230.1;transl_table=11 JBYLIA010000001.1 Genbank gene 118331 118888 . + . ID=gene-AC3ASX_00630;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=AC3ASX_00630 JBYLIA010000001.1 Protein Homology CDS 118331 118888 . + 0 ID=cds-MHV1764231.1;Parent=gene-AC3ASX_00630;Dbxref=NCBI_GP:MHV1764231.1;Name=MHV1764231.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014302.1;locus_tag=AC3ASX_00630;product=ribosome recycling factor;protein_id=MHV1764231.1;transl_table=11 JBYLIA010000001.1 Genbank gene 118972 119694 . + . ID=gene-AC3ASX_00635;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=AC3ASX_00635 JBYLIA010000001.1 Protein Homology CDS 118972 119694 . + 0 ID=cds-MHV1764232.1;Parent=gene-AC3ASX_00635;Dbxref=NCBI_GP:MHV1764232.1;Name=MHV1764232.1;Ontology_term=GO:0009252,GO:0005737;gbkey=CDS;gene=uppS;go_component=cytoplasm|0005737||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549296.1;locus_tag=AC3ASX_00635;product=polyprenyl diphosphate synthase;protein_id=MHV1764232.1;transl_table=11 JBYLIA010000001.1 Genbank gene 119708 120502 . + . ID=gene-AC3ASX_00640;Name=AC3ASX_00640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00640 JBYLIA010000001.1 Protein Homology CDS 119708 120502 . + 0 ID=cds-MHV1764233.1;Parent=gene-AC3ASX_00640;Dbxref=NCBI_GP:MHV1764233.1;Name=MHV1764233.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017691.1;locus_tag=AC3ASX_00640;product=phosphatidate cytidylyltransferase;protein_id=MHV1764233.1;transl_table=11 JBYLIA010000001.1 Genbank gene 120512 120958 . + . ID=gene-AC3ASX_00645;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=AC3ASX_00645 JBYLIA010000001.1 Protein Homology CDS 120512 120958 . + 0 ID=cds-MHV1764234.1;Parent=gene-AC3ASX_00645;Dbxref=NCBI_GP:MHV1764234.1;Name=MHV1764234.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286623.1;locus_tag=AC3ASX_00645;product=dUTP diphosphatase;protein_id=MHV1764234.1;transl_table=11 JBYLIA010000001.1 Genbank gene 120962 121558 . + . ID=gene-AC3ASX_00650;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=AC3ASX_00650 JBYLIA010000001.1 Protein Homology CDS 120962 121558 . + 0 ID=cds-MHV1764235.1;Parent=gene-AC3ASX_00650;Dbxref=NCBI_GP:MHV1764235.1;Name=MHV1764235.1;Ontology_term=GO:0008654,GO:0008444,GO:0016020;gbkey=CDS;gene=pgsA;go_component=membrane|0016020||IEA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003027208.1;locus_tag=AC3ASX_00650;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=MHV1764235.1;transl_table=11 JBYLIA010000001.1 Genbank gene 121693 122067 . + . ID=gene-AC3ASX_00655;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=AC3ASX_00655 JBYLIA010000001.1 Protein Homology CDS 121693 122067 . + 0 ID=cds-MHV1764236.1;Parent=gene-AC3ASX_00655;Dbxref=NCBI_GP:MHV1764236.1;Name=MHV1764236.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286621.1;locus_tag=AC3ASX_00655;product=30S ribosomal protein S12;protein_id=MHV1764236.1;transl_table=11 JBYLIA010000001.1 Genbank gene 122106 122579 . + . ID=gene-AC3ASX_00660;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=AC3ASX_00660 JBYLIA010000001.1 Protein Homology CDS 122106 122579 . + 0 ID=cds-MHV1764237.1;Parent=gene-AC3ASX_00660;Dbxref=NCBI_GP:MHV1764237.1;Name=MHV1764237.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922016.1;locus_tag=AC3ASX_00660;product=30S ribosomal protein S7;protein_id=MHV1764237.1;transl_table=11 JBYLIA010000001.1 Genbank gene 122594 124708 . + . ID=gene-AC3ASX_00665;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=AC3ASX_00665 JBYLIA010000001.1 Protein Homology CDS 122594 124708 . + 0 ID=cds-MHV1764238.1;Parent=gene-AC3ASX_00665;Dbxref=NCBI_GP:MHV1764238.1;Name=MHV1764238.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286619.1;locus_tag=AC3ASX_00665;product=elongation factor G;protein_id=MHV1764238.1;transl_table=11 JBYLIA010000001.1 Genbank gene 124729 125046 . + . ID=gene-AC3ASX_00670;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=AC3ASX_00670 JBYLIA010000001.1 Protein Homology CDS 124729 125046 . + 0 ID=cds-MHV1764239.1;Parent=gene-AC3ASX_00670;Dbxref=NCBI_GP:MHV1764239.1;Name=MHV1764239.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286618.1;locus_tag=AC3ASX_00670;product=30S ribosomal protein S10;protein_id=MHV1764239.1;transl_table=11 JBYLIA010000001.1 Genbank gene 125155 125787 . + . ID=gene-AC3ASX_00675;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=AC3ASX_00675 JBYLIA010000001.1 Protein Homology CDS 125155 125787 . + 0 ID=cds-MHV1764240.1;Parent=gene-AC3ASX_00675;Dbxref=NCBI_GP:MHV1764240.1;Name=MHV1764240.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003027202.1;locus_tag=AC3ASX_00675;product=50S ribosomal protein L3;protein_id=MHV1764240.1;transl_table=11 JBYLIA010000001.1 Genbank gene 125820 126443 . + . ID=gene-AC3ASX_00680;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=AC3ASX_00680 JBYLIA010000001.1 Protein Homology CDS 125820 126443 . + 0 ID=cds-MHV1764241.1;Parent=gene-AC3ASX_00680;Dbxref=NCBI_GP:MHV1764241.1;Name=MHV1764241.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922019.1;locus_tag=AC3ASX_00680;product=50S ribosomal protein L4;protein_id=MHV1764241.1;transl_table=11 JBYLIA010000001.1 Genbank gene 126440 126739 . + . ID=gene-AC3ASX_00685;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=AC3ASX_00685 JBYLIA010000001.1 Protein Homology CDS 126440 126739 . + 0 ID=cds-MHV1764242.1;Parent=gene-AC3ASX_00685;Dbxref=NCBI_GP:MHV1764242.1;Name=MHV1764242.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplW;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286615.1;locus_tag=AC3ASX_00685;product=50S ribosomal protein L23;protein_id=MHV1764242.1;transl_table=11 JBYLIA010000001.1 Genbank gene 126760 127584 . + . ID=gene-AC3ASX_00690;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=AC3ASX_00690 JBYLIA010000001.1 Protein Homology CDS 126760 127584 . + 0 ID=cds-MHV1764243.1;Parent=gene-AC3ASX_00690;Dbxref=NCBI_GP:MHV1764243.1;Name=MHV1764243.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003027197.1;locus_tag=AC3ASX_00690;product=50S ribosomal protein L2;protein_id=MHV1764243.1;transl_table=11 JBYLIA010000001.1 Genbank gene 127599 127877 . + . ID=gene-AC3ASX_00695;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=AC3ASX_00695 JBYLIA010000001.1 Protein Homology CDS 127599 127877 . + 0 ID=cds-MHV1764244.1;Parent=gene-AC3ASX_00695;Dbxref=NCBI_GP:MHV1764244.1;Name=MHV1764244.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003027195.1;locus_tag=AC3ASX_00695;product=30S ribosomal protein S19;protein_id=MHV1764244.1;transl_table=11 JBYLIA010000001.1 Genbank gene 127893 128228 . + . ID=gene-AC3ASX_00700;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=AC3ASX_00700 JBYLIA010000001.1 Protein Homology CDS 127893 128228 . + 0 ID=cds-MHV1764245.1;Parent=gene-AC3ASX_00700;Dbxref=NCBI_GP:MHV1764245.1;Name=MHV1764245.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547563.1;locus_tag=AC3ASX_00700;product=50S ribosomal protein L22;protein_id=MHV1764245.1;transl_table=11 JBYLIA010000001.1 Genbank gene 128244 128912 . + . ID=gene-AC3ASX_00705;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=AC3ASX_00705 JBYLIA010000001.1 Protein Homology CDS 128244 128912 . + 0 ID=cds-MHV1764246.1;Parent=gene-AC3ASX_00705;Dbxref=NCBI_GP:MHV1764246.1;Name=MHV1764246.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429819.1;locus_tag=AC3ASX_00705;product=30S ribosomal protein S3;protein_id=MHV1764246.1;transl_table=11 JBYLIA010000001.1 Genbank gene 128912 129325 . + . ID=gene-AC3ASX_00710;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=AC3ASX_00710 JBYLIA010000001.1 Protein Homology CDS 128912 129325 . + 0 ID=cds-MHV1764247.1;Parent=gene-AC3ASX_00710;Dbxref=NCBI_GP:MHV1764247.1;Name=MHV1764247.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010030778.1;locus_tag=AC3ASX_00710;product=50S ribosomal protein L16;protein_id=MHV1764247.1;transl_table=11 JBYLIA010000001.1 Genbank gene 129325 129525 . + . ID=gene-AC3ASX_00715;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=AC3ASX_00715 JBYLIA010000001.1 Protein Homology CDS 129325 129525 . + 0 ID=cds-MHV1764248.1;Parent=gene-AC3ASX_00715;Dbxref=NCBI_GP:MHV1764248.1;Name=MHV1764248.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714336.1;locus_tag=AC3ASX_00715;product=50S ribosomal protein L29;protein_id=MHV1764248.1;transl_table=11 JBYLIA010000001.1 Genbank gene 129538 129789 . + . ID=gene-AC3ASX_00720;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=AC3ASX_00720 JBYLIA010000001.1 Protein Homology CDS 129538 129789 . + 0 ID=cds-MHV1764249.1;Parent=gene-AC3ASX_00720;Dbxref=NCBI_GP:MHV1764249.1;Name=MHV1764249.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017803.1;locus_tag=AC3ASX_00720;product=30S ribosomal protein S17;protein_id=MHV1764249.1;transl_table=11 JBYLIA010000001.1 Genbank gene 129881 130249 . + . ID=gene-AC3ASX_00725;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=AC3ASX_00725 JBYLIA010000001.1 Protein Homology CDS 129881 130249 . + 0 ID=cds-MHV1764250.1;Parent=gene-AC3ASX_00725;Dbxref=NCBI_GP:MHV1764250.1;Name=MHV1764250.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=AC3ASX_00725;product=50S ribosomal protein L14;protein_id=MHV1764250.1;transl_table=11 JBYLIA010000001.1 Genbank gene 130271 130588 . + . ID=gene-AC3ASX_00730;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=AC3ASX_00730 JBYLIA010000001.1 Protein Homology CDS 130271 130588 . + 0 ID=cds-MHV1764251.1;Parent=gene-AC3ASX_00730;Dbxref=NCBI_GP:MHV1764251.1;Name=MHV1764251.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014349.1;locus_tag=AC3ASX_00730;product=50S ribosomal protein L24;protein_id=MHV1764251.1;transl_table=11 JBYLIA010000001.1 Genbank gene 130600 131139 . + . ID=gene-AC3ASX_00735;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=AC3ASX_00735 JBYLIA010000001.1 Protein Homology CDS 130600 131139 . + 0 ID=cds-MHV1764252.1;Parent=gene-AC3ASX_00735;Dbxref=NCBI_GP:MHV1764252.1;Name=MHV1764252.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714340.1;locus_tag=AC3ASX_00735;product=50S ribosomal protein L5;protein_id=MHV1764252.1;transl_table=11 JBYLIA010000001.1 Genbank gene 131158 131463 . + . ID=gene-AC3ASX_00740;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=AC3ASX_00740 JBYLIA010000001.1 Protein Homology CDS 131158 131463 . + 0 ID=cds-MHV1764253.1;Parent=gene-AC3ASX_00740;Dbxref=NCBI_GP:MHV1764253.1;Name=MHV1764253.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014354.1;locus_tag=AC3ASX_00740;product=30S ribosomal protein S14;protein_id=MHV1764253.1;transl_table=11 JBYLIA010000001.1 Genbank gene 131480 131878 . + . ID=gene-AC3ASX_00745;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=AC3ASX_00745 JBYLIA010000001.1 Protein Homology CDS 131480 131878 . + 0 ID=cds-MHV1764254.1;Parent=gene-AC3ASX_00745;Dbxref=NCBI_GP:MHV1764254.1;Name=MHV1764254.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017806.1;locus_tag=AC3ASX_00745;product=30S ribosomal protein S8;protein_id=MHV1764254.1;transl_table=11 JBYLIA010000001.1 Genbank gene 131897 132433 . + . ID=gene-AC3ASX_00750;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=AC3ASX_00750 JBYLIA010000001.1 Protein Homology CDS 131897 132433 . + 0 ID=cds-MHV1764255.1;Parent=gene-AC3ASX_00750;Dbxref=NCBI_GP:MHV1764255.1;Name=MHV1764255.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429817.1;locus_tag=AC3ASX_00750;product=50S ribosomal protein L6;protein_id=MHV1764255.1;transl_table=11 JBYLIA010000001.1 Genbank gene 132455 132808 . + . ID=gene-AC3ASX_00755;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=AC3ASX_00755 JBYLIA010000001.1 Protein Homology CDS 132455 132808 . + 0 ID=cds-MHV1764256.1;Parent=gene-AC3ASX_00755;Dbxref=NCBI_GP:MHV1764256.1;Name=MHV1764256.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014360.1;locus_tag=AC3ASX_00755;product=50S ribosomal protein L18;protein_id=MHV1764256.1;transl_table=11 JBYLIA010000001.1 Genbank gene 132836 133336 . + . ID=gene-AC3ASX_00760;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=AC3ASX_00760 JBYLIA010000001.1 Protein Homology CDS 132836 133336 . + 0 ID=cds-MHV1764257.1;Parent=gene-AC3ASX_00760;Dbxref=NCBI_GP:MHV1764257.1;Name=MHV1764257.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021588.1;locus_tag=AC3ASX_00760;product=30S ribosomal protein S5;protein_id=MHV1764257.1;transl_table=11 JBYLIA010000001.1 Genbank gene 133343 133528 . + . ID=gene-AC3ASX_00765;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=AC3ASX_00765 JBYLIA010000001.1 Protein Homology CDS 133343 133528 . + 0 ID=cds-MHV1764258.1;Parent=gene-AC3ASX_00765;Dbxref=NCBI_GP:MHV1764258.1;Name=MHV1764258.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006459593.1;locus_tag=AC3ASX_00765;product=50S ribosomal protein L30;protein_id=MHV1764258.1;transl_table=11 JBYLIA010000001.1 Genbank gene 133535 133966 . + . ID=gene-AC3ASX_00770;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=AC3ASX_00770 JBYLIA010000001.1 Protein Homology CDS 133535 133966 . + 0 ID=cds-MHV1764259.1;Parent=gene-AC3ASX_00770;Dbxref=NCBI_GP:MHV1764259.1;Name=MHV1764259.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017812.1;locus_tag=AC3ASX_00770;product=50S ribosomal protein L15;protein_id=MHV1764259.1;transl_table=11 JBYLIA010000001.1 Genbank gene 133977 135302 . + . ID=gene-AC3ASX_00775;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=AC3ASX_00775 JBYLIA010000001.1 Protein Homology CDS 133977 135302 . + 0 ID=cds-MHV1764260.1;Parent=gene-AC3ASX_00775;Dbxref=NCBI_GP:MHV1764260.1;Name=MHV1764260.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714347.1;locus_tag=AC3ASX_00775;product=preprotein translocase subunit SecY;protein_id=MHV1764260.1;transl_table=11 JBYLIA010000001.1 Genbank gene 135326 135439 . + . ID=gene-AC3ASX_00780;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=AC3ASX_00780 JBYLIA010000001.1 Protein Homology CDS 135326 135439 . + 0 ID=cds-MHV1764261.1;Parent=gene-AC3ASX_00780;Dbxref=NCBI_GP:MHV1764261.1;Name=MHV1764261.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006232360.1;locus_tag=AC3ASX_00780;product=50S ribosomal protein L36;protein_id=MHV1764261.1;transl_table=11 JBYLIA010000001.1 Genbank gene 135553 135909 . + . ID=gene-AC3ASX_00785;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=AC3ASX_00785 JBYLIA010000001.1 Protein Homology CDS 135553 135909 . + 0 ID=cds-MHV1764262.1;Parent=gene-AC3ASX_00785;Dbxref=NCBI_GP:MHV1764262.1;Name=MHV1764262.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286596.1;locus_tag=AC3ASX_00785;product=30S ribosomal protein S13;protein_id=MHV1764262.1;transl_table=11 JBYLIA010000001.1 Genbank gene 135946 136335 . + . ID=gene-AC3ASX_00790;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=AC3ASX_00790 JBYLIA010000001.1 Protein Homology CDS 135946 136335 . + 0 ID=cds-MHV1764263.1;Parent=gene-AC3ASX_00790;Dbxref=NCBI_GP:MHV1764263.1;Name=MHV1764263.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010869057.1;locus_tag=AC3ASX_00790;product=30S ribosomal protein S11;protein_id=MHV1764263.1;transl_table=11 JBYLIA010000001.1 Genbank gene 136357 136977 . + . ID=gene-AC3ASX_00795;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=AC3ASX_00795 JBYLIA010000001.1 Protein Homology CDS 136357 136977 . + 0 ID=cds-MHV1764264.1;Parent=gene-AC3ASX_00795;Dbxref=NCBI_GP:MHV1764264.1;Name=MHV1764264.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003027183.1;locus_tag=AC3ASX_00795;product=30S ribosomal protein S4;protein_id=MHV1764264.1;transl_table=11 JBYLIA010000001.1 Genbank gene 137037 138008 . + . ID=gene-AC3ASX_00800;Name=AC3ASX_00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00800 JBYLIA010000001.1 Protein Homology CDS 137037 138008 . + 0 ID=cds-MHV1764265.1;Parent=gene-AC3ASX_00800;Dbxref=NCBI_GP:MHV1764265.1;Name=MHV1764265.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003043058.1;locus_tag=AC3ASX_00800;product=DNA-directed RNA polymerase subunit alpha;protein_id=MHV1764265.1;transl_table=11 JBYLIA010000001.1 Genbank gene 138053 138490 . + . ID=gene-AC3ASX_00805;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=AC3ASX_00805 JBYLIA010000001.1 Protein Homology CDS 138053 138490 . + 0 ID=cds-MHV1764266.1;Parent=gene-AC3ASX_00805;Dbxref=NCBI_GP:MHV1764266.1;Name=MHV1764266.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714352.1;locus_tag=AC3ASX_00805;product=50S ribosomal protein L17;protein_id=MHV1764266.1;transl_table=11 JBYLIA010000001.1 Genbank gene 138678 140564 . + . ID=gene-AC3ASX_00810;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=AC3ASX_00810 JBYLIA010000001.1 Protein Homology CDS 138678 140564 . + 0 ID=cds-MHV1764267.1;Parent=gene-AC3ASX_00810;Dbxref=NCBI_GP:MHV1764267.1;Name=MHV1764267.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014393.1;locus_tag=AC3ASX_00810;product=molecular chaperone HtpG;protein_id=MHV1764267.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 141006 141164 . - . ID=gene-AC3ASX_00815;Name=AC3ASX_00815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00815;pseudo=true JBYLIA010000001.1 Protein Homology CDS 141006 141164 . - 0 ID=cds-AC3ASX_00815;Parent=gene-AC3ASX_00815;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015563.7;locus_tag=AC3ASX_00815;product=putative basic amino acid antiporter YfcC;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 141187 141837 . - . ID=gene-AC3ASX_00820;Name=AC3ASX_00820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00820 JBYLIA010000001.1 Protein Homology CDS 141187 141837 . - 0 ID=cds-MHV1764268.1;Parent=gene-AC3ASX_00820;Dbxref=NCBI_GP:MHV1764268.1;Name=MHV1764268.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015563.7;locus_tag=AC3ASX_00820;product=transporter permease;protein_id=MHV1764268.1;transl_table=11 JBYLIA010000001.1 Genbank gene 141737 142033 . - . ID=gene-AC3ASX_00825;Name=AC3ASX_00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00825 JBYLIA010000001.1 Protein Homology CDS 141737 142033 . - 0 ID=cds-MHV1764269.1;Parent=gene-AC3ASX_00825;Dbxref=NCBI_GP:MHV1764269.1;Name=MHV1764269.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015563.7;locus_tag=AC3ASX_00825;product=hypothetical protein;protein_id=MHV1764269.1;transl_table=11 JBYLIA010000001.1 Genbank gene 141972 142166 . - . ID=gene-AC3ASX_00830;Name=AC3ASX_00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00830 JBYLIA010000001.1 Protein Homology CDS 141972 142166 . - 0 ID=cds-MHV1764270.1;Parent=gene-AC3ASX_00830;Dbxref=NCBI_GP:MHV1764270.1;Name=MHV1764270.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015563.7;locus_tag=AC3ASX_00830;product=hypothetical protein;protein_id=MHV1764270.1;transl_table=11 JBYLIA010000001.1 Genbank gene 142185 142355 . - . ID=gene-AC3ASX_00835;Name=AC3ASX_00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00835 JBYLIA010000001.1 GeneMarkS-2+ CDS 142185 142355 . - 0 ID=cds-MHV1764271.1;Parent=gene-AC3ASX_00835;Dbxref=NCBI_GP:MHV1764271.1;Name=MHV1764271.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_00835;product=hypothetical protein;protein_id=MHV1764271.1;transl_table=11 JBYLIA010000001.1 Genbank gene 142823 144463 . + . ID=gene-AC3ASX_00840;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=AC3ASX_00840 JBYLIA010000001.1 Protein Homology CDS 142823 144463 . + 0 ID=cds-MHV1764272.1;Parent=gene-AC3ASX_00840;Dbxref=NCBI_GP:MHV1764272.1;Name=MHV1764272.1;Ontology_term=GO:0006221,GO:0006241,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,CTP biosynthetic process|0006241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547578.1;locus_tag=AC3ASX_00840;product=CTP synthase;protein_id=MHV1764272.1;transl_table=11 JBYLIA010000001.1 Genbank gene 144536 144958 . + . ID=gene-AC3ASX_00845;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=AC3ASX_00845 JBYLIA010000001.1 Protein Homology CDS 144536 144958 . + 0 ID=cds-MHV1764273.1;Parent=gene-AC3ASX_00845;Dbxref=NCBI_GP:MHV1764273.1;Name=MHV1764273.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547579.1;locus_tag=AC3ASX_00845;product=nucleoside-diphosphate kinase;protein_id=MHV1764273.1;transl_table=11 JBYLIA010000001.1 Genbank gene 144998 145900 . + . ID=gene-AC3ASX_00850;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=AC3ASX_00850 JBYLIA010000001.1 Protein Homology CDS 144998 145900 . + 0 ID=cds-MHV1764274.1;Parent=gene-AC3ASX_00850;Dbxref=NCBI_GP:MHV1764274.1;Name=MHV1764274.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922056.1;locus_tag=AC3ASX_00850;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=MHV1764274.1;transl_table=11 JBYLIA010000001.1 Genbank gene 145917 147098 . + . ID=gene-AC3ASX_00855;Name=AC3ASX_00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00855 JBYLIA010000001.1 Protein Homology CDS 145917 147098 . + 0 ID=cds-MHV1764275.1;Parent=gene-AC3ASX_00855;Dbxref=NCBI_GP:MHV1764275.1;Name=MHV1764275.1;Ontology_term=GO:0006730,GO:0004326,GO:0005524,GO:0008841,GO:0046872;gbkey=CDS;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,dihydrofolate synthase activity|0008841||IEA,metal ion binding|0046872||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016487.1;locus_tag=AC3ASX_00855;product=bifunctional folylpolyglutamate synthase/dihydrofolate synthase;protein_id=MHV1764275.1;transl_table=11 JBYLIA010000001.1 Genbank gene 147076 147486 . + . ID=gene-AC3ASX_00860;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=AC3ASX_00860 JBYLIA010000001.1 Protein Homology CDS 147076 147486 . + 0 ID=cds-MHV1764276.1;Parent=gene-AC3ASX_00860;Dbxref=NCBI_GP:MHV1764276.1;Name=MHV1764276.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547582.1;locus_tag=AC3ASX_00860;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=MHV1764276.1;transl_table=11 JBYLIA010000001.1 Genbank gene 147571 148629 . + . ID=gene-AC3ASX_00865;Name=AC3ASX_00865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00865 JBYLIA010000001.1 Protein Homology CDS 147571 148629 . + 0 ID=cds-MHV1764277.1;Parent=gene-AC3ASX_00865;Dbxref=NCBI_GP:MHV1764277.1;Name=MHV1764277.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549308.1;locus_tag=AC3ASX_00865;product=tetratricopeptide repeat protein;protein_id=MHV1764277.1;transl_table=11 JBYLIA010000001.1 Genbank gene 148652 150196 . + . ID=gene-AC3ASX_00870;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=AC3ASX_00870 JBYLIA010000001.1 Protein Homology CDS 148652 150196 . + 0 ID=cds-MHV1764278.1;Parent=gene-AC3ASX_00870;Dbxref=NCBI_GP:MHV1764278.1;Name=MHV1764278.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714371.1;locus_tag=AC3ASX_00870;product=murein biosynthesis integral membrane protein MurJ;protein_id=MHV1764278.1;transl_table=11 JBYLIA010000001.1 Genbank gene 150246 151751 . + . ID=gene-AC3ASX_00875;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=AC3ASX_00875 JBYLIA010000001.1 Protein Homology CDS 150246 151751 . + 0 ID=cds-MHV1764279.1;Parent=gene-AC3ASX_00875;Dbxref=NCBI_GP:MHV1764279.1;Name=MHV1764279.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016477.1;locus_tag=AC3ASX_00875;product=glutamate--cysteine ligase;protein_id=MHV1764279.1;transl_table=11 JBYLIA010000001.1 Genbank gene 152213 152428 . - . ID=gene-AC3ASX_00880;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=AC3ASX_00880 JBYLIA010000001.1 Protein Homology CDS 152213 152428 . - 0 ID=cds-MHV1764280.1;Parent=gene-AC3ASX_00880;Dbxref=NCBI_GP:MHV1764280.1;Name=MHV1764280.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003027123.1;locus_tag=AC3ASX_00880;product=50S ribosomal protein L31;protein_id=MHV1764280.1;transl_table=11 JBYLIA010000001.1 Genbank gene 152549 153277 . - . ID=gene-AC3ASX_00885;Name=AC3ASX_00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00885 JBYLIA010000001.1 Protein Homology CDS 152549 153277 . - 0 ID=cds-MHV1764281.1;Parent=gene-AC3ASX_00885;Dbxref=NCBI_GP:MHV1764281.1;Name=MHV1764281.1;Ontology_term=GO:0004324;gbkey=CDS;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020049.1;locus_tag=AC3ASX_00885;product=ferredoxin--NADP reductase;protein_id=MHV1764281.1;transl_table=11 JBYLIA010000001.1 Genbank gene 153338 153532 . + . ID=gene-AC3ASX_00890;Name=AC3ASX_00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00890 JBYLIA010000001.1 GeneMarkS-2+ CDS 153338 153532 . + 0 ID=cds-MHV1764282.1;Parent=gene-AC3ASX_00890;Dbxref=NCBI_GP:MHV1764282.1;Name=MHV1764282.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_00890;product=hypothetical protein;protein_id=MHV1764282.1;transl_table=11 JBYLIA010000001.1 Genbank gene 153561 153637 . - . ID=gene-AC3ASX_00895;Name=AC3ASX_00895;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_00895 JBYLIA010000001.1 tRNAscan-SE tRNA 153561 153637 . - . ID=rna-AC3ASX_00895;Parent=gene-AC3ASX_00895;anticodon=(pos:complement(153601..153603));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_00895;product=tRNA-Met JBYLIA010000001.1 tRNAscan-SE exon 153561 153637 . - . ID=exon-AC3ASX_00895-1;Parent=rna-AC3ASX_00895;anticodon=(pos:complement(153601..153603));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_00895;product=tRNA-Met JBYLIA010000001.1 Genbank gene 153813 154487 . + . ID=gene-AC3ASX_00900;Name=AC3ASX_00900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00900 JBYLIA010000001.1 Protein Homology CDS 153813 154487 . + 0 ID=cds-MHV1764283.1;Parent=gene-AC3ASX_00900;Dbxref=NCBI_GP:MHV1764283.1;Name=MHV1764283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019568.1;locus_tag=AC3ASX_00900;product=ProQ/FINO family protein;protein_id=MHV1764283.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 154601 155081 . + . ID=gene-AC3ASX_00905;Name=AC3ASX_00905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00905;pseudo=true JBYLIA010000001.1 Protein Homology CDS 154601 155081 . + 0 ID=cds-AC3ASX_00905;Parent=gene-AC3ASX_00905;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922094.1;locus_tag=AC3ASX_00905;product=FTL_1709 family lipoprotein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 155087 156541 . - . ID=gene-AC3ASX_00910;Name=AC3ASX_00910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00910 JBYLIA010000001.1 Protein Homology CDS 155087 156541 . - 0 ID=cds-MHV1764284.1;Parent=gene-AC3ASX_00910;Dbxref=NCBI_GP:MHV1764284.1;Name=MHV1764284.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003032928.1;locus_tag=AC3ASX_00910;product=potassium transporter TrkG;protein_id=MHV1764284.1;transl_table=11 JBYLIA010000001.1 Genbank gene 156653 156856 . + . ID=gene-AC3ASX_00915;Name=AC3ASX_00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00915 JBYLIA010000001.1 Protein Homology CDS 156653 156856 . + 0 ID=cds-MHV1764285.1;Parent=gene-AC3ASX_00915;Dbxref=NCBI_GP:MHV1764285.1;Name=MHV1764285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019565.1;locus_tag=AC3ASX_00915;product=CBU_0585 family protein;protein_id=MHV1764285.1;transl_table=11 JBYLIA010000001.1 Genbank gene 157081 157659 . + . ID=gene-AC3ASX_00920;Name=AC3ASX_00920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00920 JBYLIA010000001.1 Protein Homology CDS 157081 157659 . + 0 ID=cds-MHV1764286.1;Parent=gene-AC3ASX_00920;Dbxref=NCBI_GP:MHV1764286.1;Name=MHV1764286.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039639.6;locus_tag=AC3ASX_00920;product=hypothetical protein;protein_id=MHV1764286.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 158914 159530 . - . ID=gene-AC3ASX_00925;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=pseudogene;locus_tag=AC3ASX_00925;pseudo=true JBYLIA010000001.1 Protein Homology CDS 158914 159530 . - 0 ID=cds-AC3ASX_00925;Parent=gene-AC3ASX_00925;Note=frameshifted;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038295.1;locus_tag=AC3ASX_00925;product=outer membrane lipoprotein periplasmic chaperone LolA;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 159531 162014 . - . ID=gene-AC3ASX_00930;Name=AC3ASX_00930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00930 JBYLIA010000001.1 Protein Homology CDS 159531 162014 . - 0 ID=cds-MHV1764287.1;Parent=gene-AC3ASX_00930;Dbxref=NCBI_GP:MHV1764287.1;Name=MHV1764287.1;Ontology_term=GO:0007059,GO:0051301,GO:0003677,GO:0005524,GO:0015616;gbkey=CDS;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,DNA translocase activity|0015616||IEA;go_process=chromosome segregation|0007059||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003043095.1;locus_tag=AC3ASX_00930;product=DNA translocase FtsK;protein_id=MHV1764287.1;transl_table=11 JBYLIA010000001.1 Genbank gene 162139 162807 . + . ID=gene-AC3ASX_00935;Name=lpxF;gbkey=Gene;gene=lpxF;gene_biotype=protein_coding;locus_tag=AC3ASX_00935 JBYLIA010000001.1 Protein Homology CDS 162139 162807 . + 0 ID=cds-MHV1764288.1;Parent=gene-AC3ASX_00935;Dbxref=NCBI_GP:MHV1764288.1;Name=MHV1764288.1;Ontology_term=GO:0009103,GO:0009245,GO:0016787;gbkey=CDS;gene=lpxF;go_function=hydrolase activity|0016787||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017156.1;locus_tag=AC3ASX_00935;product=lipid A 4'-phosphatase LpxF;protein_id=MHV1764288.1;transl_table=11 JBYLIA010000001.1 Genbank gene 163054 164502 . + . ID=gene-AC3ASX_00940;Name=AC3ASX_00940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00940 JBYLIA010000001.1 Protein Homology CDS 163054 164502 . + 0 ID=cds-MHV1764289.1;Parent=gene-AC3ASX_00940;Dbxref=NCBI_GP:MHV1764289.1;Name=MHV1764289.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011733593.1;locus_tag=AC3ASX_00940;product=amino acid permease;protein_id=MHV1764289.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 164508 165159 . + . ID=gene-AC3ASX_00945;Name=AC3ASX_00945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00945;pseudo=true JBYLIA010000001.1 Protein Homology CDS 164508 165159 . + 0 ID=cds-AC3ASX_00945;Parent=gene-AC3ASX_00945;Note=frameshifted%3B internal stop;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017154.1;locus_tag=AC3ASX_00945;product=alpha/beta hydrolase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 165179 166165 . + . ID=gene-AC3ASX_00950;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=AC3ASX_00950 JBYLIA010000001.1 Protein Homology CDS 165179 166165 . + 0 ID=cds-MHV1764290.1;Parent=gene-AC3ASX_00950;Dbxref=NCBI_GP:MHV1764290.1;Name=MHV1764290.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022558.1;locus_tag=AC3ASX_00950;product=class II fructose-bisphosphatase;protein_id=MHV1764290.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 166463 167932 . + . ID=gene-AC3ASX_00955;Name=putP;gbkey=Gene;gene=putP;gene_biotype=pseudogene;locus_tag=AC3ASX_00955;pseudo=true JBYLIA010000001.1 Protein Homology CDS 166463 167932 . + 0 ID=cds-AC3ASX_00955;Parent=gene-AC3ASX_00955;Note=frameshifted%3B internal stop;Ontology_term=GO:0006814,GO:0015824,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286557.1;locus_tag=AC3ASX_00955;product=sodium/proline symporter PutP;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 167997 169676 . + . ID=gene-AC3ASX_00960;Name=AC3ASX_00960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00960 JBYLIA010000001.1 Protein Homology CDS 167997 169676 . + 0 ID=cds-MHV1764291.1;Parent=gene-AC3ASX_00960;Dbxref=NCBI_GP:MHV1764291.1;Name=MHV1764291.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012279998.1;locus_tag=AC3ASX_00960;product=glycosyltransferase family 2 protein;protein_id=MHV1764291.1;transl_table=11 JBYLIA010000001.1 Genbank gene 170418 170621 . + . ID=gene-AC3ASX_00965;Name=AC3ASX_00965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00965 JBYLIA010000001.1 Protein Homology CDS 170418 170621 . + 0 ID=cds-MHV1764292.1;Parent=gene-AC3ASX_00965;Dbxref=NCBI_GP:MHV1764292.1;Name=MHV1764292.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019575.7;locus_tag=AC3ASX_00965;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=MHV1764292.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 171204 172076 . + . ID=gene-AC3ASX_00970;Name=AC3ASX_00970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00970;pseudo=true JBYLIA010000001.1 Protein Homology CDS 171204 172076 . + 0 ID=cds-AC3ASX_00970;Parent=gene-AC3ASX_00970;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012279991.1;locus_tag=AC3ASX_00970;product=photosystem I protein M (PsaM);pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 172216 172479 . + . ID=gene-AC3ASX_00975;Name=AC3ASX_00975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_00975 JBYLIA010000001.1 GeneMarkS-2+ CDS 172216 172479 . + 0 ID=cds-MHV1764293.1;Parent=gene-AC3ASX_00975;Dbxref=NCBI_GP:MHV1764293.1;Name=MHV1764293.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_00975;product=hypothetical protein;protein_id=MHV1764293.1;transl_table=11 JBYLIA010000001.1 Genbank gene 173877 175256 . + . ID=gene-AC3ASX_00980;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=AC3ASX_00980 JBYLIA010000001.1 Protein Homology CDS 173877 175256 . + 0 ID=cds-MHV1764294.1;Parent=gene-AC3ASX_00980;Dbxref=NCBI_GP:MHV1764294.1;Name=MHV1764294.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922115.1;locus_tag=AC3ASX_00980;product=cysteine--tRNA ligase;protein_id=MHV1764294.1;transl_table=11 JBYLIA010000001.1 Genbank gene 175260 176204 . + . ID=gene-AC3ASX_00985;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=AC3ASX_00985 JBYLIA010000001.1 Protein Homology CDS 175260 176204 . + 0 ID=cds-MHV1764295.1;Parent=gene-AC3ASX_00985;Dbxref=NCBI_GP:MHV1764295.1;Name=MHV1764295.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547613.1;locus_tag=AC3ASX_00985;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=MHV1764295.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 176340 177410 . + . ID=gene-AC3ASX_00990;Name=AC3ASX_00990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00990;pseudo=true JBYLIA010000001.1 Protein Homology CDS 176340 177410 . + 0 ID=cds-AC3ASX_00990;Parent=gene-AC3ASX_00990;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003032953.1;locus_tag=AC3ASX_00990;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 177842 179107 . - . ID=gene-AC3ASX_00995;Name=AC3ASX_00995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_00995;pseudo=true JBYLIA010000001.1 Protein Homology CDS 177842 179107 . - 0 ID=cds-AC3ASX_00995;Parent=gene-AC3ASX_00995;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003032962.1;locus_tag=AC3ASX_00995;product=amino acid permease;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 179519 180186 . - . ID=gene-AC3ASX_01000;Name=AC3ASX_01000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01000;pseudo=true JBYLIA010000001.1 Protein Homology CDS 179519 180186 . - 0 ID=cds-AC3ASX_01000;Parent=gene-AC3ASX_01000;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429156.1;locus_tag=AC3ASX_01000;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 180189 180884 . - . ID=gene-AC3ASX_01005;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=AC3ASX_01005 JBYLIA010000001.1 Protein Homology CDS 180189 180884 . - 0 ID=cds-MHV1764296.1;Parent=gene-AC3ASX_01005;Dbxref=NCBI_GP:MHV1764296.1;Name=MHV1764296.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038326.1;locus_tag=AC3ASX_01005;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=MHV1764296.1;transl_table=11 JBYLIA010000001.1 Genbank gene 181028 182131 . + . ID=gene-AC3ASX_01010;Name=AC3ASX_01010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01010 JBYLIA010000001.1 Protein Homology CDS 181028 182131 . + 0 ID=cds-MHV1764297.1;Parent=gene-AC3ASX_01010;Dbxref=NCBI_GP:MHV1764297.1;Name=MHV1764297.1;Ontology_term=GO:0120010,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=intermembrane phospholipid transfer|0120010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429158.1;locus_tag=AC3ASX_01010;product=MlaA family lipoprotein;protein_id=MHV1764297.1;transl_table=11 JBYLIA010000001.1 Genbank gene 182267 182503 . - . ID=gene-AC3ASX_01015;Name=AC3ASX_01015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01015 JBYLIA010000001.1 Protein Homology CDS 182267 182503 . - 0 ID=cds-MHV1764298.1;Parent=gene-AC3ASX_01015;Dbxref=NCBI_GP:MHV1764298.1;Name=MHV1764298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022536.1;locus_tag=AC3ASX_01015;product=BolA/IbaG family iron-sulfur metabolism protein;protein_id=MHV1764298.1;transl_table=11 JBYLIA010000001.1 Genbank gene 182520 182813 . - . ID=gene-AC3ASX_01020;Name=AC3ASX_01020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01020 JBYLIA010000001.1 Protein Homology CDS 182520 182813 . - 0 ID=cds-MHV1764299.1;Parent=gene-AC3ASX_01020;Dbxref=NCBI_GP:MHV1764299.1;Name=MHV1764299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035467.1;locus_tag=AC3ASX_01020;product=STAS domain-containing protein;protein_id=MHV1764299.1;transl_table=11 JBYLIA010000001.1 Genbank gene 182810 183475 . - . ID=gene-AC3ASX_01025;Name=AC3ASX_01025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01025 JBYLIA010000001.1 Protein Homology CDS 182810 183475 . - 0 ID=cds-MHV1764300.1;Parent=gene-AC3ASX_01025;Dbxref=NCBI_GP:MHV1764300.1;Name=MHV1764300.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286526.1;locus_tag=AC3ASX_01025;product=MlaC/ttg2D family ABC transporter substrate-binding protein;protein_id=MHV1764300.1;transl_table=11 JBYLIA010000001.1 Genbank gene 183549 184082 . - . ID=gene-AC3ASX_01030;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=AC3ASX_01030 JBYLIA010000001.1 Protein Homology CDS 183549 184082 . - 0 ID=cds-MHV1764301.1;Parent=gene-AC3ASX_01030;Dbxref=NCBI_GP:MHV1764301.1;Name=MHV1764301.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022532.1;locus_tag=AC3ASX_01030;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=MHV1764301.1;transl_table=11 JBYLIA010000001.1 Genbank gene 184082 184846 . - . ID=gene-AC3ASX_01035;Name=AC3ASX_01035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01035 JBYLIA010000001.1 Protein Homology CDS 184082 184846 . - 0 ID=cds-MHV1764302.1;Parent=gene-AC3ASX_01035;Dbxref=NCBI_GP:MHV1764302.1;Name=MHV1764302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022530.1;locus_tag=AC3ASX_01035;product=MlaE family lipid ABC transporter permease subunit;protein_id=MHV1764302.1;transl_table=11 JBYLIA010000001.1 Genbank gene 184850 185653 . - . ID=gene-AC3ASX_01040;Name=AC3ASX_01040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01040 JBYLIA010000001.1 Protein Homology CDS 184850 185653 . - 0 ID=cds-MHV1764303.1;Parent=gene-AC3ASX_01040;Dbxref=NCBI_GP:MHV1764303.1;Name=MHV1764303.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429177.1;locus_tag=AC3ASX_01040;product=ABC transporter ATP-binding protein;protein_id=MHV1764303.1;transl_table=11 JBYLIA010000001.1 Genbank gene 185668 185940 . - . ID=gene-AC3ASX_01045;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=AC3ASX_01045 JBYLIA010000001.1 Protein Homology CDS 185668 185940 . - 0 ID=cds-MHV1764304.1;Parent=gene-AC3ASX_01045;Dbxref=NCBI_GP:MHV1764304.1;Name=MHV1764304.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286522.1;locus_tag=AC3ASX_01045;product=cell division topological specificity factor MinE;protein_id=MHV1764304.1;transl_table=11 JBYLIA010000001.1 Genbank gene 185942 186766 . - . ID=gene-AC3ASX_01050;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=AC3ASX_01050 JBYLIA010000001.1 Protein Homology CDS 185942 186766 . - 0 ID=cds-MHV1764305.1;Parent=gene-AC3ASX_01050;Dbxref=NCBI_GP:MHV1764305.1;Name=MHV1764305.1;Ontology_term=GO:0000918,GO:0016887;gbkey=CDS;gene=minD;go_function=ATP hydrolysis activity|0016887||IEA;go_process=division septum site selection|0000918||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035475.1;locus_tag=AC3ASX_01050;product=septum site-determining protein MinD;protein_id=MHV1764305.1;transl_table=11 JBYLIA010000001.1 Genbank gene 186805 187491 . - . ID=gene-AC3ASX_01055;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=AC3ASX_01055 JBYLIA010000001.1 Protein Homology CDS 186805 187491 . - 0 ID=cds-MHV1764306.1;Parent=gene-AC3ASX_01055;Dbxref=NCBI_GP:MHV1764306.1;Name=MHV1764306.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547627.1;locus_tag=AC3ASX_01055;product=septum site-determining protein MinC;protein_id=MHV1764306.1;transl_table=11 JBYLIA010000001.1 Genbank gene 187527 187682 . - . ID=gene-AC3ASX_01060;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=AC3ASX_01060 JBYLIA010000001.1 Protein Homology CDS 187527 187682 . - 0 ID=cds-MHV1764307.1;Parent=gene-AC3ASX_01060;Dbxref=NCBI_GP:MHV1764307.1;Name=MHV1764307.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009766925.1;locus_tag=AC3ASX_01060;product=50S ribosomal protein L33;protein_id=MHV1764307.1;transl_table=11 JBYLIA010000001.1 Genbank gene 187706 187942 . - . ID=gene-AC3ASX_01065;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=AC3ASX_01065 JBYLIA010000001.1 Protein Homology CDS 187706 187942 . - 0 ID=cds-MHV1764308.1;Parent=gene-AC3ASX_01065;Dbxref=NCBI_GP:MHV1764308.1;Name=MHV1764308.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547628.1;locus_tag=AC3ASX_01065;product=50S ribosomal protein L28;protein_id=MHV1764308.1;transl_table=11 JBYLIA010000001.1 Genbank gene 188076 188417 . - . ID=gene-AC3ASX_01070;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=AC3ASX_01070 JBYLIA010000001.1 Protein Homology CDS 188076 188417 . - 0 ID=cds-MHV1764309.1;Parent=gene-AC3ASX_01070;Dbxref=NCBI_GP:MHV1764309.1;Name=MHV1764309.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549342.1;locus_tag=AC3ASX_01070;product=LPS translocon maturation chaperone LptM;protein_id=MHV1764309.1;transl_table=11 JBYLIA010000001.1 Genbank gene 188549 190588 . + . ID=gene-AC3ASX_01075;Name=AC3ASX_01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01075 JBYLIA010000001.1 Protein Homology CDS 188549 190588 . + 0 ID=cds-MHV1764310.1;Parent=gene-AC3ASX_01075;Dbxref=NCBI_GP:MHV1764310.1;Name=MHV1764310.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0003678,GO:0005524,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549343.1;locus_tag=AC3ASX_01075;product=ATP-dependent DNA helicase RecG;protein_id=MHV1764310.1;transl_table=11 JBYLIA010000001.1 Genbank gene 190862 191092 . + . ID=gene-AC3ASX_01080;Name=AC3ASX_01080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01080 JBYLIA010000001.1 GeneMarkS-2+ CDS 190862 191092 . + 0 ID=cds-MHV1764311.1;Parent=gene-AC3ASX_01080;Dbxref=NCBI_GP:MHV1764311.1;Name=MHV1764311.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_01080;product=hypothetical protein;protein_id=MHV1764311.1;transl_table=11 JBYLIA010000001.1 Genbank gene 191272 191589 . + . ID=gene-AC3ASX_01085;Name=AC3ASX_01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01085 JBYLIA010000001.1 GeneMarkS-2+ CDS 191272 191589 . + 0 ID=cds-MHV1764312.1;Parent=gene-AC3ASX_01085;Dbxref=NCBI_GP:MHV1764312.1;Name=MHV1764312.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_01085;product=hypothetical protein;protein_id=MHV1764312.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 191838 193356 . + . ID=gene-AC3ASX_01090;Name=AC3ASX_01090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01090;pseudo=true JBYLIA010000001.1 Protein Homology CDS 191838 193356 . + 0 ID=cds-AC3ASX_01090;Parent=gene-AC3ASX_01090;Note=frameshifted;Ontology_term=GO:0006091,GO:0006099,GO:0004333,GO:0046872,GO:0051539;gbkey=CDS;go_function=fumarate hydratase activity|0004333||IEA,metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=generation of precursor metabolites and energy|0006091||IEA,tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714415.1;locus_tag=AC3ASX_01090;product=fumarate hydratase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 193770 194372 . + . ID=gene-AC3ASX_01095;Name=AC3ASX_01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01095 JBYLIA010000001.1 Protein Homology CDS 193770 194372 . + 0 ID=cds-MHV1764313.1;Parent=gene-AC3ASX_01095;Dbxref=NCBI_GP:MHV1764313.1;Name=MHV1764313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020762.1;locus_tag=AC3ASX_01095;product=NUDIX hydrolase N-terminal domain-containing protein;protein_id=MHV1764313.1;transl_table=11 JBYLIA010000001.1 Genbank gene 194390 194743 . + . ID=gene-AC3ASX_01100;Name=AC3ASX_01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01100 JBYLIA010000001.1 Protein Homology CDS 194390 194743 . + 0 ID=cds-MHV1764314.1;Parent=gene-AC3ASX_01100;Dbxref=NCBI_GP:MHV1764314.1;Name=MHV1764314.1;Ontology_term=GO:0030611;gbkey=CDS;go_function=arsenate reductase activity|0030611||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547635.1;locus_tag=AC3ASX_01100;product=arsenate reductase family protein;protein_id=MHV1764314.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 194771 195103 . - . ID=gene-AC3ASX_01105;Name=AC3ASX_01105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01105;pseudo=true JBYLIA010000001.1 Protein Homology CDS 194771 195103 . - 0 ID=cds-AC3ASX_01105;Parent=gene-AC3ASX_01105;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547636.1;locus_tag=AC3ASX_01105;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 195279 195501 . - . ID=gene-AC3ASX_01110;Name=AC3ASX_01110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01110;pseudo=true JBYLIA010000001.1 Protein Homology CDS 195279 195501 . - 0 ID=cds-AC3ASX_01110;Parent=gene-AC3ASX_01110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020767.1;locus_tag=AC3ASX_01110;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 195610 196906 . - . ID=gene-AC3ASX_01115;Name=AC3ASX_01115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01115;pseudo=true JBYLIA010000001.1 Protein Homology CDS 195610 196906 . - 0 ID=cds-AC3ASX_01115;Parent=gene-AC3ASX_01115;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014504.1;locus_tag=AC3ASX_01115;product=solute carrier family 23 protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 197444 197638 . + . ID=gene-AC3ASX_01120;Name=AC3ASX_01120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01120 JBYLIA010000001.1 GeneMarkS-2+ CDS 197444 197638 . + 0 ID=cds-MHV1764315.1;Parent=gene-AC3ASX_01120;Dbxref=NCBI_GP:MHV1764315.1;Name=MHV1764315.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_01120;product=hypothetical protein;protein_id=MHV1764315.1;transl_table=11 JBYLIA010000001.1 Genbank gene 198092 198352 . - . ID=gene-AC3ASX_01125;Name=AC3ASX_01125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01125 JBYLIA010000001.1 Protein Homology CDS 198092 198352 . - 0 ID=cds-MHV1764316.1;Parent=gene-AC3ASX_01125;Dbxref=NCBI_GP:MHV1764316.1;Name=MHV1764316.1;Ontology_term=GO:0009294;gbkey=CDS;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: protein motif:HMM:NF014533.8;locus_tag=AC3ASX_01125;product=DNA-processing protein DprA;protein_id=MHV1764316.1;transl_table=11 JBYLIA010000001.1 Genbank gene 198402 198608 . - . ID=gene-AC3ASX_01130;Name=AC3ASX_01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01130 JBYLIA010000001.1 Protein Homology CDS 198402 198608 . - 0 ID=cds-MHV1764317.1;Parent=gene-AC3ASX_01130;Dbxref=NCBI_GP:MHV1764317.1;Name=MHV1764317.1;Ontology_term=GO:0009294;gbkey=CDS;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: protein motif:HMM:NF014533.8;locus_tag=AC3ASX_01130;product=DNA-processing protein DprA;protein_id=MHV1764317.1;transl_table=11 JBYLIA010000001.1 Genbank gene 198748 198969 . - . ID=gene-AC3ASX_01135;Name=AC3ASX_01135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01135 JBYLIA010000001.1 GeneMarkS-2+ CDS 198748 198969 . - 0 ID=cds-MHV1764318.1;Parent=gene-AC3ASX_01135;Dbxref=NCBI_GP:MHV1764318.1;Name=MHV1764318.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_01135;product=hypothetical protein;protein_id=MHV1764318.1;transl_table=11 JBYLIA010000001.1 Genbank gene 198969 200225 . - . ID=gene-AC3ASX_01140;Name=AC3ASX_01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01140 JBYLIA010000001.1 Protein Homology CDS 198969 200225 . - 0 ID=cds-MHV1764319.1;Parent=gene-AC3ASX_01140;Dbxref=NCBI_GP:MHV1764319.1;Name=MHV1764319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018363.1;locus_tag=AC3ASX_01140;product=OmpA family protein;protein_id=MHV1764319.1;transl_table=11 JBYLIA010000001.1 Genbank gene 200414 200878 . + . ID=gene-AC3ASX_01145;Name=AC3ASX_01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01145 JBYLIA010000001.1 Protein Homology CDS 200414 200878 . + 0 ID=cds-MHV1764320.1;Parent=gene-AC3ASX_01145;Dbxref=NCBI_GP:MHV1764320.1;Name=MHV1764320.1;Ontology_term=GO:0006457,GO:0003755,GO:0046872;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,metal ion binding|0046872||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547643.1;locus_tag=AC3ASX_01145;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=MHV1764320.1;transl_table=11 JBYLIA010000001.1 Genbank gene 200859 201821 . + . ID=gene-AC3ASX_01150;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=AC3ASX_01150 JBYLIA010000001.1 Protein Homology CDS 200859 201821 . + 0 ID=cds-MHV1764321.1;Parent=gene-AC3ASX_01150;Dbxref=NCBI_GP:MHV1764321.1;Name=MHV1764321.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018366.1;locus_tag=AC3ASX_01150;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=MHV1764321.1;transl_table=11 JBYLIA010000001.1 Genbank gene 201823 202194 . + . ID=gene-AC3ASX_01155;Name=aroH;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=AC3ASX_01155 JBYLIA010000001.1 Protein Homology CDS 201823 202194 . + 0 ID=cds-MHV1764322.1;Parent=gene-AC3ASX_01155;Dbxref=NCBI_GP:MHV1764322.1;Name=MHV1764322.1;Ontology_term=GO:0009073,GO:0004106;gbkey=CDS;gene=aroH;go_function=chorismate mutase activity|0004106||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004336791.1;locus_tag=AC3ASX_01155;product=chorismate mutase;protein_id=MHV1764322.1;transl_table=11 JBYLIA010000001.1 Genbank gene 202201 203016 . + . ID=gene-AC3ASX_01160;Name=AC3ASX_01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01160 JBYLIA010000001.1 Protein Homology CDS 202201 203016 . + 0 ID=cds-MHV1764323.1;Parent=gene-AC3ASX_01160;Dbxref=NCBI_GP:MHV1764323.1;Name=MHV1764323.1;Ontology_term=GO:0008654,GO:0016780;gbkey=CDS;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014367942.1;locus_tag=AC3ASX_01160;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=MHV1764323.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 203026 203221 . - . ID=gene-AC3ASX_01165;Name=AC3ASX_01165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01165;pseudo=true JBYLIA010000001.1 Protein Homology CDS 203026 203221 . - 0 ID=cds-AC3ASX_01165;Parent=gene-AC3ASX_01165;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004336793.1;locus_tag=AC3ASX_01165;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 203406 204113 . + . ID=gene-AC3ASX_01170;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=AC3ASX_01170 JBYLIA010000001.1 Protein Homology CDS 203406 204113 . + 0 ID=cds-MHV1764324.1;Parent=gene-AC3ASX_01170;Dbxref=NCBI_GP:MHV1764324.1;Name=MHV1764324.1;Ontology_term=GO:0043213,GO:0016020;gbkey=CDS;gene=tolQ;go_component=membrane|0016020||IEA;go_process=bacteriocin transport|0043213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429234.1;locus_tag=AC3ASX_01170;product=protein TolQ;protein_id=MHV1764324.1;transl_table=11 JBYLIA010000001.1 Genbank gene 204129 204569 . + . ID=gene-AC3ASX_01175;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=AC3ASX_01175 JBYLIA010000001.1 Protein Homology CDS 204129 204569 . + 0 ID=cds-MHV1764325.1;Parent=gene-AC3ASX_01175;Dbxref=NCBI_GP:MHV1764325.1;Name=MHV1764325.1;Ontology_term=GO:0061024,GO:1902600,GO:0015078,GO:0098567;gbkey=CDS;gene=tolR;go_component=periplasmic side of plasma membrane|0098567||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=membrane organization|0061024||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714427.1;locus_tag=AC3ASX_01175;product=protein TolR;protein_id=MHV1764325.1;transl_table=11 JBYLIA010000001.1 Genbank gene 204556 205389 . + . ID=gene-AC3ASX_01180;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=AC3ASX_01180 JBYLIA010000001.1 Protein Homology CDS 204556 205389 . + 0 ID=cds-MHV1764326.1;Parent=gene-AC3ASX_01180;Dbxref=NCBI_GP:MHV1764326.1;Name=MHV1764326.1;Ontology_term=GO:0006810,GO:0005215,GO:0098567;gbkey=CDS;gene=tolA;go_component=periplasmic side of plasma membrane|0098567||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549354.1;locus_tag=AC3ASX_01180;product=cell envelope integrity protein TolA;protein_id=MHV1764326.1;transl_table=11 JBYLIA010000001.1 Genbank gene 205401 206708 . + . ID=gene-AC3ASX_01185;Name=AC3ASX_01185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01185 JBYLIA010000001.1 Protein Homology CDS 205401 206708 . + 0 ID=cds-MHV1764327.1;Parent=gene-AC3ASX_01185;Dbxref=NCBI_GP:MHV1764327.1;Name=MHV1764327.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004336796.1;locus_tag=AC3ASX_01185;product=translocation protein TolB;protein_id=MHV1764327.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 206718 206961 . + . ID=gene-AC3ASX_01190;Name=AC3ASX_01190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01190;pseudo=true JBYLIA010000001.1 Protein Homology CDS 206718 206961 . + 0 ID=cds-AC3ASX_01190;Parent=gene-AC3ASX_01190;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026577.1;locus_tag=AC3ASX_01190;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 206981 207619 . + . ID=gene-AC3ASX_01195;Name=AC3ASX_01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01195 JBYLIA010000001.1 Protein Homology CDS 206981 207619 . + 0 ID=cds-MHV1764328.1;Parent=gene-AC3ASX_01195;Dbxref=NCBI_GP:MHV1764328.1;Name=MHV1764328.1;Ontology_term=GO:0015288,GO:0042834,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020808.1;locus_tag=AC3ASX_01195;product=OmpA family protein;protein_id=MHV1764328.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 207713 209034 . + . ID=gene-AC3ASX_01200;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=pseudogene;locus_tag=AC3ASX_01200;pseudo=true JBYLIA010000001.1 Protein Homology CDS 207713 209034 . + 0 ID=cds-AC3ASX_01200;Parent=gene-AC3ASX_01200;Note=frameshifted;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038377.1;locus_tag=AC3ASX_01200;product=30S ribosomal protein S12 methylthiotransferase RimO;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 209853 210082 . + . ID=gene-AC3ASX_01205;Name=AC3ASX_01205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01205;pseudo=true JBYLIA010000001.1 Protein Homology CDS 209853 210082 . + 0 ID=cds-AC3ASX_01205;Parent=gene-AC3ASX_01205;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003030738.1;locus_tag=AC3ASX_01205;product=DUF2805 domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 210063 211320 . + . ID=gene-AC3ASX_01210;Name=AC3ASX_01210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01210;pseudo=true JBYLIA010000001.1 Protein Homology CDS 210063 211320 . + 0 ID=cds-AC3ASX_01210;Parent=gene-AC3ASX_01210;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031538.1;locus_tag=AC3ASX_01210;product=FAD-binding domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 211626 211838 . + . ID=gene-AC3ASX_01215;Name=AC3ASX_01215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01215 JBYLIA010000001.1 Protein Homology CDS 211626 211838 . + 0 ID=cds-MHV1764329.1;Parent=gene-AC3ASX_01215;Dbxref=NCBI_GP:MHV1764329.1;Name=MHV1764329.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016158.7;locus_tag=AC3ASX_01215;product=cryptochrome/photolyase family protein;protein_id=MHV1764329.1;transl_table=11 JBYLIA010000001.1 Genbank gene 211828 212010 . + . ID=gene-AC3ASX_01220;Name=AC3ASX_01220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01220 JBYLIA010000001.1 Protein Homology CDS 211828 212010 . + 0 ID=cds-MHV1764330.1;Parent=gene-AC3ASX_01220;Dbxref=NCBI_GP:MHV1764330.1;Name=MHV1764330.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016158.7;locus_tag=AC3ASX_01220;product=cryptochrome/photolyase family protein;protein_id=MHV1764330.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 212428 212893 . + . ID=gene-AC3ASX_01225;Name=AC3ASX_01225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01225;pseudo=true JBYLIA010000001.1 Protein Homology CDS 212428 212893 . + 0 ID=cds-AC3ASX_01225;Parent=gene-AC3ASX_01225;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018381.1;locus_tag=AC3ASX_01225;product=sulfite exporter TauE/SafE family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 212938 213027 . + . ID=gene-AC3ASX_01230;Name=AC3ASX_01230;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_01230 JBYLIA010000001.1 tRNAscan-SE tRNA 212938 213027 . + . ID=rna-AC3ASX_01230;Parent=gene-AC3ASX_01230;anticodon=(pos:212972..212974);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_01230;product=tRNA-Ser JBYLIA010000001.1 tRNAscan-SE exon 212938 213027 . + . ID=exon-AC3ASX_01230-1;Parent=rna-AC3ASX_01230;anticodon=(pos:212972..212974);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_01230;product=tRNA-Ser JBYLIA010000001.1 Genbank pseudogene 213113 213902 . + . ID=gene-AC3ASX_01235;Name=AC3ASX_01235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01235;pseudo=true JBYLIA010000001.1 Protein Homology CDS 213113 213902 . + 0 ID=cds-AC3ASX_01235;Parent=gene-AC3ASX_01235;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006810,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018383.1;locus_tag=AC3ASX_01235;product=ArsB/NhaD family transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 214563 215420 . - . ID=gene-AC3ASX_01240;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=AC3ASX_01240 JBYLIA010000001.1 Protein Homology CDS 214563 215420 . - 0 ID=cds-MHV1764331.1;Parent=gene-AC3ASX_01240;Dbxref=NCBI_GP:MHV1764331.1;Name=MHV1764331.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003041639.1;locus_tag=AC3ASX_01240;product=4-hydroxybenzoate octaprenyltransferase;protein_id=MHV1764331.1;transl_table=11 JBYLIA010000001.1 Genbank gene 215423 215929 . - . ID=gene-AC3ASX_01245;Name=AC3ASX_01245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01245 JBYLIA010000001.1 Protein Homology CDS 215423 215929 . - 0 ID=cds-MHV1764332.1;Parent=gene-AC3ASX_01245;Dbxref=NCBI_GP:MHV1764332.1;Name=MHV1764332.1;Ontology_term=GO:0006744,GO:0008813,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=chorismate lyase activity|0008813||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018386.1;locus_tag=AC3ASX_01245;product=chorismate--pyruvate lyase family protein;protein_id=MHV1764332.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 216028 216738 . + . ID=gene-AC3ASX_01250;Name=rph;gbkey=Gene;gene=rph;gene_biotype=pseudogene;locus_tag=AC3ASX_01250;pseudo=true JBYLIA010000001.1 Protein Homology CDS 216028 216738 . + 0 ID=cds-AC3ASX_01250;Parent=gene-AC3ASX_01250;Note=frameshifted%3B internal stop;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549369.1;locus_tag=AC3ASX_01250;product=ribonuclease PH;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 216786 217109 . - . ID=gene-AC3ASX_01255;Name=AC3ASX_01255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01255 JBYLIA010000001.1 Protein Homology CDS 216786 217109 . - 0 ID=cds-MHV1764333.1;Parent=gene-AC3ASX_01255;Dbxref=NCBI_GP:MHV1764333.1;Name=MHV1764333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429249.1;locus_tag=AC3ASX_01255;product=hypothetical protein;protein_id=MHV1764333.1;transl_table=11 JBYLIA010000001.1 Genbank gene 217346 217651 . - . ID=gene-AC3ASX_01260;Name=AC3ASX_01260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01260 JBYLIA010000001.1 GeneMarkS-2+ CDS 217346 217651 . - 0 ID=cds-MHV1764334.1;Parent=gene-AC3ASX_01260;Dbxref=NCBI_GP:MHV1764334.1;Name=MHV1764334.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_01260;product=hypothetical protein;protein_id=MHV1764334.1;transl_table=11 JBYLIA010000001.1 Genbank gene 217665 217976 . - . ID=gene-AC3ASX_01265;Name=AC3ASX_01265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01265 JBYLIA010000001.1 GeneMarkS-2+ CDS 217665 217976 . - 0 ID=cds-MHV1764335.1;Parent=gene-AC3ASX_01265;Dbxref=NCBI_GP:MHV1764335.1;Name=MHV1764335.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_01265;product=hypothetical protein;protein_id=MHV1764335.1;transl_table=11 JBYLIA010000001.1 Genbank gene 217964 218176 . - . ID=gene-AC3ASX_01270;Name=AC3ASX_01270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01270 JBYLIA010000001.1 Protein Homology CDS 217964 218176 . - 0 ID=cds-MHV1764336.1;Parent=gene-AC3ASX_01270;Dbxref=NCBI_GP:MHV1764336.1;Name=MHV1764336.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:TIGR02532.1;locus_tag=AC3ASX_01270;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;protein_id=MHV1764336.1;transl_table=11 JBYLIA010000001.1 Genbank gene 218256 219323 . - . ID=gene-AC3ASX_01275;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=AC3ASX_01275 JBYLIA010000001.1 Protein Homology CDS 218256 219323 . - 0 ID=cds-MHV1764337.1;Parent=gene-AC3ASX_01275;Dbxref=NCBI_GP:MHV1764337.1;Name=MHV1764337.1;gbkey=CDS;gene=htpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014558.1;locus_tag=AC3ASX_01275;product=zinc metalloprotease HtpX;protein_id=MHV1764337.1;transl_table=11 JBYLIA010000001.1 Genbank gene 219327 219902 . - . ID=gene-AC3ASX_01280;Name=AC3ASX_01280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01280 JBYLIA010000001.1 Protein Homology CDS 219327 219902 . - 0 ID=cds-MHV1764338.1;Parent=gene-AC3ASX_01280;Dbxref=NCBI_GP:MHV1764338.1;Name=MHV1764338.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714465.1;locus_tag=AC3ASX_01280;product=LemA family protein;protein_id=MHV1764338.1;transl_table=11 JBYLIA010000001.1 Genbank gene 220296 220529 . - . ID=gene-AC3ASX_01285;Name=AC3ASX_01285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01285 JBYLIA010000001.1 Protein Homology CDS 220296 220529 . - 0 ID=cds-MHV1764339.1;Parent=gene-AC3ASX_01285;Dbxref=NCBI_GP:MHV1764339.1;Name=MHV1764339.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.7;locus_tag=AC3ASX_01285;product=LysR substrate-binding domain-containing protein;protein_id=MHV1764339.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 220990 222040 . + . ID=gene-AC3ASX_01290;Name=AC3ASX_01290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01290;pseudo=true JBYLIA010000001.1 Protein Homology CDS 220990 222040 . + 0 ID=cds-AC3ASX_01290;Parent=gene-AC3ASX_01290;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549374.1;locus_tag=AC3ASX_01290;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 222242 222388 . + . ID=gene-AC3ASX_01295;Name=AC3ASX_01295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01295 JBYLIA010000001.1 GeneMarkS-2+ CDS 222242 222388 . + 0 ID=cds-MHV1764340.1;Parent=gene-AC3ASX_01295;Dbxref=NCBI_GP:MHV1764340.1;Name=MHV1764340.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_01295;product=hypothetical protein;protein_id=MHV1764340.1;transl_table=11 JBYLIA010000001.1 Genbank gene 222573 222737 . - . ID=gene-AC3ASX_01300;Name=AC3ASX_01300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01300 JBYLIA010000001.1 Protein Homology CDS 222573 222737 . - 0 ID=cds-MHV1764341.1;Parent=gene-AC3ASX_01300;Dbxref=NCBI_GP:MHV1764341.1;Name=MHV1764341.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012350.7;locus_tag=AC3ASX_01300;product=P-type ATPase actuator domain-containing protein;protein_id=MHV1764341.1;transl_table=11 JBYLIA010000001.1 Genbank gene 223256 223441 . - . ID=gene-AC3ASX_01305;Name=AC3ASX_01305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01305 JBYLIA010000001.1 GeneMarkS-2+ CDS 223256 223441 . - 0 ID=cds-MHV1764342.1;Parent=gene-AC3ASX_01305;Dbxref=NCBI_GP:MHV1764342.1;Name=MHV1764342.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_01305;product=hypothetical protein;protein_id=MHV1764342.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 223438 223750 . - . ID=gene-AC3ASX_01310;Name=AC3ASX_01310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01310;pseudo=true JBYLIA010000001.1 Protein Homology CDS 223438 223750 . - 0 ID=cds-AC3ASX_01310;Parent=gene-AC3ASX_01310;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038427.1;locus_tag=AC3ASX_01310;product=winged helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 223878 224521 . + . ID=gene-AC3ASX_01315;Name=AC3ASX_01315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01315;pseudo=true JBYLIA010000001.1 Protein Homology CDS 223878 224521 . + 0 ID=cds-AC3ASX_01315;Parent=gene-AC3ASX_01315;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014571.1;locus_tag=AC3ASX_01315;product=C39 family peptidase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 225647 225943 . - . ID=gene-AC3ASX_01320;Name=AC3ASX_01320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01320 JBYLIA010000001.1 GeneMarkS-2+ CDS 225647 225943 . - 0 ID=cds-MHV1764343.1;Parent=gene-AC3ASX_01320;Dbxref=NCBI_GP:MHV1764343.1;Name=MHV1764343.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_01320;product=hypothetical protein;protein_id=MHV1764343.1;transl_table=11 JBYLIA010000001.1 Genbank gene 225991 226146 . - . ID=gene-AC3ASX_01325;Name=AC3ASX_01325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01325 JBYLIA010000001.1 GeneMarkS-2+ CDS 225991 226146 . - 0 ID=cds-MHV1764344.1;Parent=gene-AC3ASX_01325;Dbxref=NCBI_GP:MHV1764344.1;Name=MHV1764344.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_01325;product=hypothetical protein;protein_id=MHV1764344.1;transl_table=11 JBYLIA010000001.1 Genbank gene 226177 226638 . - . ID=gene-AC3ASX_01330;Name=AC3ASX_01330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01330 JBYLIA010000001.1 GeneMarkS-2+ CDS 226177 226638 . - 0 ID=cds-MHV1764345.1;Parent=gene-AC3ASX_01330;Dbxref=NCBI_GP:MHV1764345.1;Name=MHV1764345.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_01330;product=hypothetical protein;protein_id=MHV1764345.1;transl_table=11 JBYLIA010000001.1 Genbank gene 227656 228654 . + . ID=gene-AC3ASX_01335;Name=AC3ASX_01335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01335 JBYLIA010000001.1 Protein Homology CDS 227656 228654 . + 0 ID=cds-MHV1764346.1;Parent=gene-AC3ASX_01335;Dbxref=NCBI_GP:MHV1764346.1;Name=MHV1764346.1;Ontology_term=GO:0046167,GO:0047952,GO:0051287,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA,NAD binding|0051287||IEA;go_process=glycerol-3-phosphate biosynthetic process|0046167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012279929.1;locus_tag=AC3ASX_01335;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=MHV1764346.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 228663 229192 . - . ID=gene-AC3ASX_01340;Name=AC3ASX_01340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01340;pseudo=true JBYLIA010000001.1 Protein Homology CDS 228663 229192 . - 0 ID=cds-AC3ASX_01340;Parent=gene-AC3ASX_01340;Note=frameshifted;Ontology_term=GO:0009403,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=toxin biosynthetic process|0009403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020854.1;locus_tag=AC3ASX_01340;product=CvpA family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 229197 230564 . - . ID=gene-AC3ASX_01345;Name=radA;gbkey=Gene;gene=radA;gene_biotype=pseudogene;locus_tag=AC3ASX_01345;pseudo=true JBYLIA010000001.1 Protein Homology CDS 229197 230564 . - 0 ID=cds-AC3ASX_01345;Parent=gene-AC3ASX_01345;Note=frameshifted%3B internal stop;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549376.1;locus_tag=AC3ASX_01345;product=DNA repair protein RadA;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 230587 231312 . - . ID=gene-AC3ASX_01350;Name=AC3ASX_01350;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01350;pseudo=true JBYLIA010000001.1 Protein Homology CDS 230587 231312 . - 0 ID=cds-AC3ASX_01350;Parent=gene-AC3ASX_01350;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003041654.1;locus_tag=AC3ASX_01350;product=PilZ domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 231309 231908 . - . ID=gene-AC3ASX_01355;Name=AC3ASX_01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01355 JBYLIA010000001.1 Protein Homology CDS 231309 231908 . - 0 ID=cds-MHV1764347.1;Parent=gene-AC3ASX_01355;Dbxref=NCBI_GP:MHV1764347.1;Name=MHV1764347.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549378.1;locus_tag=AC3ASX_01355;product=DedA family protein;protein_id=MHV1764347.1;transl_table=11 JBYLIA010000001.1 Genbank gene 231911 232969 . - . ID=gene-AC3ASX_01360;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=AC3ASX_01360 JBYLIA010000001.1 Protein Homology CDS 231911 232969 . - 0 ID=cds-MHV1764348.1;Parent=gene-AC3ASX_01360;Dbxref=NCBI_GP:MHV1764348.1;Name=MHV1764348.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549379.1;locus_tag=AC3ASX_01360;product=chorismate synthase;protein_id=MHV1764348.1;transl_table=11 JBYLIA010000001.1 Genbank gene 233129 233731 . - . ID=gene-AC3ASX_01365;Name=AC3ASX_01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01365 JBYLIA010000001.1 Protein Homology CDS 233129 233731 . - 0 ID=cds-MHV1764349.1;Parent=gene-AC3ASX_01365;Dbxref=NCBI_GP:MHV1764349.1;Name=MHV1764349.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922195.1;locus_tag=AC3ASX_01365;product=PQ-loop repeat-containing protein;protein_id=MHV1764349.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 233797 234315 . - . ID=gene-AC3ASX_01370;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=pseudogene;locus_tag=AC3ASX_01370;pseudo=true JBYLIA010000001.1 Protein Homology CDS 233797 234315 . - 0 ID=cds-AC3ASX_01370;Parent=gene-AC3ASX_01370;Note=internal stop;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547687.1;locus_tag=AC3ASX_01370;product=peptide-methionine (R)-S-oxide reductase MsrB;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 234473 235024 . + . ID=gene-AC3ASX_01375;Name=AC3ASX_01375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01375;pseudo=true JBYLIA010000001.1 Protein Homology CDS 234473 235024 . + 0 ID=cds-AC3ASX_01375;Parent=gene-AC3ASX_01375;Note=frameshifted;Ontology_term=GO:0006801,GO:0005507,GO:0046872;gbkey=CDS;go_function=copper ion binding|0005507||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018407.1;locus_tag=AC3ASX_01375;product=superoxide dismutase family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 235003 235814 . + . ID=gene-AC3ASX_01380;Name=AC3ASX_01380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01380;pseudo=true JBYLIA010000001.1 Protein Homology CDS 235003 235814 . + 0 ID=cds-AC3ASX_01380;Parent=gene-AC3ASX_01380;Note=frameshifted%3B internal stop;Ontology_term=GO:0006629,GO:0008610,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=lipid metabolic process|0006629||IEA,lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011457367.1;locus_tag=AC3ASX_01380;product=sterol desaturase family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 235960 237219 . - . ID=gene-AC3ASX_01385;Name=AC3ASX_01385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01385;pseudo=true JBYLIA010000001.1 Protein Homology CDS 235960 237219 . - 0 ID=cds-AC3ASX_01385;Parent=gene-AC3ASX_01385;Note=internal stop;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012544.7;locus_tag=AC3ASX_01385;product=amino acid permease;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 237375 237737 . + . ID=gene-AC3ASX_01390;Name=AC3ASX_01390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01390 JBYLIA010000001.1 Protein Homology CDS 237375 237737 . + 0 ID=cds-MHV1764350.1;Parent=gene-AC3ASX_01390;Dbxref=NCBI_GP:MHV1764350.1;Name=MHV1764350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011648585.1;locus_tag=AC3ASX_01390;product=phosphomannose isomerase type II C-terminal cupin domain;protein_id=MHV1764350.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 237832 238946 . + . ID=gene-AC3ASX_01395;Name=AC3ASX_01395;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01395;pseudo=true JBYLIA010000001.1 Protein Homology CDS 237832 238946 . + 0 ID=cds-AC3ASX_01395;Parent=gene-AC3ASX_01395;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549384.1;locus_tag=AC3ASX_01395;product=zinc-binding dehydrogenase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 239002 240192 . - . ID=gene-AC3ASX_01400;Name=AC3ASX_01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01400 JBYLIA010000001.1 Protein Homology CDS 239002 240192 . - 0 ID=cds-MHV1764351.1;Parent=gene-AC3ASX_01400;Dbxref=NCBI_GP:MHV1764351.1;Name=MHV1764351.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014600.1;locus_tag=AC3ASX_01400;product=pyridoxal phosphate-dependent aminotransferase;protein_id=MHV1764351.1;transl_table=11 JBYLIA010000001.1 Genbank gene 240392 241279 . + . ID=gene-AC3ASX_01405;Name=AC3ASX_01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01405 JBYLIA010000001.1 Protein Homology CDS 240392 241279 . + 0 ID=cds-MHV1764352.1;Parent=gene-AC3ASX_01405;Dbxref=NCBI_GP:MHV1764352.1;Name=MHV1764352.1;Ontology_term=GO:0006812,GO:0008324,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,efflux transmembrane transporter activity|0015562||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033080.1;locus_tag=AC3ASX_01405;product=cation diffusion facilitator family transporter;protein_id=MHV1764352.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 241365 243013 . + . ID=gene-AC3ASX_01410;Name=recN;gbkey=Gene;gene=recN;gene_biotype=pseudogene;locus_tag=AC3ASX_01410;pseudo=true JBYLIA010000001.1 Protein Homology CDS 241365 243013 . + 0 ID=cds-AC3ASX_01410;Parent=gene-AC3ASX_01410;Note=frameshifted;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014601.1;locus_tag=AC3ASX_01410;product=DNA repair protein RecN;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 243989 245122 . - . ID=gene-AC3ASX_01415;Name=AC3ASX_01415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01415;pseudo=true JBYLIA010000001.1 Protein Homology CDS 243989 245122 . - 0 ID=cds-AC3ASX_01415;Parent=gene-AC3ASX_01415;Note=frameshifted%3B internal stop;Ontology_term=GO:0007155,GO:0015628,GO:0009289,GO:0015627;gbkey=CDS;go_component=pilus|0009289||IEA,type II protein secretion system complex|0015627||IEA;go_process=cell adhesion|0007155||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035594.1;locus_tag=AC3ASX_01415;product=pilin;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 245602 245862 . - . ID=gene-AC3ASX_01420;Name=AC3ASX_01420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01420;pseudo=true JBYLIA010000001.1 Protein Homology CDS 245602 245862 . - 0 ID=cds-AC3ASX_01420;Parent=gene-AC3ASX_01420;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046276.3;locus_tag=AC3ASX_01420;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 245819 245989 . - . ID=gene-AC3ASX_01425;Name=AC3ASX_01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01425 JBYLIA010000001.1 Protein Homology CDS 245819 245989 . - 0 ID=cds-MHV1764353.1;Parent=gene-AC3ASX_01425;Dbxref=NCBI_GP:MHV1764353.1;Name=MHV1764353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020882.1;locus_tag=AC3ASX_01425;product=hypothetical protein;protein_id=MHV1764353.1;transl_table=11 JBYLIA010000001.1 Genbank gene 246162 246554 . - . ID=gene-AC3ASX_01430;Name=AC3ASX_01430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01430 JBYLIA010000001.1 Protein Homology CDS 246162 246554 . - 0 ID=cds-MHV1764354.1;Parent=gene-AC3ASX_01430;Dbxref=NCBI_GP:MHV1764354.1;Name=MHV1764354.1;Ontology_term=GO:0007155,GO:0015628,GO:0009289,GO:0015627;gbkey=CDS;go_component=pilus|0009289||IEA,type II protein secretion system complex|0015627||IEA;go_process=cell adhesion|0007155||IEA,protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035596.1;locus_tag=AC3ASX_01430;product=pilin;protein_id=MHV1764354.1;transl_table=11 JBYLIA010000001.1 Genbank gene 247273 247992 . + . ID=gene-AC3ASX_01435;Name=lpxE;gbkey=Gene;gene=lpxE;gene_biotype=protein_coding;locus_tag=AC3ASX_01435 JBYLIA010000001.1 Protein Homology CDS 247273 247992 . + 0 ID=cds-MHV1764355.1;Parent=gene-AC3ASX_01435;Dbxref=NCBI_GP:MHV1764355.1;Name=MHV1764355.1;gbkey=CDS;gene=lpxE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038444.1;locus_tag=AC3ASX_01435;product=lipid A 1-phosphatase LpxE;protein_id=MHV1764355.1;transl_table=11 JBYLIA010000001.1 Genbank gene 248140 248997 . + . ID=gene-AC3ASX_01440;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=AC3ASX_01440 JBYLIA010000001.1 Protein Homology CDS 248140 248997 . + 0 ID=cds-MHV1764356.1;Parent=gene-AC3ASX_01440;Dbxref=NCBI_GP:MHV1764356.1;Name=MHV1764356.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547700.1;locus_tag=AC3ASX_01440;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=MHV1764356.1;transl_table=11 JBYLIA010000001.1 Genbank gene 248997 250040 . + . ID=gene-AC3ASX_01445;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=AC3ASX_01445 JBYLIA010000001.1 Protein Homology CDS 248997 250040 . + 0 ID=cds-MHV1764357.1;Parent=gene-AC3ASX_01445;Dbxref=NCBI_GP:MHV1764357.1;Name=MHV1764357.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922209.1;locus_tag=AC3ASX_01445;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=MHV1764357.1;transl_table=11 JBYLIA010000001.1 Genbank gene 250040 252349 . + . ID=gene-AC3ASX_01450;Name=AC3ASX_01450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01450 JBYLIA010000001.1 Protein Homology CDS 250040 252349 . + 0 ID=cds-MHV1764358.1;Parent=gene-AC3ASX_01450;Dbxref=NCBI_GP:MHV1764358.1;Name=MHV1764358.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017842.1;locus_tag=AC3ASX_01450;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=MHV1764358.1;transl_table=11 JBYLIA010000001.1 Genbank gene 252353 252934 . + . ID=gene-AC3ASX_01455;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=AC3ASX_01455 JBYLIA010000001.1 Protein Homology CDS 252353 252934 . + 0 ID=cds-MHV1764359.1;Parent=gene-AC3ASX_01455;Dbxref=NCBI_GP:MHV1764359.1;Name=MHV1764359.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429266.1;locus_tag=AC3ASX_01455;product=phosphoribosylglycinamide formyltransferase;protein_id=MHV1764359.1;transl_table=11 JBYLIA010000001.1 Genbank gene 253196 253690 . + . ID=gene-AC3ASX_01460;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=AC3ASX_01460 JBYLIA010000001.1 Protein Homology CDS 253196 253690 . + 0 ID=cds-MHV1764360.1;Parent=gene-AC3ASX_01460;Dbxref=NCBI_GP:MHV1764360.1;Name=MHV1764360.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003041702.1;locus_tag=AC3ASX_01460;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=MHV1764360.1;transl_table=11 JBYLIA010000001.1 Genbank gene 253690 254787 . + . ID=gene-AC3ASX_01465;Name=AC3ASX_01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01465 JBYLIA010000001.1 Protein Homology CDS 253690 254787 . + 0 ID=cds-MHV1764361.1;Parent=gene-AC3ASX_01465;Dbxref=NCBI_GP:MHV1764361.1;Name=MHV1764361.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038450.1;locus_tag=AC3ASX_01465;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=MHV1764361.1;transl_table=11 JBYLIA010000001.1 Genbank gene 254803 255087 . + . ID=gene-AC3ASX_01470;Name=AC3ASX_01470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01470 JBYLIA010000001.1 Protein Homology CDS 254803 255087 . + 0 ID=cds-MHV1764362.1;Parent=gene-AC3ASX_01470;Dbxref=NCBI_GP:MHV1764362.1;Name=MHV1764362.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014707.7;locus_tag=AC3ASX_01470;product=epoxyqueuosine reductase QueH;protein_id=MHV1764362.1;transl_table=11 JBYLIA010000001.1 Genbank gene 255096 255263 . + . ID=gene-AC3ASX_01475;Name=AC3ASX_01475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01475 JBYLIA010000001.1 Protein Homology CDS 255096 255263 . + 0 ID=cds-MHV1764363.1;Parent=gene-AC3ASX_01475;Dbxref=NCBI_GP:MHV1764363.1;Name=MHV1764363.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014707.7;locus_tag=AC3ASX_01475;product=epoxyqueuosine reductase QueH;protein_id=MHV1764363.1;transl_table=11 JBYLIA010000001.1 Genbank gene 255329 255469 . + . ID=gene-AC3ASX_01480;Name=AC3ASX_01480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01480 JBYLIA010000001.1 Protein Homology CDS 255329 255469 . + 0 ID=cds-MHV1764364.1;Parent=gene-AC3ASX_01480;Dbxref=NCBI_GP:MHV1764364.1;Name=MHV1764364.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014707.7;locus_tag=AC3ASX_01480;product=epoxyqueuosine reductase QueH;protein_id=MHV1764364.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 255596 255932 . - . ID=gene-AC3ASX_01485;Name=AC3ASX_01485;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01485;pseudo=true JBYLIA010000001.1 Protein Homology CDS 255596 255932 . - 0 ID=cds-AC3ASX_01485;Parent=gene-AC3ASX_01485;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547706.1;locus_tag=AC3ASX_01485;product=YraN family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 256046 258052 . - . ID=gene-AC3ASX_01490;Name=AC3ASX_01490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01490 JBYLIA010000001.1 Protein Homology CDS 256046 258052 . - 0 ID=cds-MHV1764365.1;Parent=gene-AC3ASX_01490;Dbxref=NCBI_GP:MHV1764365.1;Name=MHV1764365.1;Ontology_term=GO:0006508,GO:0004222,GO:0008270;gbkey=CDS;go_function=metalloendopeptidase activity|0004222||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286422.1;locus_tag=AC3ASX_01490;product=M3 family metallopeptidase;protein_id=MHV1764365.1;transl_table=11 JBYLIA010000001.1 Genbank gene 258144 258515 . + . ID=gene-AC3ASX_01495;Name=AC3ASX_01495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01495 JBYLIA010000001.1 Protein Homology CDS 258144 258515 . + 0 ID=cds-MHV1764366.1;Parent=gene-AC3ASX_01495;Dbxref=NCBI_GP:MHV1764366.1;Name=MHV1764366.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547708.1;locus_tag=AC3ASX_01495;product=Mth938-like domain-containing protein;protein_id=MHV1764366.1;transl_table=11 JBYLIA010000001.1 Genbank gene 258598 259035 . + . ID=gene-AC3ASX_01500;Name=lpnA;gbkey=Gene;gene=lpnA;gene_biotype=protein_coding;locus_tag=AC3ASX_01500 JBYLIA010000001.1 Protein Homology CDS 258598 259035 . + 0 ID=cds-MHV1764367.1;Parent=gene-AC3ASX_01500;Dbxref=NCBI_GP:MHV1764367.1;Name=MHV1764367.1;gbkey=CDS;gene=lpnA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549396.1;locus_tag=AC3ASX_01500;product=outer member lipoprotein TUL4/LpnA;protein_id=MHV1764367.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 259653 260096 . + . ID=gene-AC3ASX_01505;Name=AC3ASX_01505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01505;pseudo=true JBYLIA010000001.1 Protein Homology CDS 259653 260096 . + 0 ID=cds-AC3ASX_01505;Parent=gene-AC3ASX_01505;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549397.1;locus_tag=AC3ASX_01505;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 260190 260653 . + . ID=gene-AC3ASX_01510;Name=AC3ASX_01510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01510;pseudo=true JBYLIA010000001.1 Protein Homology CDS 260190 260653 . + 0 ID=cds-AC3ASX_01510;Parent=gene-AC3ASX_01510;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020913.1;locus_tag=AC3ASX_01510;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 260729 261196 . + . ID=gene-AC3ASX_01515;Name=lpnB;gbkey=Gene;gene=lpnB;gene_biotype=protein_coding;locus_tag=AC3ASX_01515 JBYLIA010000001.1 Protein Homology CDS 260729 261196 . + 0 ID=cds-MHV1764368.1;Parent=gene-AC3ASX_01515;Dbxref=NCBI_GP:MHV1764368.1;Name=MHV1764368.1;gbkey=CDS;gene=lpnB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014689.1;locus_tag=AC3ASX_01515;product=TUL4 family outer member lipoprotein LpnB;protein_id=MHV1764368.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 261258 262700 . + . ID=gene-AC3ASX_01520;Name=AC3ASX_01520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01520;pseudo=true JBYLIA010000001.1 Protein Homology CDS 261258 262700 . + 0 ID=cds-AC3ASX_01520;Parent=gene-AC3ASX_01520;Note=frameshifted%3B internal stop;Ontology_term=GO:0009103,GO:0008754,GO:0008755,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=O-antigen ligase activity|0008754||IEA,O antigen polymerase activity|0008755||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020917.1;locus_tag=AC3ASX_01520;product=O-antigen ligase family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 262757 265054 . - . ID=gene-AC3ASX_01525;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=AC3ASX_01525 JBYLIA010000001.1 Protein Homology CDS 262757 265054 . - 0 ID=cds-MHV1764369.1;Parent=gene-AC3ASX_01525;Dbxref=NCBI_GP:MHV1764369.1;Name=MHV1764369.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033127.1;locus_tag=AC3ASX_01525;product=type I DNA topoisomerase;protein_id=MHV1764369.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 265252 265890 . + . ID=gene-AC3ASX_01530;Name=AC3ASX_01530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01530;pseudo=true JBYLIA010000001.1 Protein Homology CDS 265252 265890 . + 0 ID=cds-AC3ASX_01530;Parent=gene-AC3ASX_01530;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017865.1;locus_tag=AC3ASX_01530;product=ParA family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 265883 266804 . + . ID=gene-AC3ASX_01535;Name=AC3ASX_01535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01535;pseudo=true JBYLIA010000001.1 Protein Homology CDS 265883 266804 . + 0 ID=cds-AC3ASX_01535;Parent=gene-AC3ASX_01535;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026509.1;locus_tag=AC3ASX_01535;product=ParB/RepB/Spo0J family partition protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 266820 267515 . + . ID=gene-AC3ASX_01540;Name=AC3ASX_01540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01540;pseudo=true JBYLIA010000001.1 Protein Homology CDS 266820 267515 . + 0 ID=cds-AC3ASX_01540;Parent=gene-AC3ASX_01540;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286412.1;locus_tag=AC3ASX_01540;product=glutamine amidotransferase-related protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 267530 268411 . + . ID=gene-AC3ASX_01545;Name=AC3ASX_01545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01545 JBYLIA010000001.1 Protein Homology CDS 267530 268411 . + 0 ID=cds-MHV1764370.1;Parent=gene-AC3ASX_01545;Dbxref=NCBI_GP:MHV1764370.1;Name=MHV1764370.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011648588.1;locus_tag=AC3ASX_01545;product=SGNH/GDSL hydrolase family protein;protein_id=MHV1764370.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 268408 269001 . + . ID=gene-AC3ASX_01550;Name=AC3ASX_01550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01550;pseudo=true JBYLIA010000001.1 Protein Homology CDS 268408 269001 . + 0 ID=cds-AC3ASX_01550;Parent=gene-AC3ASX_01550;Note=frameshifted%3B internal stop;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003041717.1;locus_tag=AC3ASX_01550;product=HD domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 269060 269680 . - . ID=gene-AC3ASX_01555;Name=AC3ASX_01555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01555 JBYLIA010000001.1 Protein Homology CDS 269060 269680 . - 0 ID=cds-MHV1764371.1;Parent=gene-AC3ASX_01555;Dbxref=NCBI_GP:MHV1764371.1;Name=MHV1764371.1;Ontology_term=GO:0001510,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014551196.1;locus_tag=AC3ASX_01555;product=RlmE family RNA methyltransferase;protein_id=MHV1764371.1;transl_table=11 JBYLIA010000001.1 Genbank gene 269837 270304 . + . ID=gene-AC3ASX_01560;Name=AC3ASX_01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01560 JBYLIA010000001.1 Protein Homology CDS 269837 270304 . + 0 ID=cds-MHV1764372.1;Parent=gene-AC3ASX_01560;Dbxref=NCBI_GP:MHV1764372.1;Name=MHV1764372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429276.1;locus_tag=AC3ASX_01560;product=hypothetical protein;protein_id=MHV1764372.1;transl_table=11 JBYLIA010000001.1 Genbank gene 270299 270784 . - . ID=gene-AC3ASX_01565;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=AC3ASX_01565 JBYLIA010000001.1 Protein Homology CDS 270299 270784 . - 0 ID=cds-MHV1764373.1;Parent=gene-AC3ASX_01565;Dbxref=NCBI_GP:MHV1764373.1;Name=MHV1764373.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033138.1;locus_tag=AC3ASX_01565;product=signal peptidase II;protein_id=MHV1764373.1;transl_table=11 JBYLIA010000001.1 Genbank gene 270771 273578 . - . ID=gene-AC3ASX_01570;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=AC3ASX_01570 JBYLIA010000001.1 Protein Homology CDS 270771 273578 . - 0 ID=cds-MHV1764374.1;Parent=gene-AC3ASX_01570;Dbxref=NCBI_GP:MHV1764374.1;Name=MHV1764374.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033139.1;locus_tag=AC3ASX_01570;product=isoleucine--tRNA ligase;protein_id=MHV1764374.1;transl_table=11 JBYLIA010000001.1 Genbank gene 273679 274599 . - . ID=gene-AC3ASX_01575;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=AC3ASX_01575 JBYLIA010000001.1 Protein Homology CDS 273679 274599 . - 0 ID=cds-MHV1764375.1;Parent=gene-AC3ASX_01575;Dbxref=NCBI_GP:MHV1764375.1;Name=MHV1764375.1;Ontology_term=GO:0009231,GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549405.1;locus_tag=AC3ASX_01575;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=MHV1764375.1;transl_table=11 JBYLIA010000001.1 Genbank gene 274753 276567 . + . ID=gene-AC3ASX_01580;Name=AC3ASX_01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01580 JBYLIA010000001.1 Protein Homology CDS 274753 276567 . + 0 ID=cds-MHV1764376.1;Parent=gene-AC3ASX_01580;Dbxref=NCBI_GP:MHV1764376.1;Name=MHV1764376.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020936.1;locus_tag=AC3ASX_01580;product=NAD-dependent malic enzyme;protein_id=MHV1764376.1;transl_table=11 JBYLIA010000001.1 Genbank gene 276736 278409 . + . ID=gene-AC3ASX_01585;Name=AC3ASX_01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01585 JBYLIA010000001.1 Protein Homology CDS 276736 278409 . + 0 ID=cds-MHV1764377.1;Parent=gene-AC3ASX_01585;Dbxref=NCBI_GP:MHV1764377.1;Name=MHV1764377.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020942.1;locus_tag=AC3ASX_01585;product=DUF3573 domain-containing protein;protein_id=MHV1764377.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 278426 279856 . + . ID=gene-AC3ASX_01590;Name=AC3ASX_01590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01590;pseudo=true JBYLIA010000001.1 Protein Homology CDS 278426 279856 . + 0 ID=cds-AC3ASX_01590;Parent=gene-AC3ASX_01590;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014714.1;locus_tag=AC3ASX_01590;product=DUF3573 domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 280846 281357 . + . ID=gene-AC3ASX_01595;Name=AC3ASX_01595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01595;pseudo=true JBYLIA010000001.1 Protein Homology CDS 280846 281357 . + 0 ID=cds-AC3ASX_01595;Parent=gene-AC3ASX_01595;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022028.1;locus_tag=AC3ASX_01595;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 281592 282989 . + . ID=gene-AC3ASX_01600;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=AC3ASX_01600 JBYLIA010000001.1 Protein Homology CDS 281592 282989 . + 0 ID=cds-MHV1764378.1;Parent=gene-AC3ASX_01600;Dbxref=NCBI_GP:MHV1764378.1;Name=MHV1764378.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549408.1;locus_tag=AC3ASX_01600;product=ribosome biogenesis GTPase Der;protein_id=MHV1764378.1;transl_table=11 JBYLIA010000001.1 Genbank gene 282958 284262 . + . ID=gene-AC3ASX_01605;Name=AC3ASX_01605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01605 JBYLIA010000001.1 Protein Homology CDS 282958 284262 . + 0 ID=cds-MHV1764379.1;Parent=gene-AC3ASX_01605;Dbxref=NCBI_GP:MHV1764379.1;Name=MHV1764379.1;Ontology_term=GO:0016765;gbkey=CDS;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549409.1;locus_tag=AC3ASX_01605;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=MHV1764379.1;transl_table=11 JBYLIA010000001.1 Genbank gene 284270 285118 . + . ID=gene-AC3ASX_01610;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=AC3ASX_01610 JBYLIA010000001.1 Protein Homology CDS 284270 285118 . + 0 ID=cds-MHV1764380.1;Parent=gene-AC3ASX_01610;Dbxref=NCBI_GP:MHV1764380.1;Name=MHV1764380.1;Ontology_term=GO:0009252,GO:0008762;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003041733.1;locus_tag=AC3ASX_01610;product=UDP-N-acetylmuramate dehydrogenase;protein_id=MHV1764380.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 285194 286066 . + . ID=gene-AC3ASX_01615;Name=AC3ASX_01615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01615;pseudo=true JBYLIA010000001.1 Protein Homology CDS 285194 286066 . + 0 ID=cds-AC3ASX_01615;Parent=gene-AC3ASX_01615;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014659.1;locus_tag=AC3ASX_01615;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 286053 286880 . - . ID=gene-AC3ASX_01620;Name=AC3ASX_01620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01620 JBYLIA010000001.1 Protein Homology CDS 286053 286880 . - 0 ID=cds-MHV1764381.1;Parent=gene-AC3ASX_01620;Dbxref=NCBI_GP:MHV1764381.1;Name=MHV1764381.1;Ontology_term=GO:0032259,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003041736.1;locus_tag=AC3ASX_01620;product=methyltransferase domain-containing protein;protein_id=MHV1764381.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 286858 287521 . + . ID=gene-AC3ASX_01625;Name=AC3ASX_01625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01625;pseudo=true JBYLIA010000001.1 Protein Homology CDS 286858 287521 . + 0 ID=cds-AC3ASX_01625;Parent=gene-AC3ASX_01625;Note=frameshifted%3B internal stop;Ontology_term=GO:0030420;gbkey=CDS;go_process=establishment of competence for transformation|0030420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014657.1;locus_tag=AC3ASX_01625;product=ComF family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 287797 288135 . - . ID=gene-AC3ASX_01630;Name=AC3ASX_01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01630 JBYLIA010000001.1 Protein Homology CDS 287797 288135 . - 0 ID=cds-MHV1764382.1;Parent=gene-AC3ASX_01630;Dbxref=NCBI_GP:MHV1764382.1;Name=MHV1764382.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286395.1;locus_tag=AC3ASX_01630;product=histidine triad nucleotide-binding protein;protein_id=MHV1764382.1;transl_table=11 JBYLIA010000001.1 Genbank gene 288136 289794 . - . ID=gene-AC3ASX_01635;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=AC3ASX_01635 JBYLIA010000001.1 Protein Homology CDS 288136 289794 . - 0 ID=cds-MHV1764383.1;Parent=gene-AC3ASX_01635;Dbxref=NCBI_GP:MHV1764383.1;Name=MHV1764383.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022007.1;locus_tag=AC3ASX_01635;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=MHV1764383.1;transl_table=11 JBYLIA010000001.1 Genbank gene 289787 290374 . - . ID=gene-AC3ASX_01640;Name=AC3ASX_01640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01640 JBYLIA010000001.1 Protein Homology CDS 289787 290374 . - 0 ID=cds-MHV1764384.1;Parent=gene-AC3ASX_01640;Dbxref=NCBI_GP:MHV1764384.1;Name=MHV1764384.1;Ontology_term=GO:0006744,GO:0008289,GO:0110142;gbkey=CDS;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_function=lipid binding|0008289||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003029569.1;locus_tag=AC3ASX_01640;product=ubiquinone biosynthesis accessory factor UbiJ;protein_id=MHV1764384.1;transl_table=11 JBYLIA010000001.1 Genbank gene 290376 291128 . - . ID=gene-AC3ASX_01645;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=AC3ASX_01645 JBYLIA010000001.1 Protein Homology CDS 290376 291128 . - 0 ID=cds-MHV1764385.1;Parent=gene-AC3ASX_01645;Dbxref=NCBI_GP:MHV1764385.1;Name=MHV1764385.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286392.1;locus_tag=AC3ASX_01645;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=MHV1764385.1;transl_table=11 JBYLIA010000001.1 Genbank gene 291222 292238 . + . ID=gene-AC3ASX_01650;Name=glk;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=AC3ASX_01650 JBYLIA010000001.1 Protein Homology CDS 291222 292238 . + 0 ID=cds-MHV1764386.1;Parent=gene-AC3ASX_01650;Dbxref=NCBI_GP:MHV1764386.1;Name=MHV1764386.1;Ontology_term=GO:0005975,GO:0004340;gbkey=CDS;gene=glk;go_function=glucokinase activity|0004340||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547739.1;locus_tag=AC3ASX_01650;product=glucokinase;protein_id=MHV1764386.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 292240 292507 . - . ID=gene-AC3ASX_01655;Name=AC3ASX_01655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01655;pseudo=true JBYLIA010000001.1 Protein Homology CDS 292240 292507 . - 0 ID=cds-AC3ASX_01655;Parent=gene-AC3ASX_01655;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021998.1;locus_tag=AC3ASX_01655;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 292580 293110 . - . ID=gene-AC3ASX_01660;Name=AC3ASX_01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01660 JBYLIA010000001.1 Protein Homology CDS 292580 293110 . - 0 ID=cds-MHV1764387.1;Parent=gene-AC3ASX_01660;Dbxref=NCBI_GP:MHV1764387.1;Name=MHV1764387.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922250.1;locus_tag=AC3ASX_01660;product=septation protein A;protein_id=MHV1764387.1;transl_table=11 JBYLIA010000001.1 Genbank gene 293171 293785 . + . ID=gene-AC3ASX_01665;Name=AC3ASX_01665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01665 JBYLIA010000001.1 Protein Homology CDS 293171 293785 . + 0 ID=cds-MHV1764388.1;Parent=gene-AC3ASX_01665;Dbxref=NCBI_GP:MHV1764388.1;Name=MHV1764388.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase activity|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547742.1;locus_tag=AC3ASX_01665;product=L-threonylcarbamoyladenylate synthase;protein_id=MHV1764388.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 293812 295020 . - . ID=gene-AC3ASX_01670;Name=AC3ASX_01670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01670;pseudo=true JBYLIA010000001.1 Protein Homology CDS 293812 295020 . - 0 ID=cds-AC3ASX_01670;Parent=gene-AC3ASX_01670;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012279871.1;locus_tag=AC3ASX_01670;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 295034 297055 . - . ID=gene-AC3ASX_01675;Name=metG;gbkey=Gene;gene=metG;gene_biotype=pseudogene;locus_tag=AC3ASX_01675;pseudo=true JBYLIA010000001.1 Protein Homology CDS 295034 297055 . - 0 ID=cds-AC3ASX_01675;Parent=gene-AC3ASX_01675;Note=internal stop;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021984.1;locus_tag=AC3ASX_01675;product=methionine--tRNA ligase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 297240 297331 . + . ID=gene-AC3ASX_01680;Name=AC3ASX_01680;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_01680 JBYLIA010000001.1 tRNAscan-SE tRNA 297240 297331 . + . ID=rna-AC3ASX_01680;Parent=gene-AC3ASX_01680;anticodon=(pos:297274..297276);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_01680;product=tRNA-Ser JBYLIA010000001.1 tRNAscan-SE exon 297240 297331 . + . ID=exon-AC3ASX_01680-1;Parent=rna-AC3ASX_01680;anticodon=(pos:297274..297276);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_01680;product=tRNA-Ser JBYLIA010000001.1 Genbank gene 297478 300366 . + . ID=gene-AC3ASX_01685;Name=AC3ASX_01685;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC3ASX_01685 JBYLIA010000001.1 cmsearch rRNA 297478 300366 . + . ID=rna-AC3ASX_01685;Parent=gene-AC3ASX_01685;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_01685;product=23S ribosomal RNA JBYLIA010000001.1 cmsearch exon 297478 300366 . + . ID=exon-AC3ASX_01685-1;Parent=rna-AC3ASX_01685;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_01685;product=23S ribosomal RNA JBYLIA010000001.1 Genbank gene 300414 300528 . + . ID=gene-AC3ASX_01690;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC3ASX_01690 JBYLIA010000001.1 cmsearch rRNA 300414 300528 . + . ID=rna-AC3ASX_01690;Parent=gene-AC3ASX_01690;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_01690;product=5S ribosomal RNA JBYLIA010000001.1 cmsearch exon 300414 300528 . + . ID=exon-AC3ASX_01690-1;Parent=rna-AC3ASX_01690;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_01690;product=5S ribosomal RNA JBYLIA010000001.1 Genbank gene 300855 301010 . - . ID=gene-AC3ASX_01695;Name=AC3ASX_01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01695 JBYLIA010000001.1 GeneMarkS-2+ CDS 300855 301010 . - 0 ID=cds-MHV1764389.1;Parent=gene-AC3ASX_01695;Dbxref=NCBI_GP:MHV1764389.1;Name=MHV1764389.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_01695;product=hypothetical protein;protein_id=MHV1764389.1;transl_table=11 JBYLIA010000001.1 Genbank gene 301137 302333 . + . ID=gene-AC3ASX_01700;Name=AC3ASX_01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01700 JBYLIA010000001.1 Protein Homology CDS 301137 302333 . + 0 ID=cds-MHV1764390.1;Parent=gene-AC3ASX_01700;Dbxref=NCBI_GP:MHV1764390.1;Name=MHV1764390.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017441.1;locus_tag=AC3ASX_01700;product=amino acid permease;protein_id=MHV1764390.1;transl_table=11 JBYLIA010000001.1 Genbank gene 302409 303413 . + . ID=gene-AC3ASX_01705;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=AC3ASX_01705 JBYLIA010000001.1 Protein Homology CDS 302409 303413 . + 0 ID=cds-MHV1764391.1;Parent=gene-AC3ASX_01705;Dbxref=NCBI_GP:MHV1764391.1;Name=MHV1764391.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003024472.1;locus_tag=AC3ASX_01705;product=Obg family GTPase CgtA;protein_id=MHV1764391.1;transl_table=11 JBYLIA010000001.1 Genbank gene 303420 305294 . + . ID=gene-AC3ASX_01710;Name=AC3ASX_01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01710 JBYLIA010000001.1 Protein Homology CDS 303420 305294 . + 0 ID=cds-MHV1764392.1;Parent=gene-AC3ASX_01710;Dbxref=NCBI_GP:MHV1764392.1;Name=MHV1764392.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022708.1;locus_tag=AC3ASX_01710;product=APC family permease;protein_id=MHV1764392.1;transl_table=11 JBYLIA010000001.1 Genbank gene 305295 305564 . + . ID=gene-AC3ASX_01715;Name=AC3ASX_01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01715 JBYLIA010000001.1 GeneMarkS-2+ CDS 305295 305564 . + 0 ID=cds-MHV1764393.1;Parent=gene-AC3ASX_01715;Dbxref=NCBI_GP:MHV1764393.1;Name=MHV1764393.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_01715;product=hypothetical protein;protein_id=MHV1764393.1;transl_table=11 JBYLIA010000001.1 Genbank gene 306129 306632 . + . ID=gene-AC3ASX_01720;Name=AC3ASX_01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01720 JBYLIA010000001.1 GeneMarkS-2+ CDS 306129 306632 . + 0 ID=cds-MHV1764394.1;Parent=gene-AC3ASX_01720;Dbxref=NCBI_GP:MHV1764394.1;Name=MHV1764394.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_01720;product=hypothetical protein;protein_id=MHV1764394.1;transl_table=11 JBYLIA010000001.1 Genbank gene 306636 306926 . + . ID=gene-AC3ASX_01725;Name=AC3ASX_01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01725 JBYLIA010000001.1 GeneMarkS-2+ CDS 306636 306926 . + 0 ID=cds-MHV1764395.1;Parent=gene-AC3ASX_01725;Dbxref=NCBI_GP:MHV1764395.1;Name=MHV1764395.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_01725;product=P-loop NTPase family protein;protein_id=MHV1764395.1;transl_table=11 JBYLIA010000001.1 Genbank gene 306916 308340 . - . ID=gene-AC3ASX_01730;Name=nhaD;gbkey=Gene;gene=nhaD;gene_biotype=protein_coding;locus_tag=AC3ASX_01730 JBYLIA010000001.1 Protein Homology CDS 306916 308340 . - 0 ID=cds-MHV1764396.1;Parent=gene-AC3ASX_01730;Dbxref=NCBI_GP:MHV1764396.1;Name=MHV1764396.1;Ontology_term=GO:0006814,GO:0015297;gbkey=CDS;gene=nhaD;go_function=antiporter activity|0015297||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429896.1;locus_tag=AC3ASX_01730;product=sodium:proton antiporter NhaD;protein_id=MHV1764396.1;transl_table=11 JBYLIA010000001.1 Genbank gene 308514 309701 . + . ID=gene-AC3ASX_01735;Name=AC3ASX_01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01735 JBYLIA010000001.1 Protein Homology CDS 308514 309701 . + 0 ID=cds-MHV1764397.1;Parent=gene-AC3ASX_01735;Dbxref=NCBI_GP:MHV1764397.1;Name=MHV1764397.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004340008.1;locus_tag=AC3ASX_01735;product=multidrug effflux MFS transporter;protein_id=MHV1764397.1;transl_table=11 JBYLIA010000001.1 Genbank gene 309756 310121 . - . ID=gene-AC3ASX_01740;Name=AC3ASX_01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01740 JBYLIA010000001.1 Protein Homology CDS 309756 310121 . - 0 ID=cds-MHV1764398.1;Parent=gene-AC3ASX_01740;Dbxref=NCBI_GP:MHV1764398.1;Name=MHV1764398.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012360.7;locus_tag=AC3ASX_01740;product=LbetaH domain-containing protein;protein_id=MHV1764398.1;transl_table=11 JBYLIA010000001.1 Genbank gene 310373 311725 . - . ID=gene-AC3ASX_01745;Name=trhP;gbkey=Gene;gene=trhP;gene_biotype=protein_coding;gene_synonym=yegQ;locus_tag=AC3ASX_01745 JBYLIA010000001.1 Protein Homology CDS 310373 311725 . - 0 ID=cds-MHV1764399.1;Parent=gene-AC3ASX_01745;Dbxref=NCBI_GP:MHV1764399.1;Name=MHV1764399.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhP;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714572.1;locus_tag=AC3ASX_01745;product=prephenate-dependent tRNA uridine(34) hydroxylase TrhP;protein_id=MHV1764399.1;transl_table=11 JBYLIA010000001.1 Genbank gene 312097 312717 . + . ID=gene-AC3ASX_01750;Name=AC3ASX_01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01750 JBYLIA010000001.1 Protein Homology CDS 312097 312717 . + 0 ID=cds-MHV1764400.1;Parent=gene-AC3ASX_01750;Dbxref=NCBI_GP:MHV1764400.1;Name=MHV1764400.1;Ontology_term=GO:0030091,GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein repair|0030091||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429894.1;locus_tag=AC3ASX_01750;product=protein-L-isoaspartate O-methyltransferase family protein;protein_id=MHV1764400.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 312726 314254 . + . ID=gene-AC3ASX_01755;Name=AC3ASX_01755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01755;pseudo=true JBYLIA010000001.1 Protein Homology CDS 312726 314254 . + 0 ID=cds-AC3ASX_01755;Parent=gene-AC3ASX_01755;Note=frameshifted;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022695.1;locus_tag=AC3ASX_01755;product=TolC family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 314263 314904 . + . ID=gene-AC3ASX_01760;Name=AC3ASX_01760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01760 JBYLIA010000001.1 Protein Homology CDS 314263 314904 . + 0 ID=cds-MHV1764401.1;Parent=gene-AC3ASX_01760;Dbxref=NCBI_GP:MHV1764401.1;Name=MHV1764401.1;Ontology_term=GO:0008897;gbkey=CDS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550301.1;locus_tag=AC3ASX_01760;product=4'-phosphopantetheinyl transferase family protein;protein_id=MHV1764401.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 314915 316264 . + . ID=gene-AC3ASX_01765;Name=gad;gbkey=Gene;gene=gad;gene_biotype=pseudogene;locus_tag=AC3ASX_01765;pseudo=true JBYLIA010000001.1 Protein Homology CDS 314915 316264 . + 0 ID=cds-AC3ASX_01765;Parent=gene-AC3ASX_01765;Note=frameshifted%3B internal stop;Ontology_term=GO:0006540,GO:0004351,GO:0030170;gbkey=CDS;gene=gad;go_function=glutamate decarboxylase activity|0004351||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=GABA shunt|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339999.1;locus_tag=AC3ASX_01765;product=glutamate decarboxylase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 316357 317853 . + . ID=gene-AC3ASX_01770;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=AC3ASX_01770 JBYLIA010000001.1 Protein Homology CDS 316357 317853 . + 0 ID=cds-MHV1764402.1;Parent=gene-AC3ASX_01770;Dbxref=NCBI_GP:MHV1764402.1;Name=MHV1764402.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004578527.1;locus_tag=AC3ASX_01770;product=amidophosphoribosyltransferase;protein_id=MHV1764402.1;transl_table=11 JBYLIA010000001.1 Genbank gene 317846 321715 . + . ID=gene-AC3ASX_01775;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=AC3ASX_01775 JBYLIA010000001.1 Protein Homology CDS 317846 321715 . + 0 ID=cds-MHV1764403.1;Parent=gene-AC3ASX_01775;Dbxref=NCBI_GP:MHV1764403.1;Name=MHV1764403.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022688.1;locus_tag=AC3ASX_01775;product=phosphoribosylformylglycinamidine synthase;protein_id=MHV1764403.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 323010 323851 . + . ID=gene-AC3ASX_01780;Name=AC3ASX_01780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01780;pseudo=true JBYLIA010000001.1 Protein Homology CDS 323010 323851 . + 0 ID=cds-AC3ASX_01780;Parent=gene-AC3ASX_01780;Note=frameshifted%3B internal stop;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339034.1;locus_tag=AC3ASX_01780;product=aldose epimerase family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 324453 324575 . - . ID=gene-AC3ASX_01785;Name=AC3ASX_01785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01785 JBYLIA010000001.1 GeneMarkS-2+ CDS 324453 324575 . - 0 ID=cds-MHV1764404.1;Parent=gene-AC3ASX_01785;Dbxref=NCBI_GP:MHV1764404.1;Name=MHV1764404.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_01785;product=hypothetical protein;protein_id=MHV1764404.1;transl_table=11 JBYLIA010000001.1 Genbank gene 324887 326188 . + . ID=gene-AC3ASX_01790;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=AC3ASX_01790 JBYLIA010000001.1 Protein Homology CDS 324887 326188 . + 0 ID=cds-MHV1764405.1;Parent=gene-AC3ASX_01790;Dbxref=NCBI_GP:MHV1764405.1;Name=MHV1764405.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022846.1;locus_tag=AC3ASX_01790;product=adenylosuccinate lyase;protein_id=MHV1764405.1;transl_table=11 JBYLIA010000001.1 Genbank gene 326582 326893 . + . ID=gene-AC3ASX_01795;Name=AC3ASX_01795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01795 JBYLIA010000001.1 GeneMarkS-2+ CDS 326582 326893 . + 0 ID=cds-MHV1764406.1;Parent=gene-AC3ASX_01795;Dbxref=NCBI_GP:MHV1764406.1;Name=MHV1764406.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_01795;product=hypothetical protein;protein_id=MHV1764406.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 326940 328420 . + . ID=gene-AC3ASX_01800;Name=AC3ASX_01800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01800;pseudo=true JBYLIA010000001.1 Protein Homology CDS 326940 328420 . + 0 ID=cds-AC3ASX_01800;Parent=gene-AC3ASX_01800;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524,GO:0016887,GO:0140657;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATP-dependent activity|0140657||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549035.1;locus_tag=AC3ASX_01800;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 328434 329503 . + . ID=gene-AC3ASX_01805;Name=AC3ASX_01805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01805;pseudo=true JBYLIA010000001.1 Protein Homology CDS 328434 329503 . + 0 ID=cds-AC3ASX_01805;Parent=gene-AC3ASX_01805;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003028585.1;locus_tag=AC3ASX_01805;product=HlyD family secretion protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 329587 329874 . + . ID=gene-AC3ASX_01810;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=AC3ASX_01810 JBYLIA010000001.1 Protein Homology CDS 329587 329874 . + 0 ID=cds-MHV1764407.1;Parent=gene-AC3ASX_01810;Dbxref=NCBI_GP:MHV1764407.1;Name=MHV1764407.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714582.1;locus_tag=AC3ASX_01810;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=MHV1764407.1;transl_table=11 JBYLIA010000001.1 Genbank gene 329887 331332 . + . ID=gene-AC3ASX_01815;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=AC3ASX_01815 JBYLIA010000001.1 Protein Homology CDS 329887 331332 . + 0 ID=cds-MHV1764408.1;Parent=gene-AC3ASX_01815;Dbxref=NCBI_GP:MHV1764408.1;Name=MHV1764408.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018275.1;locus_tag=AC3ASX_01815;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=MHV1764408.1;transl_table=11 JBYLIA010000001.1 Genbank gene 331335 332780 . + . ID=gene-AC3ASX_01820;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=AC3ASX_01820 JBYLIA010000001.1 Protein Homology CDS 331335 332780 . + 0 ID=cds-MHV1764409.1;Parent=gene-AC3ASX_01820;Dbxref=NCBI_GP:MHV1764409.1;Name=MHV1764409.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017411.1;locus_tag=AC3ASX_01820;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=MHV1764409.1;transl_table=11 JBYLIA010000001.1 Genbank gene 332767 333174 . + . ID=gene-AC3ASX_01825;Name=AC3ASX_01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01825 JBYLIA010000001.1 Protein Homology CDS 332767 333174 . + 0 ID=cds-MHV1764410.1;Parent=gene-AC3ASX_01825;Dbxref=NCBI_GP:MHV1764410.1;Name=MHV1764410.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017410.1;locus_tag=AC3ASX_01825;product=hypothetical protein;protein_id=MHV1764410.1;transl_table=11 JBYLIA010000001.1 Genbank gene 333194 333871 . - . ID=gene-AC3ASX_01830;Name=AC3ASX_01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01830 JBYLIA010000001.1 Protein Homology CDS 333194 333871 . - 0 ID=cds-MHV1764411.1;Parent=gene-AC3ASX_01830;Dbxref=NCBI_GP:MHV1764411.1;Name=MHV1764411.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022871.1;locus_tag=AC3ASX_01830;product=hypothetical protein;protein_id=MHV1764411.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 333949 335070 . - . ID=gene-AC3ASX_01835;Name=fslD;gbkey=Gene;gene=fslD;gene_biotype=pseudogene;locus_tag=AC3ASX_01835;pseudo=true JBYLIA010000001.1 Protein Homology CDS 333949 335070 . - 0 ID=cds-AC3ASX_01835;Parent=gene-AC3ASX_01835;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=fslD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339006.1;locus_tag=AC3ASX_01835;product=rhizoferrin import MFS transporter FslD;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 335085 336311 . - . ID=gene-AC3ASX_01840;Name=fslC;gbkey=Gene;gene=fslC;gene_biotype=pseudogene;locus_tag=AC3ASX_01840;pseudo=true JBYLIA010000001.1 Protein Homology CDS 335085 336311 . - 0 ID=cds-AC3ASX_01840;Parent=gene-AC3ASX_01840;Note=frameshifted%3B internal stop;Ontology_term=GO:0019290;gbkey=CDS;gene=fslC;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003024549.1;locus_tag=AC3ASX_01840;product=rhizoferrin biosystnesis N-citrylornithine decarboxylase FslC;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 336308 337541 . - . ID=gene-AC3ASX_01845;Name=fslB;gbkey=Gene;gene=fslB;gene_biotype=pseudogene;locus_tag=AC3ASX_01845;pseudo=true JBYLIA010000001.1 Protein Homology CDS 336308 337541 . - 0 ID=cds-AC3ASX_01845;Parent=gene-AC3ASX_01845;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=fslB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017400.1;locus_tag=AC3ASX_01845;product=rhizoferrin export MFS transporter FslB;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 337546 339255 . - . ID=gene-AC3ASX_01850;Name=AC3ASX_01850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01850;pseudo=true JBYLIA010000001.1 Protein Homology CDS 337546 339255 . - 0 ID=cds-AC3ASX_01850;Parent=gene-AC3ASX_01850;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031183.1;locus_tag=AC3ASX_01850;product=IucA/IucC family siderophore biosynthesis protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 339482 339923 . - . ID=gene-AC3ASX_01855;Name=AC3ASX_01855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01855;pseudo=true JBYLIA010000001.1 Protein Homology CDS 339482 339923 . - 0 ID=cds-AC3ASX_01855;Parent=gene-AC3ASX_01855;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017396.1;locus_tag=AC3ASX_01855;product=Fur family transcriptional regulator;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 340140 340538 . + . ID=gene-AC3ASX_01860;Name=ndhC;gbkey=Gene;gene=ndhC;gene_biotype=protein_coding;locus_tag=AC3ASX_01860 JBYLIA010000001.1 Protein Homology CDS 340140 340538 . + 0 ID=cds-MHV1764412.1;Parent=gene-AC3ASX_01860;Dbxref=NCBI_GP:MHV1764412.1;Name=MHV1764412.1;Ontology_term=GO:0008137;gbkey=CDS;gene=ndhC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022891.1;locus_tag=AC3ASX_01860;product=NADH-quinone oxidoreductase subunit A;protein_id=MHV1764412.1;transl_table=11 JBYLIA010000001.1 Genbank gene 340529 341005 . + . ID=gene-AC3ASX_01865;Name=AC3ASX_01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01865 JBYLIA010000001.1 Protein Homology CDS 340529 341005 . + 0 ID=cds-MHV1764413.1;Parent=gene-AC3ASX_01865;Dbxref=NCBI_GP:MHV1764413.1;Name=MHV1764413.1;Ontology_term=GO:0008137,GO:0016655,GO:0048038,GO:0051539,GO:0005886,GO:0045271;gbkey=CDS;go_component=plasma membrane|0005886||IEA,respiratory chain complex I|0045271||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017394.1;locus_tag=AC3ASX_01865;product=NuoB/complex I 20 kDa subunit family protein;protein_id=MHV1764413.1;transl_table=11 JBYLIA010000001.1 Genbank gene 341008 341652 . + . ID=gene-AC3ASX_01870;Name=AC3ASX_01870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01870 JBYLIA010000001.1 Protein Homology CDS 341008 341652 . + 0 ID=cds-MHV1764414.1;Parent=gene-AC3ASX_01870;Dbxref=NCBI_GP:MHV1764414.1;Name=MHV1764414.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003041313.1;locus_tag=AC3ASX_01870;product=NADH-quinone oxidoreductase subunit C;protein_id=MHV1764414.1;transl_table=11 JBYLIA010000001.1 Genbank gene 341677 342930 . + . ID=gene-AC3ASX_01875;Name=AC3ASX_01875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01875 JBYLIA010000001.1 Protein Homology CDS 341677 342930 . + 0 ID=cds-MHV1764415.1;Parent=gene-AC3ASX_01875;Dbxref=NCBI_GP:MHV1764415.1;Name=MHV1764415.1;Ontology_term=GO:0016651,GO:0048038,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,quinone binding|0048038||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549020.1;locus_tag=AC3ASX_01875;product=NADH-quinone oxidoreductase subunit D;protein_id=MHV1764415.1;transl_table=11 JBYLIA010000001.1 Genbank gene 342940 343428 . + . ID=gene-AC3ASX_01880;Name=AC3ASX_01880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01880 JBYLIA010000001.1 Protein Homology CDS 342940 343428 . + 0 ID=cds-MHV1764416.1;Parent=gene-AC3ASX_01880;Dbxref=NCBI_GP:MHV1764416.1;Name=MHV1764416.1;Ontology_term=GO:0016491,GO:0046872,GO:0051537;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549019.1;locus_tag=AC3ASX_01880;product=NADH-quinone oxidoreductase subunit NuoE family protein;protein_id=MHV1764416.1;transl_table=11 JBYLIA010000001.1 Genbank gene 343432 344706 . + . ID=gene-AC3ASX_01885;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=AC3ASX_01885 JBYLIA010000001.1 Protein Homology CDS 343432 344706 . + 0 ID=cds-MHV1764417.1;Parent=gene-AC3ASX_01885;Dbxref=NCBI_GP:MHV1764417.1;Name=MHV1764417.1;Ontology_term=GO:0010181,GO:0050136,GO:0051287,GO:0051539;gbkey=CDS;gene=nuoF;go_function=FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714596.1;locus_tag=AC3ASX_01885;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=MHV1764417.1;transl_table=11 JBYLIA010000001.1 Genbank gene 344724 347081 . + . ID=gene-AC3ASX_01890;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=AC3ASX_01890 JBYLIA010000001.1 Protein Homology CDS 344724 347081 . + 0 ID=cds-MHV1764418.1;Parent=gene-AC3ASX_01890;Dbxref=NCBI_GP:MHV1764418.1;Name=MHV1764418.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035184.1;locus_tag=AC3ASX_01890;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=MHV1764418.1;transl_table=11 JBYLIA010000001.1 Genbank gene 347097 348095 . + . ID=gene-AC3ASX_01895;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=AC3ASX_01895 JBYLIA010000001.1 Protein Homology CDS 347097 348095 . + 0 ID=cds-MHV1764419.1;Parent=gene-AC3ASX_01895;Dbxref=NCBI_GP:MHV1764419.1;Name=MHV1764419.1;Ontology_term=GO:0016020;gbkey=CDS;gene=nuoH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429074.1;locus_tag=AC3ASX_01895;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=MHV1764419.1;transl_table=11 JBYLIA010000001.1 Genbank gene 348121 348609 . + . ID=gene-AC3ASX_01900;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=AC3ASX_01900 JBYLIA010000001.1 Protein Homology CDS 348121 348609 . + 0 ID=cds-MHV1764420.1;Parent=gene-AC3ASX_01900;Dbxref=NCBI_GP:MHV1764420.1;Name=MHV1764420.1;Ontology_term=GO:0016651,GO:0051539;gbkey=CDS;gene=nuoI;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286959.1;locus_tag=AC3ASX_01900;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=MHV1764420.1;transl_table=11 JBYLIA010000001.1 Genbank gene 348614 349219 . + . ID=gene-AC3ASX_01905;Name=AC3ASX_01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01905 JBYLIA010000001.1 Protein Homology CDS 348614 349219 . + 0 ID=cds-MHV1764421.1;Parent=gene-AC3ASX_01905;Dbxref=NCBI_GP:MHV1764421.1;Name=MHV1764421.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035180.1;locus_tag=AC3ASX_01905;product=NADH-quinone oxidoreductase subunit J;protein_id=MHV1764421.1;transl_table=11 JBYLIA010000001.1 Genbank gene 349212 349529 . + . ID=gene-AC3ASX_01910;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=AC3ASX_01910 JBYLIA010000001.1 Protein Homology CDS 349212 349529 . + 0 ID=cds-MHV1764422.1;Parent=gene-AC3ASX_01910;Dbxref=NCBI_GP:MHV1764422.1;Name=MHV1764422.1;gbkey=CDS;gene=nuoK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714600.1;locus_tag=AC3ASX_01910;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=MHV1764422.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 349539 350810 . + . ID=gene-AC3ASX_01915;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=pseudogene;locus_tag=AC3ASX_01915;pseudo=true JBYLIA010000001.1 Protein Homology CDS 349539 350810 . + 0 ID=cds-AC3ASX_01915;Parent=gene-AC3ASX_01915;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429075.1;locus_tag=AC3ASX_01915;product=NADH-quinone oxidoreductase subunit L;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 350878 351854 . + . ID=gene-AC3ASX_01920;Name=AC3ASX_01920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01920;pseudo=true JBYLIA010000001.1 Protein Homology CDS 350878 351854 . + 0 ID=cds-AC3ASX_01920;Parent=gene-AC3ASX_01920;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003824,GO:0030976;gbkey=CDS;go_function=catalytic activity|0003824||IEA,thiamine pyrophosphate binding|0030976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429909.1;locus_tag=AC3ASX_01920;product=thiamine pyrophosphate-dependent enzyme;pseudo=true;transl_table=11 JBYLIA010000001.1 cmsearch riboswitch 352401 352548 . + . ID=id-JBYLIA010000001.1:352401..352548;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch JBYLIA010000001.1 Genbank gene 352668 353735 . + . ID=gene-AC3ASX_01925;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=AC3ASX_01925 JBYLIA010000001.1 Protein Homology CDS 352668 353735 . + 0 ID=cds-MHV1764423.1;Parent=gene-AC3ASX_01925;Dbxref=NCBI_GP:MHV1764423.1;Name=MHV1764423.1;Ontology_term=GO:0009231,GO:0008703,GO:0008835;gbkey=CDS;gene=ribD;go_function=5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549203.1;locus_tag=AC3ASX_01925;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=MHV1764423.1;transl_table=11 JBYLIA010000001.1 Genbank gene 353728 354333 . + . ID=gene-AC3ASX_01930;Name=AC3ASX_01930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01930 JBYLIA010000001.1 Protein Homology CDS 353728 354333 . + 0 ID=cds-MHV1764424.1;Parent=gene-AC3ASX_01930;Dbxref=NCBI_GP:MHV1764424.1;Name=MHV1764424.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547434.1;locus_tag=AC3ASX_01930;product=riboflavin synthase;protein_id=MHV1764424.1;transl_table=11 JBYLIA010000001.1 Genbank gene 354326 355537 . + . ID=gene-AC3ASX_01935;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=AC3ASX_01935 JBYLIA010000001.1 Protein Homology CDS 354326 355537 . + 0 ID=cds-MHV1764425.1;Parent=gene-AC3ASX_01935;Dbxref=NCBI_GP:MHV1764425.1;Name=MHV1764425.1;Ontology_term=GO:0009231,GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017616.1;locus_tag=AC3ASX_01935;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=MHV1764425.1;transl_table=11 JBYLIA010000001.1 Genbank gene 355547 355990 . + . ID=gene-AC3ASX_01940;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=AC3ASX_01940 JBYLIA010000001.1 Protein Homology CDS 355547 355990 . + 0 ID=cds-MHV1764426.1;Parent=gene-AC3ASX_01940;Dbxref=NCBI_GP:MHV1764426.1;Name=MHV1764426.1;Ontology_term=GO:0009231,GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;go_process=riboflavin biosynthetic process|0009231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286745.1;locus_tag=AC3ASX_01940;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=MHV1764426.1;transl_table=11 JBYLIA010000001.1 Genbank gene 355993 356517 . + . ID=gene-AC3ASX_01945;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=AC3ASX_01945 JBYLIA010000001.1 Protein Homology CDS 355993 356517 . + 0 ID=cds-MHV1764427.1;Parent=gene-AC3ASX_01945;Dbxref=NCBI_GP:MHV1764427.1;Name=MHV1764427.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714204.1;locus_tag=AC3ASX_01945;product=peptide deformylase;protein_id=MHV1764427.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 356593 357607 . + . ID=gene-AC3ASX_01950;Name=AC3ASX_01950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_01950;pseudo=true JBYLIA010000001.1 Protein Homology CDS 356593 357607 . + 0 ID=cds-AC3ASX_01950;Parent=gene-AC3ASX_01950;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003032766.1;locus_tag=AC3ASX_01950;product=FTN_0109 family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 357623 358702 . - . ID=gene-AC3ASX_01955;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=AC3ASX_01955 JBYLIA010000001.1 Protein Homology CDS 357623 358702 . - 0 ID=cds-MHV1764428.1;Parent=gene-AC3ASX_01955;Dbxref=NCBI_GP:MHV1764428.1;Name=MHV1764428.1;Ontology_term=GO:0008033,GO:0016740,GO:0016783;gbkey=CDS;gene=mnmA;go_function=transferase activity|0016740||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022640.1;locus_tag=AC3ASX_01955;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=MHV1764428.1;transl_table=11 JBYLIA010000001.1 Genbank gene 358719 360503 . - . ID=gene-AC3ASX_01960;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=AC3ASX_01960 JBYLIA010000001.1 Protein Homology CDS 358719 360503 . - 0 ID=cds-MHV1764429.1;Parent=gene-AC3ASX_01960;Dbxref=NCBI_GP:MHV1764429.1;Name=MHV1764429.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017609.1;locus_tag=AC3ASX_01960;product=translation elongation factor 4;protein_id=MHV1764429.1;transl_table=11 JBYLIA010000001.1 Genbank gene 360758 361030 . + . ID=gene-AC3ASX_01965;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=AC3ASX_01965 JBYLIA010000001.1 Protein Homology CDS 360758 361030 . + 0 ID=cds-MHV1764430.1;Parent=gene-AC3ASX_01965;Dbxref=NCBI_GP:MHV1764430.1;Name=MHV1764430.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286750.1;locus_tag=AC3ASX_01965;product=30S ribosomal protein S20;protein_id=MHV1764430.1;transl_table=11 JBYLIA010000001.1 Genbank gene 361101 361457 . - . ID=gene-AC3ASX_01970;Name=AC3ASX_01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01970 JBYLIA010000001.1 Protein Homology CDS 361101 361457 . - 0 ID=cds-MHV1764431.1;Parent=gene-AC3ASX_01970;Dbxref=NCBI_GP:MHV1764431.1;Name=MHV1764431.1;Ontology_term=GO:0051205,GO:0030674,GO:1990063;gbkey=CDS;go_component=Bam protein complex|1990063||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=protein insertion into membrane|0051205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549196.1;locus_tag=AC3ASX_01970;product=outer membrane protein assembly factor BamE;protein_id=MHV1764431.1;transl_table=11 JBYLIA010000001.1 Genbank gene 361465 362061 . - . ID=gene-AC3ASX_01975;Name=AC3ASX_01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01975 JBYLIA010000001.1 Protein Homology CDS 361465 362061 . - 0 ID=cds-MHV1764432.1;Parent=gene-AC3ASX_01975;Dbxref=NCBI_GP:MHV1764432.1;Name=MHV1764432.1;Ontology_term=GO:1901135,GO:0008270,GO:0008968,GO:0097367;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014015.1;locus_tag=AC3ASX_01975;product=D-sedoheptulose-7-phosphate isomerase;protein_id=MHV1764432.1;transl_table=11 JBYLIA010000001.1 Genbank gene 362155 362457 . - . ID=gene-AC3ASX_01980;Name=AC3ASX_01980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01980 JBYLIA010000001.1 GeneMarkS-2+ CDS 362155 362457 . - 0 ID=cds-MHV1764433.1;Parent=gene-AC3ASX_01980;Dbxref=NCBI_GP:MHV1764433.1;Name=MHV1764433.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_01980;product=hypothetical protein;protein_id=MHV1764433.1;transl_table=11 JBYLIA010000001.1 Genbank gene 363027 363239 . - . ID=gene-AC3ASX_01985;Name=AC3ASX_01985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01985 JBYLIA010000001.1 GeneMarkS-2+ CDS 363027 363239 . - 0 ID=cds-MHV1764434.1;Parent=gene-AC3ASX_01985;Dbxref=NCBI_GP:MHV1764434.1;Name=MHV1764434.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_01985;product=hypothetical protein;protein_id=MHV1764434.1;transl_table=11 JBYLIA010000001.1 Genbank gene 363789 364208 . + . ID=gene-AC3ASX_01990;Name=AC3ASX_01990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01990 JBYLIA010000001.1 Protein Homology CDS 363789 364208 . + 0 ID=cds-MHV1764435.1;Parent=gene-AC3ASX_01990;Dbxref=NCBI_GP:MHV1764435.1;Name=MHV1764435.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.7;locus_tag=AC3ASX_01990;product=LysR substrate-binding domain-containing protein;protein_id=MHV1764435.1;transl_table=11 JBYLIA010000001.1 Genbank gene 364237 364908 . - . ID=gene-AC3ASX_01995;Name=AC3ASX_01995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_01995 JBYLIA010000001.1 Protein Homology CDS 364237 364908 . - 0 ID=cds-MHV1764436.1;Parent=gene-AC3ASX_01995;Dbxref=NCBI_GP:MHV1764436.1;Name=MHV1764436.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017603.1;locus_tag=AC3ASX_01995;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=MHV1764436.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 364865 365520 . - . ID=gene-AC3ASX_02000;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=pseudogene;locus_tag=AC3ASX_02000;pseudo=true JBYLIA010000001.1 Protein Homology CDS 364865 365520 . - 0 ID=cds-AC3ASX_02000;Parent=gene-AC3ASX_02000;Note=frameshifted%3B internal stop;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038154.1;locus_tag=AC3ASX_02000;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 365603 366817 . + . ID=gene-AC3ASX_02005;Name=AC3ASX_02005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02005;pseudo=true JBYLIA010000001.1 Protein Homology CDS 365603 366817 . + 0 ID=cds-AC3ASX_02005;Parent=gene-AC3ASX_02005;Note=frameshifted%3B internal stop;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038152.1;locus_tag=AC3ASX_02005;product=amino acid permease;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 366844 367519 . - . ID=gene-AC3ASX_02010;Name=AC3ASX_02010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02010;pseudo=true JBYLIA010000001.1 Protein Homology CDS 366844 367519 . - 0 ID=cds-AC3ASX_02010;Parent=gene-AC3ASX_02010;Note=frameshifted;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022652.1;locus_tag=AC3ASX_02010;product=YoaK family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 367933 368598 . + . ID=gene-AC3ASX_02015;Name=AC3ASX_02015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02015 JBYLIA010000001.1 Protein Homology CDS 367933 368598 . + 0 ID=cds-MHV1764437.1;Parent=gene-AC3ASX_02015;Dbxref=NCBI_GP:MHV1764437.1;Name=MHV1764437.1;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038150.1;locus_tag=AC3ASX_02015;product=nitroreductase;protein_id=MHV1764437.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 368668 369628 . + . ID=gene-AC3ASX_02020;Name=AC3ASX_02020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02020;pseudo=true JBYLIA010000001.1 Protein Homology CDS 368668 369628 . + 0 ID=cds-AC3ASX_02020;Parent=gene-AC3ASX_02020;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286763.1;locus_tag=AC3ASX_02020;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 369582 369938 . - . ID=gene-AC3ASX_02025;Name=AC3ASX_02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02025 JBYLIA010000001.1 GeneMarkS-2+ CDS 369582 369938 . - 0 ID=cds-MHV1764438.1;Parent=gene-AC3ASX_02025;Dbxref=NCBI_GP:MHV1764438.1;Name=MHV1764438.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02025;product=cytochrome b;protein_id=MHV1764438.1;transl_table=11 JBYLIA010000001.1 Genbank gene 370221 371216 . - . ID=gene-AC3ASX_02030;Name=AC3ASX_02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02030 JBYLIA010000001.1 Protein Homology CDS 370221 371216 . - 0 ID=cds-MHV1764439.1;Parent=gene-AC3ASX_02030;Dbxref=NCBI_GP:MHV1764439.1;Name=MHV1764439.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549185.1;locus_tag=AC3ASX_02030;product=anion permease;protein_id=MHV1764439.1;transl_table=11 JBYLIA010000001.1 Genbank gene 371234 371890 . - . ID=gene-AC3ASX_02035;Name=AC3ASX_02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02035 JBYLIA010000001.1 Protein Homology CDS 371234 371890 . - 0 ID=cds-MHV1764440.1;Parent=gene-AC3ASX_02035;Dbxref=NCBI_GP:MHV1764440.1;Name=MHV1764440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017784.1;locus_tag=AC3ASX_02035;product=PhoU family transcriptional regulator;protein_id=MHV1764440.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 372136 372939 . - . ID=gene-AC3ASX_02040;Name=AC3ASX_02040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02040;pseudo=true JBYLIA010000001.1 Protein Homology CDS 372136 372939 . - 0 ID=cds-AC3ASX_02040;Parent=gene-AC3ASX_02040;Note=frameshifted%3B internal stop;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549183.1;locus_tag=AC3ASX_02040;product=5-oxoprolinase subunit C family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 372944 373627 . - . ID=gene-AC3ASX_02045;Name=AC3ASX_02045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02045;pseudo=true JBYLIA010000001.1 Protein Homology CDS 372944 373627 . - 0 ID=cds-AC3ASX_02045;Parent=gene-AC3ASX_02045;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003042872.1;locus_tag=AC3ASX_02045;product=LamB/YcsF family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 373637 374179 . - . ID=gene-AC3ASX_02050;Name=AC3ASX_02050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02050;pseudo=true JBYLIA010000001.1 Protein Homology CDS 373637 374179 . - 0 ID=cds-AC3ASX_02050;Parent=gene-AC3ASX_02050;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547404.1;locus_tag=AC3ASX_02050;product=carboxyltransferase domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 374215 375253 . - . ID=gene-AC3ASX_02055;Name=AC3ASX_02055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02055;pseudo=true JBYLIA010000001.1 Protein Homology CDS 374215 375253 . - 0 ID=cds-AC3ASX_02055;Parent=gene-AC3ASX_02055;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549180.1;locus_tag=AC3ASX_02055;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 375320 376156 . - . ID=gene-AC3ASX_02060;Name=AC3ASX_02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02060 JBYLIA010000001.1 Protein Homology CDS 375320 376156 . - 0 ID=cds-MHV1764441.1;Parent=gene-AC3ASX_02060;Dbxref=NCBI_GP:MHV1764441.1;Name=MHV1764441.1;Ontology_term=GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021757.1;locus_tag=AC3ASX_02060;product=universal stress protein;protein_id=MHV1764441.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 376230 378950 . - . ID=gene-AC3ASX_02065;Name=AC3ASX_02065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02065;pseudo=true JBYLIA010000001.1 Protein Homology CDS 376230 378950 . - 0 ID=cds-AC3ASX_02065;Parent=gene-AC3ASX_02065;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021760.1;locus_tag=AC3ASX_02065;product=DUF3427 domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 378934 379554 . - . ID=gene-AC3ASX_02070;Name=AC3ASX_02070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02070;pseudo=true JBYLIA010000001.1 Protein Homology CDS 378934 379554 . - 0 ID=cds-AC3ASX_02070;Parent=gene-AC3ASX_02070;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014154.1;locus_tag=AC3ASX_02070;product=RCC1 domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 379621 380184 . - . ID=gene-AC3ASX_02075;Name=AC3ASX_02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02075 JBYLIA010000001.1 Protein Homology CDS 379621 380184 . - 0 ID=cds-MHV1764442.1;Parent=gene-AC3ASX_02075;Dbxref=NCBI_GP:MHV1764442.1;Name=MHV1764442.1;Ontology_term=GO:0042578;gbkey=CDS;go_function=phosphoric ester hydrolase activity|0042578||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549177.1;locus_tag=AC3ASX_02075;product=YqeG family HAD IIIA-type phosphatase;protein_id=MHV1764442.1;transl_table=11 JBYLIA010000001.1 Genbank gene 380607 381476 . - . ID=gene-AC3ASX_02080;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=AC3ASX_02080 JBYLIA010000001.1 Protein Homology CDS 380607 381476 . - 0 ID=cds-MHV1764443.1;Parent=gene-AC3ASX_02080;Dbxref=NCBI_GP:MHV1764443.1;Name=MHV1764443.1;Ontology_term=GO:0000451,GO:0008649,GO:0008757;gbkey=CDS;gene=rsmI;go_function=rRNA methyltransferase activity|0008649||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=rRNA 2'-O-methylation|0000451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549175.1;locus_tag=AC3ASX_02080;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=MHV1764443.1;transl_table=11 JBYLIA010000001.1 Genbank gene 381469 382824 . - . ID=gene-AC3ASX_02085;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=AC3ASX_02085 JBYLIA010000001.1 Protein Homology CDS 381469 382824 . - 0 ID=cds-MHV1764444.1;Parent=gene-AC3ASX_02085;Dbxref=NCBI_GP:MHV1764444.1;Name=MHV1764444.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280184.1;locus_tag=AC3ASX_02085;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=MHV1764444.1;transl_table=11 JBYLIA010000001.1 Genbank gene 382892 383668 . - . ID=gene-AC3ASX_02090;Name=AC3ASX_02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02090 JBYLIA010000001.1 Protein Homology CDS 382892 383668 . - 0 ID=cds-MHV1764445.1;Parent=gene-AC3ASX_02090;Dbxref=NCBI_GP:MHV1764445.1;Name=MHV1764445.1;Ontology_term=GO:0016616,GO:0030554;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014167.1;locus_tag=AC3ASX_02090;product=shikimate dehydrogenase family protein;protein_id=MHV1764445.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 383842 384242 . + . ID=gene-AC3ASX_02095;Name=AC3ASX_02095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02095;pseudo=true JBYLIA010000001.1 Protein Homology CDS 383842 384242 . + 0 ID=cds-AC3ASX_02095;Parent=gene-AC3ASX_02095;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014551167.1;locus_tag=AC3ASX_02095;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 384333 384467 . + . ID=gene-AC3ASX_02100;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=AC3ASX_02100 JBYLIA010000001.1 Protein Homology CDS 384333 384467 . + 0 ID=cds-MHV1764446.1;Parent=gene-AC3ASX_02100;Dbxref=NCBI_GP:MHV1764446.1;Name=MHV1764446.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011508608.1;locus_tag=AC3ASX_02100;product=50S ribosomal protein L34;protein_id=MHV1764446.1;transl_table=11 JBYLIA010000001.1 Genbank gene 384457 384810 . + . ID=gene-AC3ASX_02105;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=AC3ASX_02105 JBYLIA010000001.1 Protein Homology CDS 384457 384810 . + 0 ID=cds-MHV1764447.1;Parent=gene-AC3ASX_02105;Dbxref=NCBI_GP:MHV1764447.1;Name=MHV1764447.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429867.1;locus_tag=AC3ASX_02105;product=ribonuclease P protein component;protein_id=MHV1764447.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 384786 385035 . + . ID=gene-AC3ASX_02110;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=pseudogene;locus_tag=AC3ASX_02110;pseudo=true JBYLIA010000001.1 Protein Homology CDS 384786 385035 . + 0 ID=cds-AC3ASX_02110;Parent=gene-AC3ASX_02110;Note=frameshifted;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003032707.1;locus_tag=AC3ASX_02110;product=membrane protein insertion efficiency factor YidD;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 385044 386699 . + . ID=gene-AC3ASX_02115;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=AC3ASX_02115 JBYLIA010000001.1 Protein Homology CDS 385044 386699 . + 0 ID=cds-MHV1764448.1;Parent=gene-AC3ASX_02115;Dbxref=NCBI_GP:MHV1764448.1;Name=MHV1764448.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003032704.1;locus_tag=AC3ASX_02115;product=membrane protein insertase YidC;protein_id=MHV1764448.1;transl_table=11 JBYLIA010000001.1 Genbank gene 386706 387605 . + . ID=gene-AC3ASX_02120;Name=AC3ASX_02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02120 JBYLIA010000001.1 Protein Homology CDS 386706 387605 . + 0 ID=cds-MHV1764449.1;Parent=gene-AC3ASX_02120;Dbxref=NCBI_GP:MHV1764449.1;Name=MHV1764449.1;Ontology_term=GO:0016740,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021787.1;locus_tag=AC3ASX_02120;product=lysophospholipid acyltransferase family protein;protein_id=MHV1764449.1;transl_table=11 JBYLIA010000001.1 Genbank gene 387666 388589 . + . ID=gene-AC3ASX_02125;Name=AC3ASX_02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02125 JBYLIA010000001.1 Protein Homology CDS 387666 388589 . + 0 ID=cds-MHV1764450.1;Parent=gene-AC3ASX_02125;Dbxref=NCBI_GP:MHV1764450.1;Name=MHV1764450.1;Ontology_term=GO:0016740,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429870.1;locus_tag=AC3ASX_02125;product=lysophospholipid acyltransferase family protein;protein_id=MHV1764450.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 388601 388670 . + . ID=gene-AC3ASX_02130;Name=AC3ASX_02130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02130;pseudo=true JBYLIA010000001.1 Protein Homology CDS 388601 388670 . + 0 ID=cds-AC3ASX_02130;Parent=gene-AC3ASX_02130;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286433.1;locus_tag=AC3ASX_02130;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 388685 388954 . + . ID=gene-AC3ASX_02135;Name=AC3ASX_02135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02135 JBYLIA010000001.1 Protein Homology CDS 388685 388954 . + 0 ID=cds-MHV1764451.1;Parent=gene-AC3ASX_02135;Dbxref=NCBI_GP:MHV1764451.1;Name=MHV1764451.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF028042.7;locus_tag=AC3ASX_02135;product=type IV pilin protein;protein_id=MHV1764451.1;transl_table=11 JBYLIA010000001.1 Genbank gene 389049 389618 . + . ID=gene-AC3ASX_02140;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=AC3ASX_02140 JBYLIA010000001.1 Protein Homology CDS 389049 389618 . + 0 ID=cds-MHV1764452.1;Parent=gene-AC3ASX_02140;Dbxref=NCBI_GP:MHV1764452.1;Name=MHV1764452.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547387.1;locus_tag=AC3ASX_02140;product=elongation factor P;protein_id=MHV1764452.1;transl_table=11 JBYLIA010000001.1 Genbank gene 389621 390166 . + . ID=gene-AC3ASX_02145;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=AC3ASX_02145 JBYLIA010000001.1 Protein Homology CDS 389621 390166 . + 0 ID=cds-MHV1764453.1;Parent=gene-AC3ASX_02145;Dbxref=NCBI_GP:MHV1764453.1;Name=MHV1764453.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007147001.1;locus_tag=AC3ASX_02145;product=oligoribonuclease;protein_id=MHV1764453.1;transl_table=11 JBYLIA010000001.1 Genbank gene 390398 390610 . + . ID=gene-AC3ASX_02150;Name=AC3ASX_02150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02150 JBYLIA010000001.1 GeneMarkS-2+ CDS 390398 390610 . + 0 ID=cds-MHV1764454.1;Parent=gene-AC3ASX_02150;Dbxref=NCBI_GP:MHV1764454.1;Name=MHV1764454.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02150;product=hypothetical protein;protein_id=MHV1764454.1;transl_table=11 JBYLIA010000001.1 Genbank gene 390889 393132 . + . ID=gene-AC3ASX_02155;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=AC3ASX_02155 JBYLIA010000001.1 Protein Homology CDS 390889 393132 . + 0 ID=cds-MHV1764455.1;Parent=gene-AC3ASX_02155;Dbxref=NCBI_GP:MHV1764455.1;Name=MHV1764455.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003032690.1;locus_tag=AC3ASX_02155;product=Fe(2+) transporter permease subunit FeoB;protein_id=MHV1764455.1;transl_table=11 JBYLIA010000001.1 Genbank gene 393312 395945 . + . ID=gene-AC3ASX_02160;Name=ppdK;gbkey=Gene;gene=ppdK;gene_biotype=protein_coding;locus_tag=AC3ASX_02160 JBYLIA010000001.1 Protein Homology CDS 393312 395945 . + 0 ID=cds-MHV1764456.1;Parent=gene-AC3ASX_02160;Dbxref=NCBI_GP:MHV1764456.1;Name=MHV1764456.1;Ontology_term=GO:0006090,GO:0050242;gbkey=CDS;gene=ppdK;go_function=pyruvate%2C phosphate dikinase activity|0050242||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017636.1;locus_tag=AC3ASX_02160;product=pyruvate%2C phosphate dikinase;protein_id=MHV1764456.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 396301 397039 . + . ID=gene-AC3ASX_02165;Name=AC3ASX_02165;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02165;pseudo=true JBYLIA010000001.1 Protein Homology CDS 396301 397039 . + 0 ID=cds-AC3ASX_02165;Parent=gene-AC3ASX_02165;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547381.1;locus_tag=AC3ASX_02165;product=aminotransferase class IV;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 397029 397216 . + . ID=gene-AC3ASX_02170;Name=AC3ASX_02170;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02170;pseudo=true JBYLIA010000001.1 Protein Homology CDS 397029 397216 . + 0 ID=cds-AC3ASX_02170;Parent=gene-AC3ASX_02170;Note=dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate%3B frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549164.1;locus_tag=AC3ASX_02170;product=3-isopropylmalate dehydratase large subunit;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 397213 397726 . + . ID=gene-AC3ASX_02175;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=pseudogene;locus_tag=AC3ASX_02175;pseudo=true JBYLIA010000001.1 Protein Homology CDS 397213 397726 . + 0 ID=cds-AC3ASX_02175;Parent=gene-AC3ASX_02175;Note=frameshifted%3B internal stop;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547378.1;locus_tag=AC3ASX_02175;product=3-isopropylmalate dehydratase small subunit;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 397797 397970 . + . ID=gene-AC3ASX_02180;Name=AC3ASX_02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02180 JBYLIA010000001.1 Protein Homology CDS 397797 397970 . + 0 ID=cds-MHV1764457.1;Parent=gene-AC3ASX_02180;Dbxref=NCBI_GP:MHV1764457.1;Name=MHV1764457.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: protein motif:HMM:NF012407.7;locus_tag=AC3ASX_02180;product=isocitrate/isopropylmalate family dehydrogenase;protein_id=MHV1764457.1;transl_table=11 JBYLIA010000001.1 Genbank gene 397958 398392 . + . ID=gene-AC3ASX_02185;Name=AC3ASX_02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02185 JBYLIA010000001.1 Protein Homology CDS 397958 398392 . + 0 ID=cds-MHV1764458.1;Parent=gene-AC3ASX_02185;Dbxref=NCBI_GP:MHV1764458.1;Name=MHV1764458.1;Ontology_term=GO:0016616;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;inference=COORDINATES: protein motif:HMM:NF012407.7;locus_tag=AC3ASX_02185;product=isocitrate/isopropylmalate family dehydrogenase;protein_id=MHV1764458.1;transl_table=11 JBYLIA010000001.1 Genbank gene 398456 398590 . - . ID=gene-AC3ASX_02190;Name=AC3ASX_02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02190 JBYLIA010000001.1 GeneMarkS-2+ CDS 398456 398590 . - 0 ID=cds-MHV1764459.1;Parent=gene-AC3ASX_02190;Dbxref=NCBI_GP:MHV1764459.1;Name=MHV1764459.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02190;product=hypothetical protein;protein_id=MHV1764459.1;transl_table=11 JBYLIA010000001.1 Genbank gene 398638 398769 . - . ID=gene-AC3ASX_02195;Name=AC3ASX_02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02195 JBYLIA010000001.1 GeneMarkS-2+ CDS 398638 398769 . - 0 ID=cds-MHV1764460.1;Parent=gene-AC3ASX_02195;Dbxref=NCBI_GP:MHV1764460.1;Name=MHV1764460.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02195;product=hypothetical protein;protein_id=MHV1764460.1;transl_table=11 JBYLIA010000001.1 Genbank gene 398837 398986 . - . ID=gene-AC3ASX_02200;Name=AC3ASX_02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02200 JBYLIA010000001.1 Protein Homology CDS 398837 398986 . - 0 ID=cds-MHV1764461.1;Parent=gene-AC3ASX_02200;Dbxref=NCBI_GP:MHV1764461.1;Name=MHV1764461.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013050.7;locus_tag=AC3ASX_02200;product=POT-type proton-dependent oligopeptide transporter;protein_id=MHV1764461.1;transl_table=11 JBYLIA010000001.1 Genbank gene 399202 399351 . + . ID=gene-AC3ASX_02205;Name=AC3ASX_02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02205 JBYLIA010000001.1 GeneMarkS-2+ CDS 399202 399351 . + 0 ID=cds-MHV1764462.1;Parent=gene-AC3ASX_02205;Dbxref=NCBI_GP:MHV1764462.1;Name=MHV1764462.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02205;product=hypothetical protein;protein_id=MHV1764462.1;transl_table=11 JBYLIA010000001.1 Genbank gene 399613 399741 . + . ID=gene-AC3ASX_02210;Name=AC3ASX_02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02210 JBYLIA010000001.1 Protein Homology CDS 399613 399741 . + 0 ID=cds-MHV1764463.1;Parent=gene-AC3ASX_02210;Dbxref=NCBI_GP:MHV1764463.1;Name=MHV1764463.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012475.7;locus_tag=AC3ASX_02210;product=hypothetical protein;protein_id=MHV1764463.1;transl_table=11 JBYLIA010000001.1 Genbank gene 399713 399862 . + . ID=gene-AC3ASX_02215;Name=AC3ASX_02215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02215 JBYLIA010000001.1 GeneMarkS-2+ CDS 399713 399862 . + 0 ID=cds-MHV1764464.1;Parent=gene-AC3ASX_02215;Dbxref=NCBI_GP:MHV1764464.1;Name=MHV1764464.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02215;product=hypothetical protein;protein_id=MHV1764464.1;transl_table=11 JBYLIA010000001.1 Genbank gene 399965 400138 . + . ID=gene-AC3ASX_02220;Name=AC3ASX_02220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02220 JBYLIA010000001.1 Protein Homology CDS 399965 400138 . + 0 ID=cds-MHV1764465.1;Parent=gene-AC3ASX_02220;Dbxref=NCBI_GP:MHV1764465.1;Name=MHV1764465.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012475.7;locus_tag=AC3ASX_02220;product=hypothetical protein;protein_id=MHV1764465.1;transl_table=11 JBYLIA010000001.1 Genbank gene 400334 400648 . + . ID=gene-AC3ASX_02225;Name=AC3ASX_02225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02225 JBYLIA010000001.1 Protein Homology CDS 400334 400648 . + 0 ID=cds-MHV1764466.1;Parent=gene-AC3ASX_02225;Dbxref=NCBI_GP:MHV1764466.1;Name=MHV1764466.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012475.7;locus_tag=AC3ASX_02225;product=hypothetical protein;protein_id=MHV1764466.1;transl_table=11 JBYLIA010000001.1 Genbank gene 400702 400824 . + . ID=gene-AC3ASX_02230;Name=AC3ASX_02230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02230 JBYLIA010000001.1 Protein Homology CDS 400702 400824 . + 0 ID=cds-MHV1764467.1;Parent=gene-AC3ASX_02230;Dbxref=NCBI_GP:MHV1764467.1;Name=MHV1764467.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019849.7;locus_tag=AC3ASX_02230;product=hypothetical protein;protein_id=MHV1764467.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 400867 402022 . + . ID=gene-AC3ASX_02235;Name=AC3ASX_02235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02235;pseudo=true JBYLIA010000001.1 Protein Homology CDS 400867 402022 . + 0 ID=cds-AC3ASX_02235;Parent=gene-AC3ASX_02235;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549161.1;locus_tag=AC3ASX_02235;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 402574 403062 . + . ID=gene-AC3ASX_02240;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=pseudogene;locus_tag=AC3ASX_02240;pseudo=true JBYLIA010000001.1 Protein Homology CDS 402574 403062 . + 0 ID=cds-AC3ASX_02240;Parent=gene-AC3ASX_02240;Note=frameshifted%3B internal stop;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549160.1;locus_tag=AC3ASX_02240;product=D-aminoacyl-tRNA deacylase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 403418 403720 . + . ID=gene-AC3ASX_02245;Name=AC3ASX_02245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02245 JBYLIA010000001.1 Protein Homology CDS 403418 403720 . + 0 ID=cds-MHV1764468.1;Parent=gene-AC3ASX_02245;Dbxref=NCBI_GP:MHV1764468.1;Name=MHV1764468.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF042869.5;locus_tag=AC3ASX_02245;product=prephenate dehydrogenase dimerization domain-containing protein;protein_id=MHV1764468.1;transl_table=11 JBYLIA010000001.1 Genbank gene 403884 404621 . - . ID=gene-AC3ASX_02250;Name=AC3ASX_02250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02250 JBYLIA010000001.1 Protein Homology CDS 403884 404621 . - 0 ID=cds-MHV1764469.1;Parent=gene-AC3ASX_02250;Dbxref=NCBI_GP:MHV1764469.1;Name=MHV1764469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714157.1;locus_tag=AC3ASX_02250;product=diguanylate cyclase;protein_id=MHV1764469.1;transl_table=11 JBYLIA010000001.1 Genbank gene 404624 405256 . - . ID=gene-AC3ASX_02255;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=AC3ASX_02255 JBYLIA010000001.1 Protein Homology CDS 404624 405256 . - 0 ID=cds-MHV1764470.1;Parent=gene-AC3ASX_02255;Dbxref=NCBI_GP:MHV1764470.1;Name=MHV1764470.1;Ontology_term=GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010031724.1;locus_tag=AC3ASX_02255;product=orotidine-5'-phosphate decarboxylase;protein_id=MHV1764470.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 405363 405882 . - . ID=gene-AC3ASX_02260;Name=AC3ASX_02260;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02260;pseudo=true JBYLIA010000001.1 Protein Homology CDS 405363 405882 . - 0 ID=cds-AC3ASX_02260;Parent=gene-AC3ASX_02260;Note=frameshifted%3B internal stop;Ontology_term=GO:0004106;gbkey=CDS;go_function=chorismate mutase activity|0004106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549155.1;locus_tag=AC3ASX_02260;product=chorismate mutase family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 406272 406364 . + . ID=gene-AC3ASX_02265;Name=AC3ASX_02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02265 JBYLIA010000001.1 Protein Homology CDS 406272 406364 . + 0 ID=cds-MHV1764471.1;Parent=gene-AC3ASX_02265;Dbxref=NCBI_GP:MHV1764471.1;Name=MHV1764471.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018938.7;locus_tag=AC3ASX_02265;product=acyclic terpene utilization AtuA family protein;protein_id=MHV1764471.1;transl_table=11 JBYLIA010000001.1 Genbank gene 406872 407081 . + . ID=gene-AC3ASX_02270;Name=AC3ASX_02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02270 JBYLIA010000001.1 GeneMarkS-2+ CDS 406872 407081 . + 0 ID=cds-MHV1764472.1;Parent=gene-AC3ASX_02270;Dbxref=NCBI_GP:MHV1764472.1;Name=MHV1764472.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02270;product=hypothetical protein;protein_id=MHV1764472.1;transl_table=11 JBYLIA010000001.1 Genbank gene 407217 407471 . + . ID=gene-AC3ASX_02275;Name=AC3ASX_02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02275 JBYLIA010000001.1 Protein Homology CDS 407217 407471 . + 0 ID=cds-MHV1764473.1;Parent=gene-AC3ASX_02275;Dbxref=NCBI_GP:MHV1764473.1;Name=MHV1764473.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025688.7;locus_tag=AC3ASX_02275;product=DUF4387 family protein;protein_id=MHV1764473.1;transl_table=11 JBYLIA010000001.1 Genbank gene 407893 408624 . - . ID=gene-AC3ASX_02280;Name=AC3ASX_02280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02280 JBYLIA010000001.1 Protein Homology CDS 407893 408624 . - 0 ID=cds-MHV1764474.1;Parent=gene-AC3ASX_02280;Dbxref=NCBI_GP:MHV1764474.1;Name=MHV1764474.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016241.7;locus_tag=AC3ASX_02280;product=DUF481 domain-containing protein;protein_id=MHV1764474.1;transl_table=11 JBYLIA010000001.1 Genbank gene 409078 410424 . - . ID=gene-AC3ASX_02285;Name=AC3ASX_02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02285 JBYLIA010000001.1 Protein Homology CDS 409078 410424 . - 0 ID=cds-MHV1764475.1;Parent=gene-AC3ASX_02285;Dbxref=NCBI_GP:MHV1764475.1;Name=MHV1764475.1;Ontology_term=GO:0016812;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in cyclic amides|0016812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280228.1;locus_tag=AC3ASX_02285;product=dihydroorotase;protein_id=MHV1764475.1;transl_table=11 JBYLIA010000001.1 Genbank gene 410570 410722 . - . ID=gene-AC3ASX_02290;Name=AC3ASX_02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02290 JBYLIA010000001.1 GeneMarkS-2+ CDS 410570 410722 . - 0 ID=cds-MHV1764476.1;Parent=gene-AC3ASX_02290;Dbxref=NCBI_GP:MHV1764476.1;Name=MHV1764476.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02290;product=hypothetical protein;protein_id=MHV1764476.1;transl_table=11 JBYLIA010000001.1 Genbank gene 411173 411505 . - . ID=gene-AC3ASX_02295;Name=AC3ASX_02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02295 JBYLIA010000001.1 Protein Homology CDS 411173 411505 . - 0 ID=cds-MHV1764477.1;Parent=gene-AC3ASX_02295;Dbxref=NCBI_GP:MHV1764477.1;Name=MHV1764477.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012548.7;locus_tag=AC3ASX_02295;product=histidine phosphatase family protein;protein_id=MHV1764477.1;transl_table=11 JBYLIA010000001.1 Genbank gene 411950 413116 . + . ID=gene-AC3ASX_02300;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=AC3ASX_02300 JBYLIA010000001.1 Protein Homology CDS 411950 413116 . + 0 ID=cds-MHV1764478.1;Parent=gene-AC3ASX_02300;Dbxref=NCBI_GP:MHV1764478.1;Name=MHV1764478.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,L-glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286814.1;locus_tag=AC3ASX_02300;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=MHV1764478.1;transl_table=11 JBYLIA010000001.1 Genbank gene 413121 416405 . + . ID=gene-AC3ASX_02305;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=AC3ASX_02305 JBYLIA010000001.1 Protein Homology CDS 413121 416405 . + 0 ID=cds-MHV1764479.1;Parent=gene-AC3ASX_02305;Dbxref=NCBI_GP:MHV1764479.1;Name=MHV1764479.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013921812.1;locus_tag=AC3ASX_02305;product=carbamoyl-phosphate synthase large subunit;protein_id=MHV1764479.1;transl_table=11 JBYLIA010000001.1 Genbank gene 416593 417516 . + . ID=gene-AC3ASX_02310;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=AC3ASX_02310 JBYLIA010000001.1 Protein Homology CDS 416593 417516 . + 0 ID=cds-MHV1764480.1;Parent=gene-AC3ASX_02310;Dbxref=NCBI_GP:MHV1764480.1;Name=MHV1764480.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547359.1;locus_tag=AC3ASX_02310;product=aspartate carbamoyltransferase;protein_id=MHV1764480.1;transl_table=11 JBYLIA010000001.1 Genbank gene 417673 418896 . + . ID=gene-AC3ASX_02315;Name=AC3ASX_02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02315 JBYLIA010000001.1 Protein Homology CDS 417673 418896 . + 0 ID=cds-MHV1764481.1;Parent=gene-AC3ASX_02315;Dbxref=NCBI_GP:MHV1764481.1;Name=MHV1764481.1;Ontology_term=GO:0003333;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429022.1;locus_tag=AC3ASX_02315;product=aromatic amino acid transport family protein;protein_id=MHV1764481.1;transl_table=11 JBYLIA010000001.1 Genbank gene 418955 419373 . + . ID=gene-AC3ASX_02320;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=AC3ASX_02320 JBYLIA010000001.1 cmsearch tmRNA 418955 419373 . + . ID=rna-AC3ASX_02320;Parent=gene-AC3ASX_02320;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_02320;product=transfer-messenger RNA JBYLIA010000001.1 cmsearch exon 418955 419373 . + . ID=exon-AC3ASX_02320-1;Parent=rna-AC3ASX_02320;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_02320;product=transfer-messenger RNA JBYLIA010000001.1 Genbank pseudogene 419399 419653 . - . ID=gene-AC3ASX_02325;Name=AC3ASX_02325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02325;pseudo=true JBYLIA010000001.1 Protein Homology CDS 419399 419653 . - 0 ID=cds-AC3ASX_02325;Parent=gene-AC3ASX_02325;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021760.1;locus_tag=AC3ASX_02325;product=phospholipase D-like domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 419637 420257 . - . ID=gene-AC3ASX_02330;Name=AC3ASX_02330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02330;pseudo=true JBYLIA010000001.1 Protein Homology CDS 419637 420257 . - 0 ID=cds-AC3ASX_02330;Parent=gene-AC3ASX_02330;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014154.1;locus_tag=AC3ASX_02330;product=RCC1 domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 420262 420405 . + . ID=gene-AC3ASX_02335;Name=AC3ASX_02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02335 JBYLIA010000001.1 GeneMarkS-2+ CDS 420262 420405 . + 0 ID=cds-MHV1764482.1;Parent=gene-AC3ASX_02335;Dbxref=NCBI_GP:MHV1764482.1;Name=MHV1764482.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02335;product=hypothetical protein;protein_id=MHV1764482.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 421169 421251 . + . ID=gene-AC3ASX_02340;Name=AC3ASX_02340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02340;pseudo=true JBYLIA010000001.1 Protein Homology CDS 421169 421251 . + 0 ID=cds-AC3ASX_02340;Parent=gene-AC3ASX_02340;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017717.8;locus_tag=AC3ASX_02340;product=AlpA family phage regulatory protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 423252 423359 . - . ID=gene-AC3ASX_02345;Name=AC3ASX_02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02345 JBYLIA010000001.1 Protein Homology CDS 423252 423359 . - 0 ID=cds-MHV1764483.1;Parent=gene-AC3ASX_02345;Dbxref=NCBI_GP:MHV1764483.1;Name=MHV1764483.1;Ontology_term=GO:0030001,GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=metal ion transport|0030001||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013694.7;locus_tag=AC3ASX_02345;product=CorA family divalent cation transporter;protein_id=MHV1764483.1;transl_table=11 JBYLIA010000001.1 Genbank gene 423755 424858 . - . ID=gene-AC3ASX_02350;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=AC3ASX_02350 JBYLIA010000001.1 Protein Homology CDS 423755 424858 . - 0 ID=cds-MHV1764484.1;Parent=gene-AC3ASX_02350;Dbxref=NCBI_GP:MHV1764484.1;Name=MHV1764484.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286830.1;locus_tag=AC3ASX_02350;product=DNA polymerase III subunit beta;protein_id=MHV1764484.1;transl_table=11 JBYLIA010000001.1 Genbank gene 424895 426370 . - . ID=gene-AC3ASX_02355;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=AC3ASX_02355 JBYLIA010000001.1 Protein Homology CDS 424895 426370 . - 0 ID=cds-MHV1764485.1;Parent=gene-AC3ASX_02355;Dbxref=NCBI_GP:MHV1764485.1;Name=MHV1764485.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011648534.1;locus_tag=AC3ASX_02355;product=chromosomal replication initiator protein DnaA;protein_id=MHV1764485.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 426839 428292 . + . ID=gene-AC3ASX_02360;Name=AC3ASX_02360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02360;pseudo=true JBYLIA010000001.1 Protein Homology CDS 426839 428292 . + 0 ID=cds-AC3ASX_02360;Parent=gene-AC3ASX_02360;Note=frameshifted%3B internal stop;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549127.1;locus_tag=AC3ASX_02360;product=Rne/Rng family ribonuclease;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 428397 428472 . + . ID=gene-AC3ASX_02365;Name=AC3ASX_02365;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_02365 JBYLIA010000001.1 tRNAscan-SE tRNA 428397 428472 . + . ID=rna-AC3ASX_02365;Parent=gene-AC3ASX_02365;anticodon=(pos:428430..428432);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_02365;product=tRNA-Thr JBYLIA010000001.1 tRNAscan-SE exon 428397 428472 . + . ID=exon-AC3ASX_02365-1;Parent=rna-AC3ASX_02365;anticodon=(pos:428430..428432);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_02365;product=tRNA-Thr JBYLIA010000001.1 Genbank gene 428477 428553 . + . ID=gene-AC3ASX_02370;Name=AC3ASX_02370;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_02370 JBYLIA010000001.1 tRNAscan-SE tRNA 428477 428553 . + . ID=rna-AC3ASX_02370;Parent=gene-AC3ASX_02370;anticodon=(pos:428511..428513);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_02370;product=tRNA-Asp JBYLIA010000001.1 tRNAscan-SE exon 428477 428553 . + . ID=exon-AC3ASX_02370-1;Parent=rna-AC3ASX_02370;anticodon=(pos:428511..428513);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_02370;product=tRNA-Asp JBYLIA010000001.1 Genbank pseudogene 429026 429215 . + . ID=gene-AC3ASX_02375;Name=AC3ASX_02375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02375;pseudo=true JBYLIA010000001.1 Protein Homology CDS 429026 429215 . + 0 ID=cds-AC3ASX_02375;Parent=gene-AC3ASX_02375;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549126.1;locus_tag=AC3ASX_02375;product=trp operon repressor;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 429227 430751 . + . ID=gene-AC3ASX_02380;Name=AC3ASX_02380;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02380;pseudo=true JBYLIA010000001.1 Protein Homology CDS 429227 430751 . + 0 ID=cds-AC3ASX_02380;Parent=gene-AC3ASX_02380;Note=frameshifted%3B internal stop;Ontology_term=GO:0009058,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550358.1;locus_tag=AC3ASX_02380;product=anthranilate synthase component 1;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 430751 431225 . + . ID=gene-AC3ASX_02385;Name=AC3ASX_02385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02385;pseudo=true JBYLIA010000001.1 Protein Homology CDS 430751 431225 . + 0 ID=cds-AC3ASX_02385;Parent=gene-AC3ASX_02385;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003013838.1;locus_tag=AC3ASX_02385;product=glutamine amidotransferase-related protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 431459 432820 . + . ID=gene-AC3ASX_02390;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=AC3ASX_02390 JBYLIA010000001.1 Protein Homology CDS 431459 432820 . + 0 ID=cds-MHV1764486.1;Parent=gene-AC3ASX_02390;Dbxref=NCBI_GP:MHV1764486.1;Name=MHV1764486.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037973.1;locus_tag=AC3ASX_02390;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=MHV1764486.1;transl_table=11 JBYLIA010000001.1 Genbank gene 432817 433245 . - . ID=gene-AC3ASX_02395;Name=AC3ASX_02395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02395 JBYLIA010000001.1 Protein Homology CDS 432817 433245 . - 0 ID=cds-MHV1764487.1;Parent=gene-AC3ASX_02395;Dbxref=NCBI_GP:MHV1764487.1;Name=MHV1764487.1;Ontology_term=GO:0009408,GO:0042802;gbkey=CDS;go_function=identical protein binding|0042802||IEA;go_process=response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003013862.1;locus_tag=AC3ASX_02395;product=Hsp20/alpha crystallin family protein;protein_id=MHV1764487.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 433539 435327 . + . ID=gene-AC3ASX_02400;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=pseudogene;locus_tag=AC3ASX_02400;pseudo=true JBYLIA010000001.1 Protein Homology CDS 433539 435327 . + 0 ID=cds-AC3ASX_02400;Parent=gene-AC3ASX_02400;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011648800.1;locus_tag=AC3ASX_02400;product=aminopeptidase N;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 435611 435940 . + . ID=gene-AC3ASX_02405;Name=AC3ASX_02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02405 JBYLIA010000001.1 GeneMarkS-2+ CDS 435611 435940 . + 0 ID=cds-MHV1764488.1;Parent=gene-AC3ASX_02405;Dbxref=NCBI_GP:MHV1764488.1;Name=MHV1764488.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02405;product=hypothetical protein;protein_id=MHV1764488.1;transl_table=11 JBYLIA010000001.1 Genbank gene 435964 436167 . + . ID=gene-AC3ASX_02410;Name=AC3ASX_02410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02410 JBYLIA010000001.1 GeneMarkS-2+ CDS 435964 436167 . + 0 ID=cds-MHV1764489.1;Parent=gene-AC3ASX_02410;Dbxref=NCBI_GP:MHV1764489.1;Name=MHV1764489.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02410;product=hypothetical protein;protein_id=MHV1764489.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 436546 436983 . - . ID=gene-AC3ASX_02415;Name=AC3ASX_02415;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02415;pseudo=true JBYLIA010000001.1 Protein Homology CDS 436546 436983 . - 0 ID=cds-AC3ASX_02415;Parent=gene-AC3ASX_02415;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003027616.1;locus_tag=AC3ASX_02415;product=MBL fold metallo-hydrolase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 437183 437379 . + . ID=gene-AC3ASX_02420;Name=AC3ASX_02420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02420;pseudo=true JBYLIA010000001.1 Protein Homology CDS 437183 437379 . + 0 ID=cds-AC3ASX_02420;Parent=gene-AC3ASX_02420;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037958.1;locus_tag=AC3ASX_02420;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 437783 439441 . + . ID=gene-AC3ASX_02425;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=pseudogene;locus_tag=AC3ASX_02425;pseudo=true JBYLIA010000001.1 Protein Homology CDS 437783 439441 . + 0 ID=cds-AC3ASX_02425;Parent=gene-AC3ASX_02425;Note=internal stop;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011370826.1;locus_tag=AC3ASX_02425;product=energy-dependent translational throttle protein EttA;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 440000 440566 . + . ID=gene-AC3ASX_02430;Name=AC3ASX_02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02430 JBYLIA010000001.1 Protein Homology CDS 440000 440566 . + 0 ID=cds-MHV1764490.1;Parent=gene-AC3ASX_02430;Dbxref=NCBI_GP:MHV1764490.1;Name=MHV1764490.1;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: protein motif:HMM:NF012607.7;locus_tag=AC3ASX_02430;product=NAD(P)-dependent oxidoreductase;protein_id=MHV1764490.1;transl_table=11 JBYLIA010000001.1 Genbank gene 440681 440806 . - . ID=gene-AC3ASX_02435;Name=AC3ASX_02435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02435 JBYLIA010000001.1 GeneMarkS-2+ CDS 440681 440806 . - 0 ID=cds-MHV1764491.1;Parent=gene-AC3ASX_02435;Dbxref=NCBI_GP:MHV1764491.1;Name=MHV1764491.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02435;product=hypothetical protein;protein_id=MHV1764491.1;transl_table=11 JBYLIA010000001.1 Genbank gene 440748 440981 . + . ID=gene-AC3ASX_02440;Name=AC3ASX_02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02440 JBYLIA010000001.1 Protein Homology CDS 440748 440981 . + 0 ID=cds-MHV1764492.1;Parent=gene-AC3ASX_02440;Dbxref=NCBI_GP:MHV1764492.1;Name=MHV1764492.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014841.7;locus_tag=AC3ASX_02440;product=hypothetical protein;protein_id=MHV1764492.1;transl_table=11 JBYLIA010000001.1 Genbank gene 441324 441401 . - . ID=gene-AC3ASX_02445;Name=AC3ASX_02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02445 JBYLIA010000001.1 Protein Homology CDS 441324 441401 . - 0 ID=cds-MHV1764493.1;Parent=gene-AC3ASX_02445;Dbxref=NCBI_GP:MHV1764493.1;Name=MHV1764493.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019144.7;locus_tag=AC3ASX_02445;product=hypothetical protein;protein_id=MHV1764493.1;transl_table=11 JBYLIA010000001.1 Genbank gene 441389 441562 . - . ID=gene-AC3ASX_02450;Name=AC3ASX_02450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02450 JBYLIA010000001.1 Protein Homology CDS 441389 441562 . - 0 ID=cds-MHV1764494.1;Parent=gene-AC3ASX_02450;Dbxref=NCBI_GP:MHV1764494.1;Name=MHV1764494.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019144.7;locus_tag=AC3ASX_02450;product=hypothetical protein;protein_id=MHV1764494.1;transl_table=11 JBYLIA010000001.1 Genbank gene 441728 441871 . - . ID=gene-AC3ASX_02455;Name=AC3ASX_02455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02455 JBYLIA010000001.1 Protein Homology CDS 441728 441871 . - 0 ID=cds-MHV1764495.1;Parent=gene-AC3ASX_02455;Dbxref=NCBI_GP:MHV1764495.1;Name=MHV1764495.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012911.7;locus_tag=AC3ASX_02455;product=acylphosphatase;protein_id=MHV1764495.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 442007 442129 . - . ID=gene-AC3ASX_02460;Name=AC3ASX_02460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02460;pseudo=true JBYLIA010000001.1 Protein Homology CDS 442007 442129 . - 0 ID=cds-AC3ASX_02460;Parent=gene-AC3ASX_02460;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012787.7;locus_tag=AC3ASX_02460;product=thioredoxin-dependent thiol peroxidase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 442490 443456 . - . ID=gene-AC3ASX_02465;Name=AC3ASX_02465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02465;pseudo=true JBYLIA010000001.1 Protein Homology CDS 442490 443456 . - 0 ID=cds-AC3ASX_02465;Parent=gene-AC3ASX_02465;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018298760.1;locus_tag=AC3ASX_02465;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 443491 443996 . - . ID=gene-AC3ASX_02470;Name=AC3ASX_02470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02470;pseudo=true JBYLIA010000001.1 Protein Homology CDS 443491 443996 . - 0 ID=cds-AC3ASX_02470;Parent=gene-AC3ASX_02470;Note=frameshifted;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003024334.1;locus_tag=AC3ASX_02470;product=cytochrome b;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 444070 444956 . - . ID=gene-AC3ASX_02475;Name=AC3ASX_02475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02475;pseudo=true JBYLIA010000001.1 Protein Homology CDS 444070 444956 . - 0 ID=cds-AC3ASX_02475;Parent=gene-AC3ASX_02475;Note=frameshifted%3B internal stop;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549096.1;locus_tag=AC3ASX_02475;product=Rieske 2Fe-2S domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 445075 445903 . + . ID=gene-AC3ASX_02480;Name=AC3ASX_02480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02480;pseudo=true JBYLIA010000001.1 Protein Homology CDS 445075 445903 . + 0 ID=cds-AC3ASX_02480;Parent=gene-AC3ASX_02480;Note=frameshifted%3B internal stop;Ontology_term=GO:0006814,GO:0006885,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014054.1;locus_tag=AC3ASX_02480;product=Na+/H+ antiporter NhaA;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 446019 446738 . + . ID=gene-AC3ASX_02485;Name=AC3ASX_02485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02485 JBYLIA010000001.1 Protein Homology CDS 446019 446738 . + 0 ID=cds-MHV1764496.1;Parent=gene-AC3ASX_02485;Dbxref=NCBI_GP:MHV1764496.1;Name=MHV1764496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022781.1;locus_tag=AC3ASX_02485;product=endonuclease/exonuclease/phosphatase family protein;protein_id=MHV1764496.1;transl_table=11 JBYLIA010000001.1 Genbank gene 446744 447484 . - . ID=gene-AC3ASX_02490;Name=AC3ASX_02490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02490 JBYLIA010000001.1 Protein Homology CDS 446744 447484 . - 0 ID=cds-MHV1764497.1;Parent=gene-AC3ASX_02490;Dbxref=NCBI_GP:MHV1764497.1;Name=MHV1764497.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010032291.1;locus_tag=AC3ASX_02490;product=lysophospholipid acyltransferase family protein;protein_id=MHV1764497.1;transl_table=11 JBYLIA010000001.1 Genbank gene 447498 448250 . - . ID=gene-AC3ASX_02495;Name=AC3ASX_02495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02495 JBYLIA010000001.1 Protein Homology CDS 447498 448250 . - 0 ID=cds-MHV1764498.1;Parent=gene-AC3ASX_02495;Dbxref=NCBI_GP:MHV1764498.1;Name=MHV1764498.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003024407.1;locus_tag=AC3ASX_02495;product=lysophospholipid acyltransferase family protein;protein_id=MHV1764498.1;transl_table=11 JBYLIA010000001.1 Genbank gene 448374 448703 . + . ID=gene-AC3ASX_02500;Name=AC3ASX_02500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02500 JBYLIA010000001.1 GeneMarkS-2+ CDS 448374 448703 . + 0 ID=cds-MHV1764499.1;Parent=gene-AC3ASX_02500;Dbxref=NCBI_GP:MHV1764499.1;Name=MHV1764499.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02500;product=hypothetical protein;protein_id=MHV1764499.1;transl_table=11 JBYLIA010000001.1 Genbank gene 449122 449244 . + . ID=gene-AC3ASX_02505;Name=AC3ASX_02505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02505 JBYLIA010000001.1 GeneMarkS-2+ CDS 449122 449244 . + 0 ID=cds-MHV1764500.1;Parent=gene-AC3ASX_02505;Dbxref=NCBI_GP:MHV1764500.1;Name=MHV1764500.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02505;product=hypothetical protein;protein_id=MHV1764500.1;transl_table=11 JBYLIA010000001.1 Genbank gene 449785 450042 . + . ID=gene-AC3ASX_02510;Name=AC3ASX_02510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02510 JBYLIA010000001.1 GeneMarkS-2+ CDS 449785 450042 . + 0 ID=cds-MHV1764501.1;Parent=gene-AC3ASX_02510;Dbxref=NCBI_GP:MHV1764501.1;Name=MHV1764501.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02510;product=hypothetical protein;protein_id=MHV1764501.1;transl_table=11 JBYLIA010000001.1 Genbank gene 451252 451377 . + . ID=gene-AC3ASX_02515;Name=AC3ASX_02515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02515 JBYLIA010000001.1 GeneMarkS-2+ CDS 451252 451377 . + 0 ID=cds-MHV1764502.1;Parent=gene-AC3ASX_02515;Dbxref=NCBI_GP:MHV1764502.1;Name=MHV1764502.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02515;product=hypothetical protein;protein_id=MHV1764502.1;transl_table=11 JBYLIA010000001.1 Genbank gene 451425 451811 . + . ID=gene-AC3ASX_02520;Name=iglH;gbkey=Gene;gene=iglH;gene_biotype=protein_coding;locus_tag=AC3ASX_02520 JBYLIA010000001.1 Protein Homology CDS 451425 451811 . + 0 ID=cds-MHV1764503.1;Parent=gene-AC3ASX_02520;Dbxref=NCBI_GP:MHV1764503.1;Name=MHV1764503.1;gbkey=CDS;gene=iglH;inference=COORDINATES: protein motif:HMM:NF041246.1;locus_tag=AC3ASX_02520;product=type VI secretion system baseplate subunit TssF/IglH;protein_id=MHV1764503.1;transl_table=11 JBYLIA010000001.1 Genbank gene 452869 453711 . - . ID=gene-AC3ASX_02525;Name=AC3ASX_02525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02525 JBYLIA010000001.1 Protein Homology CDS 452869 453711 . - 0 ID=cds-MHV1764504.1;Parent=gene-AC3ASX_02525;Dbxref=NCBI_GP:MHV1764504.1;Name=MHV1764504.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013166.7;locus_tag=AC3ASX_02525;product=phosphopantetheine-binding protein;protein_id=MHV1764504.1;transl_table=11 JBYLIA010000001.1 Genbank gene 453781 454545 . - . ID=gene-AC3ASX_02530;Name=AC3ASX_02530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02530 JBYLIA010000001.1 Protein Homology CDS 453781 454545 . - 0 ID=cds-MHV1764505.1;Parent=gene-AC3ASX_02530;Dbxref=NCBI_GP:MHV1764505.1;Name=MHV1764505.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.7;locus_tag=AC3ASX_02530;product=AMP-binding protein;protein_id=MHV1764505.1;transl_table=11 JBYLIA010000001.1 Genbank gene 454649 455218 . - . ID=gene-AC3ASX_02535;Name=AC3ASX_02535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02535 JBYLIA010000001.1 Protein Homology CDS 454649 455218 . - 0 ID=cds-MHV1764506.1;Parent=gene-AC3ASX_02535;Dbxref=NCBI_GP:MHV1764506.1;Name=MHV1764506.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.7;locus_tag=AC3ASX_02535;product=AMP-binding protein;protein_id=MHV1764506.1;transl_table=11 JBYLIA010000001.1 Genbank gene 455342 455614 . - . ID=gene-AC3ASX_02540;Name=AC3ASX_02540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02540 JBYLIA010000001.1 Protein Homology CDS 455342 455614 . - 0 ID=cds-MHV1764507.1;Parent=gene-AC3ASX_02540;Dbxref=NCBI_GP:MHV1764507.1;Name=MHV1764507.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016109.7;locus_tag=AC3ASX_02540;product=SemiSWEET family sugar transporter;protein_id=MHV1764507.1;transl_table=11 JBYLIA010000001.1 Genbank gene 455644 456027 . - . ID=gene-AC3ASX_02545;Name=AC3ASX_02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02545 JBYLIA010000001.1 GeneMarkS-2+ CDS 455644 456027 . - 0 ID=cds-MHV1764508.1;Parent=gene-AC3ASX_02545;Dbxref=NCBI_GP:MHV1764508.1;Name=MHV1764508.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02545;product=hypothetical protein;protein_id=MHV1764508.1;transl_table=11 JBYLIA010000001.1 Genbank gene 456081 456359 . - . ID=gene-AC3ASX_02550;Name=AC3ASX_02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02550 JBYLIA010000001.1 Protein Homology CDS 456081 456359 . - 0 ID=cds-MHV1764509.1;Parent=gene-AC3ASX_02550;Dbxref=NCBI_GP:MHV1764509.1;Name=MHV1764509.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020037.7;locus_tag=AC3ASX_02550;product=PAS domain-containing protein;protein_id=MHV1764509.1;transl_table=11 JBYLIA010000001.1 Genbank gene 456393 456605 . - . ID=gene-AC3ASX_02555;Name=AC3ASX_02555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02555 JBYLIA010000001.1 GeneMarkS-2+ CDS 456393 456605 . - 0 ID=cds-MHV1764510.1;Parent=gene-AC3ASX_02555;Dbxref=NCBI_GP:MHV1764510.1;Name=MHV1764510.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02555;product=hypothetical protein;protein_id=MHV1764510.1;transl_table=11 JBYLIA010000001.1 Genbank gene 457658 457921 . + . ID=gene-AC3ASX_02560;Name=AC3ASX_02560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02560 JBYLIA010000001.1 GeneMarkS-2+ CDS 457658 457921 . + 0 ID=cds-MHV1764511.1;Parent=gene-AC3ASX_02560;Dbxref=NCBI_GP:MHV1764511.1;Name=MHV1764511.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02560;product=hypothetical protein;protein_id=MHV1764511.1;transl_table=11 JBYLIA010000001.1 Genbank gene 458036 458200 . + . ID=gene-AC3ASX_02565;Name=AC3ASX_02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02565 JBYLIA010000001.1 GeneMarkS-2+ CDS 458036 458200 . + 0 ID=cds-MHV1764512.1;Parent=gene-AC3ASX_02565;Dbxref=NCBI_GP:MHV1764512.1;Name=MHV1764512.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02565;product=hypothetical protein;protein_id=MHV1764512.1;transl_table=11 JBYLIA010000001.1 Genbank gene 458562 458726 . + . ID=gene-AC3ASX_02570;Name=AC3ASX_02570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02570 JBYLIA010000001.1 Protein Homology CDS 458562 458726 . + 0 ID=cds-MHV1764513.1;Parent=gene-AC3ASX_02570;Dbxref=NCBI_GP:MHV1764513.1;Name=MHV1764513.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037479.8;locus_tag=AC3ASX_02570;product=hypothetical protein;protein_id=MHV1764513.1;transl_table=11 JBYLIA010000001.1 Genbank gene 459134 459472 . + . ID=gene-AC3ASX_02575;Name=AC3ASX_02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02575 JBYLIA010000001.1 GeneMarkS-2+ CDS 459134 459472 . + 0 ID=cds-MHV1764514.1;Parent=gene-AC3ASX_02575;Dbxref=NCBI_GP:MHV1764514.1;Name=MHV1764514.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02575;product=hypothetical protein;protein_id=MHV1764514.1;transl_table=11 JBYLIA010000001.1 Genbank gene 459867 460190 . - . ID=gene-AC3ASX_02580;Name=fdxA;gbkey=Gene;gene=fdxA;gene_biotype=protein_coding;locus_tag=AC3ASX_02580 JBYLIA010000001.1 Protein Homology CDS 459867 460190 . - 0 ID=cds-MHV1764515.1;Parent=gene-AC3ASX_02580;Dbxref=NCBI_GP:MHV1764515.1;Name=MHV1764515.1;Ontology_term=GO:0009055,GO:0051539;gbkey=CDS;gene=fdxA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013923683.1;locus_tag=AC3ASX_02580;product=ferredoxin FdxA;protein_id=MHV1764515.1;transl_table=11 JBYLIA010000001.1 Genbank gene 460420 461073 . + . ID=gene-AC3ASX_02585;Name=AC3ASX_02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02585 JBYLIA010000001.1 Protein Homology CDS 460420 461073 . + 0 ID=cds-MHV1764516.1;Parent=gene-AC3ASX_02585;Dbxref=NCBI_GP:MHV1764516.1;Name=MHV1764516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013923682.1;locus_tag=AC3ASX_02585;product=Frag1/DRAM/Sfk1 family protein;protein_id=MHV1764516.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 461134 461431 . + . ID=gene-AC3ASX_02590;Name=AC3ASX_02590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02590;pseudo=true JBYLIA010000001.1 Protein Homology CDS 461134 461431 . + 0 ID=cds-AC3ASX_02590;Parent=gene-AC3ASX_02590;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339855.1;locus_tag=AC3ASX_02590;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 461433 464045 . - . ID=gene-AC3ASX_02595;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=AC3ASX_02595 JBYLIA010000001.1 Protein Homology CDS 461433 464045 . - 0 ID=cds-MHV1764517.1;Parent=gene-AC3ASX_02595;Dbxref=NCBI_GP:MHV1764517.1;Name=MHV1764517.1;Ontology_term=GO:0009408,GO:0042026,GO:0005737;gbkey=CDS;gene=clpB;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015005115.1;locus_tag=AC3ASX_02595;product=ATP-dependent chaperone ClpB;protein_id=MHV1764517.1;transl_table=11 JBYLIA010000001.1 Genbank gene 464354 464500 . + . ID=gene-AC3ASX_02600;Name=AC3ASX_02600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02600 JBYLIA010000001.1 Protein Homology CDS 464354 464500 . + 0 ID=cds-MHV1764518.1;Parent=gene-AC3ASX_02600;Dbxref=NCBI_GP:MHV1764518.1;Name=MHV1764518.1;Ontology_term=GO:0034258,GO:0034257,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nicotinamide riboside transmembrane transporter activity|0034257||IEA;go_process=nicotinamide riboside transport|0034258||IEA;inference=COORDINATES: protein motif:HMM:NF016837.7;locus_tag=AC3ASX_02600;product=nicotinamide mononucleotide transporter;protein_id=MHV1764518.1;transl_table=11 JBYLIA010000001.1 Genbank gene 464637 464897 . + . ID=gene-AC3ASX_02605;Name=AC3ASX_02605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02605 JBYLIA010000001.1 GeneMarkS-2+ CDS 464637 464897 . + 0 ID=cds-MHV1764519.1;Parent=gene-AC3ASX_02605;Dbxref=NCBI_GP:MHV1764519.1;Name=MHV1764519.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02605;product=hypothetical protein;protein_id=MHV1764519.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 464986 465298 . + . ID=gene-AC3ASX_02610;Name=AC3ASX_02610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02610;pseudo=true JBYLIA010000001.1 Protein Homology CDS 464986 465298 . + 0 ID=cds-AC3ASX_02610;Parent=gene-AC3ASX_02610;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011733734.1;locus_tag=AC3ASX_02610;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 465386 466029 . - . ID=gene-AC3ASX_02615;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=pseudogene;locus_tag=AC3ASX_02615;pseudo=true JBYLIA010000001.1 Protein Homology CDS 465386 466029 . - 0 ID=cds-AC3ASX_02615;Parent=gene-AC3ASX_02615;Note=frameshifted%3B internal stop;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014080.1;locus_tag=AC3ASX_02615;product=tryptophan synthase subunit alpha;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 466032 467232 . - . ID=gene-AC3ASX_02620;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=pseudogene;locus_tag=AC3ASX_02620;pseudo=true JBYLIA010000001.1 Protein Homology CDS 466032 467232 . - 0 ID=cds-AC3ASX_02620;Parent=gene-AC3ASX_02620;Note=frameshifted%3B internal stop;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003040724.1;locus_tag=AC3ASX_02620;product=tryptophan synthase subunit beta;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 467329 468481 . - . ID=gene-AC3ASX_02625;Name=AC3ASX_02625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02625;pseudo=true JBYLIA010000001.1 Protein Homology CDS 467329 468481 . - 0 ID=cds-AC3ASX_02625;Parent=gene-AC3ASX_02625;Note=frameshifted%3B internal stop;Ontology_term=GO:0008237,GO:0008270;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011733733.1;locus_tag=AC3ASX_02625;product=gluzincin family metallopeptidase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 468417 469814 . - . ID=gene-AC3ASX_02630;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=pseudogene;locus_tag=AC3ASX_02630;pseudo=true JBYLIA010000001.1 Protein Homology CDS 468417 469814 . - 0 ID=cds-AC3ASX_02630;Parent=gene-AC3ASX_02630;Note=internal stop;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286891.1;locus_tag=AC3ASX_02630;product=H(+)/Cl(-) exchange transporter ClcA;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 469907 470305 . - . ID=gene-AC3ASX_02635;Name=AC3ASX_02635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02635 JBYLIA010000001.1 Protein Homology CDS 469907 470305 . - 0 ID=cds-MHV1764520.1;Parent=gene-AC3ASX_02635;Dbxref=NCBI_GP:MHV1764520.1;Name=MHV1764520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003032563.1;locus_tag=AC3ASX_02635;product=DUF3568 family protein;protein_id=MHV1764520.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 470307 470717 . - . ID=gene-AC3ASX_02640;Name=AC3ASX_02640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02640;pseudo=true JBYLIA010000001.1 Protein Homology CDS 470307 470717 . - 0 ID=cds-AC3ASX_02640;Parent=gene-AC3ASX_02640;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037879.1;locus_tag=AC3ASX_02640;product=DUF3568 domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 470737 471132 . - . ID=gene-AC3ASX_02645;Name=AC3ASX_02645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02645 JBYLIA010000001.1 Protein Homology CDS 470737 471132 . - 0 ID=cds-MHV1764521.1;Parent=gene-AC3ASX_02645;Dbxref=NCBI_GP:MHV1764521.1;Name=MHV1764521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022747.1;locus_tag=AC3ASX_02645;product=DUF3568 domain-containing protein;protein_id=MHV1764521.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 471336 471878 . + . ID=gene-AC3ASX_02650;Name=AC3ASX_02650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02650;pseudo=true JBYLIA010000001.1 Protein Homology CDS 471336 471878 . + 0 ID=cds-AC3ASX_02650;Parent=gene-AC3ASX_02650;Note=frameshifted%3B internal stop;Ontology_term=GO:0034258,GO:0034257,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nicotinamide riboside transmembrane transporter activity|0034257||IEA;go_process=nicotinamide riboside transport|0034258||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280291.1;locus_tag=AC3ASX_02650;product=nicotinamide mononucleotide transporter family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 471981 472199 . + . ID=gene-AC3ASX_02655;Name=AC3ASX_02655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02655 JBYLIA010000001.1 Protein Homology CDS 471981 472199 . + 0 ID=cds-MHV1764522.1;Parent=gene-AC3ASX_02655;Dbxref=NCBI_GP:MHV1764522.1;Name=MHV1764522.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: protein motif:HMM:NF013213.7;locus_tag=AC3ASX_02655;product=TatD family hydrolase;protein_id=MHV1764522.1;transl_table=11 JBYLIA010000001.1 Genbank gene 472396 472539 . + . ID=gene-AC3ASX_02660;Name=AC3ASX_02660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02660 JBYLIA010000001.1 GeneMarkS-2+ CDS 472396 472539 . + 0 ID=cds-MHV1764523.1;Parent=gene-AC3ASX_02660;Dbxref=NCBI_GP:MHV1764523.1;Name=MHV1764523.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02660;product=hypothetical protein;protein_id=MHV1764523.1;transl_table=11 JBYLIA010000001.1 Genbank gene 473012 473242 . + . ID=gene-AC3ASX_02665;Name=AC3ASX_02665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02665 JBYLIA010000001.1 Protein Homology CDS 473012 473242 . + 0 ID=cds-MHV1764524.1;Parent=gene-AC3ASX_02665;Dbxref=NCBI_GP:MHV1764524.1;Name=MHV1764524.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012770.7;locus_tag=AC3ASX_02665;product=hypothetical protein;protein_id=MHV1764524.1;transl_table=11 JBYLIA010000001.1 Genbank gene 473199 473396 . + . ID=gene-AC3ASX_02670;Name=AC3ASX_02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02670 JBYLIA010000001.1 GeneMarkS-2+ CDS 473199 473396 . + 0 ID=cds-MHV1764525.1;Parent=gene-AC3ASX_02670;Dbxref=NCBI_GP:MHV1764525.1;Name=MHV1764525.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02670;product=hypothetical protein;protein_id=MHV1764525.1;transl_table=11 JBYLIA010000001.1 Genbank gene 473481 473633 . + . ID=gene-AC3ASX_02675;Name=AC3ASX_02675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02675 JBYLIA010000001.1 GeneMarkS-2+ CDS 473481 473633 . + 0 ID=cds-MHV1764526.1;Parent=gene-AC3ASX_02675;Dbxref=NCBI_GP:MHV1764526.1;Name=MHV1764526.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02675;product=hypothetical protein;protein_id=MHV1764526.1;transl_table=11 JBYLIA010000001.1 Genbank gene 473946 475480 . + . ID=gene-AC3ASX_02680;Name=AC3ASX_02680;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC3ASX_02680 JBYLIA010000001.1 cmsearch rRNA 473946 475480 . + . ID=rna-AC3ASX_02680;Parent=gene-AC3ASX_02680;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_02680;product=16S ribosomal RNA JBYLIA010000001.1 cmsearch exon 473946 475480 . + . ID=exon-AC3ASX_02680-1;Parent=rna-AC3ASX_02680;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_02680;product=16S ribosomal RNA JBYLIA010000001.1 Genbank gene 475577 475653 . + . ID=gene-AC3ASX_02685;Name=AC3ASX_02685;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_02685 JBYLIA010000001.1 tRNAscan-SE tRNA 475577 475653 . + . ID=rna-AC3ASX_02685;Parent=gene-AC3ASX_02685;anticodon=(pos:475611..475613);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_02685;product=tRNA-Ile JBYLIA010000001.1 tRNAscan-SE exon 475577 475653 . + . ID=exon-AC3ASX_02685-1;Parent=rna-AC3ASX_02685;anticodon=(pos:475611..475613);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_02685;product=tRNA-Ile JBYLIA010000001.1 Genbank gene 475668 475743 . + . ID=gene-AC3ASX_02690;Name=AC3ASX_02690;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_02690 JBYLIA010000001.1 tRNAscan-SE tRNA 475668 475743 . + . ID=rna-AC3ASX_02690;Parent=gene-AC3ASX_02690;anticodon=(pos:475701..475703);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_02690;product=tRNA-Ala JBYLIA010000001.1 tRNAscan-SE exon 475668 475743 . + . ID=exon-AC3ASX_02690-1;Parent=rna-AC3ASX_02690;anticodon=(pos:475701..475703);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_02690;product=tRNA-Ala JBYLIA010000001.1 Genbank gene 475796 478684 . + . ID=gene-AC3ASX_02695;Name=AC3ASX_02695;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC3ASX_02695 JBYLIA010000001.1 cmsearch rRNA 475796 478684 . + . ID=rna-AC3ASX_02695;Parent=gene-AC3ASX_02695;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_02695;product=23S ribosomal RNA JBYLIA010000001.1 cmsearch exon 475796 478684 . + . ID=exon-AC3ASX_02695-1;Parent=rna-AC3ASX_02695;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_02695;product=23S ribosomal RNA JBYLIA010000001.1 Genbank gene 478732 478846 . + . ID=gene-AC3ASX_02700;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC3ASX_02700 JBYLIA010000001.1 cmsearch rRNA 478732 478846 . + . ID=rna-AC3ASX_02700;Parent=gene-AC3ASX_02700;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_02700;product=5S ribosomal RNA JBYLIA010000001.1 cmsearch exon 478732 478846 . + . ID=exon-AC3ASX_02700-1;Parent=rna-AC3ASX_02700;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_02700;product=5S ribosomal RNA JBYLIA010000001.1 Genbank gene 479785 479946 . + . ID=gene-AC3ASX_02705;Name=AC3ASX_02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02705 JBYLIA010000001.1 GeneMarkS-2+ CDS 479785 479946 . + 0 ID=cds-MHV1764527.1;Parent=gene-AC3ASX_02705;Dbxref=NCBI_GP:MHV1764527.1;Name=MHV1764527.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02705;product=cupin domain-containing protein;protein_id=MHV1764527.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 480373 481380 . - . ID=gene-AC3ASX_02710;Name=AC3ASX_02710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02710;pseudo=true JBYLIA010000001.1 Protein Homology CDS 480373 481380 . - 0 ID=cds-AC3ASX_02710;Parent=gene-AC3ASX_02710;Note=frameshifted%3B internal stop;Ontology_term=GO:0004888,GO:0022834;gbkey=CDS;go_function=transmembrane signaling receptor activity|0004888||IEA,ligand-gated channel activity|0022834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022099.1;locus_tag=AC3ASX_02710;product=ligand-gated ion channel;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 481501 482159 . - . ID=gene-AC3ASX_02715;Name=AC3ASX_02715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02715;pseudo=true JBYLIA010000001.1 Protein Homology CDS 481501 482159 . - 0 ID=cds-AC3ASX_02715;Parent=gene-AC3ASX_02715;Note=frameshifted;Ontology_term=GO:0006508,GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549423.1;locus_tag=AC3ASX_02715;product=site-2 protease family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 482973 483308 . + . ID=gene-AC3ASX_02720;Name=fevR;gbkey=Gene;gene=fevR;gene_biotype=protein_coding;gene_synonym=pigR;locus_tag=AC3ASX_02720 JBYLIA010000001.1 Protein Homology CDS 482973 483308 . + 0 ID=cds-MHV1764528.1;Parent=gene-AC3ASX_02720;Dbxref=NCBI_GP:MHV1764528.1;Name=MHV1764528.1;gbkey=CDS;gene=fevR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020066.1;locus_tag=AC3ASX_02720;product=transcriptional regulator FevR;protein_id=MHV1764528.1;transl_table=11 JBYLIA010000001.1 Genbank gene 483281 484132 . - . ID=gene-AC3ASX_02725;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=AC3ASX_02725 JBYLIA010000001.1 Protein Homology CDS 483281 484132 . - 0 ID=cds-MHV1764529.1;Parent=gene-AC3ASX_02725;Dbxref=NCBI_GP:MHV1764529.1;Name=MHV1764529.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549425.1;locus_tag=AC3ASX_02725;product=archaetidylserine decarboxylase;protein_id=MHV1764529.1;transl_table=11 JBYLIA010000001.1 Genbank gene 484236 485192 . + . ID=gene-AC3ASX_02730;Name=AC3ASX_02730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02730 JBYLIA010000001.1 Protein Homology CDS 484236 485192 . + 0 ID=cds-MHV1764530.1;Parent=gene-AC3ASX_02730;Dbxref=NCBI_GP:MHV1764530.1;Name=MHV1764530.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011242234.1;locus_tag=AC3ASX_02730;product=hypothetical protein;protein_id=MHV1764530.1;transl_table=11 JBYLIA010000001.1 Genbank gene 485228 486271 . + . ID=gene-AC3ASX_02735;Name=AC3ASX_02735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02735 JBYLIA010000001.1 Protein Homology CDS 485228 486271 . + 0 ID=cds-MHV1764531.1;Parent=gene-AC3ASX_02735;Dbxref=NCBI_GP:MHV1764531.1;Name=MHV1764531.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547755.1;locus_tag=AC3ASX_02735;product=bifunctional nicotinamide-nucleotide adenylyltransferase/Nudix hydroxylase;protein_id=MHV1764531.1;transl_table=11 JBYLIA010000001.1 Genbank gene 486285 487652 . + . ID=gene-AC3ASX_02740;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=AC3ASX_02740 JBYLIA010000001.1 Protein Homology CDS 486285 487652 . + 0 ID=cds-MHV1764532.1;Parent=gene-AC3ASX_02740;Dbxref=NCBI_GP:MHV1764532.1;Name=MHV1764532.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134,GO:0005737;gbkey=CDS;gene=glmU;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547756.1;locus_tag=AC3ASX_02740;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=MHV1764532.1;transl_table=11 JBYLIA010000001.1 Genbank gene 487672 489510 . + . ID=gene-AC3ASX_02745;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=AC3ASX_02745 JBYLIA010000001.1 Protein Homology CDS 487672 489510 . + 0 ID=cds-MHV1764533.1;Parent=gene-AC3ASX_02745;Dbxref=NCBI_GP:MHV1764533.1;Name=MHV1764533.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=L-glutamine:D-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020072.1;locus_tag=AC3ASX_02745;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=MHV1764533.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 489604 489955 . + . ID=gene-AC3ASX_02750;Name=AC3ASX_02750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02750;pseudo=true JBYLIA010000001.1 Protein Homology CDS 489604 489955 . + 0 ID=cds-AC3ASX_02750;Parent=gene-AC3ASX_02750;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011457382.1;locus_tag=AC3ASX_02750;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 489972 490169 . - . ID=gene-AC3ASX_02755;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=AC3ASX_02755 JBYLIA010000001.1 Protein Homology CDS 489972 490169 . - 0 ID=cds-MHV1764534.1;Parent=gene-AC3ASX_02755;Dbxref=NCBI_GP:MHV1764534.1;Name=MHV1764534.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004336856.1;locus_tag=AC3ASX_02755;product=30S ribosomal protein S21;protein_id=MHV1764534.1;transl_table=11 JBYLIA010000001.1 Genbank gene 490169 490372 . - . ID=gene-AC3ASX_02760;Name=AC3ASX_02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02760 JBYLIA010000001.1 Protein Homology CDS 490169 490372 . - 0 ID=cds-MHV1764535.1;Parent=gene-AC3ASX_02760;Dbxref=NCBI_GP:MHV1764535.1;Name=MHV1764535.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017957.1;locus_tag=AC3ASX_02760;product=cold-shock protein;protein_id=MHV1764535.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 490692 490975 . - . ID=gene-AC3ASX_02765;Name=AC3ASX_02765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02765;pseudo=true JBYLIA010000001.1 Protein Homology CDS 490692 490975 . - 0 ID=cds-AC3ASX_02765;Parent=gene-AC3ASX_02765;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017959.1;locus_tag=AC3ASX_02765;product=MazG nucleotide pyrophosphohydrolase domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 491100 491870 . + . ID=gene-AC3ASX_02770;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=AC3ASX_02770 JBYLIA010000001.1 Protein Homology CDS 491100 491870 . + 0 ID=cds-MHV1764536.1;Parent=gene-AC3ASX_02770;Dbxref=NCBI_GP:MHV1764536.1;Name=MHV1764536.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004336859.1;locus_tag=AC3ASX_02770;product=type I methionyl aminopeptidase;protein_id=MHV1764536.1;transl_table=11 JBYLIA010000001.1 Genbank gene 491872 492720 . + . ID=gene-AC3ASX_02775;Name=AC3ASX_02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02775 JBYLIA010000001.1 Protein Homology CDS 491872 492720 . + 0 ID=cds-MHV1764537.1;Parent=gene-AC3ASX_02775;Dbxref=NCBI_GP:MHV1764537.1;Name=MHV1764537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003041780.1;locus_tag=AC3ASX_02775;product=hypothetical protein;protein_id=MHV1764537.1;transl_table=11 JBYLIA010000001.1 Genbank gene 492821 495049 . + . ID=gene-AC3ASX_02780;Name=parC;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=AC3ASX_02780 JBYLIA010000001.1 Protein Homology CDS 492821 495049 . + 0 ID=cds-MHV1764538.1;Parent=gene-AC3ASX_02780;Dbxref=NCBI_GP:MHV1764538.1;Name=MHV1764538.1;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038505.1;locus_tag=AC3ASX_02780;product=DNA topoisomerase IV subunit A;protein_id=MHV1764538.1;transl_table=11 JBYLIA010000001.1 Genbank gene 495046 495732 . + . ID=gene-AC3ASX_02785;Name=AC3ASX_02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02785 JBYLIA010000001.1 Protein Homology CDS 495046 495732 . + 0 ID=cds-MHV1764539.1;Parent=gene-AC3ASX_02785;Dbxref=NCBI_GP:MHV1764539.1;Name=MHV1764539.1;Ontology_term=GO:0009116,GO:0009164,GO:0033353,GO:0008782,GO:0008930;gbkey=CDS;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside metabolic process|0009116||IEA,nucleoside catabolic process|0009164||IEA,L-methionine cycle|0033353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020090.1;locus_tag=AC3ASX_02785;product=5'-methylthioadenosine/adenosylhomocysteine nucleosidase;protein_id=MHV1764539.1;transl_table=11 JBYLIA010000001.1 Genbank gene 495719 496321 . - . ID=gene-AC3ASX_02790;Name=AC3ASX_02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02790 JBYLIA010000001.1 Protein Homology CDS 495719 496321 . - 0 ID=cds-MHV1764540.1;Parent=gene-AC3ASX_02790;Dbxref=NCBI_GP:MHV1764540.1;Name=MHV1764540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038507.1;locus_tag=AC3ASX_02790;product=hypothetical protein;protein_id=MHV1764540.1;transl_table=11 JBYLIA010000001.1 Genbank gene 496314 497432 . - . ID=gene-AC3ASX_02795;Name=AC3ASX_02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02795 JBYLIA010000001.1 Protein Homology CDS 496314 497432 . - 0 ID=cds-MHV1764541.1;Parent=gene-AC3ASX_02795;Dbxref=NCBI_GP:MHV1764541.1;Name=MHV1764541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035682.1;locus_tag=AC3ASX_02795;product=exo-alpha-sialidase;protein_id=MHV1764541.1;transl_table=11 JBYLIA010000001.1 Genbank gene 497645 499621 . + . ID=gene-AC3ASX_02800;Name=AC3ASX_02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02800 JBYLIA010000001.1 Protein Homology CDS 497645 499621 . + 0 ID=cds-MHV1764542.1;Parent=gene-AC3ASX_02800;Dbxref=NCBI_GP:MHV1764542.1;Name=MHV1764542.1;Ontology_term=GO:0000270,GO:0071555,GO:0008933;gbkey=CDS;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033216.1;locus_tag=AC3ASX_02800;product=lytic transglycosylase domain-containing protein;protein_id=MHV1764542.1;transl_table=11 JBYLIA010000001.1 Genbank gene 499720 500022 . + . ID=gene-AC3ASX_02805;Name=AC3ASX_02805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02805 JBYLIA010000001.1 GeneMarkS-2+ CDS 499720 500022 . + 0 ID=cds-MHV1764543.1;Parent=gene-AC3ASX_02805;Dbxref=NCBI_GP:MHV1764543.1;Name=MHV1764543.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02805;product=hypothetical protein;protein_id=MHV1764543.1;transl_table=11 JBYLIA010000001.1 Genbank gene 500468 503944 . + . ID=gene-AC3ASX_02810;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=AC3ASX_02810 JBYLIA010000001.1 Protein Homology CDS 500468 503944 . + 0 ID=cds-MHV1764544.1;Parent=gene-AC3ASX_02810;Dbxref=NCBI_GP:MHV1764544.1;Name=MHV1764544.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014367912.1;locus_tag=AC3ASX_02810;product=DNA polymerase III subunit alpha;protein_id=MHV1764544.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 504386 504679 . + . ID=gene-AC3ASX_02815;Name=AC3ASX_02815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02815;pseudo=true JBYLIA010000001.1 Protein Homology CDS 504386 504679 . + 0 ID=cds-AC3ASX_02815;Parent=gene-AC3ASX_02815;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013923588.1;locus_tag=AC3ASX_02815;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 504745 504859 . + . ID=gene-AC3ASX_02820;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC3ASX_02820 JBYLIA010000001.1 cmsearch rRNA 504745 504859 . + . ID=rna-AC3ASX_02820;Parent=gene-AC3ASX_02820;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_02820;product=5S ribosomal RNA JBYLIA010000001.1 cmsearch exon 504745 504859 . + . ID=exon-AC3ASX_02820-1;Parent=rna-AC3ASX_02820;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_02820;product=5S ribosomal RNA JBYLIA010000001.1 Genbank gene 505399 506661 . + . ID=gene-AC3ASX_02825;Name=AC3ASX_02825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02825 JBYLIA010000001.1 Protein Homology CDS 505399 506661 . + 0 ID=cds-MHV1764545.1;Parent=gene-AC3ASX_02825;Dbxref=NCBI_GP:MHV1764545.1;Name=MHV1764545.1;Ontology_term=GO:0042953,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429308.1;locus_tag=AC3ASX_02825;product=lipoprotein-releasing ABC transporter permease subunit;protein_id=MHV1764545.1;transl_table=11 JBYLIA010000001.1 Genbank gene 506654 507349 . + . ID=gene-AC3ASX_02830;Name=AC3ASX_02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02830 JBYLIA010000001.1 Protein Homology CDS 506654 507349 . + 0 ID=cds-MHV1764546.1;Parent=gene-AC3ASX_02830;Dbxref=NCBI_GP:MHV1764546.1;Name=MHV1764546.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011648600.1;locus_tag=AC3ASX_02830;product=ABC transporter ATP-binding protein;protein_id=MHV1764546.1;transl_table=11 JBYLIA010000001.1 Genbank gene 507599 507781 . + . ID=gene-AC3ASX_02835;Name=AC3ASX_02835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02835 JBYLIA010000001.1 GeneMarkS-2+ CDS 507599 507781 . + 0 ID=cds-MHV1764547.1;Parent=gene-AC3ASX_02835;Dbxref=NCBI_GP:MHV1764547.1;Name=MHV1764547.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02835;product=hypothetical protein;protein_id=MHV1764547.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 507942 508322 . + . ID=gene-AC3ASX_02840;Name=AC3ASX_02840;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02840;pseudo=true JBYLIA010000001.1 Protein Homology CDS 507942 508322 . + 0 ID=cds-AC3ASX_02840;Parent=gene-AC3ASX_02840;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013444.7;locus_tag=AC3ASX_02840;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 508387 508578 . + . ID=gene-AC3ASX_02845;Name=AC3ASX_02845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02845 JBYLIA010000001.1 Protein Homology CDS 508387 508578 . + 0 ID=cds-MHV1764548.1;Parent=gene-AC3ASX_02845;Dbxref=NCBI_GP:MHV1764548.1;Name=MHV1764548.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013444.7;locus_tag=AC3ASX_02845;product=hypothetical protein;protein_id=MHV1764548.1;transl_table=11 JBYLIA010000001.1 Genbank gene 508635 508802 . + . ID=gene-AC3ASX_02850;Name=AC3ASX_02850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02850 JBYLIA010000001.1 Protein Homology CDS 508635 508802 . + 0 ID=cds-MHV1764549.1;Parent=gene-AC3ASX_02850;Dbxref=NCBI_GP:MHV1764549.1;Name=MHV1764549.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013444.7;locus_tag=AC3ASX_02850;product=hypothetical protein;protein_id=MHV1764549.1;transl_table=11 JBYLIA010000001.1 Genbank gene 508981 509160 . + . ID=gene-AC3ASX_02855;Name=AC3ASX_02855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02855 JBYLIA010000001.1 GeneMarkS-2+ CDS 508981 509160 . + 0 ID=cds-MHV1764550.1;Parent=gene-AC3ASX_02855;Dbxref=NCBI_GP:MHV1764550.1;Name=MHV1764550.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02855;product=hypothetical protein;protein_id=MHV1764550.1;transl_table=11 JBYLIA010000001.1 Genbank gene 509359 509466 . + . ID=gene-AC3ASX_02860;Name=AC3ASX_02860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02860 JBYLIA010000001.1 Protein Homology CDS 509359 509466 . + 0 ID=cds-MHV1764551.1;Parent=gene-AC3ASX_02860;Dbxref=NCBI_GP:MHV1764551.1;Name=MHV1764551.1;Ontology_term=GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: protein motif:HMM:NF015656.8;locus_tag=AC3ASX_02860;product=Orn/Lys/Arg family decarboxylase;protein_id=MHV1764551.1;transl_table=11 JBYLIA010000001.1 Genbank gene 509652 510728 . + . ID=gene-AC3ASX_02865;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=AC3ASX_02865 JBYLIA010000001.1 Protein Homology CDS 509652 510728 . + 0 ID=cds-MHV1764552.1;Parent=gene-AC3ASX_02865;Dbxref=NCBI_GP:MHV1764552.1;Name=MHV1764552.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035694.1;locus_tag=AC3ASX_02865;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=MHV1764552.1;transl_table=11 JBYLIA010000001.1 Genbank gene 510782 511165 . + . ID=gene-AC3ASX_02870;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=AC3ASX_02870 JBYLIA010000001.1 Protein Homology CDS 510782 511165 . + 0 ID=cds-MHV1764553.1;Parent=gene-AC3ASX_02870;Dbxref=NCBI_GP:MHV1764553.1;Name=MHV1764553.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018004.1;locus_tag=AC3ASX_02870;product=glycine cleavage system protein GcvH;protein_id=MHV1764553.1;transl_table=11 JBYLIA010000001.1 Genbank gene 511232 512599 . + . ID=gene-AC3ASX_02875;Name=gcvPA;gbkey=Gene;gene=gcvPA;gene_biotype=protein_coding;locus_tag=AC3ASX_02875 JBYLIA010000001.1 Protein Homology CDS 511232 512599 . + 0 ID=cds-MHV1764554.1;Parent=gene-AC3ASX_02875;Dbxref=NCBI_GP:MHV1764554.1;Name=MHV1764554.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPA;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038515.1;locus_tag=AC3ASX_02875;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPA;protein_id=MHV1764554.1;transl_table=11 JBYLIA010000001.1 Genbank gene 512602 514047 . + . ID=gene-AC3ASX_02880;Name=gcvPB;gbkey=Gene;gene=gcvPB;gene_biotype=protein_coding;locus_tag=AC3ASX_02880 JBYLIA010000001.1 Protein Homology CDS 512602 514047 . + 0 ID=cds-MHV1764555.1;Parent=gene-AC3ASX_02880;Dbxref=NCBI_GP:MHV1764555.1;Name=MHV1764555.1;Ontology_term=GO:0006546,GO:0004375;gbkey=CDS;gene=gcvPB;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine catabolic process|0006546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011242235.1;locus_tag=AC3ASX_02880;product=aminomethyl-transferring glycine dehydrogenase subunit GcvPB;protein_id=MHV1764555.1;transl_table=11 JBYLIA010000001.1 Genbank gene 514675 515109 . + . ID=gene-AC3ASX_02885;Name=AC3ASX_02885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02885 JBYLIA010000001.1 Protein Homology CDS 514675 515109 . + 0 ID=cds-MHV1764556.1;Parent=gene-AC3ASX_02885;Dbxref=NCBI_GP:MHV1764556.1;Name=MHV1764556.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: protein motif:HMM:NF012863.7;locus_tag=AC3ASX_02885;product=SGNH/GDSL hydrolase family protein;protein_id=MHV1764556.1;transl_table=11 JBYLIA010000001.1 Genbank gene 515360 515524 . + . ID=gene-AC3ASX_02890;Name=AC3ASX_02890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02890 JBYLIA010000001.1 GeneMarkS-2+ CDS 515360 515524 . + 0 ID=cds-MHV1764557.1;Parent=gene-AC3ASX_02890;Dbxref=NCBI_GP:MHV1764557.1;Name=MHV1764557.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02890;product=hypothetical protein;protein_id=MHV1764557.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 515536 516317 . - . ID=gene-AC3ASX_02895;Name=AC3ASX_02895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02895;pseudo=true JBYLIA010000001.1 Protein Homology CDS 515536 516317 . - 0 ID=cds-AC3ASX_02895;Parent=gene-AC3ASX_02895;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020141.1;locus_tag=AC3ASX_02895;product=shikimate dehydrogenase family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 516345 518704 . - . ID=gene-AC3ASX_02900;Name=AC3ASX_02900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02900;pseudo=true JBYLIA010000001.1 Protein Homology CDS 516345 518704 . - 0 ID=cds-AC3ASX_02900;Parent=gene-AC3ASX_02900;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005975,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547787.1;locus_tag=AC3ASX_02900;product=alpha-amylase family glycosyl hydrolase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 518976 520788 . - . ID=gene-AC3ASX_02905;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=pseudogene;locus_tag=AC3ASX_02905;pseudo=true JBYLIA010000001.1 Protein Homology CDS 518976 520788 . - 0 ID=cds-AC3ASX_02905;Parent=gene-AC3ASX_02905;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005975,GO:0005978,GO:0003844,GO:0004553,GO:0043169;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038522.1;locus_tag=AC3ASX_02905;product=1%2C4-alpha-glucan branching protein GlgB;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 521068 522702 . + . ID=gene-AC3ASX_02910;Name=AC3ASX_02910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02910 JBYLIA010000001.1 Protein Homology CDS 521068 522702 . + 0 ID=cds-MHV1764558.1;Parent=gene-AC3ASX_02910;Dbxref=NCBI_GP:MHV1764558.1;Name=MHV1764558.1;Ontology_term=GO:0005975,GO:0016868;gbkey=CDS;go_function=intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012279826.1;locus_tag=AC3ASX_02910;product=alpha-D-glucose phosphate-specific phosphoglucomutase;protein_id=MHV1764558.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 522872 523255 . + . ID=gene-AC3ASX_02915;Name=AC3ASX_02915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02915;pseudo=true JBYLIA010000001.1 Protein Homology CDS 522872 523255 . + 0 ID=cds-AC3ASX_02915;Parent=gene-AC3ASX_02915;Note=internal stop;Ontology_term=GO:0009058,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF012695.7;locus_tag=AC3ASX_02915;product=sugar phosphate nucleotidyltransferase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 523291 523392 . + . ID=gene-AC3ASX_02920;Name=AC3ASX_02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02920 JBYLIA010000001.1 Protein Homology CDS 523291 523392 . + 0 ID=cds-MHV1764559.1;Parent=gene-AC3ASX_02920;Dbxref=NCBI_GP:MHV1764559.1;Name=MHV1764559.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012695.7;locus_tag=AC3ASX_02920;product=hypothetical protein;protein_id=MHV1764559.1;transl_table=11 JBYLIA010000001.1 Genbank gene 523394 523864 . + . ID=gene-AC3ASX_02925;Name=AC3ASX_02925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02925 JBYLIA010000001.1 Protein Homology CDS 523394 523864 . + 0 ID=cds-MHV1764560.1;Parent=gene-AC3ASX_02925;Dbxref=NCBI_GP:MHV1764560.1;Name=MHV1764560.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: protein motif:HMM:NF051390.2;locus_tag=AC3ASX_02925;product=GlgC family sugar phosphate nucleotidyltransferase;protein_id=MHV1764560.1;transl_table=11 JBYLIA010000001.1 Genbank gene 523875 523997 . + . ID=gene-AC3ASX_02930;Name=AC3ASX_02930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02930 JBYLIA010000001.1 Protein Homology CDS 523875 523997 . + 0 ID=cds-MHV1764561.1;Parent=gene-AC3ASX_02930;Dbxref=NCBI_GP:MHV1764561.1;Name=MHV1764561.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: protein motif:HMM:NF051390.2;locus_tag=AC3ASX_02930;product=GlgC family sugar phosphate nucleotidyltransferase;protein_id=MHV1764561.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 524017 525473 . + . ID=gene-AC3ASX_02935;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=pseudogene;locus_tag=AC3ASX_02935;pseudo=true JBYLIA010000001.1 Protein Homology CDS 524017 525473 . + 0 ID=cds-AC3ASX_02935;Parent=gene-AC3ASX_02935;Note=frameshifted%3B internal stop;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035705.1;locus_tag=AC3ASX_02935;product=glycogen synthase GlgA;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 525578 525718 . + . ID=gene-AC3ASX_02940;Name=AC3ASX_02940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02940 JBYLIA010000001.1 GeneMarkS-2+ CDS 525578 525718 . + 0 ID=cds-MHV1764562.1;Parent=gene-AC3ASX_02940;Dbxref=NCBI_GP:MHV1764562.1;Name=MHV1764562.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_02940;product=hypothetical protein;protein_id=MHV1764562.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 525865 526340 . + . ID=gene-AC3ASX_02945;Name=AC3ASX_02945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02945;pseudo=true JBYLIA010000001.1 Protein Homology CDS 525865 526340 . + 0 ID=cds-AC3ASX_02945;Parent=gene-AC3ASX_02945;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005975,GO:0008184;gbkey=CDS;go_function=glycogen phosphorylase activity|0008184||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429316.1;locus_tag=AC3ASX_02945;product=glycogen/starch/alpha-glucan phosphorylase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 526390 527770 . + . ID=gene-AC3ASX_02950;Name=malQ;gbkey=Gene;gene=malQ;gene_biotype=pseudogene;locus_tag=AC3ASX_02950;pseudo=true JBYLIA010000001.1 Protein Homology CDS 526390 527770 . + 0 ID=cds-AC3ASX_02950;Parent=gene-AC3ASX_02950;Note=frameshifted%3B internal stop;Ontology_term=GO:0005980,GO:0004134;gbkey=CDS;gene=malQ;go_function=4-alpha-glucanotransferase activity|0004134||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033240.1;locus_tag=AC3ASX_02950;product=4-alpha-glucanotransferase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 527860 528744 . + . ID=gene-AC3ASX_02955;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=AC3ASX_02955 JBYLIA010000001.1 Protein Homology CDS 527860 528744 . + 0 ID=cds-MHV1764563.1;Parent=gene-AC3ASX_02955;Dbxref=NCBI_GP:MHV1764563.1;Name=MHV1764563.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013923567.1;locus_tag=AC3ASX_02955;product=glycine--tRNA ligase subunit alpha;protein_id=MHV1764563.1;transl_table=11 JBYLIA010000001.1 Genbank gene 528951 530492 . + . ID=gene-AC3ASX_02960;Name=AC3ASX_02960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02960 JBYLIA010000001.1 Protein Homology CDS 528951 530492 . + 0 ID=cds-MHV1764564.1;Parent=gene-AC3ASX_02960;Dbxref=NCBI_GP:MHV1764564.1;Name=MHV1764564.1;Ontology_term=GO:0009252,GO:0000287,GO:0005524,GO:0008765;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanyl-D-glutamate-2%2C6-diaminopimelate ligase activity|0008765||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003023189.1;locus_tag=AC3ASX_02960;product=Mur ligase family protein;protein_id=MHV1764564.1;transl_table=11 JBYLIA010000001.1 Genbank gene 530511 531869 . + . ID=gene-AC3ASX_02965;Name=AC3ASX_02965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02965 JBYLIA010000001.1 Protein Homology CDS 530511 531869 . + 0 ID=cds-MHV1764565.1;Parent=gene-AC3ASX_02965;Dbxref=NCBI_GP:MHV1764565.1;Name=MHV1764565.1;Ontology_term=GO:0009252,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547797.1;locus_tag=AC3ASX_02965;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=MHV1764565.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 531889 532996 . - . ID=gene-AC3ASX_02970;Name=AC3ASX_02970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02970;pseudo=true JBYLIA010000001.1 Protein Homology CDS 531889 532996 . - 0 ID=cds-AC3ASX_02970;Parent=gene-AC3ASX_02970;Note=frameshifted;Ontology_term=GO:0004073,GO:0030554;gbkey=CDS;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018044.1;locus_tag=AC3ASX_02970;product=aspartate-semialdehyde dehydrogenase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 533146 533932 . + . ID=gene-AC3ASX_02975;Name=AC3ASX_02975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_02975;pseudo=true JBYLIA010000001.1 Protein Homology CDS 533146 533932 . + 0 ID=cds-AC3ASX_02975;Parent=gene-AC3ASX_02975;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0006566,GO:0004413,GO:0005524;gbkey=CDS;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=L-threonine metabolic process|0006566||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429322.1;locus_tag=AC3ASX_02975;product=homoserine kinase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 533991 535264 . + . ID=gene-AC3ASX_02980;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=pseudogene;locus_tag=AC3ASX_02980;pseudo=true JBYLIA010000001.1 Protein Homology CDS 533991 535264 . + 0 ID=cds-AC3ASX_02980;Parent=gene-AC3ASX_02980;Note=frameshifted%3B internal stop;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=L-threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547801.1;locus_tag=AC3ASX_02980;product=threonine synthase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 535277 535993 . - . ID=gene-AC3ASX_02985;Name=AC3ASX_02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_02985 JBYLIA010000001.1 Protein Homology CDS 535277 535993 . - 0 ID=cds-MHV1764566.1;Parent=gene-AC3ASX_02985;Dbxref=NCBI_GP:MHV1764566.1;Name=MHV1764566.1;Ontology_term=GO:0009245,GO:0016462;gbkey=CDS;go_function=pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035738.1;locus_tag=AC3ASX_02985;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=MHV1764566.1;transl_table=11 JBYLIA010000001.1 Genbank gene 535983 536609 . - . ID=gene-AC3ASX_02990;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=AC3ASX_02990 JBYLIA010000001.1 Protein Homology CDS 535983 536609 . - 0 ID=cds-MHV1764567.1;Parent=gene-AC3ASX_02990;Dbxref=NCBI_GP:MHV1764567.1;Name=MHV1764567.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014715071.1;locus_tag=AC3ASX_02990;product=orotate phosphoribosyltransferase;protein_id=MHV1764567.1;transl_table=11 JBYLIA010000001.1 Genbank gene 536768 538138 . + . ID=gene-AC3ASX_02995;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=AC3ASX_02995 JBYLIA010000001.1 Protein Homology CDS 536768 538138 . + 0 ID=cds-MHV1764568.1;Parent=gene-AC3ASX_02995;Dbxref=NCBI_GP:MHV1764568.1;Name=MHV1764568.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004288208.1;locus_tag=AC3ASX_02995;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=MHV1764568.1;transl_table=11 JBYLIA010000001.1 Genbank gene 538135 538881 . + . ID=gene-AC3ASX_03000;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=AC3ASX_03000 JBYLIA010000001.1 Protein Homology CDS 538135 538881 . + 0 ID=cds-MHV1764569.1;Parent=gene-AC3ASX_03000;Dbxref=NCBI_GP:MHV1764569.1;Name=MHV1764569.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033285.1;locus_tag=AC3ASX_03000;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=MHV1764569.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 538897 539540 . - . ID=gene-AC3ASX_03005;Name=AC3ASX_03005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03005;pseudo=true JBYLIA010000001.1 Protein Homology CDS 538897 539540 . - 0 ID=cds-AC3ASX_03005;Parent=gene-AC3ASX_03005;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033287.1;locus_tag=AC3ASX_03005;product=DUF1275 family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 539542 540172 . - . ID=gene-AC3ASX_03010;Name=AC3ASX_03010;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03010;pseudo=true JBYLIA010000001.1 Protein Homology CDS 539542 540172 . - 0 ID=cds-AC3ASX_03010;Parent=gene-AC3ASX_03010;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012279805.1;locus_tag=AC3ASX_03010;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 540340 541566 . + . ID=gene-AC3ASX_03015;Name=AC3ASX_03015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03015 JBYLIA010000001.1 Protein Homology CDS 540340 541566 . + 0 ID=cds-MHV1764570.1;Parent=gene-AC3ASX_03015;Dbxref=NCBI_GP:MHV1764570.1;Name=MHV1764570.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429789.1;locus_tag=AC3ASX_03015;product=MFS transporter;protein_id=MHV1764570.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 541600 543442 . + . ID=gene-AC3ASX_03020;Name=AC3ASX_03020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03020;pseudo=true JBYLIA010000001.1 Protein Homology CDS 541600 543442 . + 0 ID=cds-AC3ASX_03020;Parent=gene-AC3ASX_03020;Note=frameshifted%3B internal stop;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026964.1;locus_tag=AC3ASX_03020;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 543511 544938 . + . ID=gene-AC3ASX_03025;Name=AC3ASX_03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03025 JBYLIA010000001.1 Protein Homology CDS 543511 544938 . + 0 ID=cds-MHV1764571.1;Parent=gene-AC3ASX_03025;Dbxref=NCBI_GP:MHV1764571.1;Name=MHV1764571.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020205.1;locus_tag=AC3ASX_03025;product=peptide MFS transporter;protein_id=MHV1764571.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 544996 546241 . - . ID=gene-AC3ASX_03030;Name=AC3ASX_03030;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03030;pseudo=true JBYLIA010000001.1 Protein Homology CDS 544996 546241 . - 0 ID=cds-AC3ASX_03030;Parent=gene-AC3ASX_03030;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549478.1;locus_tag=AC3ASX_03030;product=glycosyltransferase family 39 protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 546264 547910 . - . ID=gene-AC3ASX_03035;Name=AC3ASX_03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03035 JBYLIA010000001.1 Protein Homology CDS 546264 547910 . - 0 ID=cds-MHV1764572.1;Parent=gene-AC3ASX_03035;Dbxref=NCBI_GP:MHV1764572.1;Name=MHV1764572.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038572.1;locus_tag=AC3ASX_03035;product=glutamine--tRNA ligase/YqeY domain fusion protein;protein_id=MHV1764572.1;transl_table=11 JBYLIA010000001.1 Genbank gene 548060 549646 . + . ID=gene-AC3ASX_03040;Name=AC3ASX_03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03040 JBYLIA010000001.1 Protein Homology CDS 548060 549646 . + 0 ID=cds-MHV1764573.1;Parent=gene-AC3ASX_03040;Dbxref=NCBI_GP:MHV1764573.1;Name=MHV1764573.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003041866.1;locus_tag=AC3ASX_03040;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=MHV1764573.1;transl_table=11 JBYLIA010000001.1 Genbank gene 549722 550816 . + . ID=gene-AC3ASX_03045;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=AC3ASX_03045 JBYLIA010000001.1 Protein Homology CDS 549722 550816 . + 0 ID=cds-MHV1764574.1;Parent=gene-AC3ASX_03045;Dbxref=NCBI_GP:MHV1764574.1;Name=MHV1764574.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020217.1;locus_tag=AC3ASX_03045;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=MHV1764574.1;transl_table=11 JBYLIA010000001.1 Genbank gene 550816 552069 . + . ID=gene-AC3ASX_03050;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=AC3ASX_03050 JBYLIA010000001.1 Protein Homology CDS 550816 552069 . + 0 ID=cds-MHV1764575.1;Parent=gene-AC3ASX_03050;Dbxref=NCBI_GP:MHV1764575.1;Name=MHV1764575.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019464.1;locus_tag=AC3ASX_03050;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=MHV1764575.1;transl_table=11 JBYLIA010000001.1 Genbank gene 552079 553284 . + . ID=gene-AC3ASX_03055;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=AC3ASX_03055 JBYLIA010000001.1 Protein Homology CDS 552079 553284 . + 0 ID=cds-MHV1764576.1;Parent=gene-AC3ASX_03055;Dbxref=NCBI_GP:MHV1764576.1;Name=MHV1764576.1;Ontology_term=GO:0009252,GO:0051301,GO:0016020;gbkey=CDS;gene=ftsW;go_component=membrane|0016020||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026951.1;locus_tag=AC3ASX_03055;product=putative lipid II flippase FtsW;protein_id=MHV1764576.1;transl_table=11 JBYLIA010000001.1 Genbank gene 553288 554097 . - . ID=gene-AC3ASX_03060;Name=naxD;gbkey=Gene;gene=naxD;gene_biotype=protein_coding;locus_tag=AC3ASX_03060 JBYLIA010000001.1 Protein Homology CDS 553288 554097 . - 0 ID=cds-MHV1764577.1;Parent=gene-AC3ASX_03060;Dbxref=NCBI_GP:MHV1764577.1;Name=MHV1764577.1;gbkey=CDS;gene=naxD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035771.1;locus_tag=AC3ASX_03060;product=N-acetylhexosamine deacetylase NaxD;protein_id=MHV1764577.1;transl_table=11 JBYLIA010000001.1 Genbank gene 554196 555152 . + . ID=gene-AC3ASX_03065;Name=AC3ASX_03065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03065 JBYLIA010000001.1 Protein Homology CDS 554196 555152 . + 0 ID=cds-MHV1764578.1;Parent=gene-AC3ASX_03065;Dbxref=NCBI_GP:MHV1764578.1;Name=MHV1764578.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016999.1;locus_tag=AC3ASX_03065;product=glycosyltransferase family 2 protein;protein_id=MHV1764578.1;transl_table=11 JBYLIA010000001.1 Genbank gene 555422 557185 . - . ID=gene-AC3ASX_03070;Name=AC3ASX_03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03070 JBYLIA010000001.1 Protein Homology CDS 555422 557185 . - 0 ID=cds-MHV1764579.1;Parent=gene-AC3ASX_03070;Dbxref=NCBI_GP:MHV1764579.1;Name=MHV1764579.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033309.1;locus_tag=AC3ASX_03070;product=ArnT family glycosyltransferase;protein_id=MHV1764579.1;transl_table=11 JBYLIA010000001.1 Genbank gene 557275 557538 . - . ID=gene-AC3ASX_03075;Name=AC3ASX_03075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03075 JBYLIA010000001.1 Protein Homology CDS 557275 557538 . - 0 ID=cds-MHV1764580.1;Parent=gene-AC3ASX_03075;Dbxref=NCBI_GP:MHV1764580.1;Name=MHV1764580.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429780.1;locus_tag=AC3ASX_03075;product=oxidative damage protection protein;protein_id=MHV1764580.1;transl_table=11 JBYLIA010000001.1 Genbank gene 557559 557873 . - . ID=gene-AC3ASX_03080;Name=AC3ASX_03080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03080 JBYLIA010000001.1 Protein Homology CDS 557559 557873 . - 0 ID=cds-MHV1764581.1;Parent=gene-AC3ASX_03080;Dbxref=NCBI_GP:MHV1764581.1;Name=MHV1764581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020235.1;locus_tag=AC3ASX_03080;product=TusE/DsrC/DsvC family sulfur relay protein;protein_id=MHV1764581.1;transl_table=11 JBYLIA010000001.1 Genbank gene 557959 558591 . + . ID=gene-AC3ASX_03085;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=AC3ASX_03085 JBYLIA010000001.1 Protein Homology CDS 557959 558591 . + 0 ID=cds-MHV1764582.1;Parent=gene-AC3ASX_03085;Dbxref=NCBI_GP:MHV1764582.1;Name=MHV1764582.1;gbkey=CDS;gene=sspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003028987.1;locus_tag=AC3ASX_03085;product=transcriptional regulator SspA;protein_id=MHV1764582.1;transl_table=11 JBYLIA010000001.1 Genbank gene 558603 559619 . + . ID=gene-AC3ASX_03090;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=AC3ASX_03090 JBYLIA010000001.1 Protein Homology CDS 558603 559619 . + 0 ID=cds-MHV1764583.1;Parent=gene-AC3ASX_03090;Dbxref=NCBI_GP:MHV1764583.1;Name=MHV1764583.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019454.1;locus_tag=AC3ASX_03090;product=protease SohB;protein_id=MHV1764583.1;transl_table=11 JBYLIA010000001.1 Genbank gene 559622 560533 . + . ID=gene-AC3ASX_03095;Name=AC3ASX_03095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03095 JBYLIA010000001.1 Protein Homology CDS 559622 560533 . + 0 ID=cds-MHV1764584.1;Parent=gene-AC3ASX_03095;Dbxref=NCBI_GP:MHV1764584.1;Name=MHV1764584.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020243.1;locus_tag=AC3ASX_03095;product=DNA polymerase III subunit delta' C-terminal domain-containing protein;protein_id=MHV1764584.1;transl_table=11 JBYLIA010000001.1 Genbank gene 560545 560823 . + . ID=gene-AC3ASX_03100;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=AC3ASX_03100 JBYLIA010000001.1 Protein Homology CDS 560545 560823 . + 0 ID=cds-MHV1764585.1;Parent=gene-AC3ASX_03100;Dbxref=NCBI_GP:MHV1764585.1;Name=MHV1764585.1;Ontology_term=GO:0003723;gbkey=CDS;gene=yhbY;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004288189.1;locus_tag=AC3ASX_03100;product=ribosome assembly RNA-binding protein YhbY;protein_id=MHV1764585.1;transl_table=11 JBYLIA010000001.1 Genbank gene 560831 561805 . + . ID=gene-AC3ASX_03105;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=AC3ASX_03105 JBYLIA010000001.1 Protein Homology CDS 560831 561805 . + 0 ID=cds-MHV1764586.1;Parent=gene-AC3ASX_03105;Dbxref=NCBI_GP:MHV1764586.1;Name=MHV1764586.1;Ontology_term=GO:0033014,GO:0003824,GO:0004655,GO:0046872;gbkey=CDS;gene=hemB;go_function=catalytic activity|0003824||IEA,porphobilinogen synthase activity|0004655||IEA,metal ion binding|0046872||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003041882.1;locus_tag=AC3ASX_03105;product=porphobilinogen synthase;protein_id=MHV1764586.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 561809 562278 . + . ID=gene-AC3ASX_03110;Name=AC3ASX_03110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03110;pseudo=true JBYLIA010000001.1 Protein Homology CDS 561809 562278 . + 0 ID=cds-AC3ASX_03110;Parent=gene-AC3ASX_03110;Note=frameshifted;Ontology_term=GO:0001510,GO:0003723,GO:0008173,GO:0141098,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,tRNA (cytidine(34)-2'-O-ribose)-methyltransferase activity|0141098||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429775.1;locus_tag=AC3ASX_03110;product=tRNA (cytidine(34)-2'-O)-methyltransferase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 562438 563428 . + . ID=gene-AC3ASX_03115;Name=AC3ASX_03115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03115;pseudo=true JBYLIA010000001.1 Protein Homology CDS 562438 563428 . + 0 ID=cds-AC3ASX_03115;Parent=gene-AC3ASX_03115;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020251.1;locus_tag=AC3ASX_03115;product=asparaginase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 563985 564146 . - . ID=gene-AC3ASX_03120;Name=AC3ASX_03120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03120 JBYLIA010000001.1 GeneMarkS-2+ CDS 563985 564146 . - 0 ID=cds-MHV1764587.1;Parent=gene-AC3ASX_03120;Dbxref=NCBI_GP:MHV1764587.1;Name=MHV1764587.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_03120;product=hypothetical protein;protein_id=MHV1764587.1;transl_table=11 JBYLIA010000001.1 Genbank gene 564336 564470 . - . ID=gene-AC3ASX_03125;Name=AC3ASX_03125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03125 JBYLIA010000001.1 Protein Homology CDS 564336 564470 . - 0 ID=cds-MHV1764588.1;Parent=gene-AC3ASX_03125;Dbxref=NCBI_GP:MHV1764588.1;Name=MHV1764588.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013050.7;locus_tag=AC3ASX_03125;product=POT-type proton-dependent oligopeptide transporter;protein_id=MHV1764588.1;transl_table=11 JBYLIA010000001.1 Genbank gene 564854 566599 . - . ID=gene-AC3ASX_03130;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=AC3ASX_03130 JBYLIA010000001.1 Protein Homology CDS 564854 566599 . - 0 ID=cds-MHV1764589.1;Parent=gene-AC3ASX_03130;Dbxref=NCBI_GP:MHV1764589.1;Name=MHV1764589.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033328.1;locus_tag=AC3ASX_03130;product=arginine--tRNA ligase;protein_id=MHV1764589.1;transl_table=11 JBYLIA010000001.1 Genbank gene 566728 569382 . + . ID=gene-AC3ASX_03135;Name=AC3ASX_03135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03135 JBYLIA010000001.1 Protein Homology CDS 566728 569382 . + 0 ID=cds-MHV1764590.1;Parent=gene-AC3ASX_03135;Dbxref=NCBI_GP:MHV1764590.1;Name=MHV1764590.1;Ontology_term=GO:0015920;gbkey=CDS;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549614.1;locus_tag=AC3ASX_03135;product=LPS-assembly protein LptD;protein_id=MHV1764590.1;transl_table=11 JBYLIA010000001.1 Genbank gene 569336 570736 . + . ID=gene-AC3ASX_03140;Name=AC3ASX_03140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03140 JBYLIA010000001.1 Protein Homology CDS 569336 570736 . + 0 ID=cds-MHV1764591.1;Parent=gene-AC3ASX_03140;Dbxref=NCBI_GP:MHV1764591.1;Name=MHV1764591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019446.1;locus_tag=AC3ASX_03140;product=SurA N-terminal domain-containing protein;protein_id=MHV1764591.1;transl_table=11 JBYLIA010000001.1 Genbank gene 570747 571535 . + . ID=gene-AC3ASX_03145;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=AC3ASX_03145 JBYLIA010000001.1 Protein Homology CDS 570747 571535 . + 0 ID=cds-MHV1764592.1;Parent=gene-AC3ASX_03145;Dbxref=NCBI_GP:MHV1764592.1;Name=MHV1764592.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020263.1;locus_tag=AC3ASX_03145;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=MHV1764592.1;transl_table=11 JBYLIA010000001.1 Genbank gene 571547 572374 . + . ID=gene-AC3ASX_03150;Name=AC3ASX_03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03150 JBYLIA010000001.1 Protein Homology CDS 571547 572374 . + 0 ID=cds-MHV1764593.1;Parent=gene-AC3ASX_03150;Dbxref=NCBI_GP:MHV1764593.1;Name=MHV1764593.1;Ontology_term=GO:0008803;gbkey=CDS;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547818.1;locus_tag=AC3ASX_03150;product=symmetrical bis(5'-nucleosyl)-tetraphosphatase;protein_id=MHV1764593.1;transl_table=11 JBYLIA010000001.1 Genbank gene 572379 572825 . + . ID=gene-AC3ASX_03155;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=AC3ASX_03155 JBYLIA010000001.1 Protein Homology CDS 572379 572825 . + 0 ID=cds-MHV1764594.1;Parent=gene-AC3ASX_03155;Dbxref=NCBI_GP:MHV1764594.1;Name=MHV1764594.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016972.1;locus_tag=AC3ASX_03155;product=type II 3-dehydroquinate dehydratase;protein_id=MHV1764594.1;transl_table=11 JBYLIA010000001.1 Genbank gene 572832 573311 . + . ID=gene-AC3ASX_03160;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=AC3ASX_03160 JBYLIA010000001.1 Protein Homology CDS 572832 573311 . + 0 ID=cds-MHV1764595.1;Parent=gene-AC3ASX_03160;Dbxref=NCBI_GP:MHV1764595.1;Name=MHV1764595.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020267.1;locus_tag=AC3ASX_03160;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=MHV1764595.1;transl_table=11 JBYLIA010000001.1 Genbank gene 573375 574733 . + . ID=gene-AC3ASX_03165;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=AC3ASX_03165 JBYLIA010000001.1 Protein Homology CDS 573375 574733 . + 0 ID=cds-MHV1764596.1;Parent=gene-AC3ASX_03165;Dbxref=NCBI_GP:MHV1764596.1;Name=MHV1764596.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549494.1;locus_tag=AC3ASX_03165;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=MHV1764596.1;transl_table=11 JBYLIA010000001.1 Genbank gene 574829 575461 . + . ID=gene-AC3ASX_03170;Name=AC3ASX_03170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03170 JBYLIA010000001.1 Protein Homology CDS 574829 575461 . + 0 ID=cds-MHV1764597.1;Parent=gene-AC3ASX_03170;Dbxref=NCBI_GP:MHV1764597.1;Name=MHV1764597.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012279779.1;locus_tag=AC3ASX_03170;product=helix-turn-helix domain-containing protein;protein_id=MHV1764597.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 575510 576625 . + . ID=gene-AC3ASX_03175;Name=AC3ASX_03175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03175;pseudo=true JBYLIA010000001.1 Protein Homology CDS 575510 576625 . + 0 ID=cds-AC3ASX_03175;Parent=gene-AC3ASX_03175;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033340.1;locus_tag=AC3ASX_03175;product=mechanosensitive ion channel domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 576898 577356 . - . ID=gene-AC3ASX_03180;Name=AC3ASX_03180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03180 JBYLIA010000001.1 Protein Homology CDS 576898 577356 . - 0 ID=cds-MHV1764598.1;Parent=gene-AC3ASX_03180;Dbxref=NCBI_GP:MHV1764598.1;Name=MHV1764598.1;Ontology_term=GO:0043039,GO:0000166,GO:0004812,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: protein motif:HMM:NF012379.7;locus_tag=AC3ASX_03180;product=amino acid--tRNA ligase-related protein;protein_id=MHV1764598.1;transl_table=11 JBYLIA010000001.1 Genbank gene 577395 577550 . - . ID=gene-AC3ASX_03185;Name=AC3ASX_03185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03185 JBYLIA010000001.1 GeneMarkS-2+ CDS 577395 577550 . - 0 ID=cds-MHV1764599.1;Parent=gene-AC3ASX_03185;Dbxref=NCBI_GP:MHV1764599.1;Name=MHV1764599.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_03185;product=hypothetical protein;protein_id=MHV1764599.1;transl_table=11 JBYLIA010000001.1 Genbank gene 577547 578329 . - . ID=gene-AC3ASX_03190;Name=AC3ASX_03190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03190 JBYLIA010000001.1 Protein Homology CDS 577547 578329 . - 0 ID=cds-MHV1764600.1;Parent=gene-AC3ASX_03190;Dbxref=NCBI_GP:MHV1764600.1;Name=MHV1764600.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038601.1;locus_tag=AC3ASX_03190;product=biotin--[acetyl-CoA-carboxylase] ligase;protein_id=MHV1764600.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 578342 579775 . - . ID=gene-AC3ASX_03195;Name=AC3ASX_03195;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03195;pseudo=true JBYLIA010000001.1 Protein Homology CDS 578342 579775 . - 0 ID=cds-AC3ASX_03195;Parent=gene-AC3ASX_03195;Note=frameshifted%3B internal stop;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0008409,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,5'-3' exonuclease activity|0008409||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003028358.1;locus_tag=AC3ASX_03195;product=single-stranded-DNA-specific exonuclease RecJ;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 580040 581145 . - . ID=gene-AC3ASX_03200;Name=AC3ASX_03200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03200;pseudo=true JBYLIA010000001.1 Protein Homology CDS 580040 581145 . - 0 ID=cds-AC3ASX_03200;Parent=gene-AC3ASX_03200;Note=frameshifted;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016952.1;locus_tag=AC3ASX_03200;product=AI-2E family transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 581222 582658 . - . ID=gene-AC3ASX_03205;Name=gadC;gbkey=Gene;gene=gadC;gene_biotype=protein_coding;locus_tag=AC3ASX_03205 JBYLIA010000001.1 Protein Homology CDS 581222 582658 . - 0 ID=cds-MHV1764601.1;Parent=gene-AC3ASX_03205;Dbxref=NCBI_GP:MHV1764601.1;Name=MHV1764601.1;gbkey=CDS;gene=gadC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020284.1;locus_tag=AC3ASX_03205;product=glutamate transporter GadC;protein_id=MHV1764601.1;transl_table=11 JBYLIA010000001.1 Genbank gene 582742 583932 . + . ID=gene-AC3ASX_03210;Name=AC3ASX_03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03210 JBYLIA010000001.1 Protein Homology CDS 582742 583932 . + 0 ID=cds-MHV1764602.1;Parent=gene-AC3ASX_03210;Dbxref=NCBI_GP:MHV1764602.1;Name=MHV1764602.1;Ontology_term=GO:0015846,GO:0019808,GO:0030288,GO:0055052;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018298497.1;locus_tag=AC3ASX_03210;product=polyamine ABC transporter substrate-binding protein;protein_id=MHV1764602.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 584045 584927 . - . ID=gene-AC3ASX_03215;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=pseudogene;locus_tag=AC3ASX_03215;pseudo=true JBYLIA010000001.1 Protein Homology CDS 584045 584927 . - 0 ID=cds-AC3ASX_03215;Parent=gene-AC3ASX_03215;Note=frameshifted%3B internal stop;Ontology_term=GO:0006412,GO:0003924,GO:0005525,GO:0043022;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004288167.1;locus_tag=AC3ASX_03215;product=ribosome small subunit-dependent GTPase A;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 585083 585802 . + . ID=gene-AC3ASX_03220;Name=AC3ASX_03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03220 JBYLIA010000001.1 Protein Homology CDS 585083 585802 . + 0 ID=cds-MHV1764603.1;Parent=gene-AC3ASX_03220;Dbxref=NCBI_GP:MHV1764603.1;Name=MHV1764603.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026894.1;locus_tag=AC3ASX_03220;product=DUF2147 domain-containing protein;protein_id=MHV1764603.1;transl_table=11 JBYLIA010000001.1 Genbank gene 585871 586533 . + . ID=gene-AC3ASX_03225;Name=AC3ASX_03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03225 JBYLIA010000001.1 Protein Homology CDS 585871 586533 . + 0 ID=cds-MHV1764604.1;Parent=gene-AC3ASX_03225;Dbxref=NCBI_GP:MHV1764604.1;Name=MHV1764604.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429759.1;locus_tag=AC3ASX_03225;product=DUF2147 domain-containing protein;protein_id=MHV1764604.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 586540 588343 . + . ID=gene-AC3ASX_03230;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=pseudogene;locus_tag=AC3ASX_03230;pseudo=true JBYLIA010000001.1 Protein Homology CDS 586540 588343 . + 0 ID=cds-AC3ASX_03230;Parent=gene-AC3ASX_03230;Note=frameshifted%3B internal stop;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983;gbkey=CDS;gene=mutL;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549504.1;locus_tag=AC3ASX_03230;product=DNA mismatch repair endonuclease MutL;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 588531 588758 . + . ID=gene-AC3ASX_03235;Name=AC3ASX_03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03235 JBYLIA010000001.1 GeneMarkS-2+ CDS 588531 588758 . + 0 ID=cds-MHV1764605.1;Parent=gene-AC3ASX_03235;Dbxref=NCBI_GP:MHV1764605.1;Name=MHV1764605.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_03235;product=hypothetical protein;protein_id=MHV1764605.1;transl_table=11 JBYLIA010000001.1 Genbank gene 588782 589114 . + . ID=gene-AC3ASX_03240;Name=AC3ASX_03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03240 JBYLIA010000001.1 GeneMarkS-2+ CDS 588782 589114 . + 0 ID=cds-MHV1764606.1;Parent=gene-AC3ASX_03240;Dbxref=NCBI_GP:MHV1764606.1;Name=MHV1764606.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_03240;product=hypothetical protein;protein_id=MHV1764606.1;transl_table=11 JBYLIA010000001.1 Genbank gene 589965 590174 . + . ID=gene-AC3ASX_03245;Name=AC3ASX_03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03245 JBYLIA010000001.1 GeneMarkS-2+ CDS 589965 590174 . + 0 ID=cds-MHV1764607.1;Parent=gene-AC3ASX_03245;Dbxref=NCBI_GP:MHV1764607.1;Name=MHV1764607.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_03245;product=MFS transporter;protein_id=MHV1764607.1;transl_table=11 JBYLIA010000001.1 Genbank gene 590651 590953 . + . ID=gene-AC3ASX_03250;Name=AC3ASX_03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03250 JBYLIA010000001.1 GeneMarkS-2+ CDS 590651 590953 . + 0 ID=cds-MHV1764608.1;Parent=gene-AC3ASX_03250;Dbxref=NCBI_GP:MHV1764608.1;Name=MHV1764608.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_03250;product=hypothetical protein;protein_id=MHV1764608.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 591178 592450 . - . ID=gene-AC3ASX_03255;Name=AC3ASX_03255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03255;pseudo=true JBYLIA010000001.1 Protein Homology CDS 591178 592450 . - 0 ID=cds-AC3ASX_03255;Parent=gene-AC3ASX_03255;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035837.1;locus_tag=AC3ASX_03255;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 592555 593505 . - . ID=gene-AC3ASX_03260;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=pseudogene;locus_tag=AC3ASX_03260;pseudo=true JBYLIA010000001.1 Protein Homology CDS 592555 593505 . - 0 ID=cds-AC3ASX_03260;Parent=gene-AC3ASX_03260;Note=frameshifted;Ontology_term=GO:0019430,GO:0004791,GO:0071949,GO:0005737;gbkey=CDS;gene=trxB;go_component=cytoplasm|0005737||IEA;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA,FAD binding|0071949||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020310.1;locus_tag=AC3ASX_03260;product=thioredoxin-disulfide reductase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 593678 593899 . - . ID=gene-AC3ASX_03265;Name=AC3ASX_03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03265 JBYLIA010000001.1 Protein Homology CDS 593678 593899 . - 0 ID=cds-MHV1764609.1;Parent=gene-AC3ASX_03265;Dbxref=NCBI_GP:MHV1764609.1;Name=MHV1764609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025232.1;locus_tag=AC3ASX_03265;product=GIY-YIG nuclease family protein;protein_id=MHV1764609.1;transl_table=11 JBYLIA010000001.1 Genbank gene 593972 594634 . - . ID=gene-AC3ASX_03270;Name=AC3ASX_03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03270 JBYLIA010000001.1 Protein Homology CDS 593972 594634 . - 0 ID=cds-MHV1764610.1;Parent=gene-AC3ASX_03270;Dbxref=NCBI_GP:MHV1764610.1;Name=MHV1764610.1;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549510.1;locus_tag=AC3ASX_03270;product=HAD-IA family hydrolase;protein_id=MHV1764610.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 594770 595491 . - . ID=gene-AC3ASX_03275;Name=AC3ASX_03275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03275;pseudo=true JBYLIA010000001.1 Protein Homology CDS 594770 595491 . - 0 ID=cds-AC3ASX_03275;Parent=gene-AC3ASX_03275;Note=frameshifted%3B internal stop;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026874.1;locus_tag=AC3ASX_03275;product=copper homeostasis protein CutC;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 595781 596068 . + . ID=gene-AC3ASX_03280;Name=AC3ASX_03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03280 JBYLIA010000001.1 Protein Homology CDS 595781 596068 . + 0 ID=cds-MHV1764611.1;Parent=gene-AC3ASX_03280;Dbxref=NCBI_GP:MHV1764611.1;Name=MHV1764611.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019204.7;locus_tag=AC3ASX_03280;product=DUF1543 domain-containing protein;protein_id=MHV1764611.1;transl_table=11 JBYLIA010000001.1 Genbank gene 596486 596593 . + . ID=gene-AC3ASX_03285;Name=AC3ASX_03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03285 JBYLIA010000001.1 Protein Homology CDS 596486 596593 . + 0 ID=cds-MHV1764612.1;Parent=gene-AC3ASX_03285;Dbxref=NCBI_GP:MHV1764612.1;Name=MHV1764612.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022633.7;locus_tag=AC3ASX_03285;product=DUF2971 domain-containing protein;protein_id=MHV1764612.1;transl_table=11 JBYLIA010000001.1 Genbank gene 596733 596951 . + . ID=gene-AC3ASX_03290;Name=AC3ASX_03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03290 JBYLIA010000001.1 GeneMarkS-2+ CDS 596733 596951 . + 0 ID=cds-MHV1764613.1;Parent=gene-AC3ASX_03290;Dbxref=NCBI_GP:MHV1764613.1;Name=MHV1764613.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_03290;product=hypothetical protein;protein_id=MHV1764613.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 596993 597144 . - . ID=gene-AC3ASX_03295;Name=AC3ASX_03295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03295;pseudo=true JBYLIA010000001.1 Protein Homology CDS 596993 597144 . - 0 ID=cds-AC3ASX_03295;Parent=gene-AC3ASX_03295;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429754.1;locus_tag=AC3ASX_03295;product=asparaginase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 597328 597540 . + . ID=gene-AC3ASX_03300;Name=AC3ASX_03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03300 JBYLIA010000001.1 Protein Homology CDS 597328 597540 . + 0 ID=cds-MHV1764614.1;Parent=gene-AC3ASX_03300;Dbxref=NCBI_GP:MHV1764614.1;Name=MHV1764614.1;Ontology_term=GO:0016846,GO:0046872;gbkey=CDS;go_function=carbon-sulfur lyase activity|0016846||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF016701.8;locus_tag=AC3ASX_03300;product=GFA family protein;protein_id=MHV1764614.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 597741 598306 . - . ID=gene-AC3ASX_03305;Name=AC3ASX_03305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03305;pseudo=true JBYLIA010000001.1 Protein Homology CDS 597741 598306 . - 0 ID=cds-AC3ASX_03305;Parent=gene-AC3ASX_03305;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016919.1;locus_tag=AC3ASX_03305;product=AI-2E family transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 598580 598720 . + . ID=gene-AC3ASX_03310;Name=AC3ASX_03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03310 JBYLIA010000001.1 GeneMarkS-2+ CDS 598580 598720 . + 0 ID=cds-MHV1764615.1;Parent=gene-AC3ASX_03310;Dbxref=NCBI_GP:MHV1764615.1;Name=MHV1764615.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_03310;product=hypothetical protein;protein_id=MHV1764615.1;transl_table=11 JBYLIA010000001.1 Genbank gene 599053 599400 . - . ID=gene-AC3ASX_03315;Name=AC3ASX_03315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03315 JBYLIA010000001.1 GeneMarkS-2+ CDS 599053 599400 . - 0 ID=cds-MHV1764616.1;Parent=gene-AC3ASX_03315;Dbxref=NCBI_GP:MHV1764616.1;Name=MHV1764616.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_03315;product=hypothetical protein;protein_id=MHV1764616.1;transl_table=11 JBYLIA010000001.1 Genbank gene 599750 600622 . - . ID=gene-AC3ASX_03320;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=AC3ASX_03320 JBYLIA010000001.1 Protein Homology CDS 599750 600622 . - 0 ID=cds-MHV1764617.1;Parent=gene-AC3ASX_03320;Dbxref=NCBI_GP:MHV1764617.1;Name=MHV1764617.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014715131.1;locus_tag=AC3ASX_03320;product=succinate--CoA ligase subunit alpha;protein_id=MHV1764617.1;transl_table=11 JBYLIA010000001.1 Genbank gene 600654 601817 . - . ID=gene-AC3ASX_03325;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=AC3ASX_03325 JBYLIA010000001.1 Protein Homology CDS 600654 601817 . - 0 ID=cds-MHV1764618.1;Parent=gene-AC3ASX_03325;Dbxref=NCBI_GP:MHV1764618.1;Name=MHV1764618.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013923499.1;locus_tag=AC3ASX_03325;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=MHV1764618.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 602000 603920 . + . ID=gene-AC3ASX_03330;Name=AC3ASX_03330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03330;pseudo=true JBYLIA010000001.1 Protein Homology CDS 602000 603920 . + 0 ID=cds-AC3ASX_03330;Parent=gene-AC3ASX_03330;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011457502.1;locus_tag=AC3ASX_03330;product=TIGR03546 family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 604170 604937 . + . ID=gene-AC3ASX_03335;Name=AC3ASX_03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03335 JBYLIA010000001.1 Protein Homology CDS 604170 604937 . + 0 ID=cds-MHV1764619.1;Parent=gene-AC3ASX_03335;Dbxref=NCBI_GP:MHV1764619.1;Name=MHV1764619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549521.1;locus_tag=AC3ASX_03335;product=thioredoxin domain-containing protein;protein_id=MHV1764619.1;transl_table=11 JBYLIA010000001.1 Genbank gene 604944 605927 . - . ID=gene-AC3ASX_03340;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=AC3ASX_03340 JBYLIA010000001.1 Protein Homology CDS 604944 605927 . - 0 ID=cds-MHV1764620.1;Parent=gene-AC3ASX_03340;Dbxref=NCBI_GP:MHV1764620.1;Name=MHV1764620.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038657.1;locus_tag=AC3ASX_03340;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=MHV1764620.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 605961 606757 . - . ID=gene-AC3ASX_03345;Name=chaC;gbkey=Gene;gene=chaC;gene_biotype=pseudogene;locus_tag=AC3ASX_03345;pseudo=true JBYLIA010000001.1 Protein Homology CDS 605961 606757 . - 0 ID=cds-AC3ASX_03345;Parent=gene-AC3ASX_03345;Note=frameshifted%3B internal stop;gbkey=CDS;gene=chaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016902.1;locus_tag=AC3ASX_03345;product=gamma-glutamylcyclotransferase ChaC;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 606939 609350 . + . ID=gene-AC3ASX_03350;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=AC3ASX_03350 JBYLIA010000001.1 Protein Homology CDS 606939 609350 . + 0 ID=cds-MHV1764621.1;Parent=gene-AC3ASX_03350;Dbxref=NCBI_GP:MHV1764621.1;Name=MHV1764621.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429748.1;locus_tag=AC3ASX_03350;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=MHV1764621.1;transl_table=11 JBYLIA010000001.1 Genbank gene 610095 610220 . - . ID=gene-AC3ASX_03355;Name=AC3ASX_03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03355 JBYLIA010000001.1 GeneMarkS-2+ CDS 610095 610220 . - 0 ID=cds-MHV1764622.1;Parent=gene-AC3ASX_03355;Dbxref=NCBI_GP:MHV1764622.1;Name=MHV1764622.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_03355;product=hypothetical protein;protein_id=MHV1764622.1;transl_table=11 JBYLIA010000001.1 Genbank gene 610657 611520 . + . ID=gene-AC3ASX_03360;Name=pdxS;gbkey=Gene;gene=pdxS;gene_biotype=protein_coding;locus_tag=AC3ASX_03360 JBYLIA010000001.1 Protein Homology CDS 610657 611520 . + 0 ID=cds-MHV1764623.1;Parent=gene-AC3ASX_03360;Dbxref=NCBI_GP:MHV1764623.1;Name=MHV1764623.1;Ontology_term=GO:0042823,GO:0003824;gbkey=CDS;gene=pdxS;go_function=catalytic activity|0003824||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429747.1;locus_tag=AC3ASX_03360;product=pyridoxal 5'-phosphate synthase lyase subunit PdxS;protein_id=MHV1764623.1;transl_table=11 JBYLIA010000001.1 Genbank gene 611523 612062 . + . ID=gene-AC3ASX_03365;Name=pdxT;gbkey=Gene;gene=pdxT;gene_biotype=protein_coding;gene_synonym=pdx2;locus_tag=AC3ASX_03365 JBYLIA010000001.1 Protein Homology CDS 611523 612062 . + 0 ID=cds-MHV1764624.1;Parent=gene-AC3ASX_03365;Dbxref=NCBI_GP:MHV1764624.1;Name=MHV1764624.1;Ontology_term=GO:0042823,GO:0004359,GO:0036381;gbkey=CDS;gene=pdxT;go_function=glutaminase activity|0004359||IEA,pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity|0036381||IEA;go_process=pyridoxal 5'-phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549524.1;locus_tag=AC3ASX_03365;product=pyridoxal 5'-phosphate synthase glutaminase subunit PdxT;protein_id=MHV1764624.1;transl_table=11 JBYLIA010000001.1 Genbank gene 612066 612890 . - . ID=gene-AC3ASX_03370;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=AC3ASX_03370 JBYLIA010000001.1 Protein Homology CDS 612066 612890 . - 0 ID=cds-MHV1764625.1;Parent=gene-AC3ASX_03370;Dbxref=NCBI_GP:MHV1764625.1;Name=MHV1764625.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547855.1;locus_tag=AC3ASX_03370;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=MHV1764625.1;transl_table=11 JBYLIA010000001.1 Genbank gene 612984 615083 . + . ID=gene-AC3ASX_03375;Name=migR;gbkey=Gene;gene=migR;gene_biotype=protein_coding;locus_tag=AC3ASX_03375 JBYLIA010000001.1 Protein Homology CDS 612984 615083 . + 0 ID=cds-MHV1764626.1;Parent=gene-AC3ASX_03375;Dbxref=NCBI_GP:MHV1764626.1;Name=MHV1764626.1;gbkey=CDS;gene=migR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011457501.1;locus_tag=AC3ASX_03375;product=iglABCD operon regulator MigR;protein_id=MHV1764626.1;transl_table=11 JBYLIA010000001.1 Genbank gene 615090 616007 . + . ID=gene-AC3ASX_03380;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=AC3ASX_03380 JBYLIA010000001.1 Protein Homology CDS 615090 616007 . + 0 ID=cds-MHV1764627.1;Parent=gene-AC3ASX_03380;Dbxref=NCBI_GP:MHV1764627.1;Name=MHV1764627.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547857.1;locus_tag=AC3ASX_03380;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=MHV1764627.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 616004 616353 . + . ID=gene-AC3ASX_03385;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=pseudogene;locus_tag=AC3ASX_03385;pseudo=true JBYLIA010000001.1 Protein Homology CDS 616004 616353 . + 0 ID=cds-AC3ASX_03385;Parent=gene-AC3ASX_03385;Note=frameshifted;Ontology_term=GO:0000910,GO:0016020;gbkey=CDS;gene=ftsL;go_component=membrane|0016020||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019417.1;locus_tag=AC3ASX_03385;product=cell division protein FtsL;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 616346 618040 . + . ID=gene-AC3ASX_03390;Name=AC3ASX_03390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03390 JBYLIA010000001.1 Protein Homology CDS 616346 618040 . + 0 ID=cds-MHV1764628.1;Parent=gene-AC3ASX_03390;Dbxref=NCBI_GP:MHV1764628.1;Name=MHV1764628.1;Ontology_term=GO:0009252,GO:0051301,GO:0071555,GO:0008658,GO:0008955,GO:0009002,GO:0016787,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020496.1;locus_tag=AC3ASX_03390;product=peptidoglycan D%2CD-transpeptidase FtsI family protein;protein_id=MHV1764628.1;transl_table=11 JBYLIA010000001.1 Genbank gene 618146 618412 . + . ID=gene-AC3ASX_03395;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=AC3ASX_03395 JBYLIA010000001.1 Protein Homology CDS 618146 618412 . + 0 ID=cds-MHV1764629.1;Parent=gene-AC3ASX_03395;Dbxref=NCBI_GP:MHV1764629.1;Name=MHV1764629.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004288130.1;locus_tag=AC3ASX_03395;product=30S ribosomal protein S15;protein_id=MHV1764629.1;transl_table=11 JBYLIA010000001.1 Genbank gene 618469 620550 . + . ID=gene-AC3ASX_03400;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=AC3ASX_03400 JBYLIA010000001.1 Protein Homology CDS 618469 620550 . + 0 ID=cds-MHV1764630.1;Parent=gene-AC3ASX_03400;Dbxref=NCBI_GP:MHV1764630.1;Name=MHV1764630.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003041976.1;locus_tag=AC3ASX_03400;product=polyribonucleotide nucleotidyltransferase;protein_id=MHV1764630.1;transl_table=11 JBYLIA010000001.1 Genbank gene 620554 620904 . + . ID=gene-AC3ASX_03405;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=AC3ASX_03405 JBYLIA010000001.1 Protein Homology CDS 620554 620904 . + 0 ID=cds-MHV1764631.1;Parent=gene-AC3ASX_03405;Dbxref=NCBI_GP:MHV1764631.1;Name=MHV1764631.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547867.1;locus_tag=AC3ASX_03405;product=iron-sulfur cluster insertion protein ErpA;protein_id=MHV1764631.1;transl_table=11 JBYLIA010000001.1 Genbank gene 620945 621772 . + . ID=gene-AC3ASX_03410;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=AC3ASX_03410 JBYLIA010000001.1 Protein Homology CDS 620945 621772 . + 0 ID=cds-MHV1764632.1;Parent=gene-AC3ASX_03410;Dbxref=NCBI_GP:MHV1764632.1;Name=MHV1764632.1;Ontology_term=GO:0009058,GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004288127.1;locus_tag=AC3ASX_03410;product=3-deoxy-8-phosphooctulonate synthase;protein_id=MHV1764632.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 621783 622447 . + . ID=gene-AC3ASX_03415;Name=udk;gbkey=Gene;gene=udk;gene_biotype=pseudogene;locus_tag=AC3ASX_03415;pseudo=true JBYLIA010000001.1 Protein Homology CDS 621783 622447 . + 0 ID=cds-AC3ASX_03415;Parent=gene-AC3ASX_03415;Note=frameshifted;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004288126.1;locus_tag=AC3ASX_03415;product=uridine kinase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 622440 622658 . + . ID=gene-AC3ASX_03420;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=AC3ASX_03420 JBYLIA010000001.1 Protein Homology CDS 622440 622658 . + 0 ID=cds-MHV1764633.1;Parent=gene-AC3ASX_03420;Dbxref=NCBI_GP:MHV1764633.1;Name=MHV1764633.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003023493.1;locus_tag=AC3ASX_03420;product=DNA-directed RNA polymerase subunit omega;protein_id=MHV1764633.1;transl_table=11 JBYLIA010000001.1 Genbank gene 622722 622797 . + . ID=gene-AC3ASX_03425;Name=AC3ASX_03425;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_03425 JBYLIA010000001.1 tRNAscan-SE tRNA 622722 622797 . + . ID=rna-AC3ASX_03425;Parent=gene-AC3ASX_03425;anticodon=(pos:622755..622757);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_03425;product=tRNA-Val JBYLIA010000001.1 tRNAscan-SE exon 622722 622797 . + . ID=exon-AC3ASX_03425-1;Parent=rna-AC3ASX_03425;anticodon=(pos:622755..622757);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_03425;product=tRNA-Val JBYLIA010000001.1 Genbank pseudogene 622962 623455 . + . ID=gene-AC3ASX_03430;Name=AC3ASX_03430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03430;pseudo=true JBYLIA010000001.1 Protein Homology CDS 622962 623455 . + 0 ID=cds-AC3ASX_03430;Parent=gene-AC3ASX_03430;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012279743.1;locus_tag=AC3ASX_03430;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 623570 623710 . + . ID=gene-AC3ASX_03435;Name=AC3ASX_03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03435 JBYLIA010000001.1 GeneMarkS-2+ CDS 623570 623710 . + 0 ID=cds-MHV1764634.1;Parent=gene-AC3ASX_03435;Dbxref=NCBI_GP:MHV1764634.1;Name=MHV1764634.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_03435;product=hypothetical protein;protein_id=MHV1764634.1;transl_table=11 JBYLIA010000001.1 Genbank gene 623758 624057 . + . ID=gene-AC3ASX_03440;Name=AC3ASX_03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03440 JBYLIA010000001.1 GeneMarkS-2+ CDS 623758 624057 . + 0 ID=cds-MHV1764635.1;Parent=gene-AC3ASX_03440;Dbxref=NCBI_GP:MHV1764635.1;Name=MHV1764635.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_03440;product=hypothetical protein;protein_id=MHV1764635.1;transl_table=11 JBYLIA010000001.1 Genbank gene 624075 624647 . + . ID=gene-AC3ASX_03445;Name=AC3ASX_03445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03445 JBYLIA010000001.1 Protein Homology CDS 624075 624647 . + 0 ID=cds-MHV1764636.1;Parent=gene-AC3ASX_03445;Dbxref=NCBI_GP:MHV1764636.1;Name=MHV1764636.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017743.7;locus_tag=AC3ASX_03445;product=methyltransferase domain-containing protein;protein_id=MHV1764636.1;transl_table=11 JBYLIA010000001.1 Genbank gene 624616 624921 . + . ID=gene-AC3ASX_03450;Name=AC3ASX_03450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03450 JBYLIA010000001.1 Protein Homology CDS 624616 624921 . + 0 ID=cds-MHV1764637.1;Parent=gene-AC3ASX_03450;Dbxref=NCBI_GP:MHV1764637.1;Name=MHV1764637.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017743.7;locus_tag=AC3ASX_03450;product=hypothetical protein;protein_id=MHV1764637.1;transl_table=11 JBYLIA010000001.1 Genbank gene 624984 625148 . + . ID=gene-AC3ASX_03455;Name=AC3ASX_03455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03455 JBYLIA010000001.1 GeneMarkS-2+ CDS 624984 625148 . + 0 ID=cds-MHV1764638.1;Parent=gene-AC3ASX_03455;Dbxref=NCBI_GP:MHV1764638.1;Name=MHV1764638.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_03455;product=hypothetical protein;protein_id=MHV1764638.1;transl_table=11 JBYLIA010000001.1 Genbank gene 625314 625568 . + . ID=gene-AC3ASX_03460;Name=AC3ASX_03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03460 JBYLIA010000001.1 Protein Homology CDS 625314 625568 . + 0 ID=cds-MHV1764639.1;Parent=gene-AC3ASX_03460;Dbxref=NCBI_GP:MHV1764639.1;Name=MHV1764639.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012692.7;locus_tag=AC3ASX_03460;product=ROK family protein;protein_id=MHV1764639.1;transl_table=11 JBYLIA010000001.1 Genbank gene 625621 625827 . + . ID=gene-AC3ASX_03465;Name=AC3ASX_03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03465 JBYLIA010000001.1 GeneMarkS-2+ CDS 625621 625827 . + 0 ID=cds-MHV1764640.1;Parent=gene-AC3ASX_03465;Dbxref=NCBI_GP:MHV1764640.1;Name=MHV1764640.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_03465;product=hypothetical protein;protein_id=MHV1764640.1;transl_table=11 JBYLIA010000001.1 Genbank gene 625844 626644 . + . ID=gene-AC3ASX_03470;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=AC3ASX_03470 JBYLIA010000001.1 Protein Homology CDS 625844 626644 . + 0 ID=cds-MHV1764641.1;Parent=gene-AC3ASX_03470;Dbxref=NCBI_GP:MHV1764641.1;Name=MHV1764641.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547875.1;locus_tag=AC3ASX_03470;product=nicotinamide riboside transporter PnuC;protein_id=MHV1764641.1;transl_table=11 JBYLIA010000001.1 Genbank gene 626747 627985 . + . ID=gene-AC3ASX_03475;Name=AC3ASX_03475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03475 JBYLIA010000001.1 Protein Homology CDS 626747 627985 . + 0 ID=cds-MHV1764642.1;Parent=gene-AC3ASX_03475;Dbxref=NCBI_GP:MHV1764642.1;Name=MHV1764642.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549536.1;locus_tag=AC3ASX_03475;product=MFS transporter;protein_id=MHV1764642.1;transl_table=11 JBYLIA010000001.1 Genbank gene 628093 629379 . + . ID=gene-AC3ASX_03480;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=AC3ASX_03480 JBYLIA010000001.1 Protein Homology CDS 628093 629379 . + 0 ID=cds-MHV1764643.1;Parent=gene-AC3ASX_03480;Dbxref=NCBI_GP:MHV1764643.1;Name=MHV1764643.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019896374.1;locus_tag=AC3ASX_03480;product=phosphopyruvate hydratase;protein_id=MHV1764643.1;transl_table=11 JBYLIA010000001.1 Genbank gene 629470 629760 . + . ID=gene-AC3ASX_03485;Name=AC3ASX_03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03485 JBYLIA010000001.1 Protein Homology CDS 629470 629760 . + 0 ID=cds-MHV1764644.1;Parent=gene-AC3ASX_03485;Dbxref=NCBI_GP:MHV1764644.1;Name=MHV1764644.1;Ontology_term=GO:0051301;gbkey=CDS;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547878.1;locus_tag=AC3ASX_03485;product=FtsB family cell division protein;protein_id=MHV1764644.1;transl_table=11 JBYLIA010000001.1 Genbank gene 629750 630442 . + . ID=gene-AC3ASX_03490;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=AC3ASX_03490 JBYLIA010000001.1 Protein Homology CDS 629750 630442 . + 0 ID=cds-MHV1764645.1;Parent=gene-AC3ASX_03490;Dbxref=NCBI_GP:MHV1764645.1;Name=MHV1764645.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004288116.1;locus_tag=AC3ASX_03490;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=MHV1764645.1;transl_table=11 JBYLIA010000001.1 Genbank gene 630447 631709 . - . ID=gene-AC3ASX_03495;Name=AC3ASX_03495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03495 JBYLIA010000001.1 Protein Homology CDS 630447 631709 . - 0 ID=cds-MHV1764646.1;Parent=gene-AC3ASX_03495;Dbxref=NCBI_GP:MHV1764646.1;Name=MHV1764646.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547880.1;locus_tag=AC3ASX_03495;product=amino acid permease;protein_id=MHV1764646.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 631711 632771 . - . ID=gene-AC3ASX_03500;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=pseudogene;locus_tag=AC3ASX_03500;pseudo=true JBYLIA010000001.1 Protein Homology CDS 631711 632771 . - 0 ID=cds-AC3ASX_03500;Parent=gene-AC3ASX_03500;Note=frameshifted;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016849.1;locus_tag=AC3ASX_03500;product=L-threonine 3-dehydrogenase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 632794 633989 . - . ID=gene-AC3ASX_03505;Name=AC3ASX_03505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03505;pseudo=true JBYLIA010000001.1 Protein Homology CDS 632794 633989 . - 0 ID=cds-AC3ASX_03505;Parent=gene-AC3ASX_03505;Note=frameshifted;Ontology_term=GO:0009058,GO:0008890,GO:0030170;gbkey=CDS;go_function=glycine C-acetyltransferase activity|0008890||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF012382.7;locus_tag=AC3ASX_03505;product=glycine C-acetyltransferase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 634471 635136 . + . ID=gene-AC3ASX_03510;Name=AC3ASX_03510;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03510;pseudo=true JBYLIA010000001.1 Protein Homology CDS 634471 635136 . + 0 ID=cds-AC3ASX_03510;Parent=gene-AC3ASX_03510;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011648753.1;locus_tag=AC3ASX_03510;product=fibronectin type III domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 635863 636285 . + . ID=gene-AC3ASX_03515;Name=AC3ASX_03515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03515;pseudo=true JBYLIA010000001.1 Protein Homology CDS 635863 636285 . + 0 ID=cds-AC3ASX_03515;Parent=gene-AC3ASX_03515;Note=internal stop;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF012760.7;locus_tag=AC3ASX_03515;product=formyltransferase family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 636668 637888 . + . ID=gene-AC3ASX_03520;Name=AC3ASX_03520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03520;pseudo=true JBYLIA010000001.1 Protein Homology CDS 636668 637888 . + 0 ID=cds-AC3ASX_03520;Parent=gene-AC3ASX_03520;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016819.1;locus_tag=AC3ASX_03520;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 637872 639197 . - . ID=gene-AC3ASX_03525;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=AC3ASX_03525 JBYLIA010000001.1 Protein Homology CDS 637872 639197 . - 0 ID=cds-MHV1764647.1;Parent=gene-AC3ASX_03525;Dbxref=NCBI_GP:MHV1764647.1;Name=MHV1764647.1;Ontology_term=GO:0015949,GO:0008832;gbkey=CDS;gene=dgt;go_function=dGTPase activity|0008832||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016820.1;locus_tag=AC3ASX_03525;product=dGTP triphosphohydrolase;protein_id=MHV1764647.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 639302 641524 . - . ID=gene-AC3ASX_03530;Name=katG;gbkey=Gene;gene=katG;gene_biotype=pseudogene;locus_tag=AC3ASX_03530;pseudo=true JBYLIA010000001.1 Protein Homology CDS 639302 641524 . - 0 ID=cds-AC3ASX_03530;Parent=gene-AC3ASX_03530;Note=frameshifted%3B internal stop;Ontology_term=GO:0006979,GO:0004096,GO:0004601,GO:0020037;gbkey=CDS;gene=katG;go_function=catalase activity|0004096||IEA,peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549546.1;locus_tag=AC3ASX_03530;product=catalase/peroxidase HPI;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 641730 642524 . - . ID=gene-AC3ASX_03535;Name=AC3ASX_03535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03535;pseudo=true JBYLIA010000001.1 Protein Homology CDS 641730 642524 . - 0 ID=cds-AC3ASX_03535;Parent=gene-AC3ASX_03535;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019379.1;locus_tag=AC3ASX_03535;product=SDR family oxidoreductase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 642518 643690 . - . ID=gene-AC3ASX_03540;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=pseudogene;locus_tag=AC3ASX_03540;pseudo=true JBYLIA010000001.1 Protein Homology CDS 642518 643690 . - 0 ID=cds-AC3ASX_03540;Parent=gene-AC3ASX_03540;Note=frameshifted;Ontology_term=GO:0009252,GO:0004175,GO:0009002;gbkey=CDS;gene=dacB;go_function=endopeptidase activity|0004175||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010032825.1;locus_tag=AC3ASX_03540;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine endopeptidase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 643705 644821 . - . ID=gene-AC3ASX_03545;Name=AC3ASX_03545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03545;pseudo=true JBYLIA010000001.1 Protein Homology CDS 643705 644821 . - 0 ID=cds-AC3ASX_03545;Parent=gene-AC3ASX_03545;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013923450.1;locus_tag=AC3ASX_03545;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 644932 645959 . - . ID=gene-AC3ASX_03550;Name=AC3ASX_03550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03550;pseudo=true JBYLIA010000001.1 Protein Homology CDS 644932 645959 . - 0 ID=cds-AC3ASX_03550;Parent=gene-AC3ASX_03550;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549552.1;locus_tag=AC3ASX_03550;product=glycerophosphodiester phosphodiesterase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 646366 646860 . + . ID=gene-AC3ASX_03555;Name=AC3ASX_03555;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03555;pseudo=true JBYLIA010000001.1 Protein Homology CDS 646366 646860 . + 0 ID=cds-AC3ASX_03555;Parent=gene-AC3ASX_03555;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020548.1;locus_tag=AC3ASX_03555;product=ABC transporter permease;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 646976 648514 . + . ID=gene-AC3ASX_03560;Name=AC3ASX_03560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03560;pseudo=true JBYLIA010000001.1 Protein Homology CDS 646976 648514 . + 0 ID=cds-AC3ASX_03560;Parent=gene-AC3ASX_03560;Note=frameshifted;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022095.1;locus_tag=AC3ASX_03560;product=SulP family inorganic anion transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 648514 648894 . + . ID=gene-AC3ASX_03565;Name=AC3ASX_03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03565 JBYLIA010000001.1 Protein Homology CDS 648514 648894 . + 0 ID=cds-MHV1764648.1;Parent=gene-AC3ASX_03565;Dbxref=NCBI_GP:MHV1764648.1;Name=MHV1764648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004288078.1;locus_tag=AC3ASX_03565;product=RidA family protein;protein_id=MHV1764648.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 649049 650204 . + . ID=gene-AC3ASX_03570;Name=AC3ASX_03570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03570;pseudo=true JBYLIA010000001.1 Protein Homology CDS 649049 650204 . + 0 ID=cds-AC3ASX_03570;Parent=gene-AC3ASX_03570;Note=frameshifted%3B internal stop;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004288076.1;locus_tag=AC3ASX_03570;product=cation:dicarboxylate symporter family transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 650218 651867 . - . ID=gene-AC3ASX_03575;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=AC3ASX_03575 JBYLIA010000001.1 Protein Homology CDS 650218 651867 . - 0 ID=cds-MHV1764649.1;Parent=gene-AC3ASX_03575;Dbxref=NCBI_GP:MHV1764649.1;Name=MHV1764649.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026784.1;locus_tag=AC3ASX_03575;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=MHV1764649.1;transl_table=11 JBYLIA010000001.1 Genbank gene 651864 653645 . - . ID=gene-AC3ASX_03580;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=AC3ASX_03580 JBYLIA010000001.1 Protein Homology CDS 651864 653645 . - 0 ID=cds-MHV1764650.1;Parent=gene-AC3ASX_03580;Dbxref=NCBI_GP:MHV1764650.1;Name=MHV1764650.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003042020.1;locus_tag=AC3ASX_03580;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=MHV1764650.1;transl_table=11 JBYLIA010000001.1 Genbank gene 653853 653996 . + . ID=gene-AC3ASX_03585;Name=AC3ASX_03585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03585 JBYLIA010000001.1 GeneMarkS-2+ CDS 653853 653996 . + 0 ID=cds-MHV1764651.1;Parent=gene-AC3ASX_03585;Dbxref=NCBI_GP:MHV1764651.1;Name=MHV1764651.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_03585;product=hypothetical protein;protein_id=MHV1764651.1;transl_table=11 JBYLIA010000001.1 Genbank gene 654117 654506 . + . ID=gene-AC3ASX_03590;Name=AC3ASX_03590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03590 JBYLIA010000001.1 Protein Homology CDS 654117 654506 . + 0 ID=cds-MHV1764652.1;Parent=gene-AC3ASX_03590;Dbxref=NCBI_GP:MHV1764652.1;Name=MHV1764652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549567.1;locus_tag=AC3ASX_03590;product=rotein;protein_id=MHV1764652.1;transl_table=11 JBYLIA010000001.1 Genbank gene 654535 654735 . + . ID=gene-AC3ASX_03595;Name=AC3ASX_03595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03595 JBYLIA010000001.1 Protein Homology CDS 654535 654735 . + 0 ID=cds-MHV1764653.1;Parent=gene-AC3ASX_03595;Dbxref=NCBI_GP:MHV1764653.1;Name=MHV1764653.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003023908.1;locus_tag=AC3ASX_03595;product=hypothetical protein;protein_id=MHV1764653.1;transl_table=11 JBYLIA010000001.1 Genbank gene 654748 656004 . - . ID=gene-AC3ASX_03600;Name=AC3ASX_03600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03600 JBYLIA010000001.1 Protein Homology CDS 654748 656004 . - 0 ID=cds-MHV1764654.1;Parent=gene-AC3ASX_03600;Dbxref=NCBI_GP:MHV1764654.1;Name=MHV1764654.1;Ontology_term=GO:0140327,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=flippase activity|0140327||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014715183.1;locus_tag=AC3ASX_03600;product=lipopolysaccharide biosynthesis protein;protein_id=MHV1764654.1;transl_table=11 JBYLIA010000001.1 Genbank gene 656082 656981 . - . ID=gene-AC3ASX_03605;Name=AC3ASX_03605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03605 JBYLIA010000001.1 Protein Homology CDS 656082 656981 . - 0 ID=cds-MHV1764655.1;Parent=gene-AC3ASX_03605;Dbxref=NCBI_GP:MHV1764655.1;Name=MHV1764655.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016801.1;locus_tag=AC3ASX_03605;product=ROK family protein;protein_id=MHV1764655.1;transl_table=11 JBYLIA010000001.1 Genbank gene 657089 658369 . - . ID=gene-AC3ASX_03610;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=AC3ASX_03610 JBYLIA010000001.1 Protein Homology CDS 657089 658369 . - 0 ID=cds-MHV1764656.1;Parent=gene-AC3ASX_03610;Dbxref=NCBI_GP:MHV1764656.1;Name=MHV1764656.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003042030.1;locus_tag=AC3ASX_03610;product=serine--tRNA ligase;protein_id=MHV1764656.1;transl_table=11 JBYLIA010000001.1 Genbank gene 658384 659922 . - . ID=gene-AC3ASX_03615;Name=gpmI;gbkey=Gene;gene=gpmI;gene_biotype=protein_coding;gene_synonym=gpmM;locus_tag=AC3ASX_03615 JBYLIA010000001.1 Protein Homology CDS 658384 659922 . - 0 ID=cds-MHV1764657.1;Parent=gene-AC3ASX_03615;Dbxref=NCBI_GP:MHV1764657.1;Name=MHV1764657.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmI;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429716.1;locus_tag=AC3ASX_03615;product=2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase;protein_id=MHV1764657.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 660142 663189 . + . ID=gene-AC3ASX_03620;Name=AC3ASX_03620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03620;pseudo=true JBYLIA010000001.1 Protein Homology CDS 660142 663189 . + 0 ID=cds-AC3ASX_03620;Parent=gene-AC3ASX_03620;Note=frameshifted%3B internal stop;Ontology_term=GO:0016491,GO:0046872,GO:0050660,GO:0051536,GO:0071949;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,flavin adenine dinucleotide binding|0050660||IEA,iron-sulfur cluster binding|0051536||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022069.1;locus_tag=AC3ASX_03620;product=FAD-binding and (Fe-S)-binding domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 663213 663287 . + . ID=gene-AC3ASX_03625;Name=AC3ASX_03625;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_03625 JBYLIA010000001.1 tRNAscan-SE tRNA 663213 663287 . + . ID=rna-AC3ASX_03625;Parent=gene-AC3ASX_03625;anticodon=(pos:663245..663247);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_03625;product=tRNA-Lys JBYLIA010000001.1 tRNAscan-SE exon 663213 663287 . + . ID=exon-AC3ASX_03625-1;Parent=rna-AC3ASX_03625;anticodon=(pos:663245..663247);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_03625;product=tRNA-Lys JBYLIA010000001.1 Genbank pseudogene 663549 663742 . - . ID=gene-AC3ASX_03630;Name=AC3ASX_03630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03630;pseudo=true JBYLIA010000001.1 Protein Homology CDS 663549 663742 . - 0 ID=cds-AC3ASX_03630;Parent=gene-AC3ASX_03630;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016798.1;locus_tag=AC3ASX_03630;product=cytidine deaminase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 663773 664517 . - . ID=gene-AC3ASX_03635;Name=AC3ASX_03635;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03635;pseudo=true JBYLIA010000001.1 Protein Homology CDS 663773 664517 . - 0 ID=cds-AC3ASX_03635;Parent=gene-AC3ASX_03635;Note=frameshifted%3B internal stop;Ontology_term=GO:0009116,GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429714.1;locus_tag=AC3ASX_03635;product=phosphorylase family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 664632 665260 . + . ID=gene-AC3ASX_03640;Name=miaE;gbkey=Gene;gene=miaE;gene_biotype=pseudogene;locus_tag=AC3ASX_03640;pseudo=true JBYLIA010000001.1 Protein Homology CDS 664632 665260 . + 0 ID=cds-AC3ASX_03640;Parent=gene-AC3ASX_03640;Note=frameshifted%3B internal stop;Ontology_term=GO:0006400,GO:0045301;gbkey=CDS;gene=miaE;go_function=tRNA 2-(methylsulfanyl)-N(6)-isopentenyladenosine(37) hydroxylase activity|0045301||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547913.1;locus_tag=AC3ASX_03640;product=tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 665279 665929 . - . ID=gene-AC3ASX_03645;Name=AC3ASX_03645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03645;pseudo=true JBYLIA010000001.1 Protein Homology CDS 665279 665929 . - 0 ID=cds-AC3ASX_03645;Parent=gene-AC3ASX_03645;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014715193.1;locus_tag=AC3ASX_03645;product=trimeric intracellular cation channel family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 665962 666540 . - . ID=gene-AC3ASX_03650;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=AC3ASX_03650 JBYLIA010000001.1 Protein Homology CDS 665962 666540 . - 0 ID=cds-MHV1764658.1;Parent=gene-AC3ASX_03650;Dbxref=NCBI_GP:MHV1764658.1;Name=MHV1764658.1;Ontology_term=GO:0031167,GO:0052913;gbkey=CDS;gene=rsmD;go_function=16S rRNA (guanine(966)-N(2))-methyltransferase activity|0052913||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016791.1;locus_tag=AC3ASX_03650;product=16S rRNA (guanine(966)-N(2))-methyltransferase RsmD;protein_id=MHV1764658.1;transl_table=11 JBYLIA010000001.1 Genbank gene 666541 667764 . - . ID=gene-AC3ASX_03655;Name=AC3ASX_03655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03655 JBYLIA010000001.1 Protein Homology CDS 666541 667764 . - 0 ID=cds-MHV1764659.1;Parent=gene-AC3ASX_03655;Dbxref=NCBI_GP:MHV1764659.1;Name=MHV1764659.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011733625.1;locus_tag=AC3ASX_03655;product=M16 family metallopeptidase;protein_id=MHV1764659.1;transl_table=11 JBYLIA010000001.1 Genbank gene 667772 669025 . - . ID=gene-AC3ASX_03660;Name=AC3ASX_03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03660 JBYLIA010000001.1 Protein Homology CDS 667772 669025 . - 0 ID=cds-MHV1764660.1;Parent=gene-AC3ASX_03660;Dbxref=NCBI_GP:MHV1764660.1;Name=MHV1764660.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026765.1;locus_tag=AC3ASX_03660;product=M16 family metallopeptidase;protein_id=MHV1764660.1;transl_table=11 JBYLIA010000001.1 Genbank gene 669033 670094 . - . ID=gene-AC3ASX_03665;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=AC3ASX_03665 JBYLIA010000001.1 Protein Homology CDS 669033 670094 . - 0 ID=cds-MHV1764661.1;Parent=gene-AC3ASX_03665;Dbxref=NCBI_GP:MHV1764661.1;Name=MHV1764661.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033461.1;locus_tag=AC3ASX_03665;product=LPS export ABC transporter permease LptG;protein_id=MHV1764661.1;transl_table=11 JBYLIA010000001.1 Genbank gene 670094 671176 . - . ID=gene-AC3ASX_03670;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=AC3ASX_03670 JBYLIA010000001.1 Protein Homology CDS 670094 671176 . - 0 ID=cds-MHV1764662.1;Parent=gene-AC3ASX_03670;Dbxref=NCBI_GP:MHV1764662.1;Name=MHV1764662.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547919.1;locus_tag=AC3ASX_03670;product=LPS export ABC transporter permease LptF;protein_id=MHV1764662.1;transl_table=11 JBYLIA010000001.1 Genbank gene 671340 672791 . + . ID=gene-AC3ASX_03675;Name=AC3ASX_03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03675 JBYLIA010000001.1 Protein Homology CDS 671340 672791 . + 0 ID=cds-MHV1764663.1;Parent=gene-AC3ASX_03675;Dbxref=NCBI_GP:MHV1764663.1;Name=MHV1764663.1;Ontology_term=GO:0019538,GO:0070006;gbkey=CDS;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549578.1;locus_tag=AC3ASX_03675;product=leucyl aminopeptidase;protein_id=MHV1764663.1;transl_table=11 JBYLIA010000001.1 Genbank gene 672881 674341 . + . ID=gene-AC3ASX_03680;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=AC3ASX_03680 JBYLIA010000001.1 Protein Homology CDS 672881 674341 . + 0 ID=cds-MHV1764664.1;Parent=gene-AC3ASX_03680;Dbxref=NCBI_GP:MHV1764664.1;Name=MHV1764664.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016782.1;locus_tag=AC3ASX_03680;product=IMP dehydrogenase;protein_id=MHV1764664.1;transl_table=11 JBYLIA010000001.1 Genbank gene 674407 675060 . + . ID=gene-AC3ASX_03685;Name=AC3ASX_03685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03685 JBYLIA010000001.1 Protein Homology CDS 674407 675060 . + 0 ID=cds-MHV1764665.1;Parent=gene-AC3ASX_03685;Dbxref=NCBI_GP:MHV1764665.1;Name=MHV1764665.1;Ontology_term=GO:0006772,GO:0004788;gbkey=CDS;go_function=thiamine diphosphokinase activity|0004788||IEA;go_process=thiamine metabolic process|0006772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003042045.1;locus_tag=AC3ASX_03685;product=thiamine diphosphokinase;protein_id=MHV1764665.1;transl_table=11 JBYLIA010000001.1 Genbank gene 675047 676669 . + . ID=gene-AC3ASX_03690;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=AC3ASX_03690 JBYLIA010000001.1 Protein Homology CDS 675047 676669 . + 0 ID=cds-MHV1764666.1;Parent=gene-AC3ASX_03690;Dbxref=NCBI_GP:MHV1764666.1;Name=MHV1764666.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019354.1;locus_tag=AC3ASX_03690;product=glucose-6-phosphate isomerase;protein_id=MHV1764666.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 676670 677252 . + . ID=gene-AC3ASX_03695;Name=AC3ASX_03695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03695;pseudo=true JBYLIA010000001.1 Protein Homology CDS 676670 677252 . + 0 ID=cds-AC3ASX_03695;Parent=gene-AC3ASX_03695;Note=frameshifted%3B internal stop;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010032691.1;locus_tag=AC3ASX_03695;product=pilus assembly FimT family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 677287 677769 . + . ID=gene-AC3ASX_03700;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=AC3ASX_03700 JBYLIA010000001.1 Protein Homology CDS 677287 677769 . + 0 ID=cds-MHV1764667.1;Parent=gene-AC3ASX_03700;Dbxref=NCBI_GP:MHV1764667.1;Name=MHV1764667.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004288047.1;locus_tag=AC3ASX_03700;product=transcription elongation factor GreA;protein_id=MHV1764667.1;transl_table=11 JBYLIA010000001.1 Genbank gene 677808 680630 . + . ID=gene-AC3ASX_03705;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=AC3ASX_03705 JBYLIA010000001.1 Protein Homology CDS 677808 680630 . + 0 ID=cds-MHV1764668.1;Parent=gene-AC3ASX_03705;Dbxref=NCBI_GP:MHV1764668.1;Name=MHV1764668.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022039.1;locus_tag=AC3ASX_03705;product=excinuclease ABC subunit UvrA;protein_id=MHV1764668.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 680636 682018 . - . ID=gene-AC3ASX_03710;Name=AC3ASX_03710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03710;pseudo=true JBYLIA010000001.1 Protein Homology CDS 680636 682018 . - 0 ID=cds-AC3ASX_03710;Parent=gene-AC3ASX_03710;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009369895.1;locus_tag=AC3ASX_03710;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 682231 684183 . + . ID=gene-AC3ASX_03715;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;gene_synonym=hflB;locus_tag=AC3ASX_03715 JBYLIA010000001.1 Protein Homology CDS 682231 684183 . + 0 ID=cds-MHV1764669.1;Parent=gene-AC3ASX_03715;Dbxref=NCBI_GP:MHV1764669.1;Name=MHV1764669.1;Ontology_term=GO:0006508,GO:0051301,GO:0004222,GO:0016887,GO:0016020;gbkey=CDS;gene=ftsH;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,ATP hydrolysis activity|0016887||IEA;go_process=proteolysis|0006508||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013923405.1;locus_tag=AC3ASX_03715;product=ATP-dependent zinc metalloprotease FtsH;protein_id=MHV1764669.1;transl_table=11 JBYLIA010000001.1 Genbank gene 684437 685159 . + . ID=gene-AC3ASX_03720;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=AC3ASX_03720 JBYLIA010000001.1 Protein Homology CDS 684437 685159 . + 0 ID=cds-MHV1764670.1;Parent=gene-AC3ASX_03720;Dbxref=NCBI_GP:MHV1764670.1;Name=MHV1764670.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010031353.1;locus_tag=AC3ASX_03720;product=purine-nucleoside phosphorylase;protein_id=MHV1764670.1;transl_table=11 JBYLIA010000001.1 Genbank gene 685175 685606 . - . ID=gene-AC3ASX_03725;Name=AC3ASX_03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03725 JBYLIA010000001.1 Protein Homology CDS 685175 685606 . - 0 ID=cds-MHV1764671.1;Parent=gene-AC3ASX_03725;Dbxref=NCBI_GP:MHV1764671.1;Name=MHV1764671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547930.1;locus_tag=AC3ASX_03725;product=hypothetical protein;protein_id=MHV1764671.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 685609 686394 . - . ID=gene-AC3ASX_03730;Name=AC3ASX_03730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03730;pseudo=true JBYLIA010000001.1 Protein Homology CDS 685609 686394 . - 0 ID=cds-AC3ASX_03730;Parent=gene-AC3ASX_03730;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019347.1;locus_tag=AC3ASX_03730;product=LPP20 family lipoprotein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 686610 689330 . + . ID=gene-AC3ASX_03735;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=AC3ASX_03735 JBYLIA010000001.1 Protein Homology CDS 686610 689330 . + 0 ID=cds-MHV1764672.1;Parent=gene-AC3ASX_03735;Dbxref=NCBI_GP:MHV1764672.1;Name=MHV1764672.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011242256.1;locus_tag=AC3ASX_03735;product=preprotein translocase subunit SecA;protein_id=MHV1764672.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 689454 690024 . + . ID=gene-AC3ASX_03740;Name=AC3ASX_03740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03740;pseudo=true JBYLIA010000001.1 Protein Homology CDS 689454 690024 . + 0 ID=cds-AC3ASX_03740;Parent=gene-AC3ASX_03740;Note=frameshifted%3B internal stop;Ontology_term=GO:0006284,GO:0008725;gbkey=CDS;go_function=DNA-3-methyladenine glycosylase activity|0008725||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547934.1;locus_tag=AC3ASX_03740;product=DNA-3-methyladenine glycosylase I;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 690035 690166 . + . ID=gene-AC3ASX_03745;Name=AC3ASX_03745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03745 JBYLIA010000001.1 GeneMarkS-2+ CDS 690035 690166 . + 0 ID=cds-MHV1764673.1;Parent=gene-AC3ASX_03745;Dbxref=NCBI_GP:MHV1764673.1;Name=MHV1764673.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_03745;product=hypothetical protein;protein_id=MHV1764673.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 690171 690542 . - . ID=gene-AC3ASX_03750;Name=AC3ASX_03750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03750;pseudo=true JBYLIA010000001.1 Protein Homology CDS 690171 690542 . - 0 ID=cds-AC3ASX_03750;Parent=gene-AC3ASX_03750;Note=internal stop;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: protein motif:HMM:NF014634.7;locus_tag=AC3ASX_03750;product=glycerate kinase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 690791 690988 . - . ID=gene-AC3ASX_03755;Name=AC3ASX_03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03755 JBYLIA010000001.1 Protein Homology CDS 690791 690988 . - 0 ID=cds-MHV1764674.1;Parent=gene-AC3ASX_03755;Dbxref=NCBI_GP:MHV1764674.1;Name=MHV1764674.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014634.7;locus_tag=AC3ASX_03755;product=hypothetical protein;protein_id=MHV1764674.1;transl_table=11 JBYLIA010000001.1 Genbank gene 690994 691206 . - . ID=gene-AC3ASX_03760;Name=AC3ASX_03760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03760 JBYLIA010000001.1 Protein Homology CDS 690994 691206 . - 0 ID=cds-MHV1764675.1;Parent=gene-AC3ASX_03760;Dbxref=NCBI_GP:MHV1764675.1;Name=MHV1764675.1;Ontology_term=GO:0031388,GO:0008887;gbkey=CDS;go_function=glycerate kinase activity|0008887||IEA;go_process=organic acid phosphorylation|0031388||IEA;inference=COORDINATES: protein motif:HMM:NF014634.7;locus_tag=AC3ASX_03760;product=glycerate kinase;protein_id=MHV1764675.1;transl_table=11 JBYLIA010000001.1 Genbank gene 691410 691724 . + . ID=gene-AC3ASX_03765;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=AC3ASX_03765 JBYLIA010000001.1 Protein Homology CDS 691410 691724 . + 0 ID=cds-MHV1764676.1;Parent=gene-AC3ASX_03765;Dbxref=NCBI_GP:MHV1764676.1;Name=MHV1764676.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004288036.1;locus_tag=AC3ASX_03765;product=50S ribosomal protein L21;protein_id=MHV1764676.1;transl_table=11 JBYLIA010000001.1 Genbank gene 691755 692009 . + . ID=gene-AC3ASX_03770;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=AC3ASX_03770 JBYLIA010000001.1 Protein Homology CDS 691755 692009 . + 0 ID=cds-MHV1764677.1;Parent=gene-AC3ASX_03770;Dbxref=NCBI_GP:MHV1764677.1;Name=MHV1764677.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004288034.1;locus_tag=AC3ASX_03770;product=50S ribosomal protein L27;protein_id=MHV1764677.1;transl_table=11 JBYLIA010000001.1 Genbank gene 692418 693218 . - . ID=gene-AC3ASX_03775;Name=AC3ASX_03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03775 JBYLIA010000001.1 Protein Homology CDS 692418 693218 . - 0 ID=cds-MHV1764678.1;Parent=gene-AC3ASX_03775;Dbxref=NCBI_GP:MHV1764678.1;Name=MHV1764678.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018300824.1;locus_tag=AC3ASX_03775;product=ABC transporter permease;protein_id=MHV1764678.1;transl_table=11 JBYLIA010000001.1 Genbank gene 693232 694113 . - . ID=gene-AC3ASX_03780;Name=AC3ASX_03780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03780 JBYLIA010000001.1 Protein Homology CDS 693232 694113 . - 0 ID=cds-MHV1764679.1;Parent=gene-AC3ASX_03780;Dbxref=NCBI_GP:MHV1764679.1;Name=MHV1764679.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014715216.1;locus_tag=AC3ASX_03780;product=ABC transporter permease;protein_id=MHV1764679.1;transl_table=11 JBYLIA010000001.1 Genbank gene 694113 695234 . - . ID=gene-AC3ASX_03785;Name=AC3ASX_03785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03785 JBYLIA010000001.1 Protein Homology CDS 694113 695234 . - 0 ID=cds-MHV1764680.1;Parent=gene-AC3ASX_03785;Dbxref=NCBI_GP:MHV1764680.1;Name=MHV1764680.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013923395.1;locus_tag=AC3ASX_03785;product=ABC transporter ATP-binding protein;protein_id=MHV1764680.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 695306 696469 . - . ID=gene-AC3ASX_03790;Name=AC3ASX_03790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03790;pseudo=true JBYLIA010000001.1 Protein Homology CDS 695306 696469 . - 0 ID=cds-AC3ASX_03790;Parent=gene-AC3ASX_03790;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036192.1;locus_tag=AC3ASX_03790;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 696704 697344 . + . ID=gene-AC3ASX_03795;Name=AC3ASX_03795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03795;pseudo=true JBYLIA010000001.1 Protein Homology CDS 696704 697344 . + 0 ID=cds-AC3ASX_03795;Parent=gene-AC3ASX_03795;Note=frameshifted;Ontology_term=GO:0008152,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429683.1;locus_tag=AC3ASX_03795;product=HAD-IB family phosphatase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 697333 698355 . - . ID=gene-AC3ASX_03800;Name=AC3ASX_03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03800 JBYLIA010000001.1 Protein Homology CDS 697333 698355 . - 0 ID=cds-MHV1764681.1;Parent=gene-AC3ASX_03800;Dbxref=NCBI_GP:MHV1764681.1;Name=MHV1764681.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011648729.1;locus_tag=AC3ASX_03800;product=DUF475 domain-containing protein;protein_id=MHV1764681.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 698436 698832 . + . ID=gene-AC3ASX_03805;Name=AC3ASX_03805;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03805;pseudo=true JBYLIA010000001.1 Protein Homology CDS 698436 698832 . + 0 ID=cds-AC3ASX_03805;Parent=gene-AC3ASX_03805;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016552.1;locus_tag=AC3ASX_03805;product=DUF3301 domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 698844 699551 . + . ID=gene-AC3ASX_03810;Name=AC3ASX_03810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03810 JBYLIA010000001.1 Protein Homology CDS 698844 699551 . + 0 ID=cds-MHV1764682.1;Parent=gene-AC3ASX_03810;Dbxref=NCBI_GP:MHV1764682.1;Name=MHV1764682.1;Ontology_term=GO:0043295;gbkey=CDS;go_function=glutathione binding|0043295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016551.1;locus_tag=AC3ASX_03810;product=glutathione S-transferase family protein;protein_id=MHV1764682.1;transl_table=11 JBYLIA010000001.1 Genbank gene 699705 700811 . + . ID=gene-AC3ASX_03815;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=AC3ASX_03815 JBYLIA010000001.1 Protein Homology CDS 699705 700811 . + 0 ID=cds-MHV1764683.1;Parent=gene-AC3ASX_03815;Dbxref=NCBI_GP:MHV1764683.1;Name=MHV1764683.1;Ontology_term=GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012279677.1;locus_tag=AC3ASX_03815;product=alanine racemase;protein_id=MHV1764683.1;transl_table=11 JBYLIA010000001.1 Genbank gene 700886 702496 . + . ID=gene-AC3ASX_03820;Name=AC3ASX_03820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03820 JBYLIA010000001.1 Protein Homology CDS 700886 702496 . + 0 ID=cds-MHV1764684.1;Parent=gene-AC3ASX_03820;Dbxref=NCBI_GP:MHV1764684.1;Name=MHV1764684.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014715223.1;locus_tag=AC3ASX_03820;product=APC family permease;protein_id=MHV1764684.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 702569 703397 . + . ID=gene-AC3ASX_03825;Name=AC3ASX_03825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03825;pseudo=true JBYLIA010000001.1 Protein Homology CDS 702569 703397 . + 0 ID=cds-AC3ASX_03825;Parent=gene-AC3ASX_03825;Note=frameshifted%3B internal stop;Ontology_term=GO:0009094,GO:0004664;gbkey=CDS;go_function=prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429678.1;locus_tag=AC3ASX_03825;product=prephenate dehydratase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 703423 704085 . + . ID=gene-AC3ASX_03830;Name=AC3ASX_03830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03830;pseudo=true JBYLIA010000001.1 Protein Homology CDS 703423 704085 . + 0 ID=cds-AC3ASX_03830;Parent=gene-AC3ASX_03830;Note=frameshifted;Ontology_term=GO:0006508,GO:0008233,GO:0008237,GO:0008270,GO:0016787,GO:0046872;gbkey=CDS;go_function=peptidase activity|0008233||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549641.1;locus_tag=AC3ASX_03830;product=M48 family metallopeptidase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 704142 705515 . + . ID=gene-AC3ASX_03835;Name=AC3ASX_03835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03835 JBYLIA010000001.1 Protein Homology CDS 704142 705515 . + 0 ID=cds-MHV1764685.1;Parent=gene-AC3ASX_03835;Dbxref=NCBI_GP:MHV1764685.1;Name=MHV1764685.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016541.1;locus_tag=AC3ASX_03835;product=L-serine ammonia-lyase;protein_id=MHV1764685.1;transl_table=11 JBYLIA010000001.1 Genbank gene 705617 706840 . + . ID=gene-AC3ASX_03840;Name=AC3ASX_03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03840 JBYLIA010000001.1 Protein Homology CDS 705617 706840 . + 0 ID=cds-MHV1764686.1;Parent=gene-AC3ASX_03840;Dbxref=NCBI_GP:MHV1764686.1;Name=MHV1764686.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=obsolete cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016540.1;locus_tag=AC3ASX_03840;product=aminotransferase class V-fold PLP-dependent enzyme;protein_id=MHV1764686.1;transl_table=11 JBYLIA010000001.1 Genbank gene 706861 707217 . + . ID=gene-AC3ASX_03845;Name=AC3ASX_03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03845 JBYLIA010000001.1 Protein Homology CDS 706861 707217 . + 0 ID=cds-MHV1764687.1;Parent=gene-AC3ASX_03845;Dbxref=NCBI_GP:MHV1764687.1;Name=MHV1764687.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016538.1;locus_tag=AC3ASX_03845;product=HesB/IscA family protein;protein_id=MHV1764687.1;transl_table=11 JBYLIA010000001.1 Genbank gene 707230 707781 . + . ID=gene-AC3ASX_03850;Name=sufT;gbkey=Gene;gene=sufT;gene_biotype=protein_coding;locus_tag=AC3ASX_03850 JBYLIA010000001.1 Protein Homology CDS 707230 707781 . + 0 ID=cds-MHV1764688.1;Parent=gene-AC3ASX_03850;Dbxref=NCBI_GP:MHV1764688.1;Name=MHV1764688.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufT;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038939.1;locus_tag=AC3ASX_03850;product=putative Fe-S cluster assembly protein SufT;protein_id=MHV1764688.1;transl_table=11 JBYLIA010000001.1 Genbank gene 707793 708281 . + . ID=gene-AC3ASX_03855;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=AC3ASX_03855 JBYLIA010000001.1 Protein Homology CDS 707793 708281 . + 0 ID=cds-MHV1764689.1;Parent=gene-AC3ASX_03855;Dbxref=NCBI_GP:MHV1764689.1;Name=MHV1764689.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548424.1;locus_tag=AC3ASX_03855;product=pantetheine-phosphate adenylyltransferase;protein_id=MHV1764689.1;transl_table=11 JBYLIA010000001.1 Genbank gene 708287 708532 . + . ID=gene-AC3ASX_03860;Name=AC3ASX_03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03860 JBYLIA010000001.1 Protein Homology CDS 708287 708532 . + 0 ID=cds-MHV1764690.1;Parent=gene-AC3ASX_03860;Dbxref=NCBI_GP:MHV1764690.1;Name=MHV1764690.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003042175.1;locus_tag=AC3ASX_03860;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=MHV1764690.1;transl_table=11 JBYLIA010000001.1 Genbank gene 708631 709809 . + . ID=gene-AC3ASX_03865;Name=AC3ASX_03865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03865 JBYLIA010000001.1 Protein Homology CDS 708631 709809 . + 0 ID=cds-MHV1764691.1;Parent=gene-AC3ASX_03865;Dbxref=NCBI_GP:MHV1764691.1;Name=MHV1764691.1;Ontology_term=GO:0015288,GO:0042834,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004288008.1;locus_tag=AC3ASX_03865;product=OmpA family protein;protein_id=MHV1764691.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 710612 711840 . - . ID=gene-AC3ASX_03870;Name=AC3ASX_03870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03870;pseudo=true JBYLIA010000001.1 Protein Homology CDS 710612 711840 . - 0 ID=cds-AC3ASX_03870;Parent=gene-AC3ASX_03870;Note=frameshifted%3B internal stop;Ontology_term=GO:0015628,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015401.1;locus_tag=AC3ASX_03870;product=type II secretion system F family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 711860 712408 . - . ID=gene-AC3ASX_03875;Name=AC3ASX_03875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03875;pseudo=true JBYLIA010000001.1 Protein Homology CDS 711860 712408 . - 0 ID=cds-AC3ASX_03875;Parent=gene-AC3ASX_03875;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012652.7;locus_tag=AC3ASX_03875;product=ATPase%2C T2SS/T4P/T4SS family;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 712410 712550 . - . ID=gene-AC3ASX_03880;Name=AC3ASX_03880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03880 JBYLIA010000001.1 Protein Homology CDS 712410 712550 . - 0 ID=cds-MHV1764692.1;Parent=gene-AC3ASX_03880;Dbxref=NCBI_GP:MHV1764692.1;Name=MHV1764692.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012652.7;locus_tag=AC3ASX_03880;product=ATPase%2C T2SS/T4P/T4SS family;protein_id=MHV1764692.1;transl_table=11 JBYLIA010000001.1 Genbank gene 712586 712654 . - . ID=gene-AC3ASX_03885;Name=AC3ASX_03885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03885 JBYLIA010000001.1 Protein Homology CDS 712586 712654 . - 0 ID=cds-MHV1764693.1;Parent=gene-AC3ASX_03885;Dbxref=NCBI_GP:MHV1764693.1;Name=MHV1764693.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012652.7;locus_tag=AC3ASX_03885;product=ATPase%2C T2SS/T4P/T4SS family;protein_id=MHV1764693.1;transl_table=11 JBYLIA010000001.1 Genbank gene 712800 712955 . - . ID=gene-AC3ASX_03890;Name=AC3ASX_03890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03890 JBYLIA010000001.1 Protein Homology CDS 712800 712955 . - 0 ID=cds-MHV1764694.1;Parent=gene-AC3ASX_03890;Dbxref=NCBI_GP:MHV1764694.1;Name=MHV1764694.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012652.7;locus_tag=AC3ASX_03890;product=ATPase%2C T2SS/T4P/T4SS family;protein_id=MHV1764694.1;transl_table=11 JBYLIA010000001.1 Genbank gene 713170 713562 . - . ID=gene-AC3ASX_03895;Name=AC3ASX_03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03895 JBYLIA010000001.1 Protein Homology CDS 713170 713562 . - 0 ID=cds-MHV1764695.1;Parent=gene-AC3ASX_03895;Dbxref=NCBI_GP:MHV1764695.1;Name=MHV1764695.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017009.7;locus_tag=AC3ASX_03895;product=GspE/PulE/PilB domain-containing protein;protein_id=MHV1764695.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 713719 714472 . + . ID=gene-AC3ASX_03900;Name=AC3ASX_03900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03900;pseudo=true JBYLIA010000001.1 Protein Homology CDS 713719 714472 . + 0 ID=cds-AC3ASX_03900;Parent=gene-AC3ASX_03900;Note=frameshifted;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021321.1;locus_tag=AC3ASX_03900;product=glycerophosphodiester phosphodiesterase family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 714467 714768 . - . ID=gene-AC3ASX_03905;Name=AC3ASX_03905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03905;pseudo=true JBYLIA010000001.1 Protein Homology CDS 714467 714768 . - 0 ID=cds-AC3ASX_03905;Parent=gene-AC3ASX_03905;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015406.1;locus_tag=AC3ASX_03905;product=competence/damage-inducible protein A;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 714909 715388 . - . ID=gene-AC3ASX_03910;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=AC3ASX_03910 JBYLIA010000001.1 Protein Homology CDS 714909 715388 . - 0 ID=cds-MHV1764696.1;Parent=gene-AC3ASX_03910;Dbxref=NCBI_GP:MHV1764696.1;Name=MHV1764696.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280829.1;locus_tag=AC3ASX_03910;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=MHV1764696.1;transl_table=11 JBYLIA010000001.1 Genbank gene 715401 716150 . - . ID=gene-AC3ASX_03915;Name=AC3ASX_03915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03915 JBYLIA010000001.1 Protein Homology CDS 715401 716150 . - 0 ID=cds-MHV1764697.1;Parent=gene-AC3ASX_03915;Dbxref=NCBI_GP:MHV1764697.1;Name=MHV1764697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026367.1;locus_tag=AC3ASX_03915;product=rhodanese-like domain-containing protein;protein_id=MHV1764697.1;transl_table=11 JBYLIA010000001.1 Genbank gene 716225 717436 . - . ID=gene-AC3ASX_03920;Name=AC3ASX_03920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03920 JBYLIA010000001.1 Protein Homology CDS 716225 717436 . - 0 ID=cds-MHV1764698.1;Parent=gene-AC3ASX_03920;Dbxref=NCBI_GP:MHV1764698.1;Name=MHV1764698.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021306.1;locus_tag=AC3ASX_03920;product=amino acid permease;protein_id=MHV1764698.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 717519 718513 . - . ID=gene-AC3ASX_03925;Name=AC3ASX_03925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03925;pseudo=true JBYLIA010000001.1 Protein Homology CDS 717519 718513 . - 0 ID=cds-AC3ASX_03925;Parent=gene-AC3ASX_03925;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026362.1;locus_tag=AC3ASX_03925;product=MetQ/NlpA family lipoprotein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 718507 719185 . - . ID=gene-AC3ASX_03930;Name=AC3ASX_03930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03930;pseudo=true JBYLIA010000001.1 Protein Homology CDS 718507 719185 . - 0 ID=cds-AC3ASX_03930;Parent=gene-AC3ASX_03930;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0048473,GO:0005524,GO:0016887,GO:0033232,GO:0042626;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type D-methionine transporter activity|0033232||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021300.1;locus_tag=AC3ASX_03930;product=methionine ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 719181 719795 . - . ID=gene-AC3ASX_03935;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=AC3ASX_03935 JBYLIA010000001.1 Protein Homology CDS 719181 719795 . - 0 ID=cds-MHV1764699.1;Parent=gene-AC3ASX_03935;Dbxref=NCBI_GP:MHV1764699.1;Name=MHV1764699.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011648637.1;locus_tag=AC3ASX_03935;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=MHV1764699.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 719950 721054 . + . ID=gene-AC3ASX_03940;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=pseudogene;locus_tag=AC3ASX_03940;pseudo=true JBYLIA010000001.1 Protein Homology CDS 719950 721054 . + 0 ID=cds-AC3ASX_03940;Parent=gene-AC3ASX_03940;Note=frameshifted;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015439.1;locus_tag=AC3ASX_03940;product=tRNA guanosine(34) transglycosylase Tgt;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 721312 721500 . - . ID=gene-AC3ASX_03945;Name=AC3ASX_03945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03945 JBYLIA010000001.1 GeneMarkS-2+ CDS 721312 721500 . - 0 ID=cds-MHV1764700.1;Parent=gene-AC3ASX_03945;Dbxref=NCBI_GP:MHV1764700.1;Name=MHV1764700.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_03945;product=hypothetical protein;protein_id=MHV1764700.1;transl_table=11 JBYLIA010000001.1 Genbank gene 721777 721890 . - . ID=gene-AC3ASX_03950;Name=AC3ASX_03950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03950 JBYLIA010000001.1 Protein Homology CDS 721777 721890 . - 0 ID=cds-MHV1764701.1;Parent=gene-AC3ASX_03950;Dbxref=NCBI_GP:MHV1764701.1;Name=MHV1764701.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF012354.7;locus_tag=AC3ASX_03950;product=helix-turn-helix domain-containing protein;protein_id=MHV1764701.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 722049 722920 . + . ID=gene-AC3ASX_03955;Name=AC3ASX_03955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03955;pseudo=true JBYLIA010000001.1 Protein Homology CDS 722049 722920 . + 0 ID=cds-AC3ASX_03955;Parent=gene-AC3ASX_03955;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021284.1;locus_tag=AC3ASX_03955;product=DMT family transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 722934 723516 . + . ID=gene-AC3ASX_03960;Name=AC3ASX_03960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_03960;pseudo=true JBYLIA010000001.1 Protein Homology CDS 722934 723516 . + 0 ID=cds-AC3ASX_03960;Parent=gene-AC3ASX_03960;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548085.1;locus_tag=AC3ASX_03960;product=cysteine hydrolase family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 723609 723821 . + . ID=gene-AC3ASX_03965;Name=AC3ASX_03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03965 JBYLIA010000001.1 Protein Homology CDS 723609 723821 . + 0 ID=cds-MHV1764702.1;Parent=gene-AC3ASX_03965;Dbxref=NCBI_GP:MHV1764702.1;Name=MHV1764702.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339459.1;locus_tag=AC3ASX_03965;product=hypothetical protein;protein_id=MHV1764702.1;transl_table=11 JBYLIA010000001.1 Genbank gene 724043 724399 . + . ID=gene-AC3ASX_03970;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=AC3ASX_03970 JBYLIA010000001.1 Protein Homology CDS 724043 724399 . + 0 ID=cds-MHV1764703.1;Parent=gene-AC3ASX_03970;Dbxref=NCBI_GP:MHV1764703.1;Name=MHV1764703.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011457427.1;locus_tag=AC3ASX_03970;product=preprotein translocase subunit YajC;protein_id=MHV1764703.1;transl_table=11 JBYLIA010000001.1 Genbank gene 724453 726390 . + . ID=gene-AC3ASX_03975;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=AC3ASX_03975 JBYLIA010000001.1 Protein Homology CDS 724453 726390 . + 0 ID=cds-MHV1764704.1;Parent=gene-AC3ASX_03975;Dbxref=NCBI_GP:MHV1764704.1;Name=MHV1764704.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548088.1;locus_tag=AC3ASX_03975;product=protein translocase subunit SecD;protein_id=MHV1764704.1;transl_table=11 JBYLIA010000001.1 Genbank gene 726409 727353 . + . ID=gene-AC3ASX_03980;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=AC3ASX_03980 JBYLIA010000001.1 Protein Homology CDS 726409 727353 . + 0 ID=cds-MHV1764705.1;Parent=gene-AC3ASX_03980;Dbxref=NCBI_GP:MHV1764705.1;Name=MHV1764705.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429687.1;locus_tag=AC3ASX_03980;product=protein translocase subunit SecF;protein_id=MHV1764705.1;transl_table=11 JBYLIA010000001.1 Genbank gene 727423 727809 . + . ID=gene-AC3ASX_03985;Name=AC3ASX_03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_03985 JBYLIA010000001.1 Protein Homology CDS 727423 727809 . + 0 ID=cds-MHV1764706.1;Parent=gene-AC3ASX_03985;Dbxref=NCBI_GP:MHV1764706.1;Name=MHV1764706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011733680.1;locus_tag=AC3ASX_03985;product=hypothetical protein;protein_id=MHV1764706.1;transl_table=11 JBYLIA010000001.1 Genbank gene 727819 728697 . + . ID=gene-AC3ASX_03990;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=AC3ASX_03990 JBYLIA010000001.1 Protein Homology CDS 727819 728697 . + 0 ID=cds-MHV1764707.1;Parent=gene-AC3ASX_03990;Dbxref=NCBI_GP:MHV1764707.1;Name=MHV1764707.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339454.1;locus_tag=AC3ASX_03990;product=RNA polymerase sigma factor RpoH;protein_id=MHV1764707.1;transl_table=11 JBYLIA010000001.1 Genbank gene 728786 730063 . + . ID=gene-AC3ASX_03995;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=AC3ASX_03995 JBYLIA010000001.1 Protein Homology CDS 728786 730063 . + 0 ID=cds-MHV1764708.1;Parent=gene-AC3ASX_03995;Dbxref=NCBI_GP:MHV1764708.1;Name=MHV1764708.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015460.1;locus_tag=AC3ASX_03995;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=MHV1764708.1;transl_table=11 JBYLIA010000001.1 Genbank gene 730066 730656 . + . ID=gene-AC3ASX_04000;Name=AC3ASX_04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04000 JBYLIA010000001.1 Protein Homology CDS 730066 730656 . + 0 ID=cds-MHV1764709.1;Parent=gene-AC3ASX_04000;Dbxref=NCBI_GP:MHV1764709.1;Name=MHV1764709.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548093.1;locus_tag=AC3ASX_04000;product=class I SAM-dependent methyltransferase;protein_id=MHV1764709.1;transl_table=11 JBYLIA010000001.1 Genbank gene 730631 731089 . + . ID=gene-AC3ASX_04005;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=AC3ASX_04005 JBYLIA010000001.1 Protein Homology CDS 730631 731089 . + 0 ID=cds-MHV1764710.1;Parent=gene-AC3ASX_04005;Dbxref=NCBI_GP:MHV1764710.1;Name=MHV1764710.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015471.1;locus_tag=AC3ASX_04005;product=ribonuclease HI;protein_id=MHV1764710.1;transl_table=11 JBYLIA010000001.1 Genbank gene 731091 732134 . + . ID=gene-AC3ASX_04010;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=AC3ASX_04010 JBYLIA010000001.1 Protein Homology CDS 731091 732134 . + 0 ID=cds-MHV1764711.1;Parent=gene-AC3ASX_04010;Dbxref=NCBI_GP:MHV1764711.1;Name=MHV1764711.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280849.1;locus_tag=AC3ASX_04010;product=asparaginase;protein_id=MHV1764711.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 732185 732889 . + . ID=gene-AC3ASX_04015;Name=AC3ASX_04015;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04015;pseudo=true JBYLIA010000001.1 Protein Homology CDS 732185 732889 . + 0 ID=cds-AC3ASX_04015;Parent=gene-AC3ASX_04015;Note=internal stop;Ontology_term=GO:0004089,GO:0008270;gbkey=CDS;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014715258.1;locus_tag=AC3ASX_04015;product=carbonic anhydrase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 732964 734735 . - . ID=gene-AC3ASX_04020;Name=AC3ASX_04020;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04020;pseudo=true JBYLIA010000001.1 Protein Homology CDS 732964 734735 . - 0 ID=cds-AC3ASX_04020;Parent=gene-AC3ASX_04020;Note=frameshifted%3B internal stop;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549945.1;locus_tag=AC3ASX_04020;product=tetratricopeptide repeat protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 734812 735669 . - . ID=gene-AC3ASX_04025;Name=ylqF;gbkey=Gene;gene=ylqF;gene_biotype=protein_coding;locus_tag=AC3ASX_04025 JBYLIA010000001.1 Protein Homology CDS 734812 735669 . - 0 ID=cds-MHV1764712.1;Parent=gene-AC3ASX_04025;Dbxref=NCBI_GP:MHV1764712.1;Name=MHV1764712.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=ylqF;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034271.1;locus_tag=AC3ASX_04025;product=ribosome biogenesis GTPase YlqF;protein_id=MHV1764712.1;transl_table=11 JBYLIA010000001.1 Genbank gene 735732 736865 . + . ID=gene-AC3ASX_04030;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=AC3ASX_04030 JBYLIA010000001.1 Protein Homology CDS 735732 736865 . + 0 ID=cds-MHV1764713.1;Parent=gene-AC3ASX_04030;Dbxref=NCBI_GP:MHV1764713.1;Name=MHV1764713.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003039827.1;locus_tag=AC3ASX_04030;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=MHV1764713.1;transl_table=11 JBYLIA010000001.1 Genbank gene 736869 737507 . + . ID=gene-AC3ASX_04035;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=AC3ASX_04035 JBYLIA010000001.1 Protein Homology CDS 736869 737507 . + 0 ID=cds-MHV1764714.1;Parent=gene-AC3ASX_04035;Dbxref=NCBI_GP:MHV1764714.1;Name=MHV1764714.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036913.1;locus_tag=AC3ASX_04035;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=MHV1764714.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 737526 738320 . + . ID=gene-AC3ASX_04040;Name=AC3ASX_04040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04040;pseudo=true JBYLIA010000001.1 Protein Homology CDS 737526 738320 . + 0 ID=cds-AC3ASX_04040;Parent=gene-AC3ASX_04040;Note=frameshifted%3B internal stop;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=L-glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010032890.1;locus_tag=AC3ASX_04040;product=class II glutamine amidotransferase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 738330 739520 . + . ID=gene-AC3ASX_04045;Name=AC3ASX_04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04045 JBYLIA010000001.1 Protein Homology CDS 738330 739520 . + 0 ID=cds-MHV1764715.1;Parent=gene-AC3ASX_04045;Dbxref=NCBI_GP:MHV1764715.1;Name=MHV1764715.1;Ontology_term=GO:0009058,GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287907.1;locus_tag=AC3ASX_04045;product=pyridoxal phosphate-dependent aminotransferase;protein_id=MHV1764715.1;transl_table=11 JBYLIA010000001.1 Genbank gene 739619 740512 . + . ID=gene-AC3ASX_04050;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=AC3ASX_04050 JBYLIA010000001.1 Protein Homology CDS 739619 740512 . + 0 ID=cds-MHV1764716.1;Parent=gene-AC3ASX_04050;Dbxref=NCBI_GP:MHV1764716.1;Name=MHV1764716.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012279576.1;locus_tag=AC3ASX_04050;product=GTPase Era;protein_id=MHV1764716.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 740527 740944 . + . ID=gene-AC3ASX_04055;Name=AC3ASX_04055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04055;pseudo=true JBYLIA010000001.1 Protein Homology CDS 740527 740944 . + 0 ID=cds-AC3ASX_04055;Parent=gene-AC3ASX_04055;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548475.1;locus_tag=AC3ASX_04055;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 741108 741413 . + . ID=gene-AC3ASX_04060;Name=AC3ASX_04060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04060 JBYLIA010000001.1 Protein Homology CDS 741108 741413 . + 0 ID=cds-MHV1764717.1;Parent=gene-AC3ASX_04060;Dbxref=NCBI_GP:MHV1764717.1;Name=MHV1764717.1;Ontology_term=GO:0050660;gbkey=CDS;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: protein motif:HMM:NF013714.7;locus_tag=AC3ASX_04060;product=FAD-binding protein;protein_id=MHV1764717.1;transl_table=11 JBYLIA010000001.1 Genbank gene 741730 742251 . + . ID=gene-AC3ASX_04065;Name=AC3ASX_04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04065 JBYLIA010000001.1 GeneMarkS-2+ CDS 741730 742251 . + 0 ID=cds-MHV1764718.1;Parent=gene-AC3ASX_04065;Dbxref=NCBI_GP:MHV1764718.1;Name=MHV1764718.1;Ontology_term=GO:0003824,GO:0050660;gbkey=CDS;go_function=catalytic activity|0003824||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04065;product=FAD-linked oxidase C-terminal domain-containing protein;protein_id=MHV1764718.1;transl_table=11 JBYLIA010000001.1 Genbank gene 742397 742477 . + . ID=gene-AC3ASX_04070;Name=AC3ASX_04070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04070 JBYLIA010000001.1 Protein Homology CDS 742397 742477 . + 0 ID=cds-MHV1764719.1;Parent=gene-AC3ASX_04070;Dbxref=NCBI_GP:MHV1764719.1;Name=MHV1764719.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014910.7;locus_tag=AC3ASX_04070;product=hypothetical protein;protein_id=MHV1764719.1;transl_table=11 JBYLIA010000001.1 Genbank gene 742577 742885 . + . ID=gene-AC3ASX_04075;Name=AC3ASX_04075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04075 JBYLIA010000001.1 Protein Homology CDS 742577 742885 . + 0 ID=cds-MHV1764720.1;Parent=gene-AC3ASX_04075;Dbxref=NCBI_GP:MHV1764720.1;Name=MHV1764720.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024581.7;locus_tag=AC3ASX_04075;product=4Fe-4S dicluster domain-containing protein;protein_id=MHV1764720.1;transl_table=11 JBYLIA010000001.1 Genbank gene 743151 743801 . - . ID=gene-AC3ASX_04080;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=AC3ASX_04080 JBYLIA010000001.1 Protein Homology CDS 743151 743801 . - 0 ID=cds-MHV1764721.1;Parent=gene-AC3ASX_04080;Dbxref=NCBI_GP:MHV1764721.1;Name=MHV1764721.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=AMP kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548473.1;locus_tag=AC3ASX_04080;product=adenylate kinase;protein_id=MHV1764721.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 743927 744932 . + . ID=gene-AC3ASX_04085;Name=AC3ASX_04085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04085;pseudo=true JBYLIA010000001.1 Protein Homology CDS 743927 744932 . + 0 ID=cds-AC3ASX_04085;Parent=gene-AC3ASX_04085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018616.1;locus_tag=AC3ASX_04085;product=type IV pili;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 744934 745497 . + . ID=gene-AC3ASX_04090;Name=AC3ASX_04090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04090;pseudo=true JBYLIA010000001.1 Protein Homology CDS 744934 745497 . + 0 ID=cds-AC3ASX_04090;Parent=gene-AC3ASX_04090;Note=frameshifted;Ontology_term=GO:0043107,GO:0043683;gbkey=CDS;go_process=type IV pilus-dependent motility|0043107||IEA,type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018618.1;locus_tag=AC3ASX_04090;product=PilN domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 745491 746097 . + . ID=gene-AC3ASX_04095;Name=AC3ASX_04095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04095;pseudo=true JBYLIA010000001.1 Protein Homology CDS 745491 746097 . + 0 ID=cds-AC3ASX_04095;Parent=gene-AC3ASX_04095;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009369799.1;locus_tag=AC3ASX_04095;product=type IV pilus inner membrane component PilO;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 746124 746684 . + . ID=gene-AC3ASX_04100;Name=AC3ASX_04100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04100;pseudo=true JBYLIA010000001.1 Protein Homology CDS 746124 746684 . + 0 ID=cds-AC3ASX_04100;Parent=gene-AC3ASX_04100;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015349.1;locus_tag=AC3ASX_04100;product=pilus assembly protein PilP;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 746699 748450 . + . ID=gene-AC3ASX_04105;Name=pilQ;gbkey=Gene;gene=pilQ;gene_biotype=pseudogene;locus_tag=AC3ASX_04105;pseudo=true JBYLIA010000001.1 Protein Homology CDS 746699 748450 . + 0 ID=cds-AC3ASX_04105;Parent=gene-AC3ASX_04105;Note=frameshifted%3B internal stop;Ontology_term=GO:0009297,GO:0009306;gbkey=CDS;gene=pilQ;go_process=pilus assembly|0009297||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036898.1;locus_tag=AC3ASX_04105;product=type IV pilus secretin PilQ;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 748575 749105 . + . ID=gene-AC3ASX_04110;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=AC3ASX_04110 JBYLIA010000001.1 Protein Homology CDS 748575 749105 . + 0 ID=cds-MHV1764722.1;Parent=gene-AC3ASX_04110;Dbxref=NCBI_GP:MHV1764722.1;Name=MHV1764722.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015352.1;locus_tag=AC3ASX_04110;product=shikimate kinase AroK;protein_id=MHV1764722.1;transl_table=11 JBYLIA010000001.1 Genbank gene 749102 750184 . + . ID=gene-AC3ASX_04115;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=AC3ASX_04115 JBYLIA010000001.1 Protein Homology CDS 749102 750184 . + 0 ID=cds-MHV1764723.1;Parent=gene-AC3ASX_04115;Dbxref=NCBI_GP:MHV1764723.1;Name=MHV1764723.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034248.1;locus_tag=AC3ASX_04115;product=3-dehydroquinate synthase;protein_id=MHV1764723.1;transl_table=11 JBYLIA010000001.1 Genbank gene 750365 750748 . - . ID=gene-AC3ASX_04120;Name=AC3ASX_04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04120 JBYLIA010000001.1 Protein Homology CDS 750365 750748 . - 0 ID=cds-MHV1764724.1;Parent=gene-AC3ASX_04120;Dbxref=NCBI_GP:MHV1764724.1;Name=MHV1764724.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015357.1;locus_tag=AC3ASX_04120;product=kinesin;protein_id=MHV1764724.1;transl_table=11 JBYLIA010000001.1 Genbank gene 750963 751250 . + . ID=gene-AC3ASX_04125;Name=AC3ASX_04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04125 JBYLIA010000001.1 Protein Homology CDS 750963 751250 . + 0 ID=cds-MHV1764725.1;Parent=gene-AC3ASX_04125;Dbxref=NCBI_GP:MHV1764725.1;Name=MHV1764725.1;Ontology_term=GO:0006099,GO:0006105,GO:0022900,GO:0034552;gbkey=CDS;go_process=tricarboxylic acid cycle|0006099||IEA,succinate metabolic process|0006105||IEA,electron transport chain|0022900||IEA,respiratory chain complex II assembly|0034552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018632.1;locus_tag=AC3ASX_04125;product=FAD assembly factor SdhE;protein_id=MHV1764725.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 751267 755332 . + . ID=gene-AC3ASX_04130;Name=putA;gbkey=Gene;gene=putA;gene_biotype=pseudogene;locus_tag=AC3ASX_04130;pseudo=true JBYLIA010000001.1 Protein Homology CDS 751267 755332 . + 0 ID=cds-AC3ASX_04130;Parent=gene-AC3ASX_04130;Note=frameshifted%3B internal stop;Ontology_term=GO:0006355,GO:0006562,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,L-glutamate gamma-semialdehyde dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-proline catabolic process|0006562||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429456.1;locus_tag=AC3ASX_04130;product=bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 755500 756978 . + . ID=gene-AC3ASX_04135;Name=AC3ASX_04135;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04135;pseudo=true JBYLIA010000001.1 Protein Homology CDS 755500 756978 . + 0 ID=cds-AC3ASX_04135;Parent=gene-AC3ASX_04135;Note=frameshifted%3B internal stop;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287891.1;locus_tag=AC3ASX_04135;product=APC family permease;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 757053 758232 . + . ID=gene-AC3ASX_04140;Name=AC3ASX_04140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04140;pseudo=true JBYLIA010000001.1 Protein Homology CDS 757053 758232 . + 0 ID=cds-AC3ASX_04140;Parent=gene-AC3ASX_04140;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034243.1;locus_tag=AC3ASX_04140;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 758245 759420 . + . ID=gene-AC3ASX_04145;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=AC3ASX_04145 JBYLIA010000001.1 Protein Homology CDS 758245 759420 . + 0 ID=cds-MHV1764726.1;Parent=gene-AC3ASX_04145;Dbxref=NCBI_GP:MHV1764726.1;Name=MHV1764726.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003039781.1;locus_tag=AC3ASX_04145;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=MHV1764726.1;transl_table=11 JBYLIA010000001.1 Genbank gene 759417 759662 . + . ID=gene-AC3ASX_04150;Name=AC3ASX_04150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04150 JBYLIA010000001.1 GeneMarkS-2+ CDS 759417 759662 . + 0 ID=cds-MHV1764727.1;Parent=gene-AC3ASX_04150;Dbxref=NCBI_GP:MHV1764727.1;Name=MHV1764727.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04150;product=hypothetical protein;protein_id=MHV1764727.1;transl_table=11 JBYLIA010000001.1 Genbank gene 759635 760003 . + . ID=gene-AC3ASX_04155;Name=AC3ASX_04155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04155 JBYLIA010000001.1 Protein Homology CDS 759635 760003 . + 0 ID=cds-MHV1764728.1;Parent=gene-AC3ASX_04155;Dbxref=NCBI_GP:MHV1764728.1;Name=MHV1764728.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: protein motif:HMM:NF013431.7;locus_tag=AC3ASX_04155;product=aldose epimerase family protein;protein_id=MHV1764728.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 760490 760682 . - . ID=gene-AC3ASX_04160;Name=AC3ASX_04160;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04160;pseudo=true JBYLIA010000001.1 Protein Homology CDS 760490 760682 . - 0 ID=cds-AC3ASX_04160;Parent=gene-AC3ASX_04160;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015371.1;locus_tag=AC3ASX_04160;product=ChaB family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 760743 760865 . - . ID=gene-AC3ASX_04165;Name=AC3ASX_04165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04165 JBYLIA010000001.1 GeneMarkS-2+ CDS 760743 760865 . - 0 ID=cds-MHV1764729.1;Parent=gene-AC3ASX_04165;Dbxref=NCBI_GP:MHV1764729.1;Name=MHV1764729.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04165;product=hypothetical protein;protein_id=MHV1764729.1;transl_table=11 JBYLIA010000001.1 Genbank gene 760940 761209 . - . ID=gene-AC3ASX_04170;Name=AC3ASX_04170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04170 JBYLIA010000001.1 Protein Homology CDS 760940 761209 . - 0 ID=cds-MHV1764730.1;Parent=gene-AC3ASX_04170;Dbxref=NCBI_GP:MHV1764730.1;Name=MHV1764730.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024950.7;locus_tag=AC3ASX_04170;product=SDR family oxidoreductase;protein_id=MHV1764730.1;transl_table=11 JBYLIA010000001.1 Genbank gene 761358 761495 . - . ID=gene-AC3ASX_04175;Name=AC3ASX_04175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04175 JBYLIA010000001.1 GeneMarkS-2+ CDS 761358 761495 . - 0 ID=cds-MHV1764731.1;Parent=gene-AC3ASX_04175;Dbxref=NCBI_GP:MHV1764731.1;Name=MHV1764731.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04175;product=hypothetical protein;protein_id=MHV1764731.1;transl_table=11 JBYLIA010000001.1 Genbank gene 761853 762038 . - . ID=gene-AC3ASX_04180;Name=AC3ASX_04180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04180 JBYLIA010000001.1 GeneMarkS-2+ CDS 761853 762038 . - 0 ID=cds-MHV1764732.1;Parent=gene-AC3ASX_04180;Dbxref=NCBI_GP:MHV1764732.1;Name=MHV1764732.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04180;product=hypothetical protein;protein_id=MHV1764732.1;transl_table=11 JBYLIA010000001.1 Genbank gene 762395 762529 . + . ID=gene-AC3ASX_04185;Name=AC3ASX_04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04185 JBYLIA010000001.1 Protein Homology CDS 762395 762529 . + 0 ID=cds-MHV1764733.1;Parent=gene-AC3ASX_04185;Dbxref=NCBI_GP:MHV1764733.1;Name=MHV1764733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026390.1;locus_tag=AC3ASX_04185;product=hypothetical protein;protein_id=MHV1764733.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 762656 764041 . - . ID=gene-AC3ASX_04190;Name=AC3ASX_04190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04190;pseudo=true JBYLIA010000001.1 Protein Homology CDS 762656 764041 . - 0 ID=cds-AC3ASX_04190;Parent=gene-AC3ASX_04190;Note=frameshifted%3B internal stop;Ontology_term=GO:0006281,GO:0003677,GO:0003913,GO:0050660;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA photolyase activity|0003913||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026388.1;locus_tag=AC3ASX_04190;product=cryptochrome/photolyase family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 764001 765038 . - . ID=gene-AC3ASX_04195;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=AC3ASX_04195 JBYLIA010000001.1 Protein Homology CDS 764001 765038 . - 0 ID=cds-MHV1764734.1;Parent=gene-AC3ASX_04195;Dbxref=NCBI_GP:MHV1764734.1;Name=MHV1764734.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=protoporphyrin ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013923009.1;locus_tag=AC3ASX_04195;product=ferrochelatase;protein_id=MHV1764734.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 765235 765432 . + . ID=gene-AC3ASX_04200;Name=AC3ASX_04200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04200;pseudo=true JBYLIA010000001.1 Protein Homology CDS 765235 765432 . + 0 ID=cds-AC3ASX_04200;Parent=gene-AC3ASX_04200;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026382.1;locus_tag=AC3ASX_04200;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 765432 765788 . + . ID=gene-AC3ASX_04205;Name=AC3ASX_04205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04205;pseudo=true JBYLIA010000001.1 Protein Homology CDS 765432 765788 . + 0 ID=cds-AC3ASX_04205;Parent=gene-AC3ASX_04205;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026380.1;locus_tag=AC3ASX_04205;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 765858 765989 . + . ID=gene-AC3ASX_04210;Name=AC3ASX_04210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04210 JBYLIA010000001.1 GeneMarkS-2+ CDS 765858 765989 . + 0 ID=cds-MHV1764735.1;Parent=gene-AC3ASX_04210;Dbxref=NCBI_GP:MHV1764735.1;Name=MHV1764735.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04210;product=hypothetical protein;protein_id=MHV1764735.1;transl_table=11 JBYLIA010000001.1 Genbank gene 765976 766236 . + . ID=gene-AC3ASX_04215;Name=AC3ASX_04215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04215 JBYLIA010000001.1 GeneMarkS-2+ CDS 765976 766236 . + 0 ID=cds-MHV1764736.1;Parent=gene-AC3ASX_04215;Dbxref=NCBI_GP:MHV1764736.1;Name=MHV1764736.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04215;product=hypothetical protein;protein_id=MHV1764736.1;transl_table=11 JBYLIA010000001.1 Genbank gene 766305 766442 . + . ID=gene-AC3ASX_04220;Name=AC3ASX_04220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04220 JBYLIA010000001.1 GeneMarkS-2+ CDS 766305 766442 . + 0 ID=cds-MHV1764737.1;Parent=gene-AC3ASX_04220;Dbxref=NCBI_GP:MHV1764737.1;Name=MHV1764737.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04220;product=hypothetical protein;protein_id=MHV1764737.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 767204 767771 . + . ID=gene-AC3ASX_04225;Name=AC3ASX_04225;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04225;pseudo=true JBYLIA010000001.1 Protein Homology CDS 767204 767771 . + 0 ID=cds-AC3ASX_04225;Parent=gene-AC3ASX_04225;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008033,GO:0016491,GO:0017150,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429621.1;locus_tag=AC3ASX_04225;product=tRNA dihydrouridine synthase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 767794 768627 . - . ID=gene-AC3ASX_04230;Name=AC3ASX_04230;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04230;pseudo=true JBYLIA010000001.1 Protein Homology CDS 767794 768627 . - 0 ID=cds-AC3ASX_04230;Parent=gene-AC3ASX_04230;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006281;gbkey=CDS;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018886.1;locus_tag=AC3ASX_04230;product=Y-family DNA polymerase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 769124 769291 . + . ID=gene-AC3ASX_04235;Name=AC3ASX_04235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04235 JBYLIA010000001.1 GeneMarkS-2+ CDS 769124 769291 . + 0 ID=cds-MHV1764738.1;Parent=gene-AC3ASX_04235;Dbxref=NCBI_GP:MHV1764738.1;Name=MHV1764738.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04235;product=hypothetical protein;protein_id=MHV1764738.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 769731 770284 . - . ID=gene-AC3ASX_04240;Name=AC3ASX_04240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04240;pseudo=true JBYLIA010000001.1 Protein Homology CDS 769731 770284 . - 0 ID=cds-AC3ASX_04240;Parent=gene-AC3ASX_04240;Note=frameshifted%3B internal stop;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015812.1;locus_tag=AC3ASX_04240;product=DJ-1/PfpI family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 770392 771449 . + . ID=gene-AC3ASX_04245;Name=AC3ASX_04245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04245;pseudo=true JBYLIA010000001.1 Protein Homology CDS 770392 771449 . + 0 ID=cds-AC3ASX_04245;Parent=gene-AC3ASX_04245;Note=frameshifted%3B internal stop;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015815.1;locus_tag=AC3ASX_04245;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 771446 772678 . - . ID=gene-AC3ASX_04250;Name=AC3ASX_04250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04250 JBYLIA010000001.1 Protein Homology CDS 771446 772678 . - 0 ID=cds-MHV1764739.1;Parent=gene-AC3ASX_04250;Dbxref=NCBI_GP:MHV1764739.1;Name=MHV1764739.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033975.1;locus_tag=AC3ASX_04250;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=MHV1764739.1;transl_table=11 JBYLIA010000001.1 Genbank gene 772685 772945 . - . ID=gene-AC3ASX_04255;Name=AC3ASX_04255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04255 JBYLIA010000001.1 Protein Homology CDS 772685 772945 . - 0 ID=cds-MHV1764740.1;Parent=gene-AC3ASX_04255;Dbxref=NCBI_GP:MHV1764740.1;Name=MHV1764740.1;Ontology_term=GO:0015035;gbkey=CDS;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026156.1;locus_tag=AC3ASX_04255;product=glutaredoxin domain-containing protein;protein_id=MHV1764740.1;transl_table=11 JBYLIA010000001.1 Genbank gene 772949 774721 . - . ID=gene-AC3ASX_04260;Name=AC3ASX_04260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04260 JBYLIA010000001.1 Protein Homology CDS 772949 774721 . - 0 ID=cds-MHV1764741.1;Parent=gene-AC3ASX_04260;Dbxref=NCBI_GP:MHV1764741.1;Name=MHV1764741.1;Ontology_term=GO:0006260,GO:0004748;gbkey=CDS;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033974.1;locus_tag=AC3ASX_04260;product=ribonucleoside-diphosphate reductase subunit alpha;protein_id=MHV1764741.1;transl_table=11 JBYLIA010000001.1 Genbank gene 774928 775887 . - . ID=gene-AC3ASX_04265;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=AC3ASX_04265 JBYLIA010000001.1 Protein Homology CDS 774928 775887 . - 0 ID=cds-MHV1764742.1;Parent=gene-AC3ASX_04265;Dbxref=NCBI_GP:MHV1764742.1;Name=MHV1764742.1;Ontology_term=GO:0005975,GO:0016616;gbkey=CDS;gene=mdh;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003039393.1;locus_tag=AC3ASX_04265;product=malate dehydrogenase;protein_id=MHV1764742.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 776043 776553 . + . ID=gene-AC3ASX_04270;Name=AC3ASX_04270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04270;pseudo=true JBYLIA010000001.1 Protein Homology CDS 776043 776553 . + 0 ID=cds-AC3ASX_04270;Parent=gene-AC3ASX_04270;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429614.1;locus_tag=AC3ASX_04270;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 776569 777204 . + . ID=gene-AC3ASX_04275;Name=coq7;gbkey=Gene;gene=coq7;gene_biotype=protein_coding;locus_tag=AC3ASX_04275 JBYLIA010000001.1 Protein Homology CDS 776569 777204 . + 0 ID=cds-MHV1764743.1;Parent=gene-AC3ASX_04275;Dbxref=NCBI_GP:MHV1764743.1;Name=MHV1764743.1;Ontology_term=GO:0006744,GO:0004497;gbkey=CDS;gene=coq7;go_function=monooxygenase activity|0004497||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014715635.1;locus_tag=AC3ASX_04275;product=2-polyprenyl-3-methyl-6-methoxy-1%2C4-benzoquinone monooxygenase;protein_id=MHV1764743.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 777214 777781 . - . ID=gene-AC3ASX_04280;Name=AC3ASX_04280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04280;pseudo=true JBYLIA010000001.1 Protein Homology CDS 777214 777781 . - 0 ID=cds-AC3ASX_04280;Parent=gene-AC3ASX_04280;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018907.1;locus_tag=AC3ASX_04280;product=transglycosylase SLT domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 777831 778473 . - . ID=gene-AC3ASX_04285;Name=AC3ASX_04285;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04285;pseudo=true JBYLIA010000001.1 Protein Homology CDS 777831 778473 . - 0 ID=cds-AC3ASX_04285;Parent=gene-AC3ASX_04285;Note=frameshifted;Ontology_term=GO:0005524,GO:0008641,GO:0061503;gbkey=CDS;go_function=ATP binding|0005524||IEA,ubiquitin-like modifier activating enzyme activity|0008641||IEA,tRNA threonylcarbamoyladenosine dehydratase activity|0061503||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014715020.1;locus_tag=AC3ASX_04285;product=tRNA threonylcarbamoyladenosine dehydratase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 778477 779985 . - . ID=gene-AC3ASX_04290;Name=AC3ASX_04290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04290;pseudo=true JBYLIA010000001.1 Protein Homology CDS 778477 779985 . - 0 ID=cds-AC3ASX_04290;Parent=gene-AC3ASX_04290;Note=frameshifted;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003039383.1;locus_tag=AC3ASX_04290;product=alpha/beta hydrolase family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 780048 780629 . - . ID=gene-AC3ASX_04295;Name=AC3ASX_04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04295 JBYLIA010000001.1 Protein Homology CDS 780048 780629 . - 0 ID=cds-MHV1764744.1;Parent=gene-AC3ASX_04295;Dbxref=NCBI_GP:MHV1764744.1;Name=MHV1764744.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026147.1;locus_tag=AC3ASX_04295;product=HAD family hydrolase;protein_id=MHV1764744.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 780762 781357 . + . ID=gene-AC3ASX_04300;Name=AC3ASX_04300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04300;pseudo=true JBYLIA010000001.1 Protein Homology CDS 780762 781357 . + 0 ID=cds-AC3ASX_04300;Parent=gene-AC3ASX_04300;Note=frameshifted%3B internal stop;Ontology_term=GO:0008379,GO:0016209,GO:0051920;gbkey=CDS;go_function=thioredoxin peroxidase activity|0008379||IEA,antioxidant activity|0016209||IEA,peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429611.1;locus_tag=AC3ASX_04300;product=peroxiredoxin;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 781419 782125 . + . ID=gene-AC3ASX_04305;Name=AC3ASX_04305;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04305;pseudo=true JBYLIA010000001.1 Protein Homology CDS 781419 782125 . + 0 ID=cds-AC3ASX_04305;Parent=gene-AC3ASX_04305;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033957.1%2CRefSeq:WP_014548372.1;locus_tag=AC3ASX_04305;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 782387 782722 . + . ID=gene-AC3ASX_04310;Name=AC3ASX_04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04310 JBYLIA010000001.1 GeneMarkS-2+ CDS 782387 782722 . + 0 ID=cds-MHV1764745.1;Parent=gene-AC3ASX_04310;Dbxref=NCBI_GP:MHV1764745.1;Name=MHV1764745.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04310;product=hypothetical protein;protein_id=MHV1764745.1;transl_table=11 JBYLIA010000001.1 Genbank gene 782863 783555 . + . ID=gene-AC3ASX_04315;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=AC3ASX_04315 JBYLIA010000001.1 Protein Homology CDS 782863 783555 . + 0 ID=cds-MHV1764746.1;Parent=gene-AC3ASX_04315;Dbxref=NCBI_GP:MHV1764746.1;Name=MHV1764746.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548371.1;locus_tag=AC3ASX_04315;product=DNA polymerase III subunit epsilon;protein_id=MHV1764746.1;transl_table=11 JBYLIA010000001.1 Genbank gene 783549 784022 . + . ID=gene-AC3ASX_04320;Name=AC3ASX_04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04320 JBYLIA010000001.1 Protein Homology CDS 783549 784022 . + 0 ID=cds-MHV1764747.1;Parent=gene-AC3ASX_04320;Dbxref=NCBI_GP:MHV1764747.1;Name=MHV1764747.1;Ontology_term=GO:0006508,GO:0008270,GO:0016787;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549827.1;locus_tag=AC3ASX_04320;product=M15 family metallopeptidase;protein_id=MHV1764747.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 784009 785417 . + . ID=gene-AC3ASX_04325;Name=AC3ASX_04325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04325;pseudo=true JBYLIA010000001.1 Protein Homology CDS 784009 785417 . + 0 ID=cds-AC3ASX_04325;Parent=gene-AC3ASX_04325;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003029050.1;locus_tag=AC3ASX_04325;product=COG3014 family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 785868 786038 . + . ID=gene-AC3ASX_04330;Name=AC3ASX_04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04330 JBYLIA010000001.1 GeneMarkS-2+ CDS 785868 786038 . + 0 ID=cds-MHV1764748.1;Parent=gene-AC3ASX_04330;Dbxref=NCBI_GP:MHV1764748.1;Name=MHV1764748.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04330;product=hypothetical protein;protein_id=MHV1764748.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 786844 788325 . + . ID=gene-AC3ASX_04335;Name=AC3ASX_04335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04335;pseudo=true JBYLIA010000001.1 Protein Homology CDS 786844 788325 . + 0 ID=cds-AC3ASX_04335;Parent=gene-AC3ASX_04335;Note=frameshifted%3B internal stop;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003023258.1;locus_tag=AC3ASX_04335;product=aldehyde dehydrogenase family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 788369 788484 . + . ID=gene-AC3ASX_04340;Name=AC3ASX_04340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04340;pseudo=true JBYLIA010000001.1 Protein Homology CDS 788369 788484 . + 0 ID=cds-AC3ASX_04340;Parent=gene-AC3ASX_04340;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003030538.1;locus_tag=AC3ASX_04340;product=DUF1338 domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 788488 788724 . + . ID=gene-AC3ASX_04345;Name=AC3ASX_04345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04345;pseudo=true JBYLIA010000001.1 Protein Homology CDS 788488 788724 . + 0 ID=cds-AC3ASX_04345;Parent=gene-AC3ASX_04345;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003039347.1;locus_tag=AC3ASX_04345;product=glutaredoxin;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 789020 789235 . + . ID=gene-AC3ASX_04350;Name=AC3ASX_04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04350 JBYLIA010000001.1 Protein Homology CDS 789020 789235 . + 0 ID=cds-MHV1764749.1;Parent=gene-AC3ASX_04350;Dbxref=NCBI_GP:MHV1764749.1;Name=MHV1764749.1;Ontology_term=GO:0005507;gbkey=CDS;go_function=copper ion binding|0005507||IEA;inference=COORDINATES: protein motif:HMM:NF019352.7;locus_tag=AC3ASX_04350;product=multicopper oxidase domain-containing protein;protein_id=MHV1764749.1;transl_table=11 JBYLIA010000001.1 Genbank gene 789228 789755 . + . ID=gene-AC3ASX_04355;Name=AC3ASX_04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04355 JBYLIA010000001.1 Protein Homology CDS 789228 789755 . + 0 ID=cds-MHV1764750.1;Parent=gene-AC3ASX_04355;Dbxref=NCBI_GP:MHV1764750.1;Name=MHV1764750.1;Ontology_term=GO:0005507,GO:0009055;gbkey=CDS;go_function=copper ion binding|0005507||IEA,electron transfer activity|0009055||IEA;inference=COORDINATES: protein motif:HMM:NF012612.7;locus_tag=AC3ASX_04355;product=cupredoxin domain-containing protein;protein_id=MHV1764750.1;transl_table=11 JBYLIA010000001.1 Genbank gene 789866 789964 . + . ID=gene-AC3ASX_04360;Name=AC3ASX_04360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04360 JBYLIA010000001.1 Protein Homology CDS 789866 789964 . + 0 ID=cds-MHV1764751.1;Parent=gene-AC3ASX_04360;Dbxref=NCBI_GP:MHV1764751.1;Name=MHV1764751.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF019351.7;locus_tag=AC3ASX_04360;product=multicopper oxidase domain-containing protein;protein_id=MHV1764751.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 790084 790948 . - . ID=gene-AC3ASX_04365;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=pseudogene;locus_tag=AC3ASX_04365;pseudo=true JBYLIA010000001.1 Protein Homology CDS 790084 790948 . - 0 ID=cds-AC3ASX_04365;Parent=gene-AC3ASX_04365;Note=frameshifted%3B internal stop;gbkey=CDS;gene=oxyR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015875.1;locus_tag=AC3ASX_04365;product=oxidative stress transcriptional regulator OxyR;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 791052 791576 . + . ID=gene-AC3ASX_04370;Name=AC3ASX_04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04370 JBYLIA010000001.1 Protein Homology CDS 791052 791576 . + 0 ID=cds-MHV1764752.1;Parent=gene-AC3ASX_04370;Dbxref=NCBI_GP:MHV1764752.1;Name=MHV1764752.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429605.1;locus_tag=AC3ASX_04370;product=redoxin family protein;protein_id=MHV1764752.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 791592 792183 . + . ID=gene-AC3ASX_04375;Name=AC3ASX_04375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04375;pseudo=true JBYLIA010000001.1 Protein Homology CDS 791592 792183 . + 0 ID=cds-AC3ASX_04375;Parent=gene-AC3ASX_04375;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036601.1;locus_tag=AC3ASX_04375;product=Rossmann-fold NAD(P)-binding domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 792219 792884 . - . ID=gene-AC3ASX_04380;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=AC3ASX_04380 JBYLIA010000001.1 Protein Homology CDS 792219 792884 . - 0 ID=cds-MHV1764753.1;Parent=gene-AC3ASX_04380;Dbxref=NCBI_GP:MHV1764753.1;Name=MHV1764753.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015884.1;locus_tag=AC3ASX_04380;product=(d)CMP kinase;protein_id=MHV1764753.1;transl_table=11 JBYLIA010000001.1 Genbank gene 792871 793923 . - . ID=gene-AC3ASX_04385;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=AC3ASX_04385 JBYLIA010000001.1 Protein Homology CDS 792871 793923 . - 0 ID=cds-MHV1764754.1;Parent=gene-AC3ASX_04385;Dbxref=NCBI_GP:MHV1764754.1;Name=MHV1764754.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate transaminase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018933.1;locus_tag=AC3ASX_04385;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=MHV1764754.1;transl_table=11 JBYLIA010000001.1 Genbank gene 794659 794829 . - . ID=gene-AC3ASX_04390;Name=AC3ASX_04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04390 JBYLIA010000001.1 GeneMarkS-2+ CDS 794659 794829 . - 0 ID=cds-MHV1764755.1;Parent=gene-AC3ASX_04390;Dbxref=NCBI_GP:MHV1764755.1;Name=MHV1764755.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04390;product=hypothetical protein;protein_id=MHV1764755.1;transl_table=11 JBYLIA010000001.1 Genbank gene 795224 796150 . - . ID=gene-AC3ASX_04395;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=AC3ASX_04395 JBYLIA010000001.1 Protein Homology CDS 795224 796150 . - 0 ID=cds-MHV1764756.1;Parent=gene-AC3ASX_04395;Dbxref=NCBI_GP:MHV1764756.1;Name=MHV1764756.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014715370.1;locus_tag=AC3ASX_04395;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=MHV1764756.1;transl_table=11 JBYLIA010000001.1 Genbank gene 796832 797167 . + . ID=gene-AC3ASX_04400;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=AC3ASX_04400 JBYLIA010000001.1 Protein Homology CDS 796832 797167 . + 0 ID=cds-MHV1764757.1;Parent=gene-AC3ASX_04400;Dbxref=NCBI_GP:MHV1764757.1;Name=MHV1764757.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015897.1;locus_tag=AC3ASX_04400;product=30S ribosomal protein S6;protein_id=MHV1764757.1;transl_table=11 JBYLIA010000001.1 Genbank gene 797186 797404 . + . ID=gene-AC3ASX_04405;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=AC3ASX_04405 JBYLIA010000001.1 Protein Homology CDS 797186 797404 . + 0 ID=cds-MHV1764758.1;Parent=gene-AC3ASX_04405;Dbxref=NCBI_GP:MHV1764758.1;Name=MHV1764758.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714980.1;locus_tag=AC3ASX_04405;product=30S ribosomal protein S18;protein_id=MHV1764758.1;transl_table=11 JBYLIA010000001.1 Genbank gene 797423 797878 . + . ID=gene-AC3ASX_04410;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=AC3ASX_04410 JBYLIA010000001.1 Protein Homology CDS 797423 797878 . + 0 ID=cds-MHV1764759.1;Parent=gene-AC3ASX_04410;Dbxref=NCBI_GP:MHV1764759.1;Name=MHV1764759.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280980.1;locus_tag=AC3ASX_04410;product=50S ribosomal protein L9;protein_id=MHV1764759.1;transl_table=11 JBYLIA010000001.1 Genbank gene 797972 799360 . + . ID=gene-AC3ASX_04415;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=AC3ASX_04415 JBYLIA010000001.1 Protein Homology CDS 797972 799360 . + 0 ID=cds-MHV1764760.1;Parent=gene-AC3ASX_04415;Dbxref=NCBI_GP:MHV1764760.1;Name=MHV1764760.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=dnaB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013923197.1;locus_tag=AC3ASX_04415;product=replicative DNA helicase;protein_id=MHV1764760.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 799392 800505 . + . ID=gene-AC3ASX_04420;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=pseudogene;locus_tag=AC3ASX_04420;pseudo=true JBYLIA010000001.1 Protein Homology CDS 799392 800505 . + 0 ID=cds-AC3ASX_04420;Parent=gene-AC3ASX_04420;Note=frameshifted%3B internal stop;Ontology_term=GO:0030488,GO:0070475,GO:0008757,GO:0016433;gbkey=CDS;gene=rlmN;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,rRNA (adenine) methyltransferase activity|0016433||IEA;go_process=tRNA methylation|0030488||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021179.1;locus_tag=AC3ASX_04420;product=dual-specificity RNA methyltransferase RlmN;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 800557 801399 . + . ID=gene-AC3ASX_04425;Name=AC3ASX_04425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04425;pseudo=true JBYLIA010000001.1 Protein Homology CDS 800557 801399 . + 0 ID=cds-AC3ASX_04425;Parent=gene-AC3ASX_04425;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548351.1;locus_tag=AC3ASX_04425;product=pilus assembly protein PilF;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 801392 802207 . + . ID=gene-AC3ASX_04430;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=AC3ASX_04430 JBYLIA010000001.1 Protein Homology CDS 801392 802207 . + 0 ID=cds-MHV1764761.1;Parent=gene-AC3ASX_04430;Dbxref=NCBI_GP:MHV1764761.1;Name=MHV1764761.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026111.1;locus_tag=AC3ASX_04430;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=MHV1764761.1;transl_table=11 JBYLIA010000001.1 Genbank gene 802207 802635 . + . ID=gene-AC3ASX_04435;Name=AC3ASX_04435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04435 JBYLIA010000001.1 Protein Homology CDS 802207 802635 . + 0 ID=cds-MHV1764762.1;Parent=gene-AC3ASX_04435;Dbxref=NCBI_GP:MHV1764762.1;Name=MHV1764762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033896.1;locus_tag=AC3ASX_04435;product=chloroquine resistance protein;protein_id=MHV1764762.1;transl_table=11 JBYLIA010000001.1 Genbank gene 802613 803053 . + . ID=gene-AC3ASX_04440;Name=AC3ASX_04440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04440 JBYLIA010000001.1 Protein Homology CDS 802613 803053 . + 0 ID=cds-MHV1764763.1;Parent=gene-AC3ASX_04440;Dbxref=NCBI_GP:MHV1764763.1;Name=MHV1764763.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015924.1;locus_tag=AC3ASX_04440;product=GNAT family N-acetyltransferase;protein_id=MHV1764763.1;transl_table=11 JBYLIA010000001.1 Genbank gene 803341 803982 . + . ID=gene-AC3ASX_04445;Name=AC3ASX_04445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04445 JBYLIA010000001.1 Protein Homology CDS 803341 803982 . + 0 ID=cds-MHV1764764.1;Parent=gene-AC3ASX_04445;Dbxref=NCBI_GP:MHV1764764.1;Name=MHV1764764.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280987.1;locus_tag=AC3ASX_04445;product=PQ-loop repeat-containing protein;protein_id=MHV1764764.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 804045 804496 . + . ID=gene-AC3ASX_04450;Name=AC3ASX_04450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04450;pseudo=true JBYLIA010000001.1 Protein Homology CDS 804045 804496 . + 0 ID=cds-AC3ASX_04450;Parent=gene-AC3ASX_04450;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036556.1;locus_tag=AC3ASX_04450;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 804559 805536 . + . ID=gene-AC3ASX_04455;Name=AC3ASX_04455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04455 JBYLIA010000001.1 Protein Homology CDS 804559 805536 . + 0 ID=cds-MHV1764765.1;Parent=gene-AC3ASX_04455;Dbxref=NCBI_GP:MHV1764765.1;Name=MHV1764765.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010031574.1;locus_tag=AC3ASX_04455;product=polyprenyl synthetase family protein;protein_id=MHV1764765.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 805553 806420 . - . ID=gene-AC3ASX_04460;Name=AC3ASX_04460;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04460;pseudo=true JBYLIA010000001.1 Protein Homology CDS 805553 806420 . - 0 ID=cds-AC3ASX_04460;Parent=gene-AC3ASX_04460;Note=frameshifted;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429490.1;locus_tag=AC3ASX_04460;product=FKBP-type peptidyl-prolyl cis-trans isomerase N-terminal domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 806435 807237 . - . ID=gene-AC3ASX_04465;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=pseudogene;locus_tag=AC3ASX_04465;pseudo=true JBYLIA010000001.1 Protein Homology CDS 806435 807237 . - 0 ID=cds-AC3ASX_04465;Parent=gene-AC3ASX_04465;Note=frameshifted%3B internal stop;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013923187.1;locus_tag=AC3ASX_04465;product=tRNA 2-thiocytidine(32) synthetase TtcA;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 807230 807640 . - . ID=gene-AC3ASX_04470;Name=AC3ASX_04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04470 JBYLIA010000001.1 Protein Homology CDS 807230 807640 . - 0 ID=cds-MHV1764766.1;Parent=gene-AC3ASX_04470;Dbxref=NCBI_GP:MHV1764766.1;Name=MHV1764766.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548165.1;locus_tag=AC3ASX_04470;product=acyl-CoA thioesterase;protein_id=MHV1764766.1;transl_table=11 JBYLIA010000001.1 Genbank gene 807657 808268 . - . ID=gene-AC3ASX_04475;Name=AC3ASX_04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04475 JBYLIA010000001.1 Protein Homology CDS 807657 808268 . - 0 ID=cds-MHV1764767.1;Parent=gene-AC3ASX_04475;Dbxref=NCBI_GP:MHV1764767.1;Name=MHV1764767.1;Ontology_term=GO:0008933;gbkey=CDS;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549787.1;locus_tag=AC3ASX_04475;product=transglycosylase SLT domain-containing protein;protein_id=MHV1764767.1;transl_table=11 JBYLIA010000001.1 Genbank gene 808269 809672 . - . ID=gene-AC3ASX_04480;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=AC3ASX_04480 JBYLIA010000001.1 Protein Homology CDS 808269 809672 . - 0 ID=cds-MHV1764768.1;Parent=gene-AC3ASX_04480;Dbxref=NCBI_GP:MHV1764768.1;Name=MHV1764768.1;Ontology_term=GO:0009252,GO:0004175,GO:0009002;gbkey=CDS;gene=dacB;go_function=endopeptidase activity|0004175||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549786.1;locus_tag=AC3ASX_04480;product=D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine endopeptidase;protein_id=MHV1764768.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 809927 810126 . + . ID=gene-AC3ASX_04485;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=pseudogene;locus_tag=AC3ASX_04485;pseudo=true JBYLIA010000001.1 Protein Homology CDS 809927 810126 . + 0 ID=cds-AC3ASX_04485;Parent=gene-AC3ASX_04485;Note=frameshifted;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033846.1;locus_tag=AC3ASX_04485;product=30S ribosomal protein S21;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 810188 810634 . + . ID=gene-AC3ASX_04490;Name=AC3ASX_04490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04490 JBYLIA010000001.1 Protein Homology CDS 810188 810634 . + 0 ID=cds-MHV1764769.1;Parent=gene-AC3ASX_04490;Dbxref=NCBI_GP:MHV1764769.1;Name=MHV1764769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429494.1;locus_tag=AC3ASX_04490;product=GatB/YqeY domain-containing protein;protein_id=MHV1764769.1;transl_table=11 JBYLIA010000001.1 Genbank gene 810654 812471 . + . ID=gene-AC3ASX_04495;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=AC3ASX_04495 JBYLIA010000001.1 Protein Homology CDS 810654 812471 . + 0 ID=cds-MHV1764770.1;Parent=gene-AC3ASX_04495;Dbxref=NCBI_GP:MHV1764770.1;Name=MHV1764770.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548168.1;locus_tag=AC3ASX_04495;product=DNA primase;protein_id=MHV1764770.1;transl_table=11 JBYLIA010000001.1 Genbank gene 812491 814224 . + . ID=gene-AC3ASX_04500;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=AC3ASX_04500 JBYLIA010000001.1 Protein Homology CDS 812491 814224 . + 0 ID=cds-MHV1764771.1;Parent=gene-AC3ASX_04500;Dbxref=NCBI_GP:MHV1764771.1;Name=MHV1764771.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548169.1;locus_tag=AC3ASX_04500;product=RNA polymerase sigma factor RpoD;protein_id=MHV1764771.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 814335 815603 . + . ID=gene-AC3ASX_04505;Name=AC3ASX_04505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04505;pseudo=true JBYLIA010000001.1 Protein Homology CDS 814335 815603 . + 0 ID=cds-AC3ASX_04505;Parent=gene-AC3ASX_04505;Note=frameshifted%3B internal stop;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549783.1;locus_tag=AC3ASX_04505;product=NAD(P)/FAD-dependent oxidoreductase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 815634 816242 . - . ID=gene-AC3ASX_04510;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=AC3ASX_04510 JBYLIA010000001.1 Protein Homology CDS 815634 816242 . - 0 ID=cds-MHV1764772.1;Parent=gene-AC3ASX_04510;Dbxref=NCBI_GP:MHV1764772.1;Name=MHV1764772.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018995.1;locus_tag=AC3ASX_04510;product=lipoyl(octanoyl) transferase LipB;protein_id=MHV1764772.1;transl_table=11 JBYLIA010000001.1 Genbank gene 816253 816537 . - . ID=gene-AC3ASX_04515;Name=AC3ASX_04515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04515 JBYLIA010000001.1 Protein Homology CDS 816253 816537 . - 0 ID=cds-MHV1764773.1;Parent=gene-AC3ASX_04515;Dbxref=NCBI_GP:MHV1764773.1;Name=MHV1764773.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548174.1;locus_tag=AC3ASX_04515;product=HP0495 family protein;protein_id=MHV1764773.1;transl_table=11 JBYLIA010000001.1 Genbank gene 816570 817904 . - . ID=gene-AC3ASX_04520;Name=AC3ASX_04520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04520 JBYLIA010000001.1 Protein Homology CDS 816570 817904 . - 0 ID=cds-MHV1764774.1;Parent=gene-AC3ASX_04520;Dbxref=NCBI_GP:MHV1764774.1;Name=MHV1764774.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021136.1;locus_tag=AC3ASX_04520;product=D-alanyl-D-alanine carboxypeptidase family protein;protein_id=MHV1764774.1;transl_table=11 JBYLIA010000001.1 Genbank gene 818063 818584 . + . ID=gene-AC3ASX_04525;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=AC3ASX_04525 JBYLIA010000001.1 Protein Homology CDS 818063 818584 . + 0 ID=cds-MHV1764775.1;Parent=gene-AC3ASX_04525;Dbxref=NCBI_GP:MHV1764775.1;Name=MHV1764775.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429498.1;locus_tag=AC3ASX_04525;product=inorganic diphosphatase;protein_id=MHV1764775.1;transl_table=11 JBYLIA010000001.1 Genbank gene 818674 819213 . + . ID=gene-AC3ASX_04530;Name=AC3ASX_04530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04530 JBYLIA010000001.1 Protein Homology CDS 818674 819213 . + 0 ID=cds-MHV1764776.1;Parent=gene-AC3ASX_04530;Dbxref=NCBI_GP:MHV1764776.1;Name=MHV1764776.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549778.1;locus_tag=AC3ASX_04530;product=KdsC family phosphatase;protein_id=MHV1764776.1;transl_table=11 JBYLIA010000001.1 Genbank gene 819221 819853 . + . ID=gene-AC3ASX_04535;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=AC3ASX_04535 JBYLIA010000001.1 Protein Homology CDS 819221 819853 . + 0 ID=cds-MHV1764777.1;Parent=gene-AC3ASX_04535;Dbxref=NCBI_GP:MHV1764777.1;Name=MHV1764777.1;Ontology_term=GO:0015920,GO:0015221,GO:0005886;gbkey=CDS;gene=lptC;go_component=plasma membrane|0005886||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033776.1;locus_tag=AC3ASX_04535;product=LPS export ABC transporter periplasmic protein LptC;protein_id=MHV1764777.1;transl_table=11 JBYLIA010000001.1 Genbank gene 819840 820730 . + . ID=gene-AC3ASX_04540;Name=AC3ASX_04540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04540 JBYLIA010000001.1 Protein Homology CDS 819840 820730 . + 0 ID=cds-MHV1764778.1;Parent=gene-AC3ASX_04540;Dbxref=NCBI_GP:MHV1764778.1;Name=MHV1764778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287719.1;locus_tag=AC3ASX_04540;product=LptA/OstA family protein;protein_id=MHV1764778.1;transl_table=11 JBYLIA010000001.1 Genbank gene 820737 821468 . + . ID=gene-AC3ASX_04545;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=AC3ASX_04545 JBYLIA010000001.1 Protein Homology CDS 820737 821468 . + 0 ID=cds-MHV1764779.1;Parent=gene-AC3ASX_04545;Dbxref=NCBI_GP:MHV1764779.1;Name=MHV1764779.1;Ontology_term=GO:0015920,GO:0015221,GO:0042626,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=lipopolysaccharide transport|0015920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021125.1;locus_tag=AC3ASX_04545;product=LPS export ABC transporter ATP-binding protein;protein_id=MHV1764779.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 821518 821705 . + . ID=gene-AC3ASX_04550;Name=AC3ASX_04550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04550;pseudo=true JBYLIA010000001.1 Protein Homology CDS 821518 821705 . + 0 ID=cds-AC3ASX_04550;Parent=gene-AC3ASX_04550;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015993.1;locus_tag=AC3ASX_04550;product=fumarylacetoacetate hydrolase family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 822296 822421 . + . ID=gene-AC3ASX_04555;Name=AC3ASX_04555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04555 JBYLIA010000001.1 GeneMarkS-2+ CDS 822296 822421 . + 0 ID=cds-MHV1764780.1;Parent=gene-AC3ASX_04555;Dbxref=NCBI_GP:MHV1764780.1;Name=MHV1764780.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04555;product=hypothetical protein;protein_id=MHV1764780.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 822702 823075 . + . ID=gene-AC3ASX_04560;Name=AC3ASX_04560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04560;pseudo=true JBYLIA010000001.1 Protein Homology CDS 822702 823075 . + 0 ID=cds-AC3ASX_04560;Parent=gene-AC3ASX_04560;Note=frameshifted;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023295.7;locus_tag=AC3ASX_04560;product=type I restriction enzyme endonuclease domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 823467 823554 . - . ID=gene-AC3ASX_04565;Name=AC3ASX_04565;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_04565 JBYLIA010000001.1 tRNAscan-SE tRNA 823467 823554 . - . ID=rna-AC3ASX_04565;Parent=gene-AC3ASX_04565;anticodon=(pos:complement(823518..823520));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_04565;product=tRNA-Ser JBYLIA010000001.1 tRNAscan-SE exon 823467 823554 . - . ID=exon-AC3ASX_04565-1;Parent=rna-AC3ASX_04565;anticodon=(pos:complement(823518..823520));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_04565;product=tRNA-Ser JBYLIA010000001.1 Genbank pseudogene 823698 824247 . + . ID=gene-AC3ASX_04570;Name=AC3ASX_04570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04570;pseudo=true JBYLIA010000001.1 Protein Homology CDS 823698 824247 . + 0 ID=cds-AC3ASX_04570;Parent=gene-AC3ASX_04570;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020605.1;locus_tag=AC3ASX_04570;product=HXXEE domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 824314 825453 . + . ID=gene-AC3ASX_04575;Name=AC3ASX_04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04575 JBYLIA010000001.1 Protein Homology CDS 824314 825453 . + 0 ID=cds-MHV1764781.1;Parent=gene-AC3ASX_04575;Dbxref=NCBI_GP:MHV1764781.1;Name=MHV1764781.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548042.1;locus_tag=AC3ASX_04575;product=cation diffusion facilitator family transporter;protein_id=MHV1764781.1;transl_table=11 JBYLIA010000001.1 Genbank gene 825469 826332 . + . ID=gene-AC3ASX_04580;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=AC3ASX_04580 JBYLIA010000001.1 Protein Homology CDS 825469 826332 . + 0 ID=cds-MHV1764782.1;Parent=gene-AC3ASX_04580;Dbxref=NCBI_GP:MHV1764782.1;Name=MHV1764782.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012119011.1;locus_tag=AC3ASX_04580;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=MHV1764782.1;transl_table=11 JBYLIA010000001.1 Genbank gene 826591 826662 . + . ID=gene-AC3ASX_04585;Name=AC3ASX_04585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04585 JBYLIA010000001.1 Protein Homology CDS 826591 826662 . + 0 ID=cds-MHV1764783.1;Parent=gene-AC3ASX_04585;Dbxref=NCBI_GP:MHV1764783.1;Name=MHV1764783.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF027503.7;locus_tag=AC3ASX_04585;product=hypothetical protein;protein_id=MHV1764783.1;transl_table=11 JBYLIA010000001.1 Genbank gene 826798 826968 . + . ID=gene-AC3ASX_04590;Name=AC3ASX_04590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04590 JBYLIA010000001.1 Protein Homology CDS 826798 826968 . + 0 ID=cds-MHV1764784.1;Parent=gene-AC3ASX_04590;Dbxref=NCBI_GP:MHV1764784.1;Name=MHV1764784.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.7;locus_tag=AC3ASX_04590;product=hypothetical protein;protein_id=MHV1764784.1;transl_table=11 JBYLIA010000001.1 Genbank gene 826886 827155 . + . ID=gene-AC3ASX_04595;Name=AC3ASX_04595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04595 JBYLIA010000001.1 GeneMarkS-2+ CDS 826886 827155 . + 0 ID=cds-MHV1764785.1;Parent=gene-AC3ASX_04595;Dbxref=NCBI_GP:MHV1764785.1;Name=MHV1764785.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04595;product=hypothetical protein;protein_id=MHV1764785.1;transl_table=11 JBYLIA010000001.1 Genbank gene 827168 827458 . + . ID=gene-AC3ASX_04600;Name=AC3ASX_04600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04600 JBYLIA010000001.1 Protein Homology CDS 827168 827458 . + 0 ID=cds-MHV1764786.1;Parent=gene-AC3ASX_04600;Dbxref=NCBI_GP:MHV1764786.1;Name=MHV1764786.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.7;locus_tag=AC3ASX_04600;product=AMP-binding protein;protein_id=MHV1764786.1;transl_table=11 JBYLIA010000001.1 Genbank gene 827691 827864 . + . ID=gene-AC3ASX_04605;Name=AC3ASX_04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04605 JBYLIA010000001.1 GeneMarkS-2+ CDS 827691 827864 . + 0 ID=cds-MHV1764787.1;Parent=gene-AC3ASX_04605;Dbxref=NCBI_GP:MHV1764787.1;Name=MHV1764787.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04605;product=hypothetical protein;protein_id=MHV1764787.1;transl_table=11 JBYLIA010000001.1 Genbank gene 827845 827988 . + . ID=gene-AC3ASX_04610;Name=AC3ASX_04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04610 JBYLIA010000001.1 GeneMarkS-2+ CDS 827845 827988 . + 0 ID=cds-MHV1764788.1;Parent=gene-AC3ASX_04610;Dbxref=NCBI_GP:MHV1764788.1;Name=MHV1764788.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04610;product=hypothetical protein;protein_id=MHV1764788.1;transl_table=11 JBYLIA010000001.1 Genbank gene 828166 828369 . + . ID=gene-AC3ASX_04615;Name=AC3ASX_04615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04615 JBYLIA010000001.1 Protein Homology CDS 828166 828369 . + 0 ID=cds-MHV1764789.1;Parent=gene-AC3ASX_04615;Dbxref=NCBI_GP:MHV1764789.1;Name=MHV1764789.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024591.7;locus_tag=AC3ASX_04615;product=AMP-binding enzyme;protein_id=MHV1764789.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 828381 829300 . + . ID=gene-AC3ASX_04620;Name=AC3ASX_04620;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04620;pseudo=true JBYLIA010000001.1 Protein Homology CDS 828381 829300 . + 0 ID=cds-AC3ASX_04620;Parent=gene-AC3ASX_04620;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016573.1;locus_tag=AC3ASX_04620;product=DMT family transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 829303 829518 . - . ID=gene-AC3ASX_04625;Name=AC3ASX_04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04625 JBYLIA010000001.1 Protein Homology CDS 829303 829518 . - 0 ID=cds-MHV1764790.1;Parent=gene-AC3ASX_04625;Dbxref=NCBI_GP:MHV1764790.1;Name=MHV1764790.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548046.1;locus_tag=AC3ASX_04625;product=hypothetical protein;protein_id=MHV1764790.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 829689 830076 . + . ID=gene-AC3ASX_04630;Name=AC3ASX_04630;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04630;pseudo=true JBYLIA010000001.1 Protein Homology CDS 829689 830076 . + 0 ID=cds-AC3ASX_04630;Parent=gene-AC3ASX_04630;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013923266.1;locus_tag=AC3ASX_04630;product=prepilin-type N-terminal cleavage/methylation domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 830425 830802 . + . ID=gene-AC3ASX_04635;Name=AC3ASX_04635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04635 JBYLIA010000001.1 GeneMarkS-2+ CDS 830425 830802 . + 0 ID=cds-MHV1764791.1;Parent=gene-AC3ASX_04635;Dbxref=NCBI_GP:MHV1764791.1;Name=MHV1764791.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04635;product=hypothetical protein;protein_id=MHV1764791.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 830739 831021 . - . ID=gene-AC3ASX_04640;Name=AC3ASX_04640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04640;pseudo=true JBYLIA010000001.1 Protein Homology CDS 830739 831021 . - 0 ID=cds-AC3ASX_04640;Parent=gene-AC3ASX_04640;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038910.1;locus_tag=AC3ASX_04640;product=lysozyme inhibitor LprI family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 831051 832100 . - . ID=gene-AC3ASX_04645;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=AC3ASX_04645 JBYLIA010000001.1 Protein Homology CDS 831051 832100 . - 0 ID=cds-MHV1764792.1;Parent=gene-AC3ASX_04645;Dbxref=NCBI_GP:MHV1764792.1;Name=MHV1764792.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016570.1;locus_tag=AC3ASX_04645;product=DNA replication/repair protein RecF;protein_id=MHV1764792.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 832104 832363 . - . ID=gene-AC3ASX_04650;Name=AC3ASX_04650;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04650;pseudo=true JBYLIA010000001.1 Protein Homology CDS 832104 832363 . - 0 ID=cds-AC3ASX_04650;Parent=gene-AC3ASX_04650;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033569.1;locus_tag=AC3ASX_04650;product=TatD family hydrolase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 832675 834759 . + . ID=gene-AC3ASX_04655;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=AC3ASX_04655 JBYLIA010000001.1 Protein Homology CDS 832675 834759 . + 0 ID=cds-MHV1764793.1;Parent=gene-AC3ASX_04655;Dbxref=NCBI_GP:MHV1764793.1;Name=MHV1764793.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548050.1;locus_tag=AC3ASX_04655;product=glycine--tRNA ligase subunit beta;protein_id=MHV1764793.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 834740 835113 . + . ID=gene-AC3ASX_04660;Name=AC3ASX_04660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04660;pseudo=true JBYLIA010000001.1 Protein Homology CDS 834740 835113 . + 0 ID=cds-AC3ASX_04660;Parent=gene-AC3ASX_04660;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020650.1;locus_tag=AC3ASX_04660;product=DUF2237 family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 835098 836095 . - . ID=gene-AC3ASX_04665;Name=AC3ASX_04665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04665;pseudo=true JBYLIA010000001.1 Protein Homology CDS 835098 836095 . - 0 ID=cds-AC3ASX_04665;Parent=gene-AC3ASX_04665;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429700.1;locus_tag=AC3ASX_04665;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 836100 837218 . - . ID=gene-AC3ASX_04670;Name=AC3ASX_04670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04670 JBYLIA010000001.1 Protein Homology CDS 836100 837218 . - 0 ID=cds-MHV1764794.1;Parent=gene-AC3ASX_04670;Dbxref=NCBI_GP:MHV1764794.1;Name=MHV1764794.1;Ontology_term=GO:0042780,GO:0000166,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012281137.1;locus_tag=AC3ASX_04670;product=ribonuclease D;protein_id=MHV1764794.1;transl_table=11 JBYLIA010000001.1 Genbank gene 837327 839165 . + . ID=gene-AC3ASX_04675;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=AC3ASX_04675 JBYLIA010000001.1 Protein Homology CDS 837327 839165 . + 0 ID=cds-MHV1764795.1;Parent=gene-AC3ASX_04675;Dbxref=NCBI_GP:MHV1764795.1;Name=MHV1764795.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549596.1;locus_tag=AC3ASX_04675;product=excinuclease ABC subunit UvrC;protein_id=MHV1764795.1;transl_table=11 JBYLIA010000001.1 Genbank gene 839703 839846 . + . ID=gene-AC3ASX_04680;Name=AC3ASX_04680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04680 JBYLIA010000001.1 Protein Homology CDS 839703 839846 . + 0 ID=cds-MHV1764796.1;Parent=gene-AC3ASX_04680;Dbxref=NCBI_GP:MHV1764796.1;Name=MHV1764796.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013718.7;locus_tag=AC3ASX_04680;product=phosphatase PAP2 family protein;protein_id=MHV1764796.1;transl_table=11 JBYLIA010000001.1 Genbank gene 840493 840849 . + . ID=gene-AC3ASX_04685;Name=AC3ASX_04685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04685 JBYLIA010000001.1 GeneMarkS-2+ CDS 840493 840849 . + 0 ID=cds-MHV1764797.1;Parent=gene-AC3ASX_04685;Dbxref=NCBI_GP:MHV1764797.1;Name=MHV1764797.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04685;product=hypothetical protein;protein_id=MHV1764797.1;transl_table=11 JBYLIA010000001.1 Genbank gene 841089 841187 . + . ID=gene-AC3ASX_04690;Name=AC3ASX_04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04690 JBYLIA010000001.1 Protein Homology CDS 841089 841187 . + 0 ID=cds-MHV1764798.1;Parent=gene-AC3ASX_04690;Dbxref=NCBI_GP:MHV1764798.1;Name=MHV1764798.1;Ontology_term=GO:0097163;gbkey=CDS;go_function=sulfur carrier activity|0097163||IEA;inference=COORDINATES: protein motif:HMM:NF013379.7;locus_tag=AC3ASX_04690;product=sulfurtransferase TusA family protein;protein_id=MHV1764798.1;transl_table=11 JBYLIA010000001.1 Genbank gene 841187 841375 . + . ID=gene-AC3ASX_04695;Name=AC3ASX_04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04695 JBYLIA010000001.1 Protein Homology CDS 841187 841375 . + 0 ID=cds-MHV1764799.1;Parent=gene-AC3ASX_04695;Dbxref=NCBI_GP:MHV1764799.1;Name=MHV1764799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016659.1;locus_tag=AC3ASX_04695;product=Trm112 family protein;protein_id=MHV1764799.1;transl_table=11 JBYLIA010000001.1 Genbank gene 841368 842120 . + . ID=gene-AC3ASX_04700;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=AC3ASX_04700 JBYLIA010000001.1 Protein Homology CDS 841368 842120 . + 0 ID=cds-MHV1764800.1;Parent=gene-AC3ASX_04700;Dbxref=NCBI_GP:MHV1764800.1;Name=MHV1764800.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014715357.1;locus_tag=AC3ASX_04700;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=MHV1764800.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 842113 842507 . + . ID=gene-AC3ASX_04705;Name=AC3ASX_04705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04705;pseudo=true JBYLIA010000001.1 Protein Homology CDS 842113 842507 . + 0 ID=cds-AC3ASX_04705;Parent=gene-AC3ASX_04705;Note=frameshifted;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038804.1;locus_tag=AC3ASX_04705;product=HIT domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 842504 843596 . - . ID=gene-AC3ASX_04710;Name=AC3ASX_04710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04710;pseudo=true JBYLIA010000001.1 Protein Homology CDS 842504 843596 . - 0 ID=cds-AC3ASX_04710;Parent=gene-AC3ASX_04710;Note=frameshifted%3B internal stop;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524,GO:0005534;gbkey=CDS;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA,galactose binding|0005534||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012281130.1;locus_tag=AC3ASX_04710;product=galactokinase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 843612 844585 . - . ID=gene-AC3ASX_04715;Name=galT;gbkey=Gene;gene=galT;gene_biotype=pseudogene;locus_tag=AC3ASX_04715;pseudo=true JBYLIA010000001.1 Protein Homology CDS 843612 844585 . - 0 ID=cds-AC3ASX_04715;Parent=gene-AC3ASX_04715;Note=frameshifted%3B internal stop;Ontology_term=GO:0006012,GO:0008108,GO:0008270;gbkey=CDS;gene=galT;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA,zinc ion binding|0008270||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549599.1;locus_tag=AC3ASX_04715;product=galactose-1-phosphate uridylyltransferase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 844676 844810 . + . ID=gene-AC3ASX_04720;Name=AC3ASX_04720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04720 JBYLIA010000001.1 GeneMarkS-2+ CDS 844676 844810 . + 0 ID=cds-MHV1764801.1;Parent=gene-AC3ASX_04720;Dbxref=NCBI_GP:MHV1764801.1;Name=MHV1764801.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04720;product=hypothetical protein;protein_id=MHV1764801.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 844891 845450 . + . ID=gene-AC3ASX_04725;Name=AC3ASX_04725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04725;pseudo=true JBYLIA010000001.1 Protein Homology CDS 844891 845450 . + 0 ID=cds-AC3ASX_04725;Parent=gene-AC3ASX_04725;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012312.7;locus_tag=AC3ASX_04725;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 845459 845872 . + . ID=gene-AC3ASX_04730;Name=AC3ASX_04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04730 JBYLIA010000001.1 Protein Homology CDS 845459 845872 . + 0 ID=cds-MHV1764802.1;Parent=gene-AC3ASX_04730;Dbxref=NCBI_GP:MHV1764802.1;Name=MHV1764802.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012312.7;locus_tag=AC3ASX_04730;product=MFS transporter;protein_id=MHV1764802.1;transl_table=11 JBYLIA010000001.1 Genbank gene 845904 847304 . + . ID=gene-AC3ASX_04735;Name=AC3ASX_04735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04735 JBYLIA010000001.1 Protein Homology CDS 845904 847304 . + 0 ID=cds-MHV1764803.1;Parent=gene-AC3ASX_04735;Dbxref=NCBI_GP:MHV1764803.1;Name=MHV1764803.1;Ontology_term=GO:0008643,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016648.1;locus_tag=AC3ASX_04735;product=sugar porter family MFS transporter;protein_id=MHV1764803.1;transl_table=11 JBYLIA010000001.1 Genbank gene 847399 847677 . + . ID=gene-AC3ASX_04740;Name=AC3ASX_04740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04740 JBYLIA010000001.1 Protein Homology CDS 847399 847677 . + 0 ID=cds-MHV1764804.1;Parent=gene-AC3ASX_04740;Dbxref=NCBI_GP:MHV1764804.1;Name=MHV1764804.1;Ontology_term=GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287850.1;locus_tag=AC3ASX_04740;product=peptidylprolyl isomerase;protein_id=MHV1764804.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 847743 849451 . + . ID=gene-AC3ASX_04745;Name=AC3ASX_04745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04745;pseudo=true JBYLIA010000001.1 Protein Homology CDS 847743 849451 . + 0 ID=cds-AC3ASX_04745;Parent=gene-AC3ASX_04745;Note=frameshifted;Ontology_term=GO:0003676,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036099.1;locus_tag=AC3ASX_04745;product=DEAD/DEAH box helicase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 849567 850139 . + . ID=gene-AC3ASX_04750;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=AC3ASX_04750 JBYLIA010000001.1 Protein Homology CDS 849567 850139 . + 0 ID=cds-MHV1764805.1;Parent=gene-AC3ASX_04750;Dbxref=NCBI_GP:MHV1764805.1;Name=MHV1764805.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549602.1;locus_tag=AC3ASX_04750;product=guanylate kinase;protein_id=MHV1764805.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 850160 851189 . + . ID=gene-AC3ASX_04755;Name=AC3ASX_04755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04755;pseudo=true JBYLIA010000001.1 Protein Homology CDS 850160 851189 . + 0 ID=cds-AC3ASX_04755;Parent=gene-AC3ASX_04755;Note=frameshifted%3B internal stop;Ontology_term=GO:0009435,GO:0008987,GO:0051539;gbkey=CDS;go_function=quinolinate synthetase A activity|0008987||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022311.1;locus_tag=AC3ASX_04755;product=quinolinate synthase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 851198 852033 . + . ID=gene-AC3ASX_04760;Name=nadC;gbkey=Gene;gene=nadC;gene_biotype=pseudogene;locus_tag=AC3ASX_04760;pseudo=true JBYLIA010000001.1 Protein Homology CDS 851198 852033 . + 0 ID=cds-AC3ASX_04760;Parent=gene-AC3ASX_04760;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;gene=nadC;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004337142.1;locus_tag=AC3ASX_04760;product=carboxylating nicotinate-nucleotide diphosphorylase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 852010 853143 . + . ID=gene-AC3ASX_04765;Name=AC3ASX_04765;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04765;pseudo=true JBYLIA010000001.1 Protein Homology CDS 852010 853143 . + 0 ID=cds-AC3ASX_04765;Parent=gene-AC3ASX_04765;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549604.1;locus_tag=AC3ASX_04765;product=FAD-binding protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 853651 854101 . - . ID=gene-AC3ASX_04770;Name=AC3ASX_04770;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04770;pseudo=true JBYLIA010000001.1 Protein Homology CDS 853651 854101 . - 0 ID=cds-AC3ASX_04770;Parent=gene-AC3ASX_04770;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020552.1;locus_tag=AC3ASX_04770;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 854202 854549 . + . ID=gene-AC3ASX_04775;Name=AC3ASX_04775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04775 JBYLIA010000001.1 Protein Homology CDS 854202 854549 . + 0 ID=cds-MHV1764806.1;Parent=gene-AC3ASX_04775;Dbxref=NCBI_GP:MHV1764806.1;Name=MHV1764806.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004337133.1;locus_tag=AC3ASX_04775;product=chorismate mutase;protein_id=MHV1764806.1;transl_table=11 JBYLIA010000001.1 Genbank gene 854578 855048 . + . ID=gene-AC3ASX_04780;Name=AC3ASX_04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04780 JBYLIA010000001.1 Protein Homology CDS 854578 855048 . + 0 ID=cds-MHV1764807.1;Parent=gene-AC3ASX_04780;Dbxref=NCBI_GP:MHV1764807.1;Name=MHV1764807.1;Ontology_term=GO:0004602,GO:0043295;gbkey=CDS;go_function=glutathione peroxidase activity|0004602||IEA,glutathione binding|0043295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020555.1;locus_tag=AC3ASX_04780;product=glutathione peroxidase;protein_id=MHV1764807.1;transl_table=11 JBYLIA010000001.1 Genbank gene 855341 855493 . + . ID=gene-AC3ASX_04785;Name=AC3ASX_04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04785 JBYLIA010000001.1 Protein Homology CDS 855341 855493 . + 0 ID=cds-MHV1764808.1;Parent=gene-AC3ASX_04785;Dbxref=NCBI_GP:MHV1764808.1;Name=MHV1764808.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017495.7;locus_tag=AC3ASX_04785;product=DUF819 family protein;protein_id=MHV1764808.1;transl_table=11 JBYLIA010000001.1 Genbank gene 855957 856124 . + . ID=gene-AC3ASX_04790;Name=AC3ASX_04790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04790 JBYLIA010000001.1 Protein Homology CDS 855957 856124 . + 0 ID=cds-MHV1764809.1;Parent=gene-AC3ASX_04790;Dbxref=NCBI_GP:MHV1764809.1;Name=MHV1764809.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017495.7;locus_tag=AC3ASX_04790;product=DUF819 family protein;protein_id=MHV1764809.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 856191 856911 . + . ID=gene-AC3ASX_04795;Name=AC3ASX_04795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04795;pseudo=true JBYLIA010000001.1 Protein Homology CDS 856191 856911 . + 0 ID=cds-AC3ASX_04795;Parent=gene-AC3ASX_04795;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036120.1;locus_tag=AC3ASX_04795;product=enolase C-terminal domain-like protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 856943 857579 . + . ID=gene-AC3ASX_04800;Name=AC3ASX_04800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04800;pseudo=true JBYLIA010000001.1 Protein Homology CDS 856943 857579 . + 0 ID=cds-AC3ASX_04800;Parent=gene-AC3ASX_04800;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036124.1;locus_tag=AC3ASX_04800;product=alpha/beta hydrolase family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 857923 858297 . + . ID=gene-AC3ASX_04805;Name=AC3ASX_04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04805 JBYLIA010000001.1 GeneMarkS-2+ CDS 857923 858297 . + 0 ID=cds-MHV1764810.1;Parent=gene-AC3ASX_04805;Dbxref=NCBI_GP:MHV1764810.1;Name=MHV1764810.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04805;product=hypothetical protein;protein_id=MHV1764810.1;transl_table=11 JBYLIA010000001.1 Genbank gene 858382 858627 . + . ID=gene-AC3ASX_04810;Name=AC3ASX_04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04810 JBYLIA010000001.1 GeneMarkS-2+ CDS 858382 858627 . + 0 ID=cds-MHV1764811.1;Parent=gene-AC3ASX_04810;Dbxref=NCBI_GP:MHV1764811.1;Name=MHV1764811.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04810;product=SPASM domain-containing protein;protein_id=MHV1764811.1;transl_table=11 JBYLIA010000001.1 Genbank gene 858633 858773 . + . ID=gene-AC3ASX_04815;Name=AC3ASX_04815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04815 JBYLIA010000001.1 GeneMarkS-2+ CDS 858633 858773 . + 0 ID=cds-MHV1764812.1;Parent=gene-AC3ASX_04815;Dbxref=NCBI_GP:MHV1764812.1;Name=MHV1764812.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04815;product=hypothetical protein;protein_id=MHV1764812.1;transl_table=11 JBYLIA010000001.1 Genbank gene 859024 859233 . - . ID=gene-AC3ASX_04820;Name=AC3ASX_04820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04820 JBYLIA010000001.1 Protein Homology CDS 859024 859233 . - 0 ID=cds-MHV1764813.1;Parent=gene-AC3ASX_04820;Dbxref=NCBI_GP:MHV1764813.1;Name=MHV1764813.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014345.7;locus_tag=AC3ASX_04820;product=linear amide C-N hydrolase;protein_id=MHV1764813.1;transl_table=11 JBYLIA010000001.1 Genbank gene 859409 859642 . - . ID=gene-AC3ASX_04825;Name=AC3ASX_04825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04825 JBYLIA010000001.1 GeneMarkS-2+ CDS 859409 859642 . - 0 ID=cds-MHV1764814.1;Parent=gene-AC3ASX_04825;Dbxref=NCBI_GP:MHV1764814.1;Name=MHV1764814.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04825;product=hypothetical protein;protein_id=MHV1764814.1;transl_table=11 JBYLIA010000001.1 Genbank gene 859818 859982 . + . ID=gene-AC3ASX_04830;Name=AC3ASX_04830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04830 JBYLIA010000001.1 GeneMarkS-2+ CDS 859818 859982 . + 0 ID=cds-MHV1764815.1;Parent=gene-AC3ASX_04830;Dbxref=NCBI_GP:MHV1764815.1;Name=MHV1764815.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04830;product=hypothetical protein;protein_id=MHV1764815.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 859979 860426 . + . ID=gene-AC3ASX_04835;Name=AC3ASX_04835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04835;pseudo=true JBYLIA010000001.1 Protein Homology CDS 859979 860426 . + 0 ID=cds-AC3ASX_04835;Parent=gene-AC3ASX_04835;Note=frameshifted;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003042191.1;locus_tag=AC3ASX_04835;product=acyl-CoA thioesterase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 860493 861248 . - . ID=gene-AC3ASX_04840;Name=AC3ASX_04840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04840 JBYLIA010000001.1 Protein Homology CDS 860493 861248 . - 0 ID=cds-MHV1764816.1;Parent=gene-AC3ASX_04840;Dbxref=NCBI_GP:MHV1764816.1;Name=MHV1764816.1;Ontology_term=GO:0006396,GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287668.1;locus_tag=AC3ASX_04840;product=TrmH family RNA methyltransferase;protein_id=MHV1764816.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 861413 861713 . + . ID=gene-AC3ASX_04845;Name=AC3ASX_04845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04845;pseudo=true JBYLIA010000001.1 Protein Homology CDS 861413 861713 . + 0 ID=cds-AC3ASX_04845;Parent=gene-AC3ASX_04845;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038950.1;locus_tag=AC3ASX_04845;product=BCCT family transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 861905 862381 . - . ID=gene-AC3ASX_04850;Name=AC3ASX_04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04850 JBYLIA010000001.1 Protein Homology CDS 861905 862381 . - 0 ID=cds-MHV1764817.1;Parent=gene-AC3ASX_04850;Dbxref=NCBI_GP:MHV1764817.1;Name=MHV1764817.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021261.1;locus_tag=AC3ASX_04850;product=TspO/MBR family protein;protein_id=MHV1764817.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 862509 863350 . + . ID=gene-AC3ASX_04855;Name=AC3ASX_04855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04855;pseudo=true JBYLIA010000001.1 Protein Homology CDS 862509 863350 . + 0 ID=cds-AC3ASX_04855;Parent=gene-AC3ASX_04855;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549652.1;locus_tag=AC3ASX_04855;product=bifunctional methionine sulfoxide reductase B/A protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 863353 863637 . + . ID=gene-AC3ASX_04860;Name=AC3ASX_04860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04860 JBYLIA010000001.1 GeneMarkS-2+ CDS 863353 863637 . + 0 ID=cds-MHV1764818.1;Parent=gene-AC3ASX_04860;Dbxref=NCBI_GP:MHV1764818.1;Name=MHV1764818.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04860;product=hypothetical protein;protein_id=MHV1764818.1;transl_table=11 JBYLIA010000001.1 Genbank gene 864055 864189 . - . ID=gene-AC3ASX_04865;Name=AC3ASX_04865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04865 JBYLIA010000001.1 GeneMarkS-2+ CDS 864055 864189 . - 0 ID=cds-MHV1764819.1;Parent=gene-AC3ASX_04865;Dbxref=NCBI_GP:MHV1764819.1;Name=MHV1764819.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04865;product=hypothetical protein;protein_id=MHV1764819.1;transl_table=11 JBYLIA010000001.1 Genbank gene 864753 865862 . - . ID=gene-AC3ASX_04870;Name=AC3ASX_04870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04870 JBYLIA010000001.1 Protein Homology CDS 864753 865862 . - 0 ID=cds-MHV1764820.1;Parent=gene-AC3ASX_04870;Dbxref=NCBI_GP:MHV1764820.1;Name=MHV1764820.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015083939.1;locus_tag=AC3ASX_04870;product=thioredoxin domain-containing protein;protein_id=MHV1764820.1;transl_table=11 JBYLIA010000001.1 Genbank gene 865882 866175 . - . ID=gene-AC3ASX_04875;Name=fipA;gbkey=Gene;gene=fipA;gene_biotype=protein_coding;locus_tag=AC3ASX_04875 JBYLIA010000001.1 Protein Homology CDS 865882 866175 . - 0 ID=cds-MHV1764821.1;Parent=gene-AC3ASX_04875;Dbxref=NCBI_GP:MHV1764821.1;Name=MHV1764821.1;gbkey=CDS;gene=fipA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019053.1;locus_tag=AC3ASX_04875;product=infectivity potentiator lipoprotein FipA;protein_id=MHV1764821.1;transl_table=11 JBYLIA010000001.1 Genbank gene 866524 866676 . - . ID=gene-AC3ASX_04880;Name=AC3ASX_04880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04880 JBYLIA010000001.1 Protein Homology CDS 866524 866676 . - 0 ID=cds-MHV1764822.1;Parent=gene-AC3ASX_04880;Dbxref=NCBI_GP:MHV1764822.1;Name=MHV1764822.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024875.7;locus_tag=AC3ASX_04880;product=4Fe-4S double cluster binding domain-containing protein;protein_id=MHV1764822.1;transl_table=11 JBYLIA010000001.1 Genbank gene 866633 866782 . - . ID=gene-AC3ASX_04885;Name=AC3ASX_04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04885 JBYLIA010000001.1 Protein Homology CDS 866633 866782 . - 0 ID=cds-MHV1764823.1;Parent=gene-AC3ASX_04885;Dbxref=NCBI_GP:MHV1764823.1;Name=MHV1764823.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024875.7;locus_tag=AC3ASX_04885;product=4Fe-4S double cluster binding domain-containing protein;protein_id=MHV1764823.1;transl_table=11 JBYLIA010000001.1 Genbank gene 866959 867138 . - . ID=gene-AC3ASX_04890;Name=AC3ASX_04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04890 JBYLIA010000001.1 Protein Homology CDS 866959 867138 . - 0 ID=cds-MHV1764824.1;Parent=gene-AC3ASX_04890;Dbxref=NCBI_GP:MHV1764824.1;Name=MHV1764824.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019931.7;locus_tag=AC3ASX_04890;product=QueG-associated DUF1730 domain-containing protein;protein_id=MHV1764824.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 867338 867673 . - . ID=gene-AC3ASX_04895;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=pseudogene;locus_tag=AC3ASX_04895;pseudo=true JBYLIA010000001.1 Protein Homology CDS 867338 867673 . - 0 ID=cds-AC3ASX_04895;Parent=gene-AC3ASX_04895;Note=internal stop;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: protein motif:HMM:NF014464.8;locus_tag=AC3ASX_04895;product=ribosome silencing factor;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 867771 868094 . + . ID=gene-AC3ASX_04900;Name=AC3ASX_04900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04900;pseudo=true JBYLIA010000001.1 Protein Homology CDS 867771 868094 . + 0 ID=cds-AC3ASX_04900;Parent=gene-AC3ASX_04900;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016046.1;locus_tag=AC3ASX_04900;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 868218 868322 . + . ID=gene-AC3ASX_04905;Name=AC3ASX_04905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04905 JBYLIA010000001.1 Protein Homology CDS 868218 868322 . + 0 ID=cds-MHV1764825.1;Parent=gene-AC3ASX_04905;Dbxref=NCBI_GP:MHV1764825.1;Name=MHV1764825.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012789.7;locus_tag=AC3ASX_04905;product=hypothetical protein;protein_id=MHV1764825.1;transl_table=11 JBYLIA010000001.1 Genbank gene 868369 868680 . + . ID=gene-AC3ASX_04910;Name=AC3ASX_04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04910 JBYLIA010000001.1 Protein Homology CDS 868369 868680 . + 0 ID=cds-MHV1764826.1;Parent=gene-AC3ASX_04910;Dbxref=NCBI_GP:MHV1764826.1;Name=MHV1764826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019055.1;locus_tag=AC3ASX_04910;product=hypothetical protein;protein_id=MHV1764826.1;transl_table=11 JBYLIA010000001.1 Genbank gene 869161 869334 . + . ID=gene-AC3ASX_04915;Name=AC3ASX_04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04915 JBYLIA010000001.1 GeneMarkS-2+ CDS 869161 869334 . + 0 ID=cds-MHV1764827.1;Parent=gene-AC3ASX_04915;Dbxref=NCBI_GP:MHV1764827.1;Name=MHV1764827.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04915;product=hypothetical protein;protein_id=MHV1764827.1;transl_table=11 JBYLIA010000001.1 Genbank gene 869661 869873 . + . ID=gene-AC3ASX_04920;Name=AC3ASX_04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04920 JBYLIA010000001.1 Protein Homology CDS 869661 869873 . + 0 ID=cds-MHV1764828.1;Parent=gene-AC3ASX_04920;Dbxref=NCBI_GP:MHV1764828.1;Name=MHV1764828.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF024754.7;locus_tag=AC3ASX_04920;product=3'-5' exonuclease;protein_id=MHV1764828.1;transl_table=11 JBYLIA010000001.1 Genbank gene 870155 870595 . - . ID=gene-AC3ASX_04925;Name=AC3ASX_04925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04925 JBYLIA010000001.1 Protein Homology CDS 870155 870595 . - 0 ID=cds-MHV1764829.1;Parent=gene-AC3ASX_04925;Dbxref=NCBI_GP:MHV1764829.1;Name=MHV1764829.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548397.1;locus_tag=AC3ASX_04925;product=hypothetical protein;protein_id=MHV1764829.1;transl_table=11 JBYLIA010000001.1 Genbank gene 870751 873345 . + . ID=gene-AC3ASX_04930;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=AC3ASX_04930 JBYLIA010000001.1 Protein Homology CDS 870751 873345 . + 0 ID=cds-MHV1764830.1;Parent=gene-AC3ASX_04930;Dbxref=NCBI_GP:MHV1764830.1;Name=MHV1764830.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280970.1;locus_tag=AC3ASX_04930;product=alanine--tRNA ligase;protein_id=MHV1764830.1;transl_table=11 JBYLIA010000001.1 Genbank gene 873353 874732 . + . ID=gene-AC3ASX_04935;Name=AC3ASX_04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04935 JBYLIA010000001.1 Protein Homology CDS 873353 874732 . + 0 ID=cds-MHV1764831.1;Parent=gene-AC3ASX_04935;Dbxref=NCBI_GP:MHV1764831.1;Name=MHV1764831.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021243.1;locus_tag=AC3ASX_04935;product=TolC family protein;protein_id=MHV1764831.1;transl_table=11 JBYLIA010000001.1 Genbank gene 874735 876114 . + . ID=gene-AC3ASX_04940;Name=AC3ASX_04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04940 JBYLIA010000001.1 Protein Homology CDS 874735 876114 . + 0 ID=cds-MHV1764832.1;Parent=gene-AC3ASX_04940;Dbxref=NCBI_GP:MHV1764832.1;Name=MHV1764832.1;Ontology_term=GO:0006508,GO:0046872,GO:0070006;gbkey=CDS;go_function=metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548394.1;locus_tag=AC3ASX_04940;product=M17 family metallopeptidase;protein_id=MHV1764832.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 876294 877219 . + . ID=gene-AC3ASX_04945;Name=AC3ASX_04945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04945;pseudo=true JBYLIA010000001.1 Protein Homology CDS 876294 877219 . + 0 ID=cds-AC3ASX_04945;Parent=gene-AC3ASX_04945;Note=frameshifted%3B internal stop;Ontology_term=GO:0004801;gbkey=CDS;go_function=transaldolase activity|0004801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026661.1;locus_tag=AC3ASX_04945;product=transaldolase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 878171 878344 . - . ID=gene-AC3ASX_04950;Name=AC3ASX_04950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04950 JBYLIA010000001.1 Protein Homology CDS 878171 878344 . - 0 ID=cds-MHV1764833.1;Parent=gene-AC3ASX_04950;Dbxref=NCBI_GP:MHV1764833.1;Name=MHV1764833.1;Ontology_term=GO:0034258,GO:0034257,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nicotinamide riboside transmembrane transporter activity|0034257||IEA;go_process=nicotinamide riboside transport|0034258||IEA;inference=COORDINATES: protein motif:HMM:NF016837.7;locus_tag=AC3ASX_04950;product=nicotinamide mononucleotide transporter;protein_id=MHV1764833.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 878419 878899 . - . ID=gene-AC3ASX_04955;Name=AC3ASX_04955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04955;pseudo=true JBYLIA010000001.1 Protein Homology CDS 878419 878899 . - 0 ID=cds-AC3ASX_04955;Parent=gene-AC3ASX_04955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003042236.1;locus_tag=AC3ASX_04955;product=isochorismatase family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 879200 879358 . - . ID=gene-AC3ASX_04960;Name=AC3ASX_04960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04960;pseudo=true JBYLIA010000001.1 Protein Homology CDS 879200 879358 . - 0 ID=cds-AC3ASX_04960;Parent=gene-AC3ASX_04960;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016658.7;locus_tag=AC3ASX_04960;product=DUF547 domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 879933 880679 . + . ID=gene-AC3ASX_04965;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=AC3ASX_04965 JBYLIA010000001.1 Protein Homology CDS 879933 880679 . + 0 ID=cds-MHV1764834.1;Parent=gene-AC3ASX_04965;Dbxref=NCBI_GP:MHV1764834.1;Name=MHV1764834.1;Ontology_term=GO:0006400,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548345.1;locus_tag=AC3ASX_04965;product=CAF17-like 4Fe-4S cluster assembly/insertion protein YgfZ;protein_id=MHV1764834.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 880673 882685 . + . ID=gene-AC3ASX_04970;Name=AC3ASX_04970;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04970;pseudo=true JBYLIA010000001.1 Protein Homology CDS 880673 882685 . + 0 ID=cds-AC3ASX_04970;Parent=gene-AC3ASX_04970;Note=frameshifted%3B internal stop;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549667.1;locus_tag=AC3ASX_04970;product=UvrD-helicase domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 882740 883572 . + . ID=gene-AC3ASX_04975;Name=AC3ASX_04975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04975;pseudo=true JBYLIA010000001.1 Protein Homology CDS 882740 883572 . + 0 ID=cds-AC3ASX_04975;Parent=gene-AC3ASX_04975;Note=frameshifted;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036302.1;locus_tag=AC3ASX_04975;product=CvfB family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 883584 884564 . - . ID=gene-AC3ASX_04980;Name=trhO;gbkey=Gene;gene=trhO;gene_biotype=pseudogene;gene_synonym=yceA;locus_tag=AC3ASX_04980;pseudo=true JBYLIA010000001.1 Protein Homology CDS 883584 884564 . - 0 ID=cds-AC3ASX_04980;Parent=gene-AC3ASX_04980;Note=frameshifted%3B internal stop;Ontology_term=GO:0006400;gbkey=CDS;gene=trhO;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548342.1;locus_tag=AC3ASX_04980;product=oxygen-dependent tRNA uridine(34) hydroxylase TrhO;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 884858 885040 . + . ID=gene-AC3ASX_04985;Name=AC3ASX_04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_04985 JBYLIA010000001.1 GeneMarkS-2+ CDS 884858 885040 . + 0 ID=cds-MHV1764835.1;Parent=gene-AC3ASX_04985;Dbxref=NCBI_GP:MHV1764835.1;Name=MHV1764835.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_04985;product=hypothetical protein;protein_id=MHV1764835.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 885254 886110 . + . ID=gene-AC3ASX_04990;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=pseudogene;locus_tag=AC3ASX_04990;pseudo=true JBYLIA010000001.1 Protein Homology CDS 885254 886110 . + 0 ID=cds-AC3ASX_04990;Parent=gene-AC3ASX_04990;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rdgC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021220.1;locus_tag=AC3ASX_04990;product=recombination-associated protein RdgC;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 886115 886404 . + . ID=gene-AC3ASX_04995;Name=AC3ASX_04995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_04995;pseudo=true JBYLIA010000001.1 Protein Homology CDS 886115 886404 . + 0 ID=cds-AC3ASX_04995;Parent=gene-AC3ASX_04995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429655.1;locus_tag=AC3ASX_04995;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 887077 887382 . + . ID=gene-AC3ASX_05000;Name=AC3ASX_05000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05000 JBYLIA010000001.1 Protein Homology CDS 887077 887382 . + 0 ID=cds-MHV1764836.1;Parent=gene-AC3ASX_05000;Dbxref=NCBI_GP:MHV1764836.1;Name=MHV1764836.1;Ontology_term=GO:0000287,GO:0008897;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: protein motif:HMM:NF013786.7;locus_tag=AC3ASX_05000;product=4'-phosphopantetheinyl transferase superfamily protein;protein_id=MHV1764836.1;transl_table=11 JBYLIA010000001.1 Genbank gene 887624 888610 . - . ID=gene-AC3ASX_05005;Name=AC3ASX_05005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05005 JBYLIA010000001.1 Protein Homology CDS 887624 888610 . - 0 ID=cds-MHV1764837.1;Parent=gene-AC3ASX_05005;Dbxref=NCBI_GP:MHV1764837.1;Name=MHV1764837.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013166.7;locus_tag=AC3ASX_05005;product=phosphopantetheine-binding protein;protein_id=MHV1764837.1;transl_table=11 JBYLIA010000001.1 Genbank gene 888680 889444 . - . ID=gene-AC3ASX_05010;Name=AC3ASX_05010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05010 JBYLIA010000001.1 Protein Homology CDS 888680 889444 . - 0 ID=cds-MHV1764838.1;Parent=gene-AC3ASX_05010;Dbxref=NCBI_GP:MHV1764838.1;Name=MHV1764838.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.7;locus_tag=AC3ASX_05010;product=AMP-binding protein;protein_id=MHV1764838.1;transl_table=11 JBYLIA010000001.1 Genbank gene 889548 890117 . - . ID=gene-AC3ASX_05015;Name=AC3ASX_05015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05015 JBYLIA010000001.1 Protein Homology CDS 889548 890117 . - 0 ID=cds-MHV1764839.1;Parent=gene-AC3ASX_05015;Dbxref=NCBI_GP:MHV1764839.1;Name=MHV1764839.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012711.7;locus_tag=AC3ASX_05015;product=AMP-binding protein;protein_id=MHV1764839.1;transl_table=11 JBYLIA010000001.1 Genbank gene 890241 890513 . - . ID=gene-AC3ASX_05020;Name=AC3ASX_05020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05020 JBYLIA010000001.1 Protein Homology CDS 890241 890513 . - 0 ID=cds-MHV1764840.1;Parent=gene-AC3ASX_05020;Dbxref=NCBI_GP:MHV1764840.1;Name=MHV1764840.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016109.7;locus_tag=AC3ASX_05020;product=SemiSWEET family sugar transporter;protein_id=MHV1764840.1;transl_table=11 JBYLIA010000001.1 Genbank gene 890543 890926 . - . ID=gene-AC3ASX_05025;Name=AC3ASX_05025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05025 JBYLIA010000001.1 GeneMarkS-2+ CDS 890543 890926 . - 0 ID=cds-MHV1764841.1;Parent=gene-AC3ASX_05025;Dbxref=NCBI_GP:MHV1764841.1;Name=MHV1764841.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05025;product=hypothetical protein;protein_id=MHV1764841.1;transl_table=11 JBYLIA010000001.1 Genbank gene 890980 891258 . - . ID=gene-AC3ASX_05030;Name=AC3ASX_05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05030 JBYLIA010000001.1 Protein Homology CDS 890980 891258 . - 0 ID=cds-MHV1764842.1;Parent=gene-AC3ASX_05030;Dbxref=NCBI_GP:MHV1764842.1;Name=MHV1764842.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020037.7;locus_tag=AC3ASX_05030;product=PAS domain-containing protein;protein_id=MHV1764842.1;transl_table=11 JBYLIA010000001.1 Genbank gene 891292 891504 . - . ID=gene-AC3ASX_05035;Name=AC3ASX_05035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05035 JBYLIA010000001.1 GeneMarkS-2+ CDS 891292 891504 . - 0 ID=cds-MHV1764843.1;Parent=gene-AC3ASX_05035;Dbxref=NCBI_GP:MHV1764843.1;Name=MHV1764843.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05035;product=hypothetical protein;protein_id=MHV1764843.1;transl_table=11 JBYLIA010000001.1 Genbank gene 892557 892820 . + . ID=gene-AC3ASX_05040;Name=AC3ASX_05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05040 JBYLIA010000001.1 GeneMarkS-2+ CDS 892557 892820 . + 0 ID=cds-MHV1764844.1;Parent=gene-AC3ASX_05040;Dbxref=NCBI_GP:MHV1764844.1;Name=MHV1764844.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05040;product=hypothetical protein;protein_id=MHV1764844.1;transl_table=11 JBYLIA010000001.1 Genbank gene 892935 893099 . + . ID=gene-AC3ASX_05045;Name=AC3ASX_05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05045 JBYLIA010000001.1 GeneMarkS-2+ CDS 892935 893099 . + 0 ID=cds-MHV1764845.1;Parent=gene-AC3ASX_05045;Dbxref=NCBI_GP:MHV1764845.1;Name=MHV1764845.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05045;product=hypothetical protein;protein_id=MHV1764845.1;transl_table=11 JBYLIA010000001.1 Genbank gene 893461 893625 . + . ID=gene-AC3ASX_05050;Name=AC3ASX_05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05050 JBYLIA010000001.1 Protein Homology CDS 893461 893625 . + 0 ID=cds-MHV1764846.1;Parent=gene-AC3ASX_05050;Dbxref=NCBI_GP:MHV1764846.1;Name=MHV1764846.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037479.8;locus_tag=AC3ASX_05050;product=hypothetical protein;protein_id=MHV1764846.1;transl_table=11 JBYLIA010000001.1 Genbank gene 894033 894371 . + . ID=gene-AC3ASX_05055;Name=AC3ASX_05055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05055 JBYLIA010000001.1 GeneMarkS-2+ CDS 894033 894371 . + 0 ID=cds-MHV1764847.1;Parent=gene-AC3ASX_05055;Dbxref=NCBI_GP:MHV1764847.1;Name=MHV1764847.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05055;product=hypothetical protein;protein_id=MHV1764847.1;transl_table=11 JBYLIA010000001.1 Genbank gene 894766 895089 . - . ID=gene-AC3ASX_05060;Name=fdxA;gbkey=Gene;gene=fdxA;gene_biotype=protein_coding;locus_tag=AC3ASX_05060 JBYLIA010000001.1 Protein Homology CDS 894766 895089 . - 0 ID=cds-MHV1764848.1;Parent=gene-AC3ASX_05060;Dbxref=NCBI_GP:MHV1764848.1;Name=MHV1764848.1;Ontology_term=GO:0009055,GO:0051539;gbkey=CDS;gene=fdxA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013923683.1;locus_tag=AC3ASX_05060;product=ferredoxin FdxA;protein_id=MHV1764848.1;transl_table=11 JBYLIA010000001.1 Genbank gene 895319 895972 . + . ID=gene-AC3ASX_05065;Name=AC3ASX_05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05065 JBYLIA010000001.1 Protein Homology CDS 895319 895972 . + 0 ID=cds-MHV1764849.1;Parent=gene-AC3ASX_05065;Dbxref=NCBI_GP:MHV1764849.1;Name=MHV1764849.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013923682.1;locus_tag=AC3ASX_05065;product=Frag1/DRAM/Sfk1 family protein;protein_id=MHV1764849.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 896033 896330 . + . ID=gene-AC3ASX_05070;Name=AC3ASX_05070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05070;pseudo=true JBYLIA010000001.1 Protein Homology CDS 896033 896330 . + 0 ID=cds-AC3ASX_05070;Parent=gene-AC3ASX_05070;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339855.1;locus_tag=AC3ASX_05070;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 896332 898944 . - . ID=gene-AC3ASX_05075;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=AC3ASX_05075 JBYLIA010000001.1 Protein Homology CDS 896332 898944 . - 0 ID=cds-MHV1764850.1;Parent=gene-AC3ASX_05075;Dbxref=NCBI_GP:MHV1764850.1;Name=MHV1764850.1;Ontology_term=GO:0009408,GO:0042026,GO:0005737;gbkey=CDS;gene=clpB;go_component=cytoplasm|0005737||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015005115.1;locus_tag=AC3ASX_05075;product=ATP-dependent chaperone ClpB;protein_id=MHV1764850.1;transl_table=11 JBYLIA010000001.1 Genbank gene 899253 899399 . + . ID=gene-AC3ASX_05080;Name=AC3ASX_05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05080 JBYLIA010000001.1 Protein Homology CDS 899253 899399 . + 0 ID=cds-MHV1764851.1;Parent=gene-AC3ASX_05080;Dbxref=NCBI_GP:MHV1764851.1;Name=MHV1764851.1;Ontology_term=GO:0034258,GO:0034257,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nicotinamide riboside transmembrane transporter activity|0034257||IEA;go_process=nicotinamide riboside transport|0034258||IEA;inference=COORDINATES: protein motif:HMM:NF016837.7;locus_tag=AC3ASX_05080;product=nicotinamide mononucleotide transporter;protein_id=MHV1764851.1;transl_table=11 JBYLIA010000001.1 Genbank gene 899536 899796 . + . ID=gene-AC3ASX_05085;Name=AC3ASX_05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05085 JBYLIA010000001.1 GeneMarkS-2+ CDS 899536 899796 . + 0 ID=cds-MHV1764852.1;Parent=gene-AC3ASX_05085;Dbxref=NCBI_GP:MHV1764852.1;Name=MHV1764852.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05085;product=hypothetical protein;protein_id=MHV1764852.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 899885 900197 . + . ID=gene-AC3ASX_05090;Name=AC3ASX_05090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05090;pseudo=true JBYLIA010000001.1 Protein Homology CDS 899885 900197 . + 0 ID=cds-AC3ASX_05090;Parent=gene-AC3ASX_05090;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011733734.1;locus_tag=AC3ASX_05090;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 900285 900928 . - . ID=gene-AC3ASX_05095;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=pseudogene;locus_tag=AC3ASX_05095;pseudo=true JBYLIA010000001.1 Protein Homology CDS 900285 900928 . - 0 ID=cds-AC3ASX_05095;Parent=gene-AC3ASX_05095;Note=frameshifted%3B internal stop;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014080.1;locus_tag=AC3ASX_05095;product=tryptophan synthase subunit alpha;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 900931 902131 . - . ID=gene-AC3ASX_05100;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=pseudogene;locus_tag=AC3ASX_05100;pseudo=true JBYLIA010000001.1 Protein Homology CDS 900931 902131 . - 0 ID=cds-AC3ASX_05100;Parent=gene-AC3ASX_05100;Note=frameshifted%3B internal stop;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003040724.1;locus_tag=AC3ASX_05100;product=tryptophan synthase subunit beta;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 902417 903380 . - . ID=gene-AC3ASX_05105;Name=AC3ASX_05105;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05105;pseudo=true JBYLIA010000001.1 Protein Homology CDS 902417 903380 . - 0 ID=cds-AC3ASX_05105;Parent=gene-AC3ASX_05105;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008237,GO:0008270;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011733733.1;locus_tag=AC3ASX_05105;product=gluzincin family metallopeptidase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 903316 904713 . - . ID=gene-AC3ASX_05110;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=pseudogene;locus_tag=AC3ASX_05110;pseudo=true JBYLIA010000001.1 Protein Homology CDS 903316 904713 . - 0 ID=cds-AC3ASX_05110;Parent=gene-AC3ASX_05110;Note=internal stop;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286891.1;locus_tag=AC3ASX_05110;product=H(+)/Cl(-) exchange transporter ClcA;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 904806 905204 . - . ID=gene-AC3ASX_05115;Name=AC3ASX_05115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05115 JBYLIA010000001.1 Protein Homology CDS 904806 905204 . - 0 ID=cds-MHV1764853.1;Parent=gene-AC3ASX_05115;Dbxref=NCBI_GP:MHV1764853.1;Name=MHV1764853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003032563.1;locus_tag=AC3ASX_05115;product=DUF3568 family protein;protein_id=MHV1764853.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 905206 905616 . - . ID=gene-AC3ASX_05120;Name=AC3ASX_05120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05120;pseudo=true JBYLIA010000001.1 Protein Homology CDS 905206 905616 . - 0 ID=cds-AC3ASX_05120;Parent=gene-AC3ASX_05120;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037879.1;locus_tag=AC3ASX_05120;product=DUF3568 domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 905636 906031 . - . ID=gene-AC3ASX_05125;Name=AC3ASX_05125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05125 JBYLIA010000001.1 Protein Homology CDS 905636 906031 . - 0 ID=cds-MHV1764854.1;Parent=gene-AC3ASX_05125;Dbxref=NCBI_GP:MHV1764854.1;Name=MHV1764854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286893.1;locus_tag=AC3ASX_05125;product=DUF3568 domain-containing protein;protein_id=MHV1764854.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 906235 906777 . + . ID=gene-AC3ASX_05130;Name=AC3ASX_05130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05130;pseudo=true JBYLIA010000001.1 Protein Homology CDS 906235 906777 . + 0 ID=cds-AC3ASX_05130;Parent=gene-AC3ASX_05130;Note=frameshifted%3B internal stop;Ontology_term=GO:0034258,GO:0034257,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nicotinamide riboside transmembrane transporter activity|0034257||IEA;go_process=nicotinamide riboside transport|0034258||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280291.1;locus_tag=AC3ASX_05130;product=nicotinamide mononucleotide transporter family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 906880 907098 . + . ID=gene-AC3ASX_05135;Name=AC3ASX_05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05135 JBYLIA010000001.1 Protein Homology CDS 906880 907098 . + 0 ID=cds-MHV1764855.1;Parent=gene-AC3ASX_05135;Dbxref=NCBI_GP:MHV1764855.1;Name=MHV1764855.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: protein motif:HMM:NF013213.7;locus_tag=AC3ASX_05135;product=TatD family hydrolase;protein_id=MHV1764855.1;transl_table=11 JBYLIA010000001.1 Genbank gene 907295 907438 . + . ID=gene-AC3ASX_05140;Name=AC3ASX_05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05140 JBYLIA010000001.1 GeneMarkS-2+ CDS 907295 907438 . + 0 ID=cds-MHV1764856.1;Parent=gene-AC3ASX_05140;Dbxref=NCBI_GP:MHV1764856.1;Name=MHV1764856.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05140;product=hypothetical protein;protein_id=MHV1764856.1;transl_table=11 JBYLIA010000001.1 Genbank gene 907911 908141 . + . ID=gene-AC3ASX_05145;Name=AC3ASX_05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05145 JBYLIA010000001.1 Protein Homology CDS 907911 908141 . + 0 ID=cds-MHV1764857.1;Parent=gene-AC3ASX_05145;Dbxref=NCBI_GP:MHV1764857.1;Name=MHV1764857.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012770.7;locus_tag=AC3ASX_05145;product=hypothetical protein;protein_id=MHV1764857.1;transl_table=11 JBYLIA010000001.1 Genbank gene 908098 908295 . + . ID=gene-AC3ASX_05150;Name=AC3ASX_05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05150 JBYLIA010000001.1 GeneMarkS-2+ CDS 908098 908295 . + 0 ID=cds-MHV1764858.1;Parent=gene-AC3ASX_05150;Dbxref=NCBI_GP:MHV1764858.1;Name=MHV1764858.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05150;product=hypothetical protein;protein_id=MHV1764858.1;transl_table=11 JBYLIA010000001.1 Genbank gene 908380 908532 . + . ID=gene-AC3ASX_05155;Name=AC3ASX_05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05155 JBYLIA010000001.1 GeneMarkS-2+ CDS 908380 908532 . + 0 ID=cds-MHV1764859.1;Parent=gene-AC3ASX_05155;Dbxref=NCBI_GP:MHV1764859.1;Name=MHV1764859.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05155;product=hypothetical protein;protein_id=MHV1764859.1;transl_table=11 JBYLIA010000001.1 Genbank gene 908845 910379 . + . ID=gene-AC3ASX_05160;Name=AC3ASX_05160;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC3ASX_05160 JBYLIA010000001.1 cmsearch rRNA 908845 910379 . + . ID=rna-AC3ASX_05160;Parent=gene-AC3ASX_05160;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_05160;product=16S ribosomal RNA JBYLIA010000001.1 cmsearch exon 908845 910379 . + . ID=exon-AC3ASX_05160-1;Parent=rna-AC3ASX_05160;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_05160;product=16S ribosomal RNA JBYLIA010000001.1 Genbank gene 910476 910552 . + . ID=gene-AC3ASX_05165;Name=AC3ASX_05165;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_05165 JBYLIA010000001.1 tRNAscan-SE tRNA 910476 910552 . + . ID=rna-AC3ASX_05165;Parent=gene-AC3ASX_05165;anticodon=(pos:910510..910512);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_05165;product=tRNA-Ile JBYLIA010000001.1 tRNAscan-SE exon 910476 910552 . + . ID=exon-AC3ASX_05165-1;Parent=rna-AC3ASX_05165;anticodon=(pos:910510..910512);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_05165;product=tRNA-Ile JBYLIA010000001.1 Genbank gene 910567 910642 . + . ID=gene-AC3ASX_05170;Name=AC3ASX_05170;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_05170 JBYLIA010000001.1 tRNAscan-SE tRNA 910567 910642 . + . ID=rna-AC3ASX_05170;Parent=gene-AC3ASX_05170;anticodon=(pos:910600..910602);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_05170;product=tRNA-Ala JBYLIA010000001.1 tRNAscan-SE exon 910567 910642 . + . ID=exon-AC3ASX_05170-1;Parent=rna-AC3ASX_05170;anticodon=(pos:910600..910602);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_05170;product=tRNA-Ala JBYLIA010000001.1 Genbank gene 910695 913583 . + . ID=gene-AC3ASX_05175;Name=AC3ASX_05175;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC3ASX_05175 JBYLIA010000001.1 cmsearch rRNA 910695 913583 . + . ID=rna-AC3ASX_05175;Parent=gene-AC3ASX_05175;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_05175;product=23S ribosomal RNA JBYLIA010000001.1 cmsearch exon 910695 913583 . + . ID=exon-AC3ASX_05175-1;Parent=rna-AC3ASX_05175;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_05175;product=23S ribosomal RNA JBYLIA010000001.1 Genbank gene 913631 913745 . + . ID=gene-AC3ASX_05180;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC3ASX_05180 JBYLIA010000001.1 cmsearch rRNA 913631 913745 . + . ID=rna-AC3ASX_05180;Parent=gene-AC3ASX_05180;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_05180;product=5S ribosomal RNA JBYLIA010000001.1 cmsearch exon 913631 913745 . + . ID=exon-AC3ASX_05180-1;Parent=rna-AC3ASX_05180;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_05180;product=5S ribosomal RNA JBYLIA010000001.1 Genbank pseudogene 914171 914735 . - . ID=gene-AC3ASX_05185;Name=AC3ASX_05185;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05185;pseudo=true JBYLIA010000001.1 Protein Homology CDS 914171 914735 . - 0 ID=cds-AC3ASX_05185;Parent=gene-AC3ASX_05185;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021978.1;locus_tag=AC3ASX_05185;product=disulfide bond formation protein B;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 914753 914911 . - . ID=gene-AC3ASX_05190;Name=AC3ASX_05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05190 JBYLIA010000001.1 Protein Homology CDS 914753 914911 . - 0 ID=cds-MHV1764860.1;Parent=gene-AC3ASX_05190;Dbxref=NCBI_GP:MHV1764860.1;Name=MHV1764860.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025430.1;locus_tag=AC3ASX_05190;product=DUF5993 family protein;protein_id=MHV1764860.1;transl_table=11 JBYLIA010000001.1 Genbank gene 914994 915920 . - . ID=gene-AC3ASX_05195;Name=AC3ASX_05195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05195 JBYLIA010000001.1 Protein Homology CDS 914994 915920 . - 0 ID=cds-MHV1764861.1;Parent=gene-AC3ASX_05195;Dbxref=NCBI_GP:MHV1764861.1;Name=MHV1764861.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922782.1;locus_tag=AC3ASX_05195;product=PLP-dependent cysteine synthase family protein;protein_id=MHV1764861.1;transl_table=11 JBYLIA010000001.1 Genbank gene 916132 916257 . - . ID=gene-AC3ASX_05200;Name=AC3ASX_05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05200 JBYLIA010000001.1 GeneMarkS-2+ CDS 916132 916257 . - 0 ID=cds-MHV1764862.1;Parent=gene-AC3ASX_05200;Dbxref=NCBI_GP:MHV1764862.1;Name=MHV1764862.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05200;product=hypothetical protein;protein_id=MHV1764862.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 916350 916826 . - . ID=gene-AC3ASX_05205;Name=AC3ASX_05205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05205;pseudo=true JBYLIA010000001.1 Protein Homology CDS 916350 916826 . - 0 ID=cds-AC3ASX_05205;Parent=gene-AC3ASX_05205;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922784.1;locus_tag=AC3ASX_05205;product=linear amide C-N hydrolase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 916905 917738 . + . ID=gene-AC3ASX_05210;Name=AC3ASX_05210;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05210;pseudo=true JBYLIA010000001.1 Protein Homology CDS 916905 917738 . + 0 ID=cds-AC3ASX_05210;Parent=gene-AC3ASX_05210;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037101.1;locus_tag=AC3ASX_05210;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 918116 919468 . - . ID=gene-AC3ASX_05215;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=AC3ASX_05215 JBYLIA010000001.1 Protein Homology CDS 918116 919468 . - 0 ID=cds-MHV1764863.1;Parent=gene-AC3ASX_05215;Dbxref=NCBI_GP:MHV1764863.1;Name=MHV1764863.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021964.1;locus_tag=AC3ASX_05215;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=MHV1764863.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 919471 919717 . - . ID=gene-AC3ASX_05220;Name=AC3ASX_05220;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05220;pseudo=true JBYLIA010000001.1 Protein Homology CDS 919471 919717 . - 0 ID=cds-AC3ASX_05220;Parent=gene-AC3ASX_05220;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339685.1;locus_tag=AC3ASX_05220;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 919836 920132 . + . ID=gene-AC3ASX_05225;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=AC3ASX_05225 JBYLIA010000001.1 Protein Homology CDS 919836 920132 . + 0 ID=cds-MHV1764864.1;Parent=gene-AC3ASX_05225;Dbxref=NCBI_GP:MHV1764864.1;Name=MHV1764864.1;Ontology_term=GO:0045182,GO:0005840;gbkey=CDS;gene=hpf;go_component=ribosome|0005840||IEA;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034470.1;locus_tag=AC3ASX_05225;product=ribosome hibernation-promoting factor%2C HPF/YfiA family;protein_id=MHV1764864.1;transl_table=11 JBYLIA010000001.1 Genbank gene 920170 920625 . + . ID=gene-AC3ASX_05230;Name=AC3ASX_05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05230 JBYLIA010000001.1 Protein Homology CDS 920170 920625 . + 0 ID=cds-MHV1764865.1;Parent=gene-AC3ASX_05230;Dbxref=NCBI_GP:MHV1764865.1;Name=MHV1764865.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016241.1;locus_tag=AC3ASX_05230;product=PTS sugar transporter subunit IIA;protein_id=MHV1764865.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 920618 921380 . + . ID=gene-AC3ASX_05235;Name=AC3ASX_05235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05235;pseudo=true JBYLIA010000001.1 Protein Homology CDS 920618 921380 . + 0 ID=cds-AC3ASX_05235;Parent=gene-AC3ASX_05235;Note=frameshifted;Ontology_term=GO:0006396,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004337270.1;locus_tag=AC3ASX_05235;product=RNA methyltransferase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 921383 921922 . + . ID=gene-AC3ASX_05240;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=pseudogene;locus_tag=AC3ASX_05240;pseudo=true JBYLIA010000001.1 Protein Homology CDS 921383 921922 . + 0 ID=cds-AC3ASX_05240;Parent=gene-AC3ASX_05240;Note=frameshifted%3B internal stop;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550034.1;locus_tag=AC3ASX_05240;product=ribonuclease HII;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 921924 922973 . + . ID=gene-AC3ASX_05245;Name=AC3ASX_05245;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05245;pseudo=true JBYLIA010000001.1 Protein Homology CDS 921924 922973 . + 0 ID=cds-AC3ASX_05245;Parent=gene-AC3ASX_05245;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339680.1;locus_tag=AC3ASX_05245;product=sodium:solute symporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 922970 923377 . - . ID=gene-AC3ASX_05250;Name=mglB;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=AC3ASX_05250 JBYLIA010000001.1 Protein Homology CDS 922970 923377 . - 0 ID=cds-MHV1764866.1;Parent=gene-AC3ASX_05250;Dbxref=NCBI_GP:MHV1764866.1;Name=MHV1764866.1;gbkey=CDS;gene=mglB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021949.1;locus_tag=AC3ASX_05250;product=transcriptional regulator MglB;protein_id=MHV1764866.1;transl_table=11 JBYLIA010000001.1 Genbank gene 923364 923996 . - . ID=gene-AC3ASX_05255;Name=mglA;gbkey=Gene;gene=mglA;gene_biotype=protein_coding;locus_tag=AC3ASX_05255 JBYLIA010000001.1 Protein Homology CDS 923364 923996 . - 0 ID=cds-MHV1764867.1;Parent=gene-AC3ASX_05255;Dbxref=NCBI_GP:MHV1764867.1;Name=MHV1764867.1;gbkey=CDS;gene=mglA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034461.1;locus_tag=AC3ASX_05255;product=transcriptional regulator MglA;protein_id=MHV1764867.1;transl_table=11 JBYLIA010000001.1 Genbank gene 924050 924439 . - . ID=gene-AC3ASX_05260;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=AC3ASX_05260 JBYLIA010000001.1 Protein Homology CDS 924050 924439 . - 0 ID=cds-MHV1764868.1;Parent=gene-AC3ASX_05260;Dbxref=NCBI_GP:MHV1764868.1;Name=MHV1764868.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025459.1;locus_tag=AC3ASX_05260;product=30S ribosomal protein S9;protein_id=MHV1764868.1;transl_table=11 JBYLIA010000001.1 Genbank gene 924454 924882 . - . ID=gene-AC3ASX_05265;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=AC3ASX_05265 JBYLIA010000001.1 Protein Homology CDS 924454 924882 . - 0 ID=cds-MHV1764869.1;Parent=gene-AC3ASX_05265;Dbxref=NCBI_GP:MHV1764869.1;Name=MHV1764869.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714547.1;locus_tag=AC3ASX_05265;product=50S ribosomal protein L13;protein_id=MHV1764869.1;transl_table=11 JBYLIA010000001.1 Genbank gene 925021 926205 . - . ID=gene-AC3ASX_05270;Name=AC3ASX_05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05270 JBYLIA010000001.1 Protein Homology CDS 925021 926205 . - 0 ID=cds-MHV1764870.1;Parent=gene-AC3ASX_05270;Dbxref=NCBI_GP:MHV1764870.1;Name=MHV1764870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021938.1;locus_tag=AC3ASX_05270;product=NAD(P)-binding protein;protein_id=MHV1764870.1;transl_table=11 JBYLIA010000001.1 Genbank gene 926198 927349 . - . ID=gene-AC3ASX_05275;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=AC3ASX_05275 JBYLIA010000001.1 Protein Homology CDS 926198 927349 . - 0 ID=cds-MHV1764871.1;Parent=gene-AC3ASX_05275;Dbxref=NCBI_GP:MHV1764871.1;Name=MHV1764871.1;Ontology_term=GO:0000270,GO:0008933,GO:0030288;gbkey=CDS;gene=mltA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016255.1;locus_tag=AC3ASX_05275;product=murein transglycosylase A;protein_id=MHV1764871.1;transl_table=11 JBYLIA010000001.1 Genbank gene 927455 928042 . + . ID=gene-AC3ASX_05280;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=AC3ASX_05280 JBYLIA010000001.1 Protein Homology CDS 927455 928042 . + 0 ID=cds-MHV1764872.1;Parent=gene-AC3ASX_05280;Dbxref=NCBI_GP:MHV1764872.1;Name=MHV1764872.1;gbkey=CDS;gene=grpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016259.1;locus_tag=AC3ASX_05280;product=nucleotide exchange factor GrpE;protein_id=MHV1764872.1;transl_table=11 JBYLIA010000001.1 Genbank gene 928135 930066 . + . ID=gene-AC3ASX_05285;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=AC3ASX_05285 JBYLIA010000001.1 Protein Homology CDS 928135 930066 . + 0 ID=cds-MHV1764873.1;Parent=gene-AC3ASX_05285;Dbxref=NCBI_GP:MHV1764873.1;Name=MHV1764873.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007144424.1;locus_tag=AC3ASX_05285;product=molecular chaperone DnaK;protein_id=MHV1764873.1;transl_table=11 JBYLIA010000001.1 Genbank gene 930151 931272 . + . ID=gene-AC3ASX_05290;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=AC3ASX_05290 JBYLIA010000001.1 Protein Homology CDS 930151 931272 . + 0 ID=cds-MHV1764874.1;Parent=gene-AC3ASX_05290;Dbxref=NCBI_GP:MHV1764874.1;Name=MHV1764874.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011457462.1;locus_tag=AC3ASX_05290;product=molecular chaperone DnaJ;protein_id=MHV1764874.1;transl_table=11 JBYLIA010000001.1 Genbank gene 931969 932124 . + . ID=gene-AC3ASX_05295;Name=AC3ASX_05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05295 JBYLIA010000001.1 GeneMarkS-2+ CDS 931969 932124 . + 0 ID=cds-MHV1764875.1;Parent=gene-AC3ASX_05295;Dbxref=NCBI_GP:MHV1764875.1;Name=MHV1764875.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05295;product=hypothetical protein;protein_id=MHV1764875.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 932413 932839 . - . ID=gene-AC3ASX_05300;Name=AC3ASX_05300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05300;pseudo=true JBYLIA010000001.1 Protein Homology CDS 932413 932839 . - 0 ID=cds-AC3ASX_05300;Parent=gene-AC3ASX_05300;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550028.1;locus_tag=AC3ASX_05300;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 932944 933694 . - . ID=gene-AC3ASX_05305;Name=nadE;gbkey=Gene;gene=nadE;gene_biotype=pseudogene;locus_tag=AC3ASX_05305;pseudo=true JBYLIA010000001.1 Protein Homology CDS 932944 933694 . - 0 ID=cds-AC3ASX_05305;Parent=gene-AC3ASX_05305;Note=frameshifted%3B internal stop;Ontology_term=GO:0009435,GO:0008795,GO:0005737;gbkey=CDS;gene=nadE;go_component=cytoplasm|0005737||IEA;go_function=NAD+ synthase activity|0008795||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548640.1;locus_tag=AC3ASX_05305;product=NAD(+) synthase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 933823 935308 . - . ID=gene-AC3ASX_05310;Name=AC3ASX_05310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05310;pseudo=true JBYLIA010000001.1 Protein Homology CDS 933823 935308 . - 0 ID=cds-AC3ASX_05310;Parent=gene-AC3ASX_05310;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018447.1;locus_tag=AC3ASX_05310;product=TolC family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 935321 936304 . - . ID=gene-AC3ASX_05315;Name=AC3ASX_05315;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05315;pseudo=true JBYLIA010000001.1 Protein Homology CDS 935321 936304 . - 0 ID=cds-AC3ASX_05315;Parent=gene-AC3ASX_05315;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429594.1;locus_tag=AC3ASX_05315;product=HlyD family secretion protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 936325 937856 . - . ID=gene-AC3ASX_05320;Name=AC3ASX_05320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05320;pseudo=true JBYLIA010000001.1 Protein Homology CDS 936325 937856 . - 0 ID=cds-AC3ASX_05320;Parent=gene-AC3ASX_05320;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011457408.1;locus_tag=AC3ASX_05320;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 938002 938819 . + . ID=gene-AC3ASX_05325;Name=AC3ASX_05325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05325;pseudo=true JBYLIA010000001.1 Protein Homology CDS 938002 938819 . + 0 ID=cds-AC3ASX_05325;Parent=gene-AC3ASX_05325;Note=frameshifted%3B internal stop;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011648653.1;locus_tag=AC3ASX_05325;product=AraC family transcriptional regulator;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 938807 940498 . - . ID=gene-AC3ASX_05330;Name=AC3ASX_05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05330 JBYLIA010000001.1 Protein Homology CDS 938807 940498 . - 0 ID=cds-MHV1764876.1;Parent=gene-AC3ASX_05330;Dbxref=NCBI_GP:MHV1764876.1;Name=MHV1764876.1;Ontology_term=GO:0006631,GO:0004467,GO:0005524,GO:0120225;gbkey=CDS;go_function=long-chain fatty acid-CoA ligase activity|0004467||IEA,ATP binding|0005524||IEA,coenzyme A binding|0120225||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550025.1;locus_tag=AC3ASX_05330;product=long-chain-fatty-acid--CoA ligase;protein_id=MHV1764876.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 940604 941148 . - . ID=gene-AC3ASX_05335;Name=AC3ASX_05335;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05335;pseudo=true JBYLIA010000001.1 Protein Homology CDS 940604 941148 . - 0 ID=cds-AC3ASX_05335;Parent=gene-AC3ASX_05335;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025721.1;locus_tag=AC3ASX_05335;product=POT-type proton-dependent oligopeptide transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 941216 941872 . - . ID=gene-AC3ASX_05340;Name=AC3ASX_05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05340 JBYLIA010000001.1 Protein Homology CDS 941216 941872 . - 0 ID=cds-MHV1764877.1;Parent=gene-AC3ASX_05340;Dbxref=NCBI_GP:MHV1764877.1;Name=MHV1764877.1;Ontology_term=GO:0032259,GO:0003723,GO:0008173,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: protein motif:HMM:TIGR00046.1;locus_tag=AC3ASX_05340;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=MHV1764877.1;transl_table=11 JBYLIA010000001.1 Genbank gene 942013 942702 . + . ID=gene-AC3ASX_05345;Name=AC3ASX_05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05345 JBYLIA010000001.1 Protein Homology CDS 942013 942702 . + 0 ID=cds-MHV1764878.1;Parent=gene-AC3ASX_05345;Dbxref=NCBI_GP:MHV1764878.1;Name=MHV1764878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550023.1;locus_tag=AC3ASX_05345;product=DUF445 family protein;protein_id=MHV1764878.1;transl_table=11 JBYLIA010000001.1 Genbank gene 942692 943390 . - . ID=gene-AC3ASX_05350;Name=AC3ASX_05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05350 JBYLIA010000001.1 Protein Homology CDS 942692 943390 . - 0 ID=cds-MHV1764879.1;Parent=gene-AC3ASX_05350;Dbxref=NCBI_GP:MHV1764879.1;Name=MHV1764879.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548631.1;locus_tag=AC3ASX_05350;product=hypothetical protein;protein_id=MHV1764879.1;transl_table=11 JBYLIA010000001.1 Genbank gene 943395 944120 . - . ID=gene-AC3ASX_05355;Name=AC3ASX_05355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05355 JBYLIA010000001.1 Protein Homology CDS 943395 944120 . - 0 ID=cds-MHV1764880.1;Parent=gene-AC3ASX_05355;Dbxref=NCBI_GP:MHV1764880.1;Name=MHV1764880.1;Ontology_term=GO:0015914;gbkey=CDS;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429600.1;locus_tag=AC3ASX_05355;product=MlaD family protein;protein_id=MHV1764880.1;transl_table=11 JBYLIA010000001.1 Genbank gene 944130 944891 . - . ID=gene-AC3ASX_05360;Name=AC3ASX_05360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05360 JBYLIA010000001.1 Protein Homology CDS 944130 944891 . - 0 ID=cds-MHV1764881.1;Parent=gene-AC3ASX_05360;Dbxref=NCBI_GP:MHV1764881.1;Name=MHV1764881.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339641.1;locus_tag=AC3ASX_05360;product=ABC transporter ATP-binding protein;protein_id=MHV1764881.1;transl_table=11 JBYLIA010000001.1 Genbank gene 944906 946006 . - . ID=gene-AC3ASX_05365;Name=AC3ASX_05365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05365 JBYLIA010000001.1 Protein Homology CDS 944906 946006 . - 0 ID=cds-MHV1764882.1;Parent=gene-AC3ASX_05365;Dbxref=NCBI_GP:MHV1764882.1;Name=MHV1764882.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037073.1;locus_tag=AC3ASX_05365;product=MlaE family ABC transporter permease;protein_id=MHV1764882.1;transl_table=11 JBYLIA010000001.1 Genbank gene 946082 946894 . - . ID=gene-AC3ASX_05370;Name=AC3ASX_05370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05370 JBYLIA010000001.1 Protein Homology CDS 946082 946894 . - 0 ID=cds-MHV1764883.1;Parent=gene-AC3ASX_05370;Dbxref=NCBI_GP:MHV1764883.1;Name=MHV1764883.1;Ontology_term=GO:0004040;gbkey=CDS;go_function=amidase activity|0004040||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004578502.1;locus_tag=AC3ASX_05370;product=glucosaminidase domain-containing protein;protein_id=MHV1764883.1;transl_table=11 JBYLIA010000001.1 Genbank gene 946872 947867 . - . ID=gene-AC3ASX_05375;Name=AC3ASX_05375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05375 JBYLIA010000001.1 Protein Homology CDS 946872 947867 . - 0 ID=cds-MHV1764884.1;Parent=gene-AC3ASX_05375;Dbxref=NCBI_GP:MHV1764884.1;Name=MHV1764884.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025732.1;locus_tag=AC3ASX_05375;product=RluA family pseudouridine synthase;protein_id=MHV1764884.1;transl_table=11 JBYLIA010000001.1 Genbank gene 947955 948779 . + . ID=gene-AC3ASX_05380;Name=AC3ASX_05380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05380 JBYLIA010000001.1 Protein Homology CDS 947955 948779 . + 0 ID=cds-MHV1764885.1;Parent=gene-AC3ASX_05380;Dbxref=NCBI_GP:MHV1764885.1;Name=MHV1764885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287444.1;locus_tag=AC3ASX_05380;product=outer membrane protein assembly factor BamD;protein_id=MHV1764885.1;transl_table=11 JBYLIA010000001.1 Genbank gene 949097 949219 . + . ID=gene-AC3ASX_05385;Name=AC3ASX_05385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05385 JBYLIA010000001.1 GeneMarkS-2+ CDS 949097 949219 . + 0 ID=cds-MHV1764886.1;Parent=gene-AC3ASX_05385;Dbxref=NCBI_GP:MHV1764886.1;Name=MHV1764886.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05385;product=hypothetical protein;protein_id=MHV1764886.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 950295 951779 . - . ID=gene-AC3ASX_05390;Name=AC3ASX_05390;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05390;pseudo=true JBYLIA010000001.1 Protein Homology CDS 950295 951779 . - 0 ID=cds-AC3ASX_05390;Parent=gene-AC3ASX_05390;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012118973.1;locus_tag=AC3ASX_05390;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 952047 953300 . - . ID=gene-AC3ASX_05395;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=AC3ASX_05395 JBYLIA010000001.1 Protein Homology CDS 952047 953300 . - 0 ID=cds-MHV1764887.1;Parent=gene-AC3ASX_05395;Dbxref=NCBI_GP:MHV1764887.1;Name=MHV1764887.1;Ontology_term=GO:0006545,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process|0006545||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021543.1;locus_tag=AC3ASX_05395;product=serine hydroxymethyltransferase;protein_id=MHV1764887.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 953402 953957 . + . ID=gene-AC3ASX_05400;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=pseudogene;locus_tag=AC3ASX_05400;pseudo=true JBYLIA010000001.1 Protein Homology CDS 953402 953957 . + 0 ID=cds-AC3ASX_05400;Parent=gene-AC3ASX_05400;Note=frameshifted;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548619.1;locus_tag=AC3ASX_05400;product=ribosome biogenesis factor YjgA;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 953974 955308 . + . ID=gene-AC3ASX_05405;Name=AC3ASX_05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05405 JBYLIA010000001.1 Protein Homology CDS 953974 955308 . + 0 ID=cds-MHV1764888.1;Parent=gene-AC3ASX_05405;Dbxref=NCBI_GP:MHV1764888.1;Name=MHV1764888.1;Ontology_term=GO:0009103,GO:0008754,GO:0008755,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=O-antigen ligase activity|0008754||IEA,O antigen polymerase activity|0008755||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339621.1;locus_tag=AC3ASX_05405;product=O-antigen ligase family protein;protein_id=MHV1764888.1;transl_table=11 JBYLIA010000001.1 Genbank gene 955318 956292 . + . ID=gene-AC3ASX_05410;Name=AC3ASX_05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05410 JBYLIA010000001.1 Protein Homology CDS 955318 956292 . + 0 ID=cds-MHV1764889.1;Parent=gene-AC3ASX_05410;Dbxref=NCBI_GP:MHV1764889.1;Name=MHV1764889.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548617.1;locus_tag=AC3ASX_05410;product=glycosyltransferase family 32 protein;protein_id=MHV1764889.1;transl_table=11 JBYLIA010000001.1 Genbank gene 956313 957221 . - . ID=gene-AC3ASX_05415;Name=AC3ASX_05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05415 JBYLIA010000001.1 Protein Homology CDS 956313 957221 . - 0 ID=cds-MHV1764890.1;Parent=gene-AC3ASX_05415;Dbxref=NCBI_GP:MHV1764890.1;Name=MHV1764890.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011648658.1;locus_tag=AC3ASX_05415;product=glycosyltransferase family 8 protein;protein_id=MHV1764890.1;transl_table=11 JBYLIA010000001.1 Genbank gene 957214 958305 . - . ID=gene-AC3ASX_05420;Name=AC3ASX_05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05420 JBYLIA010000001.1 Protein Homology CDS 957214 958305 . - 0 ID=cds-MHV1764891.1;Parent=gene-AC3ASX_05420;Dbxref=NCBI_GP:MHV1764891.1;Name=MHV1764891.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014367973.1;locus_tag=AC3ASX_05420;product=hypothetical protein;protein_id=MHV1764891.1;transl_table=11 JBYLIA010000001.1 Genbank gene 958488 959558 . + . ID=gene-AC3ASX_05425;Name=AC3ASX_05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05425 JBYLIA010000001.1 Protein Homology CDS 958488 959558 . + 0 ID=cds-MHV1764892.1;Parent=gene-AC3ASX_05425;Dbxref=NCBI_GP:MHV1764892.1;Name=MHV1764892.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548613.1;locus_tag=AC3ASX_05425;product=glycosyltransferase family 4 protein;protein_id=MHV1764892.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 959551 960519 . - . ID=gene-AC3ASX_05430;Name=AC3ASX_05430;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05430;pseudo=true JBYLIA010000001.1 Protein Homology CDS 959551 960519 . - 0 ID=cds-AC3ASX_05430;Parent=gene-AC3ASX_05430;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034404.1;locus_tag=AC3ASX_05430;product=linear amide C-N hydrolase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 960953 961333 . + . ID=gene-AC3ASX_05435;Name=AC3ASX_05435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05435 JBYLIA010000001.1 Protein Homology CDS 960953 961333 . + 0 ID=cds-MHV1764893.1;Parent=gene-AC3ASX_05435;Dbxref=NCBI_GP:MHV1764893.1;Name=MHV1764893.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013050.7;locus_tag=AC3ASX_05435;product=POT-type proton-dependent oligopeptide transporter;protein_id=MHV1764893.1;transl_table=11 JBYLIA010000001.1 Genbank gene 961441 961812 . + . ID=gene-AC3ASX_05440;Name=AC3ASX_05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05440 JBYLIA010000001.1 Protein Homology CDS 961441 961812 . + 0 ID=cds-MHV1764894.1;Parent=gene-AC3ASX_05440;Dbxref=NCBI_GP:MHV1764894.1;Name=MHV1764894.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF013050.7;locus_tag=AC3ASX_05440;product=POT-type proton-dependent oligopeptide transporter;protein_id=MHV1764894.1;transl_table=11 JBYLIA010000001.1 Genbank gene 961953 962120 . + . ID=gene-AC3ASX_05445;Name=AC3ASX_05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05445 JBYLIA010000001.1 GeneMarkS-2+ CDS 961953 962120 . + 0 ID=cds-MHV1764895.1;Parent=gene-AC3ASX_05445;Dbxref=NCBI_GP:MHV1764895.1;Name=MHV1764895.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05445;product=hypothetical protein;protein_id=MHV1764895.1;transl_table=11 JBYLIA010000001.1 Genbank gene 962145 963341 . - . ID=gene-AC3ASX_05450;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=AC3ASX_05450 JBYLIA010000001.1 Protein Homology CDS 962145 963341 . - 0 ID=cds-MHV1764896.1;Parent=gene-AC3ASX_05450;Dbxref=NCBI_GP:MHV1764896.1;Name=MHV1764896.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548610.1;locus_tag=AC3ASX_05450;product=tRNA lysidine(34) synthetase TilS;protein_id=MHV1764896.1;transl_table=11 JBYLIA010000001.1 Genbank gene 963342 964358 . - . ID=gene-AC3ASX_05455;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=AC3ASX_05455 JBYLIA010000001.1 Protein Homology CDS 963342 964358 . - 0 ID=cds-MHV1764897.1;Parent=gene-AC3ASX_05455;Dbxref=NCBI_GP:MHV1764897.1;Name=MHV1764897.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429392.1;locus_tag=AC3ASX_05455;product=phosphoglycerate dehydrogenase;protein_id=MHV1764897.1;transl_table=11 JBYLIA010000001.1 Genbank gene 964369 965193 . - . ID=gene-AC3ASX_05460;Name=AC3ASX_05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05460 JBYLIA010000001.1 Protein Homology CDS 964369 965193 . - 0 ID=cds-MHV1764898.1;Parent=gene-AC3ASX_05460;Dbxref=NCBI_GP:MHV1764898.1;Name=MHV1764898.1;Ontology_term=GO:0006231,GO:0004799;gbkey=CDS;go_function=thymidylate synthase activity|0004799||IEA;go_process=dTMP biosynthetic process|0006231||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025777.1;locus_tag=AC3ASX_05460;product=thymidylate synthase;protein_id=MHV1764898.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 965178 965985 . - . ID=gene-AC3ASX_05465;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=pseudogene;locus_tag=AC3ASX_05465;pseudo=true JBYLIA010000001.1 Protein Homology CDS 965178 965985 . - 0 ID=cds-AC3ASX_05465;Parent=gene-AC3ASX_05465;Note=frameshifted;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548607.1;locus_tag=AC3ASX_05465;product=prolipoprotein diacylglyceryl transferase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 966000 968546 . - . ID=gene-AC3ASX_05470;Name=AC3ASX_05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05470 JBYLIA010000001.1 Protein Homology CDS 966000 968546 . - 0 ID=cds-MHV1764899.1;Parent=gene-AC3ASX_05470;Dbxref=NCBI_GP:MHV1764899.1;Name=MHV1764899.1;Ontology_term=GO:0006396,GO:0006397,GO:0003723,GO:0004519,GO:0004540,GO:0046872;gbkey=CDS;go_function=RNA binding|0003723||IEA,endonuclease activity|0004519||IEA,RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=RNA processing|0006396||IEA,mRNA processing|0006397||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037043.1;locus_tag=AC3ASX_05470;product=Rne/Rng family ribonuclease;protein_id=MHV1764899.1;transl_table=11 JBYLIA010000001.1 Genbank gene 968796 969971 . + . ID=gene-AC3ASX_05475;Name=AC3ASX_05475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05475 JBYLIA010000001.1 Protein Homology CDS 968796 969971 . + 0 ID=cds-MHV1764900.1;Parent=gene-AC3ASX_05475;Dbxref=NCBI_GP:MHV1764900.1;Name=MHV1764900.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003039983.1;locus_tag=AC3ASX_05475;product=cysteine desulfurase family protein;protein_id=MHV1764900.1;transl_table=11 JBYLIA010000001.1 Genbank gene 969964 970293 . + . ID=gene-AC3ASX_05480;Name=AC3ASX_05480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05480 JBYLIA010000001.1 Protein Homology CDS 969964 970293 . + 0 ID=cds-MHV1764901.1;Parent=gene-AC3ASX_05480;Dbxref=NCBI_GP:MHV1764901.1;Name=MHV1764901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025792.1;locus_tag=AC3ASX_05480;product=hypothetical protein;protein_id=MHV1764901.1;transl_table=11 JBYLIA010000001.1 Genbank gene 970277 970975 . + . ID=gene-AC3ASX_05485;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=AC3ASX_05485 JBYLIA010000001.1 Protein Homology CDS 970277 970975 . + 0 ID=cds-MHV1764902.1;Parent=gene-AC3ASX_05485;Dbxref=NCBI_GP:MHV1764902.1;Name=MHV1764902.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003039979.1;locus_tag=AC3ASX_05485;product=DNA repair protein RecO;protein_id=MHV1764902.1;transl_table=11 JBYLIA010000001.1 Genbank gene 971154 971804 . - . ID=gene-AC3ASX_05490;Name=AC3ASX_05490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05490 JBYLIA010000001.1 Protein Homology CDS 971154 971804 . - 0 ID=cds-MHV1764903.1;Parent=gene-AC3ASX_05490;Dbxref=NCBI_GP:MHV1764903.1;Name=MHV1764903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021502.1;locus_tag=AC3ASX_05490;product=VTT domain-containing protein;protein_id=MHV1764903.1;transl_table=11 JBYLIA010000001.1 Genbank gene 971860 972486 . - . ID=gene-AC3ASX_05495;Name=AC3ASX_05495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05495 JBYLIA010000001.1 Protein Homology CDS 971860 972486 . - 0 ID=cds-MHV1764904.1;Parent=gene-AC3ASX_05495;Dbxref=NCBI_GP:MHV1764904.1;Name=MHV1764904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037035.1;locus_tag=AC3ASX_05495;product=VTT domain-containing protein;protein_id=MHV1764904.1;transl_table=11 JBYLIA010000001.1 Genbank gene 972493 972759 . - . ID=gene-AC3ASX_05500;Name=AC3ASX_05500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05500 JBYLIA010000001.1 Protein Homology CDS 972493 972759 . - 0 ID=cds-MHV1764905.1;Parent=gene-AC3ASX_05500;Dbxref=NCBI_GP:MHV1764905.1;Name=MHV1764905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548600.1;locus_tag=AC3ASX_05500;product=BolA/IbaG family iron-sulfur metabolism protein;protein_id=MHV1764905.1;transl_table=11 JBYLIA010000001.1 Genbank gene 972762 973310 . - . ID=gene-AC3ASX_05505;Name=AC3ASX_05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05505 JBYLIA010000001.1 Protein Homology CDS 972762 973310 . - 0 ID=cds-MHV1764906.1;Parent=gene-AC3ASX_05505;Dbxref=NCBI_GP:MHV1764906.1;Name=MHV1764906.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429396.1;locus_tag=AC3ASX_05505;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=MHV1764906.1;transl_table=11 JBYLIA010000001.1 Genbank gene 973330 973527 . - . ID=gene-AC3ASX_05510;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=AC3ASX_05510 JBYLIA010000001.1 cmsearch ncRNA 973330 973527 . - . ID=rna-AC3ASX_05510;Parent=gene-AC3ASX_05510;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_05510;product=6S RNA JBYLIA010000001.1 cmsearch exon 973330 973527 . - . ID=exon-AC3ASX_05510-1;Parent=rna-AC3ASX_05510;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_05510;product=6S RNA JBYLIA010000001.1 Genbank gene 973781 974335 . + . ID=gene-AC3ASX_05515;Name=AC3ASX_05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05515 JBYLIA010000001.1 Protein Homology CDS 973781 974335 . + 0 ID=cds-MHV1764907.1;Parent=gene-AC3ASX_05515;Dbxref=NCBI_GP:MHV1764907.1;Name=MHV1764907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037032.1;locus_tag=AC3ASX_05515;product=UPF0149 family protein;protein_id=MHV1764907.1;transl_table=11 JBYLIA010000001.1 Genbank gene 974325 975536 . + . ID=gene-AC3ASX_05520;Name=AC3ASX_05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05520 JBYLIA010000001.1 Protein Homology CDS 974325 975536 . + 0 ID=cds-MHV1764908.1;Parent=gene-AC3ASX_05520;Dbxref=NCBI_GP:MHV1764908.1;Name=MHV1764908.1;Ontology_term=GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429398.1;locus_tag=AC3ASX_05520;product=FAD-dependent monooxygenase;protein_id=MHV1764908.1;transl_table=11 JBYLIA010000001.1 Genbank gene 975526 976707 . + . ID=gene-AC3ASX_05525;Name=AC3ASX_05525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05525 JBYLIA010000001.1 Protein Homology CDS 975526 976707 . + 0 ID=cds-MHV1764909.1;Parent=gene-AC3ASX_05525;Dbxref=NCBI_GP:MHV1764909.1;Name=MHV1764909.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549999.1;locus_tag=AC3ASX_05525;product=UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase;protein_id=MHV1764909.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 976730 977158 . + . ID=gene-AC3ASX_05530;Name=AC3ASX_05530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05530;pseudo=true JBYLIA010000001.1 Protein Homology CDS 976730 977158 . + 0 ID=cds-AC3ASX_05530;Parent=gene-AC3ASX_05530;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339590.1;locus_tag=AC3ASX_05530;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 977184 978204 . + . ID=gene-AC3ASX_05535;Name=queA;gbkey=Gene;gene=queA;gene_biotype=pseudogene;locus_tag=AC3ASX_05535;pseudo=true JBYLIA010000001.1 Protein Homology CDS 977184 978204 . + 0 ID=cds-AC3ASX_05535;Parent=gene-AC3ASX_05535;Note=frameshifted;Ontology_term=GO:0016740,GO:0016853;gbkey=CDS;gene=queA;go_function=transferase activity|0016740||IEA,isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025806.1;locus_tag=AC3ASX_05535;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 978310 979092 . + . ID=gene-AC3ASX_05540;Name=AC3ASX_05540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05540;pseudo=true JBYLIA010000001.1 Protein Homology CDS 978310 979092 . + 0 ID=cds-AC3ASX_05540;Parent=gene-AC3ASX_05540;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003039965.1;locus_tag=AC3ASX_05540;product=HAD hydrolase family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 979465 979590 . + . ID=gene-AC3ASX_05545;Name=AC3ASX_05545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05545 JBYLIA010000001.1 GeneMarkS-2+ CDS 979465 979590 . + 0 ID=cds-MHV1764910.1;Parent=gene-AC3ASX_05545;Dbxref=NCBI_GP:MHV1764910.1;Name=MHV1764910.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05545;product=hypothetical protein;protein_id=MHV1764910.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 979845 980554 . - . ID=gene-AC3ASX_05550;Name=AC3ASX_05550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05550;pseudo=true JBYLIA010000001.1 Protein Homology CDS 979845 980554 . - 0 ID=cds-AC3ASX_05550;Parent=gene-AC3ASX_05550;Note=frameshifted;Ontology_term=GO:0160254;gbkey=CDS;go_process=tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors|0160254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548591.1;locus_tag=AC3ASX_05550;product=queuosine precursor transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 980670 981050 . + . ID=gene-AC3ASX_05555;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=AC3ASX_05555 JBYLIA010000001.1 Protein Homology CDS 980670 981050 . + 0 ID=cds-MHV1764911.1;Parent=gene-AC3ASX_05555;Dbxref=NCBI_GP:MHV1764911.1;Name=MHV1764911.1;Ontology_term=GO:0051596,GO:0004462,GO:0046872;gbkey=CDS;gene=gloA;go_function=lactoylglutathione lyase activity|0004462||IEA,metal ion binding|0046872||IEA;go_process=methylglyoxal catabolic process|0051596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549993.1;locus_tag=AC3ASX_05555;product=lactoylglutathione lyase;protein_id=MHV1764911.1;transl_table=11 JBYLIA010000001.1 Genbank gene 981256 981489 . + . ID=gene-AC3ASX_05560;Name=AC3ASX_05560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05560 JBYLIA010000001.1 GeneMarkS-2+ CDS 981256 981489 . + 0 ID=cds-MHV1764912.1;Parent=gene-AC3ASX_05560;Dbxref=NCBI_GP:MHV1764912.1;Name=MHV1764912.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05560;product=hypothetical protein;protein_id=MHV1764912.1;transl_table=11 JBYLIA010000001.1 Genbank gene 981470 981622 . + . ID=gene-AC3ASX_05565;Name=AC3ASX_05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05565 JBYLIA010000001.1 GeneMarkS-2+ CDS 981470 981622 . + 0 ID=cds-MHV1764913.1;Parent=gene-AC3ASX_05565;Dbxref=NCBI_GP:MHV1764913.1;Name=MHV1764913.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05565;product=hypothetical protein;protein_id=MHV1764913.1;transl_table=11 JBYLIA010000001.1 Genbank gene 981611 981856 . - . ID=gene-AC3ASX_05570;Name=AC3ASX_05570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05570 JBYLIA010000001.1 Protein Homology CDS 981611 981856 . - 0 ID=cds-MHV1764914.1;Parent=gene-AC3ASX_05570;Dbxref=NCBI_GP:MHV1764914.1;Name=MHV1764914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548588.1;locus_tag=AC3ASX_05570;product=hypothetical protein;protein_id=MHV1764914.1;transl_table=11 JBYLIA010000001.1 Genbank gene 981867 982580 . - . ID=gene-AC3ASX_05575;Name=AC3ASX_05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05575 JBYLIA010000001.1 Protein Homology CDS 981867 982580 . - 0 ID=cds-MHV1764915.1;Parent=gene-AC3ASX_05575;Dbxref=NCBI_GP:MHV1764915.1;Name=MHV1764915.1;Ontology_term=GO:0009691,GO:0016799;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004337255.1;locus_tag=AC3ASX_05575;product=LOG family protein;protein_id=MHV1764915.1;transl_table=11 JBYLIA010000001.1 Genbank gene 982730 983512 . + . ID=gene-AC3ASX_05580;Name=AC3ASX_05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05580 JBYLIA010000001.1 Protein Homology CDS 982730 983512 . + 0 ID=cds-MHV1764916.1;Parent=gene-AC3ASX_05580;Dbxref=NCBI_GP:MHV1764916.1;Name=MHV1764916.1;Ontology_term=GO:0030497,GO:0004318;gbkey=CDS;go_function=enoyl-[acyl-carrier-protein] reductase (NADH) activity|0004318||IEA;go_process=fatty acid elongation|0030497||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548586.1;locus_tag=AC3ASX_05580;product=enoyl-ACP reductase FabI;protein_id=MHV1764916.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 983659 984619 . + . ID=gene-AC3ASX_05585;Name=AC3ASX_05585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05585;pseudo=true JBYLIA010000001.1 Protein Homology CDS 983659 984619 . + 0 ID=cds-AC3ASX_05585;Parent=gene-AC3ASX_05585;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025486.1;locus_tag=AC3ASX_05585;product=MBL fold metallo-hydrolase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 984631 984964 . + . ID=gene-AC3ASX_05590;Name=AC3ASX_05590;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05590;pseudo=true JBYLIA010000001.1 Protein Homology CDS 984631 984964 . + 0 ID=cds-AC3ASX_05590;Parent=gene-AC3ASX_05590;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016735.1;locus_tag=AC3ASX_05590;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 984971 985805 . + . ID=gene-AC3ASX_05595;Name=AC3ASX_05595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05595;pseudo=true JBYLIA010000001.1 Protein Homology CDS 984971 985805 . + 0 ID=cds-AC3ASX_05595;Parent=gene-AC3ASX_05595;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280801.1;locus_tag=AC3ASX_05595;product=MbnB/TglH/ChrH family RiPP precursor modification enzyme;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 985807 985968 . + . ID=gene-AC3ASX_05600;Name=AC3ASX_05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05600 JBYLIA010000001.1 GeneMarkS-2+ CDS 985807 985968 . + 0 ID=cds-MHV1764917.1;Parent=gene-AC3ASX_05600;Dbxref=NCBI_GP:MHV1764917.1;Name=MHV1764917.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05600;product=hypothetical protein;protein_id=MHV1764917.1;transl_table=11 JBYLIA010000001.1 Genbank gene 986014 986184 . + . ID=gene-AC3ASX_05605;Name=AC3ASX_05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05605 JBYLIA010000001.1 GeneMarkS-2+ CDS 986014 986184 . + 0 ID=cds-MHV1764918.1;Parent=gene-AC3ASX_05605;Dbxref=NCBI_GP:MHV1764918.1;Name=MHV1764918.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05605;product=hypothetical protein;protein_id=MHV1764918.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 986305 986862 . + . ID=gene-AC3ASX_05610;Name=AC3ASX_05610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05610;pseudo=true JBYLIA010000001.1 Protein Homology CDS 986305 986862 . + 0 ID=cds-AC3ASX_05610;Parent=gene-AC3ASX_05610;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004337250.1;locus_tag=AC3ASX_05610;product=HvfX family Cu-binding RiPP maturation protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 986887 987858 . - . ID=gene-AC3ASX_05615;Name=AC3ASX_05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05615 JBYLIA010000001.1 Protein Homology CDS 986887 987858 . - 0 ID=cds-MHV1764919.1;Parent=gene-AC3ASX_05615;Dbxref=NCBI_GP:MHV1764919.1;Name=MHV1764919.1;Ontology_term=GO:0005975,GO:0016853,GO:0046872,GO:0097367;gbkey=CDS;go_function=isomerase activity|0016853||IEA,metal ion binding|0046872||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034370.1;locus_tag=AC3ASX_05615;product=KpsF/GutQ family sugar-phosphate isomerase;protein_id=MHV1764919.1;transl_table=11 JBYLIA010000001.1 Genbank gene 988009 988677 . + . ID=gene-AC3ASX_05620;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=AC3ASX_05620 JBYLIA010000001.1 Protein Homology CDS 988009 988677 . + 0 ID=cds-MHV1764920.1;Parent=gene-AC3ASX_05620;Dbxref=NCBI_GP:MHV1764920.1;Name=MHV1764920.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020688.1;locus_tag=AC3ASX_05620;product=ribulose-phosphate 3-epimerase;protein_id=MHV1764920.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 988658 990051 . + . ID=gene-AC3ASX_05625;Name=AC3ASX_05625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05625;pseudo=true JBYLIA010000001.1 Protein Homology CDS 988658 990051 . + 0 ID=cds-AC3ASX_05625;Parent=gene-AC3ASX_05625;Note=frameshifted;Ontology_term=GO:0016740,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037006.1;locus_tag=AC3ASX_05625;product=sugar transferase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 990044 991063 . + . ID=gene-AC3ASX_05630;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=AC3ASX_05630 JBYLIA010000001.1 Protein Homology CDS 990044 991063 . + 0 ID=cds-MHV1764921.1;Parent=gene-AC3ASX_05630;Dbxref=NCBI_GP:MHV1764921.1;Name=MHV1764921.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025501.1;locus_tag=AC3ASX_05630;product=UDP-glucose 4-epimerase GalE;protein_id=MHV1764921.1;transl_table=11 JBYLIA010000001.1 Genbank gene 991063 991269 . + . ID=gene-AC3ASX_05635;Name=AC3ASX_05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05635 JBYLIA010000001.1 GeneMarkS-2+ CDS 991063 991269 . + 0 ID=cds-MHV1764922.1;Parent=gene-AC3ASX_05635;Dbxref=NCBI_GP:MHV1764922.1;Name=MHV1764922.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05635;product=hypothetical protein;protein_id=MHV1764922.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 991677 991999 . + . ID=gene-AC3ASX_05640;Name=AC3ASX_05640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05640;pseudo=true JBYLIA010000001.1 Protein Homology CDS 991677 991999 . + 0 ID=cds-AC3ASX_05640;Parent=gene-AC3ASX_05640;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF012744.7;locus_tag=AC3ASX_05640;product=glycosyltransferase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 992012 992176 . + . ID=gene-AC3ASX_05645;Name=AC3ASX_05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05645 JBYLIA010000001.1 GeneMarkS-2+ CDS 992012 992176 . + 0 ID=cds-MHV1764923.1;Parent=gene-AC3ASX_05645;Dbxref=NCBI_GP:MHV1764923.1;Name=MHV1764923.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05645;product=hypothetical protein;protein_id=MHV1764923.1;transl_table=11 JBYLIA010000001.1 Genbank gene 992231 992818 . + . ID=gene-AC3ASX_05650;Name=AC3ASX_05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05650 JBYLIA010000001.1 Protein Homology CDS 992231 992818 . + 0 ID=cds-MHV1764924.1;Parent=gene-AC3ASX_05650;Dbxref=NCBI_GP:MHV1764924.1;Name=MHV1764924.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF014051.7;locus_tag=AC3ASX_05650;product=oligosaccharide flippase family protein;protein_id=MHV1764924.1;transl_table=11 JBYLIA010000001.1 Genbank gene 992924 993310 . + . ID=gene-AC3ASX_05655;Name=AC3ASX_05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05655 JBYLIA010000001.1 GeneMarkS-2+ CDS 992924 993310 . + 0 ID=cds-MHV1764925.1;Parent=gene-AC3ASX_05655;Dbxref=NCBI_GP:MHV1764925.1;Name=MHV1764925.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05655;product=hypothetical protein;protein_id=MHV1764925.1;transl_table=11 JBYLIA010000001.1 Genbank gene 993948 994013 . + . ID=gene-AC3ASX_05660;Name=AC3ASX_05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05660 JBYLIA010000001.1 Protein Homology CDS 993948 994013 . + 0 ID=cds-MHV1764926.1;Parent=gene-AC3ASX_05660;Dbxref=NCBI_GP:MHV1764926.1;Name=MHV1764926.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016908.8;locus_tag=AC3ASX_05660;product=hypothetical protein;protein_id=MHV1764926.1;transl_table=11 JBYLIA010000001.1 Genbank gene 994173 994772 . + . ID=gene-AC3ASX_05665;Name=AC3ASX_05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05665 JBYLIA010000001.1 Protein Homology CDS 994173 994772 . + 0 ID=cds-MHV1764927.1;Parent=gene-AC3ASX_05665;Dbxref=NCBI_GP:MHV1764927.1;Name=MHV1764927.1;Ontology_term=GO:0006065,GO:0045227,GO:0003979,GO:0051287;gbkey=CDS;go_function=UDP-glucose 6-dehydrogenase activity|0003979||IEA,NAD binding|0051287||IEA;go_process=UDP-glucuronate biosynthetic process|0006065||IEA,capsule polysaccharide biosynthetic process|0045227||IEA;inference=COORDINATES: protein motif:HMM:NF015666.8;locus_tag=AC3ASX_05665;product=UDP-glucose 6-dehydrogenase family protein;protein_id=MHV1764927.1;transl_table=11 JBYLIA010000001.1 Genbank gene 994699 995325 . + . ID=gene-AC3ASX_05670;Name=AC3ASX_05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05670 JBYLIA010000001.1 Protein Homology CDS 994699 995325 . + 0 ID=cds-MHV1764928.1;Parent=gene-AC3ASX_05670;Dbxref=NCBI_GP:MHV1764928.1;Name=MHV1764928.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: protein motif:HMM:NF013175.7;locus_tag=AC3ASX_05670;product=UDP binding domain-containing protein;protein_id=MHV1764928.1;transl_table=11 JBYLIA010000001.1 Genbank gene 996005 996241 . + . ID=gene-AC3ASX_05675;Name=AC3ASX_05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05675 JBYLIA010000001.1 GeneMarkS-2+ CDS 996005 996241 . + 0 ID=cds-MHV1764929.1;Parent=gene-AC3ASX_05675;Dbxref=NCBI_GP:MHV1764929.1;Name=MHV1764929.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05675;product=hypothetical protein;protein_id=MHV1764929.1;transl_table=11 JBYLIA010000001.1 Genbank gene 996498 996794 . + . ID=gene-AC3ASX_05680;Name=AC3ASX_05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05680 JBYLIA010000001.1 GeneMarkS-2+ CDS 996498 996794 . + 0 ID=cds-MHV1764930.1;Parent=gene-AC3ASX_05680;Dbxref=NCBI_GP:MHV1764930.1;Name=MHV1764930.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05680;product=class I SAM-dependent methyltransferase;protein_id=MHV1764930.1;transl_table=11 JBYLIA010000001.1 Genbank gene 997626 998114 . + . ID=gene-AC3ASX_05685;Name=AC3ASX_05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05685 JBYLIA010000001.1 Protein Homology CDS 997626 998114 . + 0 ID=cds-MHV1764931.1;Parent=gene-AC3ASX_05685;Dbxref=NCBI_GP:MHV1764931.1;Name=MHV1764931.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025072.7;locus_tag=AC3ASX_05685;product=glycosyltransferase;protein_id=MHV1764931.1;transl_table=11 JBYLIA010000001.1 Genbank gene 998313 998621 . + . ID=gene-AC3ASX_05690;Name=AC3ASX_05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05690 JBYLIA010000001.1 Protein Homology CDS 998313 998621 . + 0 ID=cds-MHV1764932.1;Parent=gene-AC3ASX_05690;Dbxref=NCBI_GP:MHV1764932.1;Name=MHV1764932.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.7;locus_tag=AC3ASX_05690;product=glycosyltransferase;protein_id=MHV1764932.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 999369 999844 . + . ID=gene-AC3ASX_05695;Name=AC3ASX_05695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05695;pseudo=true JBYLIA010000001.1 Protein Homology CDS 999369 999844 . + 0 ID=cds-AC3ASX_05695;Parent=gene-AC3ASX_05695;Note=frameshifted;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF012745.7;locus_tag=AC3ASX_05695;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 999834 1000094 . + . ID=gene-AC3ASX_05700;Name=AC3ASX_05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05700 JBYLIA010000001.1 GeneMarkS-2+ CDS 999834 1000094 . + 0 ID=cds-MHV1764933.1;Parent=gene-AC3ASX_05700;Dbxref=NCBI_GP:MHV1764933.1;Name=MHV1764933.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05700;product=hypothetical protein;protein_id=MHV1764933.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1000121 1000783 . + . ID=gene-AC3ASX_05705;Name=AC3ASX_05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05705 JBYLIA010000001.1 Protein Homology CDS 1000121 1000783 . + 0 ID=cds-MHV1764934.1;Parent=gene-AC3ASX_05705;Dbxref=NCBI_GP:MHV1764934.1;Name=MHV1764934.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010031955.1;locus_tag=AC3ASX_05705;product=pyrimidine 5'-nucleotidase;protein_id=MHV1764934.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1000770 1001876 . - . ID=gene-AC3ASX_05710;Name=AC3ASX_05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05710 JBYLIA010000001.1 Protein Homology CDS 1000770 1001876 . - 0 ID=cds-MHV1764935.1;Parent=gene-AC3ASX_05710;Dbxref=NCBI_GP:MHV1764935.1;Name=MHV1764935.1;Ontology_term=GO:0005975,GO:0016310,GO:0005524,GO:0016301,GO:0016773,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA,carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036989.1;locus_tag=AC3ASX_05710;product=carbohydrate kinase family protein;protein_id=MHV1764935.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1002113 1002894 . + . ID=gene-AC3ASX_05715;Name=AC3ASX_05715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05715;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1002113 1002894 . + 0 ID=cds-AC3ASX_05715;Parent=gene-AC3ASX_05715;Note=frameshifted%3B internal stop;Ontology_term=GO:0043170,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=macromolecule metabolic process|0043170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287507.1;locus_tag=AC3ASX_05715;product=cyanophycinase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1003248 1003323 . + . ID=gene-AC3ASX_05720;Name=AC3ASX_05720;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_05720 JBYLIA010000001.1 tRNAscan-SE tRNA 1003248 1003323 . + . ID=rna-AC3ASX_05720;Parent=gene-AC3ASX_05720;anticodon=(pos:1003281..1003283);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_05720;product=tRNA-Phe JBYLIA010000001.1 tRNAscan-SE exon 1003248 1003323 . + . ID=exon-AC3ASX_05720-1;Parent=rna-AC3ASX_05720;anticodon=(pos:1003281..1003283);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_05720;product=tRNA-Phe JBYLIA010000001.1 Genbank gene 1003339 1003415 . + . ID=gene-AC3ASX_05725;Name=AC3ASX_05725;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_05725 JBYLIA010000001.1 tRNAscan-SE tRNA 1003339 1003415 . + . ID=rna-AC3ASX_05725;Parent=gene-AC3ASX_05725;anticodon=(pos:1003373..1003375);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_05725;product=tRNA-Pro JBYLIA010000001.1 tRNAscan-SE exon 1003339 1003415 . + . ID=exon-AC3ASX_05725-1;Parent=rna-AC3ASX_05725;anticodon=(pos:1003373..1003375);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_05725;product=tRNA-Pro JBYLIA010000001.1 Genbank gene 1003424 1003500 . + . ID=gene-AC3ASX_05730;Name=AC3ASX_05730;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_05730 JBYLIA010000001.1 tRNAscan-SE tRNA 1003424 1003500 . + . ID=rna-AC3ASX_05730;Parent=gene-AC3ASX_05730;anticodon=(pos:1003458..1003460);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_05730;product=tRNA-Arg JBYLIA010000001.1 tRNAscan-SE exon 1003424 1003500 . + . ID=exon-AC3ASX_05730-1;Parent=rna-AC3ASX_05730;anticodon=(pos:1003458..1003460);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_05730;product=tRNA-Arg JBYLIA010000001.1 Genbank gene 1003527 1003602 . + . ID=gene-AC3ASX_05735;Name=AC3ASX_05735;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_05735 JBYLIA010000001.1 tRNAscan-SE tRNA 1003527 1003602 . + . ID=rna-AC3ASX_05735;Parent=gene-AC3ASX_05735;anticodon=(pos:1003560..1003562);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_05735;product=tRNA-His JBYLIA010000001.1 tRNAscan-SE exon 1003527 1003602 . + . ID=exon-AC3ASX_05735-1;Parent=rna-AC3ASX_05735;anticodon=(pos:1003560..1003562);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_05735;product=tRNA-His JBYLIA010000001.1 Genbank gene 1003609 1003691 . + . ID=gene-AC3ASX_05740;Name=AC3ASX_05740;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_05740 JBYLIA010000001.1 tRNAscan-SE tRNA 1003609 1003691 . + . ID=rna-AC3ASX_05740;Parent=gene-AC3ASX_05740;anticodon=(pos:1003643..1003645);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_05740;product=tRNA-Leu JBYLIA010000001.1 tRNAscan-SE exon 1003609 1003691 . + . ID=exon-AC3ASX_05740-1;Parent=rna-AC3ASX_05740;anticodon=(pos:1003643..1003645);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_05740;product=tRNA-Leu JBYLIA010000001.1 Genbank gene 1003853 1005109 . + . ID=gene-AC3ASX_05745;Name=AC3ASX_05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05745 JBYLIA010000001.1 Protein Homology CDS 1003853 1005109 . + 0 ID=cds-MHV1764936.1;Parent=gene-AC3ASX_05745;Dbxref=NCBI_GP:MHV1764936.1;Name=MHV1764936.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020721.1;locus_tag=AC3ASX_05745;product=MFS transporter;protein_id=MHV1764936.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1005189 1006406 . + . ID=gene-AC3ASX_05750;Name=pgsB;gbkey=Gene;gene=pgsB;gene_biotype=protein_coding;locus_tag=AC3ASX_05750 JBYLIA010000001.1 Protein Homology CDS 1005189 1006406 . + 0 ID=cds-MHV1764937.1;Parent=gene-AC3ASX_05750;Dbxref=NCBI_GP:MHV1764937.1;Name=MHV1764937.1;Ontology_term=GO:0070501,GO:0016020;gbkey=CDS;gene=pgsB;go_component=membrane|0016020||IEA;go_process=poly-gamma-glutamate biosynthetic process|0070501||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034344.1;locus_tag=AC3ASX_05750;product=poly-gamma-glutamate synthase PgsB;protein_id=MHV1764937.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1006431 1006895 . + . ID=gene-AC3ASX_05755;Name=pgsC;gbkey=Gene;gene=pgsC;gene_biotype=protein_coding;locus_tag=AC3ASX_05755 JBYLIA010000001.1 Protein Homology CDS 1006431 1006895 . + 0 ID=cds-MHV1764938.1;Parent=gene-AC3ASX_05755;Dbxref=NCBI_GP:MHV1764938.1;Name=MHV1764938.1;Ontology_term=GO:0070501,GO:0016020;gbkey=CDS;gene=pgsC;go_component=membrane|0016020||IEA;go_process=poly-gamma-glutamate biosynthetic process|0070501||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287512.1;locus_tag=AC3ASX_05755;product=poly-gamma-glutamate biosynthesis protein PgsC;protein_id=MHV1764938.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1006897 1008105 . + . ID=gene-AC3ASX_05760;Name=pgsW;gbkey=Gene;gene=pgsW;gene_biotype=protein_coding;locus_tag=AC3ASX_05760 JBYLIA010000001.1 Protein Homology CDS 1006897 1008105 . + 0 ID=cds-MHV1764939.1;Parent=gene-AC3ASX_05760;Dbxref=NCBI_GP:MHV1764939.1;Name=MHV1764939.1;gbkey=CDS;gene=pgsW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012119017.1;locus_tag=AC3ASX_05760;product=poly-gamma-glutamate system protein;protein_id=MHV1764939.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1008174 1010288 . + . ID=gene-AC3ASX_05765;Name=AC3ASX_05765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05765 JBYLIA010000001.1 Protein Homology CDS 1008174 1010288 . + 0 ID=cds-MHV1764940.1;Parent=gene-AC3ASX_05765;Dbxref=NCBI_GP:MHV1764940.1;Name=MHV1764940.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025524.1;locus_tag=AC3ASX_05765;product=RelA/SpoT family protein;protein_id=MHV1764940.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1010296 1010898 . - . ID=gene-AC3ASX_05770;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=AC3ASX_05770 JBYLIA010000001.1 Protein Homology CDS 1010296 1010898 . - 0 ID=cds-MHV1764941.1;Parent=gene-AC3ASX_05770;Dbxref=NCBI_GP:MHV1764941.1;Name=MHV1764941.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549978.1;locus_tag=AC3ASX_05770;product=recombination mediator RecR;protein_id=MHV1764941.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1010898 1011236 . - . ID=gene-AC3ASX_05775;Name=AC3ASX_05775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05775 JBYLIA010000001.1 Protein Homology CDS 1010898 1011236 . - 0 ID=cds-MHV1764942.1;Parent=gene-AC3ASX_05775;Dbxref=NCBI_GP:MHV1764942.1;Name=MHV1764942.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004288003.1;locus_tag=AC3ASX_05775;product=YbaB/EbfC family nucleoid-associated protein;protein_id=MHV1764942.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1011247 1012362 . - . ID=gene-AC3ASX_05780;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=AC3ASX_05780 JBYLIA010000001.1 Protein Homology CDS 1011247 1012362 . - 0 ID=cds-MHV1764943.1;Parent=gene-AC3ASX_05780;Dbxref=NCBI_GP:MHV1764943.1;Name=MHV1764943.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020739.1;locus_tag=AC3ASX_05780;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=MHV1764943.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1012468 1012848 . + . ID=gene-AC3ASX_05785;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=AC3ASX_05785 JBYLIA010000001.1 Protein Homology CDS 1012468 1012848 . + 0 ID=cds-MHV1764944.1;Parent=gene-AC3ASX_05785;Dbxref=NCBI_GP:MHV1764944.1;Name=MHV1764944.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429552.1;locus_tag=AC3ASX_05785;product=glycine cleavage system protein GcvH;protein_id=MHV1764944.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1012838 1013124 . + . ID=gene-AC3ASX_05790;Name=AC3ASX_05790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05790;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1012838 1013124 . + 0 ID=cds-AC3ASX_05790;Parent=gene-AC3ASX_05790;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429551.1;locus_tag=AC3ASX_05790;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1013210 1014986 . - . ID=gene-AC3ASX_05795;Name=AC3ASX_05795;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05795;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1013210 1014986 . - 0 ID=cds-AC3ASX_05795;Parent=gene-AC3ASX_05795;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549976.1;locus_tag=AC3ASX_05795;product=lytic polysaccharide monooxygenase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1015429 1017333 . + . ID=gene-AC3ASX_05800;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=AC3ASX_05800 JBYLIA010000001.1 Protein Homology CDS 1015429 1017333 . + 0 ID=cds-MHV1764945.1;Parent=gene-AC3ASX_05800;Dbxref=NCBI_GP:MHV1764945.1;Name=MHV1764945.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549975.1;locus_tag=AC3ASX_05800;product=threonine--tRNA ligase;protein_id=MHV1764945.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1017340 1017876 . + . ID=gene-AC3ASX_05805;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=AC3ASX_05805 JBYLIA010000001.1 Protein Homology CDS 1017340 1017876 . + 0 ID=cds-MHV1764946.1;Parent=gene-AC3ASX_05805;Dbxref=NCBI_GP:MHV1764946.1;Name=MHV1764946.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015083947.1;locus_tag=AC3ASX_05805;product=translation initiation factor IF-3;protein_id=MHV1764946.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1017920 1018117 . + . ID=gene-AC3ASX_05810;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=AC3ASX_05810 JBYLIA010000001.1 Protein Homology CDS 1017920 1018117 . + 0 ID=cds-MHV1764947.1;Parent=gene-AC3ASX_05810;Dbxref=NCBI_GP:MHV1764947.1;Name=MHV1764947.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004337196.1;locus_tag=AC3ASX_05810;product=50S ribosomal protein L35;protein_id=MHV1764947.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1018153 1018509 . + . ID=gene-AC3ASX_05815;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=AC3ASX_05815 JBYLIA010000001.1 Protein Homology CDS 1018153 1018509 . + 0 ID=cds-MHV1764948.1;Parent=gene-AC3ASX_05815;Dbxref=NCBI_GP:MHV1764948.1;Name=MHV1764948.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014715541.1;locus_tag=AC3ASX_05815;product=50S ribosomal protein L20;protein_id=MHV1764948.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1018548 1019271 . + . ID=gene-AC3ASX_05820;Name=AC3ASX_05820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05820;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1018548 1019271 . + 0 ID=cds-AC3ASX_05820;Parent=gene-AC3ASX_05820;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034325.1;locus_tag=AC3ASX_05820;product=TVP38/TMEM64 family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1019915 1020589 . - . ID=gene-AC3ASX_05825;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=AC3ASX_05825 JBYLIA010000001.1 Protein Homology CDS 1019915 1020589 . - 0 ID=cds-MHV1764949.1;Parent=gene-AC3ASX_05825;Dbxref=NCBI_GP:MHV1764949.1;Name=MHV1764949.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012279656.1;locus_tag=AC3ASX_05825;product=ribose-5-phosphate isomerase RpiA;protein_id=MHV1764949.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1020591 1021964 . - . ID=gene-AC3ASX_05830;Name=AC3ASX_05830;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05830;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1020591 1021964 . - 0 ID=cds-AC3ASX_05830;Parent=gene-AC3ASX_05830;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021465.1;locus_tag=AC3ASX_05830;product=SLC5/6 family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1021961 1022372 . - . ID=gene-AC3ASX_05835;Name=AC3ASX_05835;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05835;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1021961 1022372 . - 0 ID=cds-AC3ASX_05835;Parent=gene-AC3ASX_05835;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014715547.1;locus_tag=AC3ASX_05835;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1022381 1024263 . - . ID=gene-AC3ASX_05840;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=pseudogene;locus_tag=AC3ASX_05840;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1022381 1024263 . - 0 ID=cds-AC3ASX_05840;Parent=gene-AC3ASX_05840;Note=frameshifted;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015250.1;locus_tag=AC3ASX_05840;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1024407 1025483 . + . ID=gene-AC3ASX_05845;Name=AC3ASX_05845;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05845;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1024407 1025483 . + 0 ID=cds-AC3ASX_05845;Parent=gene-AC3ASX_05845;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011648663.1;locus_tag=AC3ASX_05845;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1025496 1026375 . + . ID=gene-AC3ASX_05850;Name=AC3ASX_05850;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05850;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1025496 1026375 . + 0 ID=cds-AC3ASX_05850;Parent=gene-AC3ASX_05850;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548520.1;locus_tag=AC3ASX_05850;product=FUSC family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1026390 1027305 . - . ID=gene-AC3ASX_05855;Name=AC3ASX_05855;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05855;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1026390 1027305 . - 0 ID=cds-AC3ASX_05855;Parent=gene-AC3ASX_05855;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429427.1;locus_tag=AC3ASX_05855;product=LysR family transcriptional regulator;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1027410 1028122 . + . ID=gene-AC3ASX_05860;Name=AC3ASX_05860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05860;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1027410 1028122 . + 0 ID=cds-AC3ASX_05860;Parent=gene-AC3ASX_05860;Note=frameshifted%3B internal stop;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429428.1;locus_tag=AC3ASX_05860;product=SDR family oxidoreductase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1028408 1029871 . + . ID=gene-AC3ASX_05865;Name=AC3ASX_05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05865 JBYLIA010000001.1 Protein Homology CDS 1028408 1029871 . + 0 ID=cds-MHV1764950.1;Parent=gene-AC3ASX_05865;Dbxref=NCBI_GP:MHV1764950.1;Name=MHV1764950.1;Ontology_term=GO:0004527;gbkey=CDS;go_function=exonuclease activity|0004527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015260.1;locus_tag=AC3ASX_05865;product=exonuclease domain-containing protein;protein_id=MHV1764950.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1029858 1031864 . + . ID=gene-AC3ASX_05870;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=AC3ASX_05870 JBYLIA010000001.1 Protein Homology CDS 1029858 1031864 . + 0 ID=cds-MHV1764951.1;Parent=gene-AC3ASX_05870;Dbxref=NCBI_GP:MHV1764951.1;Name=MHV1764951.1;Ontology_term=GO:0006289,GO:0003677,GO:0005515,GO:0005524,GO:0016787,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,protein binding|0005515||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012279648.1;locus_tag=AC3ASX_05870;product=excinuclease ABC subunit UvrB;protein_id=MHV1764951.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1031904 1032701 . + . ID=gene-AC3ASX_05875;Name=AC3ASX_05875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05875 JBYLIA010000001.1 Protein Homology CDS 1031904 1032701 . + 0 ID=cds-MHV1764952.1;Parent=gene-AC3ASX_05875;Dbxref=NCBI_GP:MHV1764952.1;Name=MHV1764952.1;Ontology_term=GO:0003677,GO:0004519;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429431.1;locus_tag=AC3ASX_05875;product=nuclease-related domain-containing protein;protein_id=MHV1764952.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1032701 1033498 . + . ID=gene-AC3ASX_05880;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=AC3ASX_05880 JBYLIA010000001.1 Protein Homology CDS 1032701 1033498 . + 0 ID=cds-MHV1764953.1;Parent=gene-AC3ASX_05880;Dbxref=NCBI_GP:MHV1764953.1;Name=MHV1764953.1;Ontology_term=GO:0009252,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010030839.1;locus_tag=AC3ASX_05880;product=glutamate racemase;protein_id=MHV1764953.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1033586 1033863 . + . ID=gene-AC3ASX_05885;Name=AC3ASX_05885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05885;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1033586 1033863 . + 0 ID=cds-AC3ASX_05885;Parent=gene-AC3ASX_05885;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010030840.1;locus_tag=AC3ASX_05885;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1034049 1035434 . + . ID=gene-AC3ASX_05890;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=AC3ASX_05890 JBYLIA010000001.1 Protein Homology CDS 1034049 1035434 . + 0 ID=cds-MHV1764954.1;Parent=gene-AC3ASX_05890;Dbxref=NCBI_GP:MHV1764954.1;Name=MHV1764954.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548502.1;locus_tag=AC3ASX_05890;product=exodeoxyribonuclease VII large subunit;protein_id=MHV1764954.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1035418 1035618 . + . ID=gene-AC3ASX_05895;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=AC3ASX_05895 JBYLIA010000001.1 Protein Homology CDS 1035418 1035618 . + 0 ID=cds-MHV1764955.1;Parent=gene-AC3ASX_05895;Dbxref=NCBI_GP:MHV1764955.1;Name=MHV1764955.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseB;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549960.1;locus_tag=AC3ASX_05895;product=exodeoxyribonuclease VII small subunit;protein_id=MHV1764955.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1035720 1036019 . + . ID=gene-AC3ASX_05900;Name=AC3ASX_05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05900 JBYLIA010000001.1 GeneMarkS-2+ CDS 1035720 1036019 . + 0 ID=cds-MHV1764956.1;Parent=gene-AC3ASX_05900;Dbxref=NCBI_GP:MHV1764956.1;Name=MHV1764956.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05900;product=hypothetical protein;protein_id=MHV1764956.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1036048 1036808 . - . ID=gene-AC3ASX_05905;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=pseudogene;locus_tag=AC3ASX_05905;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1036048 1036808 . - 0 ID=cds-AC3ASX_05905;Parent=gene-AC3ASX_05905;Note=frameshifted%3B internal stop;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012279617.1;locus_tag=AC3ASX_05905;product=tRNA 2-thiocytidine(32) synthetase TtcA;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1036809 1037282 . - . ID=gene-AC3ASX_05910;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=AC3ASX_05910 JBYLIA010000001.1 Protein Homology CDS 1036809 1037282 . - 0 ID=cds-MHV1764957.1;Parent=gene-AC3ASX_05910;Dbxref=NCBI_GP:MHV1764957.1;Name=MHV1764957.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015283.1;locus_tag=AC3ASX_05910;product=SsrA-binding protein SmpB;protein_id=MHV1764957.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1037358 1037789 . + . ID=gene-AC3ASX_05915;Name=AC3ASX_05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05915 JBYLIA010000001.1 Protein Homology CDS 1037358 1037789 . + 0 ID=cds-MHV1764958.1;Parent=gene-AC3ASX_05915;Dbxref=NCBI_GP:MHV1764958.1;Name=MHV1764958.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015285.1;locus_tag=AC3ASX_05915;product=type II toxin-antitoxin system RatA family toxin;protein_id=MHV1764958.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1037789 1038094 . + . ID=gene-AC3ASX_05920;Name=AC3ASX_05920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05920 JBYLIA010000001.1 Protein Homology CDS 1037789 1038094 . + 0 ID=cds-MHV1764959.1;Parent=gene-AC3ASX_05920;Dbxref=NCBI_GP:MHV1764959.1;Name=MHV1764959.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429436.1;locus_tag=AC3ASX_05920;product=RnfH family protein;protein_id=MHV1764959.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1038094 1039299 . + . ID=gene-AC3ASX_05925;Name=mnmC1;gbkey=Gene;gene=mnmC1;gene_biotype=protein_coding;locus_tag=AC3ASX_05925 JBYLIA010000001.1 Protein Homology CDS 1038094 1039299 . + 0 ID=cds-MHV1764960.1;Parent=gene-AC3ASX_05925;Dbxref=NCBI_GP:MHV1764960.1;Name=MHV1764960.1;Ontology_term=GO:0006400,GO:0016645;gbkey=CDS;gene=mnmC1;go_function=oxidoreductase activity%2C acting on the CH-NH group of donors|0016645||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021418.1;locus_tag=AC3ASX_05925;product=FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC1;protein_id=MHV1764960.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1039410 1040143 . + . ID=gene-AC3ASX_05930;Name=AC3ASX_05930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05930;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1039410 1040143 . + 0 ID=cds-AC3ASX_05930;Parent=gene-AC3ASX_05930;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548494.1;locus_tag=AC3ASX_05930;product=MlaA family lipoprotein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1040200 1041191 . + . ID=gene-AC3ASX_05935;Name=AC3ASX_05935;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05935;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1040200 1041191 . + 0 ID=cds-AC3ASX_05935;Parent=gene-AC3ASX_05935;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014551206.1;locus_tag=AC3ASX_05935;product=gamma-glutamyltransferase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1041194 1041628 . - . ID=gene-AC3ASX_05940;Name=AC3ASX_05940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05940 JBYLIA010000001.1 GeneMarkS-2+ CDS 1041194 1041628 . - 0 ID=cds-MHV1764961.1;Parent=gene-AC3ASX_05940;Dbxref=NCBI_GP:MHV1764961.1;Name=MHV1764961.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05940;product=hypothetical protein;protein_id=MHV1764961.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1041630 1041839 . - . ID=gene-AC3ASX_05945;Name=AC3ASX_05945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05945 JBYLIA010000001.1 Protein Homology CDS 1041630 1041839 . - 0 ID=cds-MHV1764962.1;Parent=gene-AC3ASX_05945;Dbxref=NCBI_GP:MHV1764962.1;Name=MHV1764962.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: protein motif:HMM:NF019846.7;locus_tag=AC3ASX_05945;product=methyltransferase domain-containing protein;protein_id=MHV1764962.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1042241 1042720 . - . ID=gene-AC3ASX_05950;Name=AC3ASX_05950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05950;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1042241 1042720 . - 0 ID=cds-AC3ASX_05950;Parent=gene-AC3ASX_05950;Note=internal stop;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012334.7;locus_tag=AC3ASX_05950;product=SDR family NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1042705 1042833 . - . ID=gene-AC3ASX_05955;Name=AC3ASX_05955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05955 JBYLIA010000001.1 Protein Homology CDS 1042705 1042833 . - 0 ID=cds-MHV1764963.1;Parent=gene-AC3ASX_05955;Dbxref=NCBI_GP:MHV1764963.1;Name=MHV1764963.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012334.7;locus_tag=AC3ASX_05955;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=MHV1764963.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1042909 1044724 . - . ID=gene-AC3ASX_05960;Name=typA;gbkey=Gene;gene=typA;gene_biotype=pseudogene;locus_tag=AC3ASX_05960;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1042909 1044724 . - 0 ID=cds-AC3ASX_05960;Parent=gene-AC3ASX_05960;Note=frameshifted%3B internal stop;Ontology_term=GO:0006412,GO:0006950,GO:0003924,GO:0005525;gbkey=CDS;gene=typA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translation|0006412||IEA,response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034277.1;locus_tag=AC3ASX_05960;product=translational GTPase TypA;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1045603 1046163 . + . ID=gene-AC3ASX_05965;Name=AC3ASX_05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05965 JBYLIA010000001.1 GeneMarkS-2+ CDS 1045603 1046163 . + 0 ID=cds-MHV1764964.1;Parent=gene-AC3ASX_05965;Dbxref=NCBI_GP:MHV1764964.1;Name=MHV1764964.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05965;product=GNAT family N-acetyltransferase;protein_id=MHV1764964.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1046198 1046356 . + . ID=gene-AC3ASX_05970;Name=AC3ASX_05970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05970 JBYLIA010000001.1 GeneMarkS-2+ CDS 1046198 1046356 . + 0 ID=cds-MHV1764965.1;Parent=gene-AC3ASX_05970;Dbxref=NCBI_GP:MHV1764965.1;Name=MHV1764965.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_05970;product=hypothetical protein;protein_id=MHV1764965.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1046728 1047996 . + . ID=gene-AC3ASX_05975;Name=AC3ASX_05975;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05975;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1046728 1047996 . + 0 ID=cds-AC3ASX_05975;Parent=gene-AC3ASX_05975;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010030844.1;locus_tag=AC3ASX_05975;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1047993 1048865 . - . ID=gene-AC3ASX_05980;Name=AC3ASX_05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05980 JBYLIA010000001.1 Protein Homology CDS 1047993 1048865 . - 0 ID=cds-MHV1764966.1;Parent=gene-AC3ASX_05980;Dbxref=NCBI_GP:MHV1764966.1;Name=MHV1764966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034178.1;locus_tag=AC3ASX_05980;product=1-aminocyclopropane-1-carboxylate deaminase;protein_id=MHV1764966.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1048874 1049044 . - . ID=gene-AC3ASX_05985;Name=AC3ASX_05985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_05985 JBYLIA010000001.1 Protein Homology CDS 1048874 1049044 . - 0 ID=cds-MHV1764967.1;Parent=gene-AC3ASX_05985;Dbxref=NCBI_GP:MHV1764967.1;Name=MHV1764967.1;Ontology_term=GO:0043448,GO:0005506,GO:0009055;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA;go_process=alkane catabolic process|0043448||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018715.1;locus_tag=AC3ASX_05985;product=rubredoxin;protein_id=MHV1764967.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1049305 1050456 . + . ID=gene-AC3ASX_05990;Name=AC3ASX_05990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05990;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1049305 1050456 . + 0 ID=cds-AC3ASX_05990;Parent=gene-AC3ASX_05990;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003039681.1;locus_tag=AC3ASX_05990;product=protein adenylyltransferase SelO family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1050448 1051558 . - . ID=gene-AC3ASX_05995;Name=AC3ASX_05995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_05995;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1050448 1051558 . - 0 ID=cds-AC3ASX_05995;Parent=gene-AC3ASX_05995;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034173.1;locus_tag=AC3ASX_05995;product=cation:dicarboxylate symporter family transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1051732 1052207 . + . ID=gene-AC3ASX_06000;Name=AC3ASX_06000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06000;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1051732 1052207 . + 0 ID=cds-AC3ASX_06000;Parent=gene-AC3ASX_06000;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0005975,GO:0016787,GO:0097367;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026324.1;locus_tag=AC3ASX_06000;product=SIS domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1052246 1052605 . + . ID=gene-AC3ASX_06005;Name=AC3ASX_06005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06005;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1052246 1052605 . + 0 ID=cds-AC3ASX_06005;Parent=gene-AC3ASX_06005;Note=internal stop;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012312.7;locus_tag=AC3ASX_06005;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1053066 1053287 . + . ID=gene-AC3ASX_06010;Name=AC3ASX_06010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06010 JBYLIA010000001.1 Protein Homology CDS 1053066 1053287 . + 0 ID=cds-MHV1764968.1;Parent=gene-AC3ASX_06010;Dbxref=NCBI_GP:MHV1764968.1;Name=MHV1764968.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF012312.7;locus_tag=AC3ASX_06010;product=MFS transporter;protein_id=MHV1764968.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1053610 1053783 . + . ID=gene-AC3ASX_06015;Name=AC3ASX_06015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06015 JBYLIA010000001.1 GeneMarkS-2+ CDS 1053610 1053783 . + 0 ID=cds-MHV1764969.1;Parent=gene-AC3ASX_06015;Dbxref=NCBI_GP:MHV1764969.1;Name=MHV1764969.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_06015;product=hypothetical protein;protein_id=MHV1764969.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1053789 1054172 . + . ID=gene-AC3ASX_06020;Name=AC3ASX_06020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06020 JBYLIA010000001.1 Protein Homology CDS 1053789 1054172 . + 0 ID=cds-MHV1764970.1;Parent=gene-AC3ASX_06020;Dbxref=NCBI_GP:MHV1764970.1;Name=MHV1764970.1;Ontology_term=GO:0016311,GO:0003993;gbkey=CDS;go_function=acid phosphatase activity|0003993||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: protein motif:HMM:NF013718.7;locus_tag=AC3ASX_06020;product=acid phosphatase;protein_id=MHV1764970.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1054169 1054914 . - . ID=gene-AC3ASX_06025;Name=AC3ASX_06025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06025;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1054169 1054914 . - 0 ID=cds-AC3ASX_06025;Parent=gene-AC3ASX_06025;Note=frameshifted;Ontology_term=GO:0051540,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=metal cluster binding|0051540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003039668.1;locus_tag=AC3ASX_06025;product=Nif3-like dinuclear metal center hexameric protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1055007 1056212 . + . ID=gene-AC3ASX_06030;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=AC3ASX_06030 JBYLIA010000001.1 Protein Homology CDS 1055007 1056212 . + 0 ID=cds-MHV1764971.1;Parent=gene-AC3ASX_06030;Dbxref=NCBI_GP:MHV1764971.1;Name=MHV1764971.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026311.1;locus_tag=AC3ASX_06030;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=MHV1764971.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1056227 1056933 . + . ID=gene-AC3ASX_06035;Name=pgeF;gbkey=Gene;gene=pgeF;gene_biotype=pseudogene;locus_tag=AC3ASX_06035;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1056227 1056933 . + 0 ID=cds-AC3ASX_06035;Parent=gene-AC3ASX_06035;Note=frameshifted%3B internal stop;gbkey=CDS;gene=pgeF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014715584.1;locus_tag=AC3ASX_06035;product=peptidoglycan editing factor PgeF;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1056952 1058745 . + . ID=gene-AC3ASX_06040;Name=AC3ASX_06040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06040 JBYLIA010000001.1 Protein Homology CDS 1056952 1058745 . + 0 ID=cds-MHV1764972.1;Parent=gene-AC3ASX_06040;Dbxref=NCBI_GP:MHV1764972.1;Name=MHV1764972.1;Ontology_term=GO:0006508,GO:0004177,GO:0046872,GO:0070006,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aminopeptidase activity|0004177||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549894.1;locus_tag=AC3ASX_06040;product=aminopeptidase P family protein;protein_id=MHV1764972.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1058850 1059902 . + . ID=gene-AC3ASX_06045;Name=AC3ASX_06045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06045 JBYLIA010000001.1 Protein Homology CDS 1058850 1059902 . + 0 ID=cds-MHV1764973.1;Parent=gene-AC3ASX_06045;Dbxref=NCBI_GP:MHV1764973.1;Name=MHV1764973.1;Ontology_term=GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034158.1;locus_tag=AC3ASX_06045;product=DNA/RNA non-specific endonuclease;protein_id=MHV1764973.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1059941 1060599 . - . ID=gene-AC3ASX_06050;Name=AC3ASX_06050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06050;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1059941 1060599 . - 0 ID=cds-AC3ASX_06050;Parent=gene-AC3ASX_06050;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003023375.1;locus_tag=AC3ASX_06050;product=serine hydrolase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1061037 1061168 . + . ID=gene-AC3ASX_06055;Name=AC3ASX_06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06055 JBYLIA010000001.1 Protein Homology CDS 1061037 1061168 . + 0 ID=cds-MHV1764974.1;Parent=gene-AC3ASX_06055;Dbxref=NCBI_GP:MHV1764974.1;Name=MHV1764974.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF024698.7;locus_tag=AC3ASX_06055;product=GNAT family N-acetyltransferase;protein_id=MHV1764974.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1061265 1062755 . - . ID=gene-AC3ASX_06060;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=AC3ASX_06060 JBYLIA010000001.1 Protein Homology CDS 1061265 1062755 . - 0 ID=cds-MHV1764975.1;Parent=gene-AC3ASX_06060;Dbxref=NCBI_GP:MHV1764975.1;Name=MHV1764975.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548118.1;locus_tag=AC3ASX_06060;product=apolipoprotein N-acyltransferase;protein_id=MHV1764975.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1062755 1063597 . - . ID=gene-AC3ASX_06065;Name=AC3ASX_06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06065 JBYLIA010000001.1 Protein Homology CDS 1062755 1063597 . - 0 ID=cds-MHV1764976.1;Parent=gene-AC3ASX_06065;Dbxref=NCBI_GP:MHV1764976.1;Name=MHV1764976.1;Ontology_term=GO:0015693,GO:0005215,GO:0050660;gbkey=CDS;go_function=transporter activity|0005215||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026299.1;locus_tag=AC3ASX_06065;product=CorC family transporter;protein_id=MHV1764976.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1063584 1064075 . - . ID=gene-AC3ASX_06070;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=AC3ASX_06070 JBYLIA010000001.1 Protein Homology CDS 1063584 1064075 . - 0 ID=cds-MHV1764977.1;Parent=gene-AC3ASX_06070;Dbxref=NCBI_GP:MHV1764977.1;Name=MHV1764977.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922976.1;locus_tag=AC3ASX_06070;product=rRNA maturation RNase YbeY;protein_id=MHV1764977.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1064068 1065051 . - . ID=gene-AC3ASX_06075;Name=AC3ASX_06075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06075 JBYLIA010000001.1 Protein Homology CDS 1064068 1065051 . - 0 ID=cds-MHV1764978.1;Parent=gene-AC3ASX_06075;Dbxref=NCBI_GP:MHV1764978.1;Name=MHV1764978.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922977.1;locus_tag=AC3ASX_06075;product=PhoH family protein;protein_id=MHV1764978.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1065055 1066422 . - . ID=gene-AC3ASX_06080;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=AC3ASX_06080 JBYLIA010000001.1 Protein Homology CDS 1065055 1066422 . - 0 ID=cds-MHV1764979.1;Parent=gene-AC3ASX_06080;Dbxref=NCBI_GP:MHV1764979.1;Name=MHV1764979.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009725494.1;locus_tag=AC3ASX_06080;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=MHV1764979.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1066608 1067294 . + . ID=gene-AC3ASX_06085;Name=AC3ASX_06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06085 JBYLIA010000001.1 Protein Homology CDS 1066608 1067294 . + 0 ID=cds-MHV1764980.1;Parent=gene-AC3ASX_06085;Dbxref=NCBI_GP:MHV1764980.1;Name=MHV1764980.1;Ontology_term=GO:0032259,GO:0008168,GO:0008171,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,O-methyltransferase activity|0008171||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015529.1;locus_tag=AC3ASX_06085;product=O-methyltransferase;protein_id=MHV1764980.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1067320 1068060 . + . ID=gene-AC3ASX_06090;Name=AC3ASX_06090;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06090;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1067320 1068060 . + 0 ID=cds-AC3ASX_06090;Parent=gene-AC3ASX_06090;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886531.1;locus_tag=AC3ASX_06090;product=HAD family acid phosphatase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1068041 1068621 . + . ID=gene-AC3ASX_06095;Name=AC3ASX_06095;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06095;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1068041 1068621 . + 0 ID=cds-AC3ASX_06095;Parent=gene-AC3ASX_06095;Note=frameshifted%3B internal stop;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003023402.1;locus_tag=AC3ASX_06095;product=thymidine kinase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1068718 1069092 . + . ID=gene-AC3ASX_06100;Name=AC3ASX_06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06100 JBYLIA010000001.1 Protein Homology CDS 1068718 1069092 . + 0 ID=cds-MHV1764981.1;Parent=gene-AC3ASX_06100;Dbxref=NCBI_GP:MHV1764981.1;Name=MHV1764981.1;Ontology_term=GO:0003677,GO:0008170;gbkey=CDS;go_function=DNA binding|0003677||IEA,N-methyltransferase activity|0008170||IEA;inference=COORDINATES: protein motif:HMM:NF014442.7;locus_tag=AC3ASX_06100;product=N-6 DNA methylase;protein_id=MHV1764981.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1069405 1069575 . + . ID=gene-AC3ASX_06105;Name=AC3ASX_06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06105 JBYLIA010000001.1 GeneMarkS-2+ CDS 1069405 1069575 . + 0 ID=cds-MHV1764982.1;Parent=gene-AC3ASX_06105;Dbxref=NCBI_GP:MHV1764982.1;Name=MHV1764982.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_06105;product=hypothetical protein;protein_id=MHV1764982.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1069634 1069906 . + . ID=gene-AC3ASX_06110;Name=AC3ASX_06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06110 JBYLIA010000001.1 Protein Homology CDS 1069634 1069906 . + 0 ID=cds-MHV1764983.1;Parent=gene-AC3ASX_06110;Dbxref=NCBI_GP:MHV1764983.1;Name=MHV1764983.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037202.7;locus_tag=AC3ASX_06110;product=type ISP restriction/modification enzyme;protein_id=MHV1764983.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1069903 1070139 . + . ID=gene-AC3ASX_06115;Name=AC3ASX_06115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06115;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1069903 1070139 . + 0 ID=cds-AC3ASX_06115;Parent=gene-AC3ASX_06115;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037202.7;locus_tag=AC3ASX_06115;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1070158 1070310 . + . ID=gene-AC3ASX_06120;Name=AC3ASX_06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06120 JBYLIA010000001.1 GeneMarkS-2+ CDS 1070158 1070310 . + 0 ID=cds-MHV1764984.1;Parent=gene-AC3ASX_06120;Dbxref=NCBI_GP:MHV1764984.1;Name=MHV1764984.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_06120;product=hypothetical protein;protein_id=MHV1764984.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1070316 1070771 . - . ID=gene-AC3ASX_06125;Name=AC3ASX_06125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06125;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1070316 1070771 . - 0 ID=cds-AC3ASX_06125;Parent=gene-AC3ASX_06125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011733674.1;locus_tag=AC3ASX_06125;product=DUF6790 family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1070922 1072238 . + . ID=gene-AC3ASX_06130;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=AC3ASX_06130 JBYLIA010000001.1 Protein Homology CDS 1070922 1072238 . + 0 ID=cds-MHV1764985.1;Parent=gene-AC3ASX_06130;Dbxref=NCBI_GP:MHV1764985.1;Name=MHV1764985.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018778.1;locus_tag=AC3ASX_06130;product=trigger factor;protein_id=MHV1764985.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1072263 1072868 . + . ID=gene-AC3ASX_06135;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=AC3ASX_06135 JBYLIA010000001.1 Protein Homology CDS 1072263 1072868 . + 0 ID=cds-MHV1764986.1;Parent=gene-AC3ASX_06135;Dbxref=NCBI_GP:MHV1764986.1;Name=MHV1764986.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013923343.1;locus_tag=AC3ASX_06135;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=MHV1764986.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1072892 1074145 . + . ID=gene-AC3ASX_06140;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=AC3ASX_06140 JBYLIA010000001.1 Protein Homology CDS 1072892 1074145 . + 0 ID=cds-MHV1764987.1;Parent=gene-AC3ASX_06140;Dbxref=NCBI_GP:MHV1764987.1;Name=MHV1764987.1;Ontology_term=GO:0005524,GO:0008270,GO:0016887,GO:0046983;gbkey=CDS;gene=clpX;go_function=ATP binding|0005524||IEA,zinc ion binding|0008270||IEA,ATP hydrolysis activity|0016887||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003023409.1;locus_tag=AC3ASX_06140;product=ATP-dependent Clp protease ATP-binding subunit ClpX;protein_id=MHV1764987.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1074171 1076495 . + . ID=gene-AC3ASX_06145;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=AC3ASX_06145 JBYLIA010000001.1 Protein Homology CDS 1074171 1076495 . + 0 ID=cds-MHV1764988.1;Parent=gene-AC3ASX_06145;Dbxref=NCBI_GP:MHV1764988.1;Name=MHV1764988.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280861.1;locus_tag=AC3ASX_06145;product=endopeptidase La;protein_id=MHV1764988.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1076581 1076853 . + . ID=gene-AC3ASX_06150;Name=AC3ASX_06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06150 JBYLIA010000001.1 Protein Homology CDS 1076581 1076853 . + 0 ID=cds-MHV1764989.1;Parent=gene-AC3ASX_06150;Dbxref=NCBI_GP:MHV1764989.1;Name=MHV1764989.1;Ontology_term=GO:0030261,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014715264.1;locus_tag=AC3ASX_06150;product=HU family DNA-binding protein;protein_id=MHV1764989.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1076967 1078400 . + . ID=gene-AC3ASX_06155;Name=AC3ASX_06155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06155 JBYLIA010000001.1 Protein Homology CDS 1076967 1078400 . + 0 ID=cds-MHV1764990.1;Parent=gene-AC3ASX_06155;Dbxref=NCBI_GP:MHV1764990.1;Name=MHV1764990.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018782.1;locus_tag=AC3ASX_06155;product=peptidylprolyl isomerase;protein_id=MHV1764990.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1078403 1079329 . + . ID=gene-AC3ASX_06160;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=AC3ASX_06160 JBYLIA010000001.1 Protein Homology CDS 1078403 1079329 . + 0 ID=cds-MHV1764991.1;Parent=gene-AC3ASX_06160;Dbxref=NCBI_GP:MHV1764991.1;Name=MHV1764991.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036727.1;locus_tag=AC3ASX_06160;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=MHV1764991.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1079433 1079762 . + . ID=gene-AC3ASX_06165;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=AC3ASX_06165 JBYLIA010000001.1 Protein Homology CDS 1079433 1079762 . + 0 ID=cds-MHV1764992.1;Parent=gene-AC3ASX_06165;Dbxref=NCBI_GP:MHV1764992.1;Name=MHV1764992.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429386.1;locus_tag=AC3ASX_06165;product=RNA chaperone Hfq;protein_id=MHV1764992.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1079815 1081096 . + . ID=gene-AC3ASX_06170;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=pseudogene;locus_tag=AC3ASX_06170;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1079815 1081096 . + 0 ID=cds-AC3ASX_06170;Parent=gene-AC3ASX_06170;Note=frameshifted;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010031291.1;locus_tag=AC3ASX_06170;product=ribosome rescue GTPase HflX;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1081384 1082451 . + . ID=gene-AC3ASX_06175;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=AC3ASX_06175 JBYLIA010000001.1 Protein Homology CDS 1081384 1082451 . + 0 ID=cds-MHV1764993.1;Parent=gene-AC3ASX_06175;Dbxref=NCBI_GP:MHV1764993.1;Name=MHV1764993.1;Ontology_term=GO:0045861,GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;go_process=negative regulation of proteolysis|0045861||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013923335.1;locus_tag=AC3ASX_06175;product=FtsH protease activity modulator HflK;protein_id=MHV1764993.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1082453 1083379 . + . ID=gene-AC3ASX_06180;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=AC3ASX_06180 JBYLIA010000001.1 Protein Homology CDS 1082453 1083379 . + 0 ID=cds-MHV1764994.1;Parent=gene-AC3ASX_06180;Dbxref=NCBI_GP:MHV1764994.1;Name=MHV1764994.1;Ontology_term=GO:0052547,GO:0016020,GO:0098797;gbkey=CDS;gene=hflC;go_component=membrane|0016020||IEA,plasma membrane protein complex|0098797||IEA;go_process=regulation of peptidase activity|0052547||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015667.1;locus_tag=AC3ASX_06180;product=protease modulator HflC;protein_id=MHV1764994.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1083380 1083865 . + . ID=gene-AC3ASX_06185;Name=AC3ASX_06185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06185 JBYLIA010000001.1 Protein Homology CDS 1083380 1083865 . + 0 ID=cds-MHV1764995.1;Parent=gene-AC3ASX_06185;Dbxref=NCBI_GP:MHV1764995.1;Name=MHV1764995.1;Ontology_term=GO:0006470,GO:0004725;gbkey=CDS;go_function=protein tyrosine phosphatase activity|0004725||IEA;go_process=protein dephosphorylation|0006470||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549880.1;locus_tag=AC3ASX_06185;product=low molecular weight protein-tyrosine-phosphatase;protein_id=MHV1764995.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1083862 1084464 . + . ID=gene-AC3ASX_06190;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=AC3ASX_06190 JBYLIA010000001.1 Protein Homology CDS 1083862 1084464 . + 0 ID=cds-MHV1764996.1;Parent=gene-AC3ASX_06190;Dbxref=NCBI_GP:MHV1764996.1;Name=MHV1764996.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008290509.1;locus_tag=AC3ASX_06190;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=MHV1764996.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1084496 1087917 . - . ID=gene-AC3ASX_06195;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=pseudogene;locus_tag=AC3ASX_06195;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1084496 1087917 . - 0 ID=cds-AC3ASX_06195;Parent=gene-AC3ASX_06195;Note=frameshifted%3B internal stop;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287568.1;locus_tag=AC3ASX_06195;product=transcription-repair coupling factor;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1087968 1088651 . - . ID=gene-AC3ASX_06200;Name=AC3ASX_06200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06200 JBYLIA010000001.1 Protein Homology CDS 1087968 1088651 . - 0 ID=cds-MHV1764997.1;Parent=gene-AC3ASX_06200;Dbxref=NCBI_GP:MHV1764997.1;Name=MHV1764997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548457.1;locus_tag=AC3ASX_06200;product=Bax inhibitor-1/YccA family protein;protein_id=MHV1764997.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1088776 1090035 . - . ID=gene-AC3ASX_06205;Name=AC3ASX_06205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06205 JBYLIA010000001.1 Protein Homology CDS 1088776 1090035 . - 0 ID=cds-MHV1764998.1;Parent=gene-AC3ASX_06205;Dbxref=NCBI_GP:MHV1764998.1;Name=MHV1764998.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020391.1;locus_tag=AC3ASX_06205;product=hypothetical protein;protein_id=MHV1764998.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1090035 1090466 . - . ID=gene-AC3ASX_06210;Name=AC3ASX_06210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06210 JBYLIA010000001.1 Protein Homology CDS 1090035 1090466 . - 0 ID=cds-MHV1764999.1;Parent=gene-AC3ASX_06210;Dbxref=NCBI_GP:MHV1764999.1;Name=MHV1764999.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018807.1;locus_tag=AC3ASX_06210;product=DUF1841 family protein;protein_id=MHV1764999.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1090463 1091101 . - . ID=gene-AC3ASX_06215;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=AC3ASX_06215 JBYLIA010000001.1 Protein Homology CDS 1090463 1091101 . - 0 ID=cds-MHV1765000.1;Parent=gene-AC3ASX_06215;Dbxref=NCBI_GP:MHV1765000.1;Name=MHV1765000.1;Ontology_term=GO:0006281,GO:0140078;gbkey=CDS;gene=nth;go_function=class I DNA-(apurinic or apyrimidinic site) endonuclease activity|0140078||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549873.1;locus_tag=AC3ASX_06215;product=endonuclease III;protein_id=MHV1765000.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1091109 1091723 . - . ID=gene-AC3ASX_06220;Name=AC3ASX_06220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06220 JBYLIA010000001.1 Protein Homology CDS 1091109 1091723 . - 0 ID=cds-MHV1765001.1;Parent=gene-AC3ASX_06220;Dbxref=NCBI_GP:MHV1765001.1;Name=MHV1765001.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036701.1;locus_tag=AC3ASX_06220;product=RnfABCDGE type electron transport complex subunit B;protein_id=MHV1765001.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1091725 1092369 . - . ID=gene-AC3ASX_06225;Name=grxB;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=AC3ASX_06225 JBYLIA010000001.1 Protein Homology CDS 1091725 1092369 . - 0 ID=cds-MHV1765002.1;Parent=gene-AC3ASX_06225;Dbxref=NCBI_GP:MHV1765002.1;Name=MHV1765002.1;Ontology_term=GO:0006749,GO:0004362,GO:0005515;gbkey=CDS;gene=grxB;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015691.1;locus_tag=AC3ASX_06225;product=glutaredoxin 2;protein_id=MHV1765002.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1092981 1093271 . + . ID=gene-AC3ASX_06230;Name=AC3ASX_06230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06230 JBYLIA010000001.1 GeneMarkS-2+ CDS 1092981 1093271 . + 0 ID=cds-MHV1765003.1;Parent=gene-AC3ASX_06230;Dbxref=NCBI_GP:MHV1765003.1;Name=MHV1765003.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_06230;product=hypothetical protein;protein_id=MHV1765003.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1093743 1094245 . - . ID=gene-AC3ASX_06235;Name=AC3ASX_06235;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06235;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1093743 1094245 . - 0 ID=cds-AC3ASX_06235;Parent=gene-AC3ASX_06235;Note=frameshifted;Ontology_term=GO:0006826,GO:0006879,GO:0008199;gbkey=CDS;go_function=ferric iron binding|0008199||IEA;go_process=iron ion transport|0006826||IEA,intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015695.1;locus_tag=AC3ASX_06235;product=ferritin;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1094458 1095441 . + . ID=gene-AC3ASX_06240;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=AC3ASX_06240 JBYLIA010000001.1 Protein Homology CDS 1094458 1095441 . + 0 ID=cds-MHV1765004.1;Parent=gene-AC3ASX_06240;Dbxref=NCBI_GP:MHV1765004.1;Name=MHV1765004.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034077.1;locus_tag=AC3ASX_06240;product=lipoyl synthase;protein_id=MHV1765004.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1095471 1096130 . + . ID=gene-AC3ASX_06245;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=AC3ASX_06245 JBYLIA010000001.1 Protein Homology CDS 1095471 1096130 . + 0 ID=cds-MHV1765005.1;Parent=gene-AC3ASX_06245;Dbxref=NCBI_GP:MHV1765005.1;Name=MHV1765005.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287578.1;locus_tag=AC3ASX_06245;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=MHV1765005.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1096146 1096892 . + . ID=gene-AC3ASX_06250;Name=AC3ASX_06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06250 JBYLIA010000001.1 Protein Homology CDS 1096146 1096892 . + 0 ID=cds-MHV1765006.1;Parent=gene-AC3ASX_06250;Dbxref=NCBI_GP:MHV1765006.1;Name=MHV1765006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020411.1;locus_tag=AC3ASX_06250;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=MHV1765006.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1096988 1097503 . + . ID=gene-AC3ASX_06255;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=AC3ASX_06255 JBYLIA010000001.1 Protein Homology CDS 1096988 1097503 . + 0 ID=cds-MHV1765007.1;Parent=gene-AC3ASX_06255;Dbxref=NCBI_GP:MHV1765007.1;Name=MHV1765007.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003042593.1;locus_tag=AC3ASX_06255;product=crossover junction endodeoxyribonuclease RuvC;protein_id=MHV1765007.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1097587 1098780 . + . ID=gene-AC3ASX_06260;Name=AC3ASX_06260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06260 JBYLIA010000001.1 Protein Homology CDS 1097587 1098780 . + 0 ID=cds-MHV1765008.1;Parent=gene-AC3ASX_06260;Dbxref=NCBI_GP:MHV1765008.1;Name=MHV1765008.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015577.1;locus_tag=AC3ASX_06260;product=MFS transporter;protein_id=MHV1765008.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1098793 1099443 . + . ID=gene-AC3ASX_06265;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=AC3ASX_06265 JBYLIA010000001.1 Protein Homology CDS 1098793 1099443 . + 0 ID=cds-MHV1765009.1;Parent=gene-AC3ASX_06265;Dbxref=NCBI_GP:MHV1765009.1;Name=MHV1765009.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020417.1;locus_tag=AC3ASX_06265;product=Holliday junction branch migration protein RuvA;protein_id=MHV1765009.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1100376 1101794 . + . ID=gene-AC3ASX_06270;Name=AC3ASX_06270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06270 JBYLIA010000001.1 Protein Homology CDS 1100376 1101794 . + 0 ID=cds-MHV1765010.1;Parent=gene-AC3ASX_06270;Dbxref=NCBI_GP:MHV1765010.1;Name=MHV1765010.1;Ontology_term=GO:0006310;gbkey=CDS;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015710.1;locus_tag=AC3ASX_06270;product=DNA recombination protein RmuC;protein_id=MHV1765010.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1102439 1103261 . + . ID=gene-AC3ASX_06275;Name=AC3ASX_06275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06275;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1102439 1103261 . + 0 ID=cds-AC3ASX_06275;Parent=gene-AC3ASX_06275;Note=frameshifted;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429637.1;locus_tag=AC3ASX_06275;product=amidohydrolase family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1103271 1104170 . + . ID=gene-AC3ASX_06280;Name=AC3ASX_06280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06280 JBYLIA010000001.1 Protein Homology CDS 1103271 1104170 . + 0 ID=cds-MHV1765011.1;Parent=gene-AC3ASX_06280;Dbxref=NCBI_GP:MHV1765011.1;Name=MHV1765011.1;Ontology_term=GO:0000287,GO:0003824;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,catalytic activity|0003824||IEA;inference=COORDINATES: protein motif:HMM:NF024771.7;locus_tag=AC3ASX_06280;product=mandelate racemase/muconate lactonizing enzyme family protein;protein_id=MHV1765011.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1104218 1104451 . + . ID=gene-AC3ASX_06285;Name=AC3ASX_06285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06285 JBYLIA010000001.1 Protein Homology CDS 1104218 1104451 . + 0 ID=cds-MHV1765012.1;Parent=gene-AC3ASX_06285;Dbxref=NCBI_GP:MHV1765012.1;Name=MHV1765012.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024771.7;locus_tag=AC3ASX_06285;product=enolase C-terminal domain-like protein;protein_id=MHV1765012.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1104455 1105152 . - . ID=gene-AC3ASX_06290;Name=AC3ASX_06290;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06290;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1104455 1105152 . - 0 ID=cds-AC3ASX_06290;Parent=gene-AC3ASX_06290;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015584.1;locus_tag=AC3ASX_06290;product=class II aldolase/adducin family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1105245 1105826 . - . ID=gene-AC3ASX_06295;Name=AC3ASX_06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06295 JBYLIA010000001.1 Protein Homology CDS 1105245 1105826 . - 0 ID=cds-MHV1765013.1;Parent=gene-AC3ASX_06295;Dbxref=NCBI_GP:MHV1765013.1;Name=MHV1765013.1;Ontology_term=GO:0006284,GO:0003905;gbkey=CDS;go_function=alkylbase DNA N-glycosylase activity|0003905||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018833.1;locus_tag=AC3ASX_06295;product=DNA-3-methyladenine glycosylase;protein_id=MHV1765013.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1105950 1106458 . + . ID=gene-AC3ASX_06300;Name=AC3ASX_06300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06300;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1105950 1106458 . + 0 ID=cds-AC3ASX_06300;Parent=gene-AC3ASX_06300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429634.1;locus_tag=AC3ASX_06300;product=isochorismatase family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1106451 1107095 . + . ID=gene-AC3ASX_06305;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=AC3ASX_06305 JBYLIA010000001.1 Protein Homology CDS 1106451 1107095 . + 0 ID=cds-MHV1765014.1;Parent=gene-AC3ASX_06305;Dbxref=NCBI_GP:MHV1765014.1;Name=MHV1765014.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547966.1;locus_tag=AC3ASX_06305;product=nicotinamide riboside transporter PnuC;protein_id=MHV1765014.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1107729 1108907 . + . ID=gene-AC3ASX_06310;Name=AC3ASX_06310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06310 JBYLIA010000001.1 Protein Homology CDS 1107729 1108907 . + 0 ID=cds-MHV1765015.1;Parent=gene-AC3ASX_06310;Dbxref=NCBI_GP:MHV1765015.1;Name=MHV1765015.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015727.1;locus_tag=AC3ASX_06310;product=cation:proton antiporter;protein_id=MHV1765015.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1109204 1109416 . - . ID=gene-AC3ASX_06315;Name=AC3ASX_06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06315 JBYLIA010000001.1 GeneMarkS-2+ CDS 1109204 1109416 . - 0 ID=cds-MHV1765016.1;Parent=gene-AC3ASX_06315;Dbxref=NCBI_GP:MHV1765016.1;Name=MHV1765016.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_06315;product=hypothetical protein;protein_id=MHV1765016.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1109645 1110687 . + . ID=gene-AC3ASX_06320;Name=AC3ASX_06320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06320;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1109645 1110687 . + 0 ID=cds-AC3ASX_06320;Parent=gene-AC3ASX_06320;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003030568.1;locus_tag=AC3ASX_06320;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1110807 1111518 . - . ID=gene-AC3ASX_06325;Name=AC3ASX_06325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06325;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1110807 1111518 . - 0 ID=cds-AC3ASX_06325;Parent=gene-AC3ASX_06325;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013923302.1;locus_tag=AC3ASX_06325;product=M14 family metallopeptidase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1111729 1112697 . + . ID=gene-AC3ASX_06330;Name=AC3ASX_06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06330 JBYLIA010000001.1 Protein Homology CDS 1111729 1112697 . + 0 ID=cds-MHV1765017.1;Parent=gene-AC3ASX_06330;Dbxref=NCBI_GP:MHV1765017.1;Name=MHV1765017.1;Ontology_term=GO:0006015,GO:0009156,GO:0009165,GO:0016310,GO:0000287,GO:0004749,GO:0005524,GO:0016301,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,ribose phosphate diphosphokinase activity|0004749||IEA,ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=5-phosphoribose 1-diphosphate biosynthetic process|0006015||IEA,ribonucleoside monophosphate biosynthetic process|0009156||IEA,nucleotide biosynthetic process|0009165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014715300.1;locus_tag=AC3ASX_06330;product=ribose-phosphate pyrophosphokinase;protein_id=MHV1765017.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1112797 1113087 . + . ID=gene-AC3ASX_06335;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=AC3ASX_06335 JBYLIA010000001.1 Protein Homology CDS 1112797 1113087 . + 0 ID=cds-MHV1765018.1;Parent=gene-AC3ASX_06335;Dbxref=NCBI_GP:MHV1765018.1;Name=MHV1765018.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018840.1;locus_tag=AC3ASX_06335;product=50S ribosomal protein L25;protein_id=MHV1765018.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1113194 1114444 . + . ID=gene-AC3ASX_06340;Name=AC3ASX_06340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06340 JBYLIA010000001.1 Protein Homology CDS 1113194 1114444 . + 0 ID=cds-MHV1765019.1;Parent=gene-AC3ASX_06340;Dbxref=NCBI_GP:MHV1765019.1;Name=MHV1765019.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280889.1;locus_tag=AC3ASX_06340;product=HlyC/CorC family transporter;protein_id=MHV1765019.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1114541 1114810 . - . ID=gene-AC3ASX_06345;Name=AC3ASX_06345;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06345;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1114541 1114810 . - 0 ID=cds-AC3ASX_06345;Parent=gene-AC3ASX_06345;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014547976.1;locus_tag=AC3ASX_06345;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1114860 1115951 . - . ID=gene-AC3ASX_06350;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=AC3ASX_06350 JBYLIA010000001.1 Protein Homology CDS 1114860 1115951 . - 0 ID=cds-MHV1765020.1;Parent=gene-AC3ASX_06350;Dbxref=NCBI_GP:MHV1765020.1;Name=MHV1765020.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034020.1;locus_tag=AC3ASX_06350;product=redox-regulated ATPase YchF;protein_id=MHV1765020.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1115963 1116841 . - . ID=gene-AC3ASX_06355;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=AC3ASX_06355 JBYLIA010000001.1 Protein Homology CDS 1115963 1116841 . - 0 ID=cds-MHV1765021.1;Parent=gene-AC3ASX_06355;Dbxref=NCBI_GP:MHV1765021.1;Name=MHV1765021.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549854.1;locus_tag=AC3ASX_06355;product=aminoacyl-tRNA hydrolase;protein_id=MHV1765021.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1116829 1117299 . - . ID=gene-AC3ASX_06360;Name=AC3ASX_06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06360 JBYLIA010000001.1 Protein Homology CDS 1116829 1117299 . - 0 ID=cds-MHV1765022.1;Parent=gene-AC3ASX_06360;Dbxref=NCBI_GP:MHV1765022.1;Name=MHV1765022.1;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: protein motif:HMM:NF024748.8;locus_tag=AC3ASX_06360;product=serine hydrolase;protein_id=MHV1765022.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1117428 1118269 . - . ID=gene-AC3ASX_06365;Name=AC3ASX_06365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06365;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1117428 1118269 . - 0 ID=cds-AC3ASX_06365;Parent=gene-AC3ASX_06365;Note=frameshifted%3B internal stop;Ontology_term=GO:0003756;gbkey=CDS;go_function=protein disulfide isomerase activity|0003756||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549853.1;locus_tag=AC3ASX_06365;product=DsbC family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1118279 1119127 . - . ID=gene-AC3ASX_06370;Name=AC3ASX_06370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06370 JBYLIA010000001.1 Protein Homology CDS 1118279 1119127 . - 0 ID=cds-MHV1765023.1;Parent=gene-AC3ASX_06370;Dbxref=NCBI_GP:MHV1765023.1;Name=MHV1765023.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003042564.1;locus_tag=AC3ASX_06370;product=prepilin peptidase;protein_id=MHV1765023.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1119129 1120529 . - . ID=gene-AC3ASX_06375;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=AC3ASX_06375 JBYLIA010000001.1 Protein Homology CDS 1119129 1120529 . - 0 ID=cds-MHV1765024.1;Parent=gene-AC3ASX_06375;Dbxref=NCBI_GP:MHV1765024.1;Name=MHV1765024.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026207.1;locus_tag=AC3ASX_06375;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=MHV1765024.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1120879 1121043 . - . ID=gene-AC3ASX_06380;Name=AC3ASX_06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06380 JBYLIA010000001.1 GeneMarkS-2+ CDS 1120879 1121043 . - 0 ID=cds-MHV1765025.1;Parent=gene-AC3ASX_06380;Dbxref=NCBI_GP:MHV1765025.1;Name=MHV1765025.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_06380;product=hypothetical protein;protein_id=MHV1765025.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1121624 1121767 . - . ID=gene-AC3ASX_06385;Name=AC3ASX_06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06385 JBYLIA010000001.1 GeneMarkS-2+ CDS 1121624 1121767 . - 0 ID=cds-MHV1765026.1;Parent=gene-AC3ASX_06385;Dbxref=NCBI_GP:MHV1765026.1;Name=MHV1765026.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_06385;product=hypothetical protein;protein_id=MHV1765026.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1121839 1122177 . - . ID=gene-AC3ASX_06390;Name=AC3ASX_06390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06390 JBYLIA010000001.1 GeneMarkS-2+ CDS 1121839 1122177 . - 0 ID=cds-MHV1765027.1;Parent=gene-AC3ASX_06390;Dbxref=NCBI_GP:MHV1765027.1;Name=MHV1765027.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_06390;product=hypothetical protein;protein_id=MHV1765027.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1122965 1123138 . - . ID=gene-AC3ASX_06395;Name=AC3ASX_06395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06395 JBYLIA010000001.1 GeneMarkS-2+ CDS 1122965 1123138 . - 0 ID=cds-MHV1765028.1;Parent=gene-AC3ASX_06395;Dbxref=NCBI_GP:MHV1765028.1;Name=MHV1765028.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_06395;product=hypothetical protein;protein_id=MHV1765028.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1123337 1124698 . - . ID=gene-AC3ASX_06400;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=AC3ASX_06400 JBYLIA010000001.1 Protein Homology CDS 1123337 1124698 . - 0 ID=cds-MHV1765029.1;Parent=gene-AC3ASX_06400;Dbxref=NCBI_GP:MHV1765029.1;Name=MHV1765029.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549847.1;locus_tag=AC3ASX_06400;product=ATP-dependent protease ATPase subunit HslU;protein_id=MHV1765029.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1124706 1125257 . - . ID=gene-AC3ASX_06405;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=AC3ASX_06405 JBYLIA010000001.1 Protein Homology CDS 1124706 1125257 . - 0 ID=cds-MHV1765030.1;Parent=gene-AC3ASX_06405;Dbxref=NCBI_GP:MHV1765030.1;Name=MHV1765030.1;Ontology_term=GO:0030163,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=protein catabolic process|0030163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013923288.1;locus_tag=AC3ASX_06405;product=ATP-dependent protease subunit HslV;protein_id=MHV1765030.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1125447 1126196 . + . ID=gene-AC3ASX_06410;Name=AC3ASX_06410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06410 JBYLIA010000001.1 Protein Homology CDS 1125447 1126196 . + 0 ID=cds-MHV1765031.1;Parent=gene-AC3ASX_06410;Dbxref=NCBI_GP:MHV1765031.1;Name=MHV1765031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015775.1;locus_tag=AC3ASX_06410;product=hypothetical protein;protein_id=MHV1765031.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1126278 1127180 . - . ID=gene-AC3ASX_06415;Name=AC3ASX_06415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06415 JBYLIA010000001.1 Protein Homology CDS 1126278 1127180 . - 0 ID=cds-MHV1765032.1;Parent=gene-AC3ASX_06415;Dbxref=NCBI_GP:MHV1765032.1;Name=MHV1765032.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280899.1;locus_tag=AC3ASX_06415;product=lipoyl protein ligase domain-containing protein;protein_id=MHV1765032.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1127293 1128483 . + . ID=gene-AC3ASX_06420;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=AC3ASX_06420 JBYLIA010000001.1 Protein Homology CDS 1127293 1128483 . + 0 ID=cds-MHV1765033.1;Parent=gene-AC3ASX_06420;Dbxref=NCBI_GP:MHV1765033.1;Name=MHV1765033.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020488.1;locus_tag=AC3ASX_06420;product=tyrosine--tRNA ligase;protein_id=MHV1765033.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1128497 1128661 . + . ID=gene-AC3ASX_06425;Name=AC3ASX_06425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06425 JBYLIA010000001.1 Protein Homology CDS 1128497 1128661 . + 0 ID=cds-MHV1765034.1;Parent=gene-AC3ASX_06425;Dbxref=NCBI_GP:MHV1765034.1;Name=MHV1765034.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014715316.1;locus_tag=AC3ASX_06425;product=hypothetical protein;protein_id=MHV1765034.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1128902 1129216 . + . ID=gene-AC3ASX_06430;Name=AC3ASX_06430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06430 JBYLIA010000001.1 GeneMarkS-2+ CDS 1128902 1129216 . + 0 ID=cds-MHV1765035.1;Parent=gene-AC3ASX_06430;Dbxref=NCBI_GP:MHV1765035.1;Name=MHV1765035.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_06430;product=hypothetical protein;protein_id=MHV1765035.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1129312 1129635 . + . ID=gene-AC3ASX_06435;Name=AC3ASX_06435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06435 JBYLIA010000001.1 Protein Homology CDS 1129312 1129635 . + 0 ID=cds-MHV1765036.1;Parent=gene-AC3ASX_06435;Dbxref=NCBI_GP:MHV1765036.1;Name=MHV1765036.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF015431.7;locus_tag=AC3ASX_06435;product=LysR family transcriptional regulator substrate-binding protein;protein_id=MHV1765036.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1129638 1130003 . - . ID=gene-AC3ASX_06440;Name=AC3ASX_06440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06440;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1129638 1130003 . - 0 ID=cds-AC3ASX_06440;Parent=gene-AC3ASX_06440;Note=frameshifted%3B internal stop;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014715324.1;locus_tag=AC3ASX_06440;product=RNA-binding S4 domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1130122 1130928 . + . ID=gene-AC3ASX_06445;Name=AC3ASX_06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06445 JBYLIA010000001.1 Protein Homology CDS 1130122 1130928 . + 0 ID=cds-MHV1765037.1;Parent=gene-AC3ASX_06445;Dbxref=NCBI_GP:MHV1765037.1;Name=MHV1765037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016600.1;locus_tag=AC3ASX_06445;product=DUF2797 domain-containing protein;protein_id=MHV1765037.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1130972 1131088 . + . ID=gene-AC3ASX_06450;Name=AC3ASX_06450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06450;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1130972 1131088 . + 0 ID=cds-AC3ASX_06450;Parent=gene-AC3ASX_06450;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF012946.6;locus_tag=AC3ASX_06450;product=FAD-dependent oxidoreductase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1131528 1131689 . + . ID=gene-AC3ASX_06455;Name=AC3ASX_06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06455 JBYLIA010000001.1 GeneMarkS-2+ CDS 1131528 1131689 . + 0 ID=cds-MHV1765038.1;Parent=gene-AC3ASX_06455;Dbxref=NCBI_GP:MHV1765038.1;Name=MHV1765038.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_06455;product=hypothetical protein;protein_id=MHV1765038.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1131734 1131862 . - . ID=gene-AC3ASX_06460;Name=AC3ASX_06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06460 JBYLIA010000001.1 GeneMarkS-2+ CDS 1131734 1131862 . - 0 ID=cds-MHV1765039.1;Parent=gene-AC3ASX_06460;Dbxref=NCBI_GP:MHV1765039.1;Name=MHV1765039.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_06460;product=hypothetical protein;protein_id=MHV1765039.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1132261 1132683 . - . ID=gene-AC3ASX_06465;Name=AC3ASX_06465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06465 JBYLIA010000001.1 Protein Homology CDS 1132261 1132683 . - 0 ID=cds-MHV1765040.1;Parent=gene-AC3ASX_06465;Dbxref=NCBI_GP:MHV1765040.1;Name=MHV1765040.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF016513.7;locus_tag=AC3ASX_06465;product=FUSC family protein;protein_id=MHV1765040.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1133061 1133294 . - . ID=gene-AC3ASX_06470;Name=AC3ASX_06470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06470 JBYLIA010000001.1 GeneMarkS-2+ CDS 1133061 1133294 . - 0 ID=cds-MHV1765041.1;Parent=gene-AC3ASX_06470;Dbxref=NCBI_GP:MHV1765041.1;Name=MHV1765041.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_06470;product=hypothetical protein;protein_id=MHV1765041.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1133324 1133746 . - . ID=gene-AC3ASX_06475;Name=AC3ASX_06475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06475 JBYLIA010000001.1 Protein Homology CDS 1133324 1133746 . - 0 ID=cds-MHV1765042.1;Parent=gene-AC3ASX_06475;Dbxref=NCBI_GP:MHV1765042.1;Name=MHV1765042.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF016513.7;locus_tag=AC3ASX_06475;product=FUSC family protein;protein_id=MHV1765042.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1133885 1134739 . - . ID=gene-AC3ASX_06480;Name=AC3ASX_06480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06480;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1133885 1134739 . - 0 ID=cds-AC3ASX_06480;Parent=gene-AC3ASX_06480;Note=frameshifted%3B internal stop;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025648.1;locus_tag=AC3ASX_06480;product=efflux RND transporter periplasmic adaptor subunit;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1134741 1134938 . - . ID=gene-AC3ASX_06485;Name=AC3ASX_06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06485 JBYLIA010000001.1 Protein Homology CDS 1134741 1134938 . - 0 ID=cds-MHV1765043.1;Parent=gene-AC3ASX_06485;Dbxref=NCBI_GP:MHV1765043.1;Name=MHV1765043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003023515.1;locus_tag=AC3ASX_06485;product=hypothetical protein;protein_id=MHV1765043.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1135130 1135868 . + . ID=gene-AC3ASX_06490;Name=AC3ASX_06490;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06490;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1135130 1135868 . + 0 ID=cds-AC3ASX_06490;Parent=gene-AC3ASX_06490;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280911.1;locus_tag=AC3ASX_06490;product=IclR family transcriptional regulator;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1136033 1136974 . - . ID=gene-AC3ASX_06495;Name=AC3ASX_06495;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06495;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1136033 1136974 . - 0 ID=cds-AC3ASX_06495;Parent=gene-AC3ASX_06495;Note=frameshifted%3B internal stop;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549622.1;locus_tag=AC3ASX_06495;product=alpha/beta hydrolase fold domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1137218 1138206 . + . ID=gene-AC3ASX_06500;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=pseudogene;locus_tag=AC3ASX_06500;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1137218 1138206 . + 0 ID=cds-AC3ASX_06500;Parent=gene-AC3ASX_06500;Note=frameshifted%3B internal stop;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548012.1;locus_tag=AC3ASX_06500;product=EF-P beta-lysylation protein EpmB;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1138692 1138823 . - . ID=gene-AC3ASX_06505;Name=AC3ASX_06505;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06505;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1138692 1138823 . - 0 ID=cds-AC3ASX_06505;Parent=gene-AC3ASX_06505;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF024750.7;locus_tag=AC3ASX_06505;product=Arm DNA-binding domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1139084 1139160 . - . ID=gene-AC3ASX_06510;Name=AC3ASX_06510;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_06510 JBYLIA010000001.1 tRNAscan-SE tRNA 1139084 1139160 . - . ID=rna-AC3ASX_06510;Parent=gene-AC3ASX_06510;anticodon=(pos:complement(1139124..1139126));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_06510;product=tRNA-Val JBYLIA010000001.1 tRNAscan-SE exon 1139084 1139160 . - . ID=exon-AC3ASX_06510-1;Parent=rna-AC3ASX_06510;anticodon=(pos:complement(1139124..1139126));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_06510;product=tRNA-Val JBYLIA010000001.1 Genbank gene 1139293 1139847 . + . ID=gene-AC3ASX_06515;Name=AC3ASX_06515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06515 JBYLIA010000001.1 Protein Homology CDS 1139293 1139847 . + 0 ID=cds-MHV1765044.1;Parent=gene-AC3ASX_06515;Dbxref=NCBI_GP:MHV1765044.1;Name=MHV1765044.1;Ontology_term=GO:0006629,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549683.1;locus_tag=AC3ASX_06515;product=sterol desaturase family protein;protein_id=MHV1765044.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1139912 1140277 . + . ID=gene-AC3ASX_06520;Name=AC3ASX_06520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06520 JBYLIA010000001.1 Protein Homology CDS 1139912 1140277 . + 0 ID=cds-MHV1765045.1;Parent=gene-AC3ASX_06520;Dbxref=NCBI_GP:MHV1765045.1;Name=MHV1765045.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046568.4;locus_tag=AC3ASX_06520;product=hypothetical protein;protein_id=MHV1765045.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1140518 1140784 . + . ID=gene-AC3ASX_06525;Name=AC3ASX_06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06525 JBYLIA010000001.1 Protein Homology CDS 1140518 1140784 . + 0 ID=cds-MHV1765046.1;Parent=gene-AC3ASX_06525;Dbxref=NCBI_GP:MHV1765046.1;Name=MHV1765046.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013347.7;locus_tag=AC3ASX_06525;product=hypothetical protein;protein_id=MHV1765046.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1140840 1141160 . + . ID=gene-AC3ASX_06530;Name=AC3ASX_06530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06530 JBYLIA010000001.1 GeneMarkS-2+ CDS 1140840 1141160 . + 0 ID=cds-MHV1765047.1;Parent=gene-AC3ASX_06530;Dbxref=NCBI_GP:MHV1765047.1;Name=MHV1765047.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_06530;product=hypothetical protein;protein_id=MHV1765047.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1141121 1141372 . + . ID=gene-AC3ASX_06535;Name=AC3ASX_06535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06535 JBYLIA010000001.1 GeneMarkS-2+ CDS 1141121 1141372 . + 0 ID=cds-MHV1765048.1;Parent=gene-AC3ASX_06535;Dbxref=NCBI_GP:MHV1765048.1;Name=MHV1765048.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_06535;product=hypothetical protein;protein_id=MHV1765048.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1141566 1141877 . + . ID=gene-AC3ASX_06540;Name=AC3ASX_06540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06540 JBYLIA010000001.1 Protein Homology CDS 1141566 1141877 . + 0 ID=cds-MHV1765049.1;Parent=gene-AC3ASX_06540;Dbxref=NCBI_GP:MHV1765049.1;Name=MHV1765049.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015559.7;locus_tag=AC3ASX_06540;product=RsmD family RNA methyltransferase;protein_id=MHV1765049.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1142130 1142528 . + . ID=gene-AC3ASX_06545;Name=fvfA;gbkey=Gene;gene=fvfA;gene_biotype=protein_coding;locus_tag=AC3ASX_06545 JBYLIA010000001.1 Protein Homology CDS 1142130 1142528 . + 0 ID=cds-MHV1765050.1;Parent=gene-AC3ASX_06545;Dbxref=NCBI_GP:MHV1765050.1;Name=MHV1765050.1;gbkey=CDS;gene=fvfA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429479.1;locus_tag=AC3ASX_06545;product=Francisella virulence factor A;protein_id=MHV1765050.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1142533 1143474 . + . ID=gene-AC3ASX_06550;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=AC3ASX_06550 JBYLIA010000001.1 Protein Homology CDS 1142533 1143474 . + 0 ID=cds-MHV1765051.1;Parent=gene-AC3ASX_06550;Dbxref=NCBI_GP:MHV1765051.1;Name=MHV1765051.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548283.1;locus_tag=AC3ASX_06550;product=methionyl-tRNA formyltransferase;protein_id=MHV1765051.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1143479 1144432 . + . ID=gene-AC3ASX_06555;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=AC3ASX_06555 JBYLIA010000001.1 Protein Homology CDS 1143479 1144432 . + 0 ID=cds-MHV1765052.1;Parent=gene-AC3ASX_06555;Dbxref=NCBI_GP:MHV1765052.1;Name=MHV1765052.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003039000.1;locus_tag=AC3ASX_06555;product=glutathione synthase;protein_id=MHV1765052.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1144443 1145744 . + . ID=gene-AC3ASX_06560;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=AC3ASX_06560 JBYLIA010000001.1 Protein Homology CDS 1144443 1145744 . + 0 ID=cds-MHV1765053.1;Parent=gene-AC3ASX_06560;Dbxref=NCBI_GP:MHV1765053.1;Name=MHV1765053.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003039002.1;locus_tag=AC3ASX_06560;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=MHV1765053.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1145753 1146094 . + . ID=gene-AC3ASX_06565;Name=AC3ASX_06565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06565 JBYLIA010000001.1 GeneMarkS-2+ CDS 1145753 1146094 . + 0 ID=cds-MHV1765054.1;Parent=gene-AC3ASX_06565;Dbxref=NCBI_GP:MHV1765054.1;Name=MHV1765054.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_06565;product=hypothetical protein;protein_id=MHV1765054.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1146306 1147973 . - . ID=gene-AC3ASX_06570;Name=AC3ASX_06570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06570 JBYLIA010000001.1 Protein Homology CDS 1146306 1147973 . - 0 ID=cds-MHV1765055.1;Parent=gene-AC3ASX_06570;Dbxref=NCBI_GP:MHV1765055.1;Name=MHV1765055.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036341.1;locus_tag=AC3ASX_06570;product=glycoside hydrolase family 3 protein;protein_id=MHV1765055.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1148641 1149009 . - . ID=gene-AC3ASX_06575;Name=AC3ASX_06575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06575 JBYLIA010000001.1 Protein Homology CDS 1148641 1149009 . - 0 ID=cds-MHV1765056.1;Parent=gene-AC3ASX_06575;Dbxref=NCBI_GP:MHV1765056.1;Name=MHV1765056.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: protein motif:HMM:NF018066.7;locus_tag=AC3ASX_06575;product=acetoacetate decarboxylase family protein;protein_id=MHV1765056.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1149272 1150458 . + . ID=gene-AC3ASX_06580;Name=AC3ASX_06580;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06580;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1149272 1150458 . + 0 ID=cds-AC3ASX_06580;Parent=gene-AC3ASX_06580;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003039011.1;locus_tag=AC3ASX_06580;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1150473 1151355 . + . ID=gene-AC3ASX_06585;Name=AC3ASX_06585;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06585;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1150473 1151355 . + 0 ID=cds-AC3ASX_06585;Parent=gene-AC3ASX_06585;Note=frameshifted%3B internal stop;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013923072.1;locus_tag=AC3ASX_06585;product=ROK family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1151433 1151855 . + . ID=gene-AC3ASX_06590;Name=AC3ASX_06590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06590 JBYLIA010000001.1 Protein Homology CDS 1151433 1151855 . + 0 ID=cds-MHV1765057.1;Parent=gene-AC3ASX_06590;Dbxref=NCBI_GP:MHV1765057.1;Name=MHV1765057.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015084.7;locus_tag=AC3ASX_06590;product=HTH domain-containing protein;protein_id=MHV1765057.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1151886 1152179 . + . ID=gene-AC3ASX_06595;Name=AC3ASX_06595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06595 JBYLIA010000001.1 GeneMarkS-2+ CDS 1151886 1152179 . + 0 ID=cds-MHV1765058.1;Parent=gene-AC3ASX_06595;Dbxref=NCBI_GP:MHV1765058.1;Name=MHV1765058.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_06595;product=hypothetical protein;protein_id=MHV1765058.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1152252 1152929 . - . ID=gene-AC3ASX_06600;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=AC3ASX_06600 JBYLIA010000001.1 Protein Homology CDS 1152252 1152929 . - 0 ID=cds-MHV1765059.1;Parent=gene-AC3ASX_06600;Dbxref=NCBI_GP:MHV1765059.1;Name=MHV1765059.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012281079.1;locus_tag=AC3ASX_06600;product=dethiobiotin synthase;protein_id=MHV1765059.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1152936 1153673 . - . ID=gene-AC3ASX_06605;Name=AC3ASX_06605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06605 JBYLIA010000001.1 Protein Homology CDS 1152936 1153673 . - 0 ID=cds-MHV1765060.1;Parent=gene-AC3ASX_06605;Dbxref=NCBI_GP:MHV1765060.1;Name=MHV1765060.1;Ontology_term=GO:0032259,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549692.1;locus_tag=AC3ASX_06605;product=methyltransferase domain-containing protein;protein_id=MHV1765060.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1153651 1154778 . - . ID=gene-AC3ASX_06610;Name=AC3ASX_06610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06610 JBYLIA010000001.1 Protein Homology CDS 1153651 1154778 . - 0 ID=cds-MHV1765061.1;Parent=gene-AC3ASX_06610;Dbxref=NCBI_GP:MHV1765061.1;Name=MHV1765061.1;Ontology_term=GO:0016747,GO:0030170;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549693.1;locus_tag=AC3ASX_06610;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=MHV1765061.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1154772 1155713 . - . ID=gene-AC3ASX_06615;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=AC3ASX_06615 JBYLIA010000001.1 Protein Homology CDS 1154772 1155713 . - 0 ID=cds-MHV1765062.1;Parent=gene-AC3ASX_06615;Dbxref=NCBI_GP:MHV1765062.1;Name=MHV1765062.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549694.1;locus_tag=AC3ASX_06615;product=biotin synthase BioB;protein_id=MHV1765062.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1155804 1157099 . + . ID=gene-AC3ASX_06620;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=AC3ASX_06620 JBYLIA010000001.1 Protein Homology CDS 1155804 1157099 . + 0 ID=cds-MHV1765063.1;Parent=gene-AC3ASX_06620;Dbxref=NCBI_GP:MHV1765063.1;Name=MHV1765063.1;Ontology_term=GO:0009102,GO:0004015;gbkey=CDS;gene=bioA;go_function=S-adenosyl-L-methionine:8-amino-7-oxononanoate transaminase activity|0004015||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016405.1;locus_tag=AC3ASX_06620;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=MHV1765063.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1157106 1157606 . - . ID=gene-AC3ASX_06625;Name=AC3ASX_06625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06625;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1157106 1157606 . - 0 ID=cds-AC3ASX_06625;Parent=gene-AC3ASX_06625;Note=frameshifted%3B internal stop;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033687.1;locus_tag=AC3ASX_06625;product=PaaI family thioesterase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1157623 1158543 . - . ID=gene-AC3ASX_06630;Name=bioJ;gbkey=Gene;gene=bioJ;gene_biotype=protein_coding;locus_tag=AC3ASX_06630 JBYLIA010000001.1 Protein Homology CDS 1157623 1158543 . - 0 ID=cds-MHV1765064.1;Parent=gene-AC3ASX_06630;Dbxref=NCBI_GP:MHV1765064.1;Name=MHV1765064.1;gbkey=CDS;gene=bioJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003039032.1;locus_tag=AC3ASX_06630;product=pimeloyl-ACP methyl ester esterase BioJ;protein_id=MHV1765064.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1158556 1159821 . - . ID=gene-AC3ASX_06635;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=AC3ASX_06635 JBYLIA010000001.1 Protein Homology CDS 1158556 1159821 . - 0 ID=cds-MHV1765065.1;Parent=gene-AC3ASX_06635;Dbxref=NCBI_GP:MHV1765065.1;Name=MHV1765065.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036381.1;locus_tag=AC3ASX_06635;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=MHV1765065.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1159823 1160176 . - . ID=gene-AC3ASX_06640;Name=AC3ASX_06640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06640 JBYLIA010000001.1 Protein Homology CDS 1159823 1160176 . - 0 ID=cds-MHV1765066.1;Parent=gene-AC3ASX_06640;Dbxref=NCBI_GP:MHV1765066.1;Name=MHV1765066.1;Ontology_term=GO:0046654,GO:0046656,GO:0004150;gbkey=CDS;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA,folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429542.1;locus_tag=AC3ASX_06640;product=dihydroneopterin aldolase;protein_id=MHV1765066.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1160253 1161623 . + . ID=gene-AC3ASX_06645;Name=AC3ASX_06645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06645 JBYLIA010000001.1 Protein Homology CDS 1160253 1161623 . + 0 ID=cds-MHV1765067.1;Parent=gene-AC3ASX_06645;Dbxref=NCBI_GP:MHV1765067.1;Name=MHV1765067.1;Ontology_term=GO:0005524,GO:0016874;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549700.1;locus_tag=AC3ASX_06645;product=class I adenylate-forming enzyme family protein;protein_id=MHV1765067.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1161616 1163385 . + . ID=gene-AC3ASX_06650;Name=AC3ASX_06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06650 JBYLIA010000001.1 Protein Homology CDS 1161616 1163385 . + 0 ID=cds-MHV1765068.1;Parent=gene-AC3ASX_06650;Dbxref=NCBI_GP:MHV1765068.1;Name=MHV1765068.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036390.1;locus_tag=AC3ASX_06650;product=bifunctional chorismate-binding protein/class IV aminotransferase;protein_id=MHV1765068.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1163387 1163941 . + . ID=gene-AC3ASX_06655;Name=AC3ASX_06655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06655 JBYLIA010000001.1 Protein Homology CDS 1163387 1163941 . + 0 ID=cds-MHV1765069.1;Parent=gene-AC3ASX_06655;Dbxref=NCBI_GP:MHV1765069.1;Name=MHV1765069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549702.1;locus_tag=AC3ASX_06655;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=MHV1765069.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1164667 1165068 . - . ID=gene-AC3ASX_06660;Name=AC3ASX_06660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06660;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1164667 1165068 . - 0 ID=cds-AC3ASX_06660;Parent=gene-AC3ASX_06660;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013923087.1;locus_tag=AC3ASX_06660;product=aldo/keto reductase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1165061 1165597 . - . ID=gene-AC3ASX_06665;Name=AC3ASX_06665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06665;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1165061 1165597 . - 0 ID=cds-AC3ASX_06665;Parent=gene-AC3ASX_06665;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014367951.1;locus_tag=AC3ASX_06665;product=nitrilase-related carbon-nitrogen hydrolase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1165721 1166143 . - . ID=gene-AC3ASX_06670;Name=AC3ASX_06670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06670;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1165721 1166143 . - 0 ID=cds-AC3ASX_06670;Parent=gene-AC3ASX_06670;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036409.1;locus_tag=AC3ASX_06670;product=EbhA protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1166277 1166972 . - . ID=gene-AC3ASX_06675;Name=AC3ASX_06675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06675 JBYLIA010000001.1 Protein Homology CDS 1166277 1166972 . - 0 ID=cds-MHV1765070.1;Parent=gene-AC3ASX_06675;Dbxref=NCBI_GP:MHV1765070.1;Name=MHV1765070.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549708.1;locus_tag=AC3ASX_06675;product=YdcF family protein;protein_id=MHV1765070.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1166986 1167606 . - . ID=gene-AC3ASX_06680;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=AC3ASX_06680 JBYLIA010000001.1 Protein Homology CDS 1166986 1167606 . - 0 ID=cds-MHV1765071.1;Parent=gene-AC3ASX_06680;Dbxref=NCBI_GP:MHV1765071.1;Name=MHV1765071.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016388.1;locus_tag=AC3ASX_06680;product=GTP cyclohydrolase I FolE;protein_id=MHV1765071.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1167715 1168630 . + . ID=gene-AC3ASX_06685;Name=AC3ASX_06685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06685;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1167715 1168630 . + 0 ID=cds-AC3ASX_06685;Parent=gene-AC3ASX_06685;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010030669.1;locus_tag=AC3ASX_06685;product=helicase-related protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1168627 1168947 . - . ID=gene-AC3ASX_06690;Name=AC3ASX_06690;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06690;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1168627 1168947 . - 0 ID=cds-AC3ASX_06690;Parent=gene-AC3ASX_06690;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003042330.1;locus_tag=AC3ASX_06690;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1168971 1170039 . - . ID=gene-AC3ASX_06695;Name=AC3ASX_06695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06695;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1168971 1170039 . - 0 ID=cds-AC3ASX_06695;Parent=gene-AC3ASX_06695;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0015833,GO:0015333,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=peptide:proton symporter activity|0015333||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003042330.1;locus_tag=AC3ASX_06695;product=oligopeptide:H+ symporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1170147 1170418 . - . ID=gene-AC3ASX_06700;Name=AC3ASX_06700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06700;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1170147 1170418 . - 0 ID=cds-AC3ASX_06700;Parent=gene-AC3ASX_06700;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287795.1;locus_tag=AC3ASX_06700;product=heavy metal-binding domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1170563 1171924 . - . ID=gene-AC3ASX_06705;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=AC3ASX_06705 JBYLIA010000001.1 Protein Homology CDS 1170563 1171924 . - 0 ID=cds-MHV1765072.1;Parent=gene-AC3ASX_06705;Dbxref=NCBI_GP:MHV1765072.1;Name=MHV1765072.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015083942.1;locus_tag=AC3ASX_06705;product=glutathione-disulfide reductase;protein_id=MHV1765072.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1171917 1172681 . - . ID=gene-AC3ASX_06710;Name=AC3ASX_06710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06710 JBYLIA010000001.1 Protein Homology CDS 1171917 1172681 . - 0 ID=cds-MHV1765073.1;Parent=gene-AC3ASX_06710;Dbxref=NCBI_GP:MHV1765073.1;Name=MHV1765073.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012281059.1;locus_tag=AC3ASX_06710;product=2'-5' RNA ligase family protein;protein_id=MHV1765073.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1172996 1173184 . - . ID=gene-AC3ASX_06715;Name=AC3ASX_06715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06715 JBYLIA010000001.1 GeneMarkS-2+ CDS 1172996 1173184 . - 0 ID=cds-MHV1765074.1;Parent=gene-AC3ASX_06715;Dbxref=NCBI_GP:MHV1765074.1;Name=MHV1765074.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_06715;product=hypothetical protein;protein_id=MHV1765074.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1173668 1174457 . - . ID=gene-AC3ASX_06720;Name=AC3ASX_06720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06720;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1173668 1174457 . - 0 ID=cds-AC3ASX_06720;Parent=gene-AC3ASX_06720;Note=frameshifted;Ontology_term=GO:0006281,GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003016367.1;locus_tag=AC3ASX_06720;product=exodeoxyribonuclease III;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1174792 1175142 . + . ID=gene-AC3ASX_06725;Name=AC3ASX_06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06725 JBYLIA010000001.1 GeneMarkS-2+ CDS 1174792 1175142 . + 0 ID=cds-MHV1765075.1;Parent=gene-AC3ASX_06725;Dbxref=NCBI_GP:MHV1765075.1;Name=MHV1765075.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_06725;product=M14 family metallopeptidase;protein_id=MHV1765075.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1175127 1175348 . + . ID=gene-AC3ASX_06730;Name=AC3ASX_06730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06730 JBYLIA010000001.1 GeneMarkS-2+ CDS 1175127 1175348 . + 0 ID=cds-MHV1765076.1;Parent=gene-AC3ASX_06730;Dbxref=NCBI_GP:MHV1765076.1;Name=MHV1765076.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_06730;product=hypothetical protein;protein_id=MHV1765076.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1175682 1176246 . + . ID=gene-AC3ASX_06735;Name=AC3ASX_06735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06735;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1175682 1176246 . + 0 ID=cds-AC3ASX_06735;Parent=gene-AC3ASX_06735;Note=frameshifted%3B internal stop;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013923102.1;locus_tag=AC3ASX_06735;product=NAD(P)H-dependent oxidoreductase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1177797 1178891 . - . ID=gene-AC3ASX_06740;Name=AC3ASX_06740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06740 JBYLIA010000001.1 Protein Homology CDS 1177797 1178891 . - 0 ID=cds-MHV1765077.1;Parent=gene-AC3ASX_06740;Dbxref=NCBI_GP:MHV1765077.1;Name=MHV1765077.1;Ontology_term=GO:0009073,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012119001.1;locus_tag=AC3ASX_06740;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=MHV1765077.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1178922 1180298 . - . ID=gene-AC3ASX_06745;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=AC3ASX_06745 JBYLIA010000001.1 Protein Homology CDS 1178922 1180298 . - 0 ID=cds-MHV1765078.1;Parent=gene-AC3ASX_06745;Dbxref=NCBI_GP:MHV1765078.1;Name=MHV1765078.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012281050.1;locus_tag=AC3ASX_06745;product=signal recognition particle protein;protein_id=MHV1765078.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1180389 1180655 . - . ID=gene-AC3ASX_06750;Name=AC3ASX_06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06750 JBYLIA010000001.1 Protein Homology CDS 1180389 1180655 . - 0 ID=cds-MHV1765079.1;Parent=gene-AC3ASX_06750;Dbxref=NCBI_GP:MHV1765079.1;Name=MHV1765079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011733654.1;locus_tag=AC3ASX_06750;product=DUF1634 domain-containing protein;protein_id=MHV1765079.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1180652 1181491 . - . ID=gene-AC3ASX_06755;Name=AC3ASX_06755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06755 JBYLIA010000001.1 Protein Homology CDS 1180652 1181491 . - 0 ID=cds-MHV1765080.1;Parent=gene-AC3ASX_06755;Dbxref=NCBI_GP:MHV1765080.1;Name=MHV1765080.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549718.1;locus_tag=AC3ASX_06755;product=sulfite exporter TauE/SafE family protein;protein_id=MHV1765080.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1181642 1181860 . + . ID=gene-AC3ASX_06760;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=AC3ASX_06760 JBYLIA010000001.1 Protein Homology CDS 1181642 1181860 . + 0 ID=cds-MHV1765081.1;Parent=gene-AC3ASX_06760;Dbxref=NCBI_GP:MHV1765081.1;Name=MHV1765081.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011468168.1;locus_tag=AC3ASX_06760;product=translation initiation factor IF-1;protein_id=MHV1765081.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1182057 1182140 . - . ID=gene-AC3ASX_06765;Name=AC3ASX_06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06765 JBYLIA010000001.1 Protein Homology CDS 1182057 1182140 . - 0 ID=cds-MHV1765082.1;Parent=gene-AC3ASX_06765;Dbxref=NCBI_GP:MHV1765082.1;Name=MHV1765082.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015889.7;locus_tag=AC3ASX_06765;product=hypothetical protein;protein_id=MHV1765082.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1182809 1184248 . - . ID=gene-AC3ASX_06770;Name=AC3ASX_06770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06770 JBYLIA010000001.1 Protein Homology CDS 1182809 1184248 . - 0 ID=cds-MHV1765083.1;Parent=gene-AC3ASX_06770;Dbxref=NCBI_GP:MHV1765083.1;Name=MHV1765083.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021043.1;locus_tag=AC3ASX_06770;product=APC family permease;protein_id=MHV1765083.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1184307 1185680 . - . ID=gene-AC3ASX_06775;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=AC3ASX_06775 JBYLIA010000001.1 Protein Homology CDS 1184307 1185680 . - 0 ID=cds-MHV1765084.1;Parent=gene-AC3ASX_06775;Dbxref=NCBI_GP:MHV1765084.1;Name=MHV1765084.1;Ontology_term=GO:0006813,GO:0015079,GO:0005886;gbkey=CDS;gene=trkA;go_component=plasma membrane|0005886||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014715448.1;locus_tag=AC3ASX_06775;product=Trk system potassium transporter TrkA;protein_id=MHV1765084.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1185833 1186243 . + . ID=gene-AC3ASX_06780;Name=AC3ASX_06780;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06780;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1185833 1186243 . + 0 ID=cds-AC3ASX_06780;Parent=gene-AC3ASX_06780;Note=frameshifted;Ontology_term=GO:0006355,GO:0016226;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549721.1;locus_tag=AC3ASX_06780;product=SUF system Fe-S cluster assembly regulator;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1186250 1187695 . + . ID=gene-AC3ASX_06785;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=AC3ASX_06785 JBYLIA010000001.1 Protein Homology CDS 1186250 1187695 . + 0 ID=cds-MHV1765085.1;Parent=gene-AC3ASX_06785;Dbxref=NCBI_GP:MHV1765085.1;Name=MHV1765085.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014715450.1;locus_tag=AC3ASX_06785;product=Fe-S cluster assembly protein SufB;protein_id=MHV1765085.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1187731 1188480 . + . ID=gene-AC3ASX_06790;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=AC3ASX_06790 JBYLIA010000001.1 Protein Homology CDS 1187731 1188480 . + 0 ID=cds-MHV1765086.1;Parent=gene-AC3ASX_06790;Dbxref=NCBI_GP:MHV1765086.1;Name=MHV1765086.1;Ontology_term=GO:0016226,GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003042373.1;locus_tag=AC3ASX_06790;product=Fe-S cluster assembly ATPase SufC;protein_id=MHV1765086.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1188493 1189641 . + . ID=gene-AC3ASX_06795;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=AC3ASX_06795 JBYLIA010000001.1 Protein Homology CDS 1188493 1189641 . + 0 ID=cds-MHV1765087.1;Parent=gene-AC3ASX_06795;Dbxref=NCBI_GP:MHV1765087.1;Name=MHV1765087.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033752.1;locus_tag=AC3ASX_06795;product=Fe-S cluster assembly protein SufD;protein_id=MHV1765087.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1189727 1190600 . + . ID=gene-AC3ASX_06800;Name=AC3ASX_06800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06800;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1189727 1190600 . + 0 ID=cds-AC3ASX_06800;Parent=gene-AC3ASX_06800;Note=frameshifted%3B internal stop;Ontology_term=GO:0016403,GO:0046872;gbkey=CDS;go_function=dimethylargininase activity|0016403||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033755.1%2CRefSeq:WP_004287772.1;locus_tag=AC3ASX_06800;product=dimethylarginine dimethylaminohydrolase family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1190604 1190926 . + . ID=gene-AC3ASX_06805;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=pseudogene;locus_tag=AC3ASX_06805;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1190604 1190926 . + 0 ID=cds-AC3ASX_06805;Parent=gene-AC3ASX_06805;Note=frameshifted%3B internal stop;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013923119.1;locus_tag=AC3ASX_06805;product=thioredoxin;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1190923 1191339 . + . ID=gene-AC3ASX_06810;Name=AC3ASX_06810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06810 JBYLIA010000001.1 Protein Homology CDS 1190923 1191339 . + 0 ID=cds-MHV1765088.1;Parent=gene-AC3ASX_06810;Dbxref=NCBI_GP:MHV1765088.1;Name=MHV1765088.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548232.1;locus_tag=AC3ASX_06810;product=DUF3293 domain-containing protein;protein_id=MHV1765088.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1191322 1191616 . - . ID=gene-AC3ASX_06815;Name=AC3ASX_06815;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06815;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1191322 1191616 . - 0 ID=cds-AC3ASX_06815;Parent=gene-AC3ASX_06815;Note=frameshifted;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033763.1;locus_tag=AC3ASX_06815;product=winged helix-turn-helix domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1191620 1192143 . - . ID=gene-AC3ASX_06820;Name=AC3ASX_06820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06820;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1191620 1192143 . - 0 ID=cds-AC3ASX_06820;Parent=gene-AC3ASX_06820;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549728.1;locus_tag=AC3ASX_06820;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1193024 1193632 . + . ID=gene-AC3ASX_06825;Name=AC3ASX_06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06825 JBYLIA010000001.1 Protein Homology CDS 1193024 1193632 . + 0 ID=cds-MHV1765089.1;Parent=gene-AC3ASX_06825;Dbxref=NCBI_GP:MHV1765089.1;Name=MHV1765089.1;Ontology_term=GO:0007165,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: protein motif:HMM:NF020037.7;locus_tag=AC3ASX_06825;product=PAS domain-containing protein;protein_id=MHV1765089.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1193894 1194025 . - . ID=gene-AC3ASX_06830;Name=AC3ASX_06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06830 JBYLIA010000001.1 GeneMarkS-2+ CDS 1193894 1194025 . - 0 ID=cds-MHV1765090.1;Parent=gene-AC3ASX_06830;Dbxref=NCBI_GP:MHV1765090.1;Name=MHV1765090.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_06830;product=hypothetical protein;protein_id=MHV1765090.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1195187 1195771 . + . ID=gene-AC3ASX_06835;Name=AC3ASX_06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06835 JBYLIA010000001.1 Protein Homology CDS 1195187 1195771 . + 0 ID=cds-MHV1765091.1;Parent=gene-AC3ASX_06835;Dbxref=NCBI_GP:MHV1765091.1;Name=MHV1765091.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021066.1;locus_tag=AC3ASX_06835;product=YqgE/AlgH family protein;protein_id=MHV1765091.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1195771 1196181 . + . ID=gene-AC3ASX_06840;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=AC3ASX_06840 JBYLIA010000001.1 Protein Homology CDS 1195771 1196181 . + 0 ID=cds-MHV1765092.1;Parent=gene-AC3ASX_06840;Dbxref=NCBI_GP:MHV1765092.1;Name=MHV1765092.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036465.1;locus_tag=AC3ASX_06840;product=Holliday junction resolvase RuvX;protein_id=MHV1765092.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1196691 1199132 . + . ID=gene-AC3ASX_06845;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=AC3ASX_06845 JBYLIA010000001.1 Protein Homology CDS 1196691 1199132 . + 0 ID=cds-MHV1765093.1;Parent=gene-AC3ASX_06845;Dbxref=NCBI_GP:MHV1765093.1;Name=MHV1765093.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012281037.1;locus_tag=AC3ASX_06845;product=leucine--tRNA ligase;protein_id=MHV1765093.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1199140 1199682 . + . ID=gene-AC3ASX_06850;Name=AC3ASX_06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06850 JBYLIA010000001.1 Protein Homology CDS 1199140 1199682 . + 0 ID=cds-MHV1765094.1;Parent=gene-AC3ASX_06850;Dbxref=NCBI_GP:MHV1765094.1;Name=MHV1765094.1;Ontology_term=GO:0015920,GO:0043165,GO:0001530;gbkey=CDS;go_function=lipopolysaccharide binding|0001530||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003026064.1;locus_tag=AC3ASX_06850;product=LPS-assembly lipoprotein LptE;protein_id=MHV1765094.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1200335 1200460 . + . ID=gene-AC3ASX_06855;Name=AC3ASX_06855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06855 JBYLIA010000001.1 GeneMarkS-2+ CDS 1200335 1200460 . + 0 ID=cds-MHV1765095.1;Parent=gene-AC3ASX_06855;Dbxref=NCBI_GP:MHV1765095.1;Name=MHV1765095.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_06855;product=hypothetical protein;protein_id=MHV1765095.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1200457 1200576 . + . ID=gene-AC3ASX_06860;Name=AC3ASX_06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06860 JBYLIA010000001.1 Protein Homology CDS 1200457 1200576 . + 0 ID=cds-MHV1765096.1;Parent=gene-AC3ASX_06860;Dbxref=NCBI_GP:MHV1765096.1;Name=MHV1765096.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013117.7;locus_tag=AC3ASX_06860;product=hypothetical protein;protein_id=MHV1765096.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1200999 1201565 . - . ID=gene-AC3ASX_06865;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=AC3ASX_06865 JBYLIA010000001.1 Protein Homology CDS 1200999 1201565 . - 0 ID=cds-MHV1765097.1;Parent=gene-AC3ASX_06865;Dbxref=NCBI_GP:MHV1765097.1;Name=MHV1765097.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010959425.1;locus_tag=AC3ASX_06865;product=dCTP deaminase;protein_id=MHV1765097.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1201578 1202438 . - . ID=gene-AC3ASX_06870;Name=AC3ASX_06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06870 JBYLIA010000001.1 Protein Homology CDS 1201578 1202438 . - 0 ID=cds-MHV1765098.1;Parent=gene-AC3ASX_06870;Dbxref=NCBI_GP:MHV1765098.1;Name=MHV1765098.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0046872,GO:0051536,GO:0140663;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA,ATP-dependent FeS chaperone activity|0140663||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003042412.1;locus_tag=AC3ASX_06870;product=Mrp/NBP35 family ATP-binding protein;protein_id=MHV1765098.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1202539 1203062 . + . ID=gene-AC3ASX_06875;Name=AC3ASX_06875;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06875;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1202539 1203062 . + 0 ID=cds-AC3ASX_06875;Parent=gene-AC3ASX_06875;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003039149.1;locus_tag=AC3ASX_06875;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1203117 1203727 . + . ID=gene-AC3ASX_06880;Name=AC3ASX_06880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06880;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1203117 1203727 . + 0 ID=cds-AC3ASX_06880;Parent=gene-AC3ASX_06880;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003039149.1;locus_tag=AC3ASX_06880;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1203781 1205211 . + . ID=gene-AC3ASX_06885;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=AC3ASX_06885 JBYLIA010000001.1 Protein Homology CDS 1203781 1205211 . + 0 ID=cds-MHV1765099.1;Parent=gene-AC3ASX_06885;Dbxref=NCBI_GP:MHV1765099.1;Name=MHV1765099.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429520.1;locus_tag=AC3ASX_06885;product=cardiolipin synthase;protein_id=MHV1765099.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1205395 1205557 . + . ID=gene-AC3ASX_06890;Name=AC3ASX_06890;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06890;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1205395 1205557 . + 0 ID=cds-AC3ASX_06890;Parent=gene-AC3ASX_06890;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021084.1;locus_tag=AC3ASX_06890;product=HAD family hydrolase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1205571 1206042 . - . ID=gene-AC3ASX_06895;Name=AC3ASX_06895;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06895;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1205571 1206042 . - 0 ID=cds-AC3ASX_06895;Parent=gene-AC3ASX_06895;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0003924,GO:0005525,GO:0046872;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033818.1;locus_tag=AC3ASX_06895;product=CobW family GTP-binding protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1206204 1206599 . + . ID=gene-AC3ASX_06900;Name=AC3ASX_06900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06900;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1206204 1206599 . + 0 ID=cds-AC3ASX_06900;Parent=gene-AC3ASX_06900;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010031846.1;locus_tag=AC3ASX_06900;product=Fur family transcriptional regulator;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1206655 1209039 . - . ID=gene-AC3ASX_06905;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=AC3ASX_06905 JBYLIA010000001.1 Protein Homology CDS 1206655 1209039 . - 0 ID=cds-MHV1765100.1;Parent=gene-AC3ASX_06905;Dbxref=NCBI_GP:MHV1765100.1;Name=MHV1765100.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014715471.1;locus_tag=AC3ASX_06905;product=phenylalanine--tRNA ligase subunit beta;protein_id=MHV1765100.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1209059 1210072 . - . ID=gene-AC3ASX_06910;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=AC3ASX_06910 JBYLIA010000001.1 Protein Homology CDS 1209059 1210072 . - 0 ID=cds-MHV1765101.1;Parent=gene-AC3ASX_06910;Dbxref=NCBI_GP:MHV1765101.1;Name=MHV1765101.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012281015.1;locus_tag=AC3ASX_06910;product=phenylalanine--tRNA ligase subunit alpha;protein_id=MHV1765101.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1211111 1211370 . + . ID=gene-AC3ASX_06915;Name=AC3ASX_06915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06915;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1211111 1211370 . + 0 ID=cds-AC3ASX_06915;Parent=gene-AC3ASX_06915;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036491.1;locus_tag=AC3ASX_06915;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1211388 1211824 . + . ID=gene-AC3ASX_06920;Name=AC3ASX_06920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06920;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1211388 1211824 . + 0 ID=cds-AC3ASX_06920;Parent=gene-AC3ASX_06920;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548193.1;locus_tag=AC3ASX_06920;product=DUF2975 domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1213454 1214500 . - . ID=gene-AC3ASX_06925;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=AC3ASX_06925 JBYLIA010000001.1 Protein Homology CDS 1213454 1214500 . - 0 ID=cds-MHV1765102.1;Parent=gene-AC3ASX_06925;Dbxref=NCBI_GP:MHV1765102.1;Name=MHV1765102.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548189.1;locus_tag=AC3ASX_06925;product=Holliday junction branch migration DNA helicase RuvB;protein_id=MHV1765102.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1214564 1215289 . - . ID=gene-AC3ASX_06930;Name=AC3ASX_06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06930 JBYLIA010000001.1 Protein Homology CDS 1214564 1215289 . - 0 ID=cds-MHV1765103.1;Parent=gene-AC3ASX_06930;Dbxref=NCBI_GP:MHV1765103.1;Name=MHV1765103.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003033794.1;locus_tag=AC3ASX_06930;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=MHV1765103.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1215404 1215994 . + . ID=gene-AC3ASX_06935;Name=AC3ASX_06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06935 JBYLIA010000001.1 Protein Homology CDS 1215404 1215994 . + 0 ID=cds-MHV1765104.1;Parent=gene-AC3ASX_06935;Dbxref=NCBI_GP:MHV1765104.1;Name=MHV1765104.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003036503.1;locus_tag=AC3ASX_06935;product=CBS domain-containing protein;protein_id=MHV1765104.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1216021 1216355 . - . ID=gene-AC3ASX_06940;Name=AC3ASX_06940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06940;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1216021 1216355 . - 0 ID=cds-AC3ASX_06940;Parent=gene-AC3ASX_06940;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021108.1;locus_tag=AC3ASX_06940;product=GDSL-type esterase/lipase family protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1216456 1218306 . - . ID=gene-AC3ASX_06945;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=AC3ASX_06945 JBYLIA010000001.1 Protein Homology CDS 1216456 1218306 . - 0 ID=cds-MHV1765105.1;Parent=gene-AC3ASX_06945;Dbxref=NCBI_GP:MHV1765105.1;Name=MHV1765105.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549773.1;locus_tag=AC3ASX_06945;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=MHV1765105.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1218386 1219936 . - . ID=gene-AC3ASX_06950;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=AC3ASX_06950 JBYLIA010000001.1 Protein Homology CDS 1218386 1219936 . - 0 ID=cds-MHV1765106.1;Parent=gene-AC3ASX_06950;Dbxref=NCBI_GP:MHV1765106.1;Name=MHV1765106.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013923167.1;locus_tag=AC3ASX_06950;product=glutamine-hydrolyzing GMP synthase;protein_id=MHV1765106.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1220023 1221578 . - . ID=gene-AC3ASX_06955;Name=AC3ASX_06955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06955;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1220023 1221578 . - 0 ID=cds-AC3ASX_06955;Parent=gene-AC3ASX_06955;Note=frameshifted%3B internal stop;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548183.1;locus_tag=AC3ASX_06955;product=APC family permease;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1221637 1222413 . - . ID=gene-AC3ASX_06960;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=AC3ASX_06960 JBYLIA010000001.1 Protein Homology CDS 1221637 1222413 . - 0 ID=cds-MHV1765107.1;Parent=gene-AC3ASX_06960;Dbxref=NCBI_GP:MHV1765107.1;Name=MHV1765107.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010031588.1;locus_tag=AC3ASX_06960;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=MHV1765107.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1222609 1222770 . - . ID=gene-AC3ASX_06965;Name=AC3ASX_06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06965 JBYLIA010000001.1 GeneMarkS-2+ CDS 1222609 1222770 . - 0 ID=cds-MHV1765108.1;Parent=gene-AC3ASX_06965;Dbxref=NCBI_GP:MHV1765108.1;Name=MHV1765108.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_06965;product=hypothetical protein;protein_id=MHV1765108.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1222706 1222876 . + . ID=gene-AC3ASX_06970;Name=AC3ASX_06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06970 JBYLIA010000001.1 Protein Homology CDS 1222706 1222876 . + 0 ID=cds-MHV1765109.1;Parent=gene-AC3ASX_06970;Dbxref=NCBI_GP:MHV1765109.1;Name=MHV1765109.1;Ontology_term=GO:0006814,GO:0006885,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: protein motif:HMM:NF018648.7;locus_tag=AC3ASX_06970;product=Na+/H+ antiporter NhaA;protein_id=MHV1765109.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1223435 1223604 . - . ID=gene-AC3ASX_06975;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=pseudogene;locus_tag=AC3ASX_06975;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1223435 1223604 . - 0 ID=cds-AC3ASX_06975;Parent=gene-AC3ASX_06975;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286370.1;locus_tag=AC3ASX_06975;product=30S ribosomal protein S21;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1223852 1224179 . + . ID=gene-AC3ASX_06980;Name=AC3ASX_06980;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06980;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1223852 1224179 . + 0 ID=cds-AC3ASX_06980;Parent=gene-AC3ASX_06980;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038896.1;locus_tag=AC3ASX_06980;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1224396 1224604 . + . ID=gene-AC3ASX_06985;Name=AC3ASX_06985;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_06985;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1224396 1224604 . + 0 ID=cds-AC3ASX_06985;Parent=gene-AC3ASX_06985;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019285.1;locus_tag=AC3ASX_06985;product=cold-shock protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1225479 1225619 . - . ID=gene-AC3ASX_06990;Name=AC3ASX_06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06990 JBYLIA010000001.1 GeneMarkS-2+ CDS 1225479 1225619 . - 0 ID=cds-MHV1765110.1;Parent=gene-AC3ASX_06990;Dbxref=NCBI_GP:MHV1765110.1;Name=MHV1765110.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_06990;product=hypothetical protein;protein_id=MHV1765110.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1226829 1226999 . - . ID=gene-AC3ASX_06995;Name=AC3ASX_06995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_06995 JBYLIA010000001.1 Protein Homology CDS 1226829 1226999 . - 0 ID=cds-MHV1765111.1;Parent=gene-AC3ASX_06995;Dbxref=NCBI_GP:MHV1765111.1;Name=MHV1765111.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020037.7;locus_tag=AC3ASX_06995;product=PAS domain-containing protein;protein_id=MHV1765111.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1227003 1227374 . - . ID=gene-AC3ASX_07000;Name=AC3ASX_07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07000 JBYLIA010000001.1 GeneMarkS-2+ CDS 1227003 1227374 . - 0 ID=cds-MHV1765112.1;Parent=gene-AC3ASX_07000;Dbxref=NCBI_GP:MHV1765112.1;Name=MHV1765112.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_07000;product=hypothetical protein;protein_id=MHV1765112.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1227699 1228541 . + . ID=gene-AC3ASX_07005;Name=AC3ASX_07005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07005 JBYLIA010000001.1 Protein Homology CDS 1227699 1228541 . + 0 ID=cds-MHV1765113.1;Parent=gene-AC3ASX_07005;Dbxref=NCBI_GP:MHV1765113.1;Name=MHV1765113.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013166.7;locus_tag=AC3ASX_07005;product=phosphopantetheine-binding protein;protein_id=MHV1765113.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1229599 1229985 . - . ID=gene-AC3ASX_07010;Name=iglH;gbkey=Gene;gene=iglH;gene_biotype=protein_coding;locus_tag=AC3ASX_07010 JBYLIA010000001.1 Protein Homology CDS 1229599 1229985 . - 0 ID=cds-MHV1765114.1;Parent=gene-AC3ASX_07010;Dbxref=NCBI_GP:MHV1765114.1;Name=MHV1765114.1;gbkey=CDS;gene=iglH;inference=COORDINATES: protein motif:HMM:NF041246.1;locus_tag=AC3ASX_07010;product=type VI secretion system baseplate subunit TssF/IglH;protein_id=MHV1765114.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1230033 1230158 . - . ID=gene-AC3ASX_07015;Name=AC3ASX_07015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07015 JBYLIA010000001.1 GeneMarkS-2+ CDS 1230033 1230158 . - 0 ID=cds-MHV1765115.1;Parent=gene-AC3ASX_07015;Dbxref=NCBI_GP:MHV1765115.1;Name=MHV1765115.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_07015;product=hypothetical protein;protein_id=MHV1765115.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1231368 1231625 . - . ID=gene-AC3ASX_07020;Name=AC3ASX_07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07020 JBYLIA010000001.1 GeneMarkS-2+ CDS 1231368 1231625 . - 0 ID=cds-MHV1765116.1;Parent=gene-AC3ASX_07020;Dbxref=NCBI_GP:MHV1765116.1;Name=MHV1765116.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_07020;product=hypothetical protein;protein_id=MHV1765116.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1232166 1232288 . - . ID=gene-AC3ASX_07025;Name=AC3ASX_07025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07025 JBYLIA010000001.1 GeneMarkS-2+ CDS 1232166 1232288 . - 0 ID=cds-MHV1765117.1;Parent=gene-AC3ASX_07025;Dbxref=NCBI_GP:MHV1765117.1;Name=MHV1765117.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_07025;product=hypothetical protein;protein_id=MHV1765117.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1232707 1233036 . - . ID=gene-AC3ASX_07030;Name=AC3ASX_07030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07030 JBYLIA010000001.1 GeneMarkS-2+ CDS 1232707 1233036 . - 0 ID=cds-MHV1765118.1;Parent=gene-AC3ASX_07030;Dbxref=NCBI_GP:MHV1765118.1;Name=MHV1765118.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_07030;product=hypothetical protein;protein_id=MHV1765118.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1233160 1233912 . + . ID=gene-AC3ASX_07035;Name=AC3ASX_07035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07035 JBYLIA010000001.1 Protein Homology CDS 1233160 1233912 . + 0 ID=cds-MHV1765119.1;Parent=gene-AC3ASX_07035;Dbxref=NCBI_GP:MHV1765119.1;Name=MHV1765119.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003024407.1;locus_tag=AC3ASX_07035;product=lysophospholipid acyltransferase family protein;protein_id=MHV1765119.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1233926 1234666 . + . ID=gene-AC3ASX_07040;Name=AC3ASX_07040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07040 JBYLIA010000001.1 Protein Homology CDS 1233926 1234666 . + 0 ID=cds-MHV1765120.1;Parent=gene-AC3ASX_07040;Dbxref=NCBI_GP:MHV1765120.1;Name=MHV1765120.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010032291.1;locus_tag=AC3ASX_07040;product=lysophospholipid acyltransferase family protein;protein_id=MHV1765120.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1234672 1235391 . - . ID=gene-AC3ASX_07045;Name=AC3ASX_07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07045 JBYLIA010000001.1 Protein Homology CDS 1234672 1235391 . - 0 ID=cds-MHV1765121.1;Parent=gene-AC3ASX_07045;Dbxref=NCBI_GP:MHV1765121.1;Name=MHV1765121.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022781.1;locus_tag=AC3ASX_07045;product=endonuclease/exonuclease/phosphatase family protein;protein_id=MHV1765121.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1235507 1236335 . - . ID=gene-AC3ASX_07050;Name=AC3ASX_07050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07050;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1235507 1236335 . - 0 ID=cds-AC3ASX_07050;Parent=gene-AC3ASX_07050;Note=frameshifted%3B internal stop;Ontology_term=GO:0006814,GO:0006885,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014054.1;locus_tag=AC3ASX_07050;product=Na+/H+ antiporter NhaA;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1236454 1237340 . + . ID=gene-AC3ASX_07055;Name=AC3ASX_07055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07055;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1236454 1237340 . + 0 ID=cds-AC3ASX_07055;Parent=gene-AC3ASX_07055;Note=frameshifted%3B internal stop;Ontology_term=GO:0051537;gbkey=CDS;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549096.1;locus_tag=AC3ASX_07055;product=Rieske 2Fe-2S domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1237414 1237919 . + . ID=gene-AC3ASX_07060;Name=AC3ASX_07060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07060;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1237414 1237919 . + 0 ID=cds-AC3ASX_07060;Parent=gene-AC3ASX_07060;Note=frameshifted;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003024334.1;locus_tag=AC3ASX_07060;product=cytochrome b;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1237954 1238920 . + . ID=gene-AC3ASX_07065;Name=AC3ASX_07065;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07065;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1237954 1238920 . + 0 ID=cds-AC3ASX_07065;Parent=gene-AC3ASX_07065;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013923690.1;locus_tag=AC3ASX_07065;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1239281 1239403 . + . ID=gene-AC3ASX_07070;Name=AC3ASX_07070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07070;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1239281 1239403 . + 0 ID=cds-AC3ASX_07070;Parent=gene-AC3ASX_07070;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012787.7;locus_tag=AC3ASX_07070;product=thioredoxin-dependent thiol peroxidase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1239581 1239682 . + . ID=gene-AC3ASX_07075;Name=AC3ASX_07075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07075 JBYLIA010000001.1 Protein Homology CDS 1239581 1239682 . + 0 ID=cds-MHV1765122.1;Parent=gene-AC3ASX_07075;Dbxref=NCBI_GP:MHV1765122.1;Name=MHV1765122.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012911.7;locus_tag=AC3ASX_07075;product=acylphosphatase;protein_id=MHV1765122.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1239848 1240021 . + . ID=gene-AC3ASX_07080;Name=AC3ASX_07080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07080 JBYLIA010000001.1 Protein Homology CDS 1239848 1240021 . + 0 ID=cds-MHV1765123.1;Parent=gene-AC3ASX_07080;Dbxref=NCBI_GP:MHV1765123.1;Name=MHV1765123.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019144.7;locus_tag=AC3ASX_07080;product=hypothetical protein;protein_id=MHV1765123.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1240018 1240086 . + . ID=gene-AC3ASX_07085;Name=AC3ASX_07085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07085 JBYLIA010000001.1 Protein Homology CDS 1240018 1240086 . + 0 ID=cds-MHV1765124.1;Parent=gene-AC3ASX_07085;Dbxref=NCBI_GP:MHV1765124.1;Name=MHV1765124.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019144.7;locus_tag=AC3ASX_07085;product=hypothetical protein;protein_id=MHV1765124.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1240429 1240662 . - . ID=gene-AC3ASX_07090;Name=AC3ASX_07090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07090 JBYLIA010000001.1 Protein Homology CDS 1240429 1240662 . - 0 ID=cds-MHV1765125.1;Parent=gene-AC3ASX_07090;Dbxref=NCBI_GP:MHV1765125.1;Name=MHV1765125.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014841.7;locus_tag=AC3ASX_07090;product=hypothetical protein;protein_id=MHV1765125.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1240604 1240729 . + . ID=gene-AC3ASX_07095;Name=AC3ASX_07095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07095 JBYLIA010000001.1 GeneMarkS-2+ CDS 1240604 1240729 . + 0 ID=cds-MHV1765126.1;Parent=gene-AC3ASX_07095;Dbxref=NCBI_GP:MHV1765126.1;Name=MHV1765126.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_07095;product=hypothetical protein;protein_id=MHV1765126.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1240844 1241410 . - . ID=gene-AC3ASX_07100;Name=AC3ASX_07100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07100 JBYLIA010000001.1 Protein Homology CDS 1240844 1241410 . - 0 ID=cds-MHV1765127.1;Parent=gene-AC3ASX_07100;Dbxref=NCBI_GP:MHV1765127.1;Name=MHV1765127.1;Ontology_term=GO:0051287;gbkey=CDS;go_function=NAD binding|0051287||IEA;inference=COORDINATES: protein motif:HMM:NF012607.7;locus_tag=AC3ASX_07100;product=NAD(P)-dependent oxidoreductase;protein_id=MHV1765127.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1241969 1243627 . - . ID=gene-AC3ASX_07105;Name=ettA;gbkey=Gene;gene=ettA;gene_biotype=pseudogene;locus_tag=AC3ASX_07105;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1241969 1243627 . - 0 ID=cds-AC3ASX_07105;Parent=gene-AC3ASX_07105;Note=internal stop;Ontology_term=GO:0045900,GO:0005524;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011370826.1;locus_tag=AC3ASX_07105;product=energy-dependent translational throttle protein EttA;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1244031 1244227 . - . ID=gene-AC3ASX_07110;Name=AC3ASX_07110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07110;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1244031 1244227 . - 0 ID=cds-AC3ASX_07110;Parent=gene-AC3ASX_07110;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037958.1;locus_tag=AC3ASX_07110;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1244427 1244864 . + . ID=gene-AC3ASX_07115;Name=AC3ASX_07115;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07115;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1244427 1244864 . + 0 ID=cds-AC3ASX_07115;Parent=gene-AC3ASX_07115;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003027616.1;locus_tag=AC3ASX_07115;product=MBL fold metallo-hydrolase;pseudo=true;transl_table=11 JBYLIA010000001.1 Genbank gene 1245243 1245446 . - . ID=gene-AC3ASX_07120;Name=AC3ASX_07120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07120 JBYLIA010000001.1 GeneMarkS-2+ CDS 1245243 1245446 . - 0 ID=cds-MHV1765128.1;Parent=gene-AC3ASX_07120;Dbxref=NCBI_GP:MHV1765128.1;Name=MHV1765128.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_07120;product=hypothetical protein;protein_id=MHV1765128.1;transl_table=11 JBYLIA010000001.1 Genbank gene 1245470 1245799 . - . ID=gene-AC3ASX_07125;Name=AC3ASX_07125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07125 JBYLIA010000001.1 GeneMarkS-2+ CDS 1245470 1245799 . - 0 ID=cds-MHV1765129.1;Parent=gene-AC3ASX_07125;Dbxref=NCBI_GP:MHV1765129.1;Name=MHV1765129.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_07125;product=hypothetical protein;protein_id=MHV1765129.1;transl_table=11 JBYLIA010000001.1 Genbank pseudogene 1246050 1246308 . - . ID=gene-AC3ASX_07130;Name=AC3ASX_07130;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07130;pseudo=true JBYLIA010000001.1 Protein Homology CDS 1246050 1246308 . - 2 ID=cds-AC3ASX_07130;Parent=gene-AC3ASX_07130;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011648800.1;locus_tag=AC3ASX_07130;product=aminopeptidase N C-terminal domain-containing protein;pseudo=true;transl_table=11 ##sequence-region JBYLIA010000002.1 1 435813 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=3712069 JBYLIA010000002.1 Genbank region 1 435813 . + . ID=JBYLIA010000002.1:1..435813;Dbxref=taxon:3712069;collection-date=2022-04-09;country=Morocco: Oued Chbika;environmental-sample=true;gbkey=Src;isolate=PM03H;isolation-source=Testudo graeca;lat-lon=28.44088381 N 11.36657734 W;metagenome-source=tick metagenome;metagenomic=true;mol_type=genomic DNA;nat-host=Hyalomma aegyptium JBYLIA010000002.1 Genbank gene 425 547 . - . ID=gene-AC3ASX_07135;Name=AC3ASX_07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07135 JBYLIA010000002.1 GeneMarkS-2+ CDS 425 547 . - 0 ID=cds-MHV1765130.1;Parent=gene-AC3ASX_07135;Dbxref=NCBI_GP:MHV1765130.1;Name=MHV1765130.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_07135;product=hypothetical protein;protein_id=MHV1765130.1;transl_table=11 JBYLIA010000002.1 Genbank gene 859 2160 . + . ID=gene-AC3ASX_07140;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=AC3ASX_07140 JBYLIA010000002.1 Protein Homology CDS 859 2160 . + 0 ID=cds-MHV1765131.1;Parent=gene-AC3ASX_07140;Dbxref=NCBI_GP:MHV1765131.1;Name=MHV1765131.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022846.1;locus_tag=AC3ASX_07140;product=adenylosuccinate lyase;protein_id=MHV1765131.1;transl_table=11 JBYLIA010000002.1 Genbank gene 2554 2865 . + . ID=gene-AC3ASX_07145;Name=AC3ASX_07145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07145 JBYLIA010000002.1 GeneMarkS-2+ CDS 2554 2865 . + 0 ID=cds-MHV1765132.1;Parent=gene-AC3ASX_07145;Dbxref=NCBI_GP:MHV1765132.1;Name=MHV1765132.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_07145;product=hypothetical protein;protein_id=MHV1765132.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 2912 4392 . + . ID=gene-AC3ASX_07150;Name=AC3ASX_07150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07150;pseudo=true JBYLIA010000002.1 Protein Homology CDS 2912 4392 . + 0 ID=cds-AC3ASX_07150;Parent=gene-AC3ASX_07150;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0005524,GO:0016887,GO:0140657;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATP-dependent activity|0140657||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549035.1;locus_tag=AC3ASX_07150;product=ATP-binding cassette domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 4406 5475 . + . ID=gene-AC3ASX_07155;Name=AC3ASX_07155;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07155;pseudo=true JBYLIA010000002.1 Protein Homology CDS 4406 5475 . + 0 ID=cds-AC3ASX_07155;Parent=gene-AC3ASX_07155;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003028585.1;locus_tag=AC3ASX_07155;product=HlyD family secretion protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 5559 5846 . + . ID=gene-AC3ASX_07160;Name=gatC;gbkey=Gene;gene=gatC;gene_biotype=protein_coding;locus_tag=AC3ASX_07160 JBYLIA010000002.1 Protein Homology CDS 5559 5846 . + 0 ID=cds-MHV1765133.1;Parent=gene-AC3ASX_07160;Dbxref=NCBI_GP:MHV1765133.1;Name=MHV1765133.1;Ontology_term=GO:0006424,GO:0006450,GO:0050567,GO:0030956;gbkey=CDS;gene=gatC;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA,regulation of translational fidelity|0006450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714582.1;locus_tag=AC3ASX_07160;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC;protein_id=MHV1765133.1;transl_table=11 JBYLIA010000002.1 Genbank gene 5859 7304 . + . ID=gene-AC3ASX_07165;Name=gatA;gbkey=Gene;gene=gatA;gene_biotype=protein_coding;locus_tag=AC3ASX_07165 JBYLIA010000002.1 Protein Homology CDS 5859 7304 . + 0 ID=cds-MHV1765134.1;Parent=gene-AC3ASX_07165;Dbxref=NCBI_GP:MHV1765134.1;Name=MHV1765134.1;Ontology_term=GO:0006412,GO:0006424,GO:0050567,GO:0030956;gbkey=CDS;gene=gatA;go_component=glutamyl-tRNA(Gln) amidotransferase complex|0030956||IEA;go_function=glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity|0050567||IEA;go_process=translation|0006412||IEA,glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018275.1;locus_tag=AC3ASX_07165;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA;protein_id=MHV1765134.1;transl_table=11 JBYLIA010000002.1 Genbank gene 7307 8752 . + . ID=gene-AC3ASX_07170;Name=gatB;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=AC3ASX_07170 JBYLIA010000002.1 Protein Homology CDS 7307 8752 . + 0 ID=cds-MHV1765135.1;Parent=gene-AC3ASX_07170;Dbxref=NCBI_GP:MHV1765135.1;Name=MHV1765135.1;Ontology_term=GO:0016884;gbkey=CDS;gene=gatB;go_function=carbon-nitrogen ligase activity%2C with glutamine as amido-N-donor|0016884||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017411.1;locus_tag=AC3ASX_07170;product=Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB;protein_id=MHV1765135.1;transl_table=11 JBYLIA010000002.1 Genbank gene 8739 9146 . + . ID=gene-AC3ASX_07175;Name=AC3ASX_07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07175 JBYLIA010000002.1 Protein Homology CDS 8739 9146 . + 0 ID=cds-MHV1765136.1;Parent=gene-AC3ASX_07175;Dbxref=NCBI_GP:MHV1765136.1;Name=MHV1765136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017410.1;locus_tag=AC3ASX_07175;product=hypothetical protein;protein_id=MHV1765136.1;transl_table=11 JBYLIA010000002.1 Genbank gene 9166 9843 . - . ID=gene-AC3ASX_07180;Name=AC3ASX_07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07180 JBYLIA010000002.1 Protein Homology CDS 9166 9843 . - 0 ID=cds-MHV1765137.1;Parent=gene-AC3ASX_07180;Dbxref=NCBI_GP:MHV1765137.1;Name=MHV1765137.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022871.1;locus_tag=AC3ASX_07180;product=hypothetical protein;protein_id=MHV1765137.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 9921 11042 . - . ID=gene-AC3ASX_07185;Name=fslD;gbkey=Gene;gene=fslD;gene_biotype=pseudogene;locus_tag=AC3ASX_07185;pseudo=true JBYLIA010000002.1 Protein Homology CDS 9921 11042 . - 0 ID=cds-AC3ASX_07185;Parent=gene-AC3ASX_07185;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=fslD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339006.1;locus_tag=AC3ASX_07185;product=rhizoferrin import MFS transporter FslD;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 11057 12283 . - . ID=gene-AC3ASX_07190;Name=fslC;gbkey=Gene;gene=fslC;gene_biotype=pseudogene;locus_tag=AC3ASX_07190;pseudo=true JBYLIA010000002.1 Protein Homology CDS 11057 12283 . - 0 ID=cds-AC3ASX_07190;Parent=gene-AC3ASX_07190;Note=frameshifted%3B internal stop;Ontology_term=GO:0019290;gbkey=CDS;gene=fslC;go_process=siderophore biosynthetic process|0019290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003024549.1;locus_tag=AC3ASX_07190;product=rhizoferrin biosystnesis N-citrylornithine decarboxylase FslC;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 12280 13513 . - . ID=gene-AC3ASX_07195;Name=fslB;gbkey=Gene;gene=fslB;gene_biotype=pseudogene;locus_tag=AC3ASX_07195;pseudo=true JBYLIA010000002.1 Protein Homology CDS 12280 13513 . - 0 ID=cds-AC3ASX_07195;Parent=gene-AC3ASX_07195;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=fslB;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017400.1;locus_tag=AC3ASX_07195;product=rhizoferrin export MFS transporter FslB;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 13518 15227 . - . ID=gene-AC3ASX_07200;Name=AC3ASX_07200;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07200;pseudo=true JBYLIA010000002.1 Protein Homology CDS 13518 15227 . - 0 ID=cds-AC3ASX_07200;Parent=gene-AC3ASX_07200;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031183.1;locus_tag=AC3ASX_07200;product=IucA/IucC family siderophore biosynthesis protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 15454 15895 . - . ID=gene-AC3ASX_07205;Name=AC3ASX_07205;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07205;pseudo=true JBYLIA010000002.1 Protein Homology CDS 15454 15895 . - 0 ID=cds-AC3ASX_07205;Parent=gene-AC3ASX_07205;Note=frameshifted;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017396.1;locus_tag=AC3ASX_07205;product=Fur family transcriptional regulator;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 16112 16510 . + . ID=gene-AC3ASX_07210;Name=ndhC;gbkey=Gene;gene=ndhC;gene_biotype=protein_coding;locus_tag=AC3ASX_07210 JBYLIA010000002.1 Protein Homology CDS 16112 16510 . + 0 ID=cds-MHV1765138.1;Parent=gene-AC3ASX_07210;Dbxref=NCBI_GP:MHV1765138.1;Name=MHV1765138.1;Ontology_term=GO:0008137;gbkey=CDS;gene=ndhC;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022891.1;locus_tag=AC3ASX_07210;product=NADH-quinone oxidoreductase subunit A;protein_id=MHV1765138.1;transl_table=11 JBYLIA010000002.1 Genbank gene 16501 16977 . + . ID=gene-AC3ASX_07215;Name=AC3ASX_07215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07215 JBYLIA010000002.1 Protein Homology CDS 16501 16977 . + 0 ID=cds-MHV1765139.1;Parent=gene-AC3ASX_07215;Dbxref=NCBI_GP:MHV1765139.1;Name=MHV1765139.1;Ontology_term=GO:0008137,GO:0016655,GO:0048038,GO:0051539,GO:0005886,GO:0045271;gbkey=CDS;go_component=plasma membrane|0005886||IEA,respiratory chain complex I|0045271||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017394.1;locus_tag=AC3ASX_07215;product=NuoB/complex I 20 kDa subunit family protein;protein_id=MHV1765139.1;transl_table=11 JBYLIA010000002.1 Genbank gene 16980 17624 . + . ID=gene-AC3ASX_07220;Name=AC3ASX_07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07220 JBYLIA010000002.1 Protein Homology CDS 16980 17624 . + 0 ID=cds-MHV1765140.1;Parent=gene-AC3ASX_07220;Dbxref=NCBI_GP:MHV1765140.1;Name=MHV1765140.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003041313.1;locus_tag=AC3ASX_07220;product=NADH-quinone oxidoreductase subunit C;protein_id=MHV1765140.1;transl_table=11 JBYLIA010000002.1 Genbank gene 17649 18902 . + . ID=gene-AC3ASX_07225;Name=AC3ASX_07225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07225 JBYLIA010000002.1 Protein Homology CDS 17649 18902 . + 0 ID=cds-MHV1765141.1;Parent=gene-AC3ASX_07225;Dbxref=NCBI_GP:MHV1765141.1;Name=MHV1765141.1;Ontology_term=GO:0016651,GO:0048038,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,quinone binding|0048038||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549020.1;locus_tag=AC3ASX_07225;product=NADH-quinone oxidoreductase subunit D;protein_id=MHV1765141.1;transl_table=11 JBYLIA010000002.1 Genbank gene 18912 19400 . + . ID=gene-AC3ASX_07230;Name=AC3ASX_07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07230 JBYLIA010000002.1 Protein Homology CDS 18912 19400 . + 0 ID=cds-MHV1765142.1;Parent=gene-AC3ASX_07230;Dbxref=NCBI_GP:MHV1765142.1;Name=MHV1765142.1;Ontology_term=GO:0016491,GO:0046872,GO:0051537;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549019.1;locus_tag=AC3ASX_07230;product=NADH-quinone oxidoreductase subunit NuoE family protein;protein_id=MHV1765142.1;transl_table=11 JBYLIA010000002.1 Genbank gene 19404 20678 . + . ID=gene-AC3ASX_07235;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=AC3ASX_07235 JBYLIA010000002.1 Protein Homology CDS 19404 20678 . + 0 ID=cds-MHV1765143.1;Parent=gene-AC3ASX_07235;Dbxref=NCBI_GP:MHV1765143.1;Name=MHV1765143.1;Ontology_term=GO:0010181,GO:0050136,GO:0051287,GO:0051539;gbkey=CDS;gene=nuoF;go_function=FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714596.1;locus_tag=AC3ASX_07235;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=MHV1765143.1;transl_table=11 JBYLIA010000002.1 Genbank gene 20696 23053 . + . ID=gene-AC3ASX_07240;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=AC3ASX_07240 JBYLIA010000002.1 Protein Homology CDS 20696 23053 . + 0 ID=cds-MHV1765144.1;Parent=gene-AC3ASX_07240;Dbxref=NCBI_GP:MHV1765144.1;Name=MHV1765144.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035184.1;locus_tag=AC3ASX_07240;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=MHV1765144.1;transl_table=11 JBYLIA010000002.1 Genbank gene 23069 24067 . + . ID=gene-AC3ASX_07245;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=AC3ASX_07245 JBYLIA010000002.1 Protein Homology CDS 23069 24067 . + 0 ID=cds-MHV1765145.1;Parent=gene-AC3ASX_07245;Dbxref=NCBI_GP:MHV1765145.1;Name=MHV1765145.1;Ontology_term=GO:0016020;gbkey=CDS;gene=nuoH;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429074.1;locus_tag=AC3ASX_07245;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=MHV1765145.1;transl_table=11 JBYLIA010000002.1 Genbank gene 24093 24581 . + . ID=gene-AC3ASX_07250;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=AC3ASX_07250 JBYLIA010000002.1 Protein Homology CDS 24093 24581 . + 0 ID=cds-MHV1765146.1;Parent=gene-AC3ASX_07250;Dbxref=NCBI_GP:MHV1765146.1;Name=MHV1765146.1;Ontology_term=GO:0016651,GO:0051539;gbkey=CDS;gene=nuoI;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286959.1;locus_tag=AC3ASX_07250;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=MHV1765146.1;transl_table=11 JBYLIA010000002.1 Genbank gene 24586 25191 . + . ID=gene-AC3ASX_07255;Name=AC3ASX_07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07255 JBYLIA010000002.1 Protein Homology CDS 24586 25191 . + 0 ID=cds-MHV1765147.1;Parent=gene-AC3ASX_07255;Dbxref=NCBI_GP:MHV1765147.1;Name=MHV1765147.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035180.1;locus_tag=AC3ASX_07255;product=NADH-quinone oxidoreductase subunit J;protein_id=MHV1765147.1;transl_table=11 JBYLIA010000002.1 Genbank gene 25184 25501 . + . ID=gene-AC3ASX_07260;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=AC3ASX_07260 JBYLIA010000002.1 Protein Homology CDS 25184 25501 . + 0 ID=cds-MHV1765148.1;Parent=gene-AC3ASX_07260;Dbxref=NCBI_GP:MHV1765148.1;Name=MHV1765148.1;gbkey=CDS;gene=nuoK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714600.1;locus_tag=AC3ASX_07260;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=MHV1765148.1;transl_table=11 JBYLIA010000002.1 Genbank gene 25511 27520 . + . ID=gene-AC3ASX_07265;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=AC3ASX_07265 JBYLIA010000002.1 Protein Homology CDS 25511 27520 . + 0 ID=cds-MHV1765149.1;Parent=gene-AC3ASX_07265;Dbxref=NCBI_GP:MHV1765149.1;Name=MHV1765149.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429075.1;locus_tag=AC3ASX_07265;product=NADH-quinone oxidoreductase subunit L;protein_id=MHV1765149.1;transl_table=11 JBYLIA010000002.1 Genbank gene 27546 29135 . + . ID=gene-AC3ASX_07270;Name=AC3ASX_07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07270 JBYLIA010000002.1 Protein Homology CDS 27546 29135 . + 0 ID=cds-MHV1765150.1;Parent=gene-AC3ASX_07270;Dbxref=NCBI_GP:MHV1765150.1;Name=MHV1765150.1;Ontology_term=GO:0015990,GO:0042773,GO:0008137,GO:0048039,GO:0045271;gbkey=CDS;go_component=respiratory chain complex I|0045271||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,ubiquinone binding|0048039||IEA;go_process=electron transport coupled proton transport|0015990||IEA,ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714602.1;locus_tag=AC3ASX_07270;product=complex I subunit 4 family protein;protein_id=MHV1765150.1;transl_table=11 JBYLIA010000002.1 Genbank gene 29151 30602 . + . ID=gene-AC3ASX_07275;Name=AC3ASX_07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07275 JBYLIA010000002.1 Protein Homology CDS 29151 30602 . + 0 ID=cds-MHV1765151.1;Parent=gene-AC3ASX_07275;Dbxref=NCBI_GP:MHV1765151.1;Name=MHV1765151.1;Ontology_term=GO:0008137,GO:0016655,GO:0048038,GO:0050136,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003024577.1;locus_tag=AC3ASX_07275;product=NADH-quinone oxidoreductase subunit N;protein_id=MHV1765151.1;transl_table=11 JBYLIA010000002.1 Genbank gene 30681 30875 . + . ID=gene-AC3ASX_07280;Name=AC3ASX_07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07280 JBYLIA010000002.1 Protein Homology CDS 30681 30875 . + 0 ID=cds-MHV1765152.1;Parent=gene-AC3ASX_07280;Dbxref=NCBI_GP:MHV1765152.1;Name=MHV1765152.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018307.1;locus_tag=AC3ASX_07280;product=accessory factor UbiK family protein;protein_id=MHV1765152.1;transl_table=11 JBYLIA010000002.1 Genbank gene 31259 31573 . + . ID=gene-AC3ASX_07285;Name=AC3ASX_07285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07285 JBYLIA010000002.1 Protein Homology CDS 31259 31573 . + 0 ID=cds-MHV1765153.1;Parent=gene-AC3ASX_07285;Dbxref=NCBI_GP:MHV1765153.1;Name=MHV1765153.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF013260.7;locus_tag=AC3ASX_07285;product=ATP-binding protein;protein_id=MHV1765153.1;transl_table=11 JBYLIA010000002.1 Genbank gene 31626 31790 . + . ID=gene-AC3ASX_07290;Name=AC3ASX_07290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07290 JBYLIA010000002.1 Protein Homology CDS 31626 31790 . + 0 ID=cds-MHV1765154.1;Parent=gene-AC3ASX_07290;Dbxref=NCBI_GP:MHV1765154.1;Name=MHV1765154.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013260.7;locus_tag=AC3ASX_07290;product=hypothetical protein;protein_id=MHV1765154.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 31745 32158 . + . ID=gene-AC3ASX_07295;Name=AC3ASX_07295;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07295;pseudo=true JBYLIA010000002.1 Protein Homology CDS 31745 32158 . + 0 ID=cds-AC3ASX_07295;Parent=gene-AC3ASX_07295;Note=internal stop;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: protein motif:HMM:NF013260.7;locus_tag=AC3ASX_07295;product=ATP-binding protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 32174 32395 . + . ID=gene-AC3ASX_07300;Name=AC3ASX_07300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07300 JBYLIA010000002.1 Protein Homology CDS 32174 32395 . + 0 ID=cds-MHV1765155.1;Parent=gene-AC3ASX_07300;Dbxref=NCBI_GP:MHV1765155.1;Name=MHV1765155.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024731.7;locus_tag=AC3ASX_07300;product=magnesium chelatase subunit ChlI family protein;protein_id=MHV1765155.1;transl_table=11 JBYLIA010000002.1 Genbank gene 32449 33489 . + . ID=gene-AC3ASX_07305;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=AC3ASX_07305 JBYLIA010000002.1 Protein Homology CDS 32449 33489 . + 0 ID=cds-MHV1765156.1;Parent=gene-AC3ASX_07305;Dbxref=NCBI_GP:MHV1765156.1;Name=MHV1765156.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286967.1;locus_tag=AC3ASX_07305;product=uroporphyrinogen decarboxylase;protein_id=MHV1765156.1;transl_table=11 JBYLIA010000002.1 Genbank gene 33555 33631 . + . ID=gene-AC3ASX_07310;Name=AC3ASX_07310;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_07310 JBYLIA010000002.1 tRNAscan-SE tRNA 33555 33631 . + . ID=rna-AC3ASX_07310;Parent=gene-AC3ASX_07310;anticodon=(pos:33589..33591);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_07310;product=tRNA-Met JBYLIA010000002.1 tRNAscan-SE exon 33555 33631 . + . ID=exon-AC3ASX_07310-1;Parent=rna-AC3ASX_07310;anticodon=(pos:33589..33591);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_07310;product=tRNA-Met JBYLIA010000002.1 Genbank pseudogene 33709 34162 . + . ID=gene-AC3ASX_07315;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=pseudogene;locus_tag=AC3ASX_07315;pseudo=true JBYLIA010000002.1 Protein Homology CDS 33709 34162 . + 0 ID=cds-AC3ASX_07315;Parent=gene-AC3ASX_07315;Note=frameshifted%3B internal stop;gbkey=CDS;gene=rimP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280354.1;locus_tag=AC3ASX_07315;product=ribosome maturation factor RimP;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 34180 35649 . + . ID=gene-AC3ASX_07320;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=AC3ASX_07320 JBYLIA010000002.1 Protein Homology CDS 34180 35649 . + 0 ID=cds-MHV1765157.1;Parent=gene-AC3ASX_07320;Dbxref=NCBI_GP:MHV1765157.1;Name=MHV1765157.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714607.1;locus_tag=AC3ASX_07320;product=transcription termination factor NusA;protein_id=MHV1765157.1;transl_table=11 JBYLIA010000002.1 Genbank gene 35688 38225 . + . ID=gene-AC3ASX_07325;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=AC3ASX_07325 JBYLIA010000002.1 Protein Homology CDS 35688 38225 . + 0 ID=cds-MHV1765158.1;Parent=gene-AC3ASX_07325;Dbxref=NCBI_GP:MHV1765158.1;Name=MHV1765158.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010032493.1;locus_tag=AC3ASX_07325;product=translation initiation factor IF-2;protein_id=MHV1765158.1;transl_table=11 JBYLIA010000002.1 Genbank gene 38228 38659 . + . ID=gene-AC3ASX_07330;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=AC3ASX_07330 JBYLIA010000002.1 Protein Homology CDS 38228 38659 . + 0 ID=cds-MHV1765159.1;Parent=gene-AC3ASX_07330;Dbxref=NCBI_GP:MHV1765159.1;Name=MHV1765159.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035158.1;locus_tag=AC3ASX_07330;product=30S ribosome-binding factor RbfA;protein_id=MHV1765159.1;transl_table=11 JBYLIA010000002.1 Genbank gene 38667 39935 . + . ID=gene-AC3ASX_07335;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=AC3ASX_07335 JBYLIA010000002.1 Protein Homology CDS 38667 39935 . + 0 ID=cds-MHV1765160.1;Parent=gene-AC3ASX_07335;Dbxref=NCBI_GP:MHV1765160.1;Name=MHV1765160.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014549003.1;locus_tag=AC3ASX_07335;product=histidine--tRNA ligase;protein_id=MHV1765160.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 39942 41240 . + . ID=gene-AC3ASX_07340;Name=AC3ASX_07340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07340;pseudo=true JBYLIA010000002.1 Protein Homology CDS 39942 41240 . + 0 ID=cds-AC3ASX_07340;Parent=gene-AC3ASX_07340;Note=internal stop;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035155.1;locus_tag=AC3ASX_07340;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 41243 42309 . + . ID=gene-AC3ASX_07345;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=pseudogene;locus_tag=AC3ASX_07345;pseudo=true JBYLIA010000002.1 Protein Homology CDS 41243 42309 . + 0 ID=cds-AC3ASX_07345;Parent=gene-AC3ASX_07345;Note=frameshifted;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037719.1;locus_tag=AC3ASX_07345;product=cell division protein ZapE;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 42302 43231 . + . ID=gene-AC3ASX_07350;Name=AC3ASX_07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07350 JBYLIA010000002.1 Protein Homology CDS 42302 43231 . + 0 ID=cds-MHV1765161.1;Parent=gene-AC3ASX_07350;Dbxref=NCBI_GP:MHV1765161.1;Name=MHV1765161.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017349.1;locus_tag=AC3ASX_07350;product=RluA family pseudouridine synthase;protein_id=MHV1765161.1;transl_table=11 JBYLIA010000002.1 Genbank gene 43234 44538 . - . ID=gene-AC3ASX_07355;Name=AC3ASX_07355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07355 JBYLIA010000002.1 Protein Homology CDS 43234 44538 . - 0 ID=cds-MHV1765162.1;Parent=gene-AC3ASX_07355;Dbxref=NCBI_GP:MHV1765162.1;Name=MHV1765162.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017348.1;locus_tag=AC3ASX_07355;product=MFS transporter;protein_id=MHV1765162.1;transl_table=11 JBYLIA010000002.1 Genbank gene 44692 45063 . + . ID=gene-AC3ASX_07360;Name=AC3ASX_07360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07360 JBYLIA010000002.1 Protein Homology CDS 44692 45063 . + 0 ID=cds-MHV1765163.1;Parent=gene-AC3ASX_07360;Dbxref=NCBI_GP:MHV1765163.1;Name=MHV1765163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548996.1;locus_tag=AC3ASX_07360;product=ATP synthase subunit I;protein_id=MHV1765163.1;transl_table=11 JBYLIA010000002.1 Genbank gene 45116 45907 . + . ID=gene-AC3ASX_07365;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=AC3ASX_07365 JBYLIA010000002.1 Protein Homology CDS 45116 45907 . + 0 ID=cds-MHV1765164.1;Parent=gene-AC3ASX_07365;Dbxref=NCBI_GP:MHV1765164.1;Name=MHV1765164.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286978.1;locus_tag=AC3ASX_07365;product=F0F1 ATP synthase subunit A;protein_id=MHV1765164.1;transl_table=11 JBYLIA010000002.1 Genbank gene 45959 46264 . + . ID=gene-AC3ASX_07370;Name=AC3ASX_07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07370 JBYLIA010000002.1 Protein Homology CDS 45959 46264 . + 0 ID=cds-MHV1765165.1;Parent=gene-AC3ASX_07370;Dbxref=NCBI_GP:MHV1765165.1;Name=MHV1765165.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714617.1;locus_tag=AC3ASX_07370;product=F0F1 ATP synthase subunit B;protein_id=MHV1765165.1;transl_table=11 JBYLIA010000002.1 Genbank gene 46309 46779 . + . ID=gene-AC3ASX_07375;Name=AC3ASX_07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07375 JBYLIA010000002.1 Protein Homology CDS 46309 46779 . + 0 ID=cds-MHV1765166.1;Parent=gene-AC3ASX_07375;Dbxref=NCBI_GP:MHV1765166.1;Name=MHV1765166.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003024602.1;locus_tag=AC3ASX_07375;product=F0F1 ATP synthase subunit B;protein_id=MHV1765166.1;transl_table=11 JBYLIA010000002.1 Genbank gene 46799 47329 . + . ID=gene-AC3ASX_07380;Name=AC3ASX_07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07380 JBYLIA010000002.1 Protein Homology CDS 46799 47329 . + 0 ID=cds-MHV1765167.1;Parent=gene-AC3ASX_07380;Dbxref=NCBI_GP:MHV1765167.1;Name=MHV1765167.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280365.1;locus_tag=AC3ASX_07380;product=F0F1 ATP synthase subunit delta;protein_id=MHV1765167.1;transl_table=11 JBYLIA010000002.1 Genbank gene 47341 48882 . + . ID=gene-AC3ASX_07385;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=AC3ASX_07385 JBYLIA010000002.1 Protein Homology CDS 47341 48882 . + 0 ID=cds-MHV1765168.1;Parent=gene-AC3ASX_07385;Dbxref=NCBI_GP:MHV1765168.1;Name=MHV1765168.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280366.1;locus_tag=AC3ASX_07385;product=F0F1 ATP synthase subunit alpha;protein_id=MHV1765168.1;transl_table=11 JBYLIA010000002.1 Genbank gene 48897 49793 . + . ID=gene-AC3ASX_07390;Name=AC3ASX_07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07390 JBYLIA010000002.1 Protein Homology CDS 48897 49793 . + 0 ID=cds-MHV1765169.1;Parent=gene-AC3ASX_07390;Dbxref=NCBI_GP:MHV1765169.1;Name=MHV1765169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019765.1;locus_tag=AC3ASX_07390;product=F0F1 ATP synthase subunit gamma;protein_id=MHV1765169.1;transl_table=11 JBYLIA010000002.1 Genbank gene 49803 51179 . + . ID=gene-AC3ASX_07395;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=AC3ASX_07395 JBYLIA010000002.1 Protein Homology CDS 49803 51179 . + 0 ID=cds-MHV1765170.1;Parent=gene-AC3ASX_07395;Dbxref=NCBI_GP:MHV1765170.1;Name=MHV1765170.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714621.1;locus_tag=AC3ASX_07395;product=F0F1 ATP synthase subunit beta;protein_id=MHV1765170.1;transl_table=11 JBYLIA010000002.1 Genbank gene 51192 51629 . + . ID=gene-AC3ASX_07400;Name=AC3ASX_07400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07400 JBYLIA010000002.1 Protein Homology CDS 51192 51629 . + 0 ID=cds-MHV1765171.1;Parent=gene-AC3ASX_07400;Dbxref=NCBI_GP:MHV1765171.1;Name=MHV1765171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004286985.1;locus_tag=AC3ASX_07400;product=F0F1 ATP synthase subunit epsilon;protein_id=MHV1765171.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 51859 54657 . + . ID=gene-AC3ASX_07405;Name=AC3ASX_07405;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07405;pseudo=true JBYLIA010000002.1 Protein Homology CDS 51859 54657 . + 0 ID=cds-AC3ASX_07405;Parent=gene-AC3ASX_07405;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922336.1;locus_tag=AC3ASX_07405;product=glycoside hydrolase family 18 protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 54678 55007 . - . ID=gene-AC3ASX_07410;Name=grxD;gbkey=Gene;gene=grxD;gene_biotype=protein_coding;locus_tag=AC3ASX_07410 JBYLIA010000002.1 Protein Homology CDS 54678 55007 . - 0 ID=cds-MHV1765172.1;Parent=gene-AC3ASX_07410;Dbxref=NCBI_GP:MHV1765172.1;Name=MHV1765172.1;Ontology_term=GO:0009055;gbkey=CDS;gene=grxD;go_function=electron transfer activity|0009055||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548982.1;locus_tag=AC3ASX_07410;product=Grx4 family monothiol glutaredoxin;protein_id=MHV1765172.1;transl_table=11 JBYLIA010000002.1 Genbank gene 55145 55723 . + . ID=gene-AC3ASX_07415;Name=AC3ASX_07415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07415 JBYLIA010000002.1 Protein Homology CDS 55145 55723 . + 0 ID=cds-MHV1765173.1;Parent=gene-AC3ASX_07415;Dbxref=NCBI_GP:MHV1765173.1;Name=MHV1765173.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017326.1;locus_tag=AC3ASX_07415;product=superoxide dismutase;protein_id=MHV1765173.1;transl_table=11 JBYLIA010000002.1 Genbank gene 55940 57205 . - . ID=gene-AC3ASX_07420;Name=AC3ASX_07420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07420 JBYLIA010000002.1 Protein Homology CDS 55940 57205 . - 0 ID=cds-MHV1765174.1;Parent=gene-AC3ASX_07420;Dbxref=NCBI_GP:MHV1765174.1;Name=MHV1765174.1;Ontology_term=GO:0006810,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548979.1;locus_tag=AC3ASX_07420;product=AmpG family muropeptide MFS transporter;protein_id=MHV1765174.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 57293 58550 . - . ID=gene-AC3ASX_07425;Name=AC3ASX_07425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07425;pseudo=true JBYLIA010000002.1 Protein Homology CDS 57293 58550 . - 0 ID=cds-AC3ASX_07425;Parent=gene-AC3ASX_07425;Note=frameshifted%3B internal stop;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003024620.1;locus_tag=AC3ASX_07425;product=citrate synthase;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 58827 59300 . + . ID=gene-AC3ASX_07430;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;locus_tag=AC3ASX_07430 JBYLIA010000002.1 Protein Homology CDS 58827 59300 . + 0 ID=cds-MHV1765175.1;Parent=gene-AC3ASX_07430;Dbxref=NCBI_GP:MHV1765175.1;Name=MHV1765175.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0045273;gbkey=CDS;gene=sdhC;go_component=respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019781.1;locus_tag=AC3ASX_07430;product=succinate dehydrogenase%2C cytochrome b556 subunit;protein_id=MHV1765175.1;transl_table=11 JBYLIA010000002.1 Genbank gene 59276 59644 . + . ID=gene-AC3ASX_07435;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=AC3ASX_07435 JBYLIA010000002.1 Protein Homology CDS 59276 59644 . + 0 ID=cds-MHV1765176.1;Parent=gene-AC3ASX_07435;Dbxref=NCBI_GP:MHV1765176.1;Name=MHV1765176.1;Ontology_term=GO:0006099,GO:0000104,GO:0020037,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhD;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,heme binding|0020037||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017321.1;locus_tag=AC3ASX_07435;product=succinate dehydrogenase%2C hydrophobic membrane anchor protein;protein_id=MHV1765176.1;transl_table=11 JBYLIA010000002.1 Genbank gene 59657 61450 . + . ID=gene-AC3ASX_07440;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=AC3ASX_07440 JBYLIA010000002.1 Protein Homology CDS 59657 61450 . + 0 ID=cds-MHV1765177.1;Parent=gene-AC3ASX_07440;Dbxref=NCBI_GP:MHV1765177.1;Name=MHV1765177.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010031426.1;locus_tag=AC3ASX_07440;product=succinate dehydrogenase flavoprotein subunit;protein_id=MHV1765177.1;transl_table=11 JBYLIA010000002.1 Genbank gene 61468 62169 . + . ID=gene-AC3ASX_07445;Name=AC3ASX_07445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07445 JBYLIA010000002.1 Protein Homology CDS 61468 62169 . + 0 ID=cds-MHV1765178.1;Parent=gene-AC3ASX_07445;Dbxref=NCBI_GP:MHV1765178.1;Name=MHV1765178.1;Ontology_term=GO:0008177,GO:0046872;gbkey=CDS;go_function=succinate dehydrogenase (quinone) activity|0008177||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429095.1;locus_tag=AC3ASX_07445;product=succinate dehydrogenase iron-sulfur subunit;protein_id=MHV1765178.1;transl_table=11 JBYLIA010000002.1 Genbank gene 62199 65030 . + . ID=gene-AC3ASX_07450;Name=AC3ASX_07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07450 JBYLIA010000002.1 Protein Homology CDS 62199 65030 . + 0 ID=cds-MHV1765179.1;Parent=gene-AC3ASX_07450;Dbxref=NCBI_GP:MHV1765179.1;Name=MHV1765179.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976;gbkey=CDS;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017314.1;locus_tag=AC3ASX_07450;product=2-oxoglutarate dehydrogenase E1 component;protein_id=MHV1765179.1;transl_table=11 JBYLIA010000002.1 Genbank gene 65040 66206 . + . ID=gene-AC3ASX_07455;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=AC3ASX_07455 JBYLIA010000002.1 Protein Homology CDS 65040 66206 . + 0 ID=cds-MHV1765180.1;Parent=gene-AC3ASX_07455;Dbxref=NCBI_GP:MHV1765180.1;Name=MHV1765180.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002691657.1;locus_tag=AC3ASX_07455;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=MHV1765180.1;transl_table=11 JBYLIA010000002.1 Genbank gene 66248 66775 . + . ID=gene-AC3ASX_07460;Name=AC3ASX_07460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07460 JBYLIA010000002.1 Protein Homology CDS 66248 66775 . + 0 ID=cds-MHV1765181.1;Parent=gene-AC3ASX_07460;Dbxref=NCBI_GP:MHV1765181.1;Name=MHV1765181.1;Ontology_term=GO:0009116,GO:0003999;gbkey=CDS;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037686.1;locus_tag=AC3ASX_07460;product=adenine phosphoribosyltransferase;protein_id=MHV1765181.1;transl_table=11 JBYLIA010000002.1 Genbank gene 66786 68117 . + . ID=gene-AC3ASX_07465;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=AC3ASX_07465 JBYLIA010000002.1 Protein Homology CDS 66786 68117 . + 0 ID=cds-MHV1765182.1;Parent=gene-AC3ASX_07465;Dbxref=NCBI_GP:MHV1765182.1;Name=MHV1765182.1;Ontology_term=GO:0005975,GO:0009252,GO:0000287,GO:0008966;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA;go_process=carbohydrate metabolic process|0005975||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037685.1;locus_tag=AC3ASX_07465;product=phosphoglucosamine mutase;protein_id=MHV1765182.1;transl_table=11 JBYLIA010000002.1 Genbank gene 68120 68881 . + . ID=gene-AC3ASX_07470;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=AC3ASX_07470 JBYLIA010000002.1 Protein Homology CDS 68120 68881 . + 0 ID=cds-MHV1765183.1;Parent=gene-AC3ASX_07470;Dbxref=NCBI_GP:MHV1765183.1;Name=MHV1765183.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017307.1;locus_tag=AC3ASX_07470;product=triose-phosphate isomerase;protein_id=MHV1765183.1;transl_table=11 JBYLIA010000002.1 Genbank gene 68869 69222 . + . ID=gene-AC3ASX_07475;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=AC3ASX_07475 JBYLIA010000002.1 Protein Homology CDS 68869 69222 . + 0 ID=cds-MHV1765184.1;Parent=gene-AC3ASX_07475;Dbxref=NCBI_GP:MHV1765184.1;Name=MHV1765184.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019801.1;locus_tag=AC3ASX_07475;product=preprotein translocase subunit SecG;protein_id=MHV1765184.1;transl_table=11 JBYLIA010000002.1 Genbank gene 69231 69316 . + . ID=gene-AC3ASX_07480;Name=AC3ASX_07480;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_07480 JBYLIA010000002.1 tRNAscan-SE tRNA 69231 69316 . + . ID=rna-AC3ASX_07480;Parent=gene-AC3ASX_07480;anticodon=(pos:69265..69267);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_07480;product=tRNA-Leu JBYLIA010000002.1 tRNAscan-SE exon 69231 69316 . + . ID=exon-AC3ASX_07480-1;Parent=rna-AC3ASX_07480;anticodon=(pos:69265..69267);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_07480;product=tRNA-Leu JBYLIA010000002.1 Genbank gene 69392 69592 . + . ID=gene-AC3ASX_07485;Name=AC3ASX_07485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07485 JBYLIA010000002.1 GeneMarkS-2+ CDS 69392 69592 . + 0 ID=cds-MHV1765185.1;Parent=gene-AC3ASX_07485;Dbxref=NCBI_GP:MHV1765185.1;Name=MHV1765185.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_07485;product=helix-turn-helix domain-containing protein;protein_id=MHV1765185.1;transl_table=11 JBYLIA010000002.1 Genbank gene 69711 70004 . + . ID=gene-AC3ASX_07490;Name=AC3ASX_07490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07490 JBYLIA010000002.1 GeneMarkS-2+ CDS 69711 70004 . + 0 ID=cds-MHV1765186.1;Parent=gene-AC3ASX_07490;Dbxref=NCBI_GP:MHV1765186.1;Name=MHV1765186.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_07490;product=hypothetical protein;protein_id=MHV1765186.1;transl_table=11 JBYLIA010000002.1 Genbank gene 69994 70185 . + . ID=gene-AC3ASX_07495;Name=AC3ASX_07495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07495 JBYLIA010000002.1 GeneMarkS-2+ CDS 69994 70185 . + 0 ID=cds-MHV1765187.1;Parent=gene-AC3ASX_07495;Dbxref=NCBI_GP:MHV1765187.1;Name=MHV1765187.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_07495;product=hypothetical protein;protein_id=MHV1765187.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 70413 70863 . + . ID=gene-AC3ASX_07500;Name=AC3ASX_07500;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07500;pseudo=true JBYLIA010000002.1 Protein Homology CDS 70413 70863 . + 0 ID=cds-AC3ASX_07500;Parent=gene-AC3ASX_07500;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548967.1;locus_tag=AC3ASX_07500;product=PepSY domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 70860 72002 . - . ID=gene-AC3ASX_07505;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=pseudogene;locus_tag=AC3ASX_07505;pseudo=true JBYLIA010000002.1 Protein Homology CDS 70860 72002 . - 0 ID=cds-AC3ASX_07505;Parent=gene-AC3ASX_07505;Note=frameshifted%3B internal stop;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429100.1;locus_tag=AC3ASX_07505;product=radical SAM family heme chaperone HemW;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 72004 72381 . - . ID=gene-AC3ASX_07510;Name=AC3ASX_07510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07510 JBYLIA010000002.1 Protein Homology CDS 72004 72381 . - 0 ID=cds-MHV1765188.1;Parent=gene-AC3ASX_07510;Dbxref=NCBI_GP:MHV1765188.1;Name=MHV1765188.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017296.1;locus_tag=AC3ASX_07510;product=GtrA family protein;protein_id=MHV1765188.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 72451 73342 . + . ID=gene-AC3ASX_07515;Name=AC3ASX_07515;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07515;pseudo=true JBYLIA010000002.1 Protein Homology CDS 72451 73342 . + 0 ID=cds-AC3ASX_07515;Parent=gene-AC3ASX_07515;Note=frameshifted;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280391.1;locus_tag=AC3ASX_07515;product=Dyp-type peroxidase;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 73432 76244 . + . ID=gene-AC3ASX_07520;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=pseudogene;locus_tag=AC3ASX_07520;pseudo=true JBYLIA010000002.1 Protein Homology CDS 73432 76244 . + 0 ID=cds-AC3ASX_07520;Parent=gene-AC3ASX_07520;Note=frameshifted%3B internal stop;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035108.1;locus_tag=AC3ASX_07520;product=aconitate hydratase AcnA;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 76337 77369 . + . ID=gene-AC3ASX_07525;Name=AC3ASX_07525;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07525;pseudo=true JBYLIA010000002.1 Protein Homology CDS 76337 77369 . + 0 ID=cds-AC3ASX_07525;Parent=gene-AC3ASX_07525;Note=frameshifted%3B internal stop;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550254.1;locus_tag=AC3ASX_07525;product=type IV pilus twitching motility protein PilT;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 77375 78337 . - . ID=gene-AC3ASX_07530;Name=AC3ASX_07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07530 JBYLIA010000002.1 Protein Homology CDS 77375 78337 . - 0 ID=cds-MHV1765189.1;Parent=gene-AC3ASX_07530;Dbxref=NCBI_GP:MHV1765189.1;Name=MHV1765189.1;Ontology_term=GO:0006119,GO:0009055,GO:0005886,GO:0070069;gbkey=CDS;go_component=plasma membrane|0005886||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=oxidative phosphorylation|0006119||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019640.1;locus_tag=AC3ASX_07530;product=cytochrome d ubiquinol oxidase subunit II;protein_id=MHV1765189.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 78341 79718 . - . ID=gene-AC3ASX_07535;Name=AC3ASX_07535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07535;pseudo=true JBYLIA010000002.1 Protein Homology CDS 78341 79718 . - 0 ID=cds-AC3ASX_07535;Parent=gene-AC3ASX_07535;Note=frameshifted;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339930.1;locus_tag=AC3ASX_07535;product=cytochrome ubiquinol oxidase subunit I;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 79871 80738 . + . ID=gene-AC3ASX_07540;Name=AC3ASX_07540;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07540;pseudo=true JBYLIA010000002.1 Protein Homology CDS 79871 80738 . + 0 ID=cds-AC3ASX_07540;Parent=gene-AC3ASX_07540;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550250.1;locus_tag=AC3ASX_07540;product=DUF1731 domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 80747 82171 . - . ID=gene-AC3ASX_07545;Name=AC3ASX_07545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07545 JBYLIA010000002.1 Protein Homology CDS 80747 82171 . - 0 ID=cds-MHV1765190.1;Parent=gene-AC3ASX_07545;Dbxref=NCBI_GP:MHV1765190.1;Name=MHV1765190.1;Ontology_term=GO:0000160,GO:0007165,GO:0000155,GO:0004673,GO:0005524,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287016.1;locus_tag=AC3ASX_07545;product=sensor histidine kinase;protein_id=MHV1765190.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 82289 83141 . + . ID=gene-AC3ASX_07550;Name=AC3ASX_07550;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07550;pseudo=true JBYLIA010000002.1 Protein Homology CDS 82289 83141 . + 0 ID=cds-AC3ASX_07550;Parent=gene-AC3ASX_07550;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011733725.1;locus_tag=AC3ASX_07550;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 83219 84499 . - . ID=gene-AC3ASX_07555;Name=AC3ASX_07555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07555 JBYLIA010000002.1 Protein Homology CDS 83219 84499 . - 0 ID=cds-MHV1765191.1;Parent=gene-AC3ASX_07555;Dbxref=NCBI_GP:MHV1765191.1;Name=MHV1765191.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017116.1;locus_tag=AC3ASX_07555;product=MFS transporter;protein_id=MHV1765191.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 84652 87744 . - . ID=gene-AC3ASX_07560;Name=AC3ASX_07560;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07560;pseudo=true JBYLIA010000002.1 Protein Homology CDS 84652 87744 . - 0 ID=cds-AC3ASX_07560;Parent=gene-AC3ASX_07560;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011648770.1;locus_tag=AC3ASX_07560;product=efflux RND transporter permease subunit;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 87744 89114 . - . ID=gene-AC3ASX_07565;Name=AC3ASX_07565;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07565;pseudo=true JBYLIA010000002.1 Protein Homology CDS 87744 89114 . - 0 ID=cds-AC3ASX_07565;Parent=gene-AC3ASX_07565;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548953.1;locus_tag=AC3ASX_07565;product=efflux RND transporter periplasmic adaptor subunit;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 89131 89626 . - . ID=gene-AC3ASX_07570;Name=AC3ASX_07570;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07570;pseudo=true JBYLIA010000002.1 Protein Homology CDS 89131 89626 . - 0 ID=cds-AC3ASX_07570;Parent=gene-AC3ASX_07570;Note=frameshifted%3B internal stop;Ontology_term=GO:0006457,GO:0009055,GO:0015035;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429109.1;locus_tag=AC3ASX_07570;product=disulfide bond formation protein B;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 89674 90771 . - . ID=gene-AC3ASX_07575;Name=AC3ASX_07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07575 JBYLIA010000002.1 Protein Homology CDS 89674 90771 . - 0 ID=cds-MHV1765192.1;Parent=gene-AC3ASX_07575;Dbxref=NCBI_GP:MHV1765192.1;Name=MHV1765192.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035095.1;locus_tag=AC3ASX_07575;product=CCA tRNA nucleotidyltransferase;protein_id=MHV1765192.1;transl_table=11 JBYLIA010000002.1 Genbank gene 90876 92705 . + . ID=gene-AC3ASX_07580;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=AC3ASX_07580 JBYLIA010000002.1 Protein Homology CDS 90876 92705 . + 0 ID=cds-MHV1765193.1;Parent=gene-AC3ASX_07580;Dbxref=NCBI_GP:MHV1765193.1;Name=MHV1765193.1;Ontology_term=GO:0006869,GO:0005319,GO:0005524,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=lipid carrier activity|0005319||IEA,ATP binding|0005524||IEA;go_process=lipid transport|0006869||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019850.1;locus_tag=AC3ASX_07580;product=lipid A export permease/ATP-binding protein MsbA;protein_id=MHV1765193.1;transl_table=11 JBYLIA010000002.1 Genbank gene 92711 93679 . + . ID=gene-AC3ASX_07585;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=AC3ASX_07585 JBYLIA010000002.1 Protein Homology CDS 92711 93679 . + 0 ID=cds-MHV1765194.1;Parent=gene-AC3ASX_07585;Dbxref=NCBI_GP:MHV1765194.1;Name=MHV1765194.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=lipid-A 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019528.1;locus_tag=AC3ASX_07585;product=tetraacyldisaccharide 4'-kinase;protein_id=MHV1765194.1;transl_table=11 JBYLIA010000002.1 Genbank gene 93776 96469 . + . ID=gene-AC3ASX_07590;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=AC3ASX_07590 JBYLIA010000002.1 Protein Homology CDS 93776 96469 . + 0 ID=cds-MHV1765195.1;Parent=gene-AC3ASX_07590;Dbxref=NCBI_GP:MHV1765195.1;Name=MHV1765195.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339916.1;locus_tag=AC3ASX_07590;product=DNA polymerase I;protein_id=MHV1765195.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 96484 97242 . + . ID=gene-AC3ASX_07595;Name=AC3ASX_07595;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07595;pseudo=true JBYLIA010000002.1 Protein Homology CDS 96484 97242 . + 0 ID=cds-AC3ASX_07595;Parent=gene-AC3ASX_07595;Note=frameshifted%3B internal stop;Ontology_term=GO:0004594;gbkey=CDS;go_function=pantothenate kinase activity|0004594||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548947.1;locus_tag=AC3ASX_07595;product=type III pantothenate kinase;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 97236 98480 . + . ID=gene-AC3ASX_07600;Name=AC3ASX_07600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07600 JBYLIA010000002.1 Protein Homology CDS 97236 98480 . + 0 ID=cds-MHV1765196.1;Parent=gene-AC3ASX_07600;Dbxref=NCBI_GP:MHV1765196.1;Name=MHV1765196.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429113.1;locus_tag=AC3ASX_07600;product=phosphopentomutase;protein_id=MHV1765196.1;transl_table=11 JBYLIA010000002.1 Genbank gene 98443 99204 . + . ID=gene-AC3ASX_07605;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=AC3ASX_07605 JBYLIA010000002.1 Protein Homology CDS 98443 99204 . + 0 ID=cds-MHV1765197.1;Parent=gene-AC3ASX_07605;Dbxref=NCBI_GP:MHV1765197.1;Name=MHV1765197.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003035083.1;locus_tag=AC3ASX_07605;product=deoxyribose-phosphate aldolase;protein_id=MHV1765197.1;transl_table=11 JBYLIA010000002.1 Genbank gene 99194 100216 . + . ID=gene-AC3ASX_07610;Name=AC3ASX_07610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07610 JBYLIA010000002.1 Protein Homology CDS 99194 100216 . + 0 ID=cds-MHV1765198.1;Parent=gene-AC3ASX_07610;Dbxref=NCBI_GP:MHV1765198.1;Name=MHV1765198.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017090.1;locus_tag=AC3ASX_07610;product=nucleoside transporter C-terminal domain-containing protein;protein_id=MHV1765198.1;transl_table=11 JBYLIA010000002.1 Genbank gene 100235 101437 . + . ID=gene-AC3ASX_07615;Name=AC3ASX_07615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07615 JBYLIA010000002.1 Protein Homology CDS 100235 101437 . + 0 ID=cds-MHV1765199.1;Parent=gene-AC3ASX_07615;Dbxref=NCBI_GP:MHV1765199.1;Name=MHV1765199.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019862.1;locus_tag=AC3ASX_07615;product=NupC/NupG family nucleoside CNT transporter;protein_id=MHV1765199.1;transl_table=11 JBYLIA010000002.1 Genbank gene 101450 102079 . + . ID=gene-AC3ASX_07620;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=AC3ASX_07620 JBYLIA010000002.1 Protein Homology CDS 101450 102079 . + 0 ID=cds-MHV1765200.1;Parent=gene-AC3ASX_07620;Dbxref=NCBI_GP:MHV1765200.1;Name=MHV1765200.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548942.1;locus_tag=AC3ASX_07620;product=dTMP kinase;protein_id=MHV1765200.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 102141 103744 . + . ID=gene-AC3ASX_07625;Name=AC3ASX_07625;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07625;pseudo=true JBYLIA010000002.1 Protein Homology CDS 102141 103744 . + 0 ID=cds-AC3ASX_07625;Parent=gene-AC3ASX_07625;Note=frameshifted%3B internal stop;Ontology_term=GO:0006415,GO:0003924;gbkey=CDS;go_function=GTPase activity|0003924||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017082.1;locus_tag=AC3ASX_07625;product=peptide chain release factor 3;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 103797 105113 . + . ID=gene-AC3ASX_07630;Name=AC3ASX_07630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07630 JBYLIA010000002.1 Protein Homology CDS 103797 105113 . + 0 ID=cds-MHV1765201.1;Parent=gene-AC3ASX_07630;Dbxref=NCBI_GP:MHV1765201.1;Name=MHV1765201.1;Ontology_term=GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019870.1;locus_tag=AC3ASX_07630;product=LysM peptidoglycan-binding domain-containing protein;protein_id=MHV1765201.1;transl_table=11 JBYLIA010000002.1 Genbank gene 105147 106142 . + . ID=gene-AC3ASX_07635;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=AC3ASX_07635 JBYLIA010000002.1 Protein Homology CDS 105147 106142 . + 0 ID=cds-MHV1765202.1;Parent=gene-AC3ASX_07635;Dbxref=NCBI_GP:MHV1765202.1;Name=MHV1765202.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550230.1;locus_tag=AC3ASX_07635;product=signal recognition particle-docking protein FtsY;protein_id=MHV1765202.1;transl_table=11 JBYLIA010000002.1 Genbank gene 106233 108455 . + . ID=gene-AC3ASX_07640;Name=AC3ASX_07640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07640 JBYLIA010000002.1 Protein Homology CDS 106233 108455 . + 0 ID=cds-MHV1765203.1;Parent=gene-AC3ASX_07640;Dbxref=NCBI_GP:MHV1765203.1;Name=MHV1765203.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017075.1;locus_tag=AC3ASX_07640;product=UvrD-helicase domain-containing protein;protein_id=MHV1765203.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 108445 109643 . - . ID=gene-AC3ASX_07645;Name=AC3ASX_07645;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07645;pseudo=true JBYLIA010000002.1 Protein Homology CDS 108445 109643 . - 0 ID=cds-AC3ASX_07645;Parent=gene-AC3ASX_07645;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922397.1;locus_tag=AC3ASX_07645;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 110604 111206 . + . ID=gene-AC3ASX_07650;Name=AC3ASX_07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07650 JBYLIA010000002.1 Protein Homology CDS 110604 111206 . + 0 ID=cds-MHV1765204.1;Parent=gene-AC3ASX_07650;Dbxref=NCBI_GP:MHV1765204.1;Name=MHV1765204.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280422.1;locus_tag=AC3ASX_07650;product=hypothetical protein;protein_id=MHV1765204.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 111377 112354 . + . ID=gene-AC3ASX_07655;Name=AC3ASX_07655;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07655;pseudo=true JBYLIA010000002.1 Protein Homology CDS 111377 112354 . + 0 ID=cds-AC3ASX_07655;Parent=gene-AC3ASX_07655;Note=internal stop;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: protein motif:HMM:NF019310.7;locus_tag=AC3ASX_07655;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 112648 114150 . + . ID=gene-AC3ASX_07660;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=pseudogene;locus_tag=AC3ASX_07660;pseudo=true JBYLIA010000002.1 Protein Homology CDS 112648 114150 . + 0 ID=cds-AC3ASX_07660;Parent=gene-AC3ASX_07660;Note=internal stop;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: protein motif:HMM:NF014801.7;locus_tag=AC3ASX_07660;product=glycerol kinase GlpK;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 114154 115685 . + . ID=gene-AC3ASX_07665;Name=AC3ASX_07665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07665;pseudo=true JBYLIA010000002.1 Protein Homology CDS 114154 115685 . + 0 ID=cds-AC3ASX_07665;Parent=gene-AC3ASX_07665;Note=frameshifted;Ontology_term=GO:0006072,GO:0004368,GO:0071949,GO:0009331;gbkey=CDS;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FAD binding|0071949||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339891.1;locus_tag=AC3ASX_07665;product=glycerol-3-phosphate dehydrogenase/oxidase;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 115695 116459 . + . ID=gene-AC3ASX_07670;Name=AC3ASX_07670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07670;pseudo=true JBYLIA010000002.1 Protein Homology CDS 115695 116459 . + 0 ID=cds-AC3ASX_07670;Parent=gene-AC3ASX_07670;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011648782.1;locus_tag=AC3ASX_07670;product=MIP/aquaporin family protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 116466 117191 . + . ID=gene-AC3ASX_07675;Name=AC3ASX_07675;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07675;pseudo=true JBYLIA010000002.1 Protein Homology CDS 116466 117191 . + 0 ID=cds-AC3ASX_07675;Parent=gene-AC3ASX_07675;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548923.1;locus_tag=AC3ASX_07675;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 117184 117684 . + . ID=gene-AC3ASX_07680;Name=AC3ASX_07680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07680;pseudo=true JBYLIA010000002.1 Protein Homology CDS 117184 117684 . + 0 ID=cds-AC3ASX_07680;Parent=gene-AC3ASX_07680;Note=frameshifted;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548922.1;locus_tag=AC3ASX_07680;product=mechanosensitive ion channel domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 117677 118979 . + . ID=gene-AC3ASX_07685;Name=AC3ASX_07685;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07685;pseudo=true JBYLIA010000002.1 Protein Homology CDS 117677 118979 . + 0 ID=cds-AC3ASX_07685;Parent=gene-AC3ASX_07685;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550218.1;locus_tag=AC3ASX_07685;product=AAA family ATPase;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 119137 119221 . + . ID=gene-AC3ASX_07690;Name=AC3ASX_07690;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_07690 JBYLIA010000002.1 tRNAscan-SE tRNA 119137 119221 . + . ID=rna-AC3ASX_07690;Parent=gene-AC3ASX_07690;anticodon=(pos:119171..119173);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_07690;product=tRNA-Tyr JBYLIA010000002.1 tRNAscan-SE exon 119137 119221 . + . ID=exon-AC3ASX_07690-1;Parent=rna-AC3ASX_07690;anticodon=(pos:119171..119173);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_07690;product=tRNA-Tyr JBYLIA010000002.1 Genbank gene 119223 119296 . + . ID=gene-AC3ASX_07695;Name=AC3ASX_07695;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_07695 JBYLIA010000002.1 tRNAscan-SE tRNA 119223 119296 . + . ID=rna-AC3ASX_07695;Parent=gene-AC3ASX_07695;anticodon=(pos:119255..119257);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_07695;product=tRNA-Gly JBYLIA010000002.1 tRNAscan-SE exon 119223 119296 . + . ID=exon-AC3ASX_07695-1;Parent=rna-AC3ASX_07695;anticodon=(pos:119255..119257);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_07695;product=tRNA-Gly JBYLIA010000002.1 Genbank gene 119325 119400 . + . ID=gene-AC3ASX_07700;Name=AC3ASX_07700;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_07700 JBYLIA010000002.1 tRNAscan-SE tRNA 119325 119400 . + . ID=rna-AC3ASX_07700;Parent=gene-AC3ASX_07700;anticodon=(pos:119358..119360);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_07700;product=tRNA-Thr JBYLIA010000002.1 tRNAscan-SE exon 119325 119400 . + . ID=exon-AC3ASX_07700-1;Parent=rna-AC3ASX_07700;anticodon=(pos:119358..119360);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_07700;product=tRNA-Thr JBYLIA010000002.1 Genbank gene 119445 120629 . + . ID=gene-AC3ASX_07705;Name=tuf;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=AC3ASX_07705 JBYLIA010000002.1 Protein Homology CDS 119445 120629 . + 0 ID=cds-MHV1765205.1;Parent=gene-AC3ASX_07705;Dbxref=NCBI_GP:MHV1765205.1;Name=MHV1765205.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003028672.1;locus_tag=AC3ASX_07705;product=elongation factor Tu;protein_id=MHV1765205.1;transl_table=11 JBYLIA010000002.1 Genbank gene 120649 120724 . + . ID=gene-AC3ASX_07710;Name=AC3ASX_07710;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_07710 JBYLIA010000002.1 tRNAscan-SE tRNA 120649 120724 . + . ID=rna-AC3ASX_07710;Parent=gene-AC3ASX_07710;anticodon=(pos:120682..120684);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_07710;product=tRNA-Trp JBYLIA010000002.1 tRNAscan-SE exon 120649 120724 . + . ID=exon-AC3ASX_07710-1;Parent=rna-AC3ASX_07710;anticodon=(pos:120682..120684);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_07710;product=tRNA-Trp JBYLIA010000002.1 Genbank gene 120813 121292 . + . ID=gene-AC3ASX_07715;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=AC3ASX_07715 JBYLIA010000002.1 Protein Homology CDS 120813 121292 . + 0 ID=cds-MHV1765206.1;Parent=gene-AC3ASX_07715;Dbxref=NCBI_GP:MHV1765206.1;Name=MHV1765206.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010031258.1;locus_tag=AC3ASX_07715;product=preprotein translocase subunit SecE;protein_id=MHV1765206.1;transl_table=11 JBYLIA010000002.1 Genbank gene 121310 121843 . + . ID=gene-AC3ASX_07720;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=AC3ASX_07720 JBYLIA010000002.1 Protein Homology CDS 121310 121843 . + 0 ID=cds-MHV1765207.1;Parent=gene-AC3ASX_07720;Dbxref=NCBI_GP:MHV1765207.1;Name=MHV1765207.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287055.1;locus_tag=AC3ASX_07720;product=transcription termination/antitermination protein NusG;protein_id=MHV1765207.1;transl_table=11 JBYLIA010000002.1 Genbank gene 121912 122346 . + . ID=gene-AC3ASX_07725;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=AC3ASX_07725 JBYLIA010000002.1 Protein Homology CDS 121912 122346 . + 0 ID=cds-MHV1765208.1;Parent=gene-AC3ASX_07725;Dbxref=NCBI_GP:MHV1765208.1;Name=MHV1765208.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003024803.1;locus_tag=AC3ASX_07725;product=50S ribosomal protein L11;protein_id=MHV1765208.1;transl_table=11 JBYLIA010000002.1 Genbank gene 122349 123044 . + . ID=gene-AC3ASX_07730;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=AC3ASX_07730 JBYLIA010000002.1 Protein Homology CDS 122349 123044 . + 0 ID=cds-MHV1765209.1;Parent=gene-AC3ASX_07730;Dbxref=NCBI_GP:MHV1765209.1;Name=MHV1765209.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280432.1;locus_tag=AC3ASX_07730;product=50S ribosomal protein L1;protein_id=MHV1765209.1;transl_table=11 JBYLIA010000002.1 Genbank gene 123215 123733 . + . ID=gene-AC3ASX_07735;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=AC3ASX_07735 JBYLIA010000002.1 Protein Homology CDS 123215 123733 . + 0 ID=cds-MHV1765210.1;Parent=gene-AC3ASX_07735;Dbxref=NCBI_GP:MHV1765210.1;Name=MHV1765210.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287058.1;locus_tag=AC3ASX_07735;product=50S ribosomal protein L10;protein_id=MHV1765210.1;transl_table=11 JBYLIA010000002.1 Genbank gene 123793 124170 . + . ID=gene-AC3ASX_07740;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=AC3ASX_07740 JBYLIA010000002.1 Protein Homology CDS 123793 124170 . + 0 ID=cds-MHV1765211.1;Parent=gene-AC3ASX_07740;Dbxref=NCBI_GP:MHV1765211.1;Name=MHV1765211.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003024808.1;locus_tag=AC3ASX_07740;product=50S ribosomal protein L7/L12;protein_id=MHV1765211.1;transl_table=11 JBYLIA010000002.1 Genbank gene 124323 128399 . + . ID=gene-AC3ASX_07745;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=AC3ASX_07745 JBYLIA010000002.1 Protein Homology CDS 124323 128399 . + 0 ID=cds-MHV1765212.1;Parent=gene-AC3ASX_07745;Dbxref=NCBI_GP:MHV1765212.1;Name=MHV1765212.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019613.1;locus_tag=AC3ASX_07745;product=DNA-directed RNA polymerase subunit beta;protein_id=MHV1765212.1;transl_table=11 JBYLIA010000002.1 Genbank gene 128461 132729 . + . ID=gene-AC3ASX_07750;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=AC3ASX_07750 JBYLIA010000002.1 Protein Homology CDS 128461 132729 . + 0 ID=cds-MHV1765213.1;Parent=gene-AC3ASX_07750;Dbxref=NCBI_GP:MHV1765213.1;Name=MHV1765213.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019910.1;locus_tag=AC3ASX_07750;product=DNA-directed RNA polymerase subunit beta';protein_id=MHV1765213.1;transl_table=11 JBYLIA010000002.1 Genbank gene 132832 133077 . + . ID=gene-AC3ASX_07755;Name=AC3ASX_07755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07755 JBYLIA010000002.1 Protein Homology CDS 132832 133077 . + 0 ID=cds-MHV1765214.1;Parent=gene-AC3ASX_07755;Dbxref=NCBI_GP:MHV1765214.1;Name=MHV1765214.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287062.1;locus_tag=AC3ASX_07755;product=lipopolysaccharide assembly protein LapA domain-containing protein;protein_id=MHV1765214.1;transl_table=11 JBYLIA010000002.1 Genbank gene 133077 134087 . + . ID=gene-AC3ASX_07760;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=AC3ASX_07760 JBYLIA010000002.1 Protein Homology CDS 133077 134087 . + 0 ID=cds-MHV1765215.1;Parent=gene-AC3ASX_07760;Dbxref=NCBI_GP:MHV1765215.1;Name=MHV1765215.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550214.1;locus_tag=AC3ASX_07760;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=MHV1765215.1;transl_table=11 JBYLIA010000002.1 Genbank gene 134205 135371 . + . ID=gene-AC3ASX_07765;Name=AC3ASX_07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07765 JBYLIA010000002.1 Protein Homology CDS 134205 135371 . + 0 ID=cds-MHV1765216.1;Parent=gene-AC3ASX_07765;Dbxref=NCBI_GP:MHV1765216.1;Name=MHV1765216.1;Ontology_term=GO:0006633,GO:0006636,GO:0016717,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on paired donors%2C with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water|0016717||IEA,metal ion binding|0046872||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,unsaturated fatty acid biosynthetic process|0006636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550213.1;locus_tag=AC3ASX_07765;product=acyl-CoA desaturase;protein_id=MHV1765216.1;transl_table=11 JBYLIA010000002.1 Genbank gene 135730 136890 . - . ID=gene-AC3ASX_07770;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=AC3ASX_07770 JBYLIA010000002.1 Protein Homology CDS 135730 136890 . - 0 ID=cds-MHV1765217.1;Parent=gene-AC3ASX_07770;Dbxref=NCBI_GP:MHV1765217.1;Name=MHV1765217.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280438.1;locus_tag=AC3ASX_07770;product=methionine adenosyltransferase;protein_id=MHV1765217.1;transl_table=11 JBYLIA010000002.1 Genbank gene 137188 137436 . + . ID=gene-AC3ASX_07775;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=AC3ASX_07775 JBYLIA010000002.1 Protein Homology CDS 137188 137436 . + 0 ID=cds-MHV1765218.1;Parent=gene-AC3ASX_07775;Dbxref=NCBI_GP:MHV1765218.1;Name=MHV1765218.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287066.1;locus_tag=AC3ASX_07775;product=30S ribosomal protein S16;protein_id=MHV1765218.1;transl_table=11 JBYLIA010000002.1 Genbank gene 137471 137980 . + . ID=gene-AC3ASX_07780;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=AC3ASX_07780 JBYLIA010000002.1 Protein Homology CDS 137471 137980 . + 0 ID=cds-MHV1765219.1;Parent=gene-AC3ASX_07780;Dbxref=NCBI_GP:MHV1765219.1;Name=MHV1765219.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019921.1;locus_tag=AC3ASX_07780;product=ribosome maturation factor RimM;protein_id=MHV1765219.1;transl_table=11 JBYLIA010000002.1 Genbank gene 138228 138986 . + . ID=gene-AC3ASX_07785;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=AC3ASX_07785 JBYLIA010000002.1 Protein Homology CDS 138228 138986 . + 0 ID=cds-MHV1765220.1;Parent=gene-AC3ASX_07785;Dbxref=NCBI_GP:MHV1765220.1;Name=MHV1765220.1;Ontology_term=GO:0008033,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548906.1;locus_tag=AC3ASX_07785;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=MHV1765220.1;transl_table=11 JBYLIA010000002.1 Genbank gene 138986 139333 . + . ID=gene-AC3ASX_07790;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=AC3ASX_07790 JBYLIA010000002.1 Protein Homology CDS 138986 139333 . + 0 ID=cds-MHV1765221.1;Parent=gene-AC3ASX_07790;Dbxref=NCBI_GP:MHV1765221.1;Name=MHV1765221.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922421.1;locus_tag=AC3ASX_07790;product=50S ribosomal protein L19;protein_id=MHV1765221.1;transl_table=11 JBYLIA010000002.1 Genbank gene 139352 140230 . + . ID=gene-AC3ASX_07795;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=AC3ASX_07795 JBYLIA010000002.1 Protein Homology CDS 139352 140230 . + 0 ID=cds-MHV1765222.1;Parent=gene-AC3ASX_07795;Dbxref=NCBI_GP:MHV1765222.1;Name=MHV1765222.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017208.1;locus_tag=AC3ASX_07795;product=site-specific tyrosine recombinase XerD;protein_id=MHV1765222.1;transl_table=11 JBYLIA010000002.1 Genbank gene 140374 141219 . + . ID=gene-AC3ASX_07800;Name=AC3ASX_07800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07800 JBYLIA010000002.1 Protein Homology CDS 140374 141219 . + 0 ID=cds-MHV1765223.1;Parent=gene-AC3ASX_07800;Dbxref=NCBI_GP:MHV1765223.1;Name=MHV1765223.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003024835.1;locus_tag=AC3ASX_07800;product=2OG-Fe(II) oxygenase family protein;protein_id=MHV1765223.1;transl_table=11 JBYLIA010000002.1 Genbank gene 141225 141809 . + . ID=gene-AC3ASX_07805;Name=AC3ASX_07805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07805 JBYLIA010000002.1 Protein Homology CDS 141225 141809 . + 0 ID=cds-MHV1765224.1;Parent=gene-AC3ASX_07805;Dbxref=NCBI_GP:MHV1765224.1;Name=MHV1765224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017204.1;locus_tag=AC3ASX_07805;product=HAD family acid phosphatase;protein_id=MHV1765224.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 141815 142229 . - . ID=gene-AC3ASX_07810;Name=AC3ASX_07810;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07810;pseudo=true JBYLIA010000002.1 Protein Homology CDS 141815 142229 . - 0 ID=cds-AC3ASX_07810;Parent=gene-AC3ASX_07810;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550208.1;locus_tag=AC3ASX_07810;product=DMT family transporter;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 143451 143918 . + . ID=gene-AC3ASX_07815;Name=AC3ASX_07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07815 JBYLIA010000002.1 Protein Homology CDS 143451 143918 . + 0 ID=cds-MHV1765225.1;Parent=gene-AC3ASX_07815;Dbxref=NCBI_GP:MHV1765225.1;Name=MHV1765225.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548899.1;locus_tag=AC3ASX_07815;product=RNA pyrophosphohydrolase;protein_id=MHV1765225.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 143932 144548 . - . ID=gene-AC3ASX_07820;Name=AC3ASX_07820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07820;pseudo=true JBYLIA010000002.1 Protein Homology CDS 143932 144548 . - 0 ID=cds-AC3ASX_07820;Parent=gene-AC3ASX_07820;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019938.1;locus_tag=AC3ASX_07820;product=phosphatase PAP2 family protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 144627 145148 . + . ID=gene-AC3ASX_07825;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=AC3ASX_07825 JBYLIA010000002.1 Protein Homology CDS 144627 145148 . + 0 ID=cds-MHV1765226.1;Parent=gene-AC3ASX_07825;Dbxref=NCBI_GP:MHV1765226.1;Name=MHV1765226.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017191.1;locus_tag=AC3ASX_07825;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=MHV1765226.1;transl_table=11 JBYLIA010000002.1 Genbank gene 145221 147104 . - . ID=gene-AC3ASX_07830;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=AC3ASX_07830 JBYLIA010000002.1 Protein Homology CDS 145221 147104 . - 0 ID=cds-MHV1765227.1;Parent=gene-AC3ASX_07830;Dbxref=NCBI_GP:MHV1765227.1;Name=MHV1765227.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034998.1;locus_tag=AC3ASX_07830;product=DNA topoisomerase IV subunit B;protein_id=MHV1765227.1;transl_table=11 JBYLIA010000002.1 Genbank gene 147196 148377 . - . ID=gene-AC3ASX_07835;Name=AC3ASX_07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07835 JBYLIA010000002.1 Protein Homology CDS 147196 148377 . - 0 ID=cds-MHV1765228.1;Parent=gene-AC3ASX_07835;Dbxref=NCBI_GP:MHV1765228.1;Name=MHV1765228.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714699.1;locus_tag=AC3ASX_07835;product=multidrug effflux MFS transporter;protein_id=MHV1765228.1;transl_table=11 JBYLIA010000002.1 Genbank gene 148377 149747 . - . ID=gene-AC3ASX_07840;Name=AC3ASX_07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07840 JBYLIA010000002.1 Protein Homology CDS 148377 149747 . - 0 ID=cds-MHV1765229.1;Parent=gene-AC3ASX_07840;Dbxref=NCBI_GP:MHV1765229.1;Name=MHV1765229.1;Ontology_term=GO:0043165,GO:0051205,GO:0070968;gbkey=CDS;go_function=pyrroloquinoline quinone binding|0070968||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein insertion into membrane|0051205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034994.1;locus_tag=AC3ASX_07840;product=outer membrane protein assembly factor BamB;protein_id=MHV1765229.1;transl_table=11 JBYLIA010000002.1 Genbank gene 149750 150388 . - . ID=gene-AC3ASX_07845;Name=AC3ASX_07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07845 JBYLIA010000002.1 Protein Homology CDS 149750 150388 . - 0 ID=cds-MHV1765230.1;Parent=gene-AC3ASX_07845;Dbxref=NCBI_GP:MHV1765230.1;Name=MHV1765230.1;Ontology_term=GO:0005515,GO:0044877;gbkey=CDS;go_function=protein binding|0005515||IEA,protein-containing complex binding|0044877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429138.1;locus_tag=AC3ASX_07845;product=YfgM family protein;protein_id=MHV1765230.1;transl_table=11 JBYLIA010000002.1 Genbank gene 150569 151813 . + . ID=gene-AC3ASX_07850;Name=AC3ASX_07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07850 JBYLIA010000002.1 Protein Homology CDS 150569 151813 . + 0 ID=cds-MHV1765231.1;Parent=gene-AC3ASX_07850;Dbxref=NCBI_GP:MHV1765231.1;Name=MHV1765231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550200.1;locus_tag=AC3ASX_07850;product=glutamyl-tRNA reductase;protein_id=MHV1765231.1;transl_table=11 JBYLIA010000002.1 Genbank gene 151814 152899 . + . ID=gene-AC3ASX_07855;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=AC3ASX_07855 JBYLIA010000002.1 Protein Homology CDS 151814 152899 . + 0 ID=cds-MHV1765232.1;Parent=gene-AC3ASX_07855;Dbxref=NCBI_GP:MHV1765232.1;Name=MHV1765232.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922438.1;locus_tag=AC3ASX_07855;product=peptide chain release factor 1;protein_id=MHV1765232.1;transl_table=11 JBYLIA010000002.1 Genbank gene 152892 153746 . + . ID=gene-AC3ASX_07860;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;gene_synonym=hemK;locus_tag=AC3ASX_07860 JBYLIA010000002.1 Protein Homology CDS 152892 153746 . + 0 ID=cds-MHV1765233.1;Parent=gene-AC3ASX_07860;Dbxref=NCBI_GP:MHV1765233.1;Name=MHV1765233.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017176.1;locus_tag=AC3ASX_07860;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=MHV1765233.1;transl_table=11 JBYLIA010000002.1 Genbank gene 153737 154204 . - . ID=gene-AC3ASX_07865;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=AC3ASX_07865 JBYLIA010000002.1 Protein Homology CDS 153737 154204 . - 0 ID=cds-MHV1765234.1;Parent=gene-AC3ASX_07865;Dbxref=NCBI_GP:MHV1765234.1;Name=MHV1765234.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003042708.1;locus_tag=AC3ASX_07865;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=MHV1765234.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 154208 154922 . - . ID=gene-AC3ASX_07870;Name=AC3ASX_07870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07870;pseudo=true JBYLIA010000002.1 Protein Homology CDS 154208 154922 . - 0 ID=cds-AC3ASX_07870;Parent=gene-AC3ASX_07870;Note=frameshifted%3B internal stop;Ontology_term=GO:0033194;gbkey=CDS;go_process=response to hydroperoxide|0033194||IEA;inference=COORDINATES: protein motif:HMM:NF015820.7;locus_tag=AC3ASX_07870;product=YaaA family protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 155083 155179 . + . ID=gene-AC3ASX_07875;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=AC3ASX_07875 JBYLIA010000002.1 cmsearch SRP_RNA 155083 155179 . + . ID=rna-AC3ASX_07875;Parent=gene-AC3ASX_07875;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_07875;product=signal recognition particle sRNA small type JBYLIA010000002.1 cmsearch exon 155083 155179 . + . ID=exon-AC3ASX_07875-1;Parent=rna-AC3ASX_07875;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_07875;product=signal recognition particle sRNA small type JBYLIA010000002.1 Genbank gene 156834 156909 . - . ID=gene-AC3ASX_07880;Name=AC3ASX_07880;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_07880 JBYLIA010000002.1 tRNAscan-SE tRNA 156834 156909 . - . ID=rna-AC3ASX_07880;Parent=gene-AC3ASX_07880;anticodon=(pos:complement(156873..156875));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_07880;product=tRNA-Arg JBYLIA010000002.1 tRNAscan-SE exon 156834 156909 . - . ID=exon-AC3ASX_07880-1;Parent=rna-AC3ASX_07880;anticodon=(pos:complement(156873..156875));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_07880;product=tRNA-Arg JBYLIA010000002.1 Genbank pseudogene 156924 157361 . - . ID=gene-AC3ASX_07885;Name=AC3ASX_07885;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07885;pseudo=true JBYLIA010000002.1 Protein Homology CDS 156924 157361 . - 0 ID=cds-AC3ASX_07885;Parent=gene-AC3ASX_07885;Note=frameshifted%3B internal stop;Ontology_term=GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003030082.1;locus_tag=AC3ASX_07885;product=PACE efflux transporter;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 157649 157936 . + . ID=gene-AC3ASX_07890;Name=AC3ASX_07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07890 JBYLIA010000002.1 Protein Homology CDS 157649 157936 . + 0 ID=cds-MHV1765235.1;Parent=gene-AC3ASX_07890;Dbxref=NCBI_GP:MHV1765235.1;Name=MHV1765235.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022662.1;locus_tag=AC3ASX_07890;product=co-chaperone GroES;protein_id=MHV1765235.1;transl_table=11 JBYLIA010000002.1 Genbank gene 157974 159608 . + . ID=gene-AC3ASX_07895;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=AC3ASX_07895 JBYLIA010000002.1 Protein Homology CDS 157974 159608 . + 0 ID=cds-MHV1765236.1;Parent=gene-AC3ASX_07895;Dbxref=NCBI_GP:MHV1765236.1;Name=MHV1765236.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280484.1;locus_tag=AC3ASX_07895;product=chaperonin GroEL;protein_id=MHV1765236.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 159707 160908 . + . ID=gene-AC3ASX_07900;Name=AC3ASX_07900;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07900;pseudo=true JBYLIA010000002.1 Protein Homology CDS 159707 160908 . + 0 ID=cds-AC3ASX_07900;Parent=gene-AC3ASX_07900;Note=frameshifted%3B internal stop;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429161.1;locus_tag=AC3ASX_07900;product=APC family permease;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 160949 161773 . - . ID=gene-AC3ASX_07905;Name=AC3ASX_07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07905 JBYLIA010000002.1 Protein Homology CDS 160949 161773 . - 0 ID=cds-MHV1765237.1;Parent=gene-AC3ASX_07905;Dbxref=NCBI_GP:MHV1765237.1;Name=MHV1765237.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034969.1;locus_tag=AC3ASX_07905;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=MHV1765237.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 162020 162489 . - . ID=gene-AC3ASX_07910;Name=AC3ASX_07910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07910;pseudo=true JBYLIA010000002.1 Protein Homology CDS 162020 162489 . - 0 ID=cds-AC3ASX_07910;Parent=gene-AC3ASX_07910;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548881.1;locus_tag=AC3ASX_07910;product=FTL_1293 family small RNA FtrC-regulated protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 162539 163649 . - . ID=gene-AC3ASX_07915;Name=AC3ASX_07915;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07915;pseudo=true JBYLIA010000002.1 Protein Homology CDS 162539 163649 . - 0 ID=cds-AC3ASX_07915;Parent=gene-AC3ASX_07915;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922472.1;locus_tag=AC3ASX_07915;product=aminoacetone oxidase family FAD-binding enzyme;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 164956 166305 . - . ID=gene-AC3ASX_07920;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=AC3ASX_07920 JBYLIA010000002.1 Protein Homology CDS 164956 166305 . - 0 ID=cds-MHV1765238.1;Parent=gene-AC3ASX_07920;Dbxref=NCBI_GP:MHV1765238.1;Name=MHV1765238.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550192.1;locus_tag=AC3ASX_07920;product=NADP-specific glutamate dehydrogenase;protein_id=MHV1765238.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 166800 167484 . + . ID=gene-AC3ASX_07925;Name=AC3ASX_07925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07925;pseudo=true JBYLIA010000002.1 Protein Homology CDS 166800 167484 . + 0 ID=cds-AC3ASX_07925;Parent=gene-AC3ASX_07925;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429209.1;locus_tag=AC3ASX_07925;product=L%2CD-transpeptidase family protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 167497 168215 . + . ID=gene-AC3ASX_07930;Name=AC3ASX_07930;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07930;pseudo=true JBYLIA010000002.1 Protein Homology CDS 167497 168215 . + 0 ID=cds-AC3ASX_07930;Parent=gene-AC3ASX_07930;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014397.1%2CRefSeq:WP_003014398.1;locus_tag=AC3ASX_07930;product=amino acid permease;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 168883 169437 . - . ID=gene-AC3ASX_07935;Name=AC3ASX_07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07935 JBYLIA010000002.1 Protein Homology CDS 168883 169437 . - 0 ID=cds-MHV1765239.1;Parent=gene-AC3ASX_07935;Dbxref=NCBI_GP:MHV1765239.1;Name=MHV1765239.1;Ontology_term=GO:0006281,GO:0032259,GO:0003677,GO:0003908,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022399.1;locus_tag=AC3ASX_07935;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=MHV1765239.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 169484 170179 . + . ID=gene-AC3ASX_07940;Name=AC3ASX_07940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07940;pseudo=true JBYLIA010000002.1 Protein Homology CDS 169484 170179 . + 0 ID=cds-AC3ASX_07940;Parent=gene-AC3ASX_07940;Note=frameshifted%3B internal stop;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037505.1;locus_tag=AC3ASX_07940;product=TVP38/TMEM64 family protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 170192 171587 . + . ID=gene-AC3ASX_07945;Name=AC3ASX_07945;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07945;pseudo=true JBYLIA010000002.1 Protein Homology CDS 170192 171587 . + 0 ID=cds-AC3ASX_07945;Parent=gene-AC3ASX_07945;Note=frameshifted%3B internal stop;Ontology_term=GO:0000166,GO:0016491;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018319.1;locus_tag=AC3ASX_07945;product=dihydrolipoyl dehydrogenase family protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 172104 172688 . + . ID=gene-AC3ASX_07950;Name=AC3ASX_07950;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07950;pseudo=true JBYLIA010000002.1 Protein Homology CDS 172104 172688 . + 0 ID=cds-AC3ASX_07950;Parent=gene-AC3ASX_07950;Note=frameshifted;Ontology_term=GO:0008654,GO:0016780,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550189.1;locus_tag=AC3ASX_07950;product=CDP-alcohol phosphatidyltransferase family protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 172685 172957 . + . ID=gene-AC3ASX_07955;Name=AC3ASX_07955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07955;pseudo=true JBYLIA010000002.1 Protein Homology CDS 172685 172957 . + 0 ID=cds-AC3ASX_07955;Parent=gene-AC3ASX_07955;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014409.1;locus_tag=AC3ASX_07955;product=membrane lipoprotein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 173165 174085 . + . ID=gene-AC3ASX_07960;Name=AC3ASX_07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07960 JBYLIA010000002.1 Protein Homology CDS 173165 174085 . + 0 ID=cds-MHV1765240.1;Parent=gene-AC3ASX_07960;Dbxref=NCBI_GP:MHV1765240.1;Name=MHV1765240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550180.1;locus_tag=AC3ASX_07960;product=DnaJ C-terminal domain-containing protein;protein_id=MHV1765240.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 174088 174836 . - . ID=gene-AC3ASX_07965;Name=AC3ASX_07965;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07965;pseudo=true JBYLIA010000002.1 Protein Homology CDS 174088 174836 . - 0 ID=cds-AC3ASX_07965;Parent=gene-AC3ASX_07965;Note=frameshifted;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014415.1;locus_tag=AC3ASX_07965;product=DMT family transporter;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 175063 176259 . + . ID=gene-AC3ASX_07970;Name=AC3ASX_07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07970 JBYLIA010000002.1 Protein Homology CDS 175063 176259 . + 0 ID=cds-MHV1765241.1;Parent=gene-AC3ASX_07970;Dbxref=NCBI_GP:MHV1765241.1;Name=MHV1765241.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550178.1;locus_tag=AC3ASX_07970;product=amino acid permease;protein_id=MHV1765241.1;transl_table=11 JBYLIA010000002.1 Genbank gene 176293 176649 . + . ID=gene-AC3ASX_07975;Name=AC3ASX_07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07975 JBYLIA010000002.1 Protein Homology CDS 176293 176649 . + 0 ID=cds-MHV1765242.1;Parent=gene-AC3ASX_07975;Dbxref=NCBI_GP:MHV1765242.1;Name=MHV1765242.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022385.1;locus_tag=AC3ASX_07975;product=hypothetical protein;protein_id=MHV1765242.1;transl_table=11 JBYLIA010000002.1 Genbank gene 176657 176999 . + . ID=gene-AC3ASX_07980;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=AC3ASX_07980 JBYLIA010000002.1 cmsearch RNase_P_RNA 176657 176999 . + . ID=rna-AC3ASX_07980;Parent=gene-AC3ASX_07980;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_07980;product=RNase P RNA component class A JBYLIA010000002.1 cmsearch exon 176657 176999 . + . ID=exon-AC3ASX_07980-1;Parent=rna-AC3ASX_07980;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_07980;product=RNase P RNA component class A JBYLIA010000002.1 Genbank gene 177022 178956 . + . ID=gene-AC3ASX_07985;Name=AC3ASX_07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_07985 JBYLIA010000002.1 Protein Homology CDS 177022 178956 . + 0 ID=cds-MHV1765243.1;Parent=gene-AC3ASX_07985;Dbxref=NCBI_GP:MHV1765243.1;Name=MHV1765243.1;Ontology_term=GO:0015970,GO:0008728,GO:0008893;gbkey=CDS;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate biosynthetic process|0015970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025932.1;locus_tag=AC3ASX_07985;product=RelA/SpoT family protein;protein_id=MHV1765243.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 179078 179714 . - . ID=gene-AC3ASX_07990;Name=AC3ASX_07990;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07990;pseudo=true JBYLIA010000002.1 Protein Homology CDS 179078 179714 . - 0 ID=cds-AC3ASX_07990;Parent=gene-AC3ASX_07990;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014425.1;locus_tag=AC3ASX_07990;product=DUF4124 domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 179792 180379 . - . ID=gene-AC3ASX_07995;Name=AC3ASX_07995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_07995;pseudo=true JBYLIA010000002.1 Protein Homology CDS 179792 180379 . - 0 ID=cds-AC3ASX_07995;Parent=gene-AC3ASX_07995;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037488.1;locus_tag=AC3ASX_07995;product=DUF4124 domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 180394 180960 . + . ID=gene-AC3ASX_08000;Name=AC3ASX_08000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08000;pseudo=true JBYLIA010000002.1 Protein Homology CDS 180394 180960 . + 0 ID=cds-AC3ASX_08000;Parent=gene-AC3ASX_08000;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014431.1;locus_tag=AC3ASX_08000;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 180944 181681 . - . ID=gene-AC3ASX_08005;Name=AC3ASX_08005;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08005;pseudo=true JBYLIA010000002.1 Protein Homology CDS 180944 181681 . - 0 ID=cds-AC3ASX_08005;Parent=gene-AC3ASX_08005;Note=frameshifted%3B internal stop;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034917.1;locus_tag=AC3ASX_08005;product=class I SAM-dependent methyltransferase;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 181681 182559 . - . ID=gene-AC3ASX_08010;Name=AC3ASX_08010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08010 JBYLIA010000002.1 Protein Homology CDS 181681 182559 . - 0 ID=cds-MHV1765244.1;Parent=gene-AC3ASX_08010;Dbxref=NCBI_GP:MHV1765244.1;Name=MHV1765244.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550173.1;locus_tag=AC3ASX_08010;product=tyrosine-type recombinase/integrase;protein_id=MHV1765244.1;transl_table=11 JBYLIA010000002.1 Genbank gene 182569 183786 . - . ID=gene-AC3ASX_08015;Name=AC3ASX_08015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08015 JBYLIA010000002.1 Protein Homology CDS 182569 183786 . - 0 ID=cds-MHV1765245.1;Parent=gene-AC3ASX_08015;Dbxref=NCBI_GP:MHV1765245.1;Name=MHV1765245.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287144.1;locus_tag=AC3ASX_08015;product=amino acid permease;protein_id=MHV1765245.1;transl_table=11 JBYLIA010000002.1 Genbank gene 183803 184252 . - . ID=gene-AC3ASX_08020;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=AC3ASX_08020 JBYLIA010000002.1 Protein Homology CDS 183803 184252 . - 0 ID=cds-MHV1765246.1;Parent=gene-AC3ASX_08020;Dbxref=NCBI_GP:MHV1765246.1;Name=MHV1765246.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714746.1;locus_tag=AC3ASX_08020;product=protein-export chaperone SecB;protein_id=MHV1765246.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 184331 186866 . - . ID=gene-AC3ASX_08025;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=pseudogene;locus_tag=AC3ASX_08025;pseudo=true JBYLIA010000002.1 Protein Homology CDS 184331 186866 . - 0 ID=cds-AC3ASX_08025;Parent=gene-AC3ASX_08025;Note=frameshifted;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550171.1;locus_tag=AC3ASX_08025;product=DNA mismatch repair protein MutS;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 187035 187982 . + . ID=gene-AC3ASX_08030;Name=AC3ASX_08030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08030 JBYLIA010000002.1 Protein Homology CDS 187035 187982 . + 0 ID=cds-MHV1765247.1;Parent=gene-AC3ASX_08030;Dbxref=NCBI_GP:MHV1765247.1;Name=MHV1765247.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550170.1;locus_tag=AC3ASX_08030;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=MHV1765247.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 188012 188516 . + . ID=gene-AC3ASX_08035;Name=AC3ASX_08035;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08035;pseudo=true JBYLIA010000002.1 Protein Homology CDS 188012 188516 . + 0 ID=cds-AC3ASX_08035;Parent=gene-AC3ASX_08035;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037480.1;locus_tag=AC3ASX_08035;product=pilus assembly protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 188497 189510 . + . ID=gene-AC3ASX_08040;Name=AC3ASX_08040;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08040;pseudo=true JBYLIA010000002.1 Protein Homology CDS 188497 189510 . + 0 ID=cds-AC3ASX_08040;Parent=gene-AC3ASX_08040;Note=internal stop;Ontology_term=GO:0043683,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=type IV pilus assembly|0043683||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429220.1;locus_tag=AC3ASX_08040;product=PilW family protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 189519 191474 . + . ID=gene-AC3ASX_08045;Name=AC3ASX_08045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08045;pseudo=true JBYLIA010000002.1 Protein Homology CDS 189519 191474 . + 0 ID=cds-AC3ASX_08045;Parent=gene-AC3ASX_08045;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022361.1;locus_tag=AC3ASX_08045;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 191471 192361 . + . ID=gene-AC3ASX_08050;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=AC3ASX_08050 JBYLIA010000002.1 Protein Homology CDS 191471 192361 . + 0 ID=cds-MHV1765248.1;Parent=gene-AC3ASX_08050;Dbxref=NCBI_GP:MHV1765248.1;Name=MHV1765248.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022359.1;locus_tag=AC3ASX_08050;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=MHV1765248.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 192358 192753 . + . ID=gene-AC3ASX_08055;Name=AC3ASX_08055;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08055;pseudo=true JBYLIA010000002.1 Protein Homology CDS 192358 192753 . + 0 ID=cds-AC3ASX_08055;Parent=gene-AC3ASX_08055;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011733718.1;locus_tag=AC3ASX_08055;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 192805 193026 . - . ID=gene-AC3ASX_08060;Name=AC3ASX_08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08060 JBYLIA010000002.1 Protein Homology CDS 192805 193026 . - 0 ID=cds-MHV1765249.1;Parent=gene-AC3ASX_08060;Dbxref=NCBI_GP:MHV1765249.1;Name=MHV1765249.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012698.7;locus_tag=AC3ASX_08060;product=helix-turn-helix domain-containing protein;protein_id=MHV1765249.1;transl_table=11 JBYLIA010000002.1 Genbank gene 193143 193316 . - . ID=gene-AC3ASX_08065;Name=AC3ASX_08065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08065 JBYLIA010000002.1 Protein Homology CDS 193143 193316 . - 0 ID=cds-MHV1765250.1;Parent=gene-AC3ASX_08065;Dbxref=NCBI_GP:MHV1765250.1;Name=MHV1765250.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: protein motif:HMM:NF012301.7;locus_tag=AC3ASX_08065;product=response regulator;protein_id=MHV1765250.1;transl_table=11 JBYLIA010000002.1 Genbank gene 193252 193467 . - . ID=gene-AC3ASX_08070;Name=AC3ASX_08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08070 JBYLIA010000002.1 GeneMarkS-2+ CDS 193252 193467 . - 0 ID=cds-MHV1765251.1;Parent=gene-AC3ASX_08070;Dbxref=NCBI_GP:MHV1765251.1;Name=MHV1765251.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_08070;product=hypothetical protein;protein_id=MHV1765251.1;transl_table=11 JBYLIA010000002.1 Genbank gene 194044 194355 . - . ID=gene-AC3ASX_08075;Name=AC3ASX_08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08075 JBYLIA010000002.1 GeneMarkS-2+ CDS 194044 194355 . - 0 ID=cds-MHV1765252.1;Parent=gene-AC3ASX_08075;Dbxref=NCBI_GP:MHV1765252.1;Name=MHV1765252.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_08075;product=hypothetical protein;protein_id=MHV1765252.1;transl_table=11 JBYLIA010000002.1 Genbank gene 194392 194502 . - . ID=gene-AC3ASX_08080;Name=AC3ASX_08080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08080 JBYLIA010000002.1 Protein Homology CDS 194392 194502 . - 0 ID=cds-MHV1765253.1;Parent=gene-AC3ASX_08080;Dbxref=NCBI_GP:MHV1765253.1;Name=MHV1765253.1;Ontology_term=GO:0006629;gbkey=CDS;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: protein motif:HMM:NF013890.7;locus_tag=AC3ASX_08080;product=lipase family protein;protein_id=MHV1765253.1;transl_table=11 JBYLIA010000002.1 Genbank gene 194502 194633 . - . ID=gene-AC3ASX_08085;Name=AC3ASX_08085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08085 JBYLIA010000002.1 GeneMarkS-2+ CDS 194502 194633 . - 0 ID=cds-MHV1765254.1;Parent=gene-AC3ASX_08085;Dbxref=NCBI_GP:MHV1765254.1;Name=MHV1765254.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_08085;product=hypothetical protein;protein_id=MHV1765254.1;transl_table=11 JBYLIA010000002.1 Genbank gene 196546 197838 . - . ID=gene-AC3ASX_08090;Name=AC3ASX_08090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08090 JBYLIA010000002.1 Protein Homology CDS 196546 197838 . - 0 ID=cds-MHV1765255.1;Parent=gene-AC3ASX_08090;Dbxref=NCBI_GP:MHV1765255.1;Name=MHV1765255.1;Ontology_term=GO:0006812,GO:1902600,GO:0015078,GO:0015297,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=proton transmembrane transporter activity|0015078||IEA,antiporter activity|0015297||IEA;go_process=monoatomic cation transport|0006812||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018346.1;locus_tag=AC3ASX_08090;product=cation:proton antiporter;protein_id=MHV1765255.1;transl_table=11 JBYLIA010000002.1 Genbank gene 197848 198570 . - . ID=gene-AC3ASX_08095;Name=AC3ASX_08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08095 JBYLIA010000002.1 Protein Homology CDS 197848 198570 . - 0 ID=cds-MHV1765256.1;Parent=gene-AC3ASX_08095;Dbxref=NCBI_GP:MHV1765256.1;Name=MHV1765256.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550164.1;locus_tag=AC3ASX_08095;product=hypothetical protein;protein_id=MHV1765256.1;transl_table=11 JBYLIA010000002.1 Genbank gene 198572 199576 . - . ID=gene-AC3ASX_08100;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=AC3ASX_08100 JBYLIA010000002.1 Protein Homology CDS 198572 199576 . - 0 ID=cds-MHV1765257.1;Parent=gene-AC3ASX_08100;Dbxref=NCBI_GP:MHV1765257.1;Name=MHV1765257.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339150.1;locus_tag=AC3ASX_08100;product=tryptophan--tRNA ligase;protein_id=MHV1765257.1;transl_table=11 JBYLIA010000002.1 Genbank gene 199675 199749 . - . ID=gene-AC3ASX_08105;Name=AC3ASX_08105;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_08105 JBYLIA010000002.1 tRNAscan-SE tRNA 199675 199749 . - . ID=rna-AC3ASX_08105;Parent=gene-AC3ASX_08105;anticodon=(pos:complement(199715..199717));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_08105;product=tRNA-Gly JBYLIA010000002.1 tRNAscan-SE exon 199675 199749 . - . ID=exon-AC3ASX_08105-1;Parent=rna-AC3ASX_08105;anticodon=(pos:complement(199715..199717));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_08105;product=tRNA-Gly JBYLIA010000002.1 Genbank gene 199764 199840 . - . ID=gene-AC3ASX_08110;Name=AC3ASX_08110;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_08110 JBYLIA010000002.1 tRNAscan-SE tRNA 199764 199840 . - . ID=rna-AC3ASX_08110;Parent=gene-AC3ASX_08110;anticodon=(pos:complement(199804..199806));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_08110;product=tRNA-Arg JBYLIA010000002.1 tRNAscan-SE exon 199764 199840 . - . ID=exon-AC3ASX_08110-1;Parent=rna-AC3ASX_08110;anticodon=(pos:complement(199804..199806));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_08110;product=tRNA-Arg JBYLIA010000002.1 Genbank gene 199871 200485 . - . ID=gene-AC3ASX_08115;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=AC3ASX_08115 JBYLIA010000002.1 Protein Homology CDS 199871 200485 . - 0 ID=cds-MHV1765258.1;Parent=gene-AC3ASX_08115;Dbxref=NCBI_GP:MHV1765258.1;Name=MHV1765258.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037466.1;locus_tag=AC3ASX_08115;product=dephospho-CoA kinase;protein_id=MHV1765258.1;transl_table=11 JBYLIA010000002.1 Genbank gene 200617 201759 . + . ID=gene-AC3ASX_08120;Name=AC3ASX_08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08120 JBYLIA010000002.1 Protein Homology CDS 200617 201759 . + 0 ID=cds-MHV1765259.1;Parent=gene-AC3ASX_08120;Dbxref=NCBI_GP:MHV1765259.1;Name=MHV1765259.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022345.1;locus_tag=AC3ASX_08120;product=class I SAM-dependent methyltransferase;protein_id=MHV1765259.1;transl_table=11 JBYLIA010000002.1 Genbank gene 202169 204850 . + . ID=gene-AC3ASX_08125;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=AC3ASX_08125 JBYLIA010000002.1 Protein Homology CDS 202169 204850 . + 0 ID=cds-MHV1765260.1;Parent=gene-AC3ASX_08125;Dbxref=NCBI_GP:MHV1765260.1;Name=MHV1765260.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014486.1;locus_tag=AC3ASX_08125;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=MHV1765260.1;transl_table=11 JBYLIA010000002.1 Genbank gene 204869 206392 . + . ID=gene-AC3ASX_08130;Name=AC3ASX_08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08130 JBYLIA010000002.1 Protein Homology CDS 204869 206392 . + 0 ID=cds-MHV1765261.1;Parent=gene-AC3ASX_08130;Dbxref=NCBI_GP:MHV1765261.1;Name=MHV1765261.1;Ontology_term=GO:0006086,GO:0004742,GO:0031405,GO:0045254;gbkey=CDS;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA,lipoic acid binding|0031405||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011648578.1;locus_tag=AC3ASX_08130;product=dihydrolipoyllysine-residue acetyltransferase;protein_id=MHV1765261.1;transl_table=11 JBYLIA010000002.1 Genbank gene 206407 207816 . + . ID=gene-AC3ASX_08135;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=AC3ASX_08135 JBYLIA010000002.1 Protein Homology CDS 206407 207816 . + 0 ID=cds-MHV1765262.1;Parent=gene-AC3ASX_08135;Dbxref=NCBI_GP:MHV1765262.1;Name=MHV1765262.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548837.1;locus_tag=AC3ASX_08135;product=dihydrolipoyl dehydrogenase;protein_id=MHV1765262.1;transl_table=11 JBYLIA010000002.1 Genbank gene 207986 208648 . + . ID=gene-AC3ASX_08140;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=AC3ASX_08140 JBYLIA010000002.1 Protein Homology CDS 207986 208648 . + 0 ID=cds-MHV1765263.1;Parent=gene-AC3ASX_08140;Dbxref=NCBI_GP:MHV1765263.1;Name=MHV1765263.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550160.1;locus_tag=AC3ASX_08140;product=uracil-DNA glycosylase;protein_id=MHV1765263.1;transl_table=11 JBYLIA010000002.1 Genbank gene 208683 208790 . - . ID=gene-AC3ASX_08145;Name=AC3ASX_08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08145 JBYLIA010000002.1 Protein Homology CDS 208683 208790 . - 0 ID=cds-MHV1765264.1;Parent=gene-AC3ASX_08145;Dbxref=NCBI_GP:MHV1765264.1;Name=MHV1765264.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014853.7;locus_tag=AC3ASX_08145;product=hypothetical protein;protein_id=MHV1765264.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 209795 210313 . - . ID=gene-AC3ASX_08150;Name=AC3ASX_08150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08150;pseudo=true JBYLIA010000002.1 Protein Homology CDS 209795 210313 . - 0 ID=cds-AC3ASX_08150;Parent=gene-AC3ASX_08150;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022484.1;locus_tag=AC3ASX_08150;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 210604 213192 . + . ID=gene-AC3ASX_08155;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=AC3ASX_08155 JBYLIA010000002.1 Protein Homology CDS 210604 213192 . + 0 ID=cds-MHV1765265.1;Parent=gene-AC3ASX_08155;Dbxref=NCBI_GP:MHV1765265.1;Name=MHV1765265.1;Ontology_term=GO:0006259,GO:0006265,GO:0003677,GO:0003916,GO:0003918,GO:0005524;gbkey=CDS;gene=gyrA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA metabolic process|0006259||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429182.1;locus_tag=AC3ASX_08155;product=DNA gyrase subunit A;protein_id=MHV1765265.1;transl_table=11 JBYLIA010000002.1 Genbank gene 213198 214355 . + . ID=gene-AC3ASX_08160;Name=dxr;gbkey=Gene;gene=dxr;gene_biotype=protein_coding;locus_tag=AC3ASX_08160 JBYLIA010000002.1 Protein Homology CDS 213198 214355 . + 0 ID=cds-MHV1765266.1;Parent=gene-AC3ASX_08160;Dbxref=NCBI_GP:MHV1765266.1;Name=MHV1765266.1;Ontology_term=GO:0008299,GO:0019288,GO:0030604,GO:0046872,GO:0005737;gbkey=CDS;gene=dxr;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018074.1;locus_tag=AC3ASX_08160;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=MHV1765266.1;transl_table=11 JBYLIA010000002.1 Genbank gene 214342 216738 . + . ID=gene-AC3ASX_08165;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=AC3ASX_08165 JBYLIA010000002.1 Protein Homology CDS 214342 216738 . + 0 ID=cds-MHV1765267.1;Parent=gene-AC3ASX_08165;Dbxref=NCBI_GP:MHV1765267.1;Name=MHV1765267.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022480.1;locus_tag=AC3ASX_08165;product=outer membrane protein assembly factor BamA;protein_id=MHV1765267.1;transl_table=11 JBYLIA010000002.1 Genbank gene 216875 217378 . + . ID=gene-AC3ASX_08170;Name=AC3ASX_08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08170 JBYLIA010000002.1 Protein Homology CDS 216875 217378 . + 0 ID=cds-MHV1765268.1;Parent=gene-AC3ASX_08170;Dbxref=NCBI_GP:MHV1765268.1;Name=MHV1765268.1;Ontology_term=GO:0006457,GO:0051082,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014855.1;locus_tag=AC3ASX_08170;product=OmpH/Skp family outer membrane protein;protein_id=MHV1765268.1;transl_table=11 JBYLIA010000002.1 Genbank gene 217397 218410 . + . ID=gene-AC3ASX_08175;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=AC3ASX_08175 JBYLIA010000002.1 Protein Homology CDS 217397 218410 . + 0 ID=cds-MHV1765269.1;Parent=gene-AC3ASX_08175;Dbxref=NCBI_GP:MHV1765269.1;Name=MHV1765269.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550157.1;locus_tag=AC3ASX_08175;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=MHV1765269.1;transl_table=11 JBYLIA010000002.1 Genbank gene 218425 218916 . + . ID=gene-AC3ASX_08180;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=AC3ASX_08180 JBYLIA010000002.1 Protein Homology CDS 218425 218916 . + 0 ID=cds-MHV1765270.1;Parent=gene-AC3ASX_08180;Dbxref=NCBI_GP:MHV1765270.1;Name=MHV1765270.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922562.1;locus_tag=AC3ASX_08180;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=MHV1765270.1;transl_table=11 JBYLIA010000002.1 Genbank gene 218919 219698 . + . ID=gene-AC3ASX_08185;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=AC3ASX_08185 JBYLIA010000002.1 Protein Homology CDS 218919 219698 . + 0 ID=cds-MHV1765271.1;Parent=gene-AC3ASX_08185;Dbxref=NCBI_GP:MHV1765271.1;Name=MHV1765271.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714773.1;locus_tag=AC3ASX_08185;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=MHV1765271.1;transl_table=11 JBYLIA010000002.1 Genbank gene 219698 220840 . + . ID=gene-AC3ASX_08190;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=AC3ASX_08190 JBYLIA010000002.1 Protein Homology CDS 219698 220840 . + 0 ID=cds-MHV1765272.1;Parent=gene-AC3ASX_08190;Dbxref=NCBI_GP:MHV1765272.1;Name=MHV1765272.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550156.1;locus_tag=AC3ASX_08190;product=lipid-A-disaccharide synthase;protein_id=MHV1765272.1;transl_table=11 JBYLIA010000002.1 Genbank gene 220900 221487 . + . ID=gene-AC3ASX_08195;Name=AC3ASX_08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08195 JBYLIA010000002.1 Protein Homology CDS 220900 221487 . + 0 ID=cds-MHV1765273.1;Parent=gene-AC3ASX_08195;Dbxref=NCBI_GP:MHV1765273.1;Name=MHV1765273.1;Ontology_term=GO:0090529;gbkey=CDS;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018080.1;locus_tag=AC3ASX_08195;product=cell division protein ZipA C-terminal FtsZ-binding domain-containing protein;protein_id=MHV1765273.1;transl_table=11 JBYLIA010000002.1 Genbank gene 221884 222129 . - . ID=gene-AC3ASX_08200;Name=AC3ASX_08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08200 JBYLIA010000002.1 GeneMarkS-2+ CDS 221884 222129 . - 0 ID=cds-MHV1765274.1;Parent=gene-AC3ASX_08200;Dbxref=NCBI_GP:MHV1765274.1;Name=MHV1765274.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_08200;product=hypothetical protein;protein_id=MHV1765274.1;transl_table=11 JBYLIA010000002.1 Genbank gene 222092 222331 . - . ID=gene-AC3ASX_08205;Name=AC3ASX_08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08205 JBYLIA010000002.1 Protein Homology CDS 222092 222331 . - 0 ID=cds-MHV1765275.1;Parent=gene-AC3ASX_08205;Dbxref=NCBI_GP:MHV1765275.1;Name=MHV1765275.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF012354.7;locus_tag=AC3ASX_08205;product=helix-turn-helix domain-containing protein;protein_id=MHV1765275.1;transl_table=11 JBYLIA010000002.1 Genbank gene 223422 223498 . - . ID=gene-AC3ASX_08210;Name=AC3ASX_08210;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_08210 JBYLIA010000002.1 tRNAscan-SE tRNA 223422 223498 . - . ID=rna-AC3ASX_08210;Parent=gene-AC3ASX_08210;anticodon=(pos:complement(223462..223464));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_08210;product=tRNA-Ile JBYLIA010000002.1 tRNAscan-SE exon 223422 223498 . - . ID=exon-AC3ASX_08210-1;Parent=rna-AC3ASX_08210;anticodon=(pos:complement(223462..223464));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_08210;product=tRNA-Ile JBYLIA010000002.1 Genbank pseudogene 223564 224371 . - . ID=gene-AC3ASX_08215;Name=ppk2;gbkey=Gene;gene=ppk2;gene_biotype=pseudogene;locus_tag=AC3ASX_08215;pseudo=true JBYLIA010000002.1 Protein Homology CDS 223564 224371 . - 0 ID=cds-AC3ASX_08215;Parent=gene-AC3ASX_08215;Note=frameshifted;Ontology_term=GO:0006793,GO:0008976;gbkey=CDS;gene=ppk2;go_function=polyphosphate kinase activity|0008976||IEA;go_process=phosphorus metabolic process|0006793||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714780.1;locus_tag=AC3ASX_08215;product=polyphosphate kinase 2;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 224442 225200 . - . ID=gene-AC3ASX_08220;Name=AC3ASX_08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08220 JBYLIA010000002.1 Protein Homology CDS 224442 225200 . - 0 ID=cds-MHV1765276.1;Parent=gene-AC3ASX_08220;Dbxref=NCBI_GP:MHV1765276.1;Name=MHV1765276.1;Ontology_term=GO:0008654,GO:0016780;gbkey=CDS;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922566.1;locus_tag=AC3ASX_08220;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=MHV1765276.1;transl_table=11 JBYLIA010000002.1 Genbank gene 225247 226128 . - . ID=gene-AC3ASX_08225;Name=AC3ASX_08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08225 JBYLIA010000002.1 Protein Homology CDS 225247 226128 . - 0 ID=cds-MHV1765277.1;Parent=gene-AC3ASX_08225;Dbxref=NCBI_GP:MHV1765277.1;Name=MHV1765277.1;Ontology_term=GO:0008299,GO:0004659,GO:0046872;gbkey=CDS;go_function=prenyltransferase activity|0004659||IEA,metal ion binding|0046872||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014898.1;locus_tag=AC3ASX_08225;product=polyprenyl synthetase family protein;protein_id=MHV1765277.1;transl_table=11 JBYLIA010000002.1 Genbank gene 226125 227420 . - . ID=gene-AC3ASX_08230;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=AC3ASX_08230 JBYLIA010000002.1 Protein Homology CDS 226125 227420 . - 0 ID=cds-MHV1765278.1;Parent=gene-AC3ASX_08230;Dbxref=NCBI_GP:MHV1765278.1;Name=MHV1765278.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022463.1;locus_tag=AC3ASX_08230;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=MHV1765278.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 227526 228107 . - . ID=gene-AC3ASX_08235;Name=rdgB;gbkey=Gene;gene=rdgB;gene_biotype=pseudogene;locus_tag=AC3ASX_08235;pseudo=true JBYLIA010000002.1 Protein Homology CDS 227526 228107 . - 0 ID=cds-AC3ASX_08235;Parent=gene-AC3ASX_08235;Note=internal stop;Ontology_term=GO:0006281,GO:0035870,GO:0036222;gbkey=CDS;gene=rdgB;go_function=dITP diphosphatase activity|0035870||IEA,XTP diphosphatase activity|0036222||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022461.1;locus_tag=AC3ASX_08235;product=RdgB/HAM1 family non-canonical purine NTP pyrophosphatase;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 228214 229035 . + . ID=gene-AC3ASX_08240;Name=proC;gbkey=Gene;gene=proC;gene_biotype=pseudogene;locus_tag=AC3ASX_08240;pseudo=true JBYLIA010000002.1 Protein Homology CDS 228214 229035 . + 0 ID=cds-AC3ASX_08240;Parent=gene-AC3ASX_08240;Note=frameshifted%3B internal stop;Ontology_term=GO:0055129,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714784.1;locus_tag=AC3ASX_08240;product=pyrroline-5-carboxylate reductase;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 229175 229861 . + . ID=gene-AC3ASX_08245;Name=qseB;gbkey=Gene;gene=qseB;gene_biotype=protein_coding;locus_tag=AC3ASX_08245 JBYLIA010000002.1 Protein Homology CDS 229175 229861 . + 0 ID=cds-MHV1765279.1;Parent=gene-AC3ASX_08245;Dbxref=NCBI_GP:MHV1765279.1;Name=MHV1765279.1;gbkey=CDS;gene=qseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018097.1;locus_tag=AC3ASX_08245;product=response regulator QseB;protein_id=MHV1765279.1;transl_table=11 JBYLIA010000002.1 Genbank gene 229866 230729 . + . ID=gene-AC3ASX_08250;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=AC3ASX_08250 JBYLIA010000002.1 Protein Homology CDS 229866 230729 . + 0 ID=cds-MHV1765280.1;Parent=gene-AC3ASX_08250;Dbxref=NCBI_GP:MHV1765280.1;Name=MHV1765280.1;Ontology_term=GO:0009306,GO:0051604,GO:0004252,GO:0016020;gbkey=CDS;gene=lepB;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=protein secretion|0009306||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339179.1;locus_tag=AC3ASX_08250;product=signal peptidase I;protein_id=MHV1765280.1;transl_table=11 JBYLIA010000002.1 Genbank gene 230736 231428 . + . ID=gene-AC3ASX_08255;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=AC3ASX_08255 JBYLIA010000002.1 Protein Homology CDS 230736 231428 . + 0 ID=cds-MHV1765281.1;Parent=gene-AC3ASX_08255;Dbxref=NCBI_GP:MHV1765281.1;Name=MHV1765281.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886486.1;locus_tag=AC3ASX_08255;product=ribonuclease III;protein_id=MHV1765281.1;transl_table=11 JBYLIA010000002.1 Genbank gene 231415 232323 . + . ID=gene-AC3ASX_08260;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=AC3ASX_08260 JBYLIA010000002.1 Protein Homology CDS 231415 232323 . + 0 ID=cds-MHV1765282.1;Parent=gene-AC3ASX_08260;Dbxref=NCBI_GP:MHV1765282.1;Name=MHV1765282.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280586.1;locus_tag=AC3ASX_08260;product=tRNA pseudouridine(55) synthase TruB;protein_id=MHV1765282.1;transl_table=11 JBYLIA010000002.1 Genbank gene 232316 234601 . + . ID=gene-AC3ASX_08265;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=AC3ASX_08265 JBYLIA010000002.1 Protein Homology CDS 232316 234601 . + 0 ID=cds-MHV1765283.1;Parent=gene-AC3ASX_08265;Dbxref=NCBI_GP:MHV1765283.1;Name=MHV1765283.1;Ontology_term=GO:0003723,GO:0004518;gbkey=CDS;gene=rnr;go_function=RNA binding|0003723||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339182.1;locus_tag=AC3ASX_08265;product=ribonuclease R;protein_id=MHV1765283.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 234584 235431 . - . ID=gene-AC3ASX_08270;Name=AC3ASX_08270;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08270;pseudo=true JBYLIA010000002.1 Protein Homology CDS 234584 235431 . - 0 ID=cds-AC3ASX_08270;Parent=gene-AC3ASX_08270;Note=frameshifted%3B internal stop;Ontology_term=GO:0006633,GO:0006636,GO:0016717,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on paired donors%2C with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water|0016717||IEA,metal ion binding|0046872||IEA;go_process=fatty acid biosynthetic process|0006633||IEA,unsaturated fatty acid biosynthetic process|0006636||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025104.1;locus_tag=AC3ASX_08270;product=acyl-CoA desaturase;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 235451 235578 . - . ID=gene-AC3ASX_08275;Name=AC3ASX_08275;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08275;pseudo=true JBYLIA010000002.1 Protein Homology CDS 235451 235578 . - 0 ID=cds-AC3ASX_08275;Parent=gene-AC3ASX_08275;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025107.1;locus_tag=AC3ASX_08275;product=SDR family NAD(P)-dependent oxidoreductase;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 235606 235794 . - . ID=gene-AC3ASX_08280;Name=AC3ASX_08280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08280;pseudo=true JBYLIA010000002.1 Protein Homology CDS 235606 235794 . - 0 ID=cds-AC3ASX_08280;Parent=gene-AC3ASX_08280;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018770.7;locus_tag=AC3ASX_08280;product=DUF1365 family protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 235900 236181 . - . ID=gene-AC3ASX_08285;Name=AC3ASX_08285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08285 JBYLIA010000002.1 GeneMarkS-2+ CDS 235900 236181 . - 0 ID=cds-MHV1765284.1;Parent=gene-AC3ASX_08285;Dbxref=NCBI_GP:MHV1765284.1;Name=MHV1765284.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_08285;product=hypothetical protein;protein_id=MHV1765284.1;transl_table=11 JBYLIA010000002.1 Genbank gene 236327 236470 . - . ID=gene-AC3ASX_08290;Name=AC3ASX_08290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08290 JBYLIA010000002.1 GeneMarkS-2+ CDS 236327 236470 . - 0 ID=cds-MHV1765285.1;Parent=gene-AC3ASX_08290;Dbxref=NCBI_GP:MHV1765285.1;Name=MHV1765285.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_08290;product=hypothetical protein;protein_id=MHV1765285.1;transl_table=11 JBYLIA010000002.1 Genbank gene 237120 238091 . - . ID=gene-AC3ASX_08295;Name=AC3ASX_08295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08295 JBYLIA010000002.1 Protein Homology CDS 237120 238091 . - 0 ID=cds-MHV1765286.1;Parent=gene-AC3ASX_08295;Dbxref=NCBI_GP:MHV1765286.1;Name=MHV1765286.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025142.1;locus_tag=AC3ASX_08295;product=sensor histidine kinase;protein_id=MHV1765286.1;transl_table=11 JBYLIA010000002.1 Genbank gene 238141 238830 . - . ID=gene-AC3ASX_08300;Name=bfpR;gbkey=Gene;gene=bfpR;gene_biotype=protein_coding;locus_tag=AC3ASX_08300 JBYLIA010000002.1 Protein Homology CDS 238141 238830 . - 0 ID=cds-MHV1765287.1;Parent=gene-AC3ASX_08300;Dbxref=NCBI_GP:MHV1765287.1;Name=MHV1765287.1;gbkey=CDS;gene=bfpR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022431.1;locus_tag=AC3ASX_08300;product=two-component system response regulator BfpR;protein_id=MHV1765287.1;transl_table=11 JBYLIA010000002.1 Genbank gene 238972 239508 . + . ID=gene-AC3ASX_08305;Name=AC3ASX_08305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08305 JBYLIA010000002.1 Protein Homology CDS 238972 239508 . + 0 ID=cds-MHV1765288.1;Parent=gene-AC3ASX_08305;Dbxref=NCBI_GP:MHV1765288.1;Name=MHV1765288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550143.1;locus_tag=AC3ASX_08305;product=hypothetical protein;protein_id=MHV1765288.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 239636 239942 . + . ID=gene-AC3ASX_08310;Name=AC3ASX_08310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08310;pseudo=true JBYLIA010000002.1 Protein Homology CDS 239636 239942 . + 0 ID=cds-AC3ASX_08310;Parent=gene-AC3ASX_08310;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037404.1;locus_tag=AC3ASX_08310;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 240305 240897 . + . ID=gene-AC3ASX_08315;Name=lpoB;gbkey=Gene;gene=lpoB;gene_biotype=pseudogene;locus_tag=AC3ASX_08315;pseudo=true JBYLIA010000002.1 Protein Homology CDS 240305 240897 . + 0 ID=cds-AC3ASX_08315;Parent=gene-AC3ASX_08315;Note=frameshifted;gbkey=CDS;gene=lpoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550141.1;locus_tag=AC3ASX_08315;product=penicillin-binding protein activator LpoB;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 240965 242383 . + . ID=gene-AC3ASX_08320;Name=AC3ASX_08320;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08320;pseudo=true JBYLIA010000002.1 Protein Homology CDS 240965 242383 . + 0 ID=cds-AC3ASX_08320;Parent=gene-AC3ASX_08320;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014935.1;locus_tag=AC3ASX_08320;product=DUF6844 domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 242373 243381 . + . ID=gene-AC3ASX_08325;Name=AC3ASX_08325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08325;pseudo=true JBYLIA010000002.1 Protein Homology CDS 242373 243381 . + 0 ID=cds-AC3ASX_08325;Parent=gene-AC3ASX_08325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018114.1;locus_tag=AC3ASX_08325;product=penicillin-binding protein activator LpoB;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 243386 244788 . + . ID=gene-AC3ASX_08330;Name=AC3ASX_08330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08330;pseudo=true JBYLIA010000002.1 Protein Homology CDS 243386 244788 . + 0 ID=cds-AC3ASX_08330;Parent=gene-AC3ASX_08330;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014941.1;locus_tag=AC3ASX_08330;product=COG3014 family protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 246639 246806 . + . ID=gene-AC3ASX_08335;Name=AC3ASX_08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08335 JBYLIA010000002.1 GeneMarkS-2+ CDS 246639 246806 . + 0 ID=cds-MHV1765289.1;Parent=gene-AC3ASX_08335;Dbxref=NCBI_GP:MHV1765289.1;Name=MHV1765289.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_08335;product=hypothetical protein;protein_id=MHV1765289.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 246948 247268 . + . ID=gene-AC3ASX_08340;Name=AC3ASX_08340;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08340;pseudo=true JBYLIA010000002.1 Protein Homology CDS 246948 247268 . + 0 ID=cds-AC3ASX_08340;Parent=gene-AC3ASX_08340;Note=internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025156.1;locus_tag=AC3ASX_08340;product=arginine deiminase-related protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 247655 247933 . + . ID=gene-AC3ASX_08345;Name=AC3ASX_08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08345 JBYLIA010000002.1 Protein Homology CDS 247655 247933 . + 0 ID=cds-MHV1765290.1;Parent=gene-AC3ASX_08345;Dbxref=NCBI_GP:MHV1765290.1;Name=MHV1765290.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014476.7;locus_tag=AC3ASX_08345;product=hypothetical protein;protein_id=MHV1765290.1;transl_table=11 JBYLIA010000002.1 Genbank gene 248181 248342 . + . ID=gene-AC3ASX_08350;Name=AC3ASX_08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08350 JBYLIA010000002.1 GeneMarkS-2+ CDS 248181 248342 . + 0 ID=cds-MHV1765291.1;Parent=gene-AC3ASX_08350;Dbxref=NCBI_GP:MHV1765291.1;Name=MHV1765291.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_08350;product=hypothetical protein;protein_id=MHV1765291.1;transl_table=11 JBYLIA010000002.1 Genbank gene 248555 249970 . + . ID=gene-AC3ASX_08355;Name=AC3ASX_08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08355 JBYLIA010000002.1 Protein Homology CDS 248555 249970 . + 0 ID=cds-MHV1765292.1;Parent=gene-AC3ASX_08355;Dbxref=NCBI_GP:MHV1765292.1;Name=MHV1765292.1;Ontology_term=GO:0009435,GO:0004514;gbkey=CDS;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037383.1;locus_tag=AC3ASX_08355;product=nicotinate phosphoribosyltransferase;protein_id=MHV1765292.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 250052 250288 . + . ID=gene-AC3ASX_08360;Name=AC3ASX_08360;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08360;pseudo=true JBYLIA010000002.1 Protein Homology CDS 250052 250288 . + 0 ID=cds-AC3ASX_08360;Parent=gene-AC3ASX_08360;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034763.1;locus_tag=AC3ASX_08360;product=HP1242/YdcH family protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 250419 251133 . + . ID=gene-AC3ASX_08365;Name=AC3ASX_08365;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08365;pseudo=true JBYLIA010000002.1 Protein Homology CDS 250419 251133 . + 0 ID=cds-AC3ASX_08365;Parent=gene-AC3ASX_08365;Note=frameshifted%3B internal stop;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550136.1;locus_tag=AC3ASX_08365;product=MFS transporter;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 251126 251614 . - . ID=gene-AC3ASX_08370;Name=AC3ASX_08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08370 JBYLIA010000002.1 Protein Homology CDS 251126 251614 . - 0 ID=cds-MHV1765293.1;Parent=gene-AC3ASX_08370;Dbxref=NCBI_GP:MHV1765293.1;Name=MHV1765293.1;Ontology_term=GO:0016790,GO:0016836,GO:0047617;gbkey=CDS;go_function=thiolester hydrolase activity|0016790||IEA,hydro-lyase activity|0016836||IEA,fatty acyl-CoA hydrolase activity|0047617||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922597.1;locus_tag=AC3ASX_08370;product=PaaI family thioesterase;protein_id=MHV1765293.1;transl_table=11 JBYLIA010000002.1 Genbank gene 251703 252890 . - . ID=gene-AC3ASX_08375;Name=AC3ASX_08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08375 JBYLIA010000002.1 Protein Homology CDS 251703 252890 . - 0 ID=cds-MHV1765294.1;Parent=gene-AC3ASX_08375;Dbxref=NCBI_GP:MHV1765294.1;Name=MHV1765294.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280609.1;locus_tag=AC3ASX_08375;product=acetyl-CoA C-acyltransferase;protein_id=MHV1765294.1;transl_table=11 JBYLIA010000002.1 Genbank gene 252903 255596 . - . ID=gene-AC3ASX_08380;Name=AC3ASX_08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08380 JBYLIA010000002.1 Protein Homology CDS 252903 255596 . - 0 ID=cds-MHV1765295.1;Parent=gene-AC3ASX_08380;Dbxref=NCBI_GP:MHV1765295.1;Name=MHV1765295.1;Ontology_term=GO:0000062;gbkey=CDS;go_function=fatty-acyl-CoA binding|0000062||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018120.1;locus_tag=AC3ASX_08380;product=acyl-CoA-binding protein;protein_id=MHV1765295.1;transl_table=11 JBYLIA010000002.1 Genbank gene 255667 257907 . - . ID=gene-AC3ASX_08385;Name=AC3ASX_08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08385 JBYLIA010000002.1 Protein Homology CDS 255667 257907 . - 0 ID=cds-MHV1765296.1;Parent=gene-AC3ASX_08385;Dbxref=NCBI_GP:MHV1765296.1;Name=MHV1765296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025169.1;locus_tag=AC3ASX_08385;product=acyl-CoA dehydrogenase;protein_id=MHV1765296.1;transl_table=11 JBYLIA010000002.1 Genbank gene 257883 259529 . - . ID=gene-AC3ASX_08390;Name=AC3ASX_08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08390 JBYLIA010000002.1 Protein Homology CDS 257883 259529 . - 0 ID=cds-MHV1765297.1;Parent=gene-AC3ASX_08390;Dbxref=NCBI_GP:MHV1765297.1;Name=MHV1765297.1;Ontology_term=GO:0006631,GO:0004467,GO:0005524,GO:0120225;gbkey=CDS;go_function=long-chain fatty acid-CoA ligase activity|0004467||IEA,ATP binding|0005524||IEA,coenzyme A binding|0120225||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714805.1;locus_tag=AC3ASX_08390;product=long-chain-fatty-acid--CoA ligase;protein_id=MHV1765297.1;transl_table=11 JBYLIA010000002.1 Genbank gene 259748 260095 . + . ID=gene-AC3ASX_08395;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=AC3ASX_08395 JBYLIA010000002.1 Protein Homology CDS 259748 260095 . + 0 ID=cds-MHV1765298.1;Parent=gene-AC3ASX_08395;Dbxref=NCBI_GP:MHV1765298.1;Name=MHV1765298.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003014961.1;locus_tag=AC3ASX_08395;product=arsenate reductase (glutaredoxin);protein_id=MHV1765298.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 260145 262368 . + . ID=gene-AC3ASX_08400;Name=AC3ASX_08400;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08400;pseudo=true JBYLIA010000002.1 Protein Homology CDS 260145 262368 . + 0 ID=cds-AC3ASX_08400;Parent=gene-AC3ASX_08400;Note=frameshifted%3B internal stop;Ontology_term=GO:0006099,GO:0004450;gbkey=CDS;go_function=isocitrate dehydrogenase (NADP+) activity|0004450||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025176.1;locus_tag=AC3ASX_08400;product=NADP-dependent isocitrate dehydrogenase;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 262620 266419 . + . ID=gene-AC3ASX_08405;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=pseudogene;locus_tag=AC3ASX_08405;pseudo=true JBYLIA010000002.1 Protein Homology CDS 262620 266419 . + 0 ID=cds-AC3ASX_08405;Parent=gene-AC3ASX_08405;Note=frameshifted%3B internal stop;Ontology_term=GO:0003724;gbkey=CDS;gene=hrpA;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037358.1;locus_tag=AC3ASX_08405;product=ATP-dependent RNA helicase HrpA;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 266471 268210 . + . ID=gene-AC3ASX_08410;Name=AC3ASX_08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08410 JBYLIA010000002.1 Protein Homology CDS 266471 268210 . + 0 ID=cds-MHV1765299.1;Parent=gene-AC3ASX_08410;Dbxref=NCBI_GP:MHV1765299.1;Name=MHV1765299.1;Ontology_term=GO:0000271;gbkey=CDS;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287268.1;locus_tag=AC3ASX_08410;product=polysaccharide biosynthesis protein;protein_id=MHV1765299.1;transl_table=11 JBYLIA010000002.1 Genbank gene 269958 270290 . - . ID=gene-AC3ASX_08415;Name=AC3ASX_08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08415 JBYLIA010000002.1 Protein Homology CDS 269958 270290 . - 0 ID=cds-MHV1765300.1;Parent=gene-AC3ASX_08415;Dbxref=NCBI_GP:MHV1765300.1;Name=MHV1765300.1;Ontology_term=GO:0000271,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: protein motif:HMM:NF016060.8;locus_tag=AC3ASX_08415;product=GtrA family protein;protein_id=MHV1765300.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 270509 270871 . - . ID=gene-AC3ASX_08420;Name=AC3ASX_08420;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08420;pseudo=true JBYLIA010000002.1 Protein Homology CDS 270509 270871 . - 0 ID=cds-AC3ASX_08420;Parent=gene-AC3ASX_08420;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012745.7;locus_tag=AC3ASX_08420;product=glycosyltransferase;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 271093 271710 . + . ID=gene-AC3ASX_08425;Name=AC3ASX_08425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08425 JBYLIA010000002.1 Protein Homology CDS 271093 271710 . + 0 ID=cds-MHV1765301.1;Parent=gene-AC3ASX_08425;Dbxref=NCBI_GP:MHV1765301.1;Name=MHV1765301.1;Ontology_term=GO:0000271,GO:0016780,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025211.1;locus_tag=AC3ASX_08425;product=sugar transferase;protein_id=MHV1765301.1;transl_table=11 JBYLIA010000002.1 Genbank gene 271712 272497 . + . ID=gene-AC3ASX_08430;Name=AC3ASX_08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08430 JBYLIA010000002.1 Protein Homology CDS 271712 272497 . + 0 ID=cds-MHV1765302.1;Parent=gene-AC3ASX_08430;Dbxref=NCBI_GP:MHV1765302.1;Name=MHV1765302.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287270.1;locus_tag=AC3ASX_08430;product=NAD-dependent epimerase/dehydratase family protein;protein_id=MHV1765302.1;transl_table=11 JBYLIA010000002.1 Genbank gene 272603 273976 . + . ID=gene-AC3ASX_08435;Name=AC3ASX_08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08435 JBYLIA010000002.1 Protein Homology CDS 272603 273976 . + 0 ID=cds-MHV1765303.1;Parent=gene-AC3ASX_08435;Dbxref=NCBI_GP:MHV1765303.1;Name=MHV1765303.1;Ontology_term=GO:0000271,GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287271.1;locus_tag=AC3ASX_08435;product=mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase;protein_id=MHV1765303.1;transl_table=11 JBYLIA010000002.1 Genbank gene 274000 275139 . + . ID=gene-AC3ASX_08440;Name=gmd;gbkey=Gene;gene=gmd;gene_biotype=protein_coding;locus_tag=AC3ASX_08440 JBYLIA010000002.1 Protein Homology CDS 274000 275139 . + 0 ID=cds-MHV1765304.1;Parent=gene-AC3ASX_08440;Dbxref=NCBI_GP:MHV1765304.1;Name=MHV1765304.1;Ontology_term=GO:0000271,GO:0019673,GO:0008446;gbkey=CDS;gene=gmd;go_function=GDP-mannose 4%2C6-dehydratase activity|0008446||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,GDP-mannose metabolic process|0019673||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280620.1;locus_tag=AC3ASX_08440;product=GDP-mannose 4%2C6-dehydratase;protein_id=MHV1765304.1;transl_table=11 JBYLIA010000002.1 Genbank gene 275153 276202 . + . ID=gene-AC3ASX_08445;Name=AC3ASX_08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08445 JBYLIA010000002.1 Protein Homology CDS 275153 276202 . + 0 ID=cds-MHV1765305.1;Parent=gene-AC3ASX_08445;Dbxref=NCBI_GP:MHV1765305.1;Name=MHV1765305.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922611.1;locus_tag=AC3ASX_08445;product=GDP-L-fucose synthase family protein;protein_id=MHV1765305.1;transl_table=11 JBYLIA010000002.1 Genbank gene 276340 277230 . + . ID=gene-AC3ASX_08450;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=AC3ASX_08450 JBYLIA010000002.1 Protein Homology CDS 276340 277230 . + 0 ID=cds-MHV1765306.1;Parent=gene-AC3ASX_08450;Dbxref=NCBI_GP:MHV1765306.1;Name=MHV1765306.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287275.1;locus_tag=AC3ASX_08450;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=MHV1765306.1;transl_table=11 JBYLIA010000002.1 Genbank gene 277227 277799 . + . ID=gene-AC3ASX_08455;Name=rfbC;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=AC3ASX_08455 JBYLIA010000002.1 Protein Homology CDS 277227 277799 . + 0 ID=cds-MHV1765307.1;Parent=gene-AC3ASX_08455;Dbxref=NCBI_GP:MHV1765307.1;Name=MHV1765307.1;Ontology_term=GO:0019305,GO:0008830;gbkey=CDS;gene=rfbC;go_function=dTDP-4-dehydrorhamnose 3%2C5-epimerase activity|0008830||IEA;go_process=dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287276.1;locus_tag=AC3ASX_08455;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=MHV1765307.1;transl_table=11 JBYLIA010000002.1 Genbank gene 277894 278772 . + . ID=gene-AC3ASX_08460;Name=rfbD;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=AC3ASX_08460 JBYLIA010000002.1 Protein Homology CDS 277894 278772 . + 0 ID=cds-MHV1765308.1;Parent=gene-AC3ASX_08460;Dbxref=NCBI_GP:MHV1765308.1;Name=MHV1765308.1;Ontology_term=GO:0009243,GO:0019305,GO:0008831;gbkey=CDS;gene=rfbD;go_function=dTDP-4-dehydrorhamnose reductase activity|0008831||IEA;go_process=O antigen biosynthetic process|0009243||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922614.1;locus_tag=AC3ASX_08460;product=dTDP-4-dehydrorhamnose reductase;protein_id=MHV1765308.1;transl_table=11 JBYLIA010000002.1 Genbank gene 278774 279787 . + . ID=gene-AC3ASX_08465;Name=rfbB;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=AC3ASX_08465 JBYLIA010000002.1 Protein Homology CDS 278774 279787 . + 0 ID=cds-MHV1765309.1;Parent=gene-AC3ASX_08465;Dbxref=NCBI_GP:MHV1765309.1;Name=MHV1765309.1;Ontology_term=GO:0009225,GO:0019305,GO:0008460;gbkey=CDS;gene=rfbB;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714817.1;locus_tag=AC3ASX_08465;product=dTDP-glucose 4%2C6-dehydratase;protein_id=MHV1765309.1;transl_table=11 JBYLIA010000002.1 Genbank gene 279808 280800 . + . ID=gene-AC3ASX_08470;Name=pseB;gbkey=Gene;gene=pseB;gene_biotype=protein_coding;locus_tag=AC3ASX_08470 JBYLIA010000002.1 Protein Homology CDS 279808 280800 . + 0 ID=cds-MHV1765310.1;Parent=gene-AC3ASX_08470;Dbxref=NCBI_GP:MHV1765310.1;Name=MHV1765310.1;gbkey=CDS;gene=pseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016210501.1;locus_tag=AC3ASX_08470;product=UDP-N-acetylglucosamine 4%2C6-dehydratase (inverting);protein_id=MHV1765310.1;transl_table=11 JBYLIA010000002.1 Genbank gene 280803 281957 . + . ID=gene-AC3ASX_08475;Name=pseC;gbkey=Gene;gene=pseC;gene_biotype=protein_coding;locus_tag=AC3ASX_08475 JBYLIA010000002.1 Protein Homology CDS 280803 281957 . + 0 ID=cds-MHV1765311.1;Parent=gene-AC3ASX_08475;Dbxref=NCBI_GP:MHV1765311.1;Name=MHV1765311.1;Ontology_term=GO:0003824;gbkey=CDS;gene=pseC;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020560570.1;locus_tag=AC3ASX_08475;product=UDP-4-amino-4%2C6-dideoxy-N-acetyl-beta-L-altrosamine transaminase;protein_id=MHV1765311.1;transl_table=11 JBYLIA010000002.1 Genbank gene 281954 282652 . + . ID=gene-AC3ASX_08480;Name=pseF;gbkey=Gene;gene=pseF;gene_biotype=protein_coding;locus_tag=AC3ASX_08480 JBYLIA010000002.1 Protein Homology CDS 281954 282652 . + 0 ID=cds-MHV1765312.1;Parent=gene-AC3ASX_08480;Dbxref=NCBI_GP:MHV1765312.1;Name=MHV1765312.1;Ontology_term=GO:0070567;gbkey=CDS;gene=pseF;go_function=cytidylyltransferase activity|0070567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019556735.1;locus_tag=AC3ASX_08480;product=pseudaminic acid cytidylyltransferase;protein_id=MHV1765312.1;transl_table=11 JBYLIA010000002.1 Genbank gene 282652 284028 . + . ID=gene-AC3ASX_08485;Name=pseG;gbkey=Gene;gene=pseG;gene_biotype=protein_coding;locus_tag=AC3ASX_08485 JBYLIA010000002.1 Protein Homology CDS 282652 284028 . + 0 ID=cds-MHV1765313.1;Parent=gene-AC3ASX_08485;Dbxref=NCBI_GP:MHV1765313.1;Name=MHV1765313.1;Ontology_term=GO:0016758;gbkey=CDS;gene=pseG;go_function=hexosyltransferase activity|0016758||IEA;inference=COORDINATES: protein motif:HMM:TIGR03590.1;locus_tag=AC3ASX_08485;product=UDP-2%2C4-diacetamido-2%2C4%2C6-trideoxy-beta-L-altropyranose hydrolase;protein_id=MHV1765313.1;transl_table=11 JBYLIA010000002.1 Genbank gene 284015 285040 . + . ID=gene-AC3ASX_08490;Name=pseI;gbkey=Gene;gene=pseI;gene_biotype=protein_coding;locus_tag=AC3ASX_08490 JBYLIA010000002.1 Protein Homology CDS 284015 285040 . + 0 ID=cds-MHV1765314.1;Parent=gene-AC3ASX_08490;Dbxref=NCBI_GP:MHV1765314.1;Name=MHV1765314.1;Ontology_term=GO:0016765;gbkey=CDS;gene=pseI;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016210494.1;locus_tag=AC3ASX_08490;product=pseudaminic acid synthase;protein_id=MHV1765314.1;transl_table=11 JBYLIA010000002.1 Genbank gene 285174 285782 . + . ID=gene-AC3ASX_08495;Name=AC3ASX_08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08495 JBYLIA010000002.1 Protein Homology CDS 285174 285782 . + 0 ID=cds-MHV1765315.1;Parent=gene-AC3ASX_08495;Dbxref=NCBI_GP:MHV1765315.1;Name=MHV1765315.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: protein motif:HMM:NF012695.7;locus_tag=AC3ASX_08495;product=phosphocholine cytidylyltransferase family protein;protein_id=MHV1765315.1;transl_table=11 JBYLIA010000002.1 Genbank gene 285800 286471 . + . ID=gene-AC3ASX_08500;Name=AC3ASX_08500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08500 JBYLIA010000002.1 GeneMarkS-2+ CDS 285800 286471 . + 0 ID=cds-MHV1765316.1;Parent=gene-AC3ASX_08500;Dbxref=NCBI_GP:MHV1765316.1;Name=MHV1765316.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_08500;product=hypothetical protein;protein_id=MHV1765316.1;transl_table=11 JBYLIA010000002.1 Genbank gene 286474 286710 . + . ID=gene-AC3ASX_08505;Name=AC3ASX_08505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08505 JBYLIA010000002.1 Protein Homology CDS 286474 286710 . + 0 ID=cds-MHV1765317.1;Parent=gene-AC3ASX_08505;Dbxref=NCBI_GP:MHV1765317.1;Name=MHV1765317.1;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: protein motif:HMM:NF012382.7;locus_tag=AC3ASX_08505;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;protein_id=MHV1765317.1;transl_table=11 JBYLIA010000002.1 Genbank gene 286599 287018 . + . ID=gene-AC3ASX_08510;Name=AC3ASX_08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08510 JBYLIA010000002.1 GeneMarkS-2+ CDS 286599 287018 . + 0 ID=cds-MHV1765318.1;Parent=gene-AC3ASX_08510;Dbxref=NCBI_GP:MHV1765318.1;Name=MHV1765318.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_08510;product=hypothetical protein;protein_id=MHV1765318.1;transl_table=11 JBYLIA010000002.1 Genbank gene 287020 287559 . + . ID=gene-AC3ASX_08515;Name=AC3ASX_08515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08515 JBYLIA010000002.1 Protein Homology CDS 287020 287559 . + 0 ID=cds-MHV1765319.1;Parent=gene-AC3ASX_08515;Dbxref=NCBI_GP:MHV1765319.1;Name=MHV1765319.1;Ontology_term=GO:0032259,GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: protein motif:HMM:NF025217.7;locus_tag=AC3ASX_08515;product=class I SAM-dependent methyltransferase;protein_id=MHV1765319.1;transl_table=11 JBYLIA010000002.1 Genbank gene 288236 288601 . + . ID=gene-AC3ASX_08520;Name=AC3ASX_08520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08520 JBYLIA010000002.1 Protein Homology CDS 288236 288601 . + 0 ID=cds-MHV1765320.1;Parent=gene-AC3ASX_08520;Dbxref=NCBI_GP:MHV1765320.1;Name=MHV1765320.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016852.8;locus_tag=AC3ASX_08520;product=LicD family protein;protein_id=MHV1765320.1;transl_table=11 JBYLIA010000002.1 Genbank gene 288928 289743 . + . ID=gene-AC3ASX_08525;Name=AC3ASX_08525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08525 JBYLIA010000002.1 GeneMarkS-2+ CDS 288928 289743 . + 0 ID=cds-MHV1765321.1;Parent=gene-AC3ASX_08525;Dbxref=NCBI_GP:MHV1765321.1;Name=MHV1765321.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_08525;product=ParB N-terminal domain-containing protein;protein_id=MHV1765321.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 290027 290514 . + . ID=gene-AC3ASX_08530;Name=AC3ASX_08530;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08530;pseudo=true JBYLIA010000002.1 Protein Homology CDS 290027 290514 . + 0 ID=cds-AC3ASX_08530;Parent=gene-AC3ASX_08530;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003040341.1;locus_tag=AC3ASX_08530;product=transposase;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 290606 290862 . + . ID=gene-AC3ASX_08535;Name=AC3ASX_08535;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08535;pseudo=true JBYLIA010000002.1 Protein Homology CDS 290606 290862 . + 0 ID=cds-AC3ASX_08535;Parent=gene-AC3ASX_08535;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038789.1;locus_tag=AC3ASX_08535;product=transposase;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 290935 292038 . + . ID=gene-AC3ASX_08540;Name=AC3ASX_08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08540 JBYLIA010000002.1 Protein Homology CDS 290935 292038 . + 0 ID=cds-MHV1765322.1;Parent=gene-AC3ASX_08540;Dbxref=NCBI_GP:MHV1765322.1;Name=MHV1765322.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922637.1;locus_tag=AC3ASX_08540;product=glycosyltransferase family 2 protein;protein_id=MHV1765322.1;transl_table=11 JBYLIA010000002.1 Genbank gene 292440 293927 . + . ID=gene-AC3ASX_08545;Name=AC3ASX_08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08545 JBYLIA010000002.1 GeneMarkS-2+ CDS 292440 293927 . + 0 ID=cds-MHV1765323.1;Parent=gene-AC3ASX_08545;Dbxref=NCBI_GP:MHV1765323.1;Name=MHV1765323.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_08545;product=hypothetical protein;protein_id=MHV1765323.1;transl_table=11 JBYLIA010000002.1 Genbank gene 294372 295184 . + . ID=gene-AC3ASX_08550;Name=AC3ASX_08550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08550 JBYLIA010000002.1 Protein Homology CDS 294372 295184 . + 0 ID=cds-MHV1765324.1;Parent=gene-AC3ASX_08550;Dbxref=NCBI_GP:MHV1765324.1;Name=MHV1765324.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922640.1;locus_tag=AC3ASX_08550;product=ABC transporter permease;protein_id=MHV1765324.1;transl_table=11 JBYLIA010000002.1 Genbank gene 295184 296458 . + . ID=gene-AC3ASX_08555;Name=AC3ASX_08555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08555 JBYLIA010000002.1 Protein Homology CDS 295184 296458 . + 0 ID=cds-MHV1765325.1;Parent=gene-AC3ASX_08555;Dbxref=NCBI_GP:MHV1765325.1;Name=MHV1765325.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922641.1;locus_tag=AC3ASX_08555;product=ABC transporter ATP-binding protein;protein_id=MHV1765325.1;transl_table=11 JBYLIA010000002.1 Genbank gene 296478 296735 . + . ID=gene-AC3ASX_08560;Name=AC3ASX_08560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08560 JBYLIA010000002.1 GeneMarkS-2+ CDS 296478 296735 . + 0 ID=cds-MHV1765326.1;Parent=gene-AC3ASX_08560;Dbxref=NCBI_GP:MHV1765326.1;Name=MHV1765326.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_08560;product=hypothetical protein;protein_id=MHV1765326.1;transl_table=11 JBYLIA010000002.1 Genbank gene 296732 297301 . + . ID=gene-AC3ASX_08565;Name=AC3ASX_08565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08565 JBYLIA010000002.1 GeneMarkS-2+ CDS 296732 297301 . + 0 ID=cds-MHV1765327.1;Parent=gene-AC3ASX_08565;Dbxref=NCBI_GP:MHV1765327.1;Name=MHV1765327.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_08565;product=hypothetical protein;protein_id=MHV1765327.1;transl_table=11 JBYLIA010000002.1 Genbank gene 297308 298177 . + . ID=gene-AC3ASX_08570;Name=AC3ASX_08570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08570 JBYLIA010000002.1 Protein Homology CDS 297308 298177 . + 0 ID=cds-MHV1765328.1;Parent=gene-AC3ASX_08570;Dbxref=NCBI_GP:MHV1765328.1;Name=MHV1765328.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: protein motif:HMM:NF012745.7;locus_tag=AC3ASX_08570;product=glycosyltransferase family 2 protein;protein_id=MHV1765328.1;transl_table=11 JBYLIA010000002.1 Genbank gene 298174 299058 . + . ID=gene-AC3ASX_08575;Name=AC3ASX_08575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08575 JBYLIA010000002.1 Protein Homology CDS 298174 299058 . + 0 ID=cds-MHV1765329.1;Parent=gene-AC3ASX_08575;Dbxref=NCBI_GP:MHV1765329.1;Name=MHV1765329.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287290.1;locus_tag=AC3ASX_08575;product=glycosyltransferase;protein_id=MHV1765329.1;transl_table=11 JBYLIA010000002.1 Genbank gene 299076 299831 . + . ID=gene-AC3ASX_08580;Name=AC3ASX_08580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08580 JBYLIA010000002.1 Protein Homology CDS 299076 299831 . + 0 ID=cds-MHV1765330.1;Parent=gene-AC3ASX_08580;Dbxref=NCBI_GP:MHV1765330.1;Name=MHV1765330.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714851.1;locus_tag=AC3ASX_08580;product=glycosyltransferase family 2 protein;protein_id=MHV1765330.1;transl_table=11 JBYLIA010000002.1 Genbank gene 299890 300915 . + . ID=gene-AC3ASX_08585;Name=AC3ASX_08585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08585 JBYLIA010000002.1 Protein Homology CDS 299890 300915 . + 0 ID=cds-MHV1765331.1;Parent=gene-AC3ASX_08585;Dbxref=NCBI_GP:MHV1765331.1;Name=MHV1765331.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280638.1;locus_tag=AC3ASX_08585;product=glycosyltransferase;protein_id=MHV1765331.1;transl_table=11 JBYLIA010000002.1 Genbank gene 300912 302063 . + . ID=gene-AC3ASX_08590;Name=AC3ASX_08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08590 JBYLIA010000002.1 Protein Homology CDS 300912 302063 . + 0 ID=cds-MHV1765332.1;Parent=gene-AC3ASX_08590;Dbxref=NCBI_GP:MHV1765332.1;Name=MHV1765332.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287293.1;locus_tag=AC3ASX_08590;product=glycosyltransferase family 4 protein;protein_id=MHV1765332.1;transl_table=11 JBYLIA010000002.1 Genbank gene 302068 302838 . + . ID=gene-AC3ASX_08595;Name=AC3ASX_08595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08595 JBYLIA010000002.1 Protein Homology CDS 302068 302838 . + 0 ID=cds-MHV1765333.1;Parent=gene-AC3ASX_08595;Dbxref=NCBI_GP:MHV1765333.1;Name=MHV1765333.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280640.1;locus_tag=AC3ASX_08595;product=glycosyltransferase family 2 protein;protein_id=MHV1765333.1;transl_table=11 JBYLIA010000002.1 Genbank gene 302881 304365 . + . ID=gene-AC3ASX_08600;Name=AC3ASX_08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08600 JBYLIA010000002.1 Protein Homology CDS 302881 304365 . + 0 ID=cds-MHV1765334.1;Parent=gene-AC3ASX_08600;Dbxref=NCBI_GP:MHV1765334.1;Name=MHV1765334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922647.1;locus_tag=AC3ASX_08600;product=phosphomannomutase;protein_id=MHV1765334.1;transl_table=11 JBYLIA010000002.1 Genbank gene 305672 305896 . - . ID=gene-AC3ASX_08605;Name=AC3ASX_08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08605 JBYLIA010000002.1 GeneMarkS-2+ CDS 305672 305896 . - 0 ID=cds-MHV1765335.1;Parent=gene-AC3ASX_08605;Dbxref=NCBI_GP:MHV1765335.1;Name=MHV1765335.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_08605;product=hypothetical protein;protein_id=MHV1765335.1;transl_table=11 JBYLIA010000002.1 Genbank gene 306277 307539 . - . ID=gene-AC3ASX_08610;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=AC3ASX_08610 JBYLIA010000002.1 Protein Homology CDS 306277 307539 . - 0 ID=cds-MHV1765336.1;Parent=gene-AC3ASX_08610;Dbxref=NCBI_GP:MHV1765336.1;Name=MHV1765336.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429798.1;locus_tag=AC3ASX_08610;product=transcription termination factor Rho;protein_id=MHV1765336.1;transl_table=11 JBYLIA010000002.1 Genbank gene 307583 307906 . - . ID=gene-AC3ASX_08615;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=AC3ASX_08615 JBYLIA010000002.1 Protein Homology CDS 307583 307906 . - 0 ID=cds-MHV1765337.1;Parent=gene-AC3ASX_08615;Dbxref=NCBI_GP:MHV1765337.1;Name=MHV1765337.1;Ontology_term=GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025281.1;locus_tag=AC3ASX_08615;product=thioredoxin;protein_id=MHV1765337.1;transl_table=11 JBYLIA010000002.1 Genbank gene 308106 309032 . + . ID=gene-AC3ASX_08620;Name=AC3ASX_08620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08620 JBYLIA010000002.1 Protein Homology CDS 308106 309032 . + 0 ID=cds-MHV1765338.1;Parent=gene-AC3ASX_08620;Dbxref=NCBI_GP:MHV1765338.1;Name=MHV1765338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025278.1;locus_tag=AC3ASX_08620;product=Ppx/GppA phosphatase family protein;protein_id=MHV1765338.1;transl_table=11 JBYLIA010000002.1 Genbank gene 309129 310367 . + . ID=gene-AC3ASX_08625;Name=AC3ASX_08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08625 JBYLIA010000002.1 Protein Homology CDS 309129 310367 . + 0 ID=cds-MHV1765339.1;Parent=gene-AC3ASX_08625;Dbxref=NCBI_GP:MHV1765339.1;Name=MHV1765339.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037294.1;locus_tag=AC3ASX_08625;product=AAA family ATPase;protein_id=MHV1765339.1;transl_table=11 JBYLIA010000002.1 Genbank gene 310456 311412 . + . ID=gene-AC3ASX_08630;Name=AC3ASX_08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08630 JBYLIA010000002.1 Protein Homology CDS 310456 311412 . + 0 ID=cds-MHV1765340.1;Parent=gene-AC3ASX_08630;Dbxref=NCBI_GP:MHV1765340.1;Name=MHV1765340.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022267.1;locus_tag=AC3ASX_08630;product=DNA-directed RNA polymerase subunit alpha;protein_id=MHV1765340.1;transl_table=11 JBYLIA010000002.1 Genbank gene 311422 311508 . + . ID=gene-AC3ASX_08635;Name=AC3ASX_08635;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_08635 JBYLIA010000002.1 tRNAscan-SE tRNA 311422 311508 . + . ID=rna-AC3ASX_08635;Parent=gene-AC3ASX_08635;anticodon=(pos:311456..311458);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_08635;product=tRNA-Leu JBYLIA010000002.1 tRNAscan-SE exon 311422 311508 . + . ID=exon-AC3ASX_08635-1;Parent=rna-AC3ASX_08635;anticodon=(pos:311456..311458);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_08635;product=tRNA-Leu JBYLIA010000002.1 Genbank pseudogene 311733 312179 . - . ID=gene-AC3ASX_08640;Name=AC3ASX_08640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08640;pseudo=true JBYLIA010000002.1 Protein Homology CDS 311733 312179 . - 0 ID=cds-AC3ASX_08640;Parent=gene-AC3ASX_08640;Note=frameshifted;Ontology_term=GO:0008199;gbkey=CDS;go_function=ferric iron binding|0008199||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548754.1;locus_tag=AC3ASX_08640;product=ferritin-like domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 312968 313318 . + . ID=gene-AC3ASX_08645;Name=AC3ASX_08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08645 JBYLIA010000002.1 GeneMarkS-2+ CDS 312968 313318 . + 0 ID=cds-MHV1765341.1;Parent=gene-AC3ASX_08645;Dbxref=NCBI_GP:MHV1765341.1;Name=MHV1765341.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_08645;product=hypothetical protein;protein_id=MHV1765341.1;transl_table=11 JBYLIA010000002.1 Genbank gene 313517 313960 . + . ID=gene-AC3ASX_08650;Name=AC3ASX_08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08650 JBYLIA010000002.1 GeneMarkS-2+ CDS 313517 313960 . + 0 ID=cds-MHV1765342.1;Parent=gene-AC3ASX_08650;Dbxref=NCBI_GP:MHV1765342.1;Name=MHV1765342.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_08650;product=hypothetical protein;protein_id=MHV1765342.1;transl_table=11 JBYLIA010000002.1 Genbank gene 314052 314819 . + . ID=gene-AC3ASX_08655;Name=AC3ASX_08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08655 JBYLIA010000002.1 Protein Homology CDS 314052 314819 . + 0 ID=cds-MHV1765343.1;Parent=gene-AC3ASX_08655;Dbxref=NCBI_GP:MHV1765343.1;Name=MHV1765343.1;Ontology_term=GO:0004536,GO:0016788,GO:0046872;gbkey=CDS;go_function=DNA nuclease activity|0004536||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339269.1;locus_tag=AC3ASX_08655;product=TatD family hydrolase;protein_id=MHV1765343.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 314946 315272 . + . ID=gene-AC3ASX_08660;Name=AC3ASX_08660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08660;pseudo=true JBYLIA010000002.1 Protein Homology CDS 314946 315272 . + 0 ID=cds-AC3ASX_08660;Parent=gene-AC3ASX_08660;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003040313.1;locus_tag=AC3ASX_08660;product=cupin domain-containing protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 315269 316043 . + . ID=gene-AC3ASX_08665;Name=AC3ASX_08665;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08665;pseudo=true JBYLIA010000002.1 Protein Homology CDS 315269 316043 . + 0 ID=cds-AC3ASX_08665;Parent=gene-AC3ASX_08665;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018155.1;locus_tag=AC3ASX_08665;product=TSUP family transporter;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 316145 317070 . + . ID=gene-AC3ASX_08670;Name=AC3ASX_08670;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08670;pseudo=true JBYLIA010000002.1 Protein Homology CDS 316145 317070 . + 0 ID=cds-AC3ASX_08670;Parent=gene-AC3ASX_08670;Note=frameshifted;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714869.1;locus_tag=AC3ASX_08670;product=ABC transporter ATP-binding protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 317075 317854 . + . ID=gene-AC3ASX_08675;Name=AC3ASX_08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08675 JBYLIA010000002.1 Protein Homology CDS 317075 317854 . + 0 ID=cds-MHV1765344.1;Parent=gene-AC3ASX_08675;Dbxref=NCBI_GP:MHV1765344.1;Name=MHV1765344.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037281.1;locus_tag=AC3ASX_08675;product=ABC transporter permease;protein_id=MHV1765344.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 317865 318811 . - . ID=gene-AC3ASX_08680;Name=AC3ASX_08680;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08680;pseudo=true JBYLIA010000002.1 Protein Homology CDS 317865 318811 . - 0 ID=cds-AC3ASX_08680;Parent=gene-AC3ASX_08680;Note=frameshifted;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015029.1;locus_tag=AC3ASX_08680;product=glycosyltransferase family 2 protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 318998 319888 . + . ID=gene-AC3ASX_08685;Name=AC3ASX_08685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08685 JBYLIA010000002.1 Protein Homology CDS 318998 319888 . + 0 ID=cds-MHV1765345.1;Parent=gene-AC3ASX_08685;Dbxref=NCBI_GP:MHV1765345.1;Name=MHV1765345.1;Ontology_term=GO:0006741,GO:0019674,GO:0005524,GO:0016773;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=NADP+ biosynthetic process|0006741||IEA,NAD+ metabolic process|0019674||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037275.1;locus_tag=AC3ASX_08685;product=NAD(+)/NADH kinase;protein_id=MHV1765345.1;transl_table=11 JBYLIA010000002.1 Genbank gene 319950 320102 . - . ID=gene-AC3ASX_08690;Name=AC3ASX_08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08690 JBYLIA010000002.1 GeneMarkS-2+ CDS 319950 320102 . - 0 ID=cds-MHV1765346.1;Parent=gene-AC3ASX_08690;Dbxref=NCBI_GP:MHV1765346.1;Name=MHV1765346.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_08690;product=hypothetical protein;protein_id=MHV1765346.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 320140 320244 . + . ID=gene-AC3ASX_08695;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=pseudogene;gene_synonym=yggH;locus_tag=AC3ASX_08695;pseudo=true JBYLIA010000002.1 Protein Homology CDS 320140 320244 . + 0 ID=cds-AC3ASX_08695;Parent=gene-AC3ASX_08695;Note=tRNA (guanine-N(7)-)-methyltransferase%3B catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;gene=trmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015034.1;locus_tag=AC3ASX_08695;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 320260 320821 . + . ID=gene-AC3ASX_08700;Name=AC3ASX_08700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08700;pseudo=true JBYLIA010000002.1 Protein Homology CDS 320260 320821 . + 0 ID=cds-AC3ASX_08700;Parent=gene-AC3ASX_08700;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548739.1;locus_tag=AC3ASX_08700;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 320772 321055 . + . ID=gene-AC3ASX_08705;Name=AC3ASX_08705;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08705;pseudo=true JBYLIA010000002.1 Protein Homology CDS 320772 321055 . + 0 ID=cds-AC3ASX_08705;Parent=gene-AC3ASX_08705;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550096.1;locus_tag=AC3ASX_08705;product=GNAT family N-acetyltransferase;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 321092 321777 . + . ID=gene-AC3ASX_08710;Name=AC3ASX_08710;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08710;pseudo=true JBYLIA010000002.1 Protein Homology CDS 321092 321777 . + 0 ID=cds-AC3ASX_08710;Parent=gene-AC3ASX_08710;Note=frameshifted%3B internal stop;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280662.1;locus_tag=AC3ASX_08710;product=MBL fold metallo-hydrolase;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 321779 322530 . + . ID=gene-AC3ASX_08715;Name=AC3ASX_08715;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08715;pseudo=true JBYLIA010000002.1 Protein Homology CDS 321779 322530 . + 0 ID=cds-AC3ASX_08715;Parent=gene-AC3ASX_08715;Note=frameshifted%3B internal stop;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003040275.1;locus_tag=AC3ASX_08715;product=sulfite exporter TauE/SafE family protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 322516 323124 . - . ID=gene-AC3ASX_08720;Name=AC3ASX_08720;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08720;pseudo=true JBYLIA010000002.1 Protein Homology CDS 322516 323124 . - 0 ID=cds-AC3ASX_08720;Parent=gene-AC3ASX_08720;Note=frameshifted;Ontology_term=GO:0008198,GO:0016705;gbkey=CDS;go_function=ferrous iron binding|0008198||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003040271.1;locus_tag=AC3ASX_08720;product=2OG-Fe(II) oxygenase;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 323233 323622 . - . ID=gene-AC3ASX_08725;Name=AC3ASX_08725;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08725;pseudo=true JBYLIA010000002.1 Protein Homology CDS 323233 323622 . - 0 ID=cds-AC3ASX_08725;Parent=gene-AC3ASX_08725;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022238.1;locus_tag=AC3ASX_08725;product=YcgN family cysteine cluster protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 323701 324171 . - . ID=gene-AC3ASX_08730;Name=AC3ASX_08730;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08730;pseudo=true JBYLIA010000002.1 Protein Homology CDS 323701 324171 . - 0 ID=cds-AC3ASX_08730;Parent=gene-AC3ASX_08730;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550087.1;locus_tag=AC3ASX_08730;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 324223 324582 . - . ID=gene-AC3ASX_08735;Name=AC3ASX_08735;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08735;pseudo=true JBYLIA010000002.1 Protein Homology CDS 324223 324582 . - 0 ID=cds-AC3ASX_08735;Parent=gene-AC3ASX_08735;Note=internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003040263.1;locus_tag=AC3ASX_08735;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 324802 325227 . + . ID=gene-AC3ASX_08740;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=AC3ASX_08740 JBYLIA010000002.1 Protein Homology CDS 324802 325227 . + 0 ID=cds-MHV1765347.1;Parent=gene-AC3ASX_08740;Dbxref=NCBI_GP:MHV1765347.1;Name=MHV1765347.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922703.1;locus_tag=AC3ASX_08740;product=transcription antitermination factor NusB;protein_id=MHV1765347.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 325211 325946 . - . ID=gene-AC3ASX_08745;Name=AC3ASX_08745;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08745;pseudo=true JBYLIA010000002.1 Protein Homology CDS 325211 325946 . - 0 ID=cds-AC3ASX_08745;Parent=gene-AC3ASX_08745;Note=frameshifted%3B internal stop;Ontology_term=GO:0008152;gbkey=CDS;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339302.1;locus_tag=AC3ASX_08745;product=nitrilase-related carbon-nitrogen hydrolase;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 326178 326610 . + . ID=gene-AC3ASX_08750;Name=AC3ASX_08750;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08750;pseudo=true JBYLIA010000002.1 Protein Homology CDS 326178 326610 . + 0 ID=cds-AC3ASX_08750;Parent=gene-AC3ASX_08750;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429332.1;locus_tag=AC3ASX_08750;product=DUF3568 family protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 326800 327811 . - . ID=gene-AC3ASX_08755;Name=AC3ASX_08755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08755;pseudo=true JBYLIA010000002.1 Protein Homology CDS 326800 327811 . - 0 ID=cds-AC3ASX_08755;Parent=gene-AC3ASX_08755;Note=frameshifted%3B internal stop;Ontology_term=GO:0009058,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018298913.1;locus_tag=AC3ASX_08755;product=aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 328054 329241 . - . ID=gene-AC3ASX_08760;Name=AC3ASX_08760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08760 JBYLIA010000002.1 Protein Homology CDS 328054 329241 . - 0 ID=cds-MHV1765348.1;Parent=gene-AC3ASX_08760;Dbxref=NCBI_GP:MHV1765348.1;Name=MHV1765348.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF039218.6;locus_tag=AC3ASX_08760;product=acyltransferase family protein;protein_id=MHV1765348.1;transl_table=11 JBYLIA010000002.1 Genbank gene 329274 329972 . - . ID=gene-AC3ASX_08765;Name=AC3ASX_08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08765 JBYLIA010000002.1 Protein Homology CDS 329274 329972 . - 0 ID=cds-MHV1765349.1;Parent=gene-AC3ASX_08765;Dbxref=NCBI_GP:MHV1765349.1;Name=MHV1765349.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: protein motif:HMM:NF013884.7;locus_tag=AC3ASX_08765;product=acyltransferase family protein;protein_id=MHV1765349.1;transl_table=11 JBYLIA010000002.1 Genbank gene 330191 330709 . + . ID=gene-AC3ASX_08770;Name=AC3ASX_08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08770 JBYLIA010000002.1 Protein Homology CDS 330191 330709 . + 0 ID=cds-MHV1765350.1;Parent=gene-AC3ASX_08770;Dbxref=NCBI_GP:MHV1765350.1;Name=MHV1765350.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039639.6;locus_tag=AC3ASX_08770;product=DUF6056 family protein;protein_id=MHV1765350.1;transl_table=11 JBYLIA010000002.1 Genbank gene 330816 331025 . + . ID=gene-AC3ASX_08775;Name=AC3ASX_08775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08775 JBYLIA010000002.1 Protein Homology CDS 330816 331025 . + 0 ID=cds-MHV1765351.1;Parent=gene-AC3ASX_08775;Dbxref=NCBI_GP:MHV1765351.1;Name=MHV1765351.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039639.6;locus_tag=AC3ASX_08775;product=hypothetical protein;protein_id=MHV1765351.1;transl_table=11 JBYLIA010000002.1 Genbank gene 331167 331409 . + . ID=gene-AC3ASX_08780;Name=AC3ASX_08780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08780 JBYLIA010000002.1 GeneMarkS-2+ CDS 331167 331409 . + 0 ID=cds-MHV1765352.1;Parent=gene-AC3ASX_08780;Dbxref=NCBI_GP:MHV1765352.1;Name=MHV1765352.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_08780;product=hypothetical protein;protein_id=MHV1765352.1;transl_table=11 JBYLIA010000002.1 Genbank gene 331492 333189 . - . ID=gene-AC3ASX_08785;Name=AC3ASX_08785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08785 JBYLIA010000002.1 Protein Homology CDS 331492 333189 . - 0 ID=cds-MHV1765353.1;Parent=gene-AC3ASX_08785;Dbxref=NCBI_GP:MHV1765353.1;Name=MHV1765353.1;Ontology_term=GO:0006418,GO:0006433,GO:0000166,GO:0002161,GO:0004812,GO:0004827,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA deacylase activity|0002161||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA,prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550080.1;locus_tag=AC3ASX_08785;product=proline--tRNA ligase;protein_id=MHV1765353.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 333453 333990 . - . ID=gene-AC3ASX_08790;Name=AC3ASX_08790;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08790;pseudo=true JBYLIA010000002.1 Protein Homology CDS 333453 333990 . - 0 ID=cds-AC3ASX_08790;Parent=gene-AC3ASX_08790;Note=frameshifted;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550079.1;locus_tag=AC3ASX_08790;product=disulfide bond formation protein B;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 334382 334456 . - . ID=gene-AC3ASX_08795;Name=AC3ASX_08795;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_08795 JBYLIA010000002.1 tRNAscan-SE tRNA 334382 334456 . - . ID=rna-AC3ASX_08795;Parent=gene-AC3ASX_08795;anticodon=(pos:complement(334422..334424));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_08795;product=tRNA-Asn JBYLIA010000002.1 tRNAscan-SE exon 334382 334456 . - . ID=exon-AC3ASX_08795-1;Parent=rna-AC3ASX_08795;anticodon=(pos:complement(334422..334424));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_08795;product=tRNA-Asn JBYLIA010000002.1 Genbank gene 334694 335113 . + . ID=gene-AC3ASX_08800;Name=AC3ASX_08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08800 JBYLIA010000002.1 Protein Homology CDS 334694 335113 . + 0 ID=cds-MHV1765354.1;Parent=gene-AC3ASX_08800;Dbxref=NCBI_GP:MHV1765354.1;Name=MHV1765354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550078.1;locus_tag=AC3ASX_08800;product=SufE family protein;protein_id=MHV1765354.1;transl_table=11 JBYLIA010000002.1 Genbank gene 335110 335859 . + . ID=gene-AC3ASX_08805;Name=AC3ASX_08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08805 JBYLIA010000002.1 Protein Homology CDS 335110 335859 . + 0 ID=cds-MHV1765355.1;Parent=gene-AC3ASX_08805;Dbxref=NCBI_GP:MHV1765355.1;Name=MHV1765355.1;Ontology_term=GO:0006780,GO:0006782,GO:0004852;gbkey=CDS;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA,protoporphyrinogen IX biosynthetic process|0006782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022220.1;locus_tag=AC3ASX_08805;product=uroporphyrinogen-III synthase;protein_id=MHV1765355.1;transl_table=11 JBYLIA010000002.1 Genbank gene 335825 336922 . + . ID=gene-AC3ASX_08810;Name=AC3ASX_08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08810 JBYLIA010000002.1 Protein Homology CDS 335825 336922 . + 0 ID=cds-MHV1765356.1;Parent=gene-AC3ASX_08810;Dbxref=NCBI_GP:MHV1765356.1;Name=MHV1765356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287338.1;locus_tag=AC3ASX_08810;product=hypothetical protein;protein_id=MHV1765356.1;transl_table=11 JBYLIA010000002.1 Genbank gene 336906 338063 . + . ID=gene-AC3ASX_08815;Name=AC3ASX_08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08815 JBYLIA010000002.1 Protein Homology CDS 336906 338063 . + 0 ID=cds-MHV1765357.1;Parent=gene-AC3ASX_08815;Dbxref=NCBI_GP:MHV1765357.1;Name=MHV1765357.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037225.1;locus_tag=AC3ASX_08815;product=heme biosynthesis protein HemY;protein_id=MHV1765357.1;transl_table=11 JBYLIA010000002.1 Genbank gene 338077 338835 . + . ID=gene-AC3ASX_08820;Name=AC3ASX_08820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08820 JBYLIA010000002.1 Protein Homology CDS 338077 338835 . + 0 ID=cds-MHV1765358.1;Parent=gene-AC3ASX_08820;Dbxref=NCBI_GP:MHV1765358.1;Name=MHV1765358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548717.1;locus_tag=AC3ASX_08820;product=hydroxyacylglutathione hydrolase family protein;protein_id=MHV1765358.1;transl_table=11 JBYLIA010000002.1 Genbank gene 339016 339723 . - . ID=gene-AC3ASX_08825;Name=AC3ASX_08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08825 JBYLIA010000002.1 Protein Homology CDS 339016 339723 . - 0 ID=cds-MHV1765359.1;Parent=gene-AC3ASX_08825;Dbxref=NCBI_GP:MHV1765359.1;Name=MHV1765359.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034598.1;locus_tag=AC3ASX_08825;product=SPOR domain-containing protein;protein_id=MHV1765359.1;transl_table=11 JBYLIA010000002.1 Genbank gene 339836 340060 . + . ID=gene-AC3ASX_08830;Name=AC3ASX_08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08830 JBYLIA010000002.1 Protein Homology CDS 339836 340060 . + 0 ID=cds-MHV1765360.1;Parent=gene-AC3ASX_08830;Dbxref=NCBI_GP:MHV1765360.1;Name=MHV1765360.1;Ontology_term=GO:0006826,GO:0046914;gbkey=CDS;go_function=transition metal ion binding|0046914||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034596.1;locus_tag=AC3ASX_08830;product=FeoA family protein;protein_id=MHV1765360.1;transl_table=11 JBYLIA010000002.1 Genbank gene 340077 341708 . + . ID=gene-AC3ASX_08835;Name=AC3ASX_08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08835 JBYLIA010000002.1 Protein Homology CDS 340077 341708 . + 0 ID=cds-MHV1765361.1;Parent=gene-AC3ASX_08835;Dbxref=NCBI_GP:MHV1765361.1;Name=MHV1765361.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015081.1;locus_tag=AC3ASX_08835;product=hypothetical protein;protein_id=MHV1765361.1;transl_table=11 JBYLIA010000002.1 Genbank gene 341823 341897 . + . ID=gene-AC3ASX_08840;Name=AC3ASX_08840;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_08840 JBYLIA010000002.1 tRNAscan-SE tRNA 341823 341897 . + . ID=rna-AC3ASX_08840;Parent=gene-AC3ASX_08840;anticodon=(pos:341855..341857);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_08840;product=tRNA-Gly JBYLIA010000002.1 tRNAscan-SE exon 341823 341897 . + . ID=exon-AC3ASX_08840-1;Parent=rna-AC3ASX_08840;anticodon=(pos:341855..341857);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_08840;product=tRNA-Gly JBYLIA010000002.1 Genbank gene 341913 341986 . + . ID=gene-AC3ASX_08845;Name=AC3ASX_08845;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_08845 JBYLIA010000002.1 tRNAscan-SE tRNA 341913 341986 . + . ID=rna-AC3ASX_08845;Parent=gene-AC3ASX_08845;anticodon=(pos:341945..341947);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_08845;product=tRNA-Cys JBYLIA010000002.1 tRNAscan-SE exon 341913 341986 . + . ID=exon-AC3ASX_08845-1;Parent=rna-AC3ASX_08845;anticodon=(pos:341945..341947);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_08845;product=tRNA-Cys JBYLIA010000002.1 Genbank gene 341992 342080 . + . ID=gene-AC3ASX_08850;Name=AC3ASX_08850;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_08850 JBYLIA010000002.1 tRNAscan-SE tRNA 341992 342080 . + . ID=rna-AC3ASX_08850;Parent=gene-AC3ASX_08850;anticodon=(pos:342026..342028);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_08850;product=tRNA-Leu JBYLIA010000002.1 tRNAscan-SE exon 341992 342080 . + . ID=exon-AC3ASX_08850-1;Parent=rna-AC3ASX_08850;anticodon=(pos:342026..342028);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_08850;product=tRNA-Leu JBYLIA010000002.1 Genbank gene 342933 343118 . + . ID=gene-AC3ASX_08855;Name=AC3ASX_08855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08855 JBYLIA010000002.1 GeneMarkS-2+ CDS 342933 343118 . + 0 ID=cds-MHV1765362.1;Parent=gene-AC3ASX_08855;Dbxref=NCBI_GP:MHV1765362.1;Name=MHV1765362.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_08855;product=hypothetical protein;protein_id=MHV1765362.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 343264 344638 . + . ID=gene-AC3ASX_08860;Name=AC3ASX_08860;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08860;pseudo=true JBYLIA010000002.1 Protein Homology CDS 343264 344638 . + 0 ID=cds-AC3ASX_08860;Parent=gene-AC3ASX_08860;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0097054,GO:0015930,GO:0016638;gbkey=CDS;go_function=glutamate synthase activity|0015930||IEA,oxidoreductase activity%2C acting on the CH-NH2 group of donors|0016638||IEA;go_process=L-glutamate biosynthetic process|0097054||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548711.1;locus_tag=AC3ASX_08860;product=FMN-binding glutamate synthase family protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 344702 347989 . + . ID=gene-AC3ASX_08865;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=AC3ASX_08865 JBYLIA010000002.1 Protein Homology CDS 344702 347989 . + 0 ID=cds-MHV1765363.1;Parent=gene-AC3ASX_08865;Dbxref=NCBI_GP:MHV1765363.1;Name=MHV1765363.1;Ontology_term=GO:0006281,GO:0006310,GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:TIGR01450.1;locus_tag=AC3ASX_08865;product=exodeoxyribonuclease V subunit gamma;protein_id=MHV1765363.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 347973 348502 . + . ID=gene-AC3ASX_08870;Name=AC3ASX_08870;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08870;pseudo=true JBYLIA010000002.1 Protein Homology CDS 347973 348502 . + 0 ID=cds-AC3ASX_08870;Parent=gene-AC3ASX_08870;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548709.1;locus_tag=AC3ASX_08870;product=FUSC family protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 348544 352116 . + . ID=gene-AC3ASX_08875;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=AC3ASX_08875 JBYLIA010000002.1 Protein Homology CDS 348544 352116 . + 0 ID=cds-MHV1765364.1;Parent=gene-AC3ASX_08875;Dbxref=NCBI_GP:MHV1765364.1;Name=MHV1765364.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524,GO:0008854,GO:0009338;gbkey=CDS;gene=recB;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:TIGR00609.1;locus_tag=AC3ASX_08875;product=exodeoxyribonuclease V subunit beta;protein_id=MHV1765364.1;transl_table=11 JBYLIA010000002.1 Genbank gene 352109 353845 . + . ID=gene-AC3ASX_08880;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=AC3ASX_08880 JBYLIA010000002.1 Protein Homology CDS 352109 353845 . + 0 ID=cds-MHV1765365.1;Parent=gene-AC3ASX_08880;Dbxref=NCBI_GP:MHV1765365.1;Name=MHV1765365.1;Ontology_term=GO:0006281,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003030257.1;locus_tag=AC3ASX_08880;product=exodeoxyribonuclease V subunit alpha;protein_id=MHV1765365.1;transl_table=11 JBYLIA010000002.1 Genbank gene 353814 354794 . - . ID=gene-AC3ASX_08885;Name=AC3ASX_08885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08885 JBYLIA010000002.1 Protein Homology CDS 353814 354794 . - 0 ID=cds-MHV1765366.1;Parent=gene-AC3ASX_08885;Dbxref=NCBI_GP:MHV1765366.1;Name=MHV1765366.1;Ontology_term=GO:0006520,GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: protein motif:HMM:NF014827.7;locus_tag=AC3ASX_08885;product=Glu/Leu/Phe/Val dehydrogenase dimerization domain-containing protein;protein_id=MHV1765366.1;transl_table=11 JBYLIA010000002.1 Genbank gene 354794 355564 . - . ID=gene-AC3ASX_08890;Name=AC3ASX_08890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08890 JBYLIA010000002.1 Protein Homology CDS 354794 355564 . - 0 ID=cds-MHV1765367.1;Parent=gene-AC3ASX_08890;Dbxref=NCBI_GP:MHV1765367.1;Name=MHV1765367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003015105.1;locus_tag=AC3ASX_08890;product=type III pantothenate kinase;protein_id=MHV1765367.1;transl_table=11 JBYLIA010000002.1 Genbank gene 355568 355903 . - . ID=gene-AC3ASX_08895;Name=AC3ASX_08895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08895 JBYLIA010000002.1 Protein Homology CDS 355568 355903 . - 0 ID=cds-MHV1765368.1;Parent=gene-AC3ASX_08895;Dbxref=NCBI_GP:MHV1765368.1;Name=MHV1765368.1;Ontology_term=GO:0006523,GO:0015940,GO:0004068;gbkey=CDS;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA,pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339330.1;locus_tag=AC3ASX_08895;product=aspartate 1-decarboxylase;protein_id=MHV1765368.1;transl_table=11 JBYLIA010000002.1 Genbank gene 355897 356682 . - . ID=gene-AC3ASX_08900;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=AC3ASX_08900 JBYLIA010000002.1 Protein Homology CDS 355897 356682 . - 0 ID=cds-MHV1765369.1;Parent=gene-AC3ASX_08900;Dbxref=NCBI_GP:MHV1765369.1;Name=MHV1765369.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003040203.1;locus_tag=AC3ASX_08900;product=pantoate--beta-alanine ligase;protein_id=MHV1765369.1;transl_table=11 JBYLIA010000002.1 Genbank gene 356669 357466 . - . ID=gene-AC3ASX_08905;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=AC3ASX_08905 JBYLIA010000002.1 Protein Homology CDS 356669 357466 . - 0 ID=cds-MHV1765370.1;Parent=gene-AC3ASX_08905;Dbxref=NCBI_GP:MHV1765370.1;Name=MHV1765370.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287358.1;locus_tag=AC3ASX_08905;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=MHV1765370.1;transl_table=11 JBYLIA010000002.1 Genbank gene 357463 358179 . - . ID=gene-AC3ASX_08910;Name=AC3ASX_08910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08910 JBYLIA010000002.1 Protein Homology CDS 357463 358179 . - 0 ID=cds-MHV1765371.1;Parent=gene-AC3ASX_08910;Dbxref=NCBI_GP:MHV1765371.1;Name=MHV1765371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022186.1;locus_tag=AC3ASX_08910;product=DUF2520 domain-containing protein;protein_id=MHV1765371.1;transl_table=11 JBYLIA010000002.1 Genbank gene 358488 360524 . + . ID=gene-AC3ASX_08915;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=AC3ASX_08915 JBYLIA010000002.1 Protein Homology CDS 358488 360524 . + 0 ID=cds-MHV1765372.1;Parent=gene-AC3ASX_08915;Dbxref=NCBI_GP:MHV1765372.1;Name=MHV1765372.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003024021.1;locus_tag=AC3ASX_08915;product=NAD-dependent DNA ligase LigA;protein_id=MHV1765372.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 360560 361058 . + . ID=gene-AC3ASX_08920;Name=AC3ASX_08920;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08920;pseudo=true JBYLIA010000002.1 Protein Homology CDS 360560 361058 . + 0 ID=cds-AC3ASX_08920;Parent=gene-AC3ASX_08920;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548701.1;locus_tag=AC3ASX_08920;product=YiiX/YebB-like N1pC/P60 family cysteine hydrolase;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 361154 361646 . + . ID=gene-AC3ASX_08925;Name=AC3ASX_08925;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08925;pseudo=true JBYLIA010000002.1 Protein Homology CDS 361154 361646 . + 0 ID=cds-AC3ASX_08925;Parent=gene-AC3ASX_08925;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548700.1;locus_tag=AC3ASX_08925;product=N-acetyltransferase family protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 361624 362906 . - . ID=gene-AC3ASX_08930;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=pseudogene;locus_tag=AC3ASX_08930;pseudo=true JBYLIA010000002.1 Protein Homology CDS 361624 362906 . - 0 ID=cds-AC3ASX_08930;Parent=gene-AC3ASX_08930;Note=frameshifted;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922743.1;locus_tag=AC3ASX_08930;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 362906 363694 . - . ID=gene-AC3ASX_08935;Name=AC3ASX_08935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08935 JBYLIA010000002.1 Protein Homology CDS 362906 363694 . - 0 ID=cds-MHV1765373.1;Parent=gene-AC3ASX_08935;Dbxref=NCBI_GP:MHV1765373.1;Name=MHV1765373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429352.1;locus_tag=AC3ASX_08935;product=inositol monophosphatase family protein;protein_id=MHV1765373.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 363778 364580 . - . ID=gene-AC3ASX_08940;Name=AC3ASX_08940;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08940;pseudo=true JBYLIA010000002.1 Protein Homology CDS 363778 364580 . - 0 ID=cds-AC3ASX_08940;Parent=gene-AC3ASX_08940;Note=frameshifted;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003025394.1;locus_tag=AC3ASX_08940;product=YeiH family protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 364691 365887 . - . ID=gene-AC3ASX_08945;Name=tsgA;gbkey=Gene;gene=tsgA;gene_biotype=protein_coding;locus_tag=AC3ASX_08945 JBYLIA010000002.1 Protein Homology CDS 364691 365887 . - 0 ID=cds-MHV1765374.1;Parent=gene-AC3ASX_08945;Dbxref=NCBI_GP:MHV1765374.1;Name=MHV1765374.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=tsgA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034560.1;locus_tag=AC3ASX_08945;product=MFS transporter TsgA;protein_id=MHV1765374.1;transl_table=11 JBYLIA010000002.1 Genbank gene 366009 366716 . + . ID=gene-AC3ASX_08950;Name=mnmC2;gbkey=Gene;gene=mnmC2;gene_biotype=protein_coding;locus_tag=AC3ASX_08950 JBYLIA010000002.1 Protein Homology CDS 366009 366716 . + 0 ID=cds-MHV1765375.1;Parent=gene-AC3ASX_08950;Dbxref=NCBI_GP:MHV1765375.1;Name=MHV1765375.1;Ontology_term=GO:0006400,GO:0004808;gbkey=CDS;gene=mnmC2;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922747.1;locus_tag=AC3ASX_08950;product=tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmC2;protein_id=MHV1765375.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 366685 366971 . - . ID=gene-AC3ASX_08955;Name=AC3ASX_08955;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08955;pseudo=true JBYLIA010000002.1 Protein Homology CDS 366685 366971 . - 0 ID=cds-AC3ASX_08955;Parent=gene-AC3ASX_08955;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922748.1;locus_tag=AC3ASX_08955;product=YciI family protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 367053 368312 . - . ID=gene-AC3ASX_08960;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=AC3ASX_08960 JBYLIA010000002.1 Protein Homology CDS 367053 368312 . - 0 ID=cds-MHV1765376.1;Parent=gene-AC3ASX_08960;Dbxref=NCBI_GP:MHV1765376.1;Name=MHV1765376.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548693.1;locus_tag=AC3ASX_08960;product=beta-ketoacyl-ACP synthase II;protein_id=MHV1765376.1;transl_table=11 JBYLIA010000002.1 Genbank gene 368393 368635 . - . ID=gene-AC3ASX_08965;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=AC3ASX_08965 JBYLIA010000002.1 Protein Homology CDS 368393 368635 . - 0 ID=cds-MHV1765377.1;Parent=gene-AC3ASX_08965;Dbxref=NCBI_GP:MHV1765377.1;Name=MHV1765377.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287370.1;locus_tag=AC3ASX_08965;product=acyl carrier protein;protein_id=MHV1765377.1;transl_table=11 JBYLIA010000002.1 Genbank gene 368731 369477 . - . ID=gene-AC3ASX_08970;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=AC3ASX_08970 JBYLIA010000002.1 Protein Homology CDS 368731 369477 . - 0 ID=cds-MHV1765378.1;Parent=gene-AC3ASX_08970;Dbxref=NCBI_GP:MHV1765378.1;Name=MHV1765378.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034557.1;locus_tag=AC3ASX_08970;product=3-oxoacyl-ACP reductase FabG;protein_id=MHV1765378.1;transl_table=11 JBYLIA010000002.1 Genbank gene 369491 370411 . - . ID=gene-AC3ASX_08975;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=AC3ASX_08975 JBYLIA010000002.1 Protein Homology CDS 369491 370411 . - 0 ID=cds-MHV1765379.1;Parent=gene-AC3ASX_08975;Dbxref=NCBI_GP:MHV1765379.1;Name=MHV1765379.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004287372.1;locus_tag=AC3ASX_08975;product=ACP S-malonyltransferase;protein_id=MHV1765379.1;transl_table=11 JBYLIA010000002.1 Genbank gene 370463 371434 . - . ID=gene-AC3ASX_08980;Name=AC3ASX_08980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_08980 JBYLIA010000002.1 Protein Homology CDS 370463 371434 . - 0 ID=cds-MHV1765380.1;Parent=gene-AC3ASX_08980;Dbxref=NCBI_GP:MHV1765380.1;Name=MHV1765380.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714919.1;locus_tag=AC3ASX_08980;product=beta-ketoacyl-ACP synthase III;protein_id=MHV1765380.1;transl_table=11 JBYLIA010000002.1 Genbank gene 371538 372584 . - . ID=gene-AC3ASX_08985;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=AC3ASX_08985 JBYLIA010000002.1 Protein Homology CDS 371538 372584 . - 0 ID=cds-MHV1765381.1;Parent=gene-AC3ASX_08985;Dbxref=NCBI_GP:MHV1765381.1;Name=MHV1765381.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548689.1;locus_tag=AC3ASX_08985;product=phosphate acyltransferase PlsX;protein_id=MHV1765381.1;transl_table=11 JBYLIA010000002.1 Genbank gene 372684 372866 . - . ID=gene-AC3ASX_08990;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=AC3ASX_08990 JBYLIA010000002.1 Protein Homology CDS 372684 372866 . - 0 ID=cds-MHV1765382.1;Parent=gene-AC3ASX_08990;Dbxref=NCBI_GP:MHV1765382.1;Name=MHV1765382.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548688.1;locus_tag=AC3ASX_08990;product=50S ribosomal protein L32;protein_id=MHV1765382.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 372912 373413 . - . ID=gene-AC3ASX_08995;Name=AC3ASX_08995;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_08995;pseudo=true JBYLIA010000002.1 Protein Homology CDS 372912 373413 . - 0 ID=cds-AC3ASX_08995;Parent=gene-AC3ASX_08995;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003034549.1;locus_tag=AC3ASX_08995;product=YceD family protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 373551 375542 . + . ID=gene-AC3ASX_09000;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=AC3ASX_09000 JBYLIA010000002.1 Protein Homology CDS 373551 375542 . + 0 ID=cds-MHV1765383.1;Parent=gene-AC3ASX_09000;Dbxref=NCBI_GP:MHV1765383.1;Name=MHV1765383.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011648698.1;locus_tag=AC3ASX_09000;product=transketolase;protein_id=MHV1765383.1;transl_table=11 JBYLIA010000002.1 Genbank gene 375588 376589 . + . ID=gene-AC3ASX_09005;Name=gap;gbkey=Gene;gene=gap;gene_biotype=protein_coding;locus_tag=AC3ASX_09005 JBYLIA010000002.1 Protein Homology CDS 375588 376589 . + 0 ID=cds-MHV1765384.1;Parent=gene-AC3ASX_09005;Dbxref=NCBI_GP:MHV1765384.1;Name=MHV1765384.1;Ontology_term=GO:0006006,GO:0016620,GO:0050661,GO:0051287;gbkey=CDS;gene=gap;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,NADP binding|0050661||IEA,NAD binding|0051287||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012280713.1;locus_tag=AC3ASX_09005;product=type I glyceraldehyde-3-phosphate dehydrogenase;protein_id=MHV1765384.1;transl_table=11 JBYLIA010000002.1 Genbank gene 376608 377786 . + . ID=gene-AC3ASX_09010;Name=AC3ASX_09010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_09010 JBYLIA010000002.1 Protein Homology CDS 376608 377786 . + 0 ID=cds-MHV1765385.1;Parent=gene-AC3ASX_09010;Dbxref=NCBI_GP:MHV1765385.1;Name=MHV1765385.1;Ontology_term=GO:0006094,GO:0006096,GO:0000166,GO:0004618;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,phosphoglycerate kinase activity|0004618||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550052.1;locus_tag=AC3ASX_09010;product=phosphoglycerate kinase;protein_id=MHV1765385.1;transl_table=11 JBYLIA010000002.1 Genbank gene 377801 379237 . + . ID=gene-AC3ASX_09015;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=AC3ASX_09015 JBYLIA010000002.1 Protein Homology CDS 377801 379237 . + 0 ID=cds-MHV1765386.1;Parent=gene-AC3ASX_09015;Dbxref=NCBI_GP:MHV1765386.1;Name=MHV1765386.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714924.1;locus_tag=AC3ASX_09015;product=pyruvate kinase;protein_id=MHV1765386.1;transl_table=11 JBYLIA010000002.1 Genbank gene 379248 380312 . + . ID=gene-AC3ASX_09020;Name=fba;gbkey=Gene;gene=fba;gene_biotype=protein_coding;locus_tag=AC3ASX_09020 JBYLIA010000002.1 Protein Homology CDS 379248 380312 . + 0 ID=cds-MHV1765387.1;Parent=gene-AC3ASX_09020;Dbxref=NCBI_GP:MHV1765387.1;Name=MHV1765387.1;Note=catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle%2C glycolysis%2C and/or gluconeogenesis;Ontology_term=GO:0006096,GO:0004332;gbkey=CDS;gene=fba;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013922760.1;locus_tag=AC3ASX_09020;product=class II fructose-bisphosphate aldolase;protein_id=MHV1765387.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 380414 380970 . - . ID=gene-AC3ASX_09025;Name=AC3ASX_09025;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_09025;pseudo=true JBYLIA010000002.1 Protein Homology CDS 380414 380970 . - 0 ID=cds-AC3ASX_09025;Parent=gene-AC3ASX_09025;Note=frameshifted%3B internal stop;Ontology_term=GO:0005991,GO:0004555;gbkey=CDS;go_function=alpha%2Calpha-trehalase activity|0004555||IEA;go_process=trehalose metabolic process|0005991||IEA;inference=COORDINATES: protein motif:HMM:NF013377.7;locus_tag=AC3ASX_09025;product=trehalase family glycosidase;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 381238 381531 . - . ID=gene-AC3ASX_09030;Name=AC3ASX_09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_09030 JBYLIA010000002.1 GeneMarkS-2+ CDS 381238 381531 . - 0 ID=cds-MHV1765388.1;Parent=gene-AC3ASX_09030;Dbxref=NCBI_GP:MHV1765388.1;Name=MHV1765388.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_09030;product=transporter;protein_id=MHV1765388.1;transl_table=11 JBYLIA010000002.1 Genbank gene 381950 382216 . - . ID=gene-AC3ASX_09035;Name=AC3ASX_09035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_09035 JBYLIA010000002.1 GeneMarkS-2+ CDS 381950 382216 . - 0 ID=cds-MHV1765389.1;Parent=gene-AC3ASX_09035;Dbxref=NCBI_GP:MHV1765389.1;Name=MHV1765389.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_09035;product=hypothetical protein;protein_id=MHV1765389.1;transl_table=11 JBYLIA010000002.1 Genbank gene 382565 383710 . + . ID=gene-AC3ASX_09040;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=AC3ASX_09040 JBYLIA010000002.1 Protein Homology CDS 382565 383710 . + 0 ID=cds-MHV1765390.1;Parent=gene-AC3ASX_09040;Dbxref=NCBI_GP:MHV1765390.1;Name=MHV1765390.1;Ontology_term=GO:0006040,GO:0009254,GO:0016773;gbkey=CDS;gene=anmK;go_function=phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;go_process=amino sugar metabolic process|0006040||IEA,peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037143.1;locus_tag=AC3ASX_09040;product=anhydro-N-acetylmuramic acid kinase AnmK;protein_id=MHV1765390.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 383810 384506 . - . ID=gene-AC3ASX_09045;Name=AC3ASX_09045;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_09045;pseudo=true JBYLIA010000002.1 Protein Homology CDS 383810 384506 . - 0 ID=cds-AC3ASX_09045;Parent=gene-AC3ASX_09045;Note=frameshifted%3B internal stop%3B incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003019836.1;locus_tag=AC3ASX_09045;product=IS5 family transposase;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 384744 388722 . + . ID=gene-AC3ASX_09050;Name=AC3ASX_09050;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_09050;pseudo=true JBYLIA010000002.1 Protein Homology CDS 384744 388722 . + 0 ID=cds-AC3ASX_09050;Parent=gene-AC3ASX_09050;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018228.1;locus_tag=AC3ASX_09050;product=type VI secretion system effector PdpC;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 388860 389321 . + . ID=gene-AC3ASX_09055;Name=pdpE;gbkey=Gene;gene=pdpE;gene_biotype=protein_coding;locus_tag=AC3ASX_09055 JBYLIA010000002.1 Protein Homology CDS 388860 389321 . + 0 ID=cds-MHV1765391.1;Parent=gene-AC3ASX_09055;Dbxref=NCBI_GP:MHV1765391.1;Name=MHV1765391.1;gbkey=CDS;gene=pdpE;inference=COORDINATES: protein motif:HMM:NF041242.1;locus_tag=AC3ASX_09055;product=type VI secretion system protein PdpE;protein_id=MHV1765391.1;transl_table=11 JBYLIA010000002.1 Genbank gene 390059 390199 . + . ID=gene-AC3ASX_09060;Name=AC3ASX_09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_09060 JBYLIA010000002.1 GeneMarkS-2+ CDS 390059 390199 . + 0 ID=cds-MHV1765392.1;Parent=gene-AC3ASX_09060;Dbxref=NCBI_GP:MHV1765392.1;Name=MHV1765392.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_09060;product=hypothetical protein;protein_id=MHV1765392.1;transl_table=11 JBYLIA010000002.1 Genbank gene 390230 390352 . + . ID=gene-AC3ASX_09065;Name=AC3ASX_09065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_09065 JBYLIA010000002.1 Protein Homology CDS 390230 390352 . + 0 ID=cds-MHV1765393.1;Parent=gene-AC3ASX_09065;Dbxref=NCBI_GP:MHV1765393.1;Name=MHV1765393.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017416.7;locus_tag=AC3ASX_09065;product=transposase;protein_id=MHV1765393.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 390961 391701 . + . ID=gene-AC3ASX_09070;Name=AC3ASX_09070;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_09070;pseudo=true JBYLIA010000002.1 Protein Homology CDS 390961 391701 . + 0 ID=cds-AC3ASX_09070;Parent=gene-AC3ASX_09070;Note=frameshifted%3B incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076611417.1;locus_tag=AC3ASX_09070;product=IS982 family transposase;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 392506 392964 . - . ID=gene-AC3ASX_09075;Name=iglJ;gbkey=Gene;gene=iglJ;gene_biotype=protein_coding;locus_tag=AC3ASX_09075 JBYLIA010000002.1 Protein Homology CDS 392506 392964 . - 0 ID=cds-MHV1765394.1;Parent=gene-AC3ASX_09075;Dbxref=NCBI_GP:MHV1765394.1;Name=MHV1765394.1;gbkey=CDS;gene=iglJ;inference=COORDINATES: protein motif:HMM:NF041243.1;locus_tag=AC3ASX_09075;product=type VI secretion system baseplate protein IglJ;protein_id=MHV1765394.1;transl_table=11 JBYLIA010000002.1 Genbank gene 393289 393624 . - . ID=gene-AC3ASX_09080;Name=AC3ASX_09080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_09080 JBYLIA010000002.1 GeneMarkS-2+ CDS 393289 393624 . - 0 ID=cds-MHV1765395.1;Parent=gene-AC3ASX_09080;Dbxref=NCBI_GP:MHV1765395.1;Name=MHV1765395.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_09080;product=hypothetical protein;protein_id=MHV1765395.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 394193 394801 . - . ID=gene-AC3ASX_09085;Name=AC3ASX_09085;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_09085;pseudo=true JBYLIA010000002.1 Protein Homology CDS 394193 394801 . - 0 ID=cds-AC3ASX_09085;Parent=gene-AC3ASX_09085;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003040125.1;locus_tag=AC3ASX_09085;product=DotU family type IV/VI secretion system protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 394830 396255 . - . ID=gene-AC3ASX_09090;Name=iglH;gbkey=Gene;gene=iglH;gene_biotype=pseudogene;locus_tag=AC3ASX_09090;pseudo=true JBYLIA010000002.1 Protein Homology CDS 394830 396255 . - 0 ID=cds-AC3ASX_09090;Parent=gene-AC3ASX_09090;Note=frameshifted;gbkey=CDS;gene=iglH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014548668.1;locus_tag=AC3ASX_09090;product=type VI secretion system baseplate subunit TssF/IglH;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 396269 396792 . - . ID=gene-AC3ASX_09095;Name=iglG;gbkey=Gene;gene=iglG;gene_biotype=pseudogene;locus_tag=AC3ASX_09095;pseudo=true JBYLIA010000002.1 Protein Homology CDS 396269 396792 . - 0 ID=cds-AC3ASX_09095;Parent=gene-AC3ASX_09095;Note=frameshifted;gbkey=CDS;gene=iglG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003018233.1;locus_tag=AC3ASX_09095;product=type VI secretion system PAAR-like protein IglG;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 396907 397647 . - . ID=gene-AC3ASX_09100;Name=AC3ASX_09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_09100 JBYLIA010000002.1 GeneMarkS-2+ CDS 396907 397647 . - 0 ID=cds-MHV1765396.1;Parent=gene-AC3ASX_09100;Dbxref=NCBI_GP:MHV1765396.1;Name=MHV1765396.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_09100;product=hypothetical protein;protein_id=MHV1765396.1;transl_table=11 JBYLIA010000002.1 Genbank gene 397975 398526 . - . ID=gene-AC3ASX_09105;Name=AC3ASX_09105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_09105 JBYLIA010000002.1 GeneMarkS-2+ CDS 397975 398526 . - 0 ID=cds-MHV1765397.1;Parent=gene-AC3ASX_09105;Dbxref=NCBI_GP:MHV1765397.1;Name=MHV1765397.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_09105;product=hypothetical protein;protein_id=MHV1765397.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 398529 399024 . - . ID=gene-AC3ASX_09110;Name=tssI;gbkey=Gene;gene=tssI;gene_biotype=pseudogene;locus_tag=AC3ASX_09110;pseudo=true JBYLIA010000002.1 Protein Homology CDS 398529 399024 . - 0 ID=cds-AC3ASX_09110;Parent=gene-AC3ASX_09110;Note=frameshifted;gbkey=CDS;gene=tssI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011886467.1;locus_tag=AC3ASX_09110;product=type VI secretion system tip protein TssI/VgrG;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 399036 399407 . - . ID=gene-AC3ASX_09115;Name=iglE;gbkey=Gene;gene=iglE;gene_biotype=protein_coding;locus_tag=AC3ASX_09115 JBYLIA010000002.1 Protein Homology CDS 399036 399407 . - 0 ID=cds-MHV1765398.1;Parent=gene-AC3ASX_09115;Dbxref=NCBI_GP:MHV1765398.1;Name=MHV1765398.1;Ontology_term=GO:0033103;gbkey=CDS;gene=iglE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429583.1;locus_tag=AC3ASX_09115;product=type VI secretion system lipoprotein IglE;protein_id=MHV1765398.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 399397 402678 . - . ID=gene-AC3ASX_09120;Name=AC3ASX_09120;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_09120;pseudo=true JBYLIA010000002.1 Protein Homology CDS 399397 402678 . - 0 ID=cds-AC3ASX_09120;Parent=gene-AC3ASX_09120;Note=frameshifted%3B internal stop;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550041.1;locus_tag=AC3ASX_09120;product=hypothetical protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 402682 405135 . - . ID=gene-AC3ASX_09125;Name=AC3ASX_09125;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_09125;pseudo=true JBYLIA010000002.1 Protein Homology CDS 402682 405135 . - 0 ID=cds-AC3ASX_09125;Parent=gene-AC3ASX_09125;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339387.1;locus_tag=AC3ASX_09125;product=pathogenicity determinant protein PdpA1;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 405549 407083 . + . ID=gene-AC3ASX_09130;Name=AC3ASX_09130;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC3ASX_09130 JBYLIA010000002.1 cmsearch rRNA 405549 407083 . + . ID=rna-AC3ASX_09130;Parent=gene-AC3ASX_09130;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_09130;product=16S ribosomal RNA JBYLIA010000002.1 cmsearch exon 405549 407083 . + . ID=exon-AC3ASX_09130-1;Parent=rna-AC3ASX_09130;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_09130;product=16S ribosomal RNA JBYLIA010000002.1 Genbank gene 407180 407256 . + . ID=gene-AC3ASX_09135;Name=AC3ASX_09135;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_09135 JBYLIA010000002.1 tRNAscan-SE tRNA 407180 407256 . + . ID=rna-AC3ASX_09135;Parent=gene-AC3ASX_09135;anticodon=(pos:407214..407216);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_09135;product=tRNA-Ile JBYLIA010000002.1 tRNAscan-SE exon 407180 407256 . + . ID=exon-AC3ASX_09135-1;Parent=rna-AC3ASX_09135;anticodon=(pos:407214..407216);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_09135;product=tRNA-Ile JBYLIA010000002.1 Genbank gene 407271 407346 . + . ID=gene-AC3ASX_09140;Name=AC3ASX_09140;gbkey=Gene;gene_biotype=tRNA;locus_tag=AC3ASX_09140 JBYLIA010000002.1 tRNAscan-SE tRNA 407271 407346 . + . ID=rna-AC3ASX_09140;Parent=gene-AC3ASX_09140;anticodon=(pos:407304..407306);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_09140;product=tRNA-Ala JBYLIA010000002.1 tRNAscan-SE exon 407271 407346 . + . ID=exon-AC3ASX_09140-1;Parent=rna-AC3ASX_09140;anticodon=(pos:407304..407306);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=AC3ASX_09140;product=tRNA-Ala JBYLIA010000002.1 Genbank gene 407399 410287 . + . ID=gene-AC3ASX_09145;Name=AC3ASX_09145;gbkey=Gene;gene_biotype=rRNA;locus_tag=AC3ASX_09145 JBYLIA010000002.1 cmsearch rRNA 407399 410287 . + . ID=rna-AC3ASX_09145;Parent=gene-AC3ASX_09145;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_09145;product=23S ribosomal RNA JBYLIA010000002.1 cmsearch exon 407399 410287 . + . ID=exon-AC3ASX_09145-1;Parent=rna-AC3ASX_09145;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_09145;product=23S ribosomal RNA JBYLIA010000002.1 Genbank gene 410335 410449 . + . ID=gene-AC3ASX_09150;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=AC3ASX_09150 JBYLIA010000002.1 cmsearch rRNA 410335 410449 . + . ID=rna-AC3ASX_09150;Parent=gene-AC3ASX_09150;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_09150;product=5S ribosomal RNA JBYLIA010000002.1 cmsearch exon 410335 410449 . + . ID=exon-AC3ASX_09150-1;Parent=rna-AC3ASX_09150;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=AC3ASX_09150;product=5S ribosomal RNA JBYLIA010000002.1 Genbank gene 410776 410931 . - . ID=gene-AC3ASX_09155;Name=AC3ASX_09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_09155 JBYLIA010000002.1 GeneMarkS-2+ CDS 410776 410931 . - 0 ID=cds-MHV1765399.1;Parent=gene-AC3ASX_09155;Dbxref=NCBI_GP:MHV1765399.1;Name=MHV1765399.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_09155;product=hypothetical protein;protein_id=MHV1765399.1;transl_table=11 JBYLIA010000002.1 Genbank gene 411058 412254 . + . ID=gene-AC3ASX_09160;Name=AC3ASX_09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_09160 JBYLIA010000002.1 Protein Homology CDS 411058 412254 . + 0 ID=cds-MHV1765400.1;Parent=gene-AC3ASX_09160;Dbxref=NCBI_GP:MHV1765400.1;Name=MHV1765400.1;Ontology_term=GO:0003333,GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transmembrane transport|0003333||IEA,amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003017441.1;locus_tag=AC3ASX_09160;product=amino acid permease;protein_id=MHV1765400.1;transl_table=11 JBYLIA010000002.1 Genbank gene 412330 413334 . + . ID=gene-AC3ASX_09165;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=AC3ASX_09165 JBYLIA010000002.1 Protein Homology CDS 412330 413334 . + 0 ID=cds-MHV1765401.1;Parent=gene-AC3ASX_09165;Dbxref=NCBI_GP:MHV1765401.1;Name=MHV1765401.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003024472.1;locus_tag=AC3ASX_09165;product=Obg family GTPase CgtA;protein_id=MHV1765401.1;transl_table=11 JBYLIA010000002.1 Genbank gene 413341 415215 . + . ID=gene-AC3ASX_09170;Name=AC3ASX_09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_09170 JBYLIA010000002.1 Protein Homology CDS 413341 415215 . + 0 ID=cds-MHV1765402.1;Parent=gene-AC3ASX_09170;Dbxref=NCBI_GP:MHV1765402.1;Name=MHV1765402.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022708.1;locus_tag=AC3ASX_09170;product=APC family permease;protein_id=MHV1765402.1;transl_table=11 JBYLIA010000002.1 Genbank gene 415216 415485 . + . ID=gene-AC3ASX_09175;Name=AC3ASX_09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_09175 JBYLIA010000002.1 GeneMarkS-2+ CDS 415216 415485 . + 0 ID=cds-MHV1765403.1;Parent=gene-AC3ASX_09175;Dbxref=NCBI_GP:MHV1765403.1;Name=MHV1765403.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_09175;product=hypothetical protein;protein_id=MHV1765403.1;transl_table=11 JBYLIA010000002.1 Genbank gene 416050 416553 . + . ID=gene-AC3ASX_09180;Name=AC3ASX_09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_09180 JBYLIA010000002.1 GeneMarkS-2+ CDS 416050 416553 . + 0 ID=cds-MHV1765404.1;Parent=gene-AC3ASX_09180;Dbxref=NCBI_GP:MHV1765404.1;Name=MHV1765404.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_09180;product=hypothetical protein;protein_id=MHV1765404.1;transl_table=11 JBYLIA010000002.1 Genbank gene 416557 416847 . + . ID=gene-AC3ASX_09185;Name=AC3ASX_09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_09185 JBYLIA010000002.1 GeneMarkS-2+ CDS 416557 416847 . + 0 ID=cds-MHV1765405.1;Parent=gene-AC3ASX_09185;Dbxref=NCBI_GP:MHV1765405.1;Name=MHV1765405.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_09185;product=P-loop NTPase family protein;protein_id=MHV1765405.1;transl_table=11 JBYLIA010000002.1 Genbank gene 416837 418261 . - . ID=gene-AC3ASX_09190;Name=nhaD;gbkey=Gene;gene=nhaD;gene_biotype=protein_coding;locus_tag=AC3ASX_09190 JBYLIA010000002.1 Protein Homology CDS 416837 418261 . - 0 ID=cds-MHV1765406.1;Parent=gene-AC3ASX_09190;Dbxref=NCBI_GP:MHV1765406.1;Name=MHV1765406.1;Ontology_term=GO:0006814,GO:0015297;gbkey=CDS;gene=nhaD;go_function=antiporter activity|0015297||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429896.1;locus_tag=AC3ASX_09190;product=sodium:proton antiporter NhaD;protein_id=MHV1765406.1;transl_table=11 JBYLIA010000002.1 Genbank gene 418435 419622 . + . ID=gene-AC3ASX_09195;Name=AC3ASX_09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_09195 JBYLIA010000002.1 Protein Homology CDS 418435 419622 . + 0 ID=cds-MHV1765407.1;Parent=gene-AC3ASX_09195;Dbxref=NCBI_GP:MHV1765407.1;Name=MHV1765407.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004340008.1;locus_tag=AC3ASX_09195;product=multidrug effflux MFS transporter;protein_id=MHV1765407.1;transl_table=11 JBYLIA010000002.1 Genbank gene 419677 420042 . - . ID=gene-AC3ASX_09200;Name=AC3ASX_09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_09200 JBYLIA010000002.1 Protein Homology CDS 419677 420042 . - 0 ID=cds-MHV1765408.1;Parent=gene-AC3ASX_09200;Dbxref=NCBI_GP:MHV1765408.1;Name=MHV1765408.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF012360.7;locus_tag=AC3ASX_09200;product=LbetaH domain-containing protein;protein_id=MHV1765408.1;transl_table=11 JBYLIA010000002.1 Genbank gene 420294 421646 . - . ID=gene-AC3ASX_09205;Name=trhP;gbkey=Gene;gene=trhP;gene_biotype=protein_coding;gene_synonym=yegQ;locus_tag=AC3ASX_09205 JBYLIA010000002.1 Protein Homology CDS 420294 421646 . - 0 ID=cds-MHV1765409.1;Parent=gene-AC3ASX_09205;Dbxref=NCBI_GP:MHV1765409.1;Name=MHV1765409.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhP;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014714572.1;locus_tag=AC3ASX_09205;product=prephenate-dependent tRNA uridine(34) hydroxylase TrhP;protein_id=MHV1765409.1;transl_table=11 JBYLIA010000002.1 Genbank gene 422018 422638 . + . ID=gene-AC3ASX_09210;Name=AC3ASX_09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_09210 JBYLIA010000002.1 Protein Homology CDS 422018 422638 . + 0 ID=cds-MHV1765410.1;Parent=gene-AC3ASX_09210;Dbxref=NCBI_GP:MHV1765410.1;Name=MHV1765410.1;Ontology_term=GO:0030091,GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein repair|0030091||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012429894.1;locus_tag=AC3ASX_09210;product=protein-L-isoaspartate O-methyltransferase family protein;protein_id=MHV1765410.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 422647 424175 . + . ID=gene-AC3ASX_09215;Name=AC3ASX_09215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_09215;pseudo=true JBYLIA010000002.1 Protein Homology CDS 422647 424175 . + 0 ID=cds-AC3ASX_09215;Parent=gene-AC3ASX_09215;Note=frameshifted;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022695.1;locus_tag=AC3ASX_09215;product=TolC family protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 424184 424825 . + . ID=gene-AC3ASX_09220;Name=AC3ASX_09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_09220 JBYLIA010000002.1 Protein Homology CDS 424184 424825 . + 0 ID=cds-MHV1765411.1;Parent=gene-AC3ASX_09220;Dbxref=NCBI_GP:MHV1765411.1;Name=MHV1765411.1;Ontology_term=GO:0008897;gbkey=CDS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014550301.1;locus_tag=AC3ASX_09220;product=4'-phosphopantetheinyl transferase family protein;protein_id=MHV1765411.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 424836 426185 . + . ID=gene-AC3ASX_09225;Name=gad;gbkey=Gene;gene=gad;gene_biotype=pseudogene;locus_tag=AC3ASX_09225;pseudo=true JBYLIA010000002.1 Protein Homology CDS 424836 426185 . + 0 ID=cds-AC3ASX_09225;Parent=gene-AC3ASX_09225;Note=frameshifted%3B internal stop;Ontology_term=GO:0006540,GO:0004351,GO:0030170;gbkey=CDS;gene=gad;go_function=glutamate decarboxylase activity|0004351||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=GABA shunt|0006540||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339999.1;locus_tag=AC3ASX_09225;product=glutamate decarboxylase;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 426278 427774 . + . ID=gene-AC3ASX_09230;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=AC3ASX_09230 JBYLIA010000002.1 Protein Homology CDS 426278 427774 . + 0 ID=cds-MHV1765412.1;Parent=gene-AC3ASX_09230;Dbxref=NCBI_GP:MHV1765412.1;Name=MHV1765412.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004578527.1;locus_tag=AC3ASX_09230;product=amidophosphoribosyltransferase;protein_id=MHV1765412.1;transl_table=11 JBYLIA010000002.1 Genbank gene 427767 431636 . + . ID=gene-AC3ASX_09235;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=AC3ASX_09235 JBYLIA010000002.1 Protein Homology CDS 427767 431636 . + 0 ID=cds-MHV1765413.1;Parent=gene-AC3ASX_09235;Dbxref=NCBI_GP:MHV1765413.1;Name=MHV1765413.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022688.1;locus_tag=AC3ASX_09235;product=phosphoribosylformylglycinamidine synthase;protein_id=MHV1765413.1;transl_table=11 JBYLIA010000002.1 Genbank pseudogene 432931 433772 . + . ID=gene-AC3ASX_09240;Name=AC3ASX_09240;gbkey=Gene;gene_biotype=pseudogene;locus_tag=AC3ASX_09240;pseudo=true JBYLIA010000002.1 Protein Homology CDS 432931 433772 . + 0 ID=cds-AC3ASX_09240;Parent=gene-AC3ASX_09240;Note=frameshifted%3B internal stop;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004339034.1;locus_tag=AC3ASX_09240;product=aldose epimerase family protein;pseudo=true;transl_table=11 JBYLIA010000002.1 Genbank gene 434374 434496 . - . ID=gene-AC3ASX_09245;Name=AC3ASX_09245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=AC3ASX_09245 JBYLIA010000002.1 GeneMarkS-2+ CDS 434374 434496 . - 0 ID=cds-MHV1765414.1;Parent=gene-AC3ASX_09245;Dbxref=NCBI_GP:MHV1765414.1;Name=MHV1765414.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=AC3ASX_09245;product=hypothetical protein;protein_id=MHV1765414.1;transl_table=11 JBYLIA010000002.1 Genbank gene 434808 435813 . + . ID=gene-AC3ASX_09250;Name=purB;end_range=435813,.;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=AC3ASX_09250;partial=true JBYLIA010000002.1 Protein Homology CDS 434808 435813 . + 0 ID=cds-MHV1765415.1;Parent=gene-AC3ASX_09250;Dbxref=NCBI_GP:MHV1765415.1;Name=MHV1765415.1;Ontology_term=GO:0009152,GO:0004018;end_range=435813,.;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003022846.1;locus_tag=AC3ASX_09250;partial=true;product=adenylosuccinate lyase;protein_id=MHV1765415.1;transl_table=11 ###