##gff-version 3 #!gff-spec-version 1.21 #!processor NCBI annotwriter #!genome-build ASM2153328v1 #!genome-build-accession NCBI_Assembly:GCF_021533285.1 #!annotation-date 01/26/2026 11:05:22 #!annotation-source NCBI RefSeq GCF_021533285.1-RS_2026_01_26 ##sequence-region NZ_JAIKUA010000001.1 1 28780 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000001.1 RefSeq region 1 28780 . + . ID=NZ_JAIKUA010000001.1:1..28780;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000001.1 RefSeq gene 86 697 . - . ID=gene-L2557_RS00005;Name=ybjG;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=L2557_RS00005 NZ_JAIKUA010000001.1 Protein Homology CDS 86 697 . - 0 ID=cds-WP_075672495.1;Parent=gene-L2557_RS00005;Dbxref=GenBank:WP_075672495.1;Name=WP_075672495.1;Ontology_term=GO:0050380,GO:0005886;gbkey=CDS;gene=ybjG;go_component=plasma membrane|0005886||IEA;go_function=undecaprenyl-diphosphatase activity|0050380||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247606.1;locus_tag=L2557_RS00005;product=undecaprenyl-diphosphate phosphatase;protein_id=WP_075672495.1;transl_table=11 NZ_JAIKUA010000001.1 RefSeq gene 937 1362 . + . ID=gene-L2557_RS00010;Name=L2557_RS00010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00010 NZ_JAIKUA010000001.1 Protein Homology CDS 937 1362 . + 0 ID=cds-WP_099659782.1;Parent=gene-L2557_RS00010;Dbxref=GenBank:WP_099659782.1;Name=WP_099659782.1;Ontology_term=GO:0003824,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244540.1;locus_tag=L2557_RS00010;product=secondary thiamine-phosphate synthase enzyme YjbQ;protein_id=WP_099659782.1;transl_table=11 NZ_JAIKUA010000001.1 RefSeq gene 1615 1878 . - . ID=gene-L2557_RS00015;Name=L2557_RS00015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00015 NZ_JAIKUA010000001.1 Protein Homology CDS 1615 1878 . - 0 ID=cds-WP_099659781.1;Parent=gene-L2557_RS00015;Dbxref=GenBank:WP_099659781.1;Name=WP_099659781.1;Ontology_term=GO:0045454,GO:0009055,GO:0015035;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459849.1;locus_tag=L2557_RS00015;product=GrxA family glutaredoxin;protein_id=WP_099659781.1;transl_table=11 NZ_JAIKUA010000001.1 RefSeq gene 2049 2351 . + . ID=gene-L2557_RS00020;Name=L2557_RS00020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00020 NZ_JAIKUA010000001.1 Protein Homology CDS 2049 2351 . + 0 ID=cds-WP_099659780.1;Parent=gene-L2557_RS00020;Dbxref=GenBank:WP_099659780.1;Name=WP_099659780.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247610.1;locus_tag=L2557_RS00020;product=YbjC family protein;protein_id=WP_099659780.1;transl_table=11 NZ_JAIKUA010000001.1 RefSeq gene 2518 3036 . + . ID=gene-L2557_RS00025;Name=L2557_RS00025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00025 NZ_JAIKUA010000001.1 Protein Homology CDS 2518 3036 . + 0 ID=cds-WP_075672487.1;Parent=gene-L2557_RS00025;Dbxref=GenBank:WP_075672487.1;Name=WP_075672487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367695.1;locus_tag=L2557_RS00025;product=type III secretion system chaperone family protein;protein_id=WP_075672487.1;transl_table=11 NZ_JAIKUA010000001.1 RefSeq gene 3067 4200 . + . ID=gene-L2557_RS00030;Name=rlmC;gbkey=Gene;gene=rlmC;gene_biotype=protein_coding;locus_tag=L2557_RS00030 NZ_JAIKUA010000001.1 Protein Homology CDS 3067 4200 . + 0 ID=cds-WP_075672485.1;Parent=gene-L2557_RS00030;Dbxref=GenBank:WP_075672485.1;Name=WP_075672485.1;Ontology_term=GO:0000154,GO:0016070,GO:0008649;gbkey=CDS;gene=rlmC;go_function=rRNA methyltransferase activity|0008649||IEA;go_process=rRNA modification|0000154||IEA,RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252051.1;locus_tag=L2557_RS00030;product=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC;protein_id=WP_075672485.1;transl_table=11 NZ_JAIKUA010000001.1 RefSeq gene 4306 5505 . + . ID=gene-L2557_RS00035;Name=L2557_RS00035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00035 NZ_JAIKUA010000001.1 Protein Homology CDS 4306 5505 . + 0 ID=cds-WP_075672483.1;Parent=gene-L2557_RS00035;Dbxref=GenBank:WP_075672483.1;Name=WP_075672483.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812664.1;locus_tag=L2557_RS00035;product=multidrug effflux MFS transporter;protein_id=WP_075672483.1;transl_table=11 NZ_JAIKUA010000001.1 RefSeq gene 5600 6268 . - . ID=gene-L2557_RS00040;Name=artM;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=L2557_RS00040 NZ_JAIKUA010000001.1 Protein Homology CDS 5600 6268 . - 0 ID=cds-WP_075672481.1;Parent=gene-L2557_RS00040;Dbxref=GenBank:WP_075672481.1;Name=WP_075672481.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artM;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244548.1;locus_tag=L2557_RS00040;product=arginine ABC transporter permease ArtM;protein_id=WP_075672481.1;transl_table=11 NZ_JAIKUA010000001.1 RefSeq gene 6268 6972 . - . ID=gene-L2557_RS00045;Name=artQ;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=L2557_RS00045 NZ_JAIKUA010000001.1 Protein Homology CDS 6268 6972 . - 0 ID=cds-WP_075672479.1;Parent=gene-L2557_RS00045;Dbxref=GenBank:WP_075672479.1;Name=WP_075672479.1;Ontology_term=GO:0055085,GO:0071705,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=artQ;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA,nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244549.1;locus_tag=L2557_RS00045;product=arginine ABC transporter permease ArtQ;protein_id=WP_075672479.1;transl_table=11 NZ_JAIKUA010000001.1 RefSeq gene 6990 7724 . - . ID=gene-L2557_RS00050;Name=artJ;gbkey=Gene;gene=artJ;gene_biotype=protein_coding;locus_tag=L2557_RS00050 NZ_JAIKUA010000001.1 Protein Homology CDS 6990 7724 . - 0 ID=cds-WP_023581291.1;Parent=gene-L2557_RS00050;Dbxref=GenBank:WP_023581291.1;Name=WP_023581291.1;gbkey=CDS;gene=artJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537476.1;locus_tag=L2557_RS00050;product=arginine ABC transporter substrate-binding protein;protein_id=WP_023581291.1;transl_table=11 NZ_JAIKUA010000001.1 RefSeq gene 7739 8467 . - . ID=gene-L2557_RS00055;Name=artP;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=L2557_RS00055 NZ_JAIKUA010000001.1 Protein Homology CDS 7739 8467 . - 0 ID=cds-WP_075672552.1;Parent=gene-L2557_RS00055;Dbxref=GenBank:WP_075672552.1;Name=WP_075672552.1;Ontology_term=GO:0003333,GO:0005524,GO:0015424,GO:0043190;gbkey=CDS;gene=artP;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742668.1;locus_tag=L2557_RS00055;product=arginine ABC transporter ATP-binding protein ArtP;protein_id=WP_075672552.1;transl_table=11 NZ_JAIKUA010000001.1 RefSeq gene 8580 10037 . - . ID=gene-L2557_RS00060;Name=L2557_RS00060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00060 NZ_JAIKUA010000001.1 Protein Homology CDS 8580 10037 . - 0 ID=cds-WP_099659779.1;Parent=gene-L2557_RS00060;Dbxref=GenBank:WP_099659779.1;Name=WP_099659779.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827732.1;locus_tag=L2557_RS00060;product=DUF2867 domain-containing protein;protein_id=WP_099659779.1;transl_table=11 NZ_JAIKUA010000001.1 RefSeq gene 10090 10992 . - . ID=gene-L2557_RS00065;Name=L2557_RS00065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00065 NZ_JAIKUA010000001.1 Protein Homology CDS 10090 10992 . - 0 ID=cds-WP_075672475.1;Parent=gene-L2557_RS00065;Dbxref=GenBank:WP_075672475.1;Name=WP_075672475.1;Ontology_term=GO:1903401,GO:0015661;gbkey=CDS;go_function=L-lysine efflux transmembrane transporter activity|0015661||IEA;go_process=L-lysine transmembrane transport|1903401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244553.1;locus_tag=L2557_RS00065;product=LysO family transporter;protein_id=WP_075672475.1;transl_table=11 NZ_JAIKUA010000001.1 RefSeq gene 11335 13011 . + . ID=gene-L2557_RS00070;Name=L2557_RS00070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00070 NZ_JAIKUA010000001.1 Protein Homology CDS 11335 13011 . + 0 ID=cds-WP_099659778.1;Parent=gene-L2557_RS00070;Dbxref=GenBank:WP_099659778.1;Name=WP_099659778.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244554.1;locus_tag=L2557_RS00070;product=ATP-dependent nuclease;protein_id=WP_099659778.1;transl_table=11 NZ_JAIKUA010000001.1 RefSeq gene 13140 14249 . + . ID=gene-L2557_RS00075;Name=macA;gbkey=Gene;gene=macA;gene_biotype=protein_coding;locus_tag=L2557_RS00075 NZ_JAIKUA010000001.1 Protein Homology CDS 13140 14249 . + 0 ID=cds-WP_075672471.1;Parent=gene-L2557_RS00075;Dbxref=GenBank:WP_075672471.1;Name=WP_075672471.1;Ontology_term=GO:1990961,GO:0022857,GO:0019898,GO:1990195;gbkey=CDS;gene=macA;go_component=extrinsic component of membrane|0019898||IEA,macrolide transmembrane transporter complex|1990195||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367700.1;locus_tag=L2557_RS00075;product=macrolide transporter subunit MacA;protein_id=WP_075672471.1;transl_table=11 NZ_JAIKUA010000001.1 RefSeq gene 14249 16195 . + . ID=gene-L2557_RS00080;Name=macB;gbkey=Gene;gene=macB;gene_biotype=protein_coding;locus_tag=L2557_RS00080 NZ_JAIKUA010000001.1 Protein Homology CDS 14249 16195 . + 0 ID=cds-WP_075672469.1;Parent=gene-L2557_RS00080;Dbxref=GenBank:WP_075672469.1;Name=WP_075672469.1;Ontology_term=GO:0005524,GO:0022857,GO:1990195;gbkey=CDS;gene=macB;go_component=macrolide transmembrane transporter complex|1990195||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004710702.1;locus_tag=L2557_RS00080;product=macrolide ABC transporter ATP-binding protein/permease MacB;protein_id=WP_075672469.1;transl_table=11 NZ_JAIKUA010000001.1 RefSeq gene 16335 16544 . - . ID=gene-L2557_RS00085;Name=cspD;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=L2557_RS00085 NZ_JAIKUA010000001.1 Protein Homology CDS 16335 16544 . - 0 ID=cds-WP_023581298.1;Parent=gene-L2557_RS00085;Dbxref=GenBank:WP_023581298.1;Name=WP_023581298.1;Ontology_term=GO:0006355,GO:0003676,GO:0005737;gbkey=CDS;gene=cspD;go_component=cytoplasm|0005737||IEA;go_function=nucleic acid binding|0003676||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244557.1;locus_tag=L2557_RS00085;product=cold shock domain-containing protein CspD;protein_id=WP_023581298.1;transl_table=11 NZ_JAIKUA010000001.1 RefSeq gene 16833 17147 . + . ID=gene-L2557_RS00090;Name=clpS;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=L2557_RS00090 NZ_JAIKUA010000001.1 Protein Homology CDS 16833 17147 . + 0 ID=cds-WP_075672467.1;Parent=gene-L2557_RS00090;Dbxref=GenBank:WP_075672467.1;Name=WP_075672467.1;Ontology_term=GO:0006508;gbkey=CDS;gene=clpS;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244558.1;locus_tag=L2557_RS00090;product=ATP-dependent Clp protease adapter ClpS;protein_id=WP_075672467.1;transl_table=11 NZ_JAIKUA010000001.1 RefSeq gene 17178 19469 . + . ID=gene-L2557_RS00095;Name=clpA;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=L2557_RS00095 NZ_JAIKUA010000001.1 Protein Homology CDS 17178 19469 . + 0 ID=cds-WP_075672465.1;Parent=gene-L2557_RS00095;Dbxref=GenBank:WP_075672465.1;Name=WP_075672465.1;Ontology_term=GO:0043335,GO:0005524,GO:0016887;gbkey=CDS;gene=clpA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein unfolding|0043335||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244559.1;locus_tag=L2557_RS00095;product=ATP-dependent Clp protease ATP-binding subunit ClpA;protein_id=WP_075672465.1;transl_table=11 NZ_JAIKUA010000001.1 RefSeq gene 19592 19810 . - . ID=gene-L2557_RS00100;Name=infA;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=L2557_RS00100 NZ_JAIKUA010000001.1 Protein Homology CDS 19592 19810 . - 0 ID=cds-WP_004244560.1;Parent=gene-L2557_RS00100;Dbxref=GenBank:WP_004244560.1;Name=WP_004244560.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infA;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001040186.1;locus_tag=L2557_RS00100;product=translation initiation factor IF-1;protein_id=WP_004244560.1;transl_table=11 NZ_JAIKUA010000001.1 RefSeq gene 20150 20842 . - . ID=gene-L2557_RS00105;Name=aat;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=L2557_RS00105 NZ_JAIKUA010000001.1 Protein Homology CDS 20150 20842 . - 0 ID=cds-WP_099659777.1;Parent=gene-L2557_RS00105;Dbxref=GenBank:WP_099659777.1;Name=WP_099659777.1;Ontology_term=GO:0006508,GO:0008914;gbkey=CDS;gene=aat;go_function=leucyl-tRNA--protein transferase activity|0008914||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247616.1;locus_tag=L2557_RS00105;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=WP_099659777.1;transl_table=11 NZ_JAIKUA010000001.1 RefSeq gene 20844 22595 . - . ID=gene-L2557_RS00110;Name=cydC;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=L2557_RS00110 NZ_JAIKUA010000001.1 Protein Homology CDS 20844 22595 . - 0 ID=cds-WP_235409710.1;Parent=gene-L2557_RS00110;Dbxref=GenBank:WP_235409710.1;Name=WP_235409710.1;Ontology_term=GO:0045454,GO:0005524,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;gene=cydC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252037.1;locus_tag=L2557_RS00110;product=heme ABC transporter ATP-binding protein/permease CydC;protein_id=WP_235409710.1;transl_table=11 NZ_JAIKUA010000001.1 RefSeq gene 22598 24367 . - . ID=gene-L2557_RS00115;Name=cydD;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=L2557_RS00115 NZ_JAIKUA010000001.1 Protein Homology CDS 22598 24367 . - 0 ID=cds-WP_159241899.1;Parent=gene-L2557_RS00115;Dbxref=GenBank:WP_159241899.1;Name=WP_159241899.1;Ontology_term=GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;gene=cydD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816031.1;locus_tag=L2557_RS00115;product=heme ABC transporter permease/ATP-binding protein CydD;protein_id=WP_159241899.1;transl_table=11 NZ_JAIKUA010000001.1 RefSeq gene 24509 25468 . - . ID=gene-L2557_RS00120;Name=trxB;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=L2557_RS00120 NZ_JAIKUA010000001.1 Protein Homology CDS 24509 25468 . - 0 ID=cds-WP_235409711.1;Parent=gene-L2557_RS00120;Dbxref=GenBank:WP_235409711.1;Name=WP_235409711.1;Ontology_term=GO:0019430,GO:0004791;gbkey=CDS;gene=trxB;go_function=thioredoxin-disulfide reductase (NADPH) activity|0004791||IEA;go_process=removal of superoxide radicals|0019430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252032.1;locus_tag=L2557_RS00120;product=thioredoxin-disulfide reductase;protein_id=WP_235409711.1;transl_table=11 NZ_JAIKUA010000001.1 RefSeq gene 26013 26507 . + . ID=gene-L2557_RS00125;Name=lrp;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=L2557_RS00125 NZ_JAIKUA010000001.1 Protein Homology CDS 26013 26507 . + 0 ID=cds-WP_004244566.1;Parent=gene-L2557_RS00125;Dbxref=GenBank:WP_004244566.1;Name=WP_004244566.1;gbkey=CDS;gene=lrp;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001591745.1;locus_tag=L2557_RS00125;product=leucine-responsive transcriptional regulator Lrp;protein_id=WP_004244566.1;transl_table=11 NZ_JAIKUA010000001.1 RefSeq gene 26640 28780 . + . ID=gene-L2557_RS00130;Name=L2557_RS00130;end_range=28780,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00130;partial=true NZ_JAIKUA010000001.1 Protein Homology CDS 26640 28780 . + 0 ID=cds-WP_235409712.1;Parent=gene-L2557_RS00130;Dbxref=GenBank:WP_235409712.1;Name=WP_235409712.1;end_range=28780,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367705.1;locus_tag=L2557_RS00130;partial=true;product=DNA translocase FtsK 4TM domain-containing protein;protein_id=WP_235409712.1;transl_table=11 ##sequence-region NZ_JAIKUA010000010.1 1 24248 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000010.1 RefSeq region 1 24248 . + . ID=NZ_JAIKUA010000010.1:1..24248;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000010.1 RefSeq gene 433 852 . + . ID=gene-L2557_RS00755;Name=L2557_RS00755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00755 NZ_JAIKUA010000010.1 GeneMarkS-2+ CDS 433 852 . + 0 ID=cds-WP_156733931.1;Parent=gene-L2557_RS00755;Dbxref=GenBank:WP_156733931.1;Name=WP_156733931.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS00755;product=hypothetical protein;protein_id=WP_156733931.1;transl_table=11 NZ_JAIKUA010000010.1 RefSeq gene 889 1383 . - . ID=gene-L2557_RS00760;Name=L2557_RS00760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00760 NZ_JAIKUA010000010.1 Protein Homology CDS 889 1383 . - 0 ID=cds-WP_156733929.1;Parent=gene-L2557_RS00760;Dbxref=GenBank:WP_156733929.1;Name=WP_156733929.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033230.2;locus_tag=L2557_RS00760;product=ECs1072 family phage-associated protein;protein_id=WP_156733929.1;transl_table=11 NZ_JAIKUA010000010.1 RefSeq gene 1791 2327 . + . ID=gene-L2557_RS00765;Name=L2557_RS00765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00765 NZ_JAIKUA010000010.1 Protein Homology CDS 1791 2327 . + 0 ID=cds-WP_156733927.1;Parent=gene-L2557_RS00765;Dbxref=GenBank:WP_156733927.1;Name=WP_156733927.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001108577.1;locus_tag=L2557_RS00765;product=Rha family transcriptional regulator;protein_id=WP_156733927.1;transl_table=11 NZ_JAIKUA010000010.1 RefSeq gene 2443 2937 . + . ID=gene-L2557_RS00770;Name=L2557_RS00770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00770 NZ_JAIKUA010000010.1 Protein Homology CDS 2443 2937 . + 0 ID=cds-WP_156733925.1;Parent=gene-L2557_RS00770;Dbxref=GenBank:WP_156733925.1;Name=WP_156733925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247867.1;locus_tag=L2557_RS00770;product=DUF1441 family protein;protein_id=WP_156733925.1;transl_table=11 NZ_JAIKUA010000010.1 RefSeq gene 2934 5036 . + . ID=gene-L2557_RS00775;Name=L2557_RS00775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00775 NZ_JAIKUA010000010.1 Protein Homology CDS 2934 5036 . + 0 ID=cds-WP_156733923.1;Parent=gene-L2557_RS00775;Dbxref=GenBank:WP_156733923.1;Name=WP_156733923.1;Ontology_term=GO:0004519,GO:0005524,GO:0016887;gbkey=CDS;go_function=endonuclease activity|0004519||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001145097.1;locus_tag=L2557_RS00775;product=phage terminase large subunit family protein;protein_id=WP_156733923.1;transl_table=11 NZ_JAIKUA010000010.1 RefSeq gene 5033 5248 . + . ID=gene-L2557_RS00780;Name=L2557_RS00780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00780 NZ_JAIKUA010000010.1 Protein Homology CDS 5033 5248 . + 0 ID=cds-WP_004247869.1;Parent=gene-L2557_RS00780;Dbxref=GenBank:WP_004247869.1;Name=WP_004247869.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247869.1;locus_tag=L2557_RS00780;product=hypothetical protein;protein_id=WP_004247869.1;transl_table=11 NZ_JAIKUA010000010.1 RefSeq gene 5245 6735 . + . ID=gene-L2557_RS00785;Name=L2557_RS00785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00785 NZ_JAIKUA010000010.1 Protein Homology CDS 5245 6735 . + 0 ID=cds-WP_156733921.1;Parent=gene-L2557_RS00785;Dbxref=GenBank:WP_156733921.1;Name=WP_156733921.1;Ontology_term=GO:0019068,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=virion assembly|0019068||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247870.1;locus_tag=L2557_RS00785;product=phage portal protein;protein_id=WP_156733921.1;transl_table=11 NZ_JAIKUA010000010.1 RefSeq gene 6701 8692 . + . ID=gene-L2557_RS00790;Name=L2557_RS00790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00790 NZ_JAIKUA010000010.1 Protein Homology CDS 6701 8692 . + 0 ID=cds-WP_156733919.1;Parent=gene-L2557_RS00790;Dbxref=GenBank:WP_156733919.1;Name=WP_156733919.1;Ontology_term=GO:0019082,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=viral protein processing|0019082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247871.1;locus_tag=L2557_RS00790;product=ClpP-like prohead protease/major capsid protein fusion protein;protein_id=WP_156733919.1;transl_table=11 NZ_JAIKUA010000010.1 RefSeq gene 8781 9122 . + . ID=gene-L2557_RS00795;Name=L2557_RS00795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00795 NZ_JAIKUA010000010.1 Protein Homology CDS 8781 9122 . + 0 ID=cds-WP_156733917.1;Parent=gene-L2557_RS00795;Dbxref=GenBank:WP_156733917.1;Name=WP_156733917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247872.1;locus_tag=L2557_RS00795;product=DUF2190 family protein;protein_id=WP_156733917.1;transl_table=11 NZ_JAIKUA010000010.1 RefSeq gene 9134 9406 . + . ID=gene-L2557_RS00800;Name=L2557_RS00800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00800 NZ_JAIKUA010000010.1 Protein Homology CDS 9134 9406 . + 0 ID=cds-WP_156733915.1;Parent=gene-L2557_RS00800;Dbxref=GenBank:WP_156733915.1;Name=WP_156733915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247873.1;locus_tag=L2557_RS00800;product=ATP-binding protein;protein_id=WP_156733915.1;transl_table=11 NZ_JAIKUA010000010.1 RefSeq gene 9416 9979 . + . ID=gene-L2557_RS00805;Name=L2557_RS00805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00805 NZ_JAIKUA010000010.1 Protein Homology CDS 9416 9979 . + 0 ID=cds-WP_156733913.1;Parent=gene-L2557_RS00805;Dbxref=GenBank:WP_156733913.1;Name=WP_156733913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247875.1;locus_tag=L2557_RS00805;product=phage tail protein;protein_id=WP_156733913.1;transl_table=11 NZ_JAIKUA010000010.1 RefSeq gene 9979 10374 . + . ID=gene-L2557_RS00810;Name=gpU;gbkey=Gene;gene=gpU;gene_biotype=protein_coding;locus_tag=L2557_RS00810 NZ_JAIKUA010000010.1 Protein Homology CDS 9979 10374 . + 0 ID=cds-WP_164530211.1;Parent=gene-L2557_RS00810;Dbxref=GenBank:WP_164530211.1;Name=WP_164530211.1;gbkey=CDS;gene=gpU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000683105.1;locus_tag=L2557_RS00810;product=phage tail terminator protein;protein_id=WP_164530211.1;transl_table=11 NZ_JAIKUA010000010.1 RefSeq pseudogene 10386 10847 . + . ID=gene-L2557_RS00815;Name=L2557_RS00815;end_range=10847,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS00815;partial=true;pseudo=true NZ_JAIKUA010000010.1 Protein Homology CDS 10386 10847 . + 0 ID=cds-L2557_RS00815;Parent=gene-L2557_RS00815;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=10847,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020315046.1;locus_tag=L2557_RS00815;partial=true;product=phage tail tube protein;pseudo=true;transl_table=11 NZ_JAIKUA010000010.1 RefSeq gene 10919 11308 . + . ID=gene-L2557_RS00820;Name=gpG;gbkey=Gene;gene=gpG;gene_biotype=protein_coding;locus_tag=L2557_RS00820 NZ_JAIKUA010000010.1 Protein Homology CDS 10919 11308 . + 0 ID=cds-WP_156733909.1;Parent=gene-L2557_RS00820;Dbxref=GenBank:WP_156733909.1;Name=WP_156733909.1;gbkey=CDS;gene=gpG;inference=COORDINATES: protein motif:HMM:TIGR01674.1;locus_tag=L2557_RS00820;product=phage tail assembly chaperone G;protein_id=WP_156733909.1;transl_table=11 NZ_JAIKUA010000010.1 RefSeq gene 11374 11649 . + . ID=gene-L2557_RS00825;Name=L2557_RS00825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00825 NZ_JAIKUA010000010.1 Protein Homology CDS 11374 11649 . + 0 ID=cds-WP_235409736.1;Parent=gene-L2557_RS00825;Dbxref=GenBank:WP_235409736.1;Name=WP_235409736.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017983.6;locus_tag=L2557_RS00825;product=phage tail assembly protein T;protein_id=WP_235409736.1;transl_table=11 NZ_JAIKUA010000010.1 RefSeq gene 11618 14635 . + . ID=gene-L2557_RS00830;Name=L2557_RS00830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00830 NZ_JAIKUA010000010.1 Protein Homology CDS 11618 14635 . + 0 ID=cds-WP_156733905.1;Parent=gene-L2557_RS00830;Dbxref=GenBank:WP_156733905.1;Name=WP_156733905.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: protein motif:HMM:TIGR01541.1;locus_tag=L2557_RS00830;product=phage tail tape measure protein;protein_id=WP_156733905.1;transl_table=11 NZ_JAIKUA010000010.1 RefSeq gene 14635 14964 . + . ID=gene-L2557_RS00835;Name=L2557_RS00835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00835 NZ_JAIKUA010000010.1 Protein Homology CDS 14635 14964 . + 0 ID=cds-WP_156733903.1;Parent=gene-L2557_RS00835;Dbxref=GenBank:WP_156733903.1;Name=WP_156733903.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247883.1;locus_tag=L2557_RS00835;product=phage tail protein;protein_id=WP_156733903.1;transl_table=11 NZ_JAIKUA010000010.1 RefSeq gene 15005 15901 . + . ID=gene-L2557_RS00840;Name=L2557_RS00840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00840 NZ_JAIKUA010000010.1 GeneMarkS-2+ CDS 15005 15901 . + 0 ID=cds-WP_156733902.1;Parent=gene-L2557_RS00840;Dbxref=GenBank:WP_156733902.1;Name=WP_156733902.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS00840;product=hypothetical protein;protein_id=WP_156733902.1;transl_table=11 NZ_JAIKUA010000010.1 RefSeq gene 15979 16554 . + . ID=gene-L2557_RS00845;Name=L2557_RS00845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00845 NZ_JAIKUA010000010.1 Protein Homology CDS 15979 16554 . + 0 ID=cds-WP_156733900.1;Parent=gene-L2557_RS00845;Dbxref=GenBank:WP_156733900.1;Name=WP_156733900.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: protein motif:HMM:NF024645.6;locus_tag=L2557_RS00845;product=zinc ribbon domain-containing protein;protein_id=WP_156733900.1;transl_table=11 NZ_JAIKUA010000010.1 RefSeq gene 16608 17312 . + . ID=gene-L2557_RS00850;Name=L2557_RS00850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00850 NZ_JAIKUA010000010.1 Protein Homology CDS 16608 17312 . + 0 ID=cds-WP_156733898.1;Parent=gene-L2557_RS00850;Dbxref=GenBank:WP_156733898.1;Name=WP_156733898.1;Ontology_term=GO:0046718,GO:0051536,GO:0030430;gbkey=CDS;go_component=host cell cytoplasm|0030430||IEA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=symbiont entry into host cell|0046718||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247885.1;locus_tag=L2557_RS00850;product=phage minor tail protein L;protein_id=WP_156733898.1;transl_table=11 NZ_JAIKUA010000010.1 RefSeq gene 17334 18062 . + . ID=gene-L2557_RS00855;Name=L2557_RS00855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00855 NZ_JAIKUA010000010.1 Protein Homology CDS 17334 18062 . + 0 ID=cds-WP_235409737.1;Parent=gene-L2557_RS00855;Dbxref=GenBank:WP_235409737.1;Name=WP_235409737.1;Ontology_term=GO:0006508,GO:0008234,GO:0008235,GO:0008270;gbkey=CDS;go_function=cysteine-type peptidase activity|0008234||IEA,metalloexopeptidase activity|0008235||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247886.1;locus_tag=L2557_RS00855;product=C40 family peptidase;protein_id=WP_235409737.1;transl_table=11 NZ_JAIKUA010000010.1 RefSeq gene 17966 18616 . + . ID=gene-L2557_RS00860;Name=L2557_RS00860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00860 NZ_JAIKUA010000010.1 Protein Homology CDS 17966 18616 . + 0 ID=cds-WP_202981853.1;Parent=gene-L2557_RS00860;Dbxref=GenBank:WP_202981853.1;Name=WP_202981853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015461976.1;locus_tag=L2557_RS00860;product=tail assembly protein;protein_id=WP_202981853.1;transl_table=11 NZ_JAIKUA010000010.1 RefSeq gene 18631 22383 . + . ID=gene-L2557_RS00865;Name=gpJ;gbkey=Gene;gene=gpJ;gene_biotype=protein_coding;locus_tag=L2557_RS00865 NZ_JAIKUA010000010.1 Protein Homology CDS 18631 22383 . + 0 ID=cds-WP_156733895.1;Parent=gene-L2557_RS00865;Dbxref=GenBank:WP_156733895.1;Name=WP_156733895.1;gbkey=CDS;gene=gpJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247888.1;locus_tag=L2557_RS00865;product=TipJ family phage tail tip protein;protein_id=WP_156733895.1;transl_table=11 NZ_JAIKUA010000010.1 RefSeq gene 22388 23983 . + . ID=gene-L2557_RS00870;Name=L2557_RS00870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00870 NZ_JAIKUA010000010.1 Protein Homology CDS 22388 23983 . + 0 ID=cds-WP_235409738.1;Parent=gene-L2557_RS00870;Dbxref=GenBank:WP_235409738.1;Name=WP_235409738.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001272652.1;locus_tag=L2557_RS00870;product=phage tail fiber protein;protein_id=WP_235409738.1;transl_table=11 ##sequence-region NZ_JAIKUA010000100.1 1 545 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000100.1 RefSeq region 1 545 . + . ID=NZ_JAIKUA010000100.1:1..545;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000100.1 RefSeq gene 1 545 . - . ID=gene-L2557_RS07425;Name=L2557_RS07425;end_range=545,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07425;partial=true;start_range=.,1 NZ_JAIKUA010000100.1 GeneMarkS-2+ CDS 1 545 . - 2 ID=cds-WP_235409967.1;Parent=gene-L2557_RS07425;Dbxref=GenBank:WP_235409967.1;Name=WP_235409967.1;end_range=545,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS07425;partial=true;product=hypothetical protein;protein_id=WP_235409967.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000101.1 1 13161 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000101.1 RefSeq region 1 13161 . + . ID=NZ_JAIKUA010000101.1:1..13161;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000101.1 RefSeq gene 227 1351 . + . ID=gene-L2557_RS07430;Name=hybO;gbkey=Gene;gene=hybO;gene_biotype=protein_coding;locus_tag=L2557_RS07430 NZ_JAIKUA010000101.1 Protein Homology CDS 227 1351 . + 0 ID=cds-WP_075674248.1;Parent=gene-L2557_RS07430;Dbxref=GenBank:WP_075674248.1;Name=WP_075674248.1;gbkey=CDS;gene=hybO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245185.1;locus_tag=L2557_RS07430;product=hydrogenase 2 small subunit;protein_id=WP_075674248.1;transl_table=11 NZ_JAIKUA010000101.1 RefSeq gene 1348 2361 . + . ID=gene-L2557_RS07435;Name=hybA;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=L2557_RS07435 NZ_JAIKUA010000101.1 Protein Homology CDS 1348 2361 . + 0 ID=cds-WP_036911746.1;Parent=gene-L2557_RS07435;Dbxref=GenBank:WP_036911746.1;Name=WP_036911746.1;gbkey=CDS;gene=hybA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462064.1;locus_tag=L2557_RS07435;product=hydrogenase 2 operon protein HybA;protein_id=WP_036911746.1;transl_table=11 NZ_JAIKUA010000101.1 RefSeq gene 2348 3529 . + . ID=gene-L2557_RS07440;Name=hybB;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=L2557_RS07440 NZ_JAIKUA010000101.1 Protein Homology CDS 2348 3529 . + 0 ID=cds-WP_075674247.1;Parent=gene-L2557_RS07440;Dbxref=GenBank:WP_075674247.1;Name=WP_075674247.1;gbkey=CDS;gene=hybB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245183.1;locus_tag=L2557_RS07440;product=Ni/Fe-hydrogenase cytochrome b subunit;protein_id=WP_075674247.1;transl_table=11 NZ_JAIKUA010000101.1 RefSeq gene 3526 5229 . + . ID=gene-L2557_RS07445;Name=hybC;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=L2557_RS07445 NZ_JAIKUA010000101.1 Protein Homology CDS 3526 5229 . + 0 ID=cds-WP_064718974.1;Parent=gene-L2557_RS07445;Dbxref=GenBank:WP_064718974.1;Name=WP_064718974.1;Ontology_term=GO:0008901;gbkey=CDS;gene=hybC;go_function=ferredoxin hydrogenase activity|0008901||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005345185.1;locus_tag=L2557_RS07445;product=hydrogenase 2 large subunit;protein_id=WP_064718974.1;transl_table=11 NZ_JAIKUA010000101.1 RefSeq gene 5229 5717 . + . ID=gene-L2557_RS07450;Name=L2557_RS07450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07450 NZ_JAIKUA010000101.1 Protein Homology CDS 5229 5717 . + 0 ID=cds-WP_006535184.1;Parent=gene-L2557_RS07450;Dbxref=GenBank:WP_006535184.1;Name=WP_006535184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245181.1;locus_tag=L2557_RS07450;product=HyaD/HybD family hydrogenase maturation endopeptidase;protein_id=WP_006535184.1;transl_table=11 NZ_JAIKUA010000101.1 RefSeq gene 5714 6208 . + . ID=gene-L2557_RS07455;Name=hybE;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=L2557_RS07455 NZ_JAIKUA010000101.1 Protein Homology CDS 5714 6208 . + 0 ID=cds-WP_075674245.1;Parent=gene-L2557_RS07455;Dbxref=GenBank:WP_075674245.1;Name=WP_075674245.1;gbkey=CDS;gene=hybE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245180.1;locus_tag=L2557_RS07455;product=hydrogenase-2 assembly chaperone;protein_id=WP_075674245.1;transl_table=11 NZ_JAIKUA010000101.1 RefSeq gene 6271 7494 . + . ID=gene-L2557_RS07460;Name=hypB;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=L2557_RS07460 NZ_JAIKUA010000101.1 Protein Homology CDS 6271 7494 . + 0 ID=cds-WP_075674244.1;Parent=gene-L2557_RS07460;Dbxref=GenBank:WP_075674244.1;Name=WP_075674244.1;Ontology_term=GO:0051604,GO:0003924,GO:0016151;gbkey=CDS;gene=hypB;go_function=GTPase activity|0003924||IEA,nickel cation binding|0016151||IEA;go_process=protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628251.1;locus_tag=L2557_RS07460;product=hydrogenase nickel incorporation protein HypB;protein_id=WP_075674244.1;transl_table=11 NZ_JAIKUA010000101.1 RefSeq gene 7485 7751 . + . ID=gene-L2557_RS07465;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=L2557_RS07465 NZ_JAIKUA010000101.1 Protein Homology CDS 7485 7751 . + 0 ID=cds-WP_006535180.1;Parent=gene-L2557_RS07465;Dbxref=GenBank:WP_006535180.1;Name=WP_006535180.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245178.1;locus_tag=L2557_RS07465;product=hydrogenase maturation factor HybG;protein_id=WP_006535180.1;transl_table=11 NZ_JAIKUA010000101.1 RefSeq gene 7738 8874 . + . ID=gene-L2557_RS07470;Name=hypD;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=L2557_RS07470 NZ_JAIKUA010000101.1 Protein Homology CDS 7738 8874 . + 0 ID=cds-WP_075674243.1;Parent=gene-L2557_RS07470;Dbxref=GenBank:WP_075674243.1;Name=WP_075674243.1;Ontology_term=GO:0036211,GO:0016530;gbkey=CDS;gene=hypD;go_function=metallochaperone activity|0016530||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248992.1;locus_tag=L2557_RS07470;product=hydrogenase formation protein HypD;protein_id=WP_075674243.1;transl_table=11 NZ_JAIKUA010000101.1 RefSeq gene 8871 9890 . + . ID=gene-L2557_RS07475;Name=hypE;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=L2557_RS07475 NZ_JAIKUA010000101.1 Protein Homology CDS 8871 9890 . + 0 ID=cds-WP_191901784.1;Parent=gene-L2557_RS07475;Dbxref=GenBank:WP_191901784.1;Name=WP_191901784.1;gbkey=CDS;gene=hypE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252610.1;locus_tag=L2557_RS07475;product=hydrogenase expression/formation protein HypE;protein_id=WP_191901784.1;transl_table=11 NZ_JAIKUA010000101.1 RefSeq gene 10099 11325 . + . ID=gene-L2557_RS07480;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=L2557_RS07480 NZ_JAIKUA010000101.1 Protein Homology CDS 10099 11325 . + 0 ID=cds-WP_075674241.1;Parent=gene-L2557_RS07480;Dbxref=GenBank:WP_075674241.1;Name=WP_075674241.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245174.1;locus_tag=L2557_RS07480;product=selenium metabolism membrane protein YedE/FdhT;protein_id=WP_075674241.1;transl_table=11 NZ_JAIKUA010000101.1 RefSeq gene 11322 11564 . + . ID=gene-L2557_RS07485;Name=yedF;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=L2557_RS07485 NZ_JAIKUA010000101.1 Protein Homology CDS 11322 11564 . + 0 ID=cds-WP_006535172.1;Parent=gene-L2557_RS07485;Dbxref=GenBank:WP_006535172.1;Name=WP_006535172.1;gbkey=CDS;gene=yedF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926886.1;locus_tag=L2557_RS07485;product=sulfurtransferase-like selenium metabolism protein YedF;protein_id=WP_006535172.1;transl_table=11 NZ_JAIKUA010000101.1 RefSeq gene 11633 12541 . - . ID=gene-L2557_RS07490;Name=rdgC;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=L2557_RS07490 NZ_JAIKUA010000101.1 Protein Homology CDS 11633 12541 . - 0 ID=cds-WP_099659982.1;Parent=gene-L2557_RS07490;Dbxref=GenBank:WP_099659982.1;Name=WP_099659982.1;Ontology_term=GO:0006310;gbkey=CDS;gene=rdgC;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245172.1;locus_tag=L2557_RS07490;product=recombination-associated protein RdgC;protein_id=WP_099659982.1;transl_table=11 ##sequence-region NZ_JAIKUA010000102.1 1 10550 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000102.1 RefSeq region 1 10550 . + . ID=NZ_JAIKUA010000102.1:1..10550;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000102.1 RefSeq gene 276 446 . - . ID=gene-L2557_RS07495;Name=rmf;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=L2557_RS07495 NZ_JAIKUA010000102.1 Protein Homology CDS 276 446 . - 0 ID=cds-WP_023581348.1;Parent=gene-L2557_RS07495;Dbxref=GenBank:WP_023581348.1;Name=WP_023581348.1;Ontology_term=GO:0141014,GO:0043022;gbkey=CDS;gene=rmf;go_function=ribosome binding|0043022||IEA;go_process=ribosome hibernation|0141014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244679.1;locus_tag=L2557_RS07495;product=ribosome modulation factor;protein_id=WP_023581348.1;transl_table=11 NZ_JAIKUA010000102.1 RefSeq gene 921 1334 . - . ID=gene-L2557_RS07500;Name=L2557_RS07500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07500 NZ_JAIKUA010000102.1 Protein Homology CDS 921 1334 . - 0 ID=cds-WP_075673137.1;Parent=gene-L2557_RS07500;Dbxref=GenBank:WP_075673137.1;Name=WP_075673137.1;Ontology_term=GO:0003723;gbkey=CDS;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537370.1;locus_tag=L2557_RS07500;product=ASCH domain-containing protein;protein_id=WP_075673137.1;transl_table=11 NZ_JAIKUA010000102.1 RefSeq gene 1447 2019 . - . ID=gene-L2557_RS07505;Name=pqiC;gbkey=Gene;gene=pqiC;gene_biotype=protein_coding;locus_tag=L2557_RS07505 NZ_JAIKUA010000102.1 Protein Homology CDS 1447 2019 . - 0 ID=cds-WP_075673160.1;Parent=gene-L2557_RS07505;Dbxref=GenBank:WP_075673160.1;Name=WP_075673160.1;gbkey=CDS;gene=pqiC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251932.1;locus_tag=L2557_RS07505;product=membrane integrity-associated transporter subunit PqiC;protein_id=WP_075673160.1;transl_table=11 NZ_JAIKUA010000102.1 RefSeq gene 2019 3671 . - . ID=gene-L2557_RS07510;Name=pqiB;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=L2557_RS07510 NZ_JAIKUA010000102.1 Protein Homology CDS 2019 3671 . - 0 ID=cds-WP_235409968.1;Parent=gene-L2557_RS07510;Dbxref=GenBank:WP_235409968.1;Name=WP_235409968.1;gbkey=CDS;gene=pqiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537372.1;locus_tag=L2557_RS07510;product=intermembrane transport protein PqiB;protein_id=WP_235409968.1;transl_table=11 NZ_JAIKUA010000102.1 RefSeq gene 3664 4953 . - . ID=gene-L2557_RS07515;Name=pqiA;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=L2557_RS07515 NZ_JAIKUA010000102.1 Protein Homology CDS 3664 4953 . - 0 ID=cds-WP_099659757.1;Parent=gene-L2557_RS07515;Dbxref=GenBank:WP_099659757.1;Name=WP_099659757.1;gbkey=CDS;gene=pqiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247682.1;locus_tag=L2557_RS07515;product=membrane integrity-associated transporter subunit PqiA;protein_id=WP_099659757.1;transl_table=11 NZ_JAIKUA010000102.1 RefSeq gene 5039 6967 . - . ID=gene-L2557_RS07520;Name=L2557_RS07520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07520 NZ_JAIKUA010000102.1 Protein Homology CDS 5039 6967 . - 0 ID=cds-WP_075673134.1;Parent=gene-L2557_RS07520;Dbxref=GenBank:WP_075673134.1;Name=WP_075673134.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244674.1;locus_tag=L2557_RS07520;product=ABC transporter ATP-binding protein;protein_id=WP_075673134.1;transl_table=11 NZ_JAIKUA010000102.1 RefSeq gene 6974 9088 . - . ID=gene-L2557_RS07525;Name=rlmKL;gbkey=Gene;gene=rlmKL;gene_biotype=protein_coding;locus_tag=L2557_RS07525 NZ_JAIKUA010000102.1 Protein Homology CDS 6974 9088 . - 0 ID=cds-WP_075673133.1;Parent=gene-L2557_RS07525;Dbxref=GenBank:WP_075673133.1;Name=WP_075673133.1;Ontology_term=GO:0031167,GO:0003723,GO:0008990;gbkey=CDS;gene=rlmKL;go_function=RNA binding|0003723||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247681.1;locus_tag=L2557_RS07525;product=bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL;protein_id=WP_075673133.1;transl_table=11 NZ_JAIKUA010000102.1 RefSeq gene 9196 10320 . + . ID=gene-L2557_RS07530;Name=L2557_RS07530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07530 NZ_JAIKUA010000102.1 Protein Homology CDS 9196 10320 . + 0 ID=cds-WP_235409969.1;Parent=gene-L2557_RS07530;Dbxref=GenBank:WP_235409969.1;Name=WP_235409969.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244672.1;locus_tag=L2557_RS07530;product=YcbX family protein;protein_id=WP_235409969.1;transl_table=11 ##sequence-region NZ_JAIKUA010000103.1 1 35353 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000103.1 RefSeq region 1 35353 . + . ID=NZ_JAIKUA010000103.1:1..35353;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000103.1 RefSeq gene 350 664 . - . ID=gene-L2557_RS07535;Name=L2557_RS07535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07535 NZ_JAIKUA010000103.1 Protein Homology CDS 350 664 . - 0 ID=cds-WP_006536978.1;Parent=gene-L2557_RS07535;Dbxref=GenBank:WP_006536978.1;Name=WP_006536978.1;Ontology_term=GO:0008289;gbkey=CDS;go_function=lipid binding|0008289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243069.1;locus_tag=L2557_RS07535;product=BON domain-containing protein;protein_id=WP_006536978.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 940 1746 . - . ID=gene-L2557_RS07540;Name=trpA;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=L2557_RS07540 NZ_JAIKUA010000103.1 Protein Homology CDS 940 1746 . - 0 ID=cds-WP_075672116.1;Parent=gene-L2557_RS07540;Dbxref=GenBank:WP_075672116.1;Name=WP_075672116.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpA;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536977.1;locus_tag=L2557_RS07540;product=tryptophan synthase subunit alpha;protein_id=WP_075672116.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 1746 2936 . - . ID=gene-L2557_RS07545;Name=trpB;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=L2557_RS07545 NZ_JAIKUA010000103.1 Protein Homology CDS 1746 2936 . - 0 ID=cds-WP_036937130.1;Parent=gene-L2557_RS07545;Dbxref=GenBank:WP_036937130.1;Name=WP_036937130.1;Ontology_term=GO:0000162,GO:0004834;gbkey=CDS;gene=trpB;go_function=tryptophan synthase activity|0004834||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011146690.1;locus_tag=L2557_RS07545;product=tryptophan synthase subunit beta;protein_id=WP_036937130.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 2976 4331 . - . ID=gene-L2557_RS07550;Name=trpCF;gbkey=Gene;gene=trpCF;gene_biotype=protein_coding;locus_tag=L2557_RS07550 NZ_JAIKUA010000103.1 Protein Homology CDS 2976 4331 . - 0 ID=cds-WP_075672114.1;Parent=gene-L2557_RS07550;Dbxref=GenBank:WP_075672114.1;Name=WP_075672114.1;Ontology_term=GO:0006568,GO:0004425,GO:0004640;gbkey=CDS;gene=trpCF;go_function=indole-3-glycerol-phosphate synthase activity|0004425||IEA,phosphoribosylanthranilate isomerase activity|0004640||IEA;go_process=L-tryptophan metabolic process|0006568||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251067.1;locus_tag=L2557_RS07550;product=bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF;protein_id=WP_075672114.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 4336 5334 . - . ID=gene-L2557_RS07555;Name=trpD;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=L2557_RS07555 NZ_JAIKUA010000103.1 Protein Homology CDS 4336 5334 . - 0 ID=cds-WP_075672112.1;Parent=gene-L2557_RS07555;Dbxref=GenBank:WP_075672112.1;Name=WP_075672112.1;Ontology_term=GO:0000162,GO:0004048;gbkey=CDS;gene=trpD;go_function=anthranilate phosphoribosyltransferase activity|0004048||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243063.1;locus_tag=L2557_RS07555;product=anthranilate phosphoribosyltransferase;protein_id=WP_075672112.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 5336 5929 . - . ID=gene-L2557_RS07560;Name=L2557_RS07560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07560 NZ_JAIKUA010000103.1 Protein Homology CDS 5336 5929 . - 0 ID=cds-WP_075672110.1;Parent=gene-L2557_RS07560;Dbxref=GenBank:WP_075672110.1;Name=WP_075672110.1;Ontology_term=GO:0000162,GO:0004049,GO:0046820;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA,4-amino-4-deoxychorismate synthase activity|0046820||IEA;go_process=L-tryptophan biosynthetic process|0000162||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536973.1;locus_tag=L2557_RS07560;product=aminodeoxychorismate/anthranilate synthase component II;protein_id=WP_075672110.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 5929 7506 . - . ID=gene-L2557_RS07565;Name=L2557_RS07565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07565 NZ_JAIKUA010000103.1 Protein Homology CDS 5929 7506 . - 0 ID=cds-WP_235409970.1;Parent=gene-L2557_RS07565;Dbxref=GenBank:WP_235409970.1;Name=WP_235409970.1;Ontology_term=GO:0009058,GO:0004049;gbkey=CDS;go_function=anthranilate synthase activity|0004049||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367968.1;locus_tag=L2557_RS07565;product=anthranilate synthase component 1;protein_id=WP_235409970.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 7813 8673 . + . ID=gene-L2557_RS07570;Name=rnm;gbkey=Gene;gene=rnm;gene_biotype=protein_coding;gene_synonym=trpH,yciV;locus_tag=L2557_RS07570 NZ_JAIKUA010000103.1 Protein Homology CDS 7813 8673 . + 0 ID=cds-WP_099659692.1;Parent=gene-L2557_RS07570;Dbxref=GenBank:WP_099659692.1;Name=WP_099659692.1;Ontology_term=GO:0006364,GO:0004534,GO:0035312,GO:0097657;gbkey=CDS;gene=rnm;go_function=5'-3' RNA exonuclease activity|0004534||IEA,5'-3' DNA exonuclease activity|0035312||IEA,3'%2C5'-nucleotide bisphosphate phosphatase activity|0097657||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017593.1;locus_tag=L2557_RS07570;product=RNase RNM;protein_id=WP_099659692.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 8698 9318 . + . ID=gene-L2557_RS07575;Name=L2557_RS07575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07575 NZ_JAIKUA010000103.1 Protein Homology CDS 8698 9318 . + 0 ID=cds-WP_023582284.1;Parent=gene-L2557_RS07575;Dbxref=GenBank:WP_023582284.1;Name=WP_023582284.1;Ontology_term=GO:0006400,GO:0003725,GO:0061710;gbkey=CDS;go_function=double-stranded RNA binding|0003725||IEA,L-threonylcarbamoyladenylate synthase|0061710||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004390873.1;locus_tag=L2557_RS07575;product=L-threonylcarbamoyladenylate synthase;protein_id=WP_023582284.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 9742 10665 . + . ID=gene-L2557_RS07580;Name=rluB;gbkey=Gene;gene=rluB;gene_biotype=protein_coding;locus_tag=L2557_RS07580 NZ_JAIKUA010000103.1 Protein Homology CDS 9742 10665 . + 0 ID=cds-WP_075672104.1;Parent=gene-L2557_RS07580;Dbxref=GenBank:WP_075672104.1;Name=WP_075672104.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243055.1;locus_tag=L2557_RS07580;product=23S rRNA pseudouridine(2605) synthase RluB;protein_id=WP_075672104.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 10866 11813 . + . ID=gene-L2557_RS07585;Name=L2557_RS07585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07585 NZ_JAIKUA010000103.1 Protein Homology CDS 10866 11813 . + 0 ID=cds-WP_075672102.1;Parent=gene-L2557_RS07585;Dbxref=GenBank:WP_075672102.1;Name=WP_075672102.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367967.1;locus_tag=L2557_RS07585;product=hypothetical protein;protein_id=WP_075672102.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 11858 12448 . - . ID=gene-L2557_RS07590;Name=cobO;gbkey=Gene;gene=cobO;gene_biotype=protein_coding;locus_tag=L2557_RS07590 NZ_JAIKUA010000103.1 Protein Homology CDS 11858 12448 . - 0 ID=cds-WP_075672100.1;Parent=gene-L2557_RS07590;Dbxref=GenBank:WP_075672100.1;Name=WP_075672100.1;Ontology_term=GO:0009236,GO:0008817;gbkey=CDS;gene=cobO;go_function=corrinoid adenosyltransferase activity|0008817||IEA;go_process=cobalamin biosynthetic process|0009236||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243052.1;locus_tag=L2557_RS07590;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=WP_075672100.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 12474 13235 . - . ID=gene-L2557_RS07595;Name=L2557_RS07595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07595 NZ_JAIKUA010000103.1 Protein Homology CDS 12474 13235 . - 0 ID=cds-WP_171455364.1;Parent=gene-L2557_RS07595;Dbxref=GenBank:WP_171455364.1;Name=WP_171455364.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005164229.1;locus_tag=L2557_RS07595;product=YciK family oxidoreductase;protein_id=WP_171455364.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 13449 14495 . + . ID=gene-L2557_RS07600;Name=sohB;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=L2557_RS07600 NZ_JAIKUA010000103.1 Protein Homology CDS 13449 14495 . + 0 ID=cds-WP_075672096.1;Parent=gene-L2557_RS07600;Dbxref=GenBank:WP_075672096.1;Name=WP_075672096.1;Ontology_term=GO:0006508,GO:0008233;gbkey=CDS;gene=sohB;go_function=peptidase activity|0008233||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004699213.1;locus_tag=L2557_RS07600;product=protease SohB;protein_id=WP_075672096.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 14970 15218 . - . ID=gene-L2557_RS07605;Name=L2557_RS07605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07605 NZ_JAIKUA010000103.1 Protein Homology CDS 14970 15218 . - 0 ID=cds-WP_088495697.1;Parent=gene-L2557_RS07605;Dbxref=GenBank:WP_088495697.1;Name=WP_088495697.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536960.1;locus_tag=L2557_RS07605;product=YciN family protein;protein_id=WP_088495697.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 15526 18123 . + . ID=gene-L2557_RS07610;Name=topA;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=L2557_RS07610 NZ_JAIKUA010000103.1 Protein Homology CDS 15526 18123 . + 0 ID=cds-WP_075672092.1;Parent=gene-L2557_RS07610;Dbxref=GenBank:WP_075672092.1;Name=WP_075672092.1;Ontology_term=GO:0006260,GO:0006265,GO:0003677,GO:0003917,GO:0005737;gbkey=CDS;gene=topA;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA;go_process=DNA replication|0006260||IEA,DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191581.1;locus_tag=L2557_RS07610;product=type I DNA topoisomerase;protein_id=WP_075672092.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 18279 18803 . + . ID=gene-L2557_RS07615;Name=sodC;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=L2557_RS07615 NZ_JAIKUA010000103.1 Protein Homology CDS 18279 18803 . + 0 ID=cds-WP_099659693.1;Parent=gene-L2557_RS07615;Dbxref=GenBank:WP_099659693.1;Name=WP_099659693.1;Ontology_term=GO:0004784;gbkey=CDS;gene=sodC;go_function=superoxide dismutase activity|0004784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243045.1;locus_tag=L2557_RS07615;product=superoxide dismutase family protein;protein_id=WP_099659693.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 19041 20015 . + . ID=gene-L2557_RS07620;Name=cysB;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=L2557_RS07620 NZ_JAIKUA010000103.1 Protein Homology CDS 19041 20015 . + 0 ID=cds-WP_235409971.1;Parent=gene-L2557_RS07620;Dbxref=GenBank:WP_235409971.1;Name=WP_235409971.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=cysB;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536954.1;locus_tag=L2557_RS07620;product=HTH-type transcriptional regulator CysB;protein_id=WP_235409971.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 20077 20907 . - . ID=gene-L2557_RS07625;Name=L2557_RS07625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07625 NZ_JAIKUA010000103.1 Protein Homology CDS 20077 20907 . - 0 ID=cds-WP_235409972.1;Parent=gene-L2557_RS07625;Dbxref=GenBank:WP_235409972.1;Name=WP_235409972.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248113.1;locus_tag=L2557_RS07625;product=hypothetical protein;protein_id=WP_235409972.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 21127 23799 . + . ID=gene-L2557_RS07630;Name=acnA;gbkey=Gene;gene=acnA;gene_biotype=protein_coding;locus_tag=L2557_RS07630 NZ_JAIKUA010000103.1 Protein Homology CDS 21127 23799 . + 0 ID=cds-WP_235409973.1;Parent=gene-L2557_RS07630;Dbxref=GenBank:WP_235409973.1;Name=WP_235409973.1;Ontology_term=GO:0006099,GO:0003994;gbkey=CDS;gene=acnA;go_function=aconitate hydratase activity|0003994||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005169930.1;locus_tag=L2557_RS07630;product=aconitate hydratase AcnA;protein_id=WP_235409973.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 23929 24744 . - . ID=gene-L2557_RS07635;Name=L2557_RS07635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07635 NZ_JAIKUA010000103.1 Protein Homology CDS 23929 24744 . - 0 ID=cds-WP_109420116.1;Parent=gene-L2557_RS07635;Dbxref=GenBank:WP_109420116.1;Name=WP_109420116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243034.1;locus_tag=L2557_RS07635;product=MetQ/NlpA family lipoprotein;protein_id=WP_109420116.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 24995 25594 . - . ID=gene-L2557_RS07640;Name=ribA;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=L2557_RS07640 NZ_JAIKUA010000103.1 Protein Homology CDS 24995 25594 . - 0 ID=cds-WP_075672080.1;Parent=gene-L2557_RS07640;Dbxref=GenBank:WP_075672080.1;Name=WP_075672080.1;Ontology_term=GO:0003935;gbkey=CDS;gene=ribA;go_function=GTP cyclohydrolase II activity|0003935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243033.1;locus_tag=L2557_RS07640;product=GTP cyclohydrolase II;protein_id=WP_075672080.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 25861 26580 . + . ID=gene-L2557_RS07645;Name=pgpB;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=L2557_RS07645 NZ_JAIKUA010000103.1 Protein Homology CDS 25861 26580 . + 0 ID=cds-WP_099659697.1;Parent=gene-L2557_RS07645;Dbxref=GenBank:WP_099659697.1;Name=WP_099659697.1;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=pgpB;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367957.1;locus_tag=L2557_RS07645;product=phosphatidylglycerophosphatase B;protein_id=WP_099659697.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 26800 27057 . + . ID=gene-L2557_RS07650;Name=L2557_RS07650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07650 NZ_JAIKUA010000103.1 Protein Homology CDS 26800 27057 . + 0 ID=cds-WP_229578439.1;Parent=gene-L2557_RS07650;Dbxref=GenBank:WP_229578439.1;Name=WP_229578439.1;Ontology_term=GO:0008653,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536944.1;locus_tag=L2557_RS07650;product=LapA family protein;protein_id=WP_229578439.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 27070 28239 . + . ID=gene-L2557_RS07655;Name=lapB;gbkey=Gene;gene=lapB;gene_biotype=protein_coding;locus_tag=L2557_RS07655 NZ_JAIKUA010000103.1 Protein Homology CDS 27070 28239 . + 0 ID=cds-WP_075672074.1;Parent=gene-L2557_RS07655;Dbxref=GenBank:WP_075672074.1;Name=WP_075672074.1;Ontology_term=GO:0008653,GO:0005515;gbkey=CDS;gene=lapB;go_function=protein binding|0005515||IEA;go_process=lipopolysaccharide metabolic process|0008653||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210615.1;locus_tag=L2557_RS07655;product=lipopolysaccharide assembly protein LapB;protein_id=WP_075672074.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 28285 29019 . + . ID=gene-L2557_RS07660;Name=pyrF;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=L2557_RS07660 NZ_JAIKUA010000103.1 Protein Homology CDS 28285 29019 . + 0 ID=cds-WP_235409974.1;Parent=gene-L2557_RS07660;Dbxref=GenBank:WP_235409974.1;Name=WP_235409974.1;Ontology_term=GO:0006207,GO:0044205,GO:0004590;gbkey=CDS;gene=pyrF;go_function=orotidine-5'-phosphate decarboxylase activity|0004590||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,'de novo' UMP biosynthetic process|0044205||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536942.1;locus_tag=L2557_RS07660;product=orotidine-5'-phosphate decarboxylase;protein_id=WP_235409974.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 29026 29346 . + . ID=gene-L2557_RS07665;Name=yciH;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=L2557_RS07665 NZ_JAIKUA010000103.1 Protein Homology CDS 29026 29346 . + 0 ID=cds-WP_223673655.1;Parent=gene-L2557_RS07665;Dbxref=GenBank:WP_223673655.1;Name=WP_223673655.1;gbkey=CDS;gene=yciH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243028.1;locus_tag=L2557_RS07665;product=stress response translation initiation inhibitor YciH;protein_id=WP_223673655.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 29399 29947 . - . ID=gene-L2557_RS07670;Name=L2557_RS07670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07670 NZ_JAIKUA010000103.1 Protein Homology CDS 29399 29947 . - 0 ID=cds-WP_159242185.1;Parent=gene-L2557_RS07670;Dbxref=GenBank:WP_159242185.1;Name=WP_159242185.1;Ontology_term=GO:0003950;gbkey=CDS;go_function=NAD+ poly-ADP-ribosyltransferase activity|0003950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536940.1;locus_tag=L2557_RS07670;product=RNA 2'-phosphotransferase;protein_id=WP_159242185.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 30127 32073 . - . ID=gene-L2557_RS07675;Name=L2557_RS07675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07675 NZ_JAIKUA010000103.1 Protein Homology CDS 30127 32073 . - 0 ID=cds-WP_075672066.1;Parent=gene-L2557_RS07675;Dbxref=GenBank:WP_075672066.1;Name=WP_075672066.1;Ontology_term=GO:0006401,GO:0003723,GO:0008859;gbkey=CDS;go_function=RNA binding|0003723||IEA,exoribonuclease II activity|0008859||IEA;go_process=RNA catabolic process|0006401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628098.1;locus_tag=L2557_RS07675;product=exoribonuclease II;protein_id=WP_075672066.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 32187 32825 . - . ID=gene-L2557_RS07680;Name=nth;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=L2557_RS07680 NZ_JAIKUA010000103.1 Protein Homology CDS 32187 32825 . - 0 ID=cds-WP_075672064.1;Parent=gene-L2557_RS07680;Dbxref=GenBank:WP_075672064.1;Name=WP_075672064.1;Ontology_term=GO:0006284,GO:0003906;gbkey=CDS;gene=nth;go_function=DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243025.1;locus_tag=L2557_RS07680;product=endonuclease III;protein_id=WP_075672064.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 32838 33542 . - . ID=gene-L2557_RS07685;Name=L2557_RS07685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07685 NZ_JAIKUA010000103.1 Protein Homology CDS 32838 33542 . - 0 ID=cds-WP_075672061.1;Parent=gene-L2557_RS07685;Dbxref=GenBank:WP_075672061.1;Name=WP_075672061.1;Ontology_term=GO:0022900;gbkey=CDS;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243024.1;locus_tag=L2557_RS07685;product=electron transport complex subunit E;protein_id=WP_075672061.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 33544 34170 . - . ID=gene-L2557_RS07690;Name=rsxG;gbkey=Gene;gene=rsxG;gene_biotype=protein_coding;locus_tag=L2557_RS07690 NZ_JAIKUA010000103.1 Protein Homology CDS 33544 34170 . - 0 ID=cds-WP_098942970.1;Parent=gene-L2557_RS07690;Dbxref=GenBank:WP_098942970.1;Name=WP_098942970.1;Ontology_term=GO:0022900,GO:0009055,GO:0010181,GO:0016020;gbkey=CDS;gene=rsxG;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251120.1;locus_tag=L2557_RS07690;product=electron transport complex subunit RsxG;protein_id=WP_098942970.1;transl_table=11 NZ_JAIKUA010000103.1 RefSeq gene 34187 35263 . - . ID=gene-L2557_RS07695;Name=rsxD;gbkey=Gene;gene=rsxD;gene_biotype=protein_coding;locus_tag=L2557_RS07695 NZ_JAIKUA010000103.1 Protein Homology CDS 34187 35263 . - 0 ID=cds-WP_075672057.1;Parent=gene-L2557_RS07695;Dbxref=GenBank:WP_075672057.1;Name=WP_075672057.1;Ontology_term=GO:0022900,GO:0055085,GO:0016020;gbkey=CDS;gene=rsxD;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243022.1;locus_tag=L2557_RS07695;product=electron transport complex subunit RsxD;protein_id=WP_075672057.1;transl_table=11 ##sequence-region NZ_JAIKUA010000104.1 1 8870 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000104.1 RefSeq region 1 8870 . + . ID=NZ_JAIKUA010000104.1:1..8870;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000104.1 RefSeq gene 276 1748 . + . ID=gene-L2557_RS07700;Name=L2557_RS07700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07700 NZ_JAIKUA010000104.1 Protein Homology CDS 276 1748 . + 0 ID=cds-WP_075674063.1;Parent=gene-L2557_RS07700;Dbxref=GenBank:WP_075674063.1;Name=WP_075674063.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243466.1;locus_tag=L2557_RS07700;product=alanine/glycine:cation symporter family protein;protein_id=WP_075674063.1;transl_table=11 NZ_JAIKUA010000104.1 RefSeq gene 1848 2687 . + . ID=gene-L2557_RS07705;Name=L2557_RS07705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07705 NZ_JAIKUA010000104.1 Protein Homology CDS 1848 2687 . + 0 ID=cds-WP_075674062.1;Parent=gene-L2557_RS07705;Dbxref=GenBank:WP_075674062.1;Name=WP_075674062.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827494.1;locus_tag=L2557_RS07705;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_075674062.1;transl_table=11 NZ_JAIKUA010000104.1 RefSeq gene 2798 4144 . - . ID=gene-L2557_RS07710;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=L2557_RS07710 NZ_JAIKUA010000104.1 Protein Homology CDS 2798 4144 . - 0 ID=cds-WP_099660601.1;Parent=gene-L2557_RS07710;Dbxref=GenBank:WP_099660601.1;Name=WP_099660601.1;Ontology_term=GO:0015803,GO:0015658,GO:0016020;gbkey=CDS;gene=brnQ;go_component=membrane|0016020||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243464.1;locus_tag=L2557_RS07710;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_099660601.1;transl_table=11 NZ_JAIKUA010000104.1 RefSeq gene 4447 5253 . - . ID=gene-L2557_RS07715;Name=yidA;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=L2557_RS07715 NZ_JAIKUA010000104.1 Protein Homology CDS 4447 5253 . - 0 ID=cds-WP_075674060.1;Parent=gene-L2557_RS07715;Dbxref=GenBank:WP_075674060.1;Name=WP_075674060.1;Ontology_term=GO:0016787;gbkey=CDS;gene=yidA;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248301.1;locus_tag=L2557_RS07715;product=sugar-phosphatase;protein_id=WP_075674060.1;transl_table=11 NZ_JAIKUA010000104.1 RefSeq gene 5381 5767 . - . ID=gene-L2557_RS07720;Name=L2557_RS07720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07720 NZ_JAIKUA010000104.1 Protein Homology CDS 5381 5767 . - 0 ID=cds-WP_006533085.1;Parent=gene-L2557_RS07720;Dbxref=GenBank:WP_006533085.1;Name=WP_006533085.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243460.1;locus_tag=L2557_RS07720;product=helix-turn-helix domain-containing protein;protein_id=WP_006533085.1;transl_table=11 NZ_JAIKUA010000104.1 RefSeq gene 6128 6283 . + . ID=gene-L2557_RS07725;Name=mgrB;gbkey=Gene;gene=mgrB;gene_biotype=protein_coding;locus_tag=L2557_RS07725 NZ_JAIKUA010000104.1 Protein Homology CDS 6128 6283 . + 0 ID=cds-WP_223672311.1;Parent=gene-L2557_RS07725;Dbxref=GenBank:WP_223672311.1;Name=WP_223672311.1;Ontology_term=GO:0046677;gbkey=CDS;gene=mgrB;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_223672311.1;locus_tag=L2557_RS07725;product=PhoP/PhoQ regulatory lipoprotein MgrB;protein_id=WP_223672311.1;transl_table=11 NZ_JAIKUA010000104.1 RefSeq gene 6433 7815 . + . ID=gene-L2557_RS07730;Name=L2557_RS07730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07730 NZ_JAIKUA010000104.1 Protein Homology CDS 6433 7815 . + 0 ID=cds-WP_159241984.1;Parent=gene-L2557_RS07730;Dbxref=GenBank:WP_159241984.1;Name=WP_159241984.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533083.1;locus_tag=L2557_RS07730;product=amino acid permease;protein_id=WP_159241984.1;transl_table=11 NZ_JAIKUA010000104.1 RefSeq gene 7929 8564 . - . ID=gene-L2557_RS07735;Name=pagP;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=L2557_RS07735 NZ_JAIKUA010000104.1 Protein Homology CDS 7929 8564 . - 0 ID=cds-WP_099660599.1;Parent=gene-L2557_RS07735;Dbxref=GenBank:WP_099660599.1;Name=WP_099660599.1;gbkey=CDS;gene=pagP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243456.1;locus_tag=L2557_RS07735;product=lipid IV(A) palmitoyltransferase PagP;protein_id=WP_099660599.1;transl_table=11 ##sequence-region NZ_JAIKUA010000105.1 1 17592 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000105.1 RefSeq region 1 17592 . + . ID=NZ_JAIKUA010000105.1:1..17592;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000105.1 RefSeq gene 1 217 . + . ID=gene-L2557_RS07740;Name=L2557_RS07740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07740;partial=true;start_range=.,1 NZ_JAIKUA010000105.1 GeneMarkS-2+ CDS 1 217 . + 1 ID=cds-WP_235409975.1;Parent=gene-L2557_RS07740;Dbxref=GenBank:WP_235409975.1;Name=WP_235409975.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS07740;partial=true;product=hypothetical protein;protein_id=WP_235409975.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000105.1 RefSeq gene 294 872 . - . ID=gene-L2557_RS07745;Name=L2557_RS07745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07745 NZ_JAIKUA010000105.1 Protein Homology CDS 294 872 . - 0 ID=cds-WP_075673074.1;Parent=gene-L2557_RS07745;Dbxref=GenBank:WP_075673074.1;Name=WP_075673074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250101.1;locus_tag=L2557_RS07745;product=hypothetical protein;protein_id=WP_075673074.1;transl_table=11 NZ_JAIKUA010000105.1 RefSeq gene 1006 4683 . - . ID=gene-L2557_RS07750;Name=metH;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=L2557_RS07750 NZ_JAIKUA010000105.1 Protein Homology CDS 1006 4683 . - 0 ID=cds-WP_235409976.1;Parent=gene-L2557_RS07750;Dbxref=GenBank:WP_235409976.1;Name=WP_235409976.1;Ontology_term=GO:0009086,GO:0008270,GO:0008705,GO:0031419;gbkey=CDS;gene=metH;go_function=zinc ion binding|0008270||IEA,methionine synthase activity|0008705||IEA,cobalamin binding|0031419||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245920.1;locus_tag=L2557_RS07750;product=methionine synthase;protein_id=WP_235409976.1;transl_table=11 NZ_JAIKUA010000105.1 RefSeq gene 4938 5774 . + . ID=gene-L2557_RS07755;Name=iclR;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=L2557_RS07755 NZ_JAIKUA010000105.1 Protein Homology CDS 4938 5774 . + 0 ID=cds-WP_075673076.1;Parent=gene-L2557_RS07755;Dbxref=GenBank:WP_075673076.1;Name=WP_075673076.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=iclR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245921.1;locus_tag=L2557_RS07755;product=glyoxylate bypass operon transcriptional repressor IclR;protein_id=WP_075673076.1;transl_table=11 NZ_JAIKUA010000105.1 RefSeq gene 6080 7936 . + . ID=gene-L2557_RS07760;Name=edd;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=L2557_RS07760 NZ_JAIKUA010000105.1 Protein Homology CDS 6080 7936 . + 0 ID=cds-WP_235409977.1;Parent=gene-L2557_RS07760;Dbxref=GenBank:WP_235409977.1;Name=WP_235409977.1;Ontology_term=GO:0009255,GO:0004456;gbkey=CDS;gene=edd;go_function=phosphogluconate dehydratase activity|0004456||IEA;go_process=Entner-Doudoroff pathway through 6-phosphogluconate|0009255||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245922.1;locus_tag=L2557_RS07760;product=phosphogluconate dehydratase;protein_id=WP_235409977.1;transl_table=11 NZ_JAIKUA010000105.1 RefSeq gene 8014 8655 . + . ID=gene-L2557_RS07765;Name=L2557_RS07765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07765 NZ_JAIKUA010000105.1 Protein Homology CDS 8014 8655 . + 0 ID=cds-WP_075673078.1;Parent=gene-L2557_RS07765;Dbxref=GenBank:WP_075673078.1;Name=WP_075673078.1;Ontology_term=GO:0016829,GO:0016830,GO:0016832,GO:0016833;gbkey=CDS;go_function=lyase activity|0016829||IEA,carbon-carbon lyase activity|0016830||IEA,aldehyde-lyase activity|0016832||IEA,oxo-acid-lyase activity|0016833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460841.1;locus_tag=L2557_RS07765;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_075673078.1;transl_table=11 NZ_JAIKUA010000105.1 RefSeq gene 8745 10448 . - . ID=gene-L2557_RS07770;Name=aceK;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=L2557_RS07770 NZ_JAIKUA010000105.1 Protein Homology CDS 8745 10448 . - 0 ID=cds-WP_159241852.1;Parent=gene-L2557_RS07770;Dbxref=GenBank:WP_159241852.1;Name=WP_159241852.1;Ontology_term=GO:0006006,GO:0008772,GO:0016791;gbkey=CDS;gene=aceK;go_function=[isocitrate dehydrogenase (NADP+)] kinase activity|0008772||IEA,phosphatase activity|0016791||IEA;go_process=glucose metabolic process|0006006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628488.1;locus_tag=L2557_RS07770;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=WP_159241852.1;transl_table=11 NZ_JAIKUA010000105.1 RefSeq gene 10525 11832 . - . ID=gene-L2557_RS07775;Name=aceA;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=L2557_RS07775 NZ_JAIKUA010000105.1 Protein Homology CDS 10525 11832 . - 0 ID=cds-WP_075673080.1;Parent=gene-L2557_RS07775;Dbxref=GenBank:WP_075673080.1;Name=WP_075673080.1;Ontology_term=GO:0019752,GO:0004451;gbkey=CDS;gene=aceA;go_function=isocitrate lyase activity|0004451||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930306.1;locus_tag=L2557_RS07775;product=isocitrate lyase;protein_id=WP_075673080.1;transl_table=11 NZ_JAIKUA010000105.1 RefSeq gene 11901 13493 . - . ID=gene-L2557_RS07780;Name=aceB;gbkey=Gene;gene=aceB;gene_biotype=protein_coding;locus_tag=L2557_RS07780 NZ_JAIKUA010000105.1 Protein Homology CDS 11901 13493 . - 0 ID=cds-WP_075673081.1;Parent=gene-L2557_RS07780;Dbxref=GenBank:WP_075673081.1;Name=WP_075673081.1;Ontology_term=GO:0006097,GO:0004474;gbkey=CDS;gene=aceB;go_function=malate synthase activity|0004474||IEA;go_process=glyoxylate cycle|0006097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827343.1;locus_tag=L2557_RS07780;product=malate synthase A;protein_id=WP_075673081.1;transl_table=11 NZ_JAIKUA010000105.1 RefSeq gene 13834 14763 . + . ID=gene-L2557_RS07785;Name=metA;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=L2557_RS07785 NZ_JAIKUA010000105.1 Protein Homology CDS 13834 14763 . + 0 ID=cds-WP_099660513.1;Parent=gene-L2557_RS07785;Dbxref=GenBank:WP_099660513.1;Name=WP_099660513.1;Ontology_term=GO:0019281,GO:0008899,GO:0005737;gbkey=CDS;gene=metA;go_component=cytoplasm|0005737||IEA;go_function=homoserine O-succinyltransferase activity|0008899||IEA;go_process=L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine|0019281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004721458.1;locus_tag=L2557_RS07785;product=homoserine O-acetyltransferase MetA;protein_id=WP_099660513.1;transl_table=11 NZ_JAIKUA010000105.1 RefSeq gene 14820 15923 . - . ID=gene-L2557_RS07790;Name=L2557_RS07790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07790 NZ_JAIKUA010000105.1 Protein Homology CDS 14820 15923 . - 0 ID=cds-WP_099660514.1;Parent=gene-L2557_RS07790;Dbxref=GenBank:WP_099660514.1;Name=WP_099660514.1;Ontology_term=GO:0008270,GO:0008888,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,glycerol dehydrogenase (NAD+) activity|0008888||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245929.1;locus_tag=L2557_RS07790;product=glycerol dehydrogenase;protein_id=WP_099660514.1;transl_table=11 NZ_JAIKUA010000105.1 RefSeq gene 16176 16820 . + . ID=gene-L2557_RS07795;Name=L2557_RS07795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07795 NZ_JAIKUA010000105.1 Protein Homology CDS 16176 16820 . + 0 ID=cds-WP_099660515.1;Parent=gene-L2557_RS07795;Dbxref=GenBank:WP_099660515.1;Name=WP_099660515.1;Ontology_term=GO:0008033,GO:0008616,GO:0046872,GO:0051539,GO:0052693;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910933.1;locus_tag=L2557_RS07795;product=epoxyqueuosine reductase QueH;protein_id=WP_099660515.1;transl_table=11 NZ_JAIKUA010000105.1 RefSeq gene 16955 17491 . + . ID=gene-L2557_RS07800;Name=idi;gbkey=Gene;gene=idi;gene_biotype=protein_coding;locus_tag=L2557_RS07800 NZ_JAIKUA010000105.1 Protein Homology CDS 16955 17491 . + 0 ID=cds-WP_099660516.1;Parent=gene-L2557_RS07800;Dbxref=GenBank:WP_099660516.1;Name=WP_099660516.1;Ontology_term=GO:0008299,GO:0004452;gbkey=CDS;gene=idi;go_function=isopentenyl-diphosphate delta-isomerase activity|0004452||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250095.1;locus_tag=L2557_RS07800;product=isopentenyl-diphosphate Delta-isomerase;protein_id=WP_099660516.1;transl_table=11 ##sequence-region NZ_JAIKUA010000106.1 1 12500 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000106.1 RefSeq region 1 12500 . + . ID=NZ_JAIKUA010000106.1:1..12500;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000106.1 RefSeq gene 313 1296 . + . ID=gene-L2557_RS07805;Name=rpoS;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=L2557_RS07805 NZ_JAIKUA010000106.1 Protein Homology CDS 313 1296 . + 0 ID=cds-WP_075673787.1;Parent=gene-L2557_RS07805;Dbxref=GenBank:WP_075673787.1;Name=WP_075673787.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534072.1;locus_tag=L2557_RS07805;product=RNA polymerase sigma factor RpoS;protein_id=WP_075673787.1;transl_table=11 NZ_JAIKUA010000106.1 RefSeq gene 1467 2726 . + . ID=gene-L2557_RS07810;Name=L2557_RS07810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07810 NZ_JAIKUA010000106.1 GeneMarkS-2+ CDS 1467 2726 . + 0 ID=cds-WP_159242299.1;Parent=gene-L2557_RS07810;Dbxref=GenBank:WP_159242299.1;Name=WP_159242299.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS07810;product=hypothetical protein;protein_id=WP_159242299.1;transl_table=11 NZ_JAIKUA010000106.1 RefSeq gene 2723 3877 . + . ID=gene-L2557_RS07815;Name=L2557_RS07815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07815 NZ_JAIKUA010000106.1 GeneMarkS-2+ CDS 2723 3877 . + 0 ID=cds-WP_099660062.1;Parent=gene-L2557_RS07815;Dbxref=GenBank:WP_099660062.1;Name=WP_099660062.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS07815;product=hypothetical protein;protein_id=WP_099660062.1;transl_table=11 NZ_JAIKUA010000106.1 RefSeq gene 3993 6557 . - . ID=gene-L2557_RS07820;Name=mutS;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=L2557_RS07820 NZ_JAIKUA010000106.1 Protein Homology CDS 3993 6557 . - 0 ID=cds-WP_099660063.1;Parent=gene-L2557_RS07820;Dbxref=GenBank:WP_099660063.1;Name=WP_099660063.1;Ontology_term=GO:0006298,GO:0005524,GO:0030983;gbkey=CDS;gene=mutS;go_function=ATP binding|0005524||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827510.1;locus_tag=L2557_RS07820;product=DNA mismatch repair protein MutS;protein_id=WP_099660063.1;transl_table=11 NZ_JAIKUA010000106.1 RefSeq gene 6788 7657 . + . ID=gene-L2557_RS07825;Name=L2557_RS07825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07825 NZ_JAIKUA010000106.1 Protein Homology CDS 6788 7657 . + 0 ID=cds-WP_311317647.1;Parent=gene-L2557_RS07825;Dbxref=GenBank:WP_311317647.1;Name=WP_311317647.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: protein motif:HMM:NF024750.6;locus_tag=L2557_RS07825;product=tyrosine-type recombinase/integrase;protein_id=WP_311317647.1;transl_table=11 NZ_JAIKUA010000106.1 RefSeq gene 7658 7867 . + . ID=gene-L2557_RS17950;Name=L2557_RS17950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17950 NZ_JAIKUA010000106.1 GeneMarkS-2+ CDS 7658 7867 . + 0 ID=cds-WP_257882507.1;Parent=gene-L2557_RS17950;Dbxref=GenBank:WP_257882507.1;Name=WP_257882507.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17950;product=site-specific integrase;protein_id=WP_257882507.1;transl_table=11 NZ_JAIKUA010000106.1 RefSeq gene 8341 9939 . - . ID=gene-L2557_RS07830;Name=L2557_RS07830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07830 NZ_JAIKUA010000106.1 GeneMarkS-2+ CDS 8341 9939 . - 0 ID=cds-WP_219410020.1;Parent=gene-L2557_RS07830;Dbxref=GenBank:WP_219410020.1;Name=WP_219410020.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS07830;product=hypothetical protein;protein_id=WP_219410020.1;transl_table=11 NZ_JAIKUA010000106.1 RefSeq gene 10218 10508 . + . ID=gene-L2557_RS07835;Name=L2557_RS07835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07835 NZ_JAIKUA010000106.1 GeneMarkS-2+ CDS 10218 10508 . + 0 ID=cds-WP_061063842.1;Parent=gene-L2557_RS07835;Dbxref=GenBank:WP_061063842.1;Name=WP_061063842.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS07835;product=hypothetical protein;protein_id=WP_061063842.1;transl_table=11 NZ_JAIKUA010000106.1 RefSeq gene 10512 10769 . + . ID=gene-L2557_RS07840;Name=L2557_RS07840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07840 NZ_JAIKUA010000106.1 GeneMarkS-2+ CDS 10512 10769 . + 0 ID=cds-WP_061063841.1;Parent=gene-L2557_RS07840;Dbxref=GenBank:WP_061063841.1;Name=WP_061063841.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS07840;product=hypothetical protein;protein_id=WP_061063841.1;transl_table=11 NZ_JAIKUA010000106.1 RefSeq gene 11121 11285 . + . ID=gene-L2557_RS07845;Name=L2557_RS07845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07845 NZ_JAIKUA010000106.1 Protein Homology CDS 11121 11285 . + 0 ID=cds-WP_006536548.1;Parent=gene-L2557_RS07845;Dbxref=GenBank:WP_006536548.1;Name=WP_006536548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536548.1;locus_tag=L2557_RS07845;product=hypothetical protein;protein_id=WP_006536548.1;transl_table=11 NZ_JAIKUA010000106.1 RefSeq gene 11282 11899 . - . ID=gene-L2557_RS07850;Name=L2557_RS07850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07850 NZ_JAIKUA010000106.1 Protein Homology CDS 11282 11899 . - 0 ID=cds-WP_235409978.1;Parent=gene-L2557_RS07850;Dbxref=GenBank:WP_235409978.1;Name=WP_235409978.1;Ontology_term=GO:0018117,GO:0005524,GO:0070733;gbkey=CDS;go_function=ATP binding|0005524||IEA,AMPylase activity|0070733||IEA;go_process=protein adenylylation|0018117||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658270.1;locus_tag=L2557_RS07850;product=Fic/DOC family protein;protein_id=WP_235409978.1;transl_table=11 ##sequence-region NZ_JAIKUA010000107.1 1 18260 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000107.1 RefSeq region 1 18260 . + . ID=NZ_JAIKUA010000107.1:1..18260;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000107.1 RefSeq gene 349 1155 . + . ID=gene-L2557_RS07855;Name=xthA;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=L2557_RS07855 NZ_JAIKUA010000107.1 Protein Homology CDS 349 1155 . + 0 ID=cds-WP_075674383.1;Parent=gene-L2557_RS07855;Dbxref=GenBank:WP_075674383.1;Name=WP_075674383.1;Ontology_term=GO:0006281,GO:0003677,GO:0004519,GO:0008311;gbkey=CDS;gene=xthA;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,double-stranded DNA 3'-5' DNA exonuclease activity|0008311||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003030642.1;locus_tag=L2557_RS07855;product=exodeoxyribonuclease III;protein_id=WP_075674383.1;transl_table=11 NZ_JAIKUA010000107.1 RefSeq gene 1203 3164 . - . ID=gene-L2557_RS07860;Name=L2557_RS07860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07860 NZ_JAIKUA010000107.1 Protein Homology CDS 1203 3164 . - 0 ID=cds-WP_159364056.1;Parent=gene-L2557_RS07860;Dbxref=GenBank:WP_159364056.1;Name=WP_159364056.1;Ontology_term=GO:0006261,GO:0006265,GO:0006310,GO:0051304,GO:0003677,GO:0003916,GO:0003917,GO:0098847;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type I (single strand cut%2C ATP-independent) activity|0003917||IEA,sequence-specific single stranded DNA binding|0098847||IEA;go_process=DNA-templated DNA replication|0006261||IEA,DNA topological change|0006265||IEA,DNA recombination|0006310||IEA,chromosome separation|0051304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250914.1;locus_tag=L2557_RS07860;product=DNA topoisomerase III;protein_id=WP_159364056.1;transl_table=11 NZ_JAIKUA010000107.1 RefSeq gene 3169 4212 . - . ID=gene-L2557_RS07865;Name=selD;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=L2557_RS07865 NZ_JAIKUA010000107.1 Protein Homology CDS 3169 4212 . - 0 ID=cds-WP_075673874.1;Parent=gene-L2557_RS07865;Dbxref=GenBank:WP_075673874.1;Name=WP_075673874.1;Ontology_term=GO:0016260,GO:0004756;gbkey=CDS;gene=selD;go_function=selenide%2C water dikinase activity|0004756||IEA;go_process=selenocysteine biosynthetic process|0016260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243259.1;locus_tag=L2557_RS07865;product=selenide%2C water dikinase SelD;protein_id=WP_075673874.1;transl_table=11 NZ_JAIKUA010000107.1 RefSeq gene 4229 4780 . - . ID=gene-L2557_RS07870;Name=L2557_RS07870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07870 NZ_JAIKUA010000107.1 Protein Homology CDS 4229 4780 . - 0 ID=cds-WP_075673875.1;Parent=gene-L2557_RS07870;Dbxref=GenBank:WP_075673875.1;Name=WP_075673875.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536414.1;locus_tag=L2557_RS07870;product=NAD(P)H nitroreductase;protein_id=WP_075673875.1;transl_table=11 NZ_JAIKUA010000107.1 RefSeq gene 5327 7183 . + . ID=gene-L2557_RS07875;Name=sppA;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=L2557_RS07875 NZ_JAIKUA010000107.1 Protein Homology CDS 5327 7183 . + 0 ID=cds-WP_099660531.1;Parent=gene-L2557_RS07875;Dbxref=GenBank:WP_099660531.1;Name=WP_099660531.1;Ontology_term=GO:0006465,GO:0008233;gbkey=CDS;gene=sppA;go_function=peptidase activity|0008233||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083189.1;locus_tag=L2557_RS07875;product=signal peptide peptidase SppA;protein_id=WP_099660531.1;transl_table=11 NZ_JAIKUA010000107.1 RefSeq gene 7428 8450 . + . ID=gene-L2557_RS07880;Name=ansA;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=L2557_RS07880 NZ_JAIKUA010000107.1 Protein Homology CDS 7428 8450 . + 0 ID=cds-WP_099660532.1;Parent=gene-L2557_RS07880;Dbxref=GenBank:WP_099660532.1;Name=WP_099660532.1;Ontology_term=GO:0006520,GO:0004067;gbkey=CDS;gene=ansA;go_function=asparaginase activity|0004067||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243262.1;locus_tag=L2557_RS07880;product=asparaginase;protein_id=WP_099660532.1;transl_table=11 NZ_JAIKUA010000107.1 RefSeq gene 8473 9117 . + . ID=gene-L2557_RS07885;Name=pncA;gbkey=Gene;gene=pncA;gene_biotype=protein_coding;locus_tag=L2557_RS07885 NZ_JAIKUA010000107.1 Protein Homology CDS 8473 9117 . + 0 ID=cds-WP_075673878.1;Parent=gene-L2557_RS07885;Dbxref=GenBank:WP_075673878.1;Name=WP_075673878.1;gbkey=CDS;gene=pncA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536409.1;locus_tag=L2557_RS07885;product=bifunctional nicotinamidase/pyrazinamidase;protein_id=WP_075673878.1;transl_table=11 NZ_JAIKUA010000107.1 RefSeq gene 9224 9505 . - . ID=gene-L2557_RS07890;Name=L2557_RS07890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07890 NZ_JAIKUA010000107.1 Protein Homology CDS 9224 9505 . - 0 ID=cds-WP_036912841.1;Parent=gene-L2557_RS07890;Dbxref=GenBank:WP_036912841.1;Name=WP_036912841.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248238.1;locus_tag=L2557_RS07890;product=YeaC family protein;protein_id=WP_036912841.1;transl_table=11 NZ_JAIKUA010000107.1 RefSeq gene 9587 10024 . - . ID=gene-L2557_RS07895;Name=msrB;gbkey=Gene;gene=msrB;gene_biotype=protein_coding;locus_tag=L2557_RS07895 NZ_JAIKUA010000107.1 Protein Homology CDS 9587 10024 . - 0 ID=cds-WP_075673879.1;Parent=gene-L2557_RS07895;Dbxref=GenBank:WP_075673879.1;Name=WP_075673879.1;Ontology_term=GO:0006979,GO:0030091,GO:0033743;gbkey=CDS;gene=msrB;go_function=peptide-methionine (R)-S-oxide reductase activity|0033743||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243267.1;locus_tag=L2557_RS07895;product=peptide-methionine (R)-S-oxide reductase MsrB;protein_id=WP_075673879.1;transl_table=11 NZ_JAIKUA010000107.1 RefSeq gene 10368 11363 . + . ID=gene-L2557_RS07900;Name=gapA;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=L2557_RS07900 NZ_JAIKUA010000107.1 Protein Homology CDS 10368 11363 . + 0 ID=cds-WP_023581959.1;Parent=gene-L2557_RS07900;Dbxref=GenBank:WP_023581959.1;Name=WP_023581959.1;gbkey=CDS;gene=gapA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310515.1;locus_tag=L2557_RS07900;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=WP_023581959.1;transl_table=11 NZ_JAIKUA010000107.1 RefSeq gene 11479 12363 . + . ID=gene-L2557_RS07905;Name=L2557_RS07905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07905 NZ_JAIKUA010000107.1 Protein Homology CDS 11479 12363 . + 0 ID=cds-WP_075673880.1;Parent=gene-L2557_RS07905;Dbxref=GenBank:WP_075673880.1;Name=WP_075673880.1;Ontology_term=GO:0005975,GO:0016857;gbkey=CDS;go_function=racemase and epimerase activity%2C acting on carbohydrates and derivatives|0016857||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368016.1;locus_tag=L2557_RS07905;product=D-hexose-6-phosphate mutarotase;protein_id=WP_075673880.1;transl_table=11 NZ_JAIKUA010000107.1 RefSeq gene 12463 13215 . - . ID=gene-L2557_RS07910;Name=L2557_RS07910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07910 NZ_JAIKUA010000107.1 Protein Homology CDS 12463 13215 . - 0 ID=cds-WP_098942553.1;Parent=gene-L2557_RS07910;Dbxref=GenBank:WP_098942553.1;Name=WP_098942553.1;Ontology_term=GO:0009252,GO:0030674,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=protein-macromolecule adaptor activity|0030674||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243270.1;locus_tag=L2557_RS07910;product=MipA/OmpV family protein;protein_id=WP_098942553.1;transl_table=11 NZ_JAIKUA010000107.1 RefSeq gene 13310 15613 . - . ID=gene-L2557_RS07915;Name=hypF;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=L2557_RS07915 NZ_JAIKUA010000107.1 Protein Homology CDS 13310 15613 . - 0 ID=cds-WP_075673882.1;Parent=gene-L2557_RS07915;Dbxref=GenBank:WP_075673882.1;Name=WP_075673882.1;Ontology_term=GO:0036211,GO:0003998,GO:0016743,GO:0046872;gbkey=CDS;gene=hypF;go_function=acylphosphatase activity|0003998||IEA,carboxyl- or carbamoyltransferase activity|0016743||IEA,metal ion binding|0046872||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628056.1;locus_tag=L2557_RS07915;product=carbamoyltransferase HypF;protein_id=WP_075673882.1;transl_table=11 NZ_JAIKUA010000107.1 RefSeq gene 15663 16775 . - . ID=gene-L2557_RS07920;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=L2557_RS07920 NZ_JAIKUA010000107.1 Protein Homology CDS 15663 16775 . - 0 ID=cds-WP_075673883.1;Parent=gene-L2557_RS07920;Dbxref=GenBank:WP_075673883.1;Name=WP_075673883.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243272.1;locus_tag=L2557_RS07920;product=alanine racemase;protein_id=WP_075673883.1;transl_table=11 NZ_JAIKUA010000107.1 RefSeq gene 16789 18093 . - . ID=gene-L2557_RS07925;Name=L2557_RS07925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07925 NZ_JAIKUA010000107.1 Protein Homology CDS 16789 18093 . - 0 ID=cds-WP_075673884.1;Parent=gene-L2557_RS07925;Dbxref=GenBank:WP_075673884.1;Name=WP_075673884.1;Ontology_term=GO:0055130,GO:0008718,GO:0016491,GO:0071949;gbkey=CDS;go_function=D-amino-acid dehydrogenase activity|0008718||IEA,oxidoreductase activity|0016491||IEA,FAD binding|0071949||IEA;go_process=D-alanine catabolic process|0055130||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243273.1;locus_tag=L2557_RS07925;product=D-amino acid dehydrogenase;protein_id=WP_075673884.1;transl_table=11 ##sequence-region NZ_JAIKUA010000108.1 1 366 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000108.1 RefSeq region 1 366 . + . ID=NZ_JAIKUA010000108.1:1..366;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000108.1 RefSeq gene 1 366 . + . ID=gene-L2557_RS07930;Name=L2557_RS07930;end_range=366,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=L2557_RS07930;partial=true;start_range=.,1 NZ_JAIKUA010000108.1 cmsearch rRNA 1 366 . + . ID=rna-L2557_RS07930;Parent=gene-L2557_RS07930;Dbxref=RFAM:RF02541;end_range=366,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=L2557_RS07930;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JAIKUA010000108.1 cmsearch exon 1 366 . + . ID=exon-L2557_RS07930-1;Parent=rna-L2557_RS07930;Dbxref=RFAM:RF02541;end_range=366,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=L2557_RS07930;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JAIKUA010000109.1 1 22333 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000109.1 RefSeq region 1 22333 . + . ID=NZ_JAIKUA010000109.1:1..22333;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000109.1 RefSeq gene 239 529 . + . ID=gene-L2557_RS07935;Name=L2557_RS07935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07935 NZ_JAIKUA010000109.1 Protein Homology CDS 239 529 . + 0 ID=cds-WP_075673609.1;Parent=gene-L2557_RS07935;Dbxref=GenBank:WP_075673609.1;Name=WP_075673609.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905864.1;locus_tag=L2557_RS07935;product=GIY-YIG nuclease family protein;protein_id=WP_075673609.1;transl_table=11 NZ_JAIKUA010000109.1 RefSeq gene 532 1038 . - . ID=gene-L2557_RS07940;Name=L2557_RS07940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07940 NZ_JAIKUA010000109.1 Protein Homology CDS 532 1038 . - 0 ID=cds-WP_075673610.1;Parent=gene-L2557_RS07940;Dbxref=GenBank:WP_075673610.1;Name=WP_075673610.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535668.1;locus_tag=L2557_RS07940;product=GNAT family N-acetyltransferase;protein_id=WP_075673610.1;transl_table=11 NZ_JAIKUA010000109.1 RefSeq gene 1032 1565 . - . ID=gene-L2557_RS07945;Name=ubiT;gbkey=Gene;gene=ubiT;gene_biotype=protein_coding;locus_tag=L2557_RS07945 NZ_JAIKUA010000109.1 Protein Homology CDS 1032 1565 . - 0 ID=cds-WP_006535669.1;Parent=gene-L2557_RS07945;Dbxref=GenBank:WP_006535669.1;Name=WP_006535669.1;Ontology_term=GO:0006744,GO:0110142;gbkey=CDS;gene=ubiT;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535669.1;locus_tag=L2557_RS07945;product=ubiquinone anaerobic biosynthesis accessory factor UbiT;protein_id=WP_006535669.1;transl_table=11 NZ_JAIKUA010000109.1 RefSeq gene 1782 2777 . + . ID=gene-L2557_RS07950;Name=ubiU;gbkey=Gene;gene=ubiU;gene_biotype=protein_coding;locus_tag=L2557_RS07950 NZ_JAIKUA010000109.1 Protein Homology CDS 1782 2777 . + 0 ID=cds-WP_099660267.1;Parent=gene-L2557_RS07950;Dbxref=GenBank:WP_099660267.1;Name=WP_099660267.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiU;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457364.1;locus_tag=L2557_RS07950;product=ubiquinone anaerobic biosynthesis protein UbiU;protein_id=WP_099660267.1;transl_table=11 NZ_JAIKUA010000109.1 RefSeq gene 2791 3669 . + . ID=gene-L2557_RS07955;Name=L2557_RS07955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07955 NZ_JAIKUA010000109.1 Protein Homology CDS 2791 3669 . + 0 ID=cds-WP_075673612.1;Parent=gene-L2557_RS07955;Dbxref=GenBank:WP_075673612.1;Name=WP_075673612.1;Ontology_term=GO:0006744;gbkey=CDS;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368739.1;locus_tag=L2557_RS07955;product=U32 family peptidase;protein_id=WP_075673612.1;transl_table=11 NZ_JAIKUA010000109.1 RefSeq gene 3722 4885 . - . ID=gene-L2557_RS07960;Name=L2557_RS07960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07960 NZ_JAIKUA010000109.1 Protein Homology CDS 3722 4885 . - 0 ID=cds-WP_075673613.1;Parent=gene-L2557_RS07960;Dbxref=GenBank:WP_075673613.1;Name=WP_075673613.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004241399.1;locus_tag=L2557_RS07960;product=ABC transporter permease;protein_id=WP_075673613.1;transl_table=11 NZ_JAIKUA010000109.1 RefSeq gene 4885 6030 . - . ID=gene-L2557_RS07965;Name=L2557_RS07965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07965 NZ_JAIKUA010000109.1 Protein Homology CDS 4885 6030 . - 0 ID=cds-WP_075673614.1;Parent=gene-L2557_RS07965;Dbxref=GenBank:WP_075673614.1;Name=WP_075673614.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535674.1;locus_tag=L2557_RS07965;product=ABC transporter permease;protein_id=WP_075673614.1;transl_table=11 NZ_JAIKUA010000109.1 RefSeq gene 6040 7011 . - . ID=gene-L2557_RS07970;Name=L2557_RS07970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07970 NZ_JAIKUA010000109.1 Protein Homology CDS 6040 7011 . - 0 ID=cds-WP_075673615.1;Parent=gene-L2557_RS07970;Dbxref=GenBank:WP_075673615.1;Name=WP_075673615.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535675.1;locus_tag=L2557_RS07970;product=HlyD family secretion protein;protein_id=WP_075673615.1;transl_table=11 NZ_JAIKUA010000109.1 RefSeq gene 7246 8949 . + . ID=gene-L2557_RS07975;Name=L2557_RS07975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07975 NZ_JAIKUA010000109.1 Protein Homology CDS 7246 8949 . + 0 ID=cds-WP_075673616.1;Parent=gene-L2557_RS07975;Dbxref=GenBank:WP_075673616.1;Name=WP_075673616.1;Ontology_term=GO:0000160,GO:0071555,GO:0000155,GO:0004673,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246222.1;locus_tag=L2557_RS07975;product=sensor histidine kinase;protein_id=WP_075673616.1;transl_table=11 NZ_JAIKUA010000109.1 RefSeq gene 8952 9668 . + . ID=gene-L2557_RS07980;Name=btsR;gbkey=Gene;gene=btsR;gene_biotype=protein_coding;gene_synonym=yehT;locus_tag=L2557_RS07980 NZ_JAIKUA010000109.1 Protein Homology CDS 8952 9668 . + 0 ID=cds-WP_023583566.1;Parent=gene-L2557_RS07980;Dbxref=GenBank:WP_023583566.1;Name=WP_023583566.1;gbkey=CDS;gene=btsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986984.1;locus_tag=L2557_RS07980;product=two-component system response regulator BtsR;protein_id=WP_023583566.1;transl_table=11 NZ_JAIKUA010000109.1 RefSeq gene 9857 11713 . - . ID=gene-L2557_RS07985;Name=L2557_RS07985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07985 NZ_JAIKUA010000109.1 Protein Homology CDS 9857 11713 . - 0 ID=cds-WP_075673617.1;Parent=gene-L2557_RS07985;Dbxref=GenBank:WP_075673617.1;Name=WP_075673617.1;Ontology_term=GO:0000027,GO:0003724,GO:0005524;gbkey=CDS;go_function=RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246232.1;locus_tag=L2557_RS07985;product=DEAD/DEAH family ATP-dependent RNA helicase;protein_id=WP_075673617.1;transl_table=11 NZ_JAIKUA010000109.1 RefSeq gene 11885 12772 . - . ID=gene-L2557_RS07990;Name=nlpI;gbkey=Gene;gene=nlpI;gene_biotype=protein_coding;locus_tag=L2557_RS07990 NZ_JAIKUA010000109.1 Protein Homology CDS 11885 12772 . - 0 ID=cds-WP_099660268.1;Parent=gene-L2557_RS07990;Dbxref=GenBank:WP_099660268.1;Name=WP_099660268.1;Ontology_term=GO:0005515;gbkey=CDS;gene=nlpI;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462194.1;locus_tag=L2557_RS07990;product=lipoprotein NlpI;protein_id=WP_099660268.1;transl_table=11 NZ_JAIKUA010000109.1 RefSeq gene 12885 15014 . - . ID=gene-L2557_RS07995;Name=pnp;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=L2557_RS07995 NZ_JAIKUA010000109.1 Protein Homology CDS 12885 15014 . - 0 ID=cds-WP_099660269.1;Parent=gene-L2557_RS07995;Dbxref=GenBank:WP_099660269.1;Name=WP_099660269.1;Ontology_term=GO:0006402,GO:0003723,GO:0004654;gbkey=CDS;gene=pnp;go_function=RNA binding|0003723||IEA,polyribonucleotide nucleotidyltransferase activity|0004654||IEA;go_process=mRNA catabolic process|0006402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253004.1;locus_tag=L2557_RS07995;product=polyribonucleotide nucleotidyltransferase;protein_id=WP_099660269.1;transl_table=11 NZ_JAIKUA010000109.1 RefSeq gene 15265 15534 . - . ID=gene-L2557_RS08000;Name=rpsO;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=L2557_RS08000 NZ_JAIKUA010000109.1 Protein Homology CDS 15265 15534 . - 0 ID=cds-WP_072064551.1;Parent=gene-L2557_RS08000;Dbxref=GenBank:WP_072064551.1;Name=WP_072064551.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933502.1;locus_tag=L2557_RS08000;product=30S ribosomal protein S15;protein_id=WP_072064551.1;transl_table=11 NZ_JAIKUA010000109.1 RefSeq gene 15659 16612 . - . ID=gene-L2557_RS08005;Name=truB;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=L2557_RS08005 NZ_JAIKUA010000109.1 Protein Homology CDS 15659 16612 . - 0 ID=cds-WP_075673620.1;Parent=gene-L2557_RS08005;Dbxref=GenBank:WP_075673620.1;Name=WP_075673620.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truB;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535686.1;locus_tag=L2557_RS08005;product=tRNA pseudouridine(55) synthase TruB;protein_id=WP_075673620.1;transl_table=11 NZ_JAIKUA010000109.1 RefSeq gene 16612 17013 . - . ID=gene-L2557_RS08010;Name=rbfA;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=L2557_RS08010 NZ_JAIKUA010000109.1 Protein Homology CDS 16612 17013 . - 0 ID=cds-WP_006535687.1;Parent=gene-L2557_RS08010;Dbxref=GenBank:WP_006535687.1;Name=WP_006535687.1;Ontology_term=GO:0006364;gbkey=CDS;gene=rbfA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246236.1;locus_tag=L2557_RS08010;product=30S ribosome-binding factor RbfA;protein_id=WP_006535687.1;transl_table=11 NZ_JAIKUA010000109.1 RefSeq gene 17316 20072 . - . ID=gene-L2557_RS08015;Name=infB;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=L2557_RS08015 NZ_JAIKUA010000109.1 Protein Homology CDS 17316 20072 . - 0 ID=cds-WP_075673621.1;Parent=gene-L2557_RS08015;Dbxref=GenBank:WP_075673621.1;Name=WP_075673621.1;Ontology_term=GO:0006413,GO:0003743,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=infB;go_component=cytoplasm|0005737||IEA;go_function=translation initiation factor activity|0003743||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249603.1;locus_tag=L2557_RS08015;product=translation initiation factor IF-2;protein_id=WP_075673621.1;transl_table=11 NZ_JAIKUA010000109.1 RefSeq gene 20095 21603 . - . ID=gene-L2557_RS08020;Name=nusA;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=L2557_RS08020 NZ_JAIKUA010000109.1 Protein Homology CDS 20095 21603 . - 0 ID=cds-WP_006535691.1;Parent=gene-L2557_RS08020;Dbxref=GenBank:WP_006535691.1;Name=WP_006535691.1;Ontology_term=GO:0006353,GO:0003723;gbkey=CDS;gene=nusA;go_function=RNA binding|0003723||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004389232.1;locus_tag=L2557_RS08020;product=transcription termination factor NusA;protein_id=WP_006535691.1;transl_table=11 NZ_JAIKUA010000109.1 RefSeq gene 21624 22076 . - . ID=gene-L2557_RS08025;Name=rimP;gbkey=Gene;gene=rimP;gene_biotype=protein_coding;locus_tag=L2557_RS08025 NZ_JAIKUA010000109.1 Protein Homology CDS 21624 22076 . - 0 ID=cds-WP_036914691.1;Parent=gene-L2557_RS08025;Dbxref=GenBank:WP_036914691.1;Name=WP_036914691.1;Ontology_term=GO:0042274;gbkey=CDS;gene=rimP;go_process=ribosomal small subunit biogenesis|0042274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125659.1;locus_tag=L2557_RS08025;product=ribosome maturation factor RimP;protein_id=WP_036914691.1;transl_table=11 ##sequence-region NZ_JAIKUA010000011.1 1 25460 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000011.1 RefSeq region 1 25460 . + . ID=NZ_JAIKUA010000011.1:1..25460;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000011.1 RefSeq gene 100 696 . - . ID=gene-L2557_RS00875;Name=L2557_RS00875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00875 NZ_JAIKUA010000011.1 Protein Homology CDS 100 696 . - 0 ID=cds-WP_075671089.1;Parent=gene-L2557_RS00875;Dbxref=GenBank:WP_075671089.1;Name=WP_075671089.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367885.1;locus_tag=L2557_RS00875;product=Slp family lipoprotein;protein_id=WP_075671089.1;transl_table=11 NZ_JAIKUA010000011.1 RefSeq gene 789 1490 . - . ID=gene-L2557_RS00880;Name=tsaB;gbkey=Gene;gene=tsaB;gene_biotype=protein_coding;locus_tag=L2557_RS00880 NZ_JAIKUA010000011.1 Protein Homology CDS 789 1490 . - 0 ID=cds-WP_075671087.1;Parent=gene-L2557_RS00880;Dbxref=GenBank:WP_075671087.1;Name=WP_075671087.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaB;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536621.1;locus_tag=L2557_RS00880;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB;protein_id=WP_075671087.1;transl_table=11 NZ_JAIKUA010000011.1 RefSeq gene 1583 3526 . - . ID=gene-L2557_RS00885;Name=L2557_RS00885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00885 NZ_JAIKUA010000011.1 Protein Homology CDS 1583 3526 . - 0 ID=cds-WP_235409739.1;Parent=gene-L2557_RS00885;Dbxref=GenBank:WP_235409739.1;Name=WP_235409739.1;Ontology_term=GO:0003676,GO:0003677,GO:0004386,GO:0005524;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911324.1;locus_tag=L2557_RS00885;product=ATP-dependent DNA helicase;protein_id=WP_235409739.1;transl_table=11 NZ_JAIKUA010000011.1 RefSeq gene 3612 3956 . + . ID=gene-L2557_RS00890;Name=L2557_RS00890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00890 NZ_JAIKUA010000011.1 Protein Homology CDS 3612 3956 . + 0 ID=cds-WP_072068200.1;Parent=gene-L2557_RS00890;Dbxref=GenBank:WP_072068200.1;Name=WP_072068200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012145488.1;locus_tag=L2557_RS00890;product=RidA family protein;protein_id=WP_072068200.1;transl_table=11 NZ_JAIKUA010000011.1 RefSeq gene 3990 4853 . - . ID=gene-L2557_RS00895;Name=L2557_RS00895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00895 NZ_JAIKUA010000011.1 Protein Homology CDS 3990 4853 . - 0 ID=cds-WP_075671085.1;Parent=gene-L2557_RS00895;Dbxref=GenBank:WP_075671085.1;Name=WP_075671085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242772.1;locus_tag=L2557_RS00895;product=SDR family oxidoreductase;protein_id=WP_075671085.1;transl_table=11 NZ_JAIKUA010000011.1 RefSeq gene 5286 5618 . - . ID=gene-L2557_RS00900;Name=mdtI;gbkey=Gene;gene=mdtI;gene_biotype=protein_coding;locus_tag=L2557_RS00900 NZ_JAIKUA010000011.1 Protein Homology CDS 5286 5618 . - 0 ID=cds-WP_023582084.1;Parent=gene-L2557_RS00900;Dbxref=GenBank:WP_023582084.1;Name=WP_023582084.1;gbkey=CDS;gene=mdtI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247986.1;locus_tag=L2557_RS00900;product=multidrug/spermidine efflux SMR transporter subunit MdtI;protein_id=WP_023582084.1;transl_table=11 NZ_JAIKUA010000011.1 RefSeq gene 5621 6061 . - . ID=gene-L2557_RS00905;Name=mdtJ;gbkey=Gene;gene=mdtJ;gene_biotype=protein_coding;locus_tag=L2557_RS00905 NZ_JAIKUA010000011.1 Protein Homology CDS 5621 6061 . - 0 ID=cds-WP_075671146.1;Parent=gene-L2557_RS00905;Dbxref=GenBank:WP_075671146.1;Name=WP_075671146.1;Ontology_term=GO:0015848,GO:0015606,GO:0016020;gbkey=CDS;gene=mdtJ;go_component=membrane|0016020||IEA;go_function=spermidine transmembrane transporter activity|0015606||IEA;go_process=spermidine transport|0015848||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242769.1;locus_tag=L2557_RS00905;product=multidrug/spermidine efflux SMR transporter subunit MdtJ;protein_id=WP_075671146.1;transl_table=11 NZ_JAIKUA010000011.1 RefSeq gene 6630 8105 . - . ID=gene-L2557_RS00910;Name=zwf;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=L2557_RS00910 NZ_JAIKUA010000011.1 Protein Homology CDS 6630 8105 . - 0 ID=cds-WP_235409740.1;Parent=gene-L2557_RS00910;Dbxref=GenBank:WP_235409740.1;Name=WP_235409740.1;Ontology_term=GO:0006006,GO:0006098,GO:0004345,GO:0016614,GO:0050661;gbkey=CDS;gene=zwf;go_function=glucose-6-phosphate dehydrogenase activity|0004345||IEA,oxidoreductase activity%2C acting on CH-OH group of donors|0016614||IEA,NADP binding|0050661||IEA;go_process=glucose metabolic process|0006006||IEA,pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013317812.1;locus_tag=L2557_RS00910;product=glucose-6-phosphate dehydrogenase;protein_id=WP_235409740.1;transl_table=11 NZ_JAIKUA010000011.1 RefSeq gene 8457 9299 . + . ID=gene-L2557_RS00915;Name=L2557_RS00915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00915 NZ_JAIKUA010000011.1 Protein Homology CDS 8457 9299 . + 0 ID=cds-WP_075671081.1;Parent=gene-L2557_RS00915;Dbxref=GenBank:WP_075671081.1;Name=WP_075671081.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677,GO:0003700,GO:0097367;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,carbohydrate derivative binding|0097367||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367880.1;locus_tag=L2557_RS00915;product=MurR/RpiR family transcriptional regulator;protein_id=WP_075671081.1;transl_table=11 NZ_JAIKUA010000011.1 RefSeq gene 9531 10973 . + . ID=gene-L2557_RS00920;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=L2557_RS00920 NZ_JAIKUA010000011.1 Protein Homology CDS 9531 10973 . + 0 ID=cds-WP_075671079.1;Parent=gene-L2557_RS00920;Dbxref=GenBank:WP_075671079.1;Name=WP_075671079.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163038.1;locus_tag=L2557_RS00920;product=pyruvate kinase;protein_id=WP_075671079.1;transl_table=11 NZ_JAIKUA010000011.1 RefSeq gene 11056 12030 . - . ID=gene-L2557_RS00925;Name=lpxM;gbkey=Gene;gene=lpxM;gene_biotype=protein_coding;gene_synonym=msbB;locus_tag=L2557_RS00925 NZ_JAIKUA010000011.1 Protein Homology CDS 11056 12030 . - 0 ID=cds-WP_235409741.1;Parent=gene-L2557_RS00925;Dbxref=GenBank:WP_235409741.1;Name=WP_235409741.1;Note=LpxM is lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase%2C an enzyme characterized in Escherichia coli and involved in biosynthesis of the form of lipid A found in that species and some closely related species.;Ontology_term=GO:0009103,GO:0016747,GO:0009276,GO:0016020;gbkey=CDS;gene=lpxM;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628148.1;locus_tag=L2557_RS00925;product=lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase;protein_id=WP_235409741.1;transl_table=11 NZ_JAIKUA010000011.1 RefSeq gene 12136 13461 . - . ID=gene-L2557_RS00930;Name=mepM;gbkey=Gene;gene=mepM;gene_biotype=protein_coding;locus_tag=L2557_RS00930 NZ_JAIKUA010000011.1 Protein Homology CDS 12136 13461 . - 0 ID=cds-WP_099660353.1;Parent=gene-L2557_RS00930;Dbxref=GenBank:WP_099660353.1;Name=WP_099660353.1;Ontology_term=GO:0042834;gbkey=CDS;gene=mepM;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242759.1;locus_tag=L2557_RS00930;product=murein DD-endopeptidase MepM;protein_id=WP_099660353.1;transl_table=11 NZ_JAIKUA010000011.1 RefSeq gene 13474 14418 . - . ID=gene-L2557_RS00935;Name=znuA;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;locus_tag=L2557_RS00935 NZ_JAIKUA010000011.1 Protein Homology CDS 13474 14418 . - 0 ID=cds-WP_156733472.1;Parent=gene-L2557_RS00935;Dbxref=GenBank:WP_156733472.1;Name=WP_156733472.1;Ontology_term=GO:0006829,GO:0046872;gbkey=CDS;gene=znuA;go_function=metal ion binding|0046872||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242757.1;locus_tag=L2557_RS00935;product=zinc ABC transporter substrate-binding protein ZnuA;protein_id=WP_156733472.1;transl_table=11 NZ_JAIKUA010000011.1 RefSeq gene 14493 15218 . + . ID=gene-L2557_RS00940;Name=znuC;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;locus_tag=L2557_RS00940 NZ_JAIKUA010000011.1 Protein Homology CDS 14493 15218 . + 0 ID=cds-WP_075671071.1;Parent=gene-L2557_RS00940;Dbxref=GenBank:WP_075671071.1;Name=WP_075671071.1;Ontology_term=GO:0006829,GO:0005524,GO:0015633;gbkey=CDS;gene=znuC;go_function=ATP binding|0005524||IEA,ABC-type zinc transporter activity|0015633||IEA;go_process=zinc ion transport|0006829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827472.1;locus_tag=L2557_RS00940;product=zinc ABC transporter ATP-binding protein ZnuC;protein_id=WP_075671071.1;transl_table=11 NZ_JAIKUA010000011.1 RefSeq gene 15211 15996 . + . ID=gene-L2557_RS00945;Name=znuB;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;locus_tag=L2557_RS00945 NZ_JAIKUA010000011.1 Protein Homology CDS 15211 15996 . + 0 ID=cds-WP_075671069.1;Parent=gene-L2557_RS00945;Dbxref=GenBank:WP_075671069.1;Name=WP_075671069.1;Ontology_term=GO:0055085,GO:0042626;gbkey=CDS;gene=znuB;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242754.1;locus_tag=L2557_RS00945;product=zinc ABC transporter permease subunit ZnuB;protein_id=WP_075671069.1;transl_table=11 NZ_JAIKUA010000011.1 RefSeq gene 16095 16571 . - . ID=gene-L2557_RS00950;Name=L2557_RS00950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00950 NZ_JAIKUA010000011.1 Protein Homology CDS 16095 16571 . - 0 ID=cds-WP_235409742.1;Parent=gene-L2557_RS00950;Dbxref=GenBank:WP_235409742.1;Name=WP_235409742.1;Ontology_term=GO:0072570;gbkey=CDS;go_function=ADP-D-ribose binding|0072570||IEA;inference=COORDINATES: protein motif:HMM:NF013798.6;locus_tag=L2557_RS00950;product=macro domain-containing protein;protein_id=WP_235409742.1;transl_table=11 NZ_JAIKUA010000011.1 RefSeq gene 16606 17616 . - . ID=gene-L2557_RS00955;Name=ruvB;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=L2557_RS00955 NZ_JAIKUA010000011.1 Protein Homology CDS 16606 17616 . - 0 ID=cds-WP_075671065.1;Parent=gene-L2557_RS00955;Dbxref=GenBank:WP_075671065.1;Name=WP_075671065.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0005524,GO:0009378;gbkey=CDS;gene=ruvB;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242732.1;locus_tag=L2557_RS00955;product=Holliday junction branch migration DNA helicase RuvB;protein_id=WP_075671065.1;transl_table=11 NZ_JAIKUA010000011.1 RefSeq gene 17629 18249 . - . ID=gene-L2557_RS00960;Name=ruvA;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=L2557_RS00960 NZ_JAIKUA010000011.1 Protein Homology CDS 17629 18249 . - 0 ID=cds-WP_075671063.1;Parent=gene-L2557_RS00960;Dbxref=GenBank:WP_075671063.1;Name=WP_075671063.1;Ontology_term=GO:0006281,GO:0006310,GO:0003678,GO:0009378,GO:0009379;gbkey=CDS;gene=ruvA;go_component=Holliday junction helicase complex|0009379||IEA;go_function=DNA helicase activity|0003678||IEA,four-way junction helicase activity|0009378||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011146365.1;locus_tag=L2557_RS00960;product=Holliday junction branch migration protein RuvA;protein_id=WP_075671063.1;transl_table=11 NZ_JAIKUA010000011.1 RefSeq gene 18353 18874 . - . ID=gene-L2557_RS00965;Name=ruvC;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=L2557_RS00965 NZ_JAIKUA010000011.1 Protein Homology CDS 18353 18874 . - 0 ID=cds-WP_006536599.1;Parent=gene-L2557_RS00965;Dbxref=GenBank:WP_006536599.1;Name=WP_006536599.1;Ontology_term=GO:0006310,GO:0008821;gbkey=CDS;gene=ruvC;go_function=crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007677938.1;locus_tag=L2557_RS00965;product=crossover junction endodeoxyribonuclease RuvC;protein_id=WP_006536599.1;transl_table=11 NZ_JAIKUA010000011.1 RefSeq gene 18999 19754 . - . ID=gene-L2557_RS00970;Name=L2557_RS00970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00970 NZ_JAIKUA010000011.1 Protein Homology CDS 18999 19754 . - 0 ID=cds-WP_023582074.1;Parent=gene-L2557_RS00970;Dbxref=GenBank:WP_023582074.1;Name=WP_023582074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242729.1;locus_tag=L2557_RS00970;product=YebC/PmpR family DNA-binding transcriptional regulator;protein_id=WP_023582074.1;transl_table=11 NZ_JAIKUA010000011.1 RefSeq gene 19782 20216 . - . ID=gene-L2557_RS00975;Name=nudB;gbkey=Gene;gene=nudB;gene_biotype=protein_coding;locus_tag=L2557_RS00975 NZ_JAIKUA010000011.1 Protein Homology CDS 19782 20216 . - 0 ID=cds-WP_075671061.1;Parent=gene-L2557_RS00975;Dbxref=GenBank:WP_075671061.1;Name=WP_075671061.1;Ontology_term=GO:0046656,GO:0008828,GO:0019177;gbkey=CDS;gene=nudB;go_function=dATP diphosphatase activity|0008828||IEA,dihydroneopterin triphosphate pyrophosphohydrolase activity|0019177||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247981.1;locus_tag=L2557_RS00975;product=dihydroneopterin triphosphate diphosphatase;protein_id=WP_075671061.1;transl_table=11 NZ_JAIKUA010000011.1 RefSeq gene 20220 22004 . - . ID=gene-L2557_RS00980;Name=aspS;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=L2557_RS00980 NZ_JAIKUA010000011.1 Protein Homology CDS 20220 22004 . - 0 ID=cds-WP_075671059.1;Parent=gene-L2557_RS00980;Dbxref=GenBank:WP_075671059.1;Name=WP_075671059.1;Ontology_term=GO:0006418,GO:0000166,GO:0004812,GO:0005524,GO:0016874;gbkey=CDS;gene=aspS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251370.1;locus_tag=L2557_RS00980;product=aspartate--tRNA ligase;protein_id=WP_075671059.1;transl_table=11 NZ_JAIKUA010000011.1 RefSeq gene 22271 22669 . + . ID=gene-L2557_RS00985;Name=L2557_RS00985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00985 NZ_JAIKUA010000011.1 Protein Homology CDS 22271 22669 . + 0 ID=cds-WP_075671057.1;Parent=gene-L2557_RS00985;Dbxref=GenBank:WP_075671057.1;Name=WP_075671057.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242719.1;locus_tag=L2557_RS00985;product=MAPEG family protein;protein_id=WP_075671057.1;transl_table=11 NZ_JAIKUA010000011.1 RefSeq gene 22857 23609 . + . ID=gene-L2557_RS00990;Name=cmoA;gbkey=Gene;gene=cmoA;gene_biotype=protein_coding;locus_tag=L2557_RS00990 NZ_JAIKUA010000011.1 Protein Homology CDS 22857 23609 . + 0 ID=cds-WP_075671144.1;Parent=gene-L2557_RS00990;Dbxref=GenBank:WP_075671144.1;Name=WP_075671144.1;gbkey=CDS;gene=cmoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015834611.1;locus_tag=L2557_RS00990;product=carboxy-S-adenosyl-L-methionine synthase CmoA;protein_id=WP_075671144.1;transl_table=11 NZ_JAIKUA010000011.1 RefSeq gene 23609 24583 . + . ID=gene-L2557_RS00995;Name=cmoB;gbkey=Gene;gene=cmoB;gene_biotype=protein_coding;locus_tag=L2557_RS00995 NZ_JAIKUA010000011.1 Protein Homology CDS 23609 24583 . + 0 ID=cds-WP_109419830.1;Parent=gene-L2557_RS00995;Dbxref=GenBank:WP_109419830.1;Name=WP_109419830.1;Ontology_term=GO:0002098,GO:0016765;gbkey=CDS;gene=cmoB;go_function=transferase activity%2C transferring alkyl or aryl (other than methyl) groups|0016765||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242717.1;locus_tag=L2557_RS00995;product=tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;protein_id=WP_109419830.1;transl_table=11 NZ_JAIKUA010000011.1 RefSeq gene 24739 25460 . + . ID=gene-L2557_RS01000;Name=L2557_RS01000;end_range=25460,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01000;partial=true NZ_JAIKUA010000011.1 GeneMarkS-2+ CDS 24739 25460 . + 0 ID=cds-WP_235409743.1;Parent=gene-L2557_RS01000;Dbxref=GenBank:WP_235409743.1;Name=WP_235409743.1;end_range=25460,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS01000;partial=true;product=hypothetical protein;protein_id=WP_235409743.1;transl_table=11 ##sequence-region NZ_JAIKUA010000110.1 1 3922 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000110.1 RefSeq region 1 3922 . + . ID=NZ_JAIKUA010000110.1:1..3922;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000110.1 RefSeq gene 103 1047 . + . ID=gene-L2557_RS08030;Name=cbpA;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=L2557_RS08030 NZ_JAIKUA010000110.1 Protein Homology CDS 103 1047 . + 0 ID=cds-WP_099659749.1;Parent=gene-L2557_RS08030;Dbxref=GenBank:WP_099659749.1;Name=WP_099659749.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=cbpA;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247010.1;locus_tag=L2557_RS08030;product=curved DNA-binding protein;protein_id=WP_099659749.1;transl_table=11 NZ_JAIKUA010000110.1 RefSeq gene 1047 1352 . + . ID=gene-L2557_RS08035;Name=cbpM;gbkey=Gene;gene=cbpM;gene_biotype=protein_coding;locus_tag=L2557_RS08035 NZ_JAIKUA010000110.1 Protein Homology CDS 1047 1352 . + 0 ID=cds-WP_099659748.1;Parent=gene-L2557_RS08035;Dbxref=GenBank:WP_099659748.1;Name=WP_099659748.1;gbkey=CDS;gene=cbpM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001307705.1;locus_tag=L2557_RS08035;product=chaperone modulator CbpM;protein_id=WP_099659748.1;transl_table=11 NZ_JAIKUA010000110.1 RefSeq gene 1634 2908 . + . ID=gene-L2557_RS08040;Name=L2557_RS08040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08040 NZ_JAIKUA010000110.1 Protein Homology CDS 1634 2908 . + 0 ID=cds-WP_235409979.1;Parent=gene-L2557_RS08040;Dbxref=GenBank:WP_235409979.1;Name=WP_235409979.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537341.1;locus_tag=L2557_RS08040;product=amidohydrolase;protein_id=WP_235409979.1;transl_table=11 NZ_JAIKUA010000110.1 RefSeq gene 2960 3892 . - . ID=gene-L2557_RS08045;Name=L2557_RS08045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08045 NZ_JAIKUA010000110.1 Protein Homology CDS 2960 3892 . - 0 ID=cds-WP_235409980.1;Parent=gene-L2557_RS08045;Dbxref=GenBank:WP_235409980.1;Name=WP_235409980.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF015431.6;locus_tag=L2557_RS08045;product=LysR family transcriptional regulator;protein_id=WP_235409980.1;transl_table=11 ##sequence-region NZ_JAIKUA010000111.1 1 2850 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000111.1 RefSeq region 1 2850 . + . ID=NZ_JAIKUA010000111.1:1..2850;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000111.1 RefSeq gene 61 1611 . + . ID=gene-L2557_RS08050;Name=L2557_RS08050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08050 NZ_JAIKUA010000111.1 Protein Homology CDS 61 1611 . + 0 ID=cds-WP_099659334.1;Parent=gene-L2557_RS08050;Dbxref=GenBank:WP_099659334.1;Name=WP_099659334.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014171604.1;locus_tag=L2557_RS08050;product=methyl-accepting chemotaxis protein;protein_id=WP_099659334.1;transl_table=11 NZ_JAIKUA010000111.1 RefSeq gene 2009 2212 . - . ID=gene-L2557_RS08055;Name=L2557_RS08055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08055 NZ_JAIKUA010000111.1 Protein Homology CDS 2009 2212 . - 0 ID=cds-WP_075670878.1;Parent=gene-L2557_RS08055;Dbxref=GenBank:WP_075670878.1;Name=WP_075670878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244007.1;locus_tag=L2557_RS08055;product=hypothetical protein;protein_id=WP_075670878.1;transl_table=11 NZ_JAIKUA010000111.1 RefSeq gene 2521 2730 . - . ID=gene-L2557_RS08060;Name=L2557_RS08060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08060 NZ_JAIKUA010000111.1 Protein Homology CDS 2521 2730 . - 0 ID=cds-WP_075670880.1;Parent=gene-L2557_RS08060;Dbxref=GenBank:WP_075670880.1;Name=WP_075670880.1;Ontology_term=GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244005.1;locus_tag=L2557_RS08060;product=sigma-S stabilization anti-adapter protein IraP;protein_id=WP_075670880.1;transl_table=11 ##sequence-region NZ_JAIKUA010000112.1 1 9791 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000112.1 RefSeq region 1 9791 . + . ID=NZ_JAIKUA010000112.1:1..9791;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000112.1 RefSeq gene 141 776 . - . ID=gene-L2557_RS08065;Name=ompW;gbkey=Gene;gene=ompW;gene_biotype=protein_coding;locus_tag=L2557_RS08065 NZ_JAIKUA010000112.1 Protein Homology CDS 141 776 . - 0 ID=cds-WP_006536979.1;Parent=gene-L2557_RS08065;Dbxref=GenBank:WP_006536979.1;Name=WP_006536979.1;Ontology_term=GO:0019867;gbkey=CDS;gene=ompW;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536979.1;locus_tag=L2557_RS08065;product=outer membrane protein OmpW;protein_id=WP_006536979.1;transl_table=11 NZ_JAIKUA010000112.1 RefSeq gene 1212 1985 . + . ID=gene-L2557_RS08070;Name=L2557_RS08070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08070 NZ_JAIKUA010000112.1 Protein Homology CDS 1212 1985 . + 0 ID=cds-WP_075672118.1;Parent=gene-L2557_RS08070;Dbxref=GenBank:WP_075672118.1;Name=WP_075672118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243072.1;locus_tag=L2557_RS08070;product=YciC family protein;protein_id=WP_075672118.1;transl_table=11 NZ_JAIKUA010000112.1 RefSeq gene 2102 3922 . - . ID=gene-L2557_RS08075;Name=L2557_RS08075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08075 NZ_JAIKUA010000112.1 Protein Homology CDS 2102 3922 . - 0 ID=cds-WP_223672446.1;Parent=gene-L2557_RS08075;Dbxref=GenBank:WP_223672446.1;Name=WP_223672446.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827684.1;locus_tag=L2557_RS08075;product=SulP family inorganic anion transporter;protein_id=WP_223672446.1;transl_table=11 NZ_JAIKUA010000112.1 RefSeq pseudogene 4232 4780 . + . ID=gene-L2557_RS08080;Name=L2557_RS08080;end_range=4780,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS08080;partial=true;pseudo=true NZ_JAIKUA010000112.1 Protein Homology CDS 4232 4780 . + 0 ID=cds-L2557_RS08080;Parent=gene-L2557_RS08080;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=4780,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210640.1;locus_tag=L2557_RS08080;partial=true;product=septation protein A;pseudo=true;transl_table=11 NZ_JAIKUA010000112.1 RefSeq gene 5152 5583 . + . ID=gene-L2557_RS08085;Name=yciA;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=L2557_RS08085 NZ_JAIKUA010000112.1 Protein Homology CDS 5152 5583 . + 0 ID=cds-WP_006536988.1;Parent=gene-L2557_RS08085;Dbxref=GenBank:WP_006536988.1;Name=WP_006536988.1;Ontology_term=GO:0016790;gbkey=CDS;gene=yciA;go_function=thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243075.1;locus_tag=L2557_RS08085;product=acyl-CoA thioester hydrolase YciA;protein_id=WP_006536988.1;transl_table=11 NZ_JAIKUA010000112.1 RefSeq gene 5727 6446 . - . ID=gene-L2557_RS08090;Name=tonB;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=L2557_RS08090 NZ_JAIKUA010000112.1 Protein Homology CDS 5727 6446 . - 0 ID=cds-WP_099659689.1;Parent=gene-L2557_RS08090;Dbxref=GenBank:WP_099659689.1;Name=WP_099659689.1;gbkey=CDS;gene=tonB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367972.1;locus_tag=L2557_RS08090;product=TonB system transport protein TonB;protein_id=WP_099659689.1;transl_table=11 NZ_JAIKUA010000112.1 RefSeq gene 6559 6741 . - . ID=gene-L2557_RS08095;Name=L2557_RS08095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08095 NZ_JAIKUA010000112.1 Protein Homology CDS 6559 6741 . - 0 ID=cds-WP_036913581.1;Parent=gene-L2557_RS08095;Dbxref=GenBank:WP_036913581.1;Name=WP_036913581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911035.1;locus_tag=L2557_RS08095;product=YciY family protein;protein_id=WP_036913581.1;transl_table=11 NZ_JAIKUA010000112.1 RefSeq gene 7047 8507 . + . ID=gene-L2557_RS08100;Name=cls;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=L2557_RS08100 NZ_JAIKUA010000112.1 Protein Homology CDS 7047 8507 . + 0 ID=cds-WP_075672124.1;Parent=gene-L2557_RS08100;Dbxref=GenBank:WP_075672124.1;Name=WP_075672124.1;Ontology_term=GO:0032049,GO:0008808,GO:0016780;gbkey=CDS;gene=cls;go_function=cardiolipin synthase activity|0008808||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304089.1;locus_tag=L2557_RS08100;product=cardiolipin synthase;protein_id=WP_075672124.1;transl_table=11 NZ_JAIKUA010000112.1 RefSeq gene 8617 8946 . + . ID=gene-L2557_RS08105;Name=L2557_RS08105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08105 NZ_JAIKUA010000112.1 Protein Homology CDS 8617 8946 . + 0 ID=cds-WP_369961051.1;Parent=gene-L2557_RS08105;Dbxref=GenBank:WP_369961051.1;Name=WP_369961051.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020218773.1;locus_tag=L2557_RS08105;product=HI1450 family dsDNA-mimic protein;protein_id=WP_369961051.1;transl_table=11 NZ_JAIKUA010000112.1 RefSeq gene 9008 9205 . + . ID=gene-L2557_RS08110;Name=L2557_RS08110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08110 NZ_JAIKUA010000112.1 GeneMarkS-2+ CDS 9008 9205 . + 0 ID=cds-WP_075672126.1;Parent=gene-L2557_RS08110;Dbxref=GenBank:WP_075672126.1;Name=WP_075672126.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS08110;product=hypothetical protein;protein_id=WP_075672126.1;transl_table=11 NZ_JAIKUA010000112.1 RefSeq gene 9294 9725 . - . ID=gene-L2557_RS08115;Name=L2557_RS08115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08115 NZ_JAIKUA010000112.1 Protein Homology CDS 9294 9725 . - 0 ID=cds-WP_075672128.1;Parent=gene-L2557_RS08115;Dbxref=GenBank:WP_075672128.1;Name=WP_075672128.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004238532.1;locus_tag=L2557_RS08115;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_075672128.1;transl_table=11 ##sequence-region NZ_JAIKUA010000113.1 1 6776 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000113.1 RefSeq region 1 6776 . + . ID=NZ_JAIKUA010000113.1:1..6776;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000113.1 RefSeq gene 29 580 . + . ID=gene-L2557_RS08120;Name=L2557_RS08120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08120 NZ_JAIKUA010000113.1 Protein Homology CDS 29 580 . + 0 ID=cds-WP_099660368.1;Parent=gene-L2557_RS08120;Dbxref=GenBank:WP_099660368.1;Name=WP_099660368.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF012635.6;locus_tag=L2557_RS08120;product=fimbrial protein;protein_id=WP_099660368.1;transl_table=11 NZ_JAIKUA010000113.1 RefSeq gene 663 995 . - . ID=gene-L2557_RS08125;Name=L2557_RS08125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08125 NZ_JAIKUA010000113.1 Protein Homology CDS 663 995 . - 0 ID=cds-WP_075671127.1;Parent=gene-L2557_RS08125;Dbxref=GenBank:WP_075671127.1;Name=WP_075671127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248000.1;locus_tag=L2557_RS08125;product=YdbL family probable chaperone protein;protein_id=WP_075671127.1;transl_table=11 NZ_JAIKUA010000113.1 RefSeq gene 1006 1212 . - . ID=gene-L2557_RS08130;Name=L2557_RS08130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08130 NZ_JAIKUA010000113.1 Protein Homology CDS 1006 1212 . - 0 ID=cds-WP_371317006.1;Parent=gene-L2557_RS08130;Dbxref=GenBank:WP_371317006.1;Name=WP_371317006.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242803.1;locus_tag=L2557_RS08130;product=YnbE family lipoprotein;protein_id=WP_371317006.1;transl_table=11 NZ_JAIKUA010000113.1 RefSeq gene 1209 3845 . - . ID=gene-L2557_RS08135;Name=L2557_RS08135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08135 NZ_JAIKUA010000113.1 Protein Homology CDS 1209 3845 . - 0 ID=cds-WP_223673618.1;Parent=gene-L2557_RS08135;Dbxref=GenBank:WP_223673618.1;Name=WP_223673618.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628142.1;locus_tag=L2557_RS08135;product=YdbH family protein;protein_id=WP_223673618.1;transl_table=11 NZ_JAIKUA010000113.1 RefSeq gene 3994 4992 . + . ID=gene-L2557_RS08140;Name=L2557_RS08140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08140 NZ_JAIKUA010000113.1 Protein Homology CDS 3994 4992 . + 0 ID=cds-WP_075671123.1;Parent=gene-L2557_RS08140;Dbxref=GenBank:WP_075671123.1;Name=WP_075671123.1;Ontology_term=GO:0008720,GO:0070404;gbkey=CDS;go_function=D-lactate dehydrogenase (NAD+) activity|0008720||IEA,NADH binding|0070404||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628143.1;locus_tag=L2557_RS08140;product=2-hydroxyacid dehydrogenase;protein_id=WP_075671123.1;transl_table=11 NZ_JAIKUA010000113.1 RefSeq gene 5082 6680 . - . ID=gene-L2557_RS08145;Name=L2557_RS08145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08145 NZ_JAIKUA010000113.1 Protein Homology CDS 5082 6680 . - 0 ID=cds-WP_099660365.1;Parent=gene-L2557_RS08145;Dbxref=GenBank:WP_099660365.1;Name=WP_099660365.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247997.1;locus_tag=L2557_RS08145;product=methyl-accepting chemotaxis protein;protein_id=WP_099660365.1;transl_table=11 ##sequence-region NZ_JAIKUA010000114.1 1 16388 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000114.1 RefSeq region 1 16388 . + . ID=NZ_JAIKUA010000114.1:1..16388;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000114.1 RefSeq gene 227 430 . + . ID=gene-L2557_RS17970;Name=L2557_RS17970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17970 NZ_JAIKUA010000114.1 Protein Homology CDS 227 430 . + 0 ID=cds-WP_036904935.1;Parent=gene-L2557_RS17970;Dbxref=GenBank:WP_036904935.1;Name=WP_036904935.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025005.6;locus_tag=L2557_RS17970;product=KTSC domain-containing protein;protein_id=WP_036904935.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 677 1144 . - . ID=gene-L2557_RS08150;Name=L2557_RS08150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08150 NZ_JAIKUA010000114.1 Protein Homology CDS 677 1144 . - 0 ID=cds-WP_235409981.1;Parent=gene-L2557_RS08150;Dbxref=GenBank:WP_235409981.1;Name=WP_235409981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658154.1;locus_tag=L2557_RS08150;product=lysis protein;protein_id=WP_235409981.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 1131 1463 . - . ID=gene-L2557_RS08155;Name=L2557_RS08155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08155 NZ_JAIKUA010000114.1 Protein Homology CDS 1131 1463 . - 0 ID=cds-WP_099660112.1;Parent=gene-L2557_RS08155;Dbxref=GenBank:WP_099660112.1;Name=WP_099660112.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007710822.1;locus_tag=L2557_RS08155;product=M15 family metallopeptidase;protein_id=WP_099660112.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 1450 1743 . - . ID=gene-L2557_RS08160;Name=L2557_RS08160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08160 NZ_JAIKUA010000114.1 Protein Homology CDS 1450 1743 . - 0 ID=cds-WP_049257602.1;Parent=gene-L2557_RS08160;Dbxref=GenBank:WP_049257602.1;Name=WP_049257602.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017281.6;locus_tag=L2557_RS08160;product=phage holin family protein;protein_id=WP_049257602.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 1740 2129 . - . ID=gene-L2557_RS08165;Name=L2557_RS08165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08165 NZ_JAIKUA010000114.1 Protein Homology CDS 1740 2129 . - 0 ID=cds-WP_004916901.1;Parent=gene-L2557_RS08165;Dbxref=GenBank:WP_004916901.1;Name=WP_004916901.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004916901.1;locus_tag=L2557_RS08165;product=putative holin;protein_id=WP_004916901.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 2259 2501 . + . ID=gene-L2557_RS08170;Name=L2557_RS08170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08170 NZ_JAIKUA010000114.1 Protein Homology CDS 2259 2501 . + 0 ID=cds-WP_058336245.1;Parent=gene-L2557_RS08170;Dbxref=GenBank:WP_058336245.1;Name=WP_058336245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656500.1;locus_tag=L2557_RS08170;product=hypothetical protein;protein_id=WP_058336245.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 2505 2720 . - . ID=gene-L2557_RS08175;Name=L2557_RS08175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08175 NZ_JAIKUA010000114.1 Protein Homology CDS 2505 2720 . - 0 ID=cds-WP_099660111.1;Parent=gene-L2557_RS08175;Dbxref=GenBank:WP_099660111.1;Name=WP_099660111.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918410.1;locus_tag=L2557_RS08175;product=hypothetical protein;protein_id=WP_099660111.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 3348 4514 . - . ID=gene-L2557_RS08180;Name=L2557_RS08180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08180 NZ_JAIKUA010000114.1 Protein Homology CDS 3348 4514 . - 0 ID=cds-WP_235409982.1;Parent=gene-L2557_RS08180;Dbxref=GenBank:WP_235409982.1;Name=WP_235409982.1;Ontology_term=GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015854945.1;locus_tag=L2557_RS08180;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_235409982.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 4755 5138 . - . ID=gene-L2557_RS08185;Name=L2557_RS08185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08185 NZ_JAIKUA010000114.1 Protein Homology CDS 4755 5138 . - 0 ID=cds-WP_135022270.1;Parent=gene-L2557_RS08185;Dbxref=GenBank:WP_135022270.1;Name=WP_135022270.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001345623.1;locus_tag=L2557_RS08185;product=antiterminator Q family protein;protein_id=WP_135022270.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 5167 6192 . - . ID=gene-L2557_RS08190;Name=L2557_RS08190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08190 NZ_JAIKUA010000114.1 Protein Homology CDS 5167 6192 . - 0 ID=cds-WP_156733936.1;Parent=gene-L2557_RS08190;Dbxref=GenBank:WP_156733936.1;Name=WP_156733936.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628374.1;locus_tag=L2557_RS08190;product=DUF968 domain-containing protein;protein_id=WP_156733936.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 6189 6995 . - . ID=gene-L2557_RS08195;Name=L2557_RS08195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08195 NZ_JAIKUA010000114.1 Protein Homology CDS 6189 6995 . - 0 ID=cds-WP_156733236.1;Parent=gene-L2557_RS08195;Dbxref=GenBank:WP_156733236.1;Name=WP_156733236.1;Ontology_term=GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628375.1;locus_tag=L2557_RS08195;product=KilA-N domain-containing protein;protein_id=WP_156733236.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 7014 7397 . - . ID=gene-L2557_RS08200;Name=L2557_RS08200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08200 NZ_JAIKUA010000114.1 Protein Homology CDS 7014 7397 . - 0 ID=cds-WP_036904907.1;Parent=gene-L2557_RS08200;Dbxref=GenBank:WP_036904907.1;Name=WP_036904907.1;Ontology_term=GO:0006281,GO:0006310,GO:0000287,GO:0000400,GO:0008821;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,four-way junction DNA binding|0000400||IEA,crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827291.1;locus_tag=L2557_RS08200;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_036904907.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 7470 7862 . - . ID=gene-L2557_RS08205;Name=L2557_RS08205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08205 NZ_JAIKUA010000114.1 Protein Homology CDS 7470 7862 . - 0 ID=cds-WP_006533945.1;Parent=gene-L2557_RS08205;Dbxref=GenBank:WP_006533945.1;Name=WP_006533945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533945.1;locus_tag=L2557_RS08205;product=hypothetical protein;protein_id=WP_006533945.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 7859 8497 . - . ID=gene-L2557_RS08210;Name=L2557_RS08210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08210 NZ_JAIKUA010000114.1 Protein Homology CDS 7859 8497 . - 0 ID=cds-WP_235409983.1;Parent=gene-L2557_RS08210;Dbxref=GenBank:WP_235409983.1;Name=WP_235409983.1;Ontology_term=GO:0009307,GO:0003677,GO:0009007;gbkey=CDS;go_function=DNA binding|0003677||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812609.1;locus_tag=L2557_RS08210;product=phage N-6-adenine-methyltransferase;protein_id=WP_235409983.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 8494 9624 . - . ID=gene-L2557_RS08215;Name=L2557_RS08215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08215 NZ_JAIKUA010000114.1 Protein Homology CDS 8494 9624 . - 0 ID=cds-WP_235409984.1;Parent=gene-L2557_RS08215;Dbxref=GenBank:WP_235409984.1;Name=WP_235409984.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827294.1;locus_tag=L2557_RS08215;product=replication protein 15;protein_id=WP_235409984.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 9634 9813 . - . ID=gene-L2557_RS08220;Name=L2557_RS08220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08220 NZ_JAIKUA010000114.1 Protein Homology CDS 9634 9813 . - 0 ID=cds-WP_235409985.1;Parent=gene-L2557_RS08220;Dbxref=GenBank:WP_235409985.1;Name=WP_235409985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827295.1;locus_tag=L2557_RS08220;product=DUF4222 domain-containing protein;protein_id=WP_235409985.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 9803 9982 . - . ID=gene-L2557_RS08225;Name=L2557_RS08225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08225 NZ_JAIKUA010000114.1 Protein Homology CDS 9803 9982 . - 0 ID=cds-WP_100160160.1;Parent=gene-L2557_RS08225;Dbxref=GenBank:WP_100160160.1;Name=WP_100160160.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251659.1;locus_tag=L2557_RS08225;product=hypothetical protein;protein_id=WP_100160160.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 10071 10529 . - . ID=gene-L2557_RS08230;Name=L2557_RS08230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08230 NZ_JAIKUA010000114.1 Protein Homology CDS 10071 10529 . - 0 ID=cds-WP_099659595.1;Parent=gene-L2557_RS08230;Dbxref=GenBank:WP_099659595.1;Name=WP_099659595.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827296.1;locus_tag=L2557_RS08230;product=YmfL family putative regulatory protein;protein_id=WP_099659595.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 10568 10795 . - . ID=gene-L2557_RS08235;Name=L2557_RS08235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08235 NZ_JAIKUA010000114.1 Protein Homology CDS 10568 10795 . - 0 ID=cds-WP_023582536.1;Parent=gene-L2557_RS08235;Dbxref=GenBank:WP_023582536.1;Name=WP_023582536.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001191665.1;locus_tag=L2557_RS08235;product=helix-turn-helix domain-containing protein;protein_id=WP_023582536.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 10891 11547 . + . ID=gene-L2557_RS08240;Name=L2557_RS08240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08240 NZ_JAIKUA010000114.1 Protein Homology CDS 10891 11547 . + 0 ID=cds-WP_198585723.1;Parent=gene-L2557_RS08240;Dbxref=GenBank:WP_198585723.1;Name=WP_198585723.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147142.1;locus_tag=L2557_RS08240;product=XRE family transcriptional regulator;protein_id=WP_198585723.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 11654 12535 . + . ID=gene-L2557_RS08245;Name=L2557_RS08245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08245 NZ_JAIKUA010000114.1 GeneMarkS-2+ CDS 11654 12535 . + 0 ID=cds-WP_235409986.1;Parent=gene-L2557_RS08245;Dbxref=GenBank:WP_235409986.1;Name=WP_235409986.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS08245;product=hypothetical protein;protein_id=WP_235409986.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 12510 12959 . + . ID=gene-L2557_RS08250;Name=L2557_RS08250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08250 NZ_JAIKUA010000114.1 GeneMarkS-2+ CDS 12510 12959 . + 0 ID=cds-WP_100159836.1;Parent=gene-L2557_RS08250;Dbxref=GenBank:WP_100159836.1;Name=WP_100159836.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS08250;product=hypothetical protein;protein_id=WP_100159836.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 13196 13399 . + . ID=gene-L2557_RS08255;Name=L2557_RS08255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08255 NZ_JAIKUA010000114.1 Protein Homology CDS 13196 13399 . + 0 ID=cds-WP_235409987.1;Parent=gene-L2557_RS08255;Dbxref=GenBank:WP_235409987.1;Name=WP_235409987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533954.1;locus_tag=L2557_RS08255;product=hypothetical protein;protein_id=WP_235409987.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 13619 13993 . + . ID=gene-L2557_RS08260;Name=L2557_RS08260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08260 NZ_JAIKUA010000114.1 Protein Homology CDS 13619 13993 . + 0 ID=cds-WP_006533955.1;Parent=gene-L2557_RS08260;Dbxref=GenBank:WP_006533955.1;Name=WP_006533955.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533955.1;locus_tag=L2557_RS08260;product=hypothetical protein;protein_id=WP_006533955.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 14059 14886 . + . ID=gene-L2557_RS08265;Name=L2557_RS08265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08265 NZ_JAIKUA010000114.1 Protein Homology CDS 14059 14886 . + 0 ID=cds-WP_156733939.1;Parent=gene-L2557_RS08265;Dbxref=GenBank:WP_156733939.1;Name=WP_156733939.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001753233.1;locus_tag=L2557_RS08265;product=YfdQ family protein;protein_id=WP_156733939.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 14945 15442 . + . ID=gene-L2557_RS08270;Name=ssb;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=L2557_RS08270 NZ_JAIKUA010000114.1 Protein Homology CDS 14945 15442 . + 0 ID=cds-WP_156733941.1;Parent=gene-L2557_RS08270;Dbxref=GenBank:WP_156733941.1;Name=WP_156733941.1;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0006351,GO:0003697;gbkey=CDS;gene=ssb;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827302.1;locus_tag=L2557_RS08270;product=single-stranded DNA-binding protein;protein_id=WP_156733941.1;transl_table=11 NZ_JAIKUA010000114.1 RefSeq gene 15511 16191 . + . ID=gene-L2557_RS08275;Name=L2557_RS08275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08275 NZ_JAIKUA010000114.1 GeneMarkS-2+ CDS 15511 16191 . + 0 ID=cds-WP_156733943.1;Parent=gene-L2557_RS08275;Dbxref=GenBank:WP_156733943.1;Name=WP_156733943.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS08275;product=hypothetical protein;protein_id=WP_156733943.1;transl_table=11 ##sequence-region NZ_JAIKUA010000115.1 1 29225 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000115.1 RefSeq region 1 29225 . + . ID=NZ_JAIKUA010000115.1:1..29225;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000115.1 RefSeq gene 1 748 . - . ID=gene-L2557_RS08280;Name=L2557_RS08280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08280;partial=true;start_range=.,1 NZ_JAIKUA010000115.1 Protein Homology CDS 1 748 . - 0 ID=cds-WP_075673354.1;Parent=gene-L2557_RS08280;Dbxref=GenBank:WP_075673354.1;Name=WP_075673354.1;Ontology_term=GO:0005524,GO:0015420,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type vitamin B12 transporter activity|0015420||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: protein motif:HMM:NF012235.6;locus_tag=L2557_RS08280;partial=true;product=vitamin B12 ABC transporter ATP-binding protein BtuD;protein_id=WP_075673354.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 750 1760 . - . ID=gene-L2557_RS08285;Name=btuC;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=L2557_RS08285 NZ_JAIKUA010000115.1 Protein Homology CDS 750 1760 . - 0 ID=cds-WP_235409988.1;Parent=gene-L2557_RS08285;Dbxref=GenBank:WP_235409988.1;Name=WP_235409988.1;Ontology_term=GO:0005524,GO:0022857;gbkey=CDS;gene=btuC;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537106.1;locus_tag=L2557_RS08285;product=vitamin B12 ABC transporter permease BtuC;protein_id=WP_235409988.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 2140 2436 . - . ID=gene-L2557_RS08290;Name=ihfA;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=L2557_RS08290 NZ_JAIKUA010000115.1 Protein Homology CDS 2140 2436 . - 0 ID=cds-WP_023582381.1;Parent=gene-L2557_RS08290;Dbxref=GenBank:WP_023582381.1;Name=WP_023582381.1;Ontology_term=GO:0006310,GO:0006355,GO:0003677;gbkey=CDS;gene=ihfA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911506.1;locus_tag=L2557_RS08290;product=integration host factor subunit alpha;protein_id=WP_023582381.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 2441 4828 . - . ID=gene-L2557_RS08295;Name=pheT;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=L2557_RS08295 NZ_JAIKUA010000115.1 Protein Homology CDS 2441 4828 . - 0 ID=cds-WP_235409989.1;Parent=gene-L2557_RS08295;Dbxref=GenBank:WP_235409989.1;Name=WP_235409989.1;Ontology_term=GO:0006432,GO:0000287,GO:0004826,GO:0005524;gbkey=CDS;gene=pheT;go_function=magnesium ion binding|0000287||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012144882.1;locus_tag=L2557_RS08295;product=phenylalanine--tRNA ligase subunit beta;protein_id=WP_235409989.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 4843 5826 . - . ID=gene-L2557_RS08300;Name=pheS;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=L2557_RS08300 NZ_JAIKUA010000115.1 Protein Homology CDS 4843 5826 . - 0 ID=cds-WP_023582383.1;Parent=gene-L2557_RS08300;Dbxref=GenBank:WP_023582383.1;Name=WP_023582383.1;Ontology_term=GO:0006432,GO:0000166,GO:0004826,GO:0005524,GO:0005737;gbkey=CDS;gene=pheS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,phenylalanine-tRNA ligase activity|0004826||IEA,ATP binding|0005524||IEA;go_process=phenylalanyl-tRNA aminoacylation|0006432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004851795.1;locus_tag=L2557_RS08300;product=phenylalanine--tRNA ligase subunit alpha;protein_id=WP_023582383.1;transl_table=11 NZ_JAIKUA010000115.1 cmsearch sequence_feature 5927 6050 . - . ID=id-NZ_JAIKUA010000115.1:5927..6050;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JAIKUA010000115.1 RefSeq gene 6002 6049 . - . ID=gene-L2557_RS17975;Name=pheM;gbkey=Gene;gene=pheM;gene_biotype=protein_coding;locus_tag=L2557_RS17975 NZ_JAIKUA010000115.1 Protein Homology CDS 6002 6049 . - 0 ID=cds-WP_120655563.1;Parent=gene-L2557_RS17975;Dbxref=GenBank:WP_120655563.1;Name=WP_120655563.1;Ontology_term=GO:0031556;gbkey=CDS;gene=pheM;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: protein motif:HMM:NF033686.1;locus_tag=L2557_RS17975;product=pheST operon leader peptide PheM;protein_id=WP_120655563.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 6157 6513 . - . ID=gene-L2557_RS08305;Name=rplT;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=L2557_RS08305 NZ_JAIKUA010000115.1 Protein Homology CDS 6157 6513 . - 0 ID=cds-WP_006537111.1;Parent=gene-L2557_RS08305;Dbxref=GenBank:WP_006537111.1;Name=WP_006537111.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rplT;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009635878.1;locus_tag=L2557_RS08305;product=50S ribosomal protein L20;protein_id=WP_006537111.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 6556 6753 . - . ID=gene-L2557_RS08310;Name=rpmI;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=L2557_RS08310 NZ_JAIKUA010000115.1 Protein Homology CDS 6556 6753 . - 0 ID=cds-WP_004263702.1;Parent=gene-L2557_RS08310;Dbxref=GenBank:WP_004263702.1;Name=WP_004263702.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006708231.1;locus_tag=L2557_RS08310;product=50S ribosomal protein L35;protein_id=WP_004263702.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 6848 7387 . - . ID=gene-L2557_RS08315;Name=infC;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=L2557_RS08315 NZ_JAIKUA010000115.1 Protein Homology CDS 6848 7387 . - 0 ID=cds-WP_036937410.1;Parent=gene-L2557_RS08315;Dbxref=GenBank:WP_036937410.1;Name=WP_036937410.1;Ontology_term=GO:0006413,GO:0003743;gbkey=CDS;gene=infC;go_function=translation initiation factor activity|0003743||IEA;go_process=translational initiation|0006413||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014499287.1;locus_tag=L2557_RS08315;product=translation initiation factor IF-3;protein_id=WP_036937410.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 7391 9319 . - . ID=gene-L2557_RS08320;Name=thrS;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=L2557_RS08320 NZ_JAIKUA010000115.1 Protein Homology CDS 7391 9319 . - 0 ID=cds-WP_075673357.1;Parent=gene-L2557_RS08320;Dbxref=GenBank:WP_075673357.1;Name=WP_075673357.1;Ontology_term=GO:0006435,GO:0004829,GO:0005524,GO:0005737;gbkey=CDS;gene=thrS;go_component=cytoplasm|0005737||IEA;go_function=threonine-tRNA ligase activity|0004829||IEA,ATP binding|0005524||IEA;go_process=threonyl-tRNA aminoacylation|0006435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227472.1;locus_tag=L2557_RS08320;product=threonine--tRNA ligase;protein_id=WP_075673357.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq pseudogene 9642 9985 . + . ID=gene-L2557_RS08325;Name=L2557_RS08325;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS08325;pseudo=true NZ_JAIKUA010000115.1 Protein Homology CDS 9642 9985 . + 0 ID=cds-L2557_RS08325;Parent=gene-L2557_RS08325;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012666440.1;locus_tag=L2557_RS08325;product=hypothetical protein;pseudo=true;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 10082 10336 . - . ID=gene-L2557_RS08330;Name=L2557_RS08330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08330 NZ_JAIKUA010000115.1 Protein Homology CDS 10082 10336 . - 0 ID=cds-WP_109418944.1;Parent=gene-L2557_RS08330;Dbxref=GenBank:WP_109418944.1;Name=WP_109418944.1;Ontology_term=GO:0030153,GO:0015643;gbkey=CDS;go_function=toxic substance binding|0015643||IEA;go_process=bacteriocin immunity|0030153||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004876984.1;locus_tag=L2557_RS08330;product=colicin E3-like toxin immunity protein;protein_id=WP_109418944.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 10378 10734 . - . ID=gene-L2557_RS08335;Name=L2557_RS08335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08335 NZ_JAIKUA010000115.1 Protein Homology CDS 10378 10734 . - 0 ID=cds-WP_157954968.1;Parent=gene-L2557_RS08335;Dbxref=GenBank:WP_157954968.1;Name=WP_157954968.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF051958.1;locus_tag=L2557_RS08335;product=phage tail fiber protein;protein_id=WP_157954968.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 10847 11242 . - . ID=gene-L2557_RS08340;Name=L2557_RS08340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08340 NZ_JAIKUA010000115.1 GeneMarkS-2+ CDS 10847 11242 . - 0 ID=cds-WP_109394242.1;Parent=gene-L2557_RS08340;Dbxref=GenBank:WP_109394242.1;Name=WP_109394242.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS08340;product=site-specific integrase;protein_id=WP_109394242.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 11947 12387 . + . ID=gene-L2557_RS08345;Name=L2557_RS08345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08345 NZ_JAIKUA010000115.1 Protein Homology CDS 11947 12387 . + 0 ID=cds-WP_075673358.1;Parent=gene-L2557_RS08345;Dbxref=GenBank:WP_075673358.1;Name=WP_075673358.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537118.1;locus_tag=L2557_RS08345;product=PACE efflux transporter;protein_id=WP_075673358.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 12392 13081 . - . ID=gene-L2557_RS08350;Name=L2557_RS08350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08350 NZ_JAIKUA010000115.1 Protein Homology CDS 12392 13081 . - 0 ID=cds-WP_075673359.1;Parent=gene-L2557_RS08350;Dbxref=GenBank:WP_075673359.1;Name=WP_075673359.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251463.1;locus_tag=L2557_RS08350;product=AraC family transcriptional regulator;protein_id=WP_075673359.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 13178 13516 . - . ID=gene-L2557_RS08355;Name=L2557_RS08355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08355 NZ_JAIKUA010000115.1 Protein Homology CDS 13178 13516 . - 0 ID=cds-WP_109418949.1;Parent=gene-L2557_RS08355;Dbxref=GenBank:WP_109418949.1;Name=WP_109418949.1;Ontology_term=GO:0000049;gbkey=CDS;go_function=tRNA binding|0000049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537121.1;locus_tag=L2557_RS08355;product=tRNA-binding protein;protein_id=WP_109418949.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 13781 14374 . + . ID=gene-L2557_RS08360;Name=L2557_RS08360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08360 NZ_JAIKUA010000115.1 Protein Homology CDS 13781 14374 . + 0 ID=cds-WP_075673361.1;Parent=gene-L2557_RS08360;Dbxref=GenBank:WP_075673361.1;Name=WP_075673361.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247938.1;locus_tag=L2557_RS08360;product=GNAT family N-acetyltransferase;protein_id=WP_075673361.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 14474 15187 . + . ID=gene-L2557_RS08365;Name=L2557_RS08365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08365 NZ_JAIKUA010000115.1 Protein Homology CDS 14474 15187 . + 0 ID=cds-WP_075673362.1;Parent=gene-L2557_RS08365;Dbxref=GenBank:WP_075673362.1;Name=WP_075673362.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242597.1;locus_tag=L2557_RS08365;product=MarC family NAAT transporter;protein_id=WP_075673362.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 15184 15855 . - . ID=gene-L2557_RS08370;Name=L2557_RS08370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08370 NZ_JAIKUA010000115.1 Protein Homology CDS 15184 15855 . - 0 ID=cds-WP_099659659.1;Parent=gene-L2557_RS08370;Dbxref=GenBank:WP_099659659.1;Name=WP_099659659.1;Ontology_term=GO:0000270,GO:0071555,GO:0008933;gbkey=CDS;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242595.1;locus_tag=L2557_RS08370;product=transglycosylase SLT domain-containing protein;protein_id=WP_099659659.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 16374 17231 . + . ID=gene-L2557_RS08375;Name=L2557_RS08375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08375 NZ_JAIKUA010000115.1 Protein Homology CDS 16374 17231 . + 0 ID=cds-WP_223672508.1;Parent=gene-L2557_RS08375;Dbxref=GenBank:WP_223672508.1;Name=WP_223672508.1;Ontology_term=GO:0030001,GO:0005524,GO:0042626,GO:0046872,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,ABC-type transporter activity|0140359||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706546.1;locus_tag=L2557_RS08375;product=metal ABC transporter substrate-binding protein;protein_id=WP_223672508.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 17228 18115 . + . ID=gene-L2557_RS08380;Name=L2557_RS08380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08380 NZ_JAIKUA010000115.1 Protein Homology CDS 17228 18115 . + 0 ID=cds-WP_075673365.1;Parent=gene-L2557_RS08380;Dbxref=GenBank:WP_075673365.1;Name=WP_075673365.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247936.1;locus_tag=L2557_RS08380;product=manganese/iron ABC transporter ATP-binding protein;protein_id=WP_075673365.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 18118 19029 . + . ID=gene-L2557_RS08385;Name=L2557_RS08385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08385 NZ_JAIKUA010000115.1 Protein Homology CDS 18118 19029 . + 0 ID=cds-WP_075673366.1;Parent=gene-L2557_RS08385;Dbxref=GenBank:WP_075673366.1;Name=WP_075673366.1;Ontology_term=GO:0030001,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242585.1;locus_tag=L2557_RS08385;product=metal ABC transporter permease;protein_id=WP_075673366.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 19026 19883 . + . ID=gene-L2557_RS08390;Name=L2557_RS08390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08390 NZ_JAIKUA010000115.1 Protein Homology CDS 19026 19883 . + 0 ID=cds-WP_075673367.1;Parent=gene-L2557_RS08390;Dbxref=GenBank:WP_075673367.1;Name=WP_075673367.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242584.1;locus_tag=L2557_RS08390;product=metal ABC transporter permease;protein_id=WP_075673367.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 20038 20910 . + . ID=gene-L2557_RS08395;Name=L2557_RS08395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08395 NZ_JAIKUA010000115.1 Protein Homology CDS 20038 20910 . + 0 ID=cds-WP_075673368.1;Parent=gene-L2557_RS08395;Dbxref=GenBank:WP_075673368.1;Name=WP_075673368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537132.1;locus_tag=L2557_RS08395;product=fructosamine kinase family protein;protein_id=WP_075673368.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 21045 21584 . - . ID=gene-L2557_RS08400;Name=L2557_RS08400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08400 NZ_JAIKUA010000115.1 Protein Homology CDS 21045 21584 . - 0 ID=cds-WP_075673369.1;Parent=gene-L2557_RS08400;Dbxref=GenBank:WP_075673369.1;Name=WP_075673369.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247934.1;locus_tag=L2557_RS08400;product=YniB family protein;protein_id=WP_075673369.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 21785 22453 . + . ID=gene-L2557_RS08405;Name=hxpB;gbkey=Gene;gene=hxpB;gene_biotype=protein_coding;locus_tag=L2557_RS08405 NZ_JAIKUA010000115.1 Protein Homology CDS 21785 22453 . + 0 ID=cds-WP_099659656.1;Parent=gene-L2557_RS08405;Dbxref=GenBank:WP_099659656.1;Name=WP_099659656.1;gbkey=CDS;gene=hxpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242581.1;locus_tag=L2557_RS08405;product=hexitol phosphatase HxpB;protein_id=WP_099659656.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 22763 23329 . + . ID=gene-L2557_RS08410;Name=L2557_RS08410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08410 NZ_JAIKUA010000115.1 Protein Homology CDS 22763 23329 . + 0 ID=cds-WP_109394232.1;Parent=gene-L2557_RS08410;Dbxref=GenBank:WP_109394232.1;Name=WP_109394232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242580.1;locus_tag=L2557_RS08410;product=metal-dependent hydrolase;protein_id=WP_109394232.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 23573 24964 . + . ID=gene-L2557_RS08415;Name=L2557_RS08415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08415 NZ_JAIKUA010000115.1 Protein Homology CDS 23573 24964 . + 0 ID=cds-WP_072062594.1;Parent=gene-L2557_RS08415;Dbxref=GenBank:WP_072062594.1;Name=WP_072062594.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242579.1;locus_tag=L2557_RS08415;product=L-cystine transporter;protein_id=WP_072062594.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 25093 25956 . + . ID=gene-L2557_RS08420;Name=L2557_RS08420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08420 NZ_JAIKUA010000115.1 Protein Homology CDS 25093 25956 . + 0 ID=cds-WP_223673672.1;Parent=gene-L2557_RS08420;Dbxref=GenBank:WP_223673672.1;Name=WP_223673672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910684.1;locus_tag=L2557_RS08420;product=hypothetical protein;protein_id=WP_223673672.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 26042 26920 . - . ID=gene-L2557_RS08425;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=L2557_RS08425 NZ_JAIKUA010000115.1 Protein Homology CDS 26042 26920 . - 0 ID=cds-WP_075673372.1;Parent=gene-L2557_RS08425;Dbxref=GenBank:WP_075673372.1;Name=WP_075673372.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=htpX;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012144856.1;locus_tag=L2557_RS08425;product=protease HtpX;protein_id=WP_075673372.1;transl_table=11 NZ_JAIKUA010000115.1 RefSeq gene 27333 28685 . - . ID=gene-L2557_RS08430;Name=L2557_RS08430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08430 NZ_JAIKUA010000115.1 Protein Homology CDS 27333 28685 . - 0 ID=cds-WP_075673373.1;Parent=gene-L2557_RS08430;Dbxref=GenBank:WP_075673373.1;Name=WP_075673373.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242576.1;locus_tag=L2557_RS08430;product=OprD family outer membrane porin;protein_id=WP_075673373.1;transl_table=11 ##sequence-region NZ_JAIKUA010000116.1 1 10031 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000116.1 RefSeq region 1 10031 . + . ID=NZ_JAIKUA010000116.1:1..10031;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000116.1 RefSeq gene 1 2177 . + . ID=gene-L2557_RS08435;Name=L2557_RS08435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08435;partial=true;start_range=.,1 NZ_JAIKUA010000116.1 Protein Homology CDS 1 2177 . + 2 ID=cds-WP_235409990.1;Parent=gene-L2557_RS08435;Dbxref=GenBank:WP_235409990.1;Name=WP_235409990.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368487.1;locus_tag=L2557_RS08435;partial=true;product=fimbria/pilus outer membrane usher protein;protein_id=WP_235409990.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000116.1 RefSeq gene 2177 2695 . + . ID=gene-L2557_RS08440;Name=L2557_RS08440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08440 NZ_JAIKUA010000116.1 Protein Homology CDS 2177 2695 . + 0 ID=cds-WP_099660502.1;Parent=gene-L2557_RS08440;Dbxref=GenBank:WP_099660502.1;Name=WP_099660502.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368488.1;locus_tag=L2557_RS08440;product=fimbrial protein;protein_id=WP_099660502.1;transl_table=11 NZ_JAIKUA010000116.1 RefSeq gene 2695 3768 . + . ID=gene-L2557_RS08445;Name=L2557_RS08445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08445 NZ_JAIKUA010000116.1 Protein Homology CDS 2695 3768 . + 0 ID=cds-WP_075673052.1;Parent=gene-L2557_RS08445;Dbxref=GenBank:WP_075673052.1;Name=WP_075673052.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249173.1;locus_tag=L2557_RS08445;product=fimbrial protein;protein_id=WP_075673052.1;transl_table=11 NZ_JAIKUA010000116.1 RefSeq gene 3794 4105 . + . ID=gene-L2557_RS08450;Name=L2557_RS08450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08450 NZ_JAIKUA010000116.1 Protein Homology CDS 3794 4105 . + 0 ID=cds-WP_075673053.1;Parent=gene-L2557_RS08450;Dbxref=GenBank:WP_075673053.1;Name=WP_075673053.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245886.1;locus_tag=L2557_RS08450;product=helix-turn-helix domain-containing protein;protein_id=WP_075673053.1;transl_table=11 NZ_JAIKUA010000116.1 RefSeq gene 4242 5285 . - . ID=gene-L2557_RS08455;Name=potD;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=L2557_RS08455 NZ_JAIKUA010000116.1 Protein Homology CDS 4242 5285 . - 0 ID=cds-WP_075673054.1;Parent=gene-L2557_RS08455;Dbxref=GenBank:WP_075673054.1;Name=WP_075673054.1;Ontology_term=GO:0015846,GO:0019808,GO:0042597;gbkey=CDS;gene=potD;go_component=periplasmic space|0042597||IEA;go_function=polyamine binding|0019808||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226306.1;locus_tag=L2557_RS08455;product=spermidine/putrescine ABC transporter substrate-binding protein PotD;protein_id=WP_075673054.1;transl_table=11 NZ_JAIKUA010000116.1 RefSeq gene 5397 6176 . - . ID=gene-L2557_RS08460;Name=potC;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=L2557_RS08460 NZ_JAIKUA010000116.1 Protein Homology CDS 5397 6176 . - 0 ID=cds-WP_075673055.1;Parent=gene-L2557_RS08460;Dbxref=GenBank:WP_075673055.1;Name=WP_075673055.1;Ontology_term=GO:0055085;gbkey=CDS;gene=potC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012987078.1;locus_tag=L2557_RS08460;product=spermidine/putrescine ABC transporter permease PotC;protein_id=WP_075673055.1;transl_table=11 NZ_JAIKUA010000116.1 RefSeq gene 6173 7033 . - . ID=gene-L2557_RS08465;Name=potB;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=L2557_RS08465 NZ_JAIKUA010000116.1 Protein Homology CDS 6173 7033 . - 0 ID=cds-WP_023583058.1;Parent=gene-L2557_RS08465;Dbxref=GenBank:WP_023583058.1;Name=WP_023583058.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=potB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226308.1;locus_tag=L2557_RS08465;product=spermidine/putrescine ABC transporter permease PotB;protein_id=WP_023583058.1;transl_table=11 NZ_JAIKUA010000116.1 RefSeq gene 7017 8132 . - . ID=gene-L2557_RS08470;Name=potA;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=L2557_RS08470 NZ_JAIKUA010000116.1 Protein Homology CDS 7017 8132 . - 0 ID=cds-WP_099660504.1;Parent=gene-L2557_RS08470;Dbxref=GenBank:WP_099660504.1;Name=WP_099660504.1;Ontology_term=GO:0015846,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=potA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=polyamine transport|0015846||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245891.1;locus_tag=L2557_RS08470;product=spermidine/putrescine ABC transporter ATP-binding protein PotA;protein_id=WP_099660504.1;transl_table=11 NZ_JAIKUA010000116.1 RefSeq gene 8677 9966 . - . ID=gene-L2557_RS08475;Name=L2557_RS08475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08475 NZ_JAIKUA010000116.1 Protein Homology CDS 8677 9966 . - 0 ID=cds-WP_235409991.1;Parent=gene-L2557_RS08475;Dbxref=GenBank:WP_235409991.1;Name=WP_235409991.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249170.1;locus_tag=L2557_RS08475;product=S8 family peptidase;protein_id=WP_235409991.1;transl_table=11 ##sequence-region NZ_JAIKUA010000117.1 1 28130 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000117.1 RefSeq region 1 28130 . + . ID=NZ_JAIKUA010000117.1:1..28130;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000117.1 RefSeq gene 19 1086 . - . ID=gene-L2557_RS08480;Name=L2557_RS08480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08480 NZ_JAIKUA010000117.1 Protein Homology CDS 19 1086 . - 0 ID=cds-WP_099659495.1;Parent=gene-L2557_RS08480;Dbxref=GenBank:WP_099659495.1;Name=WP_099659495.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249743.1;locus_tag=L2557_RS08480;product=glycosyltransferase family 9 protein;protein_id=WP_099659495.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 1088 2050 . - . ID=gene-L2557_RS08485;Name=L2557_RS08485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08485 NZ_JAIKUA010000117.1 Protein Homology CDS 1088 2050 . - 0 ID=cds-WP_099659496.1;Parent=gene-L2557_RS08485;Dbxref=GenBank:WP_099659496.1;Name=WP_099659496.1;Ontology_term=GO:0005975,GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368656.1;locus_tag=L2557_RS08485;product=polysaccharide deacetylase family protein;protein_id=WP_099659496.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 2087 3190 . - . ID=gene-L2557_RS08490;Name=L2557_RS08490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08490 NZ_JAIKUA010000117.1 Protein Homology CDS 2087 3190 . - 0 ID=cds-WP_099659497.1;Parent=gene-L2557_RS08490;Dbxref=GenBank:WP_099659497.1;Name=WP_099659497.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148909.1;locus_tag=L2557_RS08490;product=glycosyltransferase;protein_id=WP_099659497.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 3187 4317 . - . ID=gene-L2557_RS08495;Name=L2557_RS08495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08495 NZ_JAIKUA010000117.1 Protein Homology CDS 3187 4317 . - 0 ID=cds-WP_099659498.1;Parent=gene-L2557_RS08495;Dbxref=GenBank:WP_099659498.1;Name=WP_099659498.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249932.1;locus_tag=L2557_RS08495;product=glycosyltransferase family 4 protein;protein_id=WP_099659498.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 4314 5378 . - . ID=gene-L2557_RS08500;Name=rfaQ;gbkey=Gene;gene=rfaQ;gene_biotype=protein_coding;locus_tag=L2557_RS08500 NZ_JAIKUA010000117.1 Protein Homology CDS 4314 5378 . - 0 ID=cds-WP_075673243.1;Parent=gene-L2557_RS08500;Dbxref=GenBank:WP_075673243.1;Name=WP_075673243.1;Ontology_term=GO:0016757;gbkey=CDS;gene=rfaQ;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249934.1;locus_tag=L2557_RS08500;product=putative lipopolysaccharide heptosyltransferase III;protein_id=WP_075673243.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 5580 6857 . + . ID=gene-L2557_RS08505;Name=waaA;gbkey=Gene;gene=waaA;gene_biotype=protein_coding;locus_tag=L2557_RS08505 NZ_JAIKUA010000117.1 Protein Homology CDS 5580 6857 . + 0 ID=cds-WP_099659499.1;Parent=gene-L2557_RS08505;Dbxref=GenBank:WP_099659499.1;Name=WP_099659499.1;Ontology_term=GO:0016740;gbkey=CDS;gene=waaA;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013648993.1;locus_tag=L2557_RS08505;product=lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase;protein_id=WP_099659499.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 6857 7636 . + . ID=gene-L2557_RS08510;Name=L2557_RS08510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08510 NZ_JAIKUA010000117.1 Protein Homology CDS 6857 7636 . + 0 ID=cds-WP_235409992.1;Parent=gene-L2557_RS08510;Dbxref=GenBank:WP_235409992.1;Name=WP_235409992.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249750.1;locus_tag=L2557_RS08510;product=glycosyltransferase family 2 protein;protein_id=WP_235409992.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 7626 8111 . + . ID=gene-L2557_RS08515;Name=coaD;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=L2557_RS08515 NZ_JAIKUA010000117.1 Protein Homology CDS 7626 8111 . + 0 ID=cds-WP_164530235.1;Parent=gene-L2557_RS08515;Dbxref=GenBank:WP_164530235.1;Name=WP_164530235.1;Ontology_term=GO:0015937,GO:0004595;gbkey=CDS;gene=coaD;go_function=pantetheine-phosphate adenylyltransferase activity|0004595||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924268.1;locus_tag=L2557_RS08515;product=pantetheine-phosphate adenylyltransferase;protein_id=WP_164530235.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 8108 8932 . - . ID=gene-L2557_RS08520;Name=mutM;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=L2557_RS08520 NZ_JAIKUA010000117.1 Protein Homology CDS 8108 8932 . - 0 ID=cds-WP_099659502.1;Parent=gene-L2557_RS08520;Dbxref=GenBank:WP_099659502.1;Name=WP_099659502.1;Ontology_term=GO:0006281,GO:0006284,GO:0003676,GO:0003684,GO:0003906,GO:0008270,GO:0008534,GO:0016799,GO:0019104;gbkey=CDS;gene=mutM;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,DNA-(apurinic or apyrimidinic site) endonuclease activity|0003906||IEA,zinc ion binding|0008270||IEA,oxidized purine nucleobase lesion DNA N-glycosylase activity|0008534||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA,DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA,base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249751.1;locus_tag=L2557_RS08520;product=bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase;protein_id=WP_099659502.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 9032 10285 . + . ID=gene-L2557_RS08525;Name=rfaL;gbkey=Gene;gene=rfaL;gene_biotype=protein_coding;locus_tag=L2557_RS08525 NZ_JAIKUA010000117.1 Protein Homology CDS 9032 10285 . + 0 ID=cds-WP_099659503.1;Parent=gene-L2557_RS08525;Dbxref=GenBank:WP_099659503.1;Name=WP_099659503.1;gbkey=CDS;gene=rfaL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628710.1;locus_tag=L2557_RS08525;product=O-antigen ligase RfaL;protein_id=WP_099659503.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 10290 11459 . - . ID=gene-L2557_RS08530;Name=L2557_RS08530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08530 NZ_JAIKUA010000117.1 Protein Homology CDS 10290 11459 . - 0 ID=cds-WP_099659564.1;Parent=gene-L2557_RS08530;Dbxref=GenBank:WP_099659564.1;Name=WP_099659564.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455747.1;locus_tag=L2557_RS08530;product=glycosyltransferase family 4 protein;protein_id=WP_099659564.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 11459 12562 . - . ID=gene-L2557_RS08535;Name=L2557_RS08535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08535 NZ_JAIKUA010000117.1 Protein Homology CDS 11459 12562 . - 0 ID=cds-WP_099659504.1;Parent=gene-L2557_RS08535;Dbxref=GenBank:WP_099659504.1;Name=WP_099659504.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847626.1;locus_tag=L2557_RS08535;product=glycosyltransferase family 4 protein;protein_id=WP_099659504.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 12566 13567 . - . ID=gene-L2557_RS08540;Name=L2557_RS08540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08540 NZ_JAIKUA010000117.1 Protein Homology CDS 12566 13567 . - 0 ID=cds-WP_099659505.1;Parent=gene-L2557_RS08540;Dbxref=GenBank:WP_099659505.1;Name=WP_099659505.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628712.1;locus_tag=L2557_RS08540;product=glycosyltransferase family 9 protein;protein_id=WP_099659505.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 13706 14833 . - . ID=gene-L2557_RS08545;Name=L2557_RS08545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08545 NZ_JAIKUA010000117.1 Protein Homology CDS 13706 14833 . - 0 ID=cds-WP_156732943.1;Parent=gene-L2557_RS08545;Dbxref=GenBank:WP_156732943.1;Name=WP_156732943.1;Ontology_term=GO:0009101,GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246481.1;locus_tag=L2557_RS08545;product=glycosyltransferase family 4 protein;protein_id=WP_156732943.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 14983 15150 . - . ID=gene-L2557_RS08550;Name=rpmG;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=L2557_RS08550 NZ_JAIKUA010000117.1 Protein Homology CDS 14983 15150 . - 0 ID=cds-WP_006534250.1;Parent=gene-L2557_RS08550;Dbxref=GenBank:WP_006534250.1;Name=WP_006534250.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmG;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847629.1;locus_tag=L2557_RS08550;product=50S ribosomal protein L33;protein_id=WP_006534250.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 15162 15398 . - . ID=gene-L2557_RS08555;Name=rpmB;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=L2557_RS08555 NZ_JAIKUA010000117.1 Protein Homology CDS 15162 15398 . - 0 ID=cds-WP_036914542.1;Parent=gene-L2557_RS08555;Dbxref=GenBank:WP_036914542.1;Name=WP_036914542.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmB;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008457442.1;locus_tag=L2557_RS08555;product=50S ribosomal protein L28;protein_id=WP_036914542.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 15646 16317 . - . ID=gene-L2557_RS08560;Name=radC;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=L2557_RS08560 NZ_JAIKUA010000117.1 Protein Homology CDS 15646 16317 . - 0 ID=cds-WP_075673253.1;Parent=gene-L2557_RS08560;Dbxref=GenBank:WP_075673253.1;Name=WP_075673253.1;gbkey=CDS;gene=radC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660584.1;locus_tag=L2557_RS08560;product=RadC family protein;protein_id=WP_075673253.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 16620 17831 . + . ID=gene-L2557_RS08565;Name=coaBC;gbkey=Gene;gene=coaBC;gene_biotype=protein_coding;locus_tag=L2557_RS08565 NZ_JAIKUA010000117.1 Protein Homology CDS 16620 17831 . + 0 ID=cds-WP_235409993.1;Parent=gene-L2557_RS08565;Dbxref=GenBank:WP_235409993.1;Name=WP_235409993.1;Ontology_term=GO:0015937,GO:0015941,GO:0004632,GO:0004633,GO:0010181;gbkey=CDS;gene=coaBC;go_function=phosphopantothenate--cysteine ligase activity|0004632||IEA,phosphopantothenoylcysteine decarboxylase activity|0004633||IEA,FMN binding|0010181||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA,pantothenate catabolic process|0015941||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249943.1;locus_tag=L2557_RS08565;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC;protein_id=WP_235409993.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 17815 18273 . + . ID=gene-L2557_RS08570;Name=dut;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=L2557_RS08570 NZ_JAIKUA010000117.1 Protein Homology CDS 17815 18273 . + 0 ID=cds-WP_099659508.1;Parent=gene-L2557_RS08570;Dbxref=GenBank:WP_099659508.1;Name=WP_099659508.1;Ontology_term=GO:0006226,GO:0046081,GO:0000287,GO:0004170;gbkey=CDS;gene=dut;go_function=magnesium ion binding|0000287||IEA,dUTP diphosphatase activity|0004170||IEA;go_process=dUMP biosynthetic process|0006226||IEA,dUTP catabolic process|0046081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000976070.1;locus_tag=L2557_RS08570;product=dUTP diphosphatase;protein_id=WP_099659508.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 18387 18989 . + . ID=gene-L2557_RS08575;Name=slmA;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;locus_tag=L2557_RS08575 NZ_JAIKUA010000117.1 Protein Homology CDS 18387 18989 . + 0 ID=cds-WP_075673256.1;Parent=gene-L2557_RS08575;Dbxref=GenBank:WP_075673256.1;Name=WP_075673256.1;Ontology_term=GO:0010974,GO:0003677;gbkey=CDS;gene=slmA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of division septum assembly|0010974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246491.1;locus_tag=L2557_RS08575;product=nucleoid occlusion factor SlmA;protein_id=WP_075673256.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 19298 19942 . - . ID=gene-L2557_RS08580;Name=pyrE;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=L2557_RS08580 NZ_JAIKUA010000117.1 Protein Homology CDS 19298 19942 . - 0 ID=cds-WP_075673257.1;Parent=gene-L2557_RS08580;Dbxref=GenBank:WP_075673257.1;Name=WP_075673257.1;Ontology_term=GO:0009220,GO:0004588;gbkey=CDS;gene=pyrE;go_function=orotate phosphoribosyltransferase activity|0004588||IEA;go_process=pyrimidine ribonucleotide biosynthetic process|0009220||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246493.1;locus_tag=L2557_RS08580;product=orotate phosphoribosyltransferase;protein_id=WP_075673257.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 20023 20739 . - . ID=gene-L2557_RS08585;Name=rph;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=L2557_RS08585 NZ_JAIKUA010000117.1 Protein Homology CDS 20023 20739 . - 0 ID=cds-WP_069366895.1;Parent=gene-L2557_RS08585;Dbxref=GenBank:WP_069366895.1;Name=WP_069366895.1;Ontology_term=GO:0008033,GO:0000049,GO:0009022;gbkey=CDS;gene=rph;go_function=tRNA binding|0000049||IEA,tRNA nucleotidyltransferase activity|0009022||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249760.1;locus_tag=L2557_RS08585;product=ribonuclease PH;protein_id=WP_069366895.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 20865 21728 . + . ID=gene-L2557_RS08590;Name=L2557_RS08590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08590 NZ_JAIKUA010000117.1 Protein Homology CDS 20865 21728 . + 0 ID=cds-WP_099659509.1;Parent=gene-L2557_RS08590;Dbxref=GenBank:WP_099659509.1;Name=WP_099659509.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312546.1;locus_tag=L2557_RS08590;product=YicC/YloC family endoribonuclease;protein_id=WP_099659509.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 21845 22744 . - . ID=gene-L2557_RS08595;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=L2557_RS08595 NZ_JAIKUA010000117.1 Protein Homology CDS 21845 22744 . - 0 ID=cds-WP_075673260.1;Parent=gene-L2557_RS08595;Dbxref=GenBank:WP_075673260.1;Name=WP_075673260.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249764.1;locus_tag=L2557_RS08595;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_075673260.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 22853 23590 . + . ID=gene-L2557_RS08600;Name=L2557_RS08600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08600 NZ_JAIKUA010000117.1 Protein Homology CDS 22853 23590 . + 0 ID=cds-WP_075673261.1;Parent=gene-L2557_RS08600;Dbxref=GenBank:WP_075673261.1;Name=WP_075673261.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249950.1;locus_tag=L2557_RS08600;product=tetratricopeptide repeat protein;protein_id=WP_075673261.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 23681 24139 . - . ID=gene-L2557_RS08605;Name=L2557_RS08605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08605 NZ_JAIKUA010000117.1 Protein Homology CDS 23681 24139 . - 0 ID=cds-WP_159242248.1;Parent=gene-L2557_RS08605;Dbxref=GenBank:WP_159242248.1;Name=WP_159242248.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123001.1;locus_tag=L2557_RS08605;product=GNAT family N-acetyltransferase;protein_id=WP_159242248.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 24267 25754 . + . ID=gene-L2557_RS08610;Name=pdxR;gbkey=Gene;gene=pdxR;gene_biotype=protein_coding;locus_tag=L2557_RS08610 NZ_JAIKUA010000117.1 Protein Homology CDS 24267 25754 . + 0 ID=cds-WP_159242247.1;Parent=gene-L2557_RS08610;Dbxref=GenBank:WP_159242247.1;Name=WP_159242247.1;Ontology_term=GO:0042823,GO:2000142,GO:0070279;gbkey=CDS;gene=pdxR;go_function=vitamin B6 binding|0070279||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249767.1;locus_tag=L2557_RS08610;product=MocR-like pyridoxine biosynthesis transcription factor PdxR;protein_id=WP_159242247.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 25810 26379 . - . ID=gene-L2557_RS08615;Name=L2557_RS08615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08615 NZ_JAIKUA010000117.1 Protein Homology CDS 25810 26379 . - 0 ID=cds-WP_075673264.1;Parent=gene-L2557_RS08615;Dbxref=GenBank:WP_075673264.1;Name=WP_075673264.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249768.1;locus_tag=L2557_RS08615;product=class I SAM-dependent methyltransferase;protein_id=WP_075673264.1;transl_table=11 NZ_JAIKUA010000117.1 RefSeq gene 26852 27958 . + . ID=gene-L2557_RS08620;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=L2557_RS08620 NZ_JAIKUA010000117.1 Protein Homology CDS 26852 27958 . + 0 ID=cds-WP_088494138.1;Parent=gene-L2557_RS08620;Dbxref=GenBank:WP_088494138.1;Name=WP_088494138.1;Ontology_term=GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0004073,GO:0050661;gbkey=CDS;gene=asd;go_function=aspartate-semialdehyde dehydrogenase activity|0004073||IEA,NADP binding|0050661||IEA;go_process=methionine biosynthetic process|0009086||IEA,threonine biosynthetic process|0009088||IEA,lysine biosynthetic process via diaminopimelate|0009089||IEA,isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013183030.1;locus_tag=L2557_RS08620;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_088494138.1;transl_table=11 ##sequence-region NZ_JAIKUA010000118.1 1 18342 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000118.1 RefSeq region 1 18342 . + . ID=NZ_JAIKUA010000118.1:1..18342;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000118.1 RefSeq gene 247 870 . + . ID=gene-L2557_RS08625;Name=L2557_RS08625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08625 NZ_JAIKUA010000118.1 Protein Homology CDS 247 870 . + 0 ID=cds-WP_075671862.1;Parent=gene-L2557_RS08625;Dbxref=GenBank:WP_075671862.1;Name=WP_075671862.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248273.1;locus_tag=L2557_RS08625;product=response regulator;protein_id=WP_075671862.1;transl_table=11 NZ_JAIKUA010000118.1 RefSeq gene 950 1510 . - . ID=gene-L2557_RS08630;Name=L2557_RS08630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08630 NZ_JAIKUA010000118.1 Protein Homology CDS 950 1510 . - 0 ID=cds-WP_075671863.1;Parent=gene-L2557_RS08630;Dbxref=GenBank:WP_075671863.1;Name=WP_075671863.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533023.1;locus_tag=L2557_RS08630;product=hypothetical protein;protein_id=WP_075671863.1;transl_table=11 NZ_JAIKUA010000118.1 RefSeq gene 1717 2088 . + . ID=gene-L2557_RS08635;Name=L2557_RS08635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08635 NZ_JAIKUA010000118.1 Protein Homology CDS 1717 2088 . + 0 ID=cds-WP_075671864.1;Parent=gene-L2557_RS08635;Dbxref=GenBank:WP_075671864.1;Name=WP_075671864.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248275.1;locus_tag=L2557_RS08635;product=ArsC family reductase;protein_id=WP_075671864.1;transl_table=11 NZ_JAIKUA010000118.1 RefSeq gene 2094 3224 . + . ID=gene-L2557_RS08640;Name=dapE;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=L2557_RS08640 NZ_JAIKUA010000118.1 Protein Homology CDS 2094 3224 . + 0 ID=cds-WP_075671865.1;Parent=gene-L2557_RS08640;Dbxref=GenBank:WP_075671865.1;Name=WP_075671865.1;Ontology_term=GO:0009089,GO:0009014;gbkey=CDS;gene=dapE;go_function=succinyl-diaminopimelate desuccinylase activity|0009014||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368032.1;locus_tag=L2557_RS08640;product=succinyl-diaminopimelate desuccinylase;protein_id=WP_075671865.1;transl_table=11 NZ_JAIKUA010000118.1 RefSeq gene 3221 3889 . + . ID=gene-L2557_RS08645;Name=L2557_RS08645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08645 NZ_JAIKUA010000118.1 Protein Homology CDS 3221 3889 . + 0 ID=cds-WP_075671866.1;Parent=gene-L2557_RS08645;Dbxref=GenBank:WP_075671866.1;Name=WP_075671866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628039.1;locus_tag=L2557_RS08645;product=M15 family metallopeptidase;protein_id=WP_075671866.1;transl_table=11 NZ_JAIKUA010000118.1 RefSeq gene 3892 4275 . - . ID=gene-L2557_RS08650;Name=L2557_RS08650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08650 NZ_JAIKUA010000118.1 Protein Homology CDS 3892 4275 . - 0 ID=cds-WP_211838402.1;Parent=gene-L2557_RS08650;Dbxref=GenBank:WP_211838402.1;Name=WP_211838402.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533028.1;locus_tag=L2557_RS08650;product=DUF454 family protein;protein_id=WP_211838402.1;transl_table=11 NZ_JAIKUA010000118.1 RefSeq gene 4374 4583 . + . ID=gene-L2557_RS08655;Name=L2557_RS08655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08655 NZ_JAIKUA010000118.1 Protein Homology CDS 4374 4583 . + 0 ID=cds-WP_235409994.1;Parent=gene-L2557_RS08655;Dbxref=GenBank:WP_235409994.1;Name=WP_235409994.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243408.1;locus_tag=L2557_RS08655;product=YpfN family protein;protein_id=WP_235409994.1;transl_table=11 NZ_JAIKUA010000118.1 RefSeq gene 4546 6594 . - . ID=gene-L2557_RS08660;Name=L2557_RS08660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08660 NZ_JAIKUA010000118.1 Protein Homology CDS 4546 6594 . - 0 ID=cds-WP_235409995.1;Parent=gene-L2557_RS08660;Dbxref=GenBank:WP_235409995.1;Name=WP_235409995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533029.1;locus_tag=L2557_RS08660;product=tRNA(Met) cytidine acetyltransferase TmcA;protein_id=WP_235409995.1;transl_table=11 NZ_JAIKUA010000118.1 RefSeq gene 6597 7049 . - . ID=gene-L2557_RS08665;Name=L2557_RS08665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08665 NZ_JAIKUA010000118.1 Protein Homology CDS 6597 7049 . - 0 ID=cds-WP_006533030.1;Parent=gene-L2557_RS08665;Dbxref=GenBank:WP_006533030.1;Name=WP_006533030.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533030.1;locus_tag=L2557_RS08665;product=DUF441 domain-containing protein;protein_id=WP_006533030.1;transl_table=11 NZ_JAIKUA010000118.1 RefSeq gene 7111 7995 . - . ID=gene-L2557_RS08670;Name=ypfJ;gbkey=Gene;gene=ypfJ;gene_biotype=protein_coding;locus_tag=L2557_RS08670 NZ_JAIKUA010000118.1 Protein Homology CDS 7111 7995 . - 0 ID=cds-WP_075671874.1;Parent=gene-L2557_RS08670;Dbxref=GenBank:WP_075671874.1;Name=WP_075671874.1;gbkey=CDS;gene=ypfJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533031.1;locus_tag=L2557_RS08670;product=KPN_02809 family neutral zinc metallopeptidase;protein_id=WP_075671874.1;transl_table=11 NZ_JAIKUA010000118.1 RefSeq gene 8220 8918 . + . ID=gene-L2557_RS08675;Name=L2557_RS08675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08675 NZ_JAIKUA010000118.1 Protein Homology CDS 8220 8918 . + 0 ID=cds-WP_075671876.1;Parent=gene-L2557_RS08675;Dbxref=GenBank:WP_075671876.1;Name=WP_075671876.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533032.1;locus_tag=L2557_RS08675;product=helix-turn-helix transcriptional regulator;protein_id=WP_075671876.1;transl_table=11 NZ_JAIKUA010000118.1 RefSeq gene 9011 9622 . + . ID=gene-L2557_RS08680;Name=L2557_RS08680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08680 NZ_JAIKUA010000118.1 Protein Homology CDS 9011 9622 . + 0 ID=cds-WP_075671878.1;Parent=gene-L2557_RS08680;Dbxref=GenBank:WP_075671878.1;Name=WP_075671878.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913791.1;locus_tag=L2557_RS08680;product=glutathione S-transferase family protein;protein_id=WP_075671878.1;transl_table=11 NZ_JAIKUA010000118.1 RefSeq gene 9779 10492 . - . ID=gene-L2557_RS08685;Name=purC;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=L2557_RS08685 NZ_JAIKUA010000118.1 Protein Homology CDS 9779 10492 . - 0 ID=cds-WP_109418873.1;Parent=gene-L2557_RS08685;Dbxref=GenBank:WP_109418873.1;Name=WP_109418873.1;Ontology_term=GO:0006164,GO:0004639;gbkey=CDS;gene=purC;go_function=phosphoribosylaminoimidazolesuccinocarboxamide synthase activity|0004639||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458944.1;locus_tag=L2557_RS08685;product=phosphoribosylaminoimidazolesuccinocarboxamide synthase;protein_id=WP_109418873.1;transl_table=11 NZ_JAIKUA010000118.1 RefSeq gene 11015 11605 . - . ID=gene-L2557_RS08690;Name=L2557_RS08690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08690 NZ_JAIKUA010000118.1 Protein Homology CDS 11015 11605 . - 0 ID=cds-WP_075671882.1;Parent=gene-L2557_RS08690;Dbxref=GenBank:WP_075671882.1;Name=WP_075671882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533036.1;locus_tag=L2557_RS08690;product=phosphatase PAP2 family protein;protein_id=WP_075671882.1;transl_table=11 NZ_JAIKUA010000118.1 RefSeq gene 11893 12939 . - . ID=gene-L2557_RS08695;Name=bamC;gbkey=Gene;gene=bamC;gene_biotype=protein_coding;locus_tag=L2557_RS08695 NZ_JAIKUA010000118.1 Protein Homology CDS 11893 12939 . - 0 ID=cds-WP_075671884.1;Parent=gene-L2557_RS08695;Dbxref=GenBank:WP_075671884.1;Name=WP_075671884.1;gbkey=CDS;gene=bamC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243414.1;locus_tag=L2557_RS08695;product=outer membrane protein assembly factor BamC;protein_id=WP_075671884.1;transl_table=11 NZ_JAIKUA010000118.1 RefSeq gene 12956 13855 . - . ID=gene-L2557_RS08700;Name=dapA;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=L2557_RS08700 NZ_JAIKUA010000118.1 Protein Homology CDS 12956 13855 . - 0 ID=cds-WP_023581903.1;Parent=gene-L2557_RS08700;Dbxref=GenBank:WP_023581903.1;Name=WP_023581903.1;Ontology_term=GO:0009089,GO:0008840;gbkey=CDS;gene=dapA;go_function=4-hydroxy-tetrahydrodipicolinate synthase activity|0008840||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243415.1;locus_tag=L2557_RS08700;product=4-hydroxy-tetrahydrodipicolinate synthase;protein_id=WP_023581903.1;transl_table=11 NZ_JAIKUA010000118.1 RefSeq gene 14071 14628 . + . ID=gene-L2557_RS08705;Name=L2557_RS08705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08705 NZ_JAIKUA010000118.1 Protein Homology CDS 14071 14628 . + 0 ID=cds-WP_036912784.1;Parent=gene-L2557_RS08705;Dbxref=GenBank:WP_036912784.1;Name=WP_036912784.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248283.1;locus_tag=L2557_RS08705;product=glycine cleavage system transcriptional repressor;protein_id=WP_036912784.1;transl_table=11 NZ_JAIKUA010000118.1 RefSeq gene 14646 15116 . + . ID=gene-L2557_RS08710;Name=bcp;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=L2557_RS08710 NZ_JAIKUA010000118.1 Protein Homology CDS 14646 15116 . + 0 ID=cds-WP_075671886.1;Parent=gene-L2557_RS08710;Dbxref=GenBank:WP_075671886.1;Name=WP_075671886.1;Ontology_term=GO:0016209,GO:0016491;gbkey=CDS;gene=bcp;go_function=antioxidant activity|0016209||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243417.1;locus_tag=L2557_RS08710;product=thioredoxin-dependent thiol peroxidase;protein_id=WP_075671886.1;transl_table=11 NZ_JAIKUA010000118.1 RefSeq gene 15202 16278 . - . ID=gene-L2557_RS08715;Name=L2557_RS08715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08715 NZ_JAIKUA010000118.1 Protein Homology CDS 15202 16278 . - 0 ID=cds-WP_075671888.1;Parent=gene-L2557_RS08715;Dbxref=GenBank:WP_075671888.1;Name=WP_075671888.1;Ontology_term=GO:0055085,GO:1905887,GO:0015562;gbkey=CDS;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA,autoinducer AI-2 transmembrane transport|1905887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920629.1;locus_tag=L2557_RS08715;product=AI-2E family transporter;protein_id=WP_075671888.1;transl_table=11 NZ_JAIKUA010000118.1 RefSeq gene 16433 17905 . + . ID=gene-L2557_RS08720;Name=bepA;gbkey=Gene;gene=bepA;gene_biotype=protein_coding;locus_tag=L2557_RS08720 NZ_JAIKUA010000118.1 Protein Homology CDS 16433 17905 . + 0 ID=cds-WP_075671890.1;Parent=gene-L2557_RS08720;Dbxref=GenBank:WP_075671890.1;Name=WP_075671890.1;gbkey=CDS;gene=bepA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243422.1;locus_tag=L2557_RS08720;product=beta-barrel assembly-enhancing protease;protein_id=WP_075671890.1;transl_table=11 NZ_JAIKUA010000118.1 RefSeq gene 17914 18270 . + . ID=gene-L2557_RS08725;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=L2557_RS08725 NZ_JAIKUA010000118.1 Protein Homology CDS 17914 18270 . + 0 ID=cds-WP_075671892.1;Parent=gene-L2557_RS08725;Dbxref=GenBank:WP_075671892.1;Name=WP_075671892.1;Note=This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite%2C after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell%2C providing resistance.;Ontology_term=GO:0046685,GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368035.1;locus_tag=L2557_RS08725;product=arsenate reductase (glutaredoxin);protein_id=WP_075671892.1;transl_table=11 ##sequence-region NZ_JAIKUA010000119.1 1 15098 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000119.1 RefSeq region 1 15098 . + . ID=NZ_JAIKUA010000119.1:1..15098;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000119.1 RefSeq gene 1 1153 . + . ID=gene-L2557_RS08730;Name=aceF;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=L2557_RS08730;partial=true;start_range=.,1 NZ_JAIKUA010000119.1 Protein Homology CDS 1 1153 . + 1 ID=cds-WP_235409996.1;Parent=gene-L2557_RS08730;Dbxref=GenBank:WP_235409996.1;Name=WP_235409996.1;Ontology_term=GO:0006096,GO:0004742,GO:0045254;gbkey=CDS;gene=aceF;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=dihydrolipoyllysine-residue acetyltransferase activity|0004742||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248545.1;locus_tag=L2557_RS08730;partial=true;product=dihydrolipoyllysine-residue acetyltransferase;protein_id=WP_235409996.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000119.1 RefSeq gene 1354 2781 . + . ID=gene-L2557_RS08735;Name=lpdA;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=L2557_RS08735 NZ_JAIKUA010000119.1 Protein Homology CDS 1354 2781 . + 0 ID=cds-WP_075670832.1;Parent=gene-L2557_RS08735;Dbxref=GenBank:WP_075670832.1;Name=WP_075670832.1;Ontology_term=GO:0004148,GO:0050660;gbkey=CDS;gene=lpdA;go_function=dihydrolipoyl dehydrogenase (NADH) activity|0004148||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910376.1;locus_tag=L2557_RS08735;product=dihydrolipoyl dehydrogenase;protein_id=WP_075670832.1;transl_table=11 NZ_JAIKUA010000119.1 RefSeq gene 3017 3481 . + . ID=gene-L2557_RS08740;Name=L2557_RS08740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08740 NZ_JAIKUA010000119.1 Protein Homology CDS 3017 3481 . + 0 ID=cds-WP_099659321.1;Parent=gene-L2557_RS08740;Dbxref=GenBank:WP_099659321.1;Name=WP_099659321.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005184857.1;locus_tag=L2557_RS08740;product=anti-virulence regulator CigR family protein;protein_id=WP_099659321.1;transl_table=11 NZ_JAIKUA010000119.1 RefSeq gene 3957 6554 . + . ID=gene-L2557_RS08745;Name=acnB;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=L2557_RS08745 NZ_JAIKUA010000119.1 Protein Homology CDS 3957 6554 . + 0 ID=cds-WP_075670836.1;Parent=gene-L2557_RS08745;Dbxref=GenBank:WP_075670836.1;Name=WP_075670836.1;Ontology_term=GO:0006099,GO:0003994,GO:0051539,GO:0005829;gbkey=CDS;gene=acnB;go_component=cytosol|0005829||IEA;go_function=aconitate hydratase activity|0003994||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080489.1;locus_tag=L2557_RS08745;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=WP_075670836.1;transl_table=11 NZ_JAIKUA010000119.1 RefSeq gene 6691 7062 . + . ID=gene-L2557_RS08750;Name=L2557_RS08750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08750 NZ_JAIKUA010000119.1 Protein Homology CDS 6691 7062 . + 0 ID=cds-WP_023581519.1;Parent=gene-L2557_RS08750;Dbxref=GenBank:WP_023581519.1;Name=WP_023581519.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244066.1;locus_tag=L2557_RS08750;product=YacL family protein;protein_id=WP_023581519.1;transl_table=11 NZ_JAIKUA010000119.1 RefSeq gene 7155 8015 . + . ID=gene-L2557_RS08755;Name=mscS;gbkey=Gene;gene=mscS;gene_biotype=protein_coding;locus_tag=L2557_RS08755 NZ_JAIKUA010000119.1 Protein Homology CDS 7155 8015 . + 0 ID=cds-WP_075670838.1;Parent=gene-L2557_RS08755;Dbxref=GenBank:WP_075670838.1;Name=WP_075670838.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248539.1;locus_tag=L2557_RS08755;product=small-conductance mechanosensitive channel MscS;protein_id=WP_075670838.1;transl_table=11 NZ_JAIKUA010000119.1 RefSeq gene 8492 9115 . + . ID=gene-L2557_RS08760;Name=argO;gbkey=Gene;gene=argO;gene_biotype=protein_coding;locus_tag=L2557_RS08760 NZ_JAIKUA010000119.1 Protein Homology CDS 8492 9115 . + 0 ID=cds-WP_223673482.1;Parent=gene-L2557_RS08760;Dbxref=GenBank:WP_223673482.1;Name=WP_223673482.1;Ontology_term=GO:1903826,GO:0061459,GO:0016020;gbkey=CDS;gene=argO;go_component=membrane|0016020||IEA;go_function=L-arginine transmembrane transporter activity|0061459||IEA;go_process=L-arginine transmembrane transport|1903826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244063.1;locus_tag=L2557_RS08760;product=arginine exporter ArgO;protein_id=WP_223673482.1;transl_table=11 NZ_JAIKUA010000119.1 RefSeq gene 9200 9934 . + . ID=gene-L2557_RS08765;Name=L2557_RS08765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08765 NZ_JAIKUA010000119.1 Protein Homology CDS 9200 9934 . + 0 ID=cds-WP_075670942.1;Parent=gene-L2557_RS08765;Dbxref=GenBank:WP_075670942.1;Name=WP_075670942.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248538.1;locus_tag=L2557_RS08765;product=oxidative stress defense protein;protein_id=WP_075670942.1;transl_table=11 NZ_JAIKUA010000119.1 RefSeq gene 10007 10906 . - . ID=gene-L2557_RS08770;Name=L2557_RS08770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08770 NZ_JAIKUA010000119.1 Protein Homology CDS 10007 10906 . - 0 ID=cds-WP_069367724.1;Parent=gene-L2557_RS08770;Dbxref=GenBank:WP_069367724.1;Name=WP_069367724.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244059.1;locus_tag=L2557_RS08770;product=LysR family transcriptional regulator ArgP;protein_id=WP_069367724.1;transl_table=11 NZ_JAIKUA010000119.1 RefSeq gene 11068 11724 . + . ID=gene-L2557_RS08775;Name=rpiA;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=L2557_RS08775 NZ_JAIKUA010000119.1 Protein Homology CDS 11068 11724 . + 0 ID=cds-WP_072069239.1;Parent=gene-L2557_RS08775;Dbxref=GenBank:WP_072069239.1;Name=WP_072069239.1;Ontology_term=GO:0009052,GO:0004751;gbkey=CDS;gene=rpiA;go_function=ribose-5-phosphate isomerase activity|0004751||IEA;go_process=pentose-phosphate shunt%2C non-oxidative branch|0009052||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244058.1;locus_tag=L2557_RS08775;product=ribose-5-phosphate isomerase RpiA;protein_id=WP_072069239.1;transl_table=11 NZ_JAIKUA010000119.1 RefSeq gene 11996 13246 . + . ID=gene-L2557_RS08780;Name=serA;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=L2557_RS08780 NZ_JAIKUA010000119.1 Protein Homology CDS 11996 13246 . + 0 ID=cds-WP_075670842.1;Parent=gene-L2557_RS08780;Dbxref=GenBank:WP_075670842.1;Name=WP_075670842.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=serA;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311811.1;locus_tag=L2557_RS08780;product=phosphoglycerate dehydrogenase;protein_id=WP_075670842.1;transl_table=11 NZ_JAIKUA010000119.1 RefSeq gene 13319 15098 . - . ID=gene-L2557_RS08785;Name=L2557_RS08785;end_range=15098,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08785;partial=true NZ_JAIKUA010000119.1 Protein Homology CDS 13319 15098 . - 1 ID=cds-WP_235409997.1;Parent=gene-L2557_RS08785;Dbxref=GenBank:WP_235409997.1;Name=WP_235409997.1;Ontology_term=GO:0030253,GO:0005524,GO:0016020,GO:0030256;end_range=15098,.;gbkey=CDS;go_component=membrane|0016020||IEA,type I protein secretion system complex|0030256||IEA;go_function=ATP binding|0005524||IEA;go_process=protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368222.1;locus_tag=L2557_RS08785;partial=true;product=type I secretion system permease/ATPase;protein_id=WP_235409997.1;transl_table=11 ##sequence-region NZ_JAIKUA010000012.1 1 10127 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000012.1 RefSeq region 1 10127 . + . ID=NZ_JAIKUA010000012.1:1..10127;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000012.1 RefSeq gene 225 1469 . - . ID=gene-L2557_RS01005;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=L2557_RS01005 NZ_JAIKUA010000012.1 Protein Homology CDS 225 1469 . - 0 ID=cds-WP_075673199.1;Parent=gene-L2557_RS01005;Dbxref=GenBank:WP_075673199.1;Name=WP_075673199.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247111.1;locus_tag=L2557_RS01005;product=peptidase T;protein_id=WP_075673199.1;transl_table=11 NZ_JAIKUA010000012.1 RefSeq gene 1522 2379 . - . ID=gene-L2557_RS01010;Name=cobB;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=L2557_RS01010 NZ_JAIKUA010000012.1 Protein Homology CDS 1522 2379 . - 0 ID=cds-WP_075673198.1;Parent=gene-L2557_RS01010;Dbxref=GenBank:WP_075673198.1;Name=WP_075673198.1;Ontology_term=GO:0070403;gbkey=CDS;gene=cobB;go_function=NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247834.1;locus_tag=L2557_RS01010;product=Sir2 family NAD+-dependent deacetylase;protein_id=WP_075673198.1;transl_table=11 NZ_JAIKUA010000012.1 RefSeq gene 2465 3712 . - . ID=gene-L2557_RS01015;Name=lolE;gbkey=Gene;gene=lolE;gene_biotype=protein_coding;locus_tag=L2557_RS01015 NZ_JAIKUA010000012.1 Protein Homology CDS 2465 3712 . - 0 ID=cds-WP_075673197.1;Parent=gene-L2557_RS01015;Dbxref=GenBank:WP_075673197.1;Name=WP_075673197.1;Ontology_term=GO:0042953;gbkey=CDS;gene=lolE;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537224.1;locus_tag=L2557_RS01015;product=lipoprotein-releasing ABC transporter permease subunit LolE;protein_id=WP_075673197.1;transl_table=11 NZ_JAIKUA010000012.1 RefSeq gene 3712 4422 . - . ID=gene-L2557_RS01020;Name=lolD;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=L2557_RS01020 NZ_JAIKUA010000012.1 Protein Homology CDS 3712 4422 . - 0 ID=cds-WP_229578446.1;Parent=gene-L2557_RS01020;Dbxref=GenBank:WP_229578446.1;Name=WP_229578446.1;Ontology_term=GO:0042953,GO:0005524,GO:0016020;gbkey=CDS;gene=lolD;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013576226.1;locus_tag=L2557_RS01020;product=lipoprotein-releasing ABC transporter ATP-binding protein LolD;protein_id=WP_229578446.1;transl_table=11 NZ_JAIKUA010000012.1 RefSeq gene 4463 5665 . - . ID=gene-L2557_RS01025;Name=lolC;gbkey=Gene;gene=lolC;gene_biotype=protein_coding;locus_tag=L2557_RS01025 NZ_JAIKUA010000012.1 Protein Homology CDS 4463 5665 . - 0 ID=cds-WP_075673196.1;Parent=gene-L2557_RS01025;Dbxref=GenBank:WP_075673196.1;Name=WP_075673196.1;Ontology_term=GO:0042953,GO:0016020;gbkey=CDS;gene=lolC;go_component=membrane|0016020||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006118853.1;locus_tag=L2557_RS01025;product=lipoprotein-releasing ABC transporter permease subunit LolC;protein_id=WP_075673196.1;transl_table=11 NZ_JAIKUA010000012.1 RefSeq gene 5859 9308 . + . ID=gene-L2557_RS01030;Name=mfd;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=L2557_RS01030 NZ_JAIKUA010000012.1 Protein Homology CDS 5859 9308 . + 0 ID=cds-WP_099659583.1;Parent=gene-L2557_RS01030;Dbxref=GenBank:WP_099659583.1;Name=WP_099659583.1;Ontology_term=GO:0006281,GO:0003676,GO:0003684,GO:0005524;gbkey=CDS;gene=mfd;go_function=nucleic acid binding|0003676||IEA,damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184602.1;locus_tag=L2557_RS01030;product=transcription-repair coupling factor;protein_id=WP_099659583.1;transl_table=11 NZ_JAIKUA010000012.1 RefSeq gene 9379 9879 . - . ID=gene-L2557_RS01035;Name=umoD;gbkey=Gene;gene=umoD;gene_biotype=protein_coding;locus_tag=L2557_RS01035 NZ_JAIKUA010000012.1 Protein Homology CDS 9379 9879 . - 0 ID=cds-WP_075673194.1;Parent=gene-L2557_RS01035;Dbxref=GenBank:WP_075673194.1;Name=WP_075673194.1;gbkey=CDS;gene=umoD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537231.1;locus_tag=L2557_RS01035;product=flagellar biogenesis regulator UmoD;protein_id=WP_075673194.1;transl_table=11 ##sequence-region NZ_JAIKUA010000120.1 1 6043 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000120.1 RefSeq region 1 6043 . + . ID=NZ_JAIKUA010000120.1:1..6043;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000120.1 RefSeq gene 265 477 . - . ID=gene-L2557_RS08790;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=L2557_RS08790 NZ_JAIKUA010000120.1 Protein Homology CDS 265 477 . - 0 ID=cds-WP_006537332.1;Parent=gene-L2557_RS08790;Dbxref=GenBank:WP_006537332.1;Name=WP_006537332.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537195.1;locus_tag=L2557_RS08790;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_006537332.1;transl_table=11 NZ_JAIKUA010000120.1 RefSeq gene 874 1731 . - . ID=gene-L2557_RS08795;Name=L2557_RS08795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08795 NZ_JAIKUA010000120.1 Protein Homology CDS 874 1731 . - 0 ID=cds-WP_075674313.1;Parent=gene-L2557_RS08795;Dbxref=GenBank:WP_075674313.1;Name=WP_075674313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004235532.1;locus_tag=L2557_RS08795;product=alpha/beta fold hydrolase;protein_id=WP_075674313.1;transl_table=11 NZ_JAIKUA010000120.1 RefSeq gene 1993 2529 . - . ID=gene-L2557_RS08800;Name=L2557_RS08800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08800 NZ_JAIKUA010000120.1 Protein Homology CDS 1993 2529 . - 0 ID=cds-WP_075674311.1;Parent=gene-L2557_RS08800;Dbxref=GenBank:WP_075674311.1;Name=WP_075674311.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918308.1;locus_tag=L2557_RS08800;product=GNAT family N-acetyltransferase;protein_id=WP_075674311.1;transl_table=11 NZ_JAIKUA010000120.1 RefSeq gene 2732 3064 . - . ID=gene-L2557_RS08805;Name=L2557_RS08805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08805 NZ_JAIKUA010000120.1 Protein Homology CDS 2732 3064 . - 0 ID=cds-WP_075674310.1;Parent=gene-L2557_RS08805;Dbxref=GenBank:WP_075674310.1;Name=WP_075674310.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367747.1;locus_tag=L2557_RS08805;product=MliC family protein;protein_id=WP_075674310.1;transl_table=11 NZ_JAIKUA010000120.1 RefSeq gene 3443 4339 . + . ID=gene-L2557_RS08810;Name=L2557_RS08810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08810 NZ_JAIKUA010000120.1 Protein Homology CDS 3443 4339 . + 0 ID=cds-WP_075674309.1;Parent=gene-L2557_RS08810;Dbxref=GenBank:WP_075674309.1;Name=WP_075674309.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827332.1;locus_tag=L2557_RS08810;product=AraC family transcriptional regulator;protein_id=WP_075674309.1;transl_table=11 NZ_JAIKUA010000120.1 RefSeq gene 4410 5906 . - . ID=gene-L2557_RS08815;Name=L2557_RS08815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08815 NZ_JAIKUA010000120.1 Protein Homology CDS 4410 5906 . - 0 ID=cds-WP_235409998.1;Parent=gene-L2557_RS08815;Dbxref=GenBank:WP_235409998.1;Name=WP_235409998.1;Ontology_term=GO:0006508,GO:0016805;gbkey=CDS;go_function=dipeptidase activity|0016805||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121531.1;locus_tag=L2557_RS08815;product=C69 family dipeptidase;protein_id=WP_235409998.1;transl_table=11 ##sequence-region NZ_JAIKUA010000121.1 1 6781 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000121.1 RefSeq region 1 6781 . + . ID=NZ_JAIKUA010000121.1:1..6781;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000121.1 RefSeq pseudogene 1 216 . + . ID=gene-L2557_RS08820;Name=L2557_RS08820;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS08820;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000121.1 Protein Homology CDS 1 216 . + 0 ID=cds-L2557_RS08820;Parent=gene-L2557_RS08820;Note=activator of the allDC-ylbA operon involved in allantoin utilization%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534047.1;locus_tag=L2557_RS08820;partial=true;product=HTH-type transcriptional activator AllS;pseudo=true;start_range=.,1;transl_table=11 NZ_JAIKUA010000121.1 RefSeq gene 275 1519 . - . ID=gene-L2557_RS08825;Name=L2557_RS08825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08825 NZ_JAIKUA010000121.1 Protein Homology CDS 275 1519 . - 0 ID=cds-WP_075673296.1;Parent=gene-L2557_RS08825;Dbxref=GenBank:WP_075673296.1;Name=WP_075673296.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534048.1;locus_tag=L2557_RS08825;product=MFS transporter;protein_id=WP_075673296.1;transl_table=11 NZ_JAIKUA010000121.1 RefSeq gene 1545 2450 . - . ID=gene-L2557_RS08830;Name=L2557_RS08830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08830 NZ_JAIKUA010000121.1 Protein Homology CDS 1545 2450 . - 0 ID=cds-WP_075673295.1;Parent=gene-L2557_RS08830;Dbxref=GenBank:WP_075673295.1;Name=WP_075673295.1;Ontology_term=GO:0006525,GO:0008804;gbkey=CDS;go_function=carbamate kinase activity|0008804||IEA;go_process=arginine metabolic process|0006525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244298.1;locus_tag=L2557_RS08830;product=carbamate kinase;protein_id=WP_075673295.1;transl_table=11 NZ_JAIKUA010000121.1 RefSeq gene 2498 3325 . - . ID=gene-L2557_RS08835;Name=L2557_RS08835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08835 NZ_JAIKUA010000121.1 Protein Homology CDS 2498 3325 . - 0 ID=cds-WP_075673294.1;Parent=gene-L2557_RS08835;Dbxref=GenBank:WP_075673294.1;Name=WP_075673294.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248662.1;locus_tag=L2557_RS08835;product=oxamate carbamoyltransferase subunit AllH family protein;protein_id=WP_075673294.1;transl_table=11 NZ_JAIKUA010000121.1 RefSeq gene 3368 4633 . - . ID=gene-L2557_RS08840;Name=L2557_RS08840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08840 NZ_JAIKUA010000121.1 Protein Homology CDS 3368 4633 . - 0 ID=cds-WP_075673293.1;Parent=gene-L2557_RS08840;Dbxref=GenBank:WP_075673293.1;Name=WP_075673293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000287391.1;locus_tag=L2557_RS08840;product=YlbE family protein;protein_id=WP_075673293.1;transl_table=11 NZ_JAIKUA010000121.1 RefSeq gene 4646 6313 . - . ID=gene-L2557_RS08845;Name=L2557_RS08845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08845 NZ_JAIKUA010000121.1 Protein Homology CDS 4646 6313 . - 0 ID=cds-WP_099660080.1;Parent=gene-L2557_RS08845;Dbxref=GenBank:WP_099660080.1;Name=WP_099660080.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248663.1;locus_tag=L2557_RS08845;product=acyl-CoA synthetase FdrA;protein_id=WP_099660080.1;transl_table=11 ##sequence-region NZ_JAIKUA010000122.1 1 30712 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000122.1 RefSeq region 1 30712 . + . ID=NZ_JAIKUA010000122.1:1..30712;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000122.1 RefSeq gene 279 380 . + . ID=gene-L2557_RS08850;Name=ilvL;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=L2557_RS08850 NZ_JAIKUA010000122.1 Protein Homology CDS 279 380 . + 0 ID=cds-WP_071788577.1;Parent=gene-L2557_RS08850;Dbxref=GenBank:WP_071788577.1;Name=WP_071788577.1;Ontology_term=GO:0031556;gbkey=CDS;gene=ilvL;go_process=transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827031.1;locus_tag=L2557_RS08850;product=ilv operon leader peptide;protein_id=WP_071788577.1;transl_table=11 NZ_JAIKUA010000122.1 RefSeq gene 511 2160 . + . ID=gene-L2557_RS08855;Name=ilvG;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=L2557_RS08855 NZ_JAIKUA010000122.1 Protein Homology CDS 511 2160 . + 0 ID=cds-WP_075674043.1;Parent=gene-L2557_RS08855;Dbxref=GenBank:WP_075674043.1;Name=WP_075674043.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvG;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246367.1;locus_tag=L2557_RS08855;product=acetolactate synthase 2 catalytic subunit;protein_id=WP_075674043.1;transl_table=11 NZ_JAIKUA010000122.1 RefSeq gene 2157 2432 . + . ID=gene-L2557_RS08860;Name=ilvM;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=L2557_RS08860 NZ_JAIKUA010000122.1 Protein Homology CDS 2157 2432 . + 0 ID=cds-WP_075674044.1;Parent=gene-L2557_RS08860;Dbxref=GenBank:WP_075674044.1;Name=WP_075674044.1;gbkey=CDS;gene=ilvM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246366.1;locus_tag=L2557_RS08860;product=acetolactate synthase 2 small subunit;protein_id=WP_075674044.1;transl_table=11 NZ_JAIKUA010000122.1 RefSeq gene 2443 3369 . + . ID=gene-L2557_RS08865;Name=ilvE;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=L2557_RS08865 NZ_JAIKUA010000122.1 Protein Homology CDS 2443 3369 . + 0 ID=cds-WP_023583659.1;Parent=gene-L2557_RS08865;Dbxref=GenBank:WP_023583659.1;Name=WP_023583659.1;Ontology_term=GO:0009081,GO:0004084;gbkey=CDS;gene=ilvE;go_function=branched-chain-amino-acid transaminase activity|0004084||IEA;go_process=branched-chain amino acid metabolic process|0009081||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004956462.1;locus_tag=L2557_RS08865;product=branched-chain-amino-acid transaminase;protein_id=WP_023583659.1;transl_table=11 NZ_JAIKUA010000122.1 RefSeq gene 3442 5292 . + . ID=gene-L2557_RS08870;Name=ilvD;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=L2557_RS08870 NZ_JAIKUA010000122.1 Protein Homology CDS 3442 5292 . + 0 ID=cds-WP_075674045.1;Parent=gene-L2557_RS08870;Dbxref=GenBank:WP_075674045.1;Name=WP_075674045.1;Ontology_term=GO:0009082,GO:0004160;gbkey=CDS;gene=ilvD;go_function=dihydroxy-acid dehydratase activity|0004160||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133366.1;locus_tag=L2557_RS08870;product=dihydroxy-acid dehydratase;protein_id=WP_075674045.1;transl_table=11 NZ_JAIKUA010000122.1 RefSeq gene 5295 6869 . + . ID=gene-L2557_RS08875;Name=ilvA;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=L2557_RS08875 NZ_JAIKUA010000122.1 Protein Homology CDS 5295 6869 . + 0 ID=cds-WP_075674046.1;Parent=gene-L2557_RS08875;Dbxref=GenBank:WP_075674046.1;Name=WP_075674046.1;Ontology_term=GO:0009097,GO:0004794;gbkey=CDS;gene=ilvA;go_function=threonine deaminase activity|0004794||IEA;go_process=isoleucine biosynthetic process|0009097||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246363.1;locus_tag=L2557_RS08875;product=threonine ammonia-lyase%2C biosynthetic;protein_id=WP_075674046.1;transl_table=11 NZ_JAIKUA010000122.1 RefSeq gene 6855 7742 . - . ID=gene-L2557_RS08880;Name=ilvY;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=L2557_RS08880 NZ_JAIKUA010000122.1 Protein Homology CDS 6855 7742 . - 0 ID=cds-WP_075674047.1;Parent=gene-L2557_RS08880;Dbxref=GenBank:WP_075674047.1;Name=WP_075674047.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=ilvY;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535847.1;locus_tag=L2557_RS08880;product=HTH-type transcriptional activator IlvY;protein_id=WP_075674047.1;transl_table=11 NZ_JAIKUA010000122.1 RefSeq gene 7913 9388 . + . ID=gene-L2557_RS08885;Name=ilvC;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=L2557_RS08885 NZ_JAIKUA010000122.1 Protein Homology CDS 7913 9388 . + 0 ID=cds-WP_075674048.1;Parent=gene-L2557_RS08885;Dbxref=GenBank:WP_075674048.1;Name=WP_075674048.1;Ontology_term=GO:0009082,GO:0004455;gbkey=CDS;gene=ilvC;go_function=ketol-acid reductoisomerase activity|0004455||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012907949.1;locus_tag=L2557_RS08885;product=ketol-acid reductoisomerase;protein_id=WP_075674048.1;transl_table=11 NZ_JAIKUA010000122.1 RefSeq gene 9693 11717 . + . ID=gene-L2557_RS08890;Name=rep;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=L2557_RS08890 NZ_JAIKUA010000122.1 Protein Homology CDS 9693 11717 . + 0 ID=cds-WP_075674049.1;Parent=gene-L2557_RS08890;Dbxref=GenBank:WP_075674049.1;Name=WP_075674049.1;Ontology_term=GO:0006260,GO:0003678;gbkey=CDS;gene=rep;go_function=DNA helicase activity|0003678||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004234388.1;locus_tag=L2557_RS08890;product=DNA helicase Rep;protein_id=WP_075674049.1;transl_table=11 NZ_JAIKUA010000122.1 RefSeq gene 11795 13303 . - . ID=gene-L2557_RS08895;Name=gppA;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=L2557_RS08895 NZ_JAIKUA010000122.1 Protein Homology CDS 11795 13303 . - 0 ID=cds-WP_075674050.1;Parent=gene-L2557_RS08895;Dbxref=GenBank:WP_075674050.1;Name=WP_075674050.1;Ontology_term=GO:0015974,GO:0008894;gbkey=CDS;gene=gppA;go_function=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase activity|0008894||IEA;go_process=guanosine pentaphosphate catabolic process|0015974||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845330.1;locus_tag=L2557_RS08895;product=guanosine-5'-triphosphate%2C3'-diphosphate diphosphatase;protein_id=WP_075674050.1;transl_table=11 NZ_JAIKUA010000122.1 RefSeq gene 13307 14611 . - . ID=gene-L2557_RS08900;Name=rhlB;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=L2557_RS08900 NZ_JAIKUA010000122.1 Protein Homology CDS 13307 14611 . - 0 ID=cds-WP_099660302.1;Parent=gene-L2557_RS08900;Dbxref=GenBank:WP_099660302.1;Name=WP_099660302.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=rhlB;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249672.1;locus_tag=L2557_RS08900;product=ATP-dependent RNA helicase RhlB;protein_id=WP_099660302.1;transl_table=11 NZ_JAIKUA010000122.1 RefSeq gene 14731 15057 . + . ID=gene-L2557_RS08905;Name=trxA;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=L2557_RS08905 NZ_JAIKUA010000122.1 Protein Homology CDS 14731 15057 . + 0 ID=cds-WP_006535838.1;Parent=gene-L2557_RS08905;Dbxref=GenBank:WP_006535838.1;Name=WP_006535838.1;Ontology_term=GO:0045454,GO:0015035;gbkey=CDS;gene=trxA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005290144.1;locus_tag=L2557_RS08905;product=thioredoxin TrxA;protein_id=WP_006535838.1;transl_table=11 NZ_JAIKUA010000122.1 RefSeq gene 15624 16883 . + . ID=gene-L2557_RS08910;Name=rho;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=L2557_RS08910 NZ_JAIKUA010000122.1 Protein Homology CDS 15624 16883 . + 0 ID=cds-WP_023583649.1;Parent=gene-L2557_RS08910;Dbxref=GenBank:WP_023583649.1;Name=WP_023583649.1;Ontology_term=GO:0006353,GO:0003723,GO:0005524,GO:0008186;gbkey=CDS;gene=rho;go_function=RNA binding|0003723||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on RNA|0008186||IEA;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017492510.1;locus_tag=L2557_RS08910;product=transcription termination factor Rho;protein_id=WP_023583649.1;transl_table=11 NZ_JAIKUA010000122.1 RefSeq gene 17291 18379 . + . ID=gene-L2557_RS08915;Name=wecA;gbkey=Gene;gene=wecA;gene_biotype=protein_coding;locus_tag=L2557_RS08915 NZ_JAIKUA010000122.1 Protein Homology CDS 17291 18379 . + 0 ID=cds-WP_036939595.1;Parent=gene-L2557_RS08915;Dbxref=GenBank:WP_036939595.1;Name=WP_036939595.1;Ontology_term=GO:0009103,GO:0009246,GO:0000287,GO:0016780,GO:0030145,GO:0036380,GO:0009276,GO:0016020;gbkey=CDS;gene=wecA;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA,membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA,manganese ion binding|0030145||IEA,UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity|0036380||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004721643.1;locus_tag=L2557_RS08915;product=UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase;protein_id=WP_036939595.1;transl_table=11 NZ_JAIKUA010000122.1 RefSeq gene 18404 19462 . + . ID=gene-L2557_RS08920;Name=wzzE;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=L2557_RS08920 NZ_JAIKUA010000122.1 Protein Homology CDS 18404 19462 . + 0 ID=cds-WP_099660301.1;Parent=gene-L2557_RS08920;Dbxref=GenBank:WP_099660301.1;Name=WP_099660301.1;Ontology_term=GO:0009103,GO:0009246,GO:0016020;gbkey=CDS;gene=wzzE;go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA,enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246351.1;locus_tag=L2557_RS08920;product=ECA polysaccharide chain length modulation protein;protein_id=WP_099660301.1;transl_table=11 NZ_JAIKUA010000122.1 RefSeq gene 19589 20719 . + . ID=gene-L2557_RS08925;Name=wecB;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=L2557_RS08925 NZ_JAIKUA010000122.1 Protein Homology CDS 19589 20719 . + 0 ID=cds-WP_099660300.1;Parent=gene-L2557_RS08925;Dbxref=GenBank:WP_099660300.1;Name=WP_099660300.1;Ontology_term=GO:0008761;gbkey=CDS;gene=wecB;go_function=UDP-N-acetylglucosamine 2-epimerase activity|0008761||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312746.2;locus_tag=L2557_RS08925;product=non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase;protein_id=WP_099660300.1;transl_table=11 NZ_JAIKUA010000122.1 RefSeq gene 20716 21978 . + . ID=gene-L2557_RS08930;Name=wecC;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=L2557_RS08930 NZ_JAIKUA010000122.1 Protein Homology CDS 20716 21978 . + 0 ID=cds-WP_099660299.1;Parent=gene-L2557_RS08930;Dbxref=GenBank:WP_099660299.1;Name=WP_099660299.1;Ontology_term=GO:0009246,GO:0051287,GO:0089714;gbkey=CDS;gene=wecC;go_function=NAD binding|0051287||IEA,UDP-N-acetyl-D-mannosamine dehydrogenase activity|0089714||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312747.1;locus_tag=L2557_RS08930;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=WP_099660299.1;transl_table=11 NZ_JAIKUA010000122.1 RefSeq gene 21975 23042 . + . ID=gene-L2557_RS08935;Name=rffG;gbkey=Gene;gene=rffG;gene_biotype=protein_coding;locus_tag=L2557_RS08935 NZ_JAIKUA010000122.1 Protein Homology CDS 21975 23042 . + 0 ID=cds-WP_098944023.1;Parent=gene-L2557_RS08935;Dbxref=GenBank:WP_098944023.1;Name=WP_098944023.1;Ontology_term=GO:0009225,GO:0008460;gbkey=CDS;gene=rffG;go_function=dTDP-glucose 4%2C6-dehydratase activity|0008460||IEA;go_process=nucleotide-sugar metabolic process|0009225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191500.1;locus_tag=L2557_RS08935;product=dTDP-glucose 4%2C6-dehydratase;protein_id=WP_098944023.1;transl_table=11 NZ_JAIKUA010000122.1 RefSeq gene 23064 23945 . + . ID=gene-L2557_RS08940;Name=rfbA;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=L2557_RS08940 NZ_JAIKUA010000122.1 Protein Homology CDS 23064 23945 . + 0 ID=cds-WP_075674228.1;Parent=gene-L2557_RS08940;Dbxref=GenBank:WP_075674228.1;Name=WP_075674228.1;Ontology_term=GO:0000271,GO:0019305,GO:0008879;gbkey=CDS;gene=rfbA;go_function=glucose-1-phosphate thymidylyltransferase activity|0008879||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA,dTDP-rhamnose biosynthetic process|0019305||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004957327.1;locus_tag=L2557_RS08940;product=glucose-1-phosphate thymidylyltransferase RfbA;protein_id=WP_075674228.1;transl_table=11 NZ_JAIKUA010000122.1 RefSeq gene 23923 24636 . + . ID=gene-L2557_RS08945;Name=rffC;gbkey=Gene;gene=rffC;gene_biotype=protein_coding;gene_synonym=wecD;locus_tag=L2557_RS08945 NZ_JAIKUA010000122.1 Protein Homology CDS 23923 24636 . + 0 ID=cds-WP_159242208.1;Parent=gene-L2557_RS08945;Dbxref=GenBank:WP_159242208.1;Name=WP_159242208.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rffC;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246344.1;locus_tag=L2557_RS08945;product=dTDP-4-amino-4%2C6-dideoxy-D-galactose acyltransferase;protein_id=WP_159242208.1;transl_table=11 NZ_JAIKUA010000122.1 RefSeq gene 24638 25768 . + . ID=gene-L2557_RS08950;Name=rffA;gbkey=Gene;gene=rffA;gene_biotype=protein_coding;gene_synonym=fcnA,wecE;locus_tag=L2557_RS08950 NZ_JAIKUA010000122.1 Protein Homology CDS 24638 25768 . + 0 ID=cds-WP_075674230.1;Parent=gene-L2557_RS08950;Dbxref=GenBank:WP_075674230.1;Name=WP_075674230.1;Ontology_term=GO:0009246,GO:0019180;gbkey=CDS;gene=rffA;go_function=dTDP-4-amino-4%2C6-dideoxygalactose transaminase activity|0019180||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004906094.1;locus_tag=L2557_RS08950;product=dTDP-4-amino-4%2C6-dideoxygalactose transaminase;protein_id=WP_075674230.1;transl_table=11 NZ_JAIKUA010000122.1 RefSeq gene 25771 27027 . + . ID=gene-L2557_RS08955;Name=wzxE;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=L2557_RS08955 NZ_JAIKUA010000122.1 Protein Homology CDS 25771 27027 . + 0 ID=cds-WP_099660297.1;Parent=gene-L2557_RS08955;Dbxref=GenBank:WP_099660297.1;Name=WP_099660297.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzxE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368703.1;locus_tag=L2557_RS08955;product=lipid III flippase WzxE;protein_id=WP_099660297.1;transl_table=11 NZ_JAIKUA010000122.1 RefSeq gene 27024 28109 . + . ID=gene-L2557_RS08960;Name=L2557_RS08960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08960 NZ_JAIKUA010000122.1 Protein Homology CDS 27024 28109 . + 0 ID=cds-WP_099660296.1;Parent=gene-L2557_RS08960;Dbxref=GenBank:WP_099660296.1;Name=WP_099660296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246341.1;locus_tag=L2557_RS08960;product=TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase;protein_id=WP_099660296.1;transl_table=11 NZ_JAIKUA010000122.1 RefSeq gene 28106 29473 . + . ID=gene-L2557_RS08965;Name=wzyE;gbkey=Gene;gene=wzyE;gene_biotype=protein_coding;locus_tag=L2557_RS08965 NZ_JAIKUA010000122.1 Protein Homology CDS 28106 29473 . + 0 ID=cds-WP_075674233.1;Parent=gene-L2557_RS08965;Dbxref=GenBank:WP_075674233.1;Name=WP_075674233.1;Ontology_term=GO:0009246,GO:0016020;gbkey=CDS;gene=wzyE;go_component=membrane|0016020||IEA;go_process=enterobacterial common antigen biosynthetic process|0009246||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246340.1;locus_tag=L2557_RS08965;product=ECA oligosaccharide polymerase;protein_id=WP_075674233.1;transl_table=11 NZ_JAIKUA010000122.1 RefSeq gene 29473 30210 . + . ID=gene-L2557_RS08970;Name=wecG;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=L2557_RS08970 NZ_JAIKUA010000122.1 Protein Homology CDS 29473 30210 . + 0 ID=cds-WP_075674234.1;Parent=gene-L2557_RS08970;Dbxref=GenBank:WP_075674234.1;Name=WP_075674234.1;Ontology_term=GO:0047241;gbkey=CDS;gene=wecG;go_function=lipopolysaccharide N-acetylmannosaminouronosyltransferase activity|0047241||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249663.1;locus_tag=L2557_RS08970;product=lipopolysaccharide N-acetylmannosaminouronosyltransferase;protein_id=WP_075674234.1;transl_table=11 NZ_JAIKUA010000122.1 RefSeq gene 30438 30514 . + . ID=gene-L2557_RS08975;Name=L2557_RS08975;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS08975 NZ_JAIKUA010000122.1 tRNAscan-SE tRNA 30438 30514 . + . ID=rna-L2557_RS08975;Parent=gene-L2557_RS08975;anticodon=(pos:30472..30474);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS08975;product=tRNA-Arg NZ_JAIKUA010000122.1 tRNAscan-SE exon 30438 30514 . + . ID=exon-L2557_RS08975-1;Parent=rna-L2557_RS08975;anticodon=(pos:30472..30474);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS08975;product=tRNA-Arg NZ_JAIKUA010000122.1 RefSeq gene 30579 30654 . + . ID=gene-L2557_RS08980;Name=L2557_RS08980;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS08980 NZ_JAIKUA010000122.1 tRNAscan-SE tRNA 30579 30654 . + . ID=rna-L2557_RS08980;Parent=gene-L2557_RS08980;anticodon=(pos:30612..30614);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS08980;product=tRNA-His NZ_JAIKUA010000122.1 tRNAscan-SE exon 30579 30654 . + . ID=exon-L2557_RS08980-1;Parent=rna-L2557_RS08980;anticodon=(pos:30612..30614);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS08980;product=tRNA-His ##sequence-region NZ_JAIKUA010000123.1 1 2950 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000123.1 RefSeq region 1 2950 . + . ID=NZ_JAIKUA010000123.1:1..2950;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000123.1 RefSeq gene 102 1676 . + . ID=gene-L2557_RS08985;Name=L2557_RS08985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08985 NZ_JAIKUA010000123.1 Protein Homology CDS 102 1676 . + 0 ID=cds-WP_099659916.1;Parent=gene-L2557_RS08985;Dbxref=GenBank:WP_099659916.1;Name=WP_099659916.1;Ontology_term=GO:1902604,GO:0015558;gbkey=CDS;go_function=secondary active p-aminobenzoyl-glutamate transmembrane transporter activity|0015558||IEA;go_process=p-aminobenzoyl-glutamate transmembrane transport|1902604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628308.1;locus_tag=L2557_RS08985;product=AbgT family transporter;protein_id=WP_099659916.1;transl_table=11 NZ_JAIKUA010000123.1 RefSeq gene 1738 2127 . - . ID=gene-L2557_RS08990;Name=L2557_RS08990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08990 NZ_JAIKUA010000123.1 Protein Homology CDS 1738 2127 . - 0 ID=cds-WP_075674096.1;Parent=gene-L2557_RS08990;Dbxref=GenBank:WP_075674096.1;Name=WP_075674096.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244915.1;locus_tag=L2557_RS08990;product=DnaJ family domain-containing protein;protein_id=WP_075674096.1;transl_table=11 NZ_JAIKUA010000123.1 RefSeq gene 2258 2596 . + . ID=gene-L2557_RS08995;Name=L2557_RS08995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS08995 NZ_JAIKUA010000123.1 Protein Homology CDS 2258 2596 . + 0 ID=cds-WP_023581047.1;Parent=gene-L2557_RS08995;Dbxref=GenBank:WP_023581047.1;Name=WP_023581047.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628310.1;locus_tag=L2557_RS08995;product=carboxymuconolactone decarboxylase family protein;protein_id=WP_023581047.1;transl_table=11 ##sequence-region NZ_JAIKUA010000124.1 1 5144 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000124.1 RefSeq region 1 5144 . + . ID=NZ_JAIKUA010000124.1:1..5144;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000124.1 RefSeq gene 1 1050 . + . ID=gene-L2557_RS09000;Name=ftsY;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=L2557_RS09000;partial=true;start_range=.,1 NZ_JAIKUA010000124.1 Protein Homology CDS 1 1050 . + 0 ID=cds-WP_235409999.1;Parent=gene-L2557_RS09000;Dbxref=GenBank:WP_235409999.1;Name=WP_235409999.1;Ontology_term=GO:0006614,GO:0009306,GO:0003924,GO:0005047;gbkey=CDS;gene=ftsY;go_function=GTPase activity|0003924||IEA,signal recognition particle binding|0005047||IEA;go_process=SRP-dependent cotranslational protein targeting to membrane|0006614||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535411.1;locus_tag=L2557_RS09000;partial=true;product=signal recognition particle-docking protein FtsY;protein_id=WP_235409999.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000124.1 RefSeq gene 1056 1721 . + . ID=gene-L2557_RS09005;Name=ftsE;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=L2557_RS09005 NZ_JAIKUA010000124.1 Protein Homology CDS 1056 1721 . + 0 ID=cds-WP_023583735.1;Parent=gene-L2557_RS09005;Dbxref=GenBank:WP_023583735.1;Name=WP_023583735.1;Ontology_term=GO:0000910,GO:0005524;gbkey=CDS;gene=ftsE;go_function=ATP binding|0005524||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258545.1;locus_tag=L2557_RS09005;product=cell division ATP-binding protein FtsE;protein_id=WP_023583735.1;transl_table=11 NZ_JAIKUA010000124.1 RefSeq gene 1714 2691 . + . ID=gene-L2557_RS09010;Name=ftsX;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=L2557_RS09010 NZ_JAIKUA010000124.1 Protein Homology CDS 1714 2691 . + 0 ID=cds-WP_075674344.1;Parent=gene-L2557_RS09010;Dbxref=GenBank:WP_075674344.1;Name=WP_075674344.1;Ontology_term=GO:0000910;gbkey=CDS;gene=ftsX;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368819.1;locus_tag=L2557_RS09010;product=permease-like cell division protein FtsX;protein_id=WP_075674344.1;transl_table=11 NZ_JAIKUA010000124.1 RefSeq gene 3046 3900 . + . ID=gene-L2557_RS09015;Name=rpoH;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=L2557_RS09015 NZ_JAIKUA010000124.1 Protein Homology CDS 3046 3900 . + 0 ID=cds-WP_235410000.1;Parent=gene-L2557_RS09015;Dbxref=GenBank:WP_235410000.1;Name=WP_235410000.1;Ontology_term=GO:0006352,GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoH;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245383.1;locus_tag=L2557_RS09015;product=RNA polymerase sigma factor RpoH;protein_id=WP_235410000.1;transl_table=11 NZ_JAIKUA010000124.1 RefSeq gene 3994 5144 . + . ID=gene-L2557_RS09020;Name=L2557_RS09020;end_range=5144,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09020;partial=true NZ_JAIKUA010000124.1 Protein Homology CDS 3994 5144 . + 0 ID=cds-WP_235410001.1;Parent=gene-L2557_RS09020;Dbxref=GenBank:WP_235410001.1;Name=WP_235410001.1;Ontology_term=GO:0005524,GO:0008887;end_range=5144,.;gbkey=CDS;go_function=ATP binding|0005524||IEA,glycerate kinase activity|0008887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535406.1;locus_tag=L2557_RS09020;partial=true;product=glycerate kinase;protein_id=WP_235410001.1;transl_table=11 ##sequence-region NZ_JAIKUA010000125.1 1 7831 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000125.1 RefSeq region 1 7831 . + . ID=NZ_JAIKUA010000125.1:1..7831;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000125.1 RefSeq gene 333 1889 . + . ID=gene-L2557_RS09025;Name=L2557_RS09025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09025 NZ_JAIKUA010000125.1 Protein Homology CDS 333 1889 . + 0 ID=cds-WP_099659802.1;Parent=gene-L2557_RS09025;Dbxref=GenBank:WP_099659802.1;Name=WP_099659802.1;Ontology_term=GO:0005506,GO:0009055,GO:0016695,GO:0051539;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,oxidoreductase activity%2C acting on hydrogen as donor|0016695||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: protein motif:HMM:TIGR02512.1;locus_tag=L2557_RS09025;product=[FeFe] hydrogenase%2C group A;protein_id=WP_099659802.1;transl_table=11 NZ_JAIKUA010000125.1 RefSeq gene 1908 2732 . + . ID=gene-L2557_RS09030;Name=L2557_RS09030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09030 NZ_JAIKUA010000125.1 Protein Homology CDS 1908 2732 . + 0 ID=cds-WP_099659801.1;Parent=gene-L2557_RS09030;Dbxref=GenBank:WP_099659801.1;Name=WP_099659801.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024644.6;locus_tag=L2557_RS09030;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_099659801.1;transl_table=11 NZ_JAIKUA010000125.1 RefSeq gene 2729 3874 . + . ID=gene-L2557_RS09035;Name=nrfD;gbkey=Gene;gene=nrfD;gene_biotype=protein_coding;locus_tag=L2557_RS09035 NZ_JAIKUA010000125.1 Protein Homology CDS 2729 3874 . + 0 ID=cds-WP_098943804.1;Parent=gene-L2557_RS09035;Dbxref=GenBank:WP_098943804.1;Name=WP_098943804.1;gbkey=CDS;gene=nrfD;inference=COORDINATES: protein motif:HMM:NF015851.6;locus_tag=L2557_RS09035;product=NrfD/PsrC family molybdoenzyme membrane anchor subunit;protein_id=WP_098943804.1;transl_table=11 NZ_JAIKUA010000125.1 RefSeq gene 3936 5969 . + . ID=gene-L2557_RS09040;Name=L2557_RS09040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09040 NZ_JAIKUA010000125.1 Protein Homology CDS 3936 5969 . + 0 ID=cds-WP_098943803.1;Parent=gene-L2557_RS09040;Dbxref=GenBank:WP_098943803.1;Name=WP_098943803.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812718.1;locus_tag=L2557_RS09040;product=TonB-dependent receptor family protein;protein_id=WP_098943803.1;transl_table=11 NZ_JAIKUA010000125.1 RefSeq gene 6057 6563 . - . ID=gene-L2557_RS09045;Name=dps;gbkey=Gene;gene=dps;gene_biotype=protein_coding;gene_synonym=pexB;locus_tag=L2557_RS09045 NZ_JAIKUA010000125.1 Protein Homology CDS 6057 6563 . - 0 ID=cds-WP_075672771.1;Parent=gene-L2557_RS09045;Dbxref=GenBank:WP_075672771.1;Name=WP_075672771.1;Ontology_term=GO:0016722;gbkey=CDS;gene=dps;go_function=oxidoreductase activity%2C acting on metal ions|0016722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244496.1;locus_tag=L2557_RS09045;product=DNA starvation/stationary phase protection protein Dps;protein_id=WP_075672771.1;transl_table=11 NZ_JAIKUA010000125.1 RefSeq gene 6838 7728 . - . ID=gene-L2557_RS09050;Name=rhtA;gbkey=Gene;gene=rhtA;gene_biotype=protein_coding;locus_tag=L2557_RS09050 NZ_JAIKUA010000125.1 Protein Homology CDS 6838 7728 . - 0 ID=cds-WP_075672772.1;Parent=gene-L2557_RS09050;Dbxref=GenBank:WP_075672772.1;Name=WP_075672772.1;gbkey=CDS;gene=rhtA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244497.1;locus_tag=L2557_RS09050;product=threonine/homoserine exporter RhtA;protein_id=WP_075672772.1;transl_table=11 ##sequence-region NZ_JAIKUA010000126.1 1 25173 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000126.1 RefSeq region 1 25173 . + . ID=NZ_JAIKUA010000126.1:1..25173;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000126.1 RefSeq gene 92 3241 . - . ID=gene-L2557_RS09055;Name=L2557_RS09055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09055 NZ_JAIKUA010000126.1 Protein Homology CDS 92 3241 . - 0 ID=cds-WP_075671963.1;Parent=gene-L2557_RS09055;Dbxref=GenBank:WP_075671963.1;Name=WP_075671963.1;Ontology_term=GO:0042908,GO:0015562,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661069.1;locus_tag=L2557_RS09055;product=efflux RND transporter permease subunit;protein_id=WP_075671963.1;transl_table=11 NZ_JAIKUA010000126.1 RefSeq gene 3256 4449 . - . ID=gene-L2557_RS09060;Name=L2557_RS09060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09060 NZ_JAIKUA010000126.1 Protein Homology CDS 3256 4449 . - 0 ID=cds-WP_075671961.1;Parent=gene-L2557_RS09060;Dbxref=GenBank:WP_075671961.1;Name=WP_075671961.1;Ontology_term=GO:0006810,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245071.1;locus_tag=L2557_RS09060;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_075671961.1;transl_table=11 NZ_JAIKUA010000126.1 RefSeq gene 4574 5218 . + . ID=gene-L2557_RS09065;Name=acrR;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=L2557_RS09065 NZ_JAIKUA010000126.1 Protein Homology CDS 4574 5218 . + 0 ID=cds-WP_075671959.1;Parent=gene-L2557_RS09065;Dbxref=GenBank:WP_075671959.1;Name=WP_075671959.1;gbkey=CDS;gene=acrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252544.1;locus_tag=L2557_RS09065;product=multidrug efflux transporter transcriptional repressor AcrR;protein_id=WP_075671959.1;transl_table=11 NZ_JAIKUA010000126.1 RefSeq gene 5247 5600 . + . ID=gene-L2557_RS09070;Name=L2557_RS09070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09070 NZ_JAIKUA010000126.1 Protein Homology CDS 5247 5600 . + 0 ID=cds-WP_023580846.1;Parent=gene-L2557_RS09070;Dbxref=GenBank:WP_023580846.1;Name=WP_023580846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535056.1;locus_tag=L2557_RS09070;product=DsrE/DsrF/TusD sulfur relay family protein;protein_id=WP_023580846.1;transl_table=11 NZ_JAIKUA010000126.1 RefSeq gene 5769 9149 . + . ID=gene-L2557_RS09075;Name=mscK;gbkey=Gene;gene=mscK;gene_biotype=protein_coding;locus_tag=L2557_RS09075 NZ_JAIKUA010000126.1 Protein Homology CDS 5769 9149 . + 0 ID=cds-WP_223673859.1;Parent=gene-L2557_RS09075;Dbxref=GenBank:WP_223673859.1;Name=WP_223673859.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscK;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367484.1;locus_tag=L2557_RS09075;product=mechanosensitive channel MscK;protein_id=WP_223673859.1;transl_table=11 NZ_JAIKUA010000126.1 RefSeq gene 9150 9314 . - . ID=gene-L2557_RS09080;Name=rsmS;gbkey=Gene;gene=rsmS;gene_biotype=protein_coding;locus_tag=L2557_RS09080 NZ_JAIKUA010000126.1 Protein Homology CDS 9150 9314 . - 0 ID=cds-WP_075671955.1;Parent=gene-L2557_RS09080;Dbxref=GenBank:WP_075671955.1;Name=WP_075671955.1;gbkey=CDS;gene=rsmS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535052.1;locus_tag=L2557_RS09080;product=pleiotropic regulatory protein RsmS;protein_id=WP_075671955.1;transl_table=11 NZ_JAIKUA010000126.1 RefSeq gene 9326 9868 . - . ID=gene-L2557_RS09085;Name=priC;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=L2557_RS09085 NZ_JAIKUA010000126.1 Protein Homology CDS 9326 9868 . - 0 ID=cds-WP_075671953.1;Parent=gene-L2557_RS09085;Dbxref=GenBank:WP_075671953.1;Name=WP_075671953.1;gbkey=CDS;gene=priC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247249.1;locus_tag=L2557_RS09085;product=primosomal replication protein PriC;protein_id=WP_075671953.1;transl_table=11 NZ_JAIKUA010000126.1 RefSeq gene 10006 10557 . + . ID=gene-L2557_RS09090;Name=apt;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=L2557_RS09090 NZ_JAIKUA010000126.1 Protein Homology CDS 10006 10557 . + 0 ID=cds-WP_036911661.1;Parent=gene-L2557_RS09090;Dbxref=GenBank:WP_036911661.1;Name=WP_036911661.1;Ontology_term=GO:0006168,GO:0003999;gbkey=CDS;gene=apt;go_function=adenine phosphoribosyltransferase activity|0003999||IEA;go_process=adenine salvage|0006168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811787.1;locus_tag=L2557_RS09090;product=adenine phosphoribosyltransferase;protein_id=WP_036911661.1;transl_table=11 NZ_JAIKUA010000126.1 RefSeq gene 10811 12784 . + . ID=gene-L2557_RS09095;Name=dnaX;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=L2557_RS09095 NZ_JAIKUA010000126.1 Protein Homology CDS 10811 12784 . + 0 ID=cds-WP_235410002.1;Parent=gene-L2557_RS09095;Dbxref=GenBank:WP_235410002.1;Name=WP_235410002.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0005524,GO:0009360;gbkey=CDS;gene=dnaX;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247250.1;locus_tag=L2557_RS09095;product=DNA polymerase III subunit gamma/tau;protein_id=WP_235410002.1;transl_table=11 NZ_JAIKUA010000126.1 RefSeq gene 12839 13168 . + . ID=gene-L2557_RS09100;Name=L2557_RS09100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09100 NZ_JAIKUA010000126.1 Protein Homology CDS 12839 13168 . + 0 ID=cds-WP_023580840.1;Parent=gene-L2557_RS09100;Dbxref=GenBank:WP_023580840.1;Name=WP_023580840.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001364632.1;locus_tag=L2557_RS09100;product=YbaB/EbfC family nucleoid-associated protein;protein_id=WP_023580840.1;transl_table=11 NZ_JAIKUA010000126.1 RefSeq gene 13168 13773 . + . ID=gene-L2557_RS09105;Name=recR;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=L2557_RS09105 NZ_JAIKUA010000126.1 Protein Homology CDS 13168 13773 . + 0 ID=cds-WP_075671949.1;Parent=gene-L2557_RS09105;Dbxref=GenBank:WP_075671949.1;Name=WP_075671949.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677,GO:0046872;gbkey=CDS;gene=recR;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013024921.1;locus_tag=L2557_RS09105;product=recombination mediator RecR;protein_id=WP_075671949.1;transl_table=11 NZ_JAIKUA010000126.1 RefSeq gene 14008 14676 . + . ID=gene-L2557_RS09110;Name=L2557_RS09110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09110 NZ_JAIKUA010000126.1 Protein Homology CDS 14008 14676 . + 0 ID=cds-WP_223672521.1;Parent=gene-L2557_RS09110;Dbxref=GenBank:WP_223672521.1;Name=WP_223672521.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004126649.1;locus_tag=L2557_RS09110;product=vWA domain-containing protein;protein_id=WP_223672521.1;transl_table=11 NZ_JAIKUA010000126.1 RefSeq gene 14676 15431 . + . ID=gene-L2557_RS09115;Name=L2557_RS09115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09115 NZ_JAIKUA010000126.1 Protein Homology CDS 14676 15431 . + 0 ID=cds-WP_099659961.1;Parent=gene-L2557_RS09115;Dbxref=GenBank:WP_099659961.1;Name=WP_099659961.1;Ontology_term=GO:0004722;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA;inference=COORDINATES: protein motif:HMM:NF025053.6;locus_tag=L2557_RS09115;product=PP2C family serine/threonine-protein phosphatase;protein_id=WP_099659961.1;transl_table=11 NZ_JAIKUA010000126.1 RefSeq gene 15425 16900 . + . ID=gene-L2557_RS09120;Name=L2557_RS09120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09120 NZ_JAIKUA010000126.1 GeneMarkS-2+ CDS 15425 16900 . + 0 ID=cds-WP_075671945.1;Parent=gene-L2557_RS09120;Dbxref=GenBank:WP_075671945.1;Name=WP_075671945.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS09120;product=hypothetical protein;protein_id=WP_075671945.1;transl_table=11 NZ_JAIKUA010000126.1 RefSeq gene 16916 19423 . + . ID=gene-L2557_RS09125;Name=L2557_RS09125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09125 NZ_JAIKUA010000126.1 Protein Homology CDS 16916 19423 . + 0 ID=cds-WP_099659960.1;Parent=gene-L2557_RS09125;Dbxref=GenBank:WP_099659960.1;Name=WP_099659960.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:TIGR01352.1;locus_tag=L2557_RS09125;product=TonB family protein;protein_id=WP_099659960.1;transl_table=11 NZ_JAIKUA010000126.1 RefSeq gene 19760 21910 . + . ID=gene-L2557_RS09130;Name=L2557_RS09130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09130 NZ_JAIKUA010000126.1 Protein Homology CDS 19760 21910 . + 0 ID=cds-WP_075671941.1;Parent=gene-L2557_RS09130;Dbxref=GenBank:WP_075671941.1;Name=WP_075671941.1;Ontology_term=GO:0009267,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=cellular response to starvation|0009267||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245058.1;locus_tag=L2557_RS09130;product=carbon starvation CstA family protein;protein_id=WP_075671941.1;transl_table=11 NZ_JAIKUA010000126.1 RefSeq gene 21972 22178 . + . ID=gene-L2557_RS09135;Name=L2557_RS09135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09135 NZ_JAIKUA010000126.1 Protein Homology CDS 21972 22178 . + 0 ID=cds-WP_004245057.1;Parent=gene-L2557_RS09135;Dbxref=GenBank:WP_004245057.1;Name=WP_004245057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313339.1;locus_tag=L2557_RS09135;product=YbdD/YjiX family protein;protein_id=WP_004245057.1;transl_table=11 NZ_JAIKUA010000126.1 RefSeq gene 22201 23181 . + . ID=gene-L2557_RS09140;Name=yjiA;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=L2557_RS09140 NZ_JAIKUA010000126.1 Protein Homology CDS 22201 23181 . + 0 ID=cds-WP_075671939.1;Parent=gene-L2557_RS09140;Dbxref=GenBank:WP_075671939.1;Name=WP_075671939.1;gbkey=CDS;gene=yjiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247252.1;locus_tag=L2557_RS09140;product=GTPase;protein_id=WP_075671939.1;transl_table=11 NZ_JAIKUA010000126.1 RefSeq gene 23375 24697 . - . ID=gene-L2557_RS09145;Name=L2557_RS09145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09145 NZ_JAIKUA010000126.1 Protein Homology CDS 23375 24697 . - 0 ID=cds-WP_075671937.1;Parent=gene-L2557_RS09145;Dbxref=GenBank:WP_075671937.1;Name=WP_075671937.1;Ontology_term=GO:0051539,GO:0080146;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,L-cysteine desulfhydrase activity|0080146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367486.1;locus_tag=L2557_RS09145;product=L-cysteine desulfidase family protein;protein_id=WP_075671937.1;transl_table=11 ##sequence-region NZ_JAIKUA010000127.1 1 17078 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000127.1 RefSeq region 1 17078 . + . ID=NZ_JAIKUA010000127.1:1..17078;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000127.1 RefSeq gene 169 732 . + . ID=gene-L2557_RS09150;Name=L2557_RS09150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09150 NZ_JAIKUA010000127.1 Protein Homology CDS 169 732 . + 0 ID=cds-WP_075672887.1;Parent=gene-L2557_RS09150;Dbxref=GenBank:WP_075672887.1;Name=WP_075672887.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004104458.1;locus_tag=L2557_RS09150;product=fimbrial protein;protein_id=WP_075672887.1;transl_table=11 NZ_JAIKUA010000127.1 RefSeq gene 797 1516 . + . ID=gene-L2557_RS09155;Name=L2557_RS09155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09155 NZ_JAIKUA010000127.1 Protein Homology CDS 797 1516 . + 0 ID=cds-WP_075672886.1;Parent=gene-L2557_RS09155;Dbxref=GenBank:WP_075672886.1;Name=WP_075672886.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004958684.1;locus_tag=L2557_RS09155;product=fimbrial biogenesis chaperone;protein_id=WP_075672886.1;transl_table=11 NZ_JAIKUA010000127.1 RefSeq gene 1555 4200 . + . ID=gene-L2557_RS09160;Name=L2557_RS09160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09160 NZ_JAIKUA010000127.1 Protein Homology CDS 1555 4200 . + 0 ID=cds-WP_191901554.1;Parent=gene-L2557_RS09160;Dbxref=GenBank:WP_191901554.1;Name=WP_191901554.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: protein motif:HMM:NF012786.6;locus_tag=L2557_RS09160;product=fimbria/pilus outer membrane usher protein;protein_id=WP_191901554.1;transl_table=11 NZ_JAIKUA010000127.1 RefSeq gene 4204 5364 . + . ID=gene-L2557_RS09165;Name=L2557_RS09165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09165 NZ_JAIKUA010000127.1 Protein Homology CDS 4204 5364 . + 0 ID=cds-WP_223673867.1;Parent=gene-L2557_RS09165;Dbxref=GenBank:WP_223673867.1;Name=WP_223673867.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF012635.6;locus_tag=L2557_RS09165;product=fimbrial protein;protein_id=WP_223673867.1;transl_table=11 NZ_JAIKUA010000127.1 RefSeq gene 5580 6260 . + . ID=gene-L2557_RS09170;Name=L2557_RS09170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09170 NZ_JAIKUA010000127.1 Protein Homology CDS 5580 6260 . + 0 ID=cds-WP_075672884.1;Parent=gene-L2557_RS09170;Dbxref=GenBank:WP_075672884.1;Name=WP_075672884.1;Ontology_term=GO:0016311,GO:0016791,GO:0046872;gbkey=CDS;go_function=phosphatase activity|0016791||IEA,metal ion binding|0046872||IEA;go_process=dephosphorylation|0016311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368337.1;locus_tag=L2557_RS09170;product=HAD family hydrolase;protein_id=WP_075672884.1;transl_table=11 NZ_JAIKUA010000127.1 RefSeq gene 6326 6901 . - . ID=gene-L2557_RS09175;Name=L2557_RS09175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09175 NZ_JAIKUA010000127.1 Protein Homology CDS 6326 6901 . - 0 ID=cds-WP_075672883.1;Parent=gene-L2557_RS09175;Dbxref=GenBank:WP_075672883.1;Name=WP_075672883.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309383.1;locus_tag=L2557_RS09175;product=TerD family protein;protein_id=WP_075672883.1;transl_table=11 NZ_JAIKUA010000127.1 RefSeq gene 6981 7559 . - . ID=gene-L2557_RS09180;Name=L2557_RS09180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09180 NZ_JAIKUA010000127.1 Protein Homology CDS 6981 7559 . - 0 ID=cds-WP_072070083.1;Parent=gene-L2557_RS09180;Dbxref=GenBank:WP_072070083.1;Name=WP_072070083.1;Ontology_term=GO:0006950;gbkey=CDS;go_process=response to stress|0006950||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309382.1;locus_tag=L2557_RS09180;product=TerD family protein;protein_id=WP_072070083.1;transl_table=11 NZ_JAIKUA010000127.1 RefSeq gene 7613 8653 . - . ID=gene-L2557_RS09185;Name=L2557_RS09185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09185 NZ_JAIKUA010000127.1 Protein Homology CDS 7613 8653 . - 0 ID=cds-WP_075672881.1;Parent=gene-L2557_RS09185;Dbxref=GenBank:WP_075672881.1;Name=WP_075672881.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001562622.1;locus_tag=L2557_RS09185;product=TerC/Alx family metal homeostasis membrane protein;protein_id=WP_075672881.1;transl_table=11 NZ_JAIKUA010000127.1 RefSeq gene 8685 9140 . - . ID=gene-L2557_RS09190;Name=L2557_RS09190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09190 NZ_JAIKUA010000127.1 Protein Homology CDS 8685 9140 . - 0 ID=cds-WP_075672880.1;Parent=gene-L2557_RS09190;Dbxref=GenBank:WP_075672880.1;Name=WP_075672880.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309380.1;locus_tag=L2557_RS09190;product=tellurite resistance TerB family protein;protein_id=WP_075672880.1;transl_table=11 NZ_JAIKUA010000127.1 RefSeq gene 9166 10344 . - . ID=gene-L2557_RS09195;Name=L2557_RS09195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09195 NZ_JAIKUA010000127.1 Protein Homology CDS 9166 10344 . - 0 ID=cds-WP_075672879.1;Parent=gene-L2557_RS09195;Dbxref=GenBank:WP_075672879.1;Name=WP_075672879.1;Ontology_term=GO:0046690;gbkey=CDS;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249444.1;locus_tag=L2557_RS09195;product=TerD family protein;protein_id=WP_075672879.1;transl_table=11 NZ_JAIKUA010000127.1 RefSeq gene 10345 10929 . - . ID=gene-L2557_RS09200;Name=L2557_RS09200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09200 NZ_JAIKUA010000127.1 Protein Homology CDS 10345 10929 . - 0 ID=cds-WP_072064329.1;Parent=gene-L2557_RS09200;Dbxref=GenBank:WP_072064329.1;Name=WP_072064329.1;Ontology_term=GO:0050896;gbkey=CDS;go_process=response to stimulus|0050896||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309378.1;locus_tag=L2557_RS09200;product=TerD family protein;protein_id=WP_072064329.1;transl_table=11 NZ_JAIKUA010000127.1 RefSeq gene 11253 12320 . + . ID=gene-L2557_RS09205;Name=L2557_RS09205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09205 NZ_JAIKUA010000127.1 Protein Homology CDS 11253 12320 . + 0 ID=cds-WP_164530688.1;Parent=gene-L2557_RS09205;Dbxref=GenBank:WP_164530688.1;Name=WP_164530688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926814.1;locus_tag=L2557_RS09205;product=ATP-grasp domain-containing protein;protein_id=WP_164530688.1;transl_table=11 NZ_JAIKUA010000127.1 RefSeq gene 12323 13471 . + . ID=gene-L2557_RS09210;Name=L2557_RS09210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09210 NZ_JAIKUA010000127.1 Protein Homology CDS 12323 13471 . + 0 ID=cds-WP_075672877.1;Parent=gene-L2557_RS09210;Dbxref=GenBank:WP_075672877.1;Name=WP_075672877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368339.1;locus_tag=L2557_RS09210;product=phosphoribosyltransferase domain-containing protein;protein_id=WP_075672877.1;transl_table=11 NZ_JAIKUA010000127.1 RefSeq gene 13464 14234 . + . ID=gene-L2557_RS09215;Name=L2557_RS09215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09215 NZ_JAIKUA010000127.1 Protein Homology CDS 13464 14234 . + 0 ID=cds-WP_075672876.1;Parent=gene-L2557_RS09215;Dbxref=GenBank:WP_075672876.1;Name=WP_075672876.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249442.1;locus_tag=L2557_RS09215;product=HAD family hydrolase;protein_id=WP_075672876.1;transl_table=11 NZ_JAIKUA010000127.1 RefSeq gene 14237 15313 . + . ID=gene-L2557_RS09220;Name=L2557_RS09220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09220 NZ_JAIKUA010000127.1 Protein Homology CDS 14237 15313 . + 0 ID=cds-WP_099660225.1;Parent=gene-L2557_RS09220;Dbxref=GenBank:WP_099660225.1;Name=WP_099660225.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249441.1;locus_tag=L2557_RS09220;product=cysteine protease StiP family protein;protein_id=WP_099660225.1;transl_table=11 NZ_JAIKUA010000127.1 RefSeq gene 15313 16257 . + . ID=gene-L2557_RS09225;Name=L2557_RS09225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09225 NZ_JAIKUA010000127.1 Protein Homology CDS 15313 16257 . + 0 ID=cds-WP_099660226.1;Parent=gene-L2557_RS09225;Dbxref=GenBank:WP_099660226.1;Name=WP_099660226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536055.1;locus_tag=L2557_RS09225;product=HpcH/HpaI aldolase/citrate lyase family protein;protein_id=WP_099660226.1;transl_table=11 NZ_JAIKUA010000127.1 RefSeq gene 16543 17034 . + . ID=gene-L2557_RS09230;Name=L2557_RS09230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09230 NZ_JAIKUA010000127.1 Protein Homology CDS 16543 17034 . + 0 ID=cds-WP_075672873.1;Parent=gene-L2557_RS09230;Dbxref=GenBank:WP_075672873.1;Name=WP_075672873.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536056.1;locus_tag=L2557_RS09230;product=tellurium resistance protein TerW;protein_id=WP_075672873.1;transl_table=11 ##sequence-region NZ_JAIKUA010000128.1 1 1961 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000128.1 RefSeq region 1 1961 . + . ID=NZ_JAIKUA010000128.1:1..1961;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000128.1 RefSeq gene 193 1611 . - . ID=gene-L2557_RS09235;Name=gltX;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=L2557_RS09235 NZ_JAIKUA010000128.1 Protein Homology CDS 193 1611 . - 0 ID=cds-WP_075670532.1;Parent=gene-L2557_RS09235;Dbxref=GenBank:WP_075670532.1;Name=WP_075670532.1;Ontology_term=GO:0006424,GO:0000166,GO:0004818,GO:0005524;gbkey=CDS;gene=gltX;go_function=nucleotide binding|0000166||IEA,glutamate-tRNA ligase activity|0004818||IEA,ATP binding|0005524||IEA;go_process=glutamyl-tRNA aminoacylation|0006424||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243784.1;locus_tag=L2557_RS09235;product=glutamate--tRNA ligase;protein_id=WP_075670532.1;transl_table=11 ##sequence-region NZ_JAIKUA010000129.1 1 10406 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000129.1 RefSeq region 1 10406 . + . ID=NZ_JAIKUA010000129.1:1..10406;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000129.1 RefSeq gene 417 1646 . + . ID=gene-L2557_RS09240;Name=ampH;gbkey=Gene;gene=ampH;gene_biotype=protein_coding;locus_tag=L2557_RS09240 NZ_JAIKUA010000129.1 Protein Homology CDS 417 1646 . + 0 ID=cds-WP_156732997.1;Parent=gene-L2557_RS09240;Dbxref=GenBank:WP_156732997.1;Name=WP_156732997.1;gbkey=CDS;gene=ampH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628755.1;locus_tag=L2557_RS09240;product=D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH;protein_id=WP_156732997.1;transl_table=11 NZ_JAIKUA010000129.1 RefSeq gene 1715 2794 . - . ID=gene-L2557_RS09245;Name=lptG;gbkey=Gene;gene=lptG;gene_biotype=protein_coding;locus_tag=L2557_RS09245 NZ_JAIKUA010000129.1 Protein Homology CDS 1715 2794 . - 0 ID=cds-WP_075672202.1;Parent=gene-L2557_RS09245;Dbxref=GenBank:WP_075672202.1;Name=WP_075672202.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptG;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246180.1;locus_tag=L2557_RS09245;product=LPS export ABC transporter permease LptG;protein_id=WP_075672202.1;transl_table=11 NZ_JAIKUA010000129.1 RefSeq gene 2794 3891 . - . ID=gene-L2557_RS09250;Name=lptF;gbkey=Gene;gene=lptF;gene_biotype=protein_coding;locus_tag=L2557_RS09250 NZ_JAIKUA010000129.1 Protein Homology CDS 2794 3891 . - 0 ID=cds-WP_075672200.1;Parent=gene-L2557_RS09250;Dbxref=GenBank:WP_075672200.1;Name=WP_075672200.1;Ontology_term=GO:0055085,GO:0015221,GO:0043190;gbkey=CDS;gene=lptF;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=lipopolysaccharide transmembrane transporter activity|0015221||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249580.1;locus_tag=L2557_RS09250;product=LPS export ABC transporter permease LptF;protein_id=WP_075672200.1;transl_table=11 NZ_JAIKUA010000129.1 RefSeq gene 4178 5686 . + . ID=gene-L2557_RS09255;Name=pepA;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=L2557_RS09255 NZ_JAIKUA010000129.1 Protein Homology CDS 4178 5686 . + 0 ID=cds-WP_075672198.1;Parent=gene-L2557_RS09255;Dbxref=GenBank:WP_075672198.1;Name=WP_075672198.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepA;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463337.1;locus_tag=L2557_RS09255;product=leucyl aminopeptidase;protein_id=WP_075672198.1;transl_table=11 NZ_JAIKUA010000129.1 RefSeq gene 5792 6241 . + . ID=gene-L2557_RS09260;Name=L2557_RS09260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09260 NZ_JAIKUA010000129.1 Protein Homology CDS 5792 6241 . + 0 ID=cds-WP_023583544.1;Parent=gene-L2557_RS09260;Dbxref=GenBank:WP_023583544.1;Name=WP_023583544.1;Ontology_term=GO:0006260,GO:0006261,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA,DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246185.1;locus_tag=L2557_RS09260;product=DNA polymerase III subunit chi;protein_id=WP_023583544.1;transl_table=11 NZ_JAIKUA010000129.1 RefSeq gene 6255 9143 . + . ID=gene-L2557_RS09265;Name=L2557_RS09265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09265 NZ_JAIKUA010000129.1 Protein Homology CDS 6255 9143 . + 0 ID=cds-WP_099660263.1;Parent=gene-L2557_RS09265;Dbxref=GenBank:WP_099660263.1;Name=WP_099660263.1;Ontology_term=GO:0006438,GO:0000166,GO:0004812,GO:0004832,GO:0005524;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,aminoacyl-tRNA ligase activity|0004812||IEA,valine-tRNA ligase activity|0004832||IEA,ATP binding|0005524||IEA;go_process=valyl-tRNA aminoacylation|0006438||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249581.1;locus_tag=L2557_RS09265;product=valine--tRNA ligase;protein_id=WP_099660263.1;transl_table=11 NZ_JAIKUA010000129.1 RefSeq gene 9518 10027 . + . ID=gene-L2557_RS09270;Name=L2557_RS09270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09270 NZ_JAIKUA010000129.1 Protein Homology CDS 9518 10027 . + 0 ID=cds-WP_075672317.1;Parent=gene-L2557_RS09270;Dbxref=GenBank:WP_075672317.1;Name=WP_075672317.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012987036.1;locus_tag=L2557_RS09270;product=GNAT family N-acetyltransferase;protein_id=WP_075672317.1;transl_table=11 ##sequence-region NZ_JAIKUA010000013.1 1 21188 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000013.1 RefSeq region 1 21188 . + . ID=NZ_JAIKUA010000013.1:1..21188;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000013.1 RefSeq gene 62 1237 . + . ID=gene-L2557_RS01040;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=L2557_RS01040 NZ_JAIKUA010000013.1 Protein Homology CDS 62 1237 . + 0 ID=cds-WP_075672764.1;Parent=gene-L2557_RS01040;Dbxref=GenBank:WP_075672764.1;Name=WP_075672764.1;Ontology_term=GO:0009086,GO:0047804;gbkey=CDS;gene=metC;go_function=cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628459.1;locus_tag=L2557_RS01040;product=cystathionine beta-lyase;protein_id=WP_075672764.1;transl_table=11 NZ_JAIKUA010000013.1 RefSeq gene 1272 2639 . + . ID=gene-L2557_RS01045;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=L2557_RS01045 NZ_JAIKUA010000013.1 Protein Homology CDS 1272 2639 . + 0 ID=cds-WP_235409744.1;Parent=gene-L2557_RS01045;Dbxref=GenBank:WP_235409744.1;Name=WP_235409744.1;Ontology_term=GO:0015740,GO:0015556,GO:0016020;gbkey=CDS;gene=dcuC;go_component=membrane|0016020||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252125.1;locus_tag=L2557_RS01045;product=C4-dicarboxylate transporter DcuC;protein_id=WP_235409744.1;transl_table=11 NZ_JAIKUA010000013.1 RefSeq gene 2922 3110 . + . ID=gene-L2557_RS01050;Name=L2557_RS01050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01050 NZ_JAIKUA010000013.1 Protein Homology CDS 2922 3110 . + 0 ID=cds-WP_223672623.1;Parent=gene-L2557_RS01050;Dbxref=GenBank:WP_223672623.1;Name=WP_223672623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537572.1;locus_tag=L2557_RS01050;product=hypothetical protein;protein_id=WP_223672623.1;transl_table=11 NZ_JAIKUA010000013.1 RefSeq gene 3124 3966 . + . ID=gene-L2557_RS01055;Name=sseA;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=L2557_RS01055 NZ_JAIKUA010000013.1 Protein Homology CDS 3124 3966 . + 0 ID=cds-WP_223673704.1;Parent=gene-L2557_RS01055;Dbxref=GenBank:WP_223673704.1;Name=WP_223673704.1;Ontology_term=GO:0004792;gbkey=CDS;gene=sseA;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537573.1;locus_tag=L2557_RS01055;product=3-mercaptopyruvate sulfurtransferase;protein_id=WP_223673704.1;transl_table=11 NZ_JAIKUA010000013.1 RefSeq gene 4043 4291 . - . ID=gene-L2557_RS01060;Name=L2557_RS01060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01060 NZ_JAIKUA010000013.1 Protein Homology CDS 4043 4291 . - 0 ID=cds-WP_075672760.1;Parent=gene-L2557_RS01060;Dbxref=GenBank:WP_075672760.1;Name=WP_075672760.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244486.1;locus_tag=L2557_RS01060;product=GlsB/YeaQ/YmgE family stress response membrane protein;protein_id=WP_075672760.1;transl_table=11 NZ_JAIKUA010000013.1 RefSeq gene 4485 5417 . - . ID=gene-L2557_RS01065;Name=dusC;gbkey=Gene;gene=dusC;gene_biotype=protein_coding;locus_tag=L2557_RS01065 NZ_JAIKUA010000013.1 Protein Homology CDS 4485 5417 . - 0 ID=cds-WP_099659806.1;Parent=gene-L2557_RS01065;Dbxref=GenBank:WP_099659806.1;Name=WP_099659806.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusC;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827744.1;locus_tag=L2557_RS01065;product=tRNA dihydrouridine(16) synthase DusC;protein_id=WP_099659806.1;transl_table=11 NZ_JAIKUA010000013.1 RefSeq gene 5429 6853 . - . ID=gene-L2557_RS01070;Name=rhlE;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=L2557_RS01070 NZ_JAIKUA010000013.1 Protein Homology CDS 5429 6853 . - 0 ID=cds-WP_075672758.1;Parent=gene-L2557_RS01070;Dbxref=GenBank:WP_075672758.1;Name=WP_075672758.1;Ontology_term=GO:0003724;gbkey=CDS;gene=rhlE;go_function=RNA helicase activity|0003724||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367680.1;locus_tag=L2557_RS01070;product=ATP-dependent RNA helicase RhlE;protein_id=WP_075672758.1;transl_table=11 NZ_JAIKUA010000013.1 RefSeq gene 7226 7924 . + . ID=gene-L2557_RS01075;Name=L2557_RS01075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01075 NZ_JAIKUA010000013.1 Protein Homology CDS 7226 7924 . + 0 ID=cds-WP_099659807.1;Parent=gene-L2557_RS01075;Dbxref=GenBank:WP_099659807.1;Name=WP_099659807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244482.1;locus_tag=L2557_RS01075;product=CerR family C-terminal domain-containing protein;protein_id=WP_099659807.1;transl_table=11 NZ_JAIKUA010000013.1 RefSeq gene 7936 8922 . + . ID=gene-L2557_RS01080;Name=hlyD;gbkey=Gene;gene=hlyD;gene_biotype=protein_coding;locus_tag=L2557_RS01080 NZ_JAIKUA010000013.1 Protein Homology CDS 7936 8922 . + 0 ID=cds-WP_075672756.1;Parent=gene-L2557_RS01080;Dbxref=GenBank:WP_075672756.1;Name=WP_075672756.1;gbkey=CDS;gene=hlyD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247573.1;locus_tag=L2557_RS01080;product=secretion protein HlyD;protein_id=WP_075672756.1;transl_table=11 NZ_JAIKUA010000013.1 RefSeq gene 8936 10705 . + . ID=gene-L2557_RS01085;Name=L2557_RS01085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01085 NZ_JAIKUA010000013.1 Protein Homology CDS 8936 10705 . + 0 ID=cds-WP_235409745.1;Parent=gene-L2557_RS01085;Dbxref=GenBank:WP_235409745.1;Name=WP_235409745.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247572.1;locus_tag=L2557_RS01085;product=ATP-binding cassette domain-containing protein;protein_id=WP_235409745.1;transl_table=11 NZ_JAIKUA010000013.1 RefSeq gene 10698 11849 . + . ID=gene-L2557_RS01090;Name=L2557_RS01090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01090 NZ_JAIKUA010000013.1 Protein Homology CDS 10698 11849 . + 0 ID=cds-WP_075672754.1;Parent=gene-L2557_RS01090;Dbxref=GenBank:WP_075672754.1;Name=WP_075672754.1;Ontology_term=GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244479.1;locus_tag=L2557_RS01090;product=ABC transporter permease;protein_id=WP_075672754.1;transl_table=11 NZ_JAIKUA010000013.1 RefSeq gene 11863 12972 . + . ID=gene-L2557_RS01095;Name=L2557_RS01095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01095 NZ_JAIKUA010000013.1 Protein Homology CDS 11863 12972 . + 0 ID=cds-WP_099659809.1;Parent=gene-L2557_RS01095;Dbxref=GenBank:WP_099659809.1;Name=WP_099659809.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013367009.1;locus_tag=L2557_RS01095;product=ABC transporter permease;protein_id=WP_099659809.1;transl_table=11 NZ_JAIKUA010000013.1 RefSeq gene 13081 13791 . - . ID=gene-L2557_RS01100;Name=L2557_RS01100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01100 NZ_JAIKUA010000013.1 Protein Homology CDS 13081 13791 . - 0 ID=cds-WP_036938325.1;Parent=gene-L2557_RS01100;Dbxref=GenBank:WP_036938325.1;Name=WP_036938325.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210775.1;locus_tag=L2557_RS01100;product=Bax inhibitor-1/YccA family protein;protein_id=WP_036938325.1;transl_table=11 NZ_JAIKUA010000013.1 RefSeq gene 13986 14447 . - . ID=gene-L2557_RS01105;Name=moaE;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=L2557_RS01105 NZ_JAIKUA010000013.1 Protein Homology CDS 13986 14447 . - 0 ID=cds-WP_075672752.1;Parent=gene-L2557_RS01105;Dbxref=GenBank:WP_075672752.1;Name=WP_075672752.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaE;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244476.1;locus_tag=L2557_RS01105;product=molybdopterin synthase catalytic subunit MoaE;protein_id=WP_075672752.1;transl_table=11 NZ_JAIKUA010000013.1 RefSeq gene 14449 14694 . - . ID=gene-L2557_RS01110;Name=moaD;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=L2557_RS01110 NZ_JAIKUA010000013.1 Protein Homology CDS 14449 14694 . - 0 ID=cds-WP_075672751.1;Parent=gene-L2557_RS01110;Dbxref=GenBank:WP_075672751.1;Name=WP_075672751.1;Ontology_term=GO:0006777;gbkey=CDS;gene=moaD;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210773.1;locus_tag=L2557_RS01110;product=molybdopterin synthase sulfur carrier subunit;protein_id=WP_075672751.1;transl_table=11 NZ_JAIKUA010000013.1 RefSeq gene 14691 15170 . - . ID=gene-L2557_RS01115;Name=moaC;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=L2557_RS01115 NZ_JAIKUA010000013.1 Protein Homology CDS 14691 15170 . - 0 ID=cds-WP_072062889.1;Parent=gene-L2557_RS01115;Dbxref=GenBank:WP_072062889.1;Name=WP_072062889.1;Ontology_term=GO:0006777,GO:0061799;gbkey=CDS;gene=moaC;go_function=cyclic pyranopterin monophosphate synthase activity|0061799||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917841.1;locus_tag=L2557_RS01115;product=cyclic pyranopterin monophosphate synthase MoaC;protein_id=WP_072062889.1;transl_table=11 NZ_JAIKUA010000013.1 RefSeq gene 15210 16190 . - . ID=gene-L2557_RS01120;Name=moaA;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=L2557_RS01120 NZ_JAIKUA010000013.1 Protein Homology CDS 15210 16190 . - 0 ID=cds-WP_099659810.1;Parent=gene-L2557_RS01120;Dbxref=GenBank:WP_099659810.1;Name=WP_099659810.1;Ontology_term=GO:0006777,GO:0046872,GO:0051539;gbkey=CDS;gene=moaA;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657771.1;locus_tag=L2557_RS01120;product=GTP 3'%2C8-cyclase MoaA;protein_id=WP_099659810.1;transl_table=11 NZ_JAIKUA010000013.1 cmsearch riboswitch 16180 16322 . - . ID=id-NZ_JAIKUA010000013.1:16180..16322;Dbxref=RFAM:RF01055;Note=molybdenum cofactor riboswitch;bound_moiety=molybdenum cofactor;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAIKUA010000013.1 RefSeq gene 16602 17540 . + . ID=gene-L2557_RS01125;Name=yvcK;gbkey=Gene;gene=yvcK;gene_biotype=protein_coding;locus_tag=L2557_RS01125 NZ_JAIKUA010000013.1 Protein Homology CDS 16602 17540 . + 0 ID=cds-WP_075672749.1;Parent=gene-L2557_RS01125;Dbxref=GenBank:WP_075672749.1;Name=WP_075672749.1;gbkey=CDS;gene=yvcK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537594.1;locus_tag=L2557_RS01125;product=uridine diphosphate-N-acetylglucosamine-binding protein YvcK;protein_id=WP_075672749.1;transl_table=11 NZ_JAIKUA010000013.1 RefSeq gene 17644 18594 . - . ID=gene-L2557_RS01130;Name=L2557_RS01130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01130 NZ_JAIKUA010000013.1 Protein Homology CDS 17644 18594 . - 0 ID=cds-WP_075672748.1;Parent=gene-L2557_RS01130;Dbxref=GenBank:WP_075672748.1;Name=WP_075672748.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628465.1;locus_tag=L2557_RS01130;product=DUF1266 domain-containing protein;protein_id=WP_075672748.1;transl_table=11 NZ_JAIKUA010000013.1 RefSeq gene 18783 20792 . - . ID=gene-L2557_RS01135;Name=uvrB;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=L2557_RS01135 NZ_JAIKUA010000013.1 Protein Homology CDS 18783 20792 . - 0 ID=cds-WP_075672747.1;Parent=gene-L2557_RS01135;Dbxref=GenBank:WP_075672747.1;Name=WP_075672747.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887,GO:0009380;gbkey=CDS;gene=uvrB;go_component=excinuclease repair complex|0009380||IEA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244467.1;locus_tag=L2557_RS01135;product=excinuclease ABC subunit UvrB;protein_id=WP_075672747.1;transl_table=11 ##sequence-region NZ_JAIKUA010000130.1 1 10092 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000130.1 RefSeq region 1 10092 . + . ID=NZ_JAIKUA010000130.1:1..10092;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000130.1 RefSeq gene 486 1973 . + . ID=gene-L2557_RS09275;Name=dtpB;gbkey=Gene;gene=dtpB;gene_biotype=protein_coding;locus_tag=L2557_RS09275 NZ_JAIKUA010000130.1 Protein Homology CDS 486 1973 . + 0 ID=cds-WP_075673405.1;Parent=gene-L2557_RS09275;Dbxref=GenBank:WP_075673405.1;Name=WP_075673405.1;gbkey=CDS;gene=dtpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534913.1;locus_tag=L2557_RS09275;product=dipeptide/tripeptide permease DtpB;protein_id=WP_075673405.1;transl_table=11 NZ_JAIKUA010000130.1 RefSeq gene 2240 3319 . - . ID=gene-L2557_RS09280;Name=fbaA;gbkey=Gene;gene=fbaA;gene_biotype=protein_coding;locus_tag=L2557_RS09280 NZ_JAIKUA010000130.1 Protein Homology CDS 2240 3319 . - 0 ID=cds-WP_099659923.1;Parent=gene-L2557_RS09280;Dbxref=GenBank:WP_099659923.1;Name=WP_099659923.1;Ontology_term=GO:0005975,GO:0006096,GO:0004332,GO:0008270;gbkey=CDS;gene=fbaA;go_function=fructose-bisphosphate aldolase activity|0004332||IEA,zinc ion binding|0008270||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228720.1;locus_tag=L2557_RS09280;product=class II fructose-bisphosphate aldolase;protein_id=WP_099659923.1;transl_table=11 NZ_JAIKUA010000130.1 RefSeq gene 3383 4546 . - . ID=gene-L2557_RS09285;Name=pgk;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=L2557_RS09285 NZ_JAIKUA010000130.1 Protein Homology CDS 3383 4546 . - 0 ID=cds-WP_075673403.1;Parent=gene-L2557_RS09285;Dbxref=GenBank:WP_075673403.1;Name=WP_075673403.1;gbkey=CDS;gene=pgk;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005761248.1;locus_tag=L2557_RS09285;product=phosphoglycerate kinase;protein_id=WP_075673403.1;transl_table=11 NZ_JAIKUA010000130.1 RefSeq gene 4634 5653 . - . ID=gene-L2557_RS09290;Name=epd;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=L2557_RS09290 NZ_JAIKUA010000130.1 Protein Homology CDS 4634 5653 . - 0 ID=cds-WP_075673402.1;Parent=gene-L2557_RS09290;Dbxref=GenBank:WP_075673402.1;Name=WP_075673402.1;Ontology_term=GO:0042823,GO:0048001,GO:0051287;gbkey=CDS;gene=epd;go_function=erythrose-4-phosphate dehydrogenase activity|0048001||IEA,NAD binding|0051287||IEA;go_process=pyridoxal phosphate biosynthetic process|0042823||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244954.1;locus_tag=L2557_RS09290;product=erythrose-4-phosphate dehydrogenase;protein_id=WP_075673402.1;transl_table=11 NZ_JAIKUA010000130.1 RefSeq gene 5911 7905 . - . ID=gene-L2557_RS09295;Name=tkt;gbkey=Gene;gene=tkt;gene_biotype=protein_coding;locus_tag=L2557_RS09295 NZ_JAIKUA010000130.1 Protein Homology CDS 5911 7905 . - 0 ID=cds-WP_156733073.1;Parent=gene-L2557_RS09295;Dbxref=GenBank:WP_156733073.1;Name=WP_156733073.1;Ontology_term=GO:0004802;gbkey=CDS;gene=tkt;go_function=transketolase activity|0004802||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379005.1;locus_tag=L2557_RS09295;product=transketolase;protein_id=WP_156733073.1;transl_table=11 NZ_JAIKUA010000130.1 RefSeq gene 8464 8922 . - . ID=gene-L2557_RS09300;Name=L2557_RS09300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09300 NZ_JAIKUA010000130.1 GeneMarkS-2+ CDS 8464 8922 . - 0 ID=cds-WP_099659925.1;Parent=gene-L2557_RS09300;Dbxref=GenBank:WP_099659925.1;Name=WP_099659925.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS09300;product=hypothetical protein;protein_id=WP_099659925.1;transl_table=11 NZ_JAIKUA010000130.1 RefSeq gene 9029 9382 . - . ID=gene-L2557_RS09305;Name=L2557_RS09305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09305 NZ_JAIKUA010000130.1 GeneMarkS-2+ CDS 9029 9382 . - 0 ID=cds-WP_075673399.1;Parent=gene-L2557_RS09305;Dbxref=GenBank:WP_075673399.1;Name=WP_075673399.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS09305;product=hypothetical protein;protein_id=WP_075673399.1;transl_table=11 NZ_JAIKUA010000130.1 RefSeq gene 9384 9929 . - . ID=gene-L2557_RS09310;Name=L2557_RS09310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09310 NZ_JAIKUA010000130.1 Protein Homology CDS 9384 9929 . - 0 ID=cds-WP_075673398.1;Parent=gene-L2557_RS09310;Dbxref=GenBank:WP_075673398.1;Name=WP_075673398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012777139.1;locus_tag=L2557_RS09310;product=nuclease;protein_id=WP_075673398.1;transl_table=11 ##sequence-region NZ_JAIKUA010000131.1 1 6883 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000131.1 RefSeq region 1 6883 . + . ID=NZ_JAIKUA010000131.1:1..6883;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000131.1 RefSeq gene 58 972 . - . ID=gene-L2557_RS09315;Name=L2557_RS09315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09315 NZ_JAIKUA010000131.1 Protein Homology CDS 58 972 . - 0 ID=cds-WP_099660635.1;Parent=gene-L2557_RS09315;Dbxref=GenBank:WP_099660635.1;Name=WP_099660635.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF025879.6;locus_tag=L2557_RS09315;product=helix-turn-helix domain-containing protein;protein_id=WP_099660635.1;transl_table=11 NZ_JAIKUA010000131.1 RefSeq gene 1347 1526 . - . ID=gene-L2557_RS09320;Name=L2557_RS09320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09320 NZ_JAIKUA010000131.1 Protein Homology CDS 1347 1526 . - 0 ID=cds-WP_235410003.1;Parent=gene-L2557_RS09320;Dbxref=GenBank:WP_235410003.1;Name=WP_235410003.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243613.1;locus_tag=L2557_RS09320;product=GhoT/OrtT family toxin;protein_id=WP_235410003.1;transl_table=11 NZ_JAIKUA010000131.1 RefSeq gene 2225 2767 . + . ID=gene-L2557_RS09325;Name=L2557_RS09325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09325 NZ_JAIKUA010000131.1 Protein Homology CDS 2225 2767 . + 0 ID=cds-WP_075674189.1;Parent=gene-L2557_RS09325;Dbxref=GenBank:WP_075674189.1;Name=WP_075674189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250729.1;locus_tag=L2557_RS09325;product=DUF924 family protein;protein_id=WP_075674189.1;transl_table=11 NZ_JAIKUA010000131.1 RefSeq gene 2842 3618 . - . ID=gene-L2557_RS09330;Name=L2557_RS09330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09330 NZ_JAIKUA010000131.1 Protein Homology CDS 2842 3618 . - 0 ID=cds-WP_075674188.1;Parent=gene-L2557_RS09330;Dbxref=GenBank:WP_075674188.1;Name=WP_075674188.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192725.1;locus_tag=L2557_RS09330;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_075674188.1;transl_table=11 NZ_JAIKUA010000131.1 RefSeq gene 3622 4239 . - . ID=gene-L2557_RS09335;Name=L2557_RS09335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09335 NZ_JAIKUA010000131.1 Protein Homology CDS 3622 4239 . - 0 ID=cds-WP_023581764.1;Parent=gene-L2557_RS09335;Dbxref=GenBank:WP_023581764.1;Name=WP_023581764.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005183646.1;locus_tag=L2557_RS09335;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_023581764.1;transl_table=11 NZ_JAIKUA010000131.1 RefSeq gene 4251 6683 . - . ID=gene-L2557_RS09340;Name=L2557_RS09340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09340 NZ_JAIKUA010000131.1 Protein Homology CDS 4251 6683 . - 0 ID=cds-WP_075674187.1;Parent=gene-L2557_RS09340;Dbxref=GenBank:WP_075674187.1;Name=WP_075674187.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661396.1;locus_tag=L2557_RS09340;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_075674187.1;transl_table=11 ##sequence-region NZ_JAIKUA010000132.1 1 12210 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000132.1 RefSeq region 1 12210 . + . ID=NZ_JAIKUA010000132.1:1..12210;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000132.1 RefSeq gene 211 1791 . + . ID=gene-L2557_RS09345;Name=gshA;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=L2557_RS09345 NZ_JAIKUA010000132.1 Protein Homology CDS 211 1791 . + 0 ID=cds-WP_075672413.1;Parent=gene-L2557_RS09345;Dbxref=GenBank:WP_075672413.1;Name=WP_075672413.1;Ontology_term=GO:0006750,GO:0004357;gbkey=CDS;gene=gshA;go_function=glutamate-cysteine ligase activity|0004357||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252262.1;locus_tag=L2557_RS09345;product=glutamate--cysteine ligase;protein_id=WP_075672413.1;transl_table=11 NZ_JAIKUA010000132.1 RefSeq gene 1954 2469 . + . ID=gene-L2557_RS09350;Name=luxS;gbkey=Gene;gene=luxS;gene_biotype=protein_coding;locus_tag=L2557_RS09350 NZ_JAIKUA010000132.1 Protein Homology CDS 1954 2469 . + 0 ID=cds-WP_006534759.1;Parent=gene-L2557_RS09350;Dbxref=GenBank:WP_006534759.1;Name=WP_006534759.1;gbkey=CDS;gene=luxS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008458247.1;locus_tag=L2557_RS09350;product=S-ribosylhomocysteine lyase;protein_id=WP_006534759.1;transl_table=11 NZ_JAIKUA010000132.1 RefSeq gene 2663 3412 . + . ID=gene-L2557_RS09355;Name=L2557_RS09355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09355 NZ_JAIKUA010000132.1 GeneMarkS-2+ CDS 2663 3412 . + 0 ID=cds-WP_075672415.1;Parent=gene-L2557_RS09355;Dbxref=GenBank:WP_075672415.1;Name=WP_075672415.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS09355;product=hypothetical protein;protein_id=WP_075672415.1;transl_table=11 NZ_JAIKUA010000132.1 RefSeq gene 3457 4731 . - . ID=gene-L2557_RS09360;Name=L2557_RS09360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09360 NZ_JAIKUA010000132.1 Protein Homology CDS 3457 4731 . - 0 ID=cds-WP_075672417.1;Parent=gene-L2557_RS09360;Dbxref=GenBank:WP_075672417.1;Name=WP_075672417.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247404.1;locus_tag=L2557_RS09360;product=HlyC/CorC family transporter;protein_id=WP_075672417.1;transl_table=11 NZ_JAIKUA010000132.1 RefSeq gene 4767 5567 . - . ID=gene-L2557_RS09365;Name=L2557_RS09365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09365 NZ_JAIKUA010000132.1 Protein Homology CDS 4767 5567 . - 0 ID=cds-WP_069367097.1;Parent=gene-L2557_RS09365;Dbxref=GenBank:WP_069367097.1;Name=WP_069367097.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628347.1;locus_tag=L2557_RS09365;product=cytochrome C assembly family protein;protein_id=WP_069367097.1;transl_table=11 NZ_JAIKUA010000132.1 RefSeq gene 5741 7102 . + . ID=gene-L2557_RS09370;Name=ffh;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=L2557_RS09370 NZ_JAIKUA010000132.1 Protein Homology CDS 5741 7102 . + 0 ID=cds-WP_023580979.1;Parent=gene-L2557_RS09370;Dbxref=GenBank:WP_023580979.1;Name=WP_023580979.1;Ontology_term=GO:0009306,GO:0003924,GO:0005048,GO:0005525,GO:0048501;gbkey=CDS;gene=ffh;go_component=signal recognition particle%2C plasma membrane targeting|0048501||IEA;go_function=GTPase activity|0003924||IEA,signal sequence binding|0005048||IEA,GTP binding|0005525||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130432.1;locus_tag=L2557_RS09370;product=signal recognition particle protein;protein_id=WP_023580979.1;transl_table=11 NZ_JAIKUA010000132.1 RefSeq gene 7240 7488 . + . ID=gene-L2557_RS09375;Name=rpsP;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=L2557_RS09375 NZ_JAIKUA010000132.1 Protein Homology CDS 7240 7488 . + 0 ID=cds-WP_004244772.1;Parent=gene-L2557_RS09375;Dbxref=GenBank:WP_004244772.1;Name=WP_004244772.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsP;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228347.1;locus_tag=L2557_RS09375;product=30S ribosomal protein S16;protein_id=WP_004244772.1;transl_table=11 NZ_JAIKUA010000132.1 RefSeq gene 7507 8052 . + . ID=gene-L2557_RS09380;Name=rimM;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=L2557_RS09380 NZ_JAIKUA010000132.1 Protein Homology CDS 7507 8052 . + 0 ID=cds-WP_006534751.1;Parent=gene-L2557_RS09380;Dbxref=GenBank:WP_006534751.1;Name=WP_006534751.1;Note=Essential for efficient processing of 16S rRNA;Ontology_term=GO:0006364,GO:0043022,GO:0005840;gbkey=CDS;gene=rimM;go_component=ribosome|0005840||IEA;go_function=ribosome binding|0043022||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000043333.1;locus_tag=L2557_RS09380;product=ribosome maturation factor RimM;protein_id=WP_006534751.1;transl_table=11 NZ_JAIKUA010000132.1 RefSeq gene 8091 8843 . + . ID=gene-L2557_RS09385;Name=trmD;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=L2557_RS09385 NZ_JAIKUA010000132.1 Protein Homology CDS 8091 8843 . + 0 ID=cds-WP_006534750.1;Parent=gene-L2557_RS09385;Dbxref=GenBank:WP_006534750.1;Name=WP_006534750.1;Ontology_term=GO:0030488,GO:0052906;gbkey=CDS;gene=trmD;go_function=tRNA (guanine(37)-N1)-methyltransferase activity|0052906||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244770.1;locus_tag=L2557_RS09385;product=tRNA (guanosine(37)-N1)-methyltransferase TrmD;protein_id=WP_006534750.1;transl_table=11 NZ_JAIKUA010000132.1 RefSeq gene 8896 9249 . + . ID=gene-L2557_RS09390;Name=rplS;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=L2557_RS09390 NZ_JAIKUA010000132.1 Protein Homology CDS 8896 9249 . + 0 ID=cds-WP_023580978.1;Parent=gene-L2557_RS09390;Dbxref=GenBank:WP_023580978.1;Name=WP_023580978.1;Ontology_term=GO:0006412,GO:0003735,GO:0000311,GO:0022625;gbkey=CDS;gene=rplS;go_component=plastid large ribosomal subunit|0000311||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264827.1;locus_tag=L2557_RS09390;product=50S ribosomal protein L19;protein_id=WP_023580978.1;transl_table=11 NZ_JAIKUA010000132.1 RefSeq gene 9659 10753 . + . ID=gene-L2557_RS09395;Name=L2557_RS09395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09395 NZ_JAIKUA010000132.1 Protein Homology CDS 9659 10753 . + 0 ID=cds-WP_075672419.1;Parent=gene-L2557_RS09395;Dbxref=GenBank:WP_075672419.1;Name=WP_075672419.1;Ontology_term=GO:0009073,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247405.1;locus_tag=L2557_RS09395;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_075672419.1;transl_table=11 NZ_JAIKUA010000132.1 RefSeq gene 10790 11914 . + . ID=gene-L2557_RS09400;Name=tyrA;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=L2557_RS09400 NZ_JAIKUA010000132.1 Protein Homology CDS 10790 11914 . + 0 ID=cds-WP_075672421.1;Parent=gene-L2557_RS09400;Dbxref=GenBank:WP_075672421.1;Name=WP_075672421.1;Ontology_term=GO:0006571,GO:0046417,GO:0004106,GO:0004665,GO:0008977;gbkey=CDS;gene=tyrA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydrogenase (NADP+) activity|0004665||IEA,prephenate dehydrogenase (NAD+) activity|0008977||IEA;go_process=L-tyrosine biosynthetic process|0006571||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244767.1;locus_tag=L2557_RS09400;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=WP_075672421.1;transl_table=11 NZ_JAIKUA010000132.1 RefSeq gene 11996 12172 . - . ID=gene-L2557_RS09405;Name=L2557_RS09405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09405 NZ_JAIKUA010000132.1 GeneMarkS-2+ CDS 11996 12172 . - 0 ID=cds-WP_156733089.1;Parent=gene-L2557_RS09405;Dbxref=GenBank:WP_156733089.1;Name=WP_156733089.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS09405;product=hypothetical protein;protein_id=WP_156733089.1;transl_table=11 ##sequence-region NZ_JAIKUA010000133.1 1 12877 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000133.1 RefSeq region 1 12877 . + . ID=NZ_JAIKUA010000133.1:1..12877;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000133.1 RefSeq gene 442 1914 . - . ID=gene-L2557_RS09410;Name=mltF;gbkey=Gene;gene=mltF;gene_biotype=protein_coding;locus_tag=L2557_RS09410 NZ_JAIKUA010000133.1 Protein Homology CDS 442 1914 . - 0 ID=cds-WP_075670448.1;Parent=gene-L2557_RS09410;Dbxref=GenBank:WP_075670448.1;Name=WP_075670448.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltF;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533474.1;locus_tag=L2557_RS09410;product=membrane-bound lytic murein transglycosylase MltF;protein_id=WP_075670448.1;transl_table=11 NZ_JAIKUA010000133.1 RefSeq gene 2179 6069 . + . ID=gene-L2557_RS09415;Name=purL;gbkey=Gene;gene=purL;gene_biotype=protein_coding;gene_synonym=purI;locus_tag=L2557_RS09415 NZ_JAIKUA010000133.1 Protein Homology CDS 2179 6069 . + 0 ID=cds-WP_099659374.1;Parent=gene-L2557_RS09415;Dbxref=GenBank:WP_099659374.1;Name=WP_099659374.1;Ontology_term=GO:0004642;gbkey=CDS;gene=purL;go_function=phosphoribosylformylglycinamidine synthase activity|0004642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248447.1;locus_tag=L2557_RS09415;product=phosphoribosylformylglycinamidine synthase;protein_id=WP_099659374.1;transl_table=11 NZ_JAIKUA010000133.1 RefSeq gene 6761 8209 . + . ID=gene-L2557_RS09420;Name=L2557_RS09420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09420 NZ_JAIKUA010000133.1 Protein Homology CDS 6761 8209 . + 0 ID=cds-WP_075670452.1;Parent=gene-L2557_RS09420;Dbxref=GenBank:WP_075670452.1;Name=WP_075670452.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243869.1;locus_tag=L2557_RS09420;product=sensor histidine kinase;protein_id=WP_075670452.1;transl_table=11 NZ_JAIKUA010000133.1 RefSeq gene 8209 9264 . + . ID=gene-L2557_RS09425;Name=qseG;gbkey=Gene;gene=qseG;gene_biotype=protein_coding;locus_tag=L2557_RS09425 NZ_JAIKUA010000133.1 Protein Homology CDS 8209 9264 . + 0 ID=cds-WP_075670454.1;Parent=gene-L2557_RS09425;Dbxref=GenBank:WP_075670454.1;Name=WP_075670454.1;gbkey=CDS;gene=qseG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368133.1;locus_tag=L2557_RS09425;product=two-component system QseEF-associated lipoprotein QseG;protein_id=WP_075670454.1;transl_table=11 NZ_JAIKUA010000133.1 RefSeq gene 9276 10613 . + . ID=gene-L2557_RS09430;Name=glrR;gbkey=Gene;gene=glrR;gene_biotype=protein_coding;locus_tag=L2557_RS09430 NZ_JAIKUA010000133.1 Protein Homology CDS 9276 10613 . + 0 ID=cds-WP_075670456.1;Parent=gene-L2557_RS09430;Dbxref=GenBank:WP_075670456.1;Name=WP_075670456.1;Ontology_term=GO:0000160,GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;gene=glrR;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002216116.1;locus_tag=L2557_RS09430;product=two-component system response regulator GlrR;protein_id=WP_075670456.1;transl_table=11 NZ_JAIKUA010000133.1 RefSeq gene 10687 12303 . + . ID=gene-L2557_RS09435;Name=L2557_RS09435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09435 NZ_JAIKUA010000133.1 Protein Homology CDS 10687 12303 . + 0 ID=cds-WP_075670458.1;Parent=gene-L2557_RS09435;Dbxref=GenBank:WP_075670458.1;Name=WP_075670458.1;Ontology_term=GO:0009435,GO:0003952,GO:0005524;gbkey=CDS;go_function=NAD+ synthase (glutamine-hydrolyzing) activity|0003952||IEA,ATP binding|0005524||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211555.1;locus_tag=L2557_RS09435;product=NAD+ synthase;protein_id=WP_075670458.1;transl_table=11 NZ_JAIKUA010000133.1 RefSeq gene 12319 12657 . + . ID=gene-L2557_RS09440;Name=glnB;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=L2557_RS09440 NZ_JAIKUA010000133.1 Protein Homology CDS 12319 12657 . + 0 ID=cds-WP_075670460.1;Parent=gene-L2557_RS09440;Dbxref=GenBank:WP_075670460.1;Name=WP_075670460.1;gbkey=CDS;gene=glnB;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311446.1;locus_tag=L2557_RS09440;product=nitrogen regulatory protein P-II;protein_id=WP_075670460.1;transl_table=11 ##sequence-region NZ_JAIKUA010000134.1 1 7169 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000134.1 RefSeq region 1 7169 . + . ID=NZ_JAIKUA010000134.1:1..7169;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000134.1 RefSeq gene 262 858 . - . ID=gene-L2557_RS09445;Name=L2557_RS09445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09445 NZ_JAIKUA010000134.1 Protein Homology CDS 262 858 . - 0 ID=cds-WP_023581977.1;Parent=gene-L2557_RS09445;Dbxref=GenBank:WP_023581977.1;Name=WP_023581977.1;Ontology_term=GO:0004797,GO:0005524;gbkey=CDS;go_function=thymidine kinase activity|0004797||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536430.1;locus_tag=L2557_RS09445;product=thymidine kinase;protein_id=WP_023581977.1;transl_table=11 NZ_JAIKUA010000134.1 RefSeq gene 1368 1772 . + . ID=gene-L2557_RS09450;Name=hns;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=L2557_RS09450 NZ_JAIKUA010000134.1 Protein Homology CDS 1368 1772 . + 0 ID=cds-WP_075673958.1;Parent=gene-L2557_RS09450;Dbxref=GenBank:WP_075673958.1;Name=WP_075673958.1;Ontology_term=GO:0071824,GO:0003677;gbkey=CDS;gene=hns;go_function=DNA binding|0003677||IEA;go_process=protein-DNA complex organization|0071824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243249.1;locus_tag=L2557_RS09450;product=histone-like nucleoid-structuring protein H-NS;protein_id=WP_075673958.1;transl_table=11 NZ_JAIKUA010000134.1 RefSeq gene 2004 3011 . - . ID=gene-L2557_RS09455;Name=L2557_RS09455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09455 NZ_JAIKUA010000134.1 Protein Homology CDS 2004 3011 . - 0 ID=cds-WP_075673963.1;Parent=gene-L2557_RS09455;Dbxref=GenBank:WP_075673963.1;Name=WP_075673963.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368012.1;locus_tag=L2557_RS09455;product=NAD-dependent epimerase;protein_id=WP_075673963.1;transl_table=11 NZ_JAIKUA010000134.1 RefSeq gene 3268 4176 . - . ID=gene-L2557_RS09460;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=L2557_RS09460 NZ_JAIKUA010000134.1 Protein Homology CDS 3268 4176 . - 0 ID=cds-WP_075673959.1;Parent=gene-L2557_RS09460;Dbxref=GenBank:WP_075673959.1;Name=WP_075673959.1;gbkey=CDS;gene=galU;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536427.1;locus_tag=L2557_RS09460;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_075673959.1;transl_table=11 NZ_JAIKUA010000134.1 RefSeq gene 4356 5375 . - . ID=gene-L2557_RS09465;Name=rssB;gbkey=Gene;gene=rssB;gene_biotype=protein_coding;locus_tag=L2557_RS09465 NZ_JAIKUA010000134.1 Protein Homology CDS 4356 5375 . - 0 ID=cds-WP_099660527.1;Parent=gene-L2557_RS09465;Dbxref=GenBank:WP_099660527.1;Name=WP_099660527.1;Ontology_term=GO:0000160;gbkey=CDS;gene=rssB;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248224.1;locus_tag=L2557_RS09465;product=two-component system response regulator RssB;protein_id=WP_099660527.1;transl_table=11 NZ_JAIKUA010000134.1 RefSeq gene 5525 5998 . + . ID=gene-L2557_RS09470;Name=L2557_RS09470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09470 NZ_JAIKUA010000134.1 Protein Homology CDS 5525 5998 . + 0 ID=cds-WP_099660528.1;Parent=gene-L2557_RS09470;Dbxref=GenBank:WP_099660528.1;Name=WP_099660528.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368014.1;locus_tag=L2557_RS09470;product=YchJ family protein;protein_id=WP_099660528.1;transl_table=11 NZ_JAIKUA010000134.1 RefSeq gene 6037 6885 . + . ID=gene-L2557_RS09475;Name=purU;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=L2557_RS09475 NZ_JAIKUA010000134.1 Protein Homology CDS 6037 6885 . + 0 ID=cds-WP_069368973.1;Parent=gene-L2557_RS09475;Dbxref=GenBank:WP_069368973.1;Name=WP_069368973.1;Ontology_term=GO:0006189,GO:0008864;gbkey=CDS;gene=purU;go_function=formyltetrahydrofolate deformylase activity|0008864||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002230891.1;locus_tag=L2557_RS09475;product=formyltetrahydrofolate deformylase;protein_id=WP_069368973.1;transl_table=11 ##sequence-region NZ_JAIKUA010000135.1 1 13287 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000135.1 RefSeq region 1 13287 . + . ID=NZ_JAIKUA010000135.1:1..13287;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000135.1 RefSeq gene 88 5292 . + . ID=gene-L2557_RS09480;Name=L2557_RS09480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09480 NZ_JAIKUA010000135.1 Protein Homology CDS 88 5292 . + 0 ID=cds-WP_235410004.1;Parent=gene-L2557_RS09480;Dbxref=GenBank:WP_235410004.1;Name=WP_235410004.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF036757.6;locus_tag=L2557_RS09480;product=Tc toxin subunit A-related protein;protein_id=WP_235410004.1;transl_table=11 NZ_JAIKUA010000135.1 RefSeq gene 5348 9670 . + . ID=gene-L2557_RS09485;Name=L2557_RS09485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09485 NZ_JAIKUA010000135.1 Protein Homology CDS 5348 9670 . + 0 ID=cds-WP_235410005.1;Parent=gene-L2557_RS09485;Dbxref=GenBank:WP_235410005.1;Name=WP_235410005.1;Ontology_term=GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004240021.1;locus_tag=L2557_RS09485;product=SpvB/TcaC N-terminal domain-containing protein;protein_id=WP_235410005.1;transl_table=11 NZ_JAIKUA010000135.1 RefSeq gene 9732 10049 . + . ID=gene-L2557_RS09490;Name=L2557_RS09490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09490 NZ_JAIKUA010000135.1 Protein Homology CDS 9732 10049 . + 0 ID=cds-WP_036934409.1;Parent=gene-L2557_RS09490;Dbxref=GenBank:WP_036934409.1;Name=WP_036934409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163187.1;locus_tag=L2557_RS09490;product=phage holin family protein;protein_id=WP_036934409.1;transl_table=11 NZ_JAIKUA010000135.1 RefSeq gene 10046 10435 . + . ID=gene-L2557_RS09495;Name=L2557_RS09495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09495 NZ_JAIKUA010000135.1 Protein Homology CDS 10046 10435 . + 0 ID=cds-WP_099660466.1;Parent=gene-L2557_RS09495;Dbxref=GenBank:WP_099660466.1;Name=WP_099660466.1;Ontology_term=GO:0071554,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=cell wall organization or biogenesis|0071554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004157153.1;locus_tag=L2557_RS09495;product=M15 family metallopeptidase;protein_id=WP_099660466.1;transl_table=11 NZ_JAIKUA010000135.1 RefSeq gene 10432 10788 . + . ID=gene-L2557_RS09500;Name=L2557_RS09500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09500 NZ_JAIKUA010000135.1 GeneMarkS-2+ CDS 10432 10788 . + 0 ID=cds-WP_066748856.1;Parent=gene-L2557_RS09500;Dbxref=GenBank:WP_066748856.1;Name=WP_066748856.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS09500;product=DUF2570 domain-containing protein;protein_id=WP_066748856.1;transl_table=11 NZ_JAIKUA010000135.1 RefSeq gene 10730 11011 . + . ID=gene-L2557_RS18010;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=L2557_RS18010 NZ_JAIKUA010000135.1 Protein Homology CDS 10730 11011 . + 0 ID=cds-WP_159363591.1;Parent=gene-L2557_RS18010;Dbxref=GenBank:WP_159363591.1;Name=WP_159363591.1;gbkey=CDS;gene=lysC;inference=COORDINATES: protein motif:HMM:NF048206.1;locus_tag=L2557_RS18010;product=Rz1-like lysis system protein LysC;protein_id=WP_159363591.1;transl_table=11 NZ_JAIKUA010000135.1 RefSeq gene 11016 12992 . + . ID=gene-L2557_RS09505;Name=L2557_RS09505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09505 NZ_JAIKUA010000135.1 Protein Homology CDS 11016 12992 . + 0 ID=cds-WP_235410006.1;Parent=gene-L2557_RS09505;Dbxref=GenBank:WP_235410006.1;Name=WP_235410006.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF037915.6;locus_tag=L2557_RS09505;product=RHS repeat domain-containing protein;protein_id=WP_235410006.1;transl_table=11 ##sequence-region NZ_JAIKUA010000136.1 1 26551 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000136.1 RefSeq region 1 26551 . + . ID=NZ_JAIKUA010000136.1:1..26551;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000136.1 RefSeq gene 159 5246 . + . ID=gene-L2557_RS09510;Name=L2557_RS09510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09510 NZ_JAIKUA010000136.1 Protein Homology CDS 159 5246 . + 0 ID=cds-WP_446430613.1;Parent=gene-L2557_RS09510;Dbxref=GenBank:WP_446430613.1;Name=WP_446430613.1;Ontology_term=GO:0010951,GO:0004866;gbkey=CDS;go_function=endopeptidase inhibitor activity|0004866||IEA;go_process=negative regulation of endopeptidase activity|0010951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248434.1;locus_tag=L2557_RS09510;product=alpha-2-macroglobulin family protein;protein_id=WP_446430613.1;transl_table=11 NZ_JAIKUA010000136.1 RefSeq gene 5295 7616 . + . ID=gene-L2557_RS09515;Name=pbpC;gbkey=Gene;gene=pbpC;gene_biotype=protein_coding;locus_tag=L2557_RS09515 NZ_JAIKUA010000136.1 Protein Homology CDS 5295 7616 . + 0 ID=cds-WP_099659379.1;Parent=gene-L2557_RS09515;Dbxref=GenBank:WP_099659379.1;Name=WP_099659379.1;Note=penicillin-binding protein 1C;Ontology_term=GO:0009252,GO:0008658,GO:0008955;gbkey=CDS;gene=pbpC;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243828.1;locus_tag=L2557_RS09515;product=peptidoglycan glycosyltransferase PbpC;protein_id=WP_099659379.1;transl_table=11 NZ_JAIKUA010000136.1 RefSeq gene 7955 8380 . + . ID=gene-L2557_RS09520;Name=ndk;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=L2557_RS09520 NZ_JAIKUA010000136.1 Protein Homology CDS 7955 8380 . + 0 ID=cds-WP_023581630.1;Parent=gene-L2557_RS09520;Dbxref=GenBank:WP_023581630.1;Name=WP_023581630.1;Ontology_term=GO:0004550;gbkey=CDS;gene=ndk;go_function=nucleoside diphosphate kinase activity|0004550||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243827.1;locus_tag=L2557_RS09520;product=nucleoside-diphosphate kinase;protein_id=WP_023581630.1;transl_table=11 NZ_JAIKUA010000136.1 RefSeq gene 8538 9719 . + . ID=gene-L2557_RS09525;Name=rlmN;gbkey=Gene;gene=rlmN;gene_biotype=protein_coding;gene_synonym=trmG;locus_tag=L2557_RS09525 NZ_JAIKUA010000136.1 Protein Homology CDS 8538 9719 . + 0 ID=cds-WP_023581631.1;Parent=gene-L2557_RS09525;Dbxref=GenBank:WP_023581631.1;Name=WP_023581631.1;gbkey=CDS;gene=rlmN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243825.1;locus_tag=L2557_RS09525;product=dual-specificity RNA methyltransferase RlmN;protein_id=WP_023581631.1;transl_table=11 NZ_JAIKUA010000136.1 RefSeq gene 9808 10242 . + . ID=gene-L2557_RS09530;Name=L2557_RS09530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09530 NZ_JAIKUA010000136.1 Protein Homology CDS 9808 10242 . + 0 ID=cds-WP_075670488.1;Parent=gene-L2557_RS09530;Dbxref=GenBank:WP_075670488.1;Name=WP_075670488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017627969.1;locus_tag=L2557_RS09530;product=hypothetical protein;protein_id=WP_075670488.1;transl_table=11 NZ_JAIKUA010000136.1 RefSeq gene 10317 11288 . + . ID=gene-L2557_RS09535;Name=rodZ;gbkey=Gene;gene=rodZ;gene_biotype=protein_coding;locus_tag=L2557_RS09535 NZ_JAIKUA010000136.1 Protein Homology CDS 10317 11288 . + 0 ID=cds-WP_075670490.1;Parent=gene-L2557_RS09535;Dbxref=GenBank:WP_075670490.1;Name=WP_075670490.1;Ontology_term=GO:0008360,GO:0003677,GO:0016020;gbkey=CDS;gene=rodZ;go_component=membrane|0016020||IEA;go_function=DNA binding|0003677||IEA;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243822.1;locus_tag=L2557_RS09535;product=cytoskeleton protein RodZ;protein_id=WP_075670490.1;transl_table=11 NZ_JAIKUA010000136.1 RefSeq gene 11335 12456 . + . ID=gene-L2557_RS09540;Name=ispG;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=L2557_RS09540 NZ_JAIKUA010000136.1 Protein Homology CDS 11335 12456 . + 0 ID=cds-WP_075670492.1;Parent=gene-L2557_RS09540;Dbxref=GenBank:WP_075670492.1;Name=WP_075670492.1;Ontology_term=GO:0008152,GO:0046429;gbkey=CDS;gene=ispG;go_function=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity (ferredoxin)|0046429||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243820.1;locus_tag=L2557_RS09540;product=flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase;protein_id=WP_075670492.1;transl_table=11 NZ_JAIKUA010000136.1 RefSeq gene 12579 13862 . + . ID=gene-L2557_RS09545;Name=hisS;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=L2557_RS09545 NZ_JAIKUA010000136.1 Protein Homology CDS 12579 13862 . + 0 ID=cds-WP_075670494.1;Parent=gene-L2557_RS09545;Dbxref=GenBank:WP_075670494.1;Name=WP_075670494.1;Ontology_term=GO:0006427,GO:0004821,GO:0005524,GO:0005737;gbkey=CDS;gene=hisS;go_component=cytoplasm|0005737||IEA;go_function=histidine-tRNA ligase activity|0004821||IEA,ATP binding|0005524||IEA;go_process=histidyl-tRNA aminoacylation|0006427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461457.1;locus_tag=L2557_RS09545;product=histidine--tRNA ligase;protein_id=WP_075670494.1;transl_table=11 NZ_JAIKUA010000136.1 RefSeq gene 13873 14493 . + . ID=gene-L2557_RS09550;Name=L2557_RS09550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09550 NZ_JAIKUA010000136.1 Protein Homology CDS 13873 14493 . + 0 ID=cds-WP_075670496.1;Parent=gene-L2557_RS09550;Dbxref=GenBank:WP_075670496.1;Name=WP_075670496.1;Ontology_term=GO:0005515,GO:0044877;gbkey=CDS;go_function=protein binding|0005515||IEA,protein-containing complex binding|0044877||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243818.1;locus_tag=L2557_RS09550;product=YfgM family protein;protein_id=WP_075670496.1;transl_table=11 NZ_JAIKUA010000136.1 RefSeq gene 14508 15680 . + . ID=gene-L2557_RS09555;Name=bamB;gbkey=Gene;gene=bamB;gene_biotype=protein_coding;locus_tag=L2557_RS09555 NZ_JAIKUA010000136.1 Protein Homology CDS 14508 15680 . + 0 ID=cds-WP_075670498.1;Parent=gene-L2557_RS09555;Dbxref=GenBank:WP_075670498.1;Name=WP_075670498.1;Ontology_term=GO:0005515;gbkey=CDS;gene=bamB;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013650286.1;locus_tag=L2557_RS09555;product=outer membrane protein assembly factor BamB;protein_id=WP_075670498.1;transl_table=11 NZ_JAIKUA010000136.1 RefSeq gene 15800 17290 . + . ID=gene-L2557_RS09560;Name=der;gbkey=Gene;gene=der;gene_biotype=protein_coding;locus_tag=L2557_RS09560 NZ_JAIKUA010000136.1 Protein Homology CDS 15800 17290 . + 0 ID=cds-WP_075670500.1;Parent=gene-L2557_RS09560;Dbxref=GenBank:WP_075670500.1;Name=WP_075670500.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=der;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191901.1;locus_tag=L2557_RS09560;product=ribosome biogenesis GTPase Der;protein_id=WP_075670500.1;transl_table=11 NZ_JAIKUA010000136.1 RefSeq gene 17473 17820 . + . ID=gene-L2557_RS09565;Name=L2557_RS09565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09565 NZ_JAIKUA010000136.1 Protein Homology CDS 17473 17820 . + 0 ID=cds-WP_223672346.1;Parent=gene-L2557_RS09565;Dbxref=GenBank:WP_223672346.1;Name=WP_223672346.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368123.1;locus_tag=L2557_RS09565;product=hypothetical protein;protein_id=WP_223672346.1;transl_table=11 NZ_JAIKUA010000136.1 RefSeq gene 17910 18818 . - . ID=gene-L2557_RS09570;Name=hemF;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=L2557_RS09570 NZ_JAIKUA010000136.1 Protein Homology CDS 17910 18818 . - 0 ID=cds-WP_075670502.1;Parent=gene-L2557_RS09570;Dbxref=GenBank:WP_075670502.1;Name=WP_075670502.1;Ontology_term=GO:0006779,GO:0004109;gbkey=CDS;gene=hemF;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827100.1;locus_tag=L2557_RS09570;product=oxygen-dependent coproporphyrinogen oxidase;protein_id=WP_075670502.1;transl_table=11 NZ_JAIKUA010000136.1 RefSeq gene 18952 19389 . + . ID=gene-L2557_RS09575;Name=L2557_RS09575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09575 NZ_JAIKUA010000136.1 Protein Homology CDS 18952 19389 . + 0 ID=cds-WP_075670504.1;Parent=gene-L2557_RS09575;Dbxref=GenBank:WP_075670504.1;Name=WP_075670504.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243811.1;locus_tag=L2557_RS09575;product=GNAT family acetyltransferase;protein_id=WP_075670504.1;transl_table=11 NZ_JAIKUA010000136.1 RefSeq gene 19725 20342 . + . ID=gene-L2557_RS09580;Name=L2557_RS09580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09580 NZ_JAIKUA010000136.1 Protein Homology CDS 19725 20342 . + 0 ID=cds-WP_223673503.1;Parent=gene-L2557_RS09580;Dbxref=GenBank:WP_223673503.1;Name=WP_223673503.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368121.1;locus_tag=L2557_RS09580;product=RpoE-regulated lipoprotein;protein_id=WP_223673503.1;transl_table=11 NZ_JAIKUA010000136.1 RefSeq gene 20463 21359 . + . ID=gene-L2557_RS09585;Name=L2557_RS09585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09585 NZ_JAIKUA010000136.1 Protein Homology CDS 20463 21359 . + 0 ID=cds-WP_075670506.1;Parent=gene-L2557_RS09585;Dbxref=GenBank:WP_075670506.1;Name=WP_075670506.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012229799.1;locus_tag=L2557_RS09585;product=Dyp-type peroxidase;protein_id=WP_075670506.1;transl_table=11 NZ_JAIKUA010000136.1 RefSeq gene 21597 22616 . + . ID=gene-L2557_RS09590;Name=cysP;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=L2557_RS09590 NZ_JAIKUA010000136.1 Protein Homology CDS 21597 22616 . + 0 ID=cds-WP_099659380.1;Parent=gene-L2557_RS09590;Dbxref=GenBank:WP_099659380.1;Name=WP_099659380.1;Ontology_term=GO:1902358,GO:0015419;gbkey=CDS;gene=cysP;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814674.1;locus_tag=L2557_RS09590;product=thiosulfate ABC transporter substrate-binding protein CysP;protein_id=WP_099659380.1;transl_table=11 NZ_JAIKUA010000136.1 RefSeq gene 22616 23449 . + . ID=gene-L2557_RS09595;Name=cysT;gbkey=Gene;gene=cysT;gene_biotype=protein_coding;locus_tag=L2557_RS09595 NZ_JAIKUA010000136.1 Protein Homology CDS 22616 23449 . + 0 ID=cds-WP_075670510.1;Parent=gene-L2557_RS09595;Dbxref=GenBank:WP_075670510.1;Name=WP_075670510.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysT;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005164877.1;locus_tag=L2557_RS09595;product=sulfate/thiosulfate ABC transporter permease CysT;protein_id=WP_075670510.1;transl_table=11 NZ_JAIKUA010000136.1 RefSeq gene 23449 24291 . + . ID=gene-L2557_RS09600;Name=cysW;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=L2557_RS09600 NZ_JAIKUA010000136.1 Protein Homology CDS 23449 24291 . + 0 ID=cds-WP_088495069.1;Parent=gene-L2557_RS09600;Dbxref=GenBank:WP_088495069.1;Name=WP_088495069.1;Ontology_term=GO:0055085,GO:1902358,GO:0015419,GO:0016020;gbkey=CDS;gene=cysW;go_component=membrane|0016020||IEA;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=transmembrane transport|0055085||IEA,sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243804.1;locus_tag=L2557_RS09600;product=sulfate/thiosulfate ABC transporter permease CysW;protein_id=WP_088495069.1;transl_table=11 NZ_JAIKUA010000136.1 RefSeq gene 24322 25410 . + . ID=gene-L2557_RS09605;Name=cysA;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=L2557_RS09605 NZ_JAIKUA010000136.1 Protein Homology CDS 24322 25410 . + 0 ID=cds-WP_075670512.1;Parent=gene-L2557_RS09605;Dbxref=GenBank:WP_075670512.1;Name=WP_075670512.1;Ontology_term=GO:1902358,GO:0005524,GO:0015419,GO:0016020,GO:0043190;gbkey=CDS;gene=cysA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019081738.1;locus_tag=L2557_RS09605;product=sulfate/thiosulfate ABC transporter ATP-binding protein CysA;protein_id=WP_075670512.1;transl_table=11 NZ_JAIKUA010000136.1 RefSeq gene 25588 26472 . + . ID=gene-L2557_RS09610;Name=cysM;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=L2557_RS09610 NZ_JAIKUA010000136.1 Protein Homology CDS 25588 26472 . + 0 ID=cds-WP_075670514.1;Parent=gene-L2557_RS09610;Dbxref=GenBank:WP_075670514.1;Name=WP_075670514.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysM;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661316.1;locus_tag=L2557_RS09610;product=cysteine synthase CysM;protein_id=WP_075670514.1;transl_table=11 ##sequence-region NZ_JAIKUA010000137.1 1 6393 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000137.1 RefSeq region 1 6393 . + . ID=NZ_JAIKUA010000137.1:1..6393;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000137.1 RefSeq gene 1 639 . + . ID=gene-L2557_RS09615;Name=L2557_RS09615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09615;partial=true;start_range=.,1 NZ_JAIKUA010000137.1 Protein Homology CDS 1 639 . + 0 ID=cds-WP_235410007.1;Parent=gene-L2557_RS09615;Dbxref=GenBank:WP_235410007.1;Name=WP_235410007.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827799.1;locus_tag=L2557_RS09615;partial=true;product=HAD family hydrolase;protein_id=WP_235410007.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000137.1 cmsearch riboswitch 684 806 . + . ID=id-NZ_JAIKUA010000137.1:684..806;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAIKUA010000137.1 RefSeq gene 948 2900 . + . ID=gene-L2557_RS09620;Name=thiC;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=L2557_RS09620 NZ_JAIKUA010000137.1 Protein Homology CDS 948 2900 . + 0 ID=cds-WP_109420356.1;Parent=gene-L2557_RS09620;Dbxref=GenBank:WP_109420356.1;Name=WP_109420356.1;Ontology_term=GO:0009228,GO:0051536;gbkey=CDS;gene=thiC;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246916.1;locus_tag=L2557_RS09620;product=phosphomethylpyrimidine synthase ThiC;protein_id=WP_109420356.1;transl_table=11 NZ_JAIKUA010000137.1 RefSeq gene 2884 3531 . + . ID=gene-L2557_RS09625;Name=thiE;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=L2557_RS09625 NZ_JAIKUA010000137.1 Protein Homology CDS 2884 3531 . + 0 ID=cds-WP_075673755.1;Parent=gene-L2557_RS09625;Dbxref=GenBank:WP_075673755.1;Name=WP_075673755.1;Ontology_term=GO:0009228,GO:0004789;gbkey=CDS;gene=thiE;go_function=thiamine-phosphate diphosphorylase activity|0004789||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249137.1;locus_tag=L2557_RS09625;product=thiamine phosphate synthase;protein_id=WP_075673755.1;transl_table=11 NZ_JAIKUA010000137.1 RefSeq gene 3525 4274 . + . ID=gene-L2557_RS09630;Name=L2557_RS09630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09630 NZ_JAIKUA010000137.1 Protein Homology CDS 3525 4274 . + 0 ID=cds-WP_075673754.1;Parent=gene-L2557_RS09630;Dbxref=GenBank:WP_075673754.1;Name=WP_075673754.1;Ontology_term=GO:0016779;gbkey=CDS;go_function=nucleotidyltransferase activity|0016779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368505.1;locus_tag=L2557_RS09630;product=HesA/MoeB/ThiF family protein;protein_id=WP_075673754.1;transl_table=11 NZ_JAIKUA010000137.1 RefSeq gene 4271 4471 . + . ID=gene-L2557_RS09635;Name=thiS;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=L2557_RS09635 NZ_JAIKUA010000137.1 Protein Homology CDS 4271 4471 . + 0 ID=cds-WP_006534717.1;Parent=gene-L2557_RS09635;Dbxref=GenBank:WP_006534717.1;Name=WP_006534717.1;Ontology_term=GO:0009228,GO:0003824;gbkey=CDS;gene=thiS;go_function=catalytic activity|0003824||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250087.1;locus_tag=L2557_RS09635;product=sulfur carrier protein ThiS;protein_id=WP_006534717.1;transl_table=11 NZ_JAIKUA010000137.1 RefSeq gene 4473 5252 . + . ID=gene-L2557_RS09640;Name=L2557_RS09640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09640 NZ_JAIKUA010000137.1 Protein Homology CDS 4473 5252 . + 0 ID=cds-WP_075673753.1;Parent=gene-L2557_RS09640;Dbxref=GenBank:WP_075673753.1;Name=WP_075673753.1;Ontology_term=GO:0000105;gbkey=CDS;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246911.1;locus_tag=L2557_RS09640;product=thiazole synthase;protein_id=WP_075673753.1;transl_table=11 NZ_JAIKUA010000137.1 RefSeq gene 5252 6370 . + . ID=gene-L2557_RS09645;Name=thiH;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=L2557_RS09645 NZ_JAIKUA010000137.1 Protein Homology CDS 5252 6370 . + 0 ID=cds-WP_075673752.1;Parent=gene-L2557_RS09645;Dbxref=GenBank:WP_075673752.1;Name=WP_075673752.1;Ontology_term=GO:0009228,GO:0005506,GO:0016829,GO:0051539,GO:1904047;gbkey=CDS;gene=thiH;go_function=iron ion binding|0005506||IEA,lyase activity|0016829||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246910.1;locus_tag=L2557_RS09645;product=2-iminoacetate synthase ThiH;protein_id=WP_075673752.1;transl_table=11 ##sequence-region NZ_JAIKUA010000138.1 1 16417 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000138.1 RefSeq region 1 16417 . + . ID=NZ_JAIKUA010000138.1:1..16417;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000138.1 RefSeq gene 460 912 . + . ID=gene-L2557_RS09650;Name=L2557_RS09650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09650 NZ_JAIKUA010000138.1 Protein Homology CDS 460 912 . + 0 ID=cds-WP_036912633.1;Parent=gene-L2557_RS09650;Dbxref=GenBank:WP_036912633.1;Name=WP_036912633.1;Ontology_term=GO:0016655,GO:0048038,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243698.1;locus_tag=L2557_RS09650;product=NADH-quinone oxidoreductase subunit A;protein_id=WP_036912633.1;transl_table=11 NZ_JAIKUA010000138.1 RefSeq gene 930 1604 . + . ID=gene-L2557_RS09655;Name=L2557_RS09655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09655 NZ_JAIKUA010000138.1 Protein Homology CDS 930 1604 . + 0 ID=cds-WP_004243697.1;Parent=gene-L2557_RS09655;Dbxref=GenBank:WP_004243697.1;Name=WP_004243697.1;Ontology_term=GO:0008137,GO:0016655,GO:0048038,GO:0051539,GO:0005886,GO:0045271;gbkey=CDS;go_component=plasma membrane|0005886||IEA,respiratory chain complex I|0045271||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,quinone binding|0048038||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228044.1;locus_tag=L2557_RS09655;product=NuoB/complex I 20 kDa subunit family protein;protein_id=WP_004243697.1;transl_table=11 NZ_JAIKUA010000138.1 RefSeq gene 1681 3477 . + . ID=gene-L2557_RS09660;Name=nuoC;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=L2557_RS09660 NZ_JAIKUA010000138.1 Protein Homology CDS 1681 3477 . + 0 ID=cds-WP_075670636.1;Parent=gene-L2557_RS09660;Dbxref=GenBank:WP_075670636.1;Name=WP_075670636.1;Ontology_term=GO:0048038,GO:0050136,GO:0051287,GO:0030964;gbkey=CDS;gene=nuoC;go_component=NADH dehydrogenase complex|0030964||IEA;go_function=quinone binding|0048038||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656262.1;locus_tag=L2557_RS09660;product=NADH-quinone oxidoreductase subunit C/D;protein_id=WP_075670636.1;transl_table=11 NZ_JAIKUA010000138.1 RefSeq gene 3480 4025 . + . ID=gene-L2557_RS09665;Name=nuoE;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=L2557_RS09665 NZ_JAIKUA010000138.1 Protein Homology CDS 3480 4025 . + 0 ID=cds-WP_006533305.1;Parent=gene-L2557_RS09665;Dbxref=GenBank:WP_006533305.1;Name=WP_006533305.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nuoE;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243693.1;locus_tag=L2557_RS09665;product=NADH-quinone oxidoreductase subunit NuoE;protein_id=WP_006533305.1;transl_table=11 NZ_JAIKUA010000138.1 RefSeq gene 4022 5386 . + . ID=gene-L2557_RS09670;Name=nuoF;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=L2557_RS09670 NZ_JAIKUA010000138.1 Protein Homology CDS 4022 5386 . + 0 ID=cds-WP_088495125.1;Parent=gene-L2557_RS09670;Dbxref=GenBank:WP_088495125.1;Name=WP_088495125.1;Ontology_term=GO:0008137,GO:0051539;gbkey=CDS;gene=nuoF;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243692.1;locus_tag=L2557_RS09670;product=NADH-quinone oxidoreductase subunit NuoF;protein_id=WP_088495125.1;transl_table=11 NZ_JAIKUA010000138.1 RefSeq gene 5440 8172 . + . ID=gene-L2557_RS09675;Name=nuoG;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=L2557_RS09675 NZ_JAIKUA010000138.1 Protein Homology CDS 5440 8172 . + 0 ID=cds-WP_235410008.1;Parent=gene-L2557_RS09675;Dbxref=GenBank:WP_235410008.1;Name=WP_235410008.1;Ontology_term=GO:0006120,GO:0050136,GO:0051536;gbkey=CDS;gene=nuoG;go_function=NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=mitochondrial electron transport%2C NADH to ubiquinone|0006120||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248389.1;locus_tag=L2557_RS09675;product=NADH-quinone oxidoreductase subunit NuoG;protein_id=WP_235410008.1;transl_table=11 NZ_JAIKUA010000138.1 RefSeq gene 8172 9149 . + . ID=gene-L2557_RS09680;Name=nuoH;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=L2557_RS09680 NZ_JAIKUA010000138.1 Protein Homology CDS 8172 9149 . + 0 ID=cds-WP_075670642.1;Parent=gene-L2557_RS09680;Dbxref=GenBank:WP_075670642.1;Name=WP_075670642.1;gbkey=CDS;gene=nuoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015875065.1;locus_tag=L2557_RS09680;product=NADH-quinone oxidoreductase subunit NuoH;protein_id=WP_075670642.1;transl_table=11 NZ_JAIKUA010000138.1 RefSeq gene 9164 9706 . + . ID=gene-L2557_RS09685;Name=nuoI;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=L2557_RS09685 NZ_JAIKUA010000138.1 Protein Homology CDS 9164 9706 . + 0 ID=cds-WP_006533299.1;Parent=gene-L2557_RS09685;Dbxref=GenBank:WP_006533299.1;Name=WP_006533299.1;Ontology_term=GO:0016651,GO:0051539,GO:0016020;gbkey=CDS;gene=nuoI;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015959823.1;locus_tag=L2557_RS09685;product=NADH-quinone oxidoreductase subunit NuoI;protein_id=WP_006533299.1;transl_table=11 NZ_JAIKUA010000138.1 RefSeq gene 9719 10252 . + . ID=gene-L2557_RS09690;Name=nuoJ;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=L2557_RS09690 NZ_JAIKUA010000138.1 Protein Homology CDS 9719 10252 . + 0 ID=cds-WP_075670644.1;Parent=gene-L2557_RS09690;Dbxref=GenBank:WP_075670644.1;Name=WP_075670644.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoJ;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243688.1;locus_tag=L2557_RS09690;product=NADH-quinone oxidoreductase subunit J;protein_id=WP_075670644.1;transl_table=11 NZ_JAIKUA010000138.1 RefSeq gene 10249 10551 . + . ID=gene-L2557_RS09695;Name=nuoK;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=L2557_RS09695 NZ_JAIKUA010000138.1 Protein Homology CDS 10249 10551 . + 0 ID=cds-WP_023581731.1;Parent=gene-L2557_RS09695;Dbxref=GenBank:WP_023581731.1;Name=WP_023581731.1;Ontology_term=GO:0042773,GO:0016651;gbkey=CDS;gene=nuoK;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683663.1;locus_tag=L2557_RS09695;product=NADH-quinone oxidoreductase subunit NuoK;protein_id=WP_023581731.1;transl_table=11 NZ_JAIKUA010000138.1 RefSeq gene 10548 12383 . + . ID=gene-L2557_RS09700;Name=nuoL;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=L2557_RS09700 NZ_JAIKUA010000138.1 Protein Homology CDS 10548 12383 . + 0 ID=cds-WP_109419060.1;Parent=gene-L2557_RS09700;Dbxref=GenBank:WP_109419060.1;Name=WP_109419060.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoL;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210270.1;locus_tag=L2557_RS09700;product=NADH-quinone oxidoreductase subunit L;protein_id=WP_109419060.1;transl_table=11 NZ_JAIKUA010000138.1 RefSeq gene 12403 13932 . + . ID=gene-L2557_RS09705;Name=nuoM;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=L2557_RS09705 NZ_JAIKUA010000138.1 Protein Homology CDS 12403 13932 . + 0 ID=cds-WP_099659409.1;Parent=gene-L2557_RS09705;Dbxref=GenBank:WP_099659409.1;Name=WP_099659409.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=nuoM;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936002.1;locus_tag=L2557_RS09705;product=NADH-quinone oxidoreductase subunit M;protein_id=WP_099659409.1;transl_table=11 NZ_JAIKUA010000138.1 RefSeq gene 13939 15408 . + . ID=gene-L2557_RS09710;Name=nuoN;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=L2557_RS09710 NZ_JAIKUA010000138.1 Protein Homology CDS 13939 15408 . + 0 ID=cds-WP_075670650.1;Parent=gene-L2557_RS09710;Dbxref=GenBank:WP_075670650.1;Name=WP_075670650.1;Ontology_term=GO:0008137;gbkey=CDS;gene=nuoN;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628000.1;locus_tag=L2557_RS09710;product=NADH-quinone oxidoreductase subunit NuoN;protein_id=WP_075670650.1;transl_table=11 NZ_JAIKUA010000138.1 RefSeq gene 15470 16417 . - . ID=gene-L2557_RS09715;Name=L2557_RS09715;end_range=16417,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09715;partial=true NZ_JAIKUA010000138.1 Protein Homology CDS 15470 16417 . - 0 ID=cds-WP_235410009.1;Parent=gene-L2557_RS09715;Dbxref=GenBank:WP_235410009.1;Name=WP_235410009.1;Ontology_term=GO:0046930;end_range=16417,.;gbkey=CDS;go_component=pore complex|0046930||IEA;inference=COORDINATES: protein motif:HMM:NF033927.1;locus_tag=L2557_RS09715;partial=true;product=alpha-xenorhabdolysin family binary toxin subunit B;protein_id=WP_235410009.1;transl_table=11 ##sequence-region NZ_JAIKUA010000139.1 1 11500 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000139.1 RefSeq region 1 11500 . + . ID=NZ_JAIKUA010000139.1:1..11500;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000139.1 RefSeq gene 29 676 . + . ID=gene-L2557_RS09720;Name=L2557_RS09720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09720 NZ_JAIKUA010000139.1 Protein Homology CDS 29 676 . + 0 ID=cds-WP_223672352.1;Parent=gene-L2557_RS09720;Dbxref=GenBank:WP_223672352.1;Name=WP_223672352.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533461.1;locus_tag=L2557_RS09720;product=hypothetical protein;protein_id=WP_223672352.1;transl_table=11 NZ_JAIKUA010000139.1 RefSeq gene 766 1965 . - . ID=gene-L2557_RS09725;Name=hmpA;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=L2557_RS09725 NZ_JAIKUA010000139.1 Protein Homology CDS 766 1965 . - 0 ID=cds-WP_075670464.1;Parent=gene-L2557_RS09725;Dbxref=GenBank:WP_075670464.1;Name=WP_075670464.1;Ontology_term=GO:0051409,GO:0008941,GO:0019825,GO:0020037,GO:0071949;gbkey=CDS;gene=hmpA;go_function=nitric oxide dioxygenase NAD(P)H activity|0008941||IEA,oxygen binding|0019825||IEA,heme binding|0020037||IEA,FAD binding|0071949||IEA;go_process=response to nitrosative stress|0051409||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243863.1;locus_tag=L2557_RS09725;product=NO-inducible flavohemoprotein;protein_id=WP_075670464.1;transl_table=11 NZ_JAIKUA010000139.1 RefSeq gene 2332 3585 . + . ID=gene-L2557_RS09730;Name=glyA;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=L2557_RS09730 NZ_JAIKUA010000139.1 Protein Homology CDS 2332 3585 . + 0 ID=cds-WP_075670466.1;Parent=gene-L2557_RS09730;Dbxref=GenBank:WP_075670466.1;Name=WP_075670466.1;Ontology_term=GO:0019264,GO:0004372,GO:0008270,GO:0030170,GO:0070905;gbkey=CDS;gene=glyA;go_function=glycine hydroxymethyltransferase activity|0004372||IEA,zinc ion binding|0008270||IEA,pyridoxal phosphate binding|0030170||IEA,serine binding|0070905||IEA;go_process=glycine biosynthetic process from serine|0019264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019077397.1;locus_tag=L2557_RS09730;product=serine hydroxymethyltransferase;protein_id=WP_075670466.1;transl_table=11 NZ_JAIKUA010000139.1 RefSeq gene 3678 4832 . + . ID=gene-L2557_RS09735;Name=L2557_RS09735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09735 NZ_JAIKUA010000139.1 Protein Homology CDS 3678 4832 . + 0 ID=cds-WP_164530599.1;Parent=gene-L2557_RS09735;Dbxref=GenBank:WP_164530599.1;Name=WP_164530599.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368131.1;locus_tag=L2557_RS09735;product=3-phenylpropionate MFS transporter;protein_id=WP_164530599.1;transl_table=11 NZ_JAIKUA010000139.1 RefSeq gene 5001 6269 . + . ID=gene-L2557_RS09740;Name=L2557_RS09740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09740 NZ_JAIKUA010000139.1 Protein Homology CDS 5001 6269 . + 0 ID=cds-WP_099659377.1;Parent=gene-L2557_RS09740;Dbxref=GenBank:WP_099659377.1;Name=WP_099659377.1;Ontology_term=GO:0006508,GO:0004177,GO:0008233,GO:0016787,GO:0046872,GO:0070006;gbkey=CDS;go_function=aminopeptidase activity|0004177||IEA,peptidase activity|0008233||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243858.1;locus_tag=L2557_RS09740;product=M24 family metallopeptidase;protein_id=WP_099659377.1;transl_table=11 NZ_JAIKUA010000139.1 RefSeq gene 6307 6978 . + . ID=gene-L2557_RS09745;Name=L2557_RS09745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09745 NZ_JAIKUA010000139.1 Protein Homology CDS 6307 6978 . + 0 ID=cds-WP_075670472.1;Parent=gene-L2557_RS09745;Dbxref=GenBank:WP_075670472.1;Name=WP_075670472.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827094.1;locus_tag=L2557_RS09745;product=CerR family C-terminal domain-containing protein;protein_id=WP_075670472.1;transl_table=11 NZ_JAIKUA010000139.1 RefSeq gene 7043 7846 . - . ID=gene-L2557_RS09750;Name=suhB;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=L2557_RS09750 NZ_JAIKUA010000139.1 Protein Homology CDS 7043 7846 . - 0 ID=cds-WP_023581619.1;Parent=gene-L2557_RS09750;Dbxref=GenBank:WP_023581619.1;Name=WP_023581619.1;Ontology_term=GO:0046854,GO:0008934;gbkey=CDS;gene=suhB;go_function=inositol monophosphate 1-phosphatase activity|0008934||IEA;go_process=phosphatidylinositol phosphate biosynthetic process|0046854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000553460.1;locus_tag=L2557_RS09750;product=inositol-1-monophosphatase;protein_id=WP_023581619.1;transl_table=11 NZ_JAIKUA010000139.1 RefSeq gene 7971 8699 . + . ID=gene-L2557_RS09755;Name=trmJ;gbkey=Gene;gene=trmJ;gene_biotype=protein_coding;locus_tag=L2557_RS09755 NZ_JAIKUA010000139.1 Protein Homology CDS 7971 8699 . + 0 ID=cds-WP_075670474.1;Parent=gene-L2557_RS09755;Dbxref=GenBank:WP_075670474.1;Name=WP_075670474.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=trmJ;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827095.1;locus_tag=L2557_RS09755;product=tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ;protein_id=WP_075670474.1;transl_table=11 NZ_JAIKUA010000139.1 RefSeq gene 8831 9325 . + . ID=gene-L2557_RS09760;Name=iscR;gbkey=Gene;gene=iscR;gene_biotype=protein_coding;locus_tag=L2557_RS09760 NZ_JAIKUA010000139.1 Protein Homology CDS 8831 9325 . + 0 ID=cds-WP_006533450.1;Parent=gene-L2557_RS09760;Dbxref=GenBank:WP_006533450.1;Name=WP_006533450.1;gbkey=CDS;gene=iscR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533450.1;locus_tag=L2557_RS09760;product=Fe-S cluster assembly transcriptional regulator IscR;protein_id=WP_006533450.1;transl_table=11 NZ_JAIKUA010000139.1 RefSeq gene 9394 10608 . + . ID=gene-L2557_RS09765;Name=L2557_RS09765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09765 NZ_JAIKUA010000139.1 Protein Homology CDS 9394 10608 . + 0 ID=cds-WP_072063243.1;Parent=gene-L2557_RS09765;Dbxref=GenBank:WP_072063243.1;Name=WP_072063243.1;Ontology_term=GO:0044571,GO:0030170,GO:0031071;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=[2Fe-2S] cluster assembly|0044571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017459011.1;locus_tag=L2557_RS09765;product=IscS subfamily cysteine desulfurase;protein_id=WP_072063243.1;transl_table=11 NZ_JAIKUA010000139.1 RefSeq gene 10633 11019 . + . ID=gene-L2557_RS09770;Name=iscU;gbkey=Gene;gene=iscU;gene_biotype=protein_coding;locus_tag=L2557_RS09770 NZ_JAIKUA010000139.1 Protein Homology CDS 10633 11019 . + 0 ID=cds-WP_023581622.1;Parent=gene-L2557_RS09770;Dbxref=GenBank:WP_023581622.1;Name=WP_023581622.1;Ontology_term=GO:0016226,GO:0005198,GO:0005506,GO:0051536;gbkey=CDS;gene=iscU;go_function=structural molecule activity|0005198||IEA,iron ion binding|0005506||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331707.1;locus_tag=L2557_RS09770;product=Fe-S cluster assembly scaffold IscU;protein_id=WP_023581622.1;transl_table=11 NZ_JAIKUA010000139.1 RefSeq gene 11109 11432 . + . ID=gene-L2557_RS09775;Name=iscA;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=L2557_RS09775 NZ_JAIKUA010000139.1 Protein Homology CDS 11109 11432 . + 0 ID=cds-WP_006533446.1;Parent=gene-L2557_RS09775;Dbxref=GenBank:WP_006533446.1;Name=WP_006533446.1;gbkey=CDS;gene=iscA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461476.1;locus_tag=L2557_RS09775;product=iron-sulfur cluster assembly protein IscA;protein_id=WP_006533446.1;transl_table=11 ##sequence-region NZ_JAIKUA010000014.1 1 25180 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000014.1 RefSeq region 1 25180 . + . ID=NZ_JAIKUA010000014.1:1..25180;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000014.1 RefSeq gene 272 835 . + . ID=gene-L2557_RS01140;Name=L2557_RS01140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01140 NZ_JAIKUA010000014.1 Protein Homology CDS 272 835 . + 0 ID=cds-WP_075674030.1;Parent=gene-L2557_RS01140;Dbxref=GenBank:WP_075674030.1;Name=WP_075674030.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246926.1;locus_tag=L2557_RS01140;product=gamma carbonic anhydrase family protein;protein_id=WP_075674030.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 811 1071 . - . ID=gene-L2557_RS01145;Name=L2557_RS01145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01145 NZ_JAIKUA010000014.1 Protein Homology CDS 811 1071 . - 0 ID=cds-WP_075674031.1;Parent=gene-L2557_RS01145;Dbxref=GenBank:WP_075674031.1;Name=WP_075674031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249882.1;locus_tag=L2557_RS01145;product=DUF1488 family protein;protein_id=WP_075674031.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 1068 1892 . - . ID=gene-L2557_RS01150;Name=aroE;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=L2557_RS01150 NZ_JAIKUA010000014.1 Protein Homology CDS 1068 1892 . - 0 ID=cds-WP_075674032.1;Parent=gene-L2557_RS01150;Dbxref=GenBank:WP_075674032.1;Name=WP_075674032.1;Ontology_term=GO:0019632,GO:0004764;gbkey=CDS;gene=aroE;go_function=shikimate 3-dehydrogenase (NADP+) activity|0004764||IEA;go_process=shikimate metabolic process|0019632||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827501.1;locus_tag=L2557_RS01150;product=shikimate dehydrogenase;protein_id=WP_075674032.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 1898 2467 . - . ID=gene-L2557_RS01155;Name=tsaC;gbkey=Gene;gene=tsaC;gene_biotype=protein_coding;locus_tag=L2557_RS01155 NZ_JAIKUA010000014.1 Protein Homology CDS 1898 2467 . - 0 ID=cds-WP_075674033.1;Parent=gene-L2557_RS01155;Dbxref=GenBank:WP_075674033.1;Name=WP_075674033.1;Ontology_term=GO:0002949,GO:0003725,GO:0005524;gbkey=CDS;gene=tsaC;go_function=double-stranded RNA binding|0003725||IEA,ATP binding|0005524||IEA;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148762.1;locus_tag=L2557_RS01155;product=L-threonylcarbamoyladenylate synthase type 1 TsaC;protein_id=WP_075674033.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 2460 3017 . - . ID=gene-L2557_RS01160;Name=L2557_RS01160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01160 NZ_JAIKUA010000014.1 Protein Homology CDS 2460 3017 . - 0 ID=cds-WP_075674034.1;Parent=gene-L2557_RS01160;Dbxref=GenBank:WP_075674034.1;Name=WP_075674034.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005694;gbkey=CDS;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827503.1;locus_tag=L2557_RS01160;product=topoisomerase DNA-binding C4 zinc finger domain-containing protein;protein_id=WP_075674034.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 3036 4181 . - . ID=gene-L2557_RS01165;Name=dprA;gbkey=Gene;gene=dprA;gene_biotype=protein_coding;locus_tag=L2557_RS01165 NZ_JAIKUA010000014.1 Protein Homology CDS 3036 4181 . - 0 ID=cds-WP_099660731.1;Parent=gene-L2557_RS01165;Dbxref=GenBank:WP_099660731.1;Name=WP_099660731.1;Ontology_term=GO:0009294;gbkey=CDS;gene=dprA;go_process=DNA-mediated transformation|0009294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535524.1;locus_tag=L2557_RS01165;product=DNA-processing protein DprA;protein_id=WP_099660731.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 4312 4836 . + . ID=gene-L2557_RS01170;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=L2557_RS01170 NZ_JAIKUA010000014.1 Protein Homology CDS 4312 4836 . + 0 ID=cds-WP_075674036.1;Parent=gene-L2557_RS01170;Dbxref=GenBank:WP_075674036.1;Name=WP_075674036.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246933.1;locus_tag=L2557_RS01170;product=peptide deformylase;protein_id=WP_075674036.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 4863 5810 . + . ID=gene-L2557_RS01175;Name=fmt;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=L2557_RS01175 NZ_JAIKUA010000014.1 Protein Homology CDS 4863 5810 . + 0 ID=cds-WP_109420380.1;Parent=gene-L2557_RS01175;Dbxref=GenBank:WP_109420380.1;Name=WP_109420380.1;Ontology_term=GO:0071951,GO:0004479,GO:0005737;gbkey=CDS;gene=fmt;go_component=cytoplasm|0005737||IEA;go_function=methionyl-tRNA formyltransferase activity|0004479||IEA;go_process=conversion of methionyl-tRNA to N-formyl-methionyl-tRNA|0071951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249886.1;locus_tag=L2557_RS01175;product=methionyl-tRNA formyltransferase;protein_id=WP_109420380.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 5910 7178 . + . ID=gene-L2557_RS01180;Name=rsmB;gbkey=Gene;gene=rsmB;gene_biotype=protein_coding;locus_tag=L2557_RS01180 NZ_JAIKUA010000014.1 Protein Homology CDS 5910 7178 . + 0 ID=cds-WP_099660732.1;Parent=gene-L2557_RS01180;Dbxref=GenBank:WP_099660732.1;Name=WP_099660732.1;Ontology_term=GO:0001510,GO:0006355,GO:0006364,GO:0003723,GO:0008649;gbkey=CDS;gene=rsmB;go_function=RNA binding|0003723||IEA,rRNA methyltransferase activity|0008649||IEA;go_process=RNA methylation|0001510||IEA,regulation of DNA-templated transcription|0006355||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004956134.1;locus_tag=L2557_RS01180;product=16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB;protein_id=WP_099660732.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 7291 8667 . + . ID=gene-L2557_RS01185;Name=trkA;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;locus_tag=L2557_RS01185 NZ_JAIKUA010000014.1 Protein Homology CDS 7291 8667 . + 0 ID=cds-WP_075674039.1;Parent=gene-L2557_RS01185;Dbxref=GenBank:WP_075674039.1;Name=WP_075674039.1;Ontology_term=GO:0006813,GO:0015079,GO:0016020;gbkey=CDS;gene=trkA;go_component=membrane|0016020||IEA;go_function=potassium ion transmembrane transporter activity|0015079||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125888.1;locus_tag=L2557_RS01185;product=Trk system potassium transporter TrkA;protein_id=WP_075674039.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 8783 9190 . + . ID=gene-L2557_RS01190;Name=mscL;gbkey=Gene;gene=mscL;gene_biotype=protein_coding;locus_tag=L2557_RS01190 NZ_JAIKUA010000014.1 Protein Homology CDS 8783 9190 . + 0 ID=cds-WP_023583476.1;Parent=gene-L2557_RS01190;Dbxref=GenBank:WP_023583476.1;Name=WP_023583476.1;gbkey=CDS;gene=mscL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246937.1;locus_tag=L2557_RS01190;product=large-conductance mechanosensitive channel protein MscL;protein_id=WP_023583476.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 9194 9400 . - . ID=gene-L2557_RS01195;Name=L2557_RS01195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01195 NZ_JAIKUA010000014.1 Protein Homology CDS 9194 9400 . - 0 ID=cds-WP_023583475.1;Parent=gene-L2557_RS01195;Dbxref=GenBank:WP_023583475.1;Name=WP_023583475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246938.1;locus_tag=L2557_RS01195;product=alternative ribosome-rescue factor A;protein_id=WP_023583475.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 9451 9864 . - . ID=gene-L2557_RS01200;Name=zntR;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=L2557_RS01200 NZ_JAIKUA010000014.1 Protein Homology CDS 9451 9864 . - 0 ID=cds-WP_069368787.1;Parent=gene-L2557_RS01200;Dbxref=GenBank:WP_069368787.1;Name=WP_069368787.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;gene=zntR;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246939.1;locus_tag=L2557_RS01200;product=Zn(2+)-responsive transcriptional regulator;protein_id=WP_069368787.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 10161 10547 . - . ID=gene-L2557_RS01205;Name=rplQ;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=L2557_RS01205 NZ_JAIKUA010000014.1 Protein Homology CDS 10161 10547 . - 0 ID=cds-WP_004246940.1;Parent=gene-L2557_RS01205;Dbxref=GenBank:WP_004246940.1;Name=WP_004246940.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462318.1;locus_tag=L2557_RS01205;product=50S ribosomal protein L17;protein_id=WP_004246940.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 10585 11574 . - . ID=gene-L2557_RS01210;Name=L2557_RS01210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01210 NZ_JAIKUA010000014.1 Protein Homology CDS 10585 11574 . - 0 ID=cds-WP_006535513.1;Parent=gene-L2557_RS01210;Dbxref=GenBank:WP_006535513.1;Name=WP_006535513.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970247.1;locus_tag=L2557_RS01210;product=DNA-directed RNA polymerase subunit alpha;protein_id=WP_006535513.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 11600 12220 . - . ID=gene-L2557_RS01215;Name=rpsD;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=L2557_RS01215 NZ_JAIKUA010000014.1 Protein Homology CDS 11600 12220 . - 0 ID=cds-WP_004246942.1;Parent=gene-L2557_RS01215;Dbxref=GenBank:WP_004246942.1;Name=WP_004246942.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0015935;gbkey=CDS;gene=rpsD;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1;locus_tag=L2557_RS01215;product=30S ribosomal protein S4;protein_id=WP_004246942.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 12257 12646 . - . ID=gene-L2557_RS01220;Name=rpsK;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=L2557_RS01220 NZ_JAIKUA010000014.1 Protein Homology CDS 12257 12646 . - 0 ID=cds-WP_002919257.1;Parent=gene-L2557_RS01220;Dbxref=GenBank:WP_002919257.1;Name=WP_002919257.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1;locus_tag=L2557_RS01220;product=30S ribosomal protein S11;protein_id=WP_002919257.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 12663 13019 . - . ID=gene-L2557_RS01225;Name=rpsM;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=L2557_RS01225 NZ_JAIKUA010000014.1 Protein Homology CDS 12663 13019 . - 0 ID=cds-WP_036914623.1;Parent=gene-L2557_RS01225;Dbxref=GenBank:WP_036914623.1;Name=WP_036914623.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsM;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019935869.1;locus_tag=L2557_RS01225;product=30S ribosomal protein S13;protein_id=WP_036914623.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 13166 13282 . - . ID=gene-L2557_RS01230;Name=rpmJ;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=L2557_RS01230 NZ_JAIKUA010000014.1 Protein Homology CDS 13166 13282 . - 0 ID=cds-WP_071788572.1;Parent=gene-L2557_RS01230;Dbxref=GenBank:WP_071788572.1;Name=WP_071788572.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmJ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1;locus_tag=L2557_RS01230;product=50S ribosomal protein L36;protein_id=WP_071788572.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 13325 14647 . - . ID=gene-L2557_RS01235;Name=secY;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=L2557_RS01235 NZ_JAIKUA010000014.1 Protein Homology CDS 13325 14647 . - 0 ID=cds-WP_006535510.1;Parent=gene-L2557_RS01235;Dbxref=GenBank:WP_006535510.1;Name=WP_006535510.1;Ontology_term=GO:0015031,GO:0043952,GO:0016020;gbkey=CDS;gene=secY;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017374142.1;locus_tag=L2557_RS01235;product=preprotein translocase subunit SecY;protein_id=WP_006535510.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 14655 15089 . - . ID=gene-L2557_RS01240;Name=rplO;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=L2557_RS01240 NZ_JAIKUA010000014.1 Protein Homology CDS 14655 15089 . - 0 ID=cds-WP_004246944.1;Parent=gene-L2557_RS01240;Dbxref=GenBank:WP_004246944.1;Name=WP_004246944.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplO;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095501.1;locus_tag=L2557_RS01240;product=50S ribosomal protein L15;protein_id=WP_004246944.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 15093 15272 . - . ID=gene-L2557_RS01245;Name=rpmD;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=L2557_RS01245 NZ_JAIKUA010000014.1 Protein Homology CDS 15093 15272 . - 0 ID=cds-WP_036914634.1;Parent=gene-L2557_RS01245;Dbxref=GenBank:WP_036914634.1;Name=WP_036914634.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmD;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147215.1;locus_tag=L2557_RS01245;product=50S ribosomal protein L30;protein_id=WP_036914634.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 15278 15778 . - . ID=gene-L2557_RS01250;Name=rpsE;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=L2557_RS01250 NZ_JAIKUA010000014.1 Protein Homology CDS 15278 15778 . - 0 ID=cds-WP_023583472.1;Parent=gene-L2557_RS01250;Dbxref=GenBank:WP_023583472.1;Name=WP_023583472.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsE;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002445361.1;locus_tag=L2557_RS01250;product=30S ribosomal protein S5;protein_id=WP_023583472.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 15793 16146 . - . ID=gene-L2557_RS01255;Name=rplR;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=L2557_RS01255 NZ_JAIKUA010000014.1 Protein Homology CDS 15793 16146 . - 0 ID=cds-WP_075674040.1;Parent=gene-L2557_RS01255;Dbxref=GenBank:WP_075674040.1;Name=WP_075674040.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplR;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005970258.1;locus_tag=L2557_RS01255;product=50S ribosomal protein L18;protein_id=WP_075674040.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 16156 16689 . - . ID=gene-L2557_RS01260;Name=rplF;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=L2557_RS01260 NZ_JAIKUA010000014.1 Protein Homology CDS 16156 16689 . - 0 ID=cds-WP_023583470.1;Parent=gene-L2557_RS01260;Dbxref=GenBank:WP_023583470.1;Name=WP_023583470.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843,GO:0005840;gbkey=CDS;gene=rplF;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003031129.1;locus_tag=L2557_RS01260;product=50S ribosomal protein L6;protein_id=WP_023583470.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 16704 17096 . - . ID=gene-L2557_RS01265;Name=rpsH;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=L2557_RS01265 NZ_JAIKUA010000014.1 Protein Homology CDS 16704 17096 . - 0 ID=cds-WP_004246950.1;Parent=gene-L2557_RS01265;Dbxref=GenBank:WP_004246950.1;Name=WP_004246950.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsH;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148781.1;locus_tag=L2557_RS01265;product=30S ribosomal protein S8;protein_id=WP_004246950.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 17129 17434 . - . ID=gene-L2557_RS01270;Name=rpsN;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=L2557_RS01270 NZ_JAIKUA010000014.1 Protein Homology CDS 17129 17434 . - 0 ID=cds-WP_006535503.1;Parent=gene-L2557_RS01270;Dbxref=GenBank:WP_006535503.1;Name=WP_006535503.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsN;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005599304.1;locus_tag=L2557_RS01270;product=30S ribosomal protein S14;protein_id=WP_006535503.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 17447 17986 . - . ID=gene-L2557_RS01275;Name=rplE;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=L2557_RS01275 NZ_JAIKUA010000014.1 Protein Homology CDS 17447 17986 . - 0 ID=cds-WP_075674041.1;Parent=gene-L2557_RS01275;Dbxref=GenBank:WP_075674041.1;Name=WP_075674041.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001096198.1;locus_tag=L2557_RS01275;product=50S ribosomal protein L5;protein_id=WP_075674041.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 18000 18314 . - . ID=gene-L2557_RS01280;Name=rplX;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=L2557_RS01280 NZ_JAIKUA010000014.1 Protein Homology CDS 18000 18314 . - 0 ID=cds-WP_075674042.1;Parent=gene-L2557_RS01280;Dbxref=GenBank:WP_075674042.1;Name=WP_075674042.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplX;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000729185.1;locus_tag=L2557_RS01280;product=50S ribosomal protein L24;protein_id=WP_075674042.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 18325 18696 . - . ID=gene-L2557_RS01285;Name=rplN;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=L2557_RS01285 NZ_JAIKUA010000014.1 Protein Homology CDS 18325 18696 . - 0 ID=cds-WP_004246955.1;Parent=gene-L2557_RS01285;Dbxref=GenBank:WP_004246955.1;Name=WP_004246955.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplN;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012728338.1;locus_tag=L2557_RS01285;product=50S ribosomal protein L14;protein_id=WP_004246955.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 18873 19127 . - . ID=gene-L2557_RS01290;Name=rpsQ;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=L2557_RS01290 NZ_JAIKUA010000014.1 Protein Homology CDS 18873 19127 . - 0 ID=cds-WP_023583468.1;Parent=gene-L2557_RS01290;Dbxref=GenBank:WP_023583468.1;Name=WP_023583468.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsQ;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006817275.1;locus_tag=L2557_RS01290;product=30S ribosomal protein S17;protein_id=WP_023583468.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 19127 19318 . - . ID=gene-L2557_RS01295;Name=rpmC;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=L2557_RS01295 NZ_JAIKUA010000014.1 Protein Homology CDS 19127 19318 . - 0 ID=cds-WP_004238624.1;Parent=gene-L2557_RS01295;Dbxref=GenBank:WP_004238624.1;Name=WP_004238624.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000644743.1;locus_tag=L2557_RS01295;product=50S ribosomal protein L29;protein_id=WP_004238624.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 19318 19728 . - . ID=gene-L2557_RS01300;Name=rplP;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=L2557_RS01300 NZ_JAIKUA010000014.1 Protein Homology CDS 19318 19728 . - 0 ID=cds-WP_006535500.1;Parent=gene-L2557_RS01300;Dbxref=GenBank:WP_006535500.1;Name=WP_006535500.1;Ontology_term=GO:0006412,GO:0003735,GO:0019843;gbkey=CDS;gene=rplP;go_function=structural constituent of ribosome|0003735||IEA,rRNA binding|0019843||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017805229.1;locus_tag=L2557_RS01300;product=50S ribosomal protein L16;protein_id=WP_006535500.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 19741 20442 . - . ID=gene-L2557_RS01305;Name=rpsC;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=L2557_RS01305 NZ_JAIKUA010000014.1 Protein Homology CDS 19741 20442 . - 0 ID=cds-WP_023583467.1;Parent=gene-L2557_RS01305;Dbxref=GenBank:WP_023583467.1;Name=WP_023583467.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;gene=rpsC;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742302.1;locus_tag=L2557_RS01305;product=30S ribosomal protein S3;protein_id=WP_023583467.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 20460 20792 . - . ID=gene-L2557_RS01310;Name=rplV;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=L2557_RS01310 NZ_JAIKUA010000014.1 Protein Homology CDS 20460 20792 . - 0 ID=cds-WP_006535498.1;Parent=gene-L2557_RS01310;Dbxref=GenBank:WP_006535498.1;Name=WP_006535498.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplV;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000447526.1;locus_tag=L2557_RS01310;product=50S ribosomal protein L22;protein_id=WP_006535498.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 20807 21085 . - . ID=gene-L2557_RS01315;Name=rpsS;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=L2557_RS01315 NZ_JAIKUA010000014.1 Protein Homology CDS 20807 21085 . - 0 ID=cds-WP_004246960.1;Parent=gene-L2557_RS01315;Dbxref=GenBank:WP_004246960.1;Name=WP_004246960.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsS;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148791.1;locus_tag=L2557_RS01315;product=30S ribosomal protein S19;protein_id=WP_004246960.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 21100 21924 . - . ID=gene-L2557_RS01320;Name=rplB;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=L2557_RS01320 NZ_JAIKUA010000014.1 Protein Homology CDS 21100 21924 . - 0 ID=cds-WP_099660734.1;Parent=gene-L2557_RS01320;Dbxref=GenBank:WP_099660734.1;Name=WP_099660734.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0016740,GO:0015934;gbkey=CDS;gene=rplB;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA,transferase activity|0016740||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002213425.1;locus_tag=L2557_RS01320;product=50S ribosomal protein L2;protein_id=WP_099660734.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 21944 22246 . - . ID=gene-L2557_RS01325;Name=rplW;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=L2557_RS01325 NZ_JAIKUA010000014.1 Protein Homology CDS 21944 22246 . - 0 ID=cds-WP_004246962.1;Parent=gene-L2557_RS01325;Dbxref=GenBank:WP_004246962.1;Name=WP_004246962.1;gbkey=CDS;gene=rplW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007891652.1;locus_tag=L2557_RS01325;product=50S ribosomal protein L23;protein_id=WP_004246962.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 22243 22848 . - . ID=gene-L2557_RS01330;Name=rplD;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=L2557_RS01330 NZ_JAIKUA010000014.1 Protein Homology CDS 22243 22848 . - 0 ID=cds-WP_023583466.1;Parent=gene-L2557_RS01330;Dbxref=GenBank:WP_023583466.1;Name=WP_023583466.1;Ontology_term=GO:0006412,GO:0003735,GO:0022625;gbkey=CDS;gene=rplD;go_component=cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304939.1;locus_tag=L2557_RS01330;product=50S ribosomal protein L4;protein_id=WP_023583466.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 22865 23494 . - . ID=gene-L2557_RS01335;Name=rplC;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=L2557_RS01335 NZ_JAIKUA010000014.1 Protein Homology CDS 22865 23494 . - 0 ID=cds-WP_023583465.1;Parent=gene-L2557_RS01335;Dbxref=GenBank:WP_023583465.1;Name=WP_023583465.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplC;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000579825.1;locus_tag=L2557_RS01335;product=50S ribosomal protein L3;protein_id=WP_023583465.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 23527 23838 . - . ID=gene-L2557_RS01340;Name=rpsJ;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;locus_tag=L2557_RS01340 NZ_JAIKUA010000014.1 Protein Homology CDS 23527 23838 . - 0 ID=cds-WP_001181005.1;Parent=gene-L2557_RS01340;Dbxref=GenBank:WP_001181005.1;Name=WP_001181005.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsJ;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014268624.1;locus_tag=L2557_RS01340;product=30S ribosomal protein S10;protein_id=WP_001181005.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 24189 24662 . - . ID=gene-L2557_RS01345;Name=bfr;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=L2557_RS01345 NZ_JAIKUA010000014.1 Protein Homology CDS 24189 24662 . - 0 ID=cds-WP_075674372.1;Parent=gene-L2557_RS01345;Dbxref=GenBank:WP_075674372.1;Name=WP_075674372.1;Ontology_term=GO:0006879,GO:0004322,GO:0008199;gbkey=CDS;gene=bfr;go_function=ferroxidase activity|0004322||IEA,ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010304949.1;locus_tag=L2557_RS01345;product=bacterioferritin;protein_id=WP_075674372.1;transl_table=11 NZ_JAIKUA010000014.1 RefSeq gene 24740 24937 . - . ID=gene-L2557_RS01350;Name=bfd;gbkey=Gene;gene=bfd;gene_biotype=protein_coding;locus_tag=L2557_RS01350 NZ_JAIKUA010000014.1 Protein Homology CDS 24740 24937 . - 0 ID=cds-WP_075674371.1;Parent=gene-L2557_RS01350;Dbxref=GenBank:WP_075674371.1;Name=WP_075674371.1;gbkey=CDS;gene=bfd;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017900608.1;locus_tag=L2557_RS01350;product=bacterioferritin-associated ferredoxin;protein_id=WP_075674371.1;transl_table=11 ##sequence-region NZ_JAIKUA010000140.1 1 12472 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000140.1 RefSeq region 1 12472 . + . ID=NZ_JAIKUA010000140.1:1..12472;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000140.1 RefSeq gene 53 604 . - . ID=gene-L2557_RS09780;Name=L2557_RS09780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09780 NZ_JAIKUA010000140.1 Protein Homology CDS 53 604 . - 0 ID=cds-WP_075673131.1;Parent=gene-L2557_RS09780;Dbxref=GenBank:WP_075673131.1;Name=WP_075673131.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244671.1;locus_tag=L2557_RS09780;product=cell division protein ZapC;protein_id=WP_075673131.1;transl_table=11 NZ_JAIKUA010000140.1 RefSeq gene 824 1834 . - . ID=gene-L2557_RS09785;Name=pyrD;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=L2557_RS09785 NZ_JAIKUA010000140.1 Protein Homology CDS 824 1834 . - 0 ID=cds-WP_036912193.1;Parent=gene-L2557_RS09785;Dbxref=GenBank:WP_036912193.1;Name=WP_036912193.1;Ontology_term=GO:0006222,GO:0004152,GO:0016020;gbkey=CDS;gene=pyrD;go_component=membrane|0016020||IEA;go_function=dihydroorotate dehydrogenase activity|0004152||IEA;go_process=UMP biosynthetic process|0006222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251935.1;locus_tag=L2557_RS09785;product=quinone-dependent dihydroorotate dehydrogenase;protein_id=WP_036912193.1;transl_table=11 NZ_JAIKUA010000140.1 RefSeq gene 2039 4654 . - . ID=gene-L2557_RS09790;Name=pepN;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=L2557_RS09790 NZ_JAIKUA010000140.1 Protein Homology CDS 2039 4654 . - 0 ID=cds-WP_099659759.1;Parent=gene-L2557_RS09790;Dbxref=GenBank:WP_099659759.1;Name=WP_099659759.1;Ontology_term=GO:0006508,GO:0004177,GO:0008237,GO:0008270;gbkey=CDS;gene=pepN;go_function=aminopeptidase activity|0004177||IEA,metallopeptidase activity|0008237||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367735.1;locus_tag=L2557_RS09790;product=aminopeptidase N;protein_id=WP_099659759.1;transl_table=11 NZ_JAIKUA010000140.1 RefSeq gene 4995 6209 . + . ID=gene-L2557_RS09795;Name=pncB;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=L2557_RS09795 NZ_JAIKUA010000140.1 Protein Homology CDS 4995 6209 . + 0 ID=cds-WP_075673129.1;Parent=gene-L2557_RS09795;Dbxref=GenBank:WP_075673129.1;Name=WP_075673129.1;Ontology_term=GO:0009435,GO:0004516;gbkey=CDS;gene=pncB;go_function=nicotinate phosphoribosyltransferase activity|0004516||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244666.1;locus_tag=L2557_RS09795;product=nicotinate phosphoribosyltransferase;protein_id=WP_075673129.1;transl_table=11 NZ_JAIKUA010000140.1 RefSeq gene 6478 7878 . + . ID=gene-L2557_RS09800;Name=asnS;gbkey=Gene;gene=asnS;gene_biotype=protein_coding;locus_tag=L2557_RS09800 NZ_JAIKUA010000140.1 Protein Homology CDS 6478 7878 . + 0 ID=cds-WP_075673128.1;Parent=gene-L2557_RS09800;Dbxref=GenBank:WP_075673128.1;Name=WP_075673128.1;Ontology_term=GO:0006421,GO:0004816,GO:0005524;gbkey=CDS;gene=asnS;go_function=asparagine-tRNA ligase activity|0004816||IEA,ATP binding|0005524||IEA;go_process=asparaginyl-tRNA aminoacylation|0006421||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415450.1;locus_tag=L2557_RS09800;product=asparagine--tRNA ligase;protein_id=WP_075673128.1;transl_table=11 NZ_JAIKUA010000140.1 RefSeq gene 8219 9370 . + . ID=gene-L2557_RS09805;Name=L2557_RS09805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09805 NZ_JAIKUA010000140.1 Protein Homology CDS 8219 9370 . + 0 ID=cds-WP_099659760.1;Parent=gene-L2557_RS09805;Dbxref=GenBank:WP_099659760.1;Name=WP_099659760.1;Ontology_term=GO:0015288,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251939.1;locus_tag=L2557_RS09805;product=porin;protein_id=WP_099659760.1;transl_table=11 NZ_JAIKUA010000140.1 RefSeq gene 9790 10980 . + . ID=gene-L2557_RS09810;Name=L2557_RS09810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09810 NZ_JAIKUA010000140.1 Protein Homology CDS 9790 10980 . + 0 ID=cds-WP_075673126.1;Parent=gene-L2557_RS09810;Dbxref=GenBank:WP_075673126.1;Name=WP_075673126.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816042.1;locus_tag=L2557_RS09810;product=amino acid aminotransferase;protein_id=WP_075673126.1;transl_table=11 NZ_JAIKUA010000140.1 RefSeq gene 11136 11786 . - . ID=gene-L2557_RS09815;Name=L2557_RS09815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09815 NZ_JAIKUA010000140.1 Protein Homology CDS 11136 11786 . - 0 ID=cds-WP_099659761.1;Parent=gene-L2557_RS09815;Dbxref=GenBank:WP_099659761.1;Name=WP_099659761.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247640.1;locus_tag=L2557_RS09815;product=MBL fold metallo-hydrolase;protein_id=WP_099659761.1;transl_table=11 NZ_JAIKUA010000140.1 RefSeq gene 11824 12372 . - . ID=gene-L2557_RS09820;Name=L2557_RS09820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09820 NZ_JAIKUA010000140.1 Protein Homology CDS 11824 12372 . - 0 ID=cds-WP_099659762.1;Parent=gene-L2557_RS09820;Dbxref=GenBank:WP_099659762.1;Name=WP_099659762.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244605.1;locus_tag=L2557_RS09820;product=YcbK family protein;protein_id=WP_099659762.1;transl_table=11 ##sequence-region NZ_JAIKUA010000141.1 1 5601 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000141.1 RefSeq region 1 5601 . + . ID=NZ_JAIKUA010000141.1:1..5601;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000141.1 RefSeq gene 314 967 . + . ID=gene-L2557_RS09825;Name=can;gbkey=Gene;gene=can;gene_biotype=protein_coding;locus_tag=L2557_RS09825 NZ_JAIKUA010000141.1 Protein Homology CDS 314 967 . + 0 ID=cds-WP_075674122.1;Parent=gene-L2557_RS09825;Dbxref=GenBank:WP_075674122.1;Name=WP_075674122.1;Ontology_term=GO:0015976,GO:0004089,GO:0008270;gbkey=CDS;gene=can;go_function=carbonate dehydratase activity|0004089||IEA,zinc ion binding|0008270||IEA;go_process=carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534997.1;locus_tag=L2557_RS09825;product=carbonate dehydratase;protein_id=WP_075674122.1;transl_table=11 NZ_JAIKUA010000141.1 RefSeq gene 1040 1582 . - . ID=gene-L2557_RS09830;Name=hpt;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=L2557_RS09830 NZ_JAIKUA010000141.1 Protein Homology CDS 1040 1582 . - 0 ID=cds-WP_036932823.1;Parent=gene-L2557_RS09830;Dbxref=GenBank:WP_036932823.1;Name=WP_036932823.1;Ontology_term=GO:0006166;gbkey=CDS;gene=hpt;go_process=purine ribonucleoside salvage|0006166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706234.1;locus_tag=L2557_RS09830;product=hypoxanthine phosphoribosyltransferase;protein_id=WP_036932823.1;transl_table=11 NZ_JAIKUA010000141.1 RefSeq gene 1742 3322 . - . ID=gene-L2557_RS09835;Name=cueO;gbkey=Gene;gene=cueO;gene_biotype=protein_coding;locus_tag=L2557_RS09835 NZ_JAIKUA010000141.1 Protein Homology CDS 1742 3322 . - 0 ID=cds-WP_099659947.1;Parent=gene-L2557_RS09835;Dbxref=GenBank:WP_099659947.1;Name=WP_099659947.1;Ontology_term=GO:0005507,GO:0016491;gbkey=CDS;gene=cueO;go_function=copper ion binding|0005507||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245040.1;locus_tag=L2557_RS09835;product=multicopper oxidase CueO;protein_id=WP_099659947.1;transl_table=11 NZ_JAIKUA010000141.1 RefSeq gene 3536 3886 . + . ID=gene-L2557_RS09840;Name=L2557_RS09840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09840 NZ_JAIKUA010000141.1 Protein Homology CDS 3536 3886 . + 0 ID=cds-WP_075674120.1;Parent=gene-L2557_RS09840;Dbxref=GenBank:WP_075674120.1;Name=WP_075674120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245041.1;locus_tag=L2557_RS09840;product=YacC family pilotin-like protein;protein_id=WP_075674120.1;transl_table=11 NZ_JAIKUA010000141.1 RefSeq gene 4010 5065 . - . ID=gene-L2557_RS09845;Name=L2557_RS09845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09845 NZ_JAIKUA010000141.1 Protein Homology CDS 4010 5065 . - 0 ID=cds-WP_099659948.1;Parent=gene-L2557_RS09845;Dbxref=GenBank:WP_099659948.1;Name=WP_099659948.1;Ontology_term=GO:0010468,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=regulation of gene expression|0010468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628283.1;locus_tag=L2557_RS09845;product=AbrB family transcriptional regulator;protein_id=WP_099659948.1;transl_table=11 NZ_JAIKUA010000141.1 RefSeq gene 5177 5587 . + . ID=gene-L2557_RS09850;Name=L2557_RS09850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09850 NZ_JAIKUA010000141.1 Protein Homology CDS 5177 5587 . + 0 ID=cds-WP_099659949.1;Parent=gene-L2557_RS09850;Dbxref=GenBank:WP_099659949.1;Name=WP_099659949.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245043.1;locus_tag=L2557_RS09850;product=GNAT family N-acetyltransferase;protein_id=WP_099659949.1;transl_table=11 ##sequence-region NZ_JAIKUA010000142.1 1 13545 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000142.1 RefSeq region 1 13545 . + . ID=NZ_JAIKUA010000142.1:1..13545;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000142.1 RefSeq gene 37 1455 . - . ID=gene-L2557_RS09855;Name=L2557_RS09855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09855 NZ_JAIKUA010000142.1 Protein Homology CDS 37 1455 . - 0 ID=cds-WP_235410010.1;Parent=gene-L2557_RS09855;Dbxref=GenBank:WP_235410010.1;Name=WP_235410010.1;Ontology_term=GO:0006269,GO:0003677,GO:0003678,GO:0005524,GO:0016887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658123.1;locus_tag=L2557_RS09855;product=replicative DNA helicase;protein_id=WP_235410010.1;transl_table=11 NZ_JAIKUA010000142.1 RefSeq gene 1445 2275 . - . ID=gene-L2557_RS09860;Name=L2557_RS09860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09860 NZ_JAIKUA010000142.1 Protein Homology CDS 1445 2275 . - 0 ID=cds-WP_235410011.1;Parent=gene-L2557_RS09860;Dbxref=GenBank:WP_235410011.1;Name=WP_235410011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001247848.1;locus_tag=L2557_RS09860;product=replication protein;protein_id=WP_235410011.1;transl_table=11 NZ_JAIKUA010000142.1 RefSeq gene 2277 2501 . - . ID=gene-L2557_RS09865;Name=L2557_RS09865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09865 NZ_JAIKUA010000142.1 Protein Homology CDS 2277 2501 . - 0 ID=cds-WP_103004846.1;Parent=gene-L2557_RS09865;Dbxref=GenBank:WP_103004846.1;Name=WP_103004846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814777.1;locus_tag=L2557_RS09865;product=hypothetical protein;protein_id=WP_103004846.1;transl_table=11 NZ_JAIKUA010000142.1 RefSeq gene 2519 2974 . - . ID=gene-L2557_RS09870;Name=L2557_RS09870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09870 NZ_JAIKUA010000142.1 Protein Homology CDS 2519 2974 . - 0 ID=cds-WP_196544813.1;Parent=gene-L2557_RS09870;Dbxref=GenBank:WP_196544813.1;Name=WP_196544813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250531.1;locus_tag=L2557_RS09870;product=toxin YdaT family protein;protein_id=WP_196544813.1;transl_table=11 NZ_JAIKUA010000142.1 RefSeq gene 3023 3268 . - . ID=gene-L2557_RS09875;Name=L2557_RS09875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09875 NZ_JAIKUA010000142.1 Protein Homology CDS 3023 3268 . - 0 ID=cds-WP_196729259.1;Parent=gene-L2557_RS09875;Dbxref=GenBank:WP_196729259.1;Name=WP_196729259.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658119.1;locus_tag=L2557_RS09875;product=transcriptional regulator;protein_id=WP_196729259.1;transl_table=11 NZ_JAIKUA010000142.1 RefSeq gene 3374 4066 . + . ID=gene-L2557_RS09880;Name=L2557_RS09880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09880 NZ_JAIKUA010000142.1 Protein Homology CDS 3374 4066 . + 0 ID=cds-WP_235410012.1;Parent=gene-L2557_RS09880;Dbxref=GenBank:WP_235410012.1;Name=WP_235410012.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658118.1;locus_tag=L2557_RS09880;product=S24 family peptidase;protein_id=WP_235410012.1;transl_table=11 NZ_JAIKUA010000142.1 RefSeq gene 4468 4800 . + . ID=gene-L2557_RS09885;Name=L2557_RS09885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09885 NZ_JAIKUA010000142.1 Protein Homology CDS 4468 4800 . + 0 ID=cds-WP_161706907.1;Parent=gene-L2557_RS09885;Dbxref=GenBank:WP_161706907.1;Name=WP_161706907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250525.1;locus_tag=L2557_RS09885;product=hypothetical protein;protein_id=WP_161706907.1;transl_table=11 NZ_JAIKUA010000142.1 RefSeq gene 4812 5096 . + . ID=gene-L2557_RS09890;Name=L2557_RS09890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09890 NZ_JAIKUA010000142.1 GeneMarkS-2+ CDS 4812 5096 . + 0 ID=cds-WP_049213719.1;Parent=gene-L2557_RS09890;Dbxref=GenBank:WP_049213719.1;Name=WP_049213719.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS09890;product=hypothetical protein;protein_id=WP_049213719.1;transl_table=11 NZ_JAIKUA010000142.1 RefSeq gene 5109 7076 . + . ID=gene-L2557_RS09895;Name=L2557_RS09895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09895 NZ_JAIKUA010000142.1 Protein Homology CDS 5109 7076 . + 0 ID=cds-WP_235410013.1;Parent=gene-L2557_RS09895;Dbxref=GenBank:WP_235410013.1;Name=WP_235410013.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660856.1;locus_tag=L2557_RS09895;product=hypothetical protein;protein_id=WP_235410013.1;transl_table=11 NZ_JAIKUA010000142.1 RefSeq gene 7076 7576 . + . ID=gene-L2557_RS09900;Name=L2557_RS09900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09900 NZ_JAIKUA010000142.1 Protein Homology CDS 7076 7576 . + 0 ID=cds-WP_235410014.1;Parent=gene-L2557_RS09900;Dbxref=GenBank:WP_235410014.1;Name=WP_235410014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660855.1;locus_tag=L2557_RS09900;product=siphovirus Gp157 family protein;protein_id=WP_235410014.1;transl_table=11 NZ_JAIKUA010000142.1 RefSeq gene 7624 7803 . + . ID=gene-L2557_RS09905;Name=L2557_RS09905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09905 NZ_JAIKUA010000142.1 Protein Homology CDS 7624 7803 . + 0 ID=cds-WP_049199463.1;Parent=gene-L2557_RS09905;Dbxref=GenBank:WP_049199463.1;Name=WP_049199463.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250516.1;locus_tag=L2557_RS09905;product=hypothetical protein;protein_id=WP_049199463.1;transl_table=11 NZ_JAIKUA010000142.1 RefSeq gene 7832 8002 . + . ID=gene-L2557_RS09910;Name=L2557_RS09910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09910 NZ_JAIKUA010000142.1 Protein Homology CDS 7832 8002 . + 0 ID=cds-WP_196563787.1;Parent=gene-L2557_RS09910;Dbxref=GenBank:WP_196563787.1;Name=WP_196563787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250514.1;locus_tag=L2557_RS09910;product=hypothetical protein;protein_id=WP_196563787.1;transl_table=11 NZ_JAIKUA010000142.1 RefSeq gene 8417 8629 . + . ID=gene-L2557_RS09915;Name=L2557_RS09915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09915 NZ_JAIKUA010000142.1 Protein Homology CDS 8417 8629 . + 0 ID=cds-WP_099659432.1;Parent=gene-L2557_RS09915;Dbxref=GenBank:WP_099659432.1;Name=WP_099659432.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147166.1;locus_tag=L2557_RS09915;product=hypothetical protein;protein_id=WP_099659432.1;transl_table=11 NZ_JAIKUA010000142.1 RefSeq gene 8631 9806 . + . ID=gene-L2557_RS09920;Name=L2557_RS09920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09920 NZ_JAIKUA010000142.1 Protein Homology CDS 8631 9806 . + 0 ID=cds-WP_235410015.1;Parent=gene-L2557_RS09920;Dbxref=GenBank:WP_235410015.1;Name=WP_235410015.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013813849.1;locus_tag=L2557_RS09920;product=tyrosine-type recombinase/integrase;protein_id=WP_235410015.1;transl_table=11 NZ_JAIKUA010000142.1 RefSeq gene 9877 10653 . - . ID=gene-L2557_RS09925;Name=L2557_RS09925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09925 NZ_JAIKUA010000142.1 GeneMarkS-2+ CDS 9877 10653 . - 0 ID=cds-WP_235410016.1;Parent=gene-L2557_RS09925;Dbxref=GenBank:WP_235410016.1;Name=WP_235410016.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS09925;product=hypothetical protein;protein_id=WP_235410016.1;transl_table=11 NZ_JAIKUA010000142.1 RefSeq gene 10671 11720 . - . ID=gene-L2557_RS09930;Name=L2557_RS09930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09930 NZ_JAIKUA010000142.1 GeneMarkS-2+ CDS 10671 11720 . - 0 ID=cds-WP_235410017.1;Parent=gene-L2557_RS09930;Dbxref=GenBank:WP_235410017.1;Name=WP_235410017.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS09930;product=hypothetical protein;protein_id=WP_235410017.1;transl_table=11 NZ_JAIKUA010000142.1 RefSeq gene 12882 13400 . + . ID=gene-L2557_RS09935;Name=L2557_RS09935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09935 NZ_JAIKUA010000142.1 Protein Homology CDS 12882 13400 . + 0 ID=cds-WP_075673592.1;Parent=gene-L2557_RS09935;Dbxref=GenBank:WP_075673592.1;Name=WP_075673592.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000115885.1;locus_tag=L2557_RS09935;product=ClbS/DfsB family four-helix bundle protein;protein_id=WP_075673592.1;transl_table=11 ##sequence-region NZ_JAIKUA010000143.1 1 33113 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000143.1 RefSeq region 1 33113 . + . ID=NZ_JAIKUA010000143.1:1..33113;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000143.1 RefSeq gene 110 769 . - . ID=gene-L2557_RS09940;Name=L2557_RS09940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09940 NZ_JAIKUA010000143.1 Protein Homology CDS 110 769 . - 0 ID=cds-WP_099660043.1;Parent=gene-L2557_RS09940;Dbxref=GenBank:WP_099660043.1;Name=WP_099660043.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245441.1;locus_tag=L2557_RS09940;product=GntR family transcriptional regulator;protein_id=WP_099660043.1;transl_table=11 NZ_JAIKUA010000143.1 RefSeq gene 1238 2488 . + . ID=gene-L2557_RS09945;Name=L2557_RS09945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09945 NZ_JAIKUA010000143.1 Protein Homology CDS 1238 2488 . + 0 ID=cds-WP_075672923.1;Parent=gene-L2557_RS09945;Dbxref=GenBank:WP_075672923.1;Name=WP_075672923.1;Ontology_term=GO:0030001,GO:0046872,GO:0046873,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=metal ion binding|0046872||IEA,metal ion transmembrane transporter activity|0046873||IEA;go_process=metal ion transport|0030001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245440.1;locus_tag=L2557_RS09945;product=NRAMP family divalent metal transporter;protein_id=WP_075672923.1;transl_table=11 NZ_JAIKUA010000143.1 RefSeq gene 2502 3293 . + . ID=gene-L2557_RS09950;Name=L2557_RS09950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09950 NZ_JAIKUA010000143.1 Protein Homology CDS 2502 3293 . + 0 ID=cds-WP_099660049.1;Parent=gene-L2557_RS09950;Dbxref=GenBank:WP_099660049.1;Name=WP_099660049.1;Ontology_term=GO:0005975,GO:0005524,GO:0016810,GO:0017168;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,5-oxoprolinase (ATP-hydrolyzing) activity|0017168||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660378.1;locus_tag=L2557_RS09950;product=LamB/YcsF family protein;protein_id=WP_099660049.1;transl_table=11 NZ_JAIKUA010000143.1 RefSeq gene 3290 4096 . + . ID=gene-L2557_RS09955;Name=L2557_RS09955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09955 NZ_JAIKUA010000143.1 Protein Homology CDS 3290 4096 . + 0 ID=cds-WP_156733004.1;Parent=gene-L2557_RS09955;Dbxref=GenBank:WP_156733004.1;Name=WP_156733004.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920961.1;locus_tag=L2557_RS09955;product=putative hydro-lyase;protein_id=WP_156733004.1;transl_table=11 NZ_JAIKUA010000143.1 RefSeq gene 4111 5688 . + . ID=gene-L2557_RS09960;Name=L2557_RS09960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09960 NZ_JAIKUA010000143.1 Protein Homology CDS 4111 5688 . + 0 ID=cds-WP_235410018.1;Parent=gene-L2557_RS09960;Dbxref=GenBank:WP_235410018.1;Name=WP_235410018.1;Ontology_term=GO:0005524,GO:0016787;gbkey=CDS;go_function=ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248855.1;locus_tag=L2557_RS09960;product=5-oxoprolinase subunit B/C family protein;protein_id=WP_235410018.1;transl_table=11 NZ_JAIKUA010000143.1 RefSeq gene 5705 7450 . + . ID=gene-L2557_RS09965;Name=L2557_RS09965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09965 NZ_JAIKUA010000143.1 Protein Homology CDS 5705 7450 . + 0 ID=cds-WP_099660040.1;Parent=gene-L2557_RS09965;Dbxref=GenBank:WP_099660040.1;Name=WP_099660040.1;Ontology_term=GO:0004075,GO:0005524,GO:0016421,GO:0046872;gbkey=CDS;go_function=biotin carboxylase activity|0004075||IEA,ATP binding|0005524||IEA,CoA carboxylase activity|0016421||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827247.1;locus_tag=L2557_RS09965;product=acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha;protein_id=WP_099660040.1;transl_table=11 NZ_JAIKUA010000143.1 RefSeq gene 7654 8451 . + . ID=gene-L2557_RS09970;Name=L2557_RS09970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09970 NZ_JAIKUA010000143.1 Protein Homology CDS 7654 8451 . + 0 ID=cds-WP_075672927.1;Parent=gene-L2557_RS09970;Dbxref=GenBank:WP_075672927.1;Name=WP_075672927.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245436.1;locus_tag=L2557_RS09970;product=sulfite exporter TauE/SafE family protein;protein_id=WP_075672927.1;transl_table=11 NZ_JAIKUA010000143.1 RefSeq gene 8555 8785 . + . ID=gene-L2557_RS09975;Name=L2557_RS09975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09975 NZ_JAIKUA010000143.1 Protein Homology CDS 8555 8785 . + 0 ID=cds-WP_075672928.1;Parent=gene-L2557_RS09975;Dbxref=GenBank:WP_075672928.1;Name=WP_075672928.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245434.1;locus_tag=L2557_RS09975;product=hypothetical protein;protein_id=WP_075672928.1;transl_table=11 NZ_JAIKUA010000143.1 RefSeq gene 8824 9264 . - . ID=gene-L2557_RS09980;Name=L2557_RS09980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09980 NZ_JAIKUA010000143.1 Protein Homology CDS 8824 9264 . - 0 ID=cds-WP_088493886.1;Parent=gene-L2557_RS09980;Dbxref=GenBank:WP_088493886.1;Name=WP_088493886.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245432.1;locus_tag=L2557_RS09980;product=PACE efflux transporter;protein_id=WP_088493886.1;transl_table=11 NZ_JAIKUA010000143.1 RefSeq gene 9375 10277 . + . ID=gene-L2557_RS09985;Name=L2557_RS09985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS09985 NZ_JAIKUA010000143.1 Protein Homology CDS 9375 10277 . + 0 ID=cds-WP_075672930.1;Parent=gene-L2557_RS09985;Dbxref=GenBank:WP_075672930.1;Name=WP_075672930.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248858.1;locus_tag=L2557_RS09985;product=LysR family transcriptional regulator;protein_id=WP_075672930.1;transl_table=11 NZ_JAIKUA010000143.1 RefSeq gene 10274 10927 . - . ID=gene-L2557_RS09990;Name=narL;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=L2557_RS09990 NZ_JAIKUA010000143.1 Protein Homology CDS 10274 10927 . - 0 ID=cds-WP_082239485.1;Parent=gene-L2557_RS09990;Dbxref=GenBank:WP_082239485.1;Name=WP_082239485.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=narL;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368806.1;locus_tag=L2557_RS09990;product=two-component system response regulator NarL;protein_id=WP_082239485.1;transl_table=11 NZ_JAIKUA010000143.1 RefSeq gene 10953 12758 . - . ID=gene-L2557_RS09995;Name=narX;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=L2557_RS09995 NZ_JAIKUA010000143.1 Protein Homology CDS 10953 12758 . - 0 ID=cds-WP_075672931.1;Parent=gene-L2557_RS09995;Dbxref=GenBank:WP_075672931.1;Name=WP_075672931.1;Ontology_term=GO:0000160,GO:0000155,GO:0046983,GO:0016020;gbkey=CDS;gene=narX;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein dimerization activity|0046983||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368807.1;locus_tag=L2557_RS09995;product=nitrate/nitrite two-component system sensor histidine kinase NarX;protein_id=WP_075672931.1;transl_table=11 NZ_JAIKUA010000143.1 RefSeq gene 13056 14450 . + . ID=gene-L2557_RS10000;Name=L2557_RS10000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10000 NZ_JAIKUA010000143.1 Protein Homology CDS 13056 14450 . + 0 ID=cds-WP_156733007.1;Parent=gene-L2557_RS10000;Dbxref=GenBank:WP_156733007.1;Name=WP_156733007.1;Ontology_term=GO:0015706,GO:0015707,GO:0015112,GO:0015113,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nitrate transmembrane transporter activity|0015112||IEA,nitrite transmembrane transporter activity|0015113||IEA;go_process=nitrate transmembrane transport|0015706||IEA,nitrite transport|0015707||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245428.1;locus_tag=L2557_RS10000;product=NarK family nitrate/nitrite MFS transporter;protein_id=WP_156733007.1;transl_table=11 NZ_JAIKUA010000143.1 RefSeq gene 14503 18264 . + . ID=gene-L2557_RS10005;Name=L2557_RS10005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10005 NZ_JAIKUA010000143.1 Protein Homology CDS 14503 18264 . + 0 ID=cds-WP_075672933.1;Parent=gene-L2557_RS10005;Dbxref=GenBank:WP_075672933.1;Name=WP_075672933.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245427.1;locus_tag=L2557_RS10005;product=nitrate reductase subunit alpha;protein_id=WP_075672933.1;transl_table=11 NZ_JAIKUA010000143.1 RefSeq gene 18264 19817 . + . ID=gene-L2557_RS10010;Name=narH;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=L2557_RS10010 NZ_JAIKUA010000143.1 Protein Homology CDS 18264 19817 . + 0 ID=cds-WP_075672934.1;Parent=gene-L2557_RS10010;Dbxref=GenBank:WP_075672934.1;Name=WP_075672934.1;Ontology_term=GO:0042126,GO:0008940,GO:0009325;gbkey=CDS;gene=narH;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=nitrate metabolic process|0042126||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245426.1;locus_tag=L2557_RS10010;product=nitrate reductase subunit beta;protein_id=WP_075672934.1;transl_table=11 NZ_JAIKUA010000143.1 RefSeq gene 19817 20542 . + . ID=gene-L2557_RS10015;Name=narJ;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=L2557_RS10015 NZ_JAIKUA010000143.1 Protein Homology CDS 19817 20542 . + 0 ID=cds-WP_075672935.1;Parent=gene-L2557_RS10015;Dbxref=GenBank:WP_075672935.1;Name=WP_075672935.1;Ontology_term=GO:0051131,GO:0051082;gbkey=CDS;gene=narJ;go_function=unfolded protein binding|0051082||IEA;go_process=chaperone-mediated protein complex assembly|0051131||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015840482.1;locus_tag=L2557_RS10015;product=nitrate reductase molybdenum cofactor assembly chaperone;protein_id=WP_075672935.1;transl_table=11 NZ_JAIKUA010000143.1 RefSeq gene 20539 21216 . + . ID=gene-L2557_RS10020;Name=narI;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=L2557_RS10020 NZ_JAIKUA010000143.1 Protein Homology CDS 20539 21216 . + 0 ID=cds-WP_075672936.1;Parent=gene-L2557_RS10020;Dbxref=GenBank:WP_075672936.1;Name=WP_075672936.1;Ontology_term=GO:0019645,GO:0008940,GO:0009325;gbkey=CDS;gene=narI;go_component=nitrate reductase complex|0009325||IEA;go_function=nitrate reductase activity|0008940||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460717.1;locus_tag=L2557_RS10020;product=respiratory nitrate reductase subunit gamma;protein_id=WP_075672936.1;transl_table=11 NZ_JAIKUA010000143.1 RefSeq gene 21595 22218 . + . ID=gene-L2557_RS10025;Name=ycaC;gbkey=Gene;gene=ycaC;gene_biotype=protein_coding;locus_tag=L2557_RS10025 NZ_JAIKUA010000143.1 Protein Homology CDS 21595 22218 . + 0 ID=cds-WP_075672937.1;Parent=gene-L2557_RS10025;Dbxref=GenBank:WP_075672937.1;Name=WP_075672937.1;Ontology_term=GO:0016787;gbkey=CDS;gene=ycaC;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015366381.1;locus_tag=L2557_RS10025;product=isochorismate family cysteine hydrolase YcaC;protein_id=WP_075672937.1;transl_table=11 NZ_JAIKUA010000143.1 RefSeq gene 22341 23537 . + . ID=gene-L2557_RS10030;Name=L2557_RS10030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10030 NZ_JAIKUA010000143.1 Protein Homology CDS 22341 23537 . + 0 ID=cds-WP_075672938.1;Parent=gene-L2557_RS10030;Dbxref=GenBank:WP_075672938.1;Name=WP_075672938.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460579.1;locus_tag=L2557_RS10030;product=lactate oxidase;protein_id=WP_075672938.1;transl_table=11 NZ_JAIKUA010000143.1 RefSeq gene 23619 25310 . - . ID=gene-L2557_RS10035;Name=eptB;gbkey=Gene;gene=eptB;gene_biotype=protein_coding;locus_tag=L2557_RS10035 NZ_JAIKUA010000143.1 Protein Homology CDS 23619 25310 . - 0 ID=cds-WP_164530293.1;Parent=gene-L2557_RS10035;Dbxref=GenBank:WP_164530293.1;Name=WP_164530293.1;Ontology_term=GO:0008484;gbkey=CDS;gene=eptB;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248863.1;locus_tag=L2557_RS10035;product=kdo(2)-lipid A phosphoethanolamine 7''-transferase;protein_id=WP_164530293.1;transl_table=11 NZ_JAIKUA010000143.1 RefSeq gene 25842 27986 . + . ID=gene-L2557_RS10040;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=L2557_RS10040 NZ_JAIKUA010000143.1 Protein Homology CDS 25842 27986 . + 0 ID=cds-WP_098941268.1;Parent=gene-L2557_RS10040;Dbxref=GenBank:WP_098941268.1;Name=WP_098941268.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015872499.1;locus_tag=L2557_RS10040;product=formate dehydrogenase subunit alpha;protein_id=WP_098941268.1;transl_except=(pos:26259..26261%2Caa:Sec);transl_table=11 NZ_JAIKUA010000143.1 RefSeq gene 28287 29864 . + . ID=gene-L2557_RS10045;Name=L2557_RS10045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10045 NZ_JAIKUA010000143.1 Protein Homology CDS 28287 29864 . + 0 ID=cds-WP_099660038.1;Parent=gene-L2557_RS10045;Dbxref=GenBank:WP_099660038.1;Name=WP_099660038.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006176679.1;locus_tag=L2557_RS10045;product=PTS transporter subunit EIIC;protein_id=WP_099660038.1;transl_table=11 NZ_JAIKUA010000143.1 RefSeq gene 29879 31240 . + . ID=gene-L2557_RS10050;Name=L2557_RS10050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10050 NZ_JAIKUA010000143.1 Protein Homology CDS 29879 31240 . + 0 ID=cds-WP_099660037.1;Parent=gene-L2557_RS10050;Dbxref=GenBank:WP_099660037.1;Name=WP_099660037.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007370814.1;locus_tag=L2557_RS10050;product=6-phospho-alpha-glucosidase;protein_id=WP_099660037.1;transl_table=11 NZ_JAIKUA010000143.1 RefSeq gene 31349 32125 . + . ID=gene-L2557_RS10055;Name=L2557_RS10055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10055 NZ_JAIKUA010000143.1 Protein Homology CDS 31349 32125 . + 0 ID=cds-WP_075672943.1;Parent=gene-L2557_RS10055;Dbxref=GenBank:WP_075672943.1;Name=WP_075672943.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015742109.1;locus_tag=L2557_RS10055;product=MurR/RpiR family transcriptional regulator;protein_id=WP_075672943.1;transl_table=11 NZ_JAIKUA010000143.1 RefSeq gene 32148 33035 . - . ID=gene-L2557_RS10060;Name=L2557_RS10060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10060 NZ_JAIKUA010000143.1 Protein Homology CDS 32148 33035 . - 0 ID=cds-WP_156733008.1;Parent=gene-L2557_RS10060;Dbxref=GenBank:WP_156733008.1;Name=WP_156733008.1;Ontology_term=GO:0051213;gbkey=CDS;go_function=dioxygenase activity|0051213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628202.1;locus_tag=L2557_RS10060;product=2OG-Fe dioxygenase family protein;protein_id=WP_156733008.1;transl_table=11 ##sequence-region NZ_JAIKUA010000144.1 1 8364 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000144.1 RefSeq region 1 8364 . + . ID=NZ_JAIKUA010000144.1:1..8364;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000144.1 RefSeq gene 442 1674 . - . ID=gene-L2557_RS10065;Name=nagC;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;gene_synonym=nagR;locus_tag=L2557_RS10065 NZ_JAIKUA010000144.1 Protein Homology CDS 442 1674 . - 0 ID=cds-WP_088493435.1;Parent=gene-L2557_RS10065;Dbxref=GenBank:WP_088493435.1;Name=WP_088493435.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=nagC;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246020.1;locus_tag=L2557_RS10065;product=DNA-binding transcriptional regulator NagC;protein_id=WP_088493435.1;transl_table=11 NZ_JAIKUA010000144.1 RefSeq gene 1688 2848 . - . ID=gene-L2557_RS10070;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=L2557_RS10070 NZ_JAIKUA010000144.1 Protein Homology CDS 1688 2848 . - 0 ID=cds-WP_075671605.1;Parent=gene-L2557_RS10070;Dbxref=GenBank:WP_075671605.1;Name=WP_075671605.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537702.1;locus_tag=L2557_RS10070;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_075671605.1;transl_table=11 NZ_JAIKUA010000144.1 RefSeq gene 2973 3779 . - . ID=gene-L2557_RS10075;Name=nagB;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=L2557_RS10075 NZ_JAIKUA010000144.1 Protein Homology CDS 2973 3779 . - 0 ID=cds-WP_235410019.1;Parent=gene-L2557_RS10075;Dbxref=GenBank:WP_235410019.1;Name=WP_235410019.1;Ontology_term=GO:0006044,GO:0004342;gbkey=CDS;gene=nagB;go_function=glucosamine-6-phosphate deaminase activity|0004342||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246018.1;locus_tag=L2557_RS10075;product=glucosamine-6-phosphate deaminase;protein_id=WP_235410019.1;transl_table=11 NZ_JAIKUA010000144.1 RefSeq gene 4134 6176 . + . ID=gene-L2557_RS10080;Name=nagE;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=L2557_RS10080 NZ_JAIKUA010000144.1 Protein Homology CDS 4134 6176 . + 0 ID=cds-WP_099660178.1;Parent=gene-L2557_RS10080;Dbxref=GenBank:WP_099660178.1;Name=WP_099660178.1;Ontology_term=GO:0009401,GO:0008982,GO:0015572,GO:0016020;gbkey=CDS;gene=nagE;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,N-acetylglucosamine transmembrane transporter activity|0015572||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246016.1;locus_tag=L2557_RS10080;product=N-acetylglucosamine-specific PTS transporter subunit IIBC;protein_id=WP_099660178.1;transl_table=11 NZ_JAIKUA010000144.1 RefSeq gene 6374 8041 . + . ID=gene-L2557_RS10085;Name=glnS;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=L2557_RS10085 NZ_JAIKUA010000144.1 Protein Homology CDS 6374 8041 . + 0 ID=cds-WP_099659827.1;Parent=gene-L2557_RS10085;Dbxref=GenBank:WP_099659827.1;Name=WP_099659827.1;Ontology_term=GO:0006425,GO:0000166,GO:0004819,GO:0005524,GO:0005737;gbkey=CDS;gene=glnS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glutamine-tRNA ligase activity|0004819||IEA,ATP binding|0005524||IEA;go_process=glutaminyl-tRNA aminoacylation|0006425||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367653.1;locus_tag=L2557_RS10085;product=glutamine--tRNA ligase;protein_id=WP_099659827.1;transl_table=11 ##sequence-region NZ_JAIKUA010000145.1 1 16933 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000145.1 RefSeq region 1 16933 . + . ID=NZ_JAIKUA010000145.1:1..16933;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000145.1 RefSeq gene 194 601 . + . ID=gene-L2557_RS10090;Name=L2557_RS10090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10090 NZ_JAIKUA010000145.1 Protein Homology CDS 194 601 . + 0 ID=cds-WP_099660547.1;Parent=gene-L2557_RS10090;Dbxref=GenBank:WP_099660547.1;Name=WP_099660547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243305.1;locus_tag=L2557_RS10090;product=DUF4878 domain-containing protein;protein_id=WP_099660547.1;transl_table=11 NZ_JAIKUA010000145.1 RefSeq gene 598 1155 . + . ID=gene-L2557_RS10095;Name=L2557_RS10095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10095 NZ_JAIKUA010000145.1 Protein Homology CDS 598 1155 . + 0 ID=cds-WP_099660546.1;Parent=gene-L2557_RS10095;Dbxref=GenBank:WP_099660546.1;Name=WP_099660546.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243303.1;locus_tag=L2557_RS10095;product=YiiX/YebB-like N1pC/P60 family cysteine hydrolase;protein_id=WP_099660546.1;transl_table=11 NZ_JAIKUA010000145.1 RefSeq gene 1405 2109 . + . ID=gene-L2557_RS10100;Name=L2557_RS10100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10100 NZ_JAIKUA010000145.1 Protein Homology CDS 1405 2109 . + 0 ID=cds-WP_099660545.1;Parent=gene-L2557_RS10100;Dbxref=GenBank:WP_099660545.1;Name=WP_099660545.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255478.1;locus_tag=L2557_RS10100;product=RNA ligase family protein;protein_id=WP_099660545.1;transl_table=11 NZ_JAIKUA010000145.1 RefSeq gene 2106 3242 . + . ID=gene-L2557_RS10105;Name=L2557_RS10105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10105 NZ_JAIKUA010000145.1 Protein Homology CDS 2106 3242 . + 0 ID=cds-WP_075674015.1;Parent=gene-L2557_RS10105;Dbxref=GenBank:WP_075674015.1;Name=WP_075674015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827563.1;locus_tag=L2557_RS10105;product=AAA family ATPase;protein_id=WP_075674015.1;transl_table=11 NZ_JAIKUA010000145.1 RefSeq gene 3385 3876 . - . ID=gene-L2557_RS10110;Name=L2557_RS10110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10110 NZ_JAIKUA010000145.1 Protein Homology CDS 3385 3876 . - 0 ID=cds-WP_099660544.1;Parent=gene-L2557_RS10110;Dbxref=GenBank:WP_099660544.1;Name=WP_099660544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243298.1;locus_tag=L2557_RS10110;product=DUF4822 domain-containing protein;protein_id=WP_099660544.1;transl_table=11 NZ_JAIKUA010000145.1 RefSeq gene 4834 6054 . + . ID=gene-L2557_RS10115;Name=L2557_RS10115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10115 NZ_JAIKUA010000145.1 Protein Homology CDS 4834 6054 . + 0 ID=cds-WP_023581937.1;Parent=gene-L2557_RS10115;Dbxref=GenBank:WP_023581937.1;Name=WP_023581937.1;Ontology_term=GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243297.1;locus_tag=L2557_RS10115;product=PfkB family carbohydrate kinase;protein_id=WP_023581937.1;transl_table=11 NZ_JAIKUA010000145.1 RefSeq gene 6082 6819 . + . ID=gene-L2557_RS10120;Name=L2557_RS10120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10120 NZ_JAIKUA010000145.1 Protein Homology CDS 6082 6819 . + 0 ID=cds-WP_075674017.1;Parent=gene-L2557_RS10120;Dbxref=GenBank:WP_075674017.1;Name=WP_075674017.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004922167.1;locus_tag=L2557_RS10120;product=glutamine amidotransferase;protein_id=WP_075674017.1;transl_table=11 NZ_JAIKUA010000145.1 RefSeq gene 6950 7906 . + . ID=gene-L2557_RS10125;Name=L2557_RS10125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10125 NZ_JAIKUA010000145.1 Protein Homology CDS 6950 7906 . + 0 ID=cds-WP_075674018.1;Parent=gene-L2557_RS10125;Dbxref=GenBank:WP_075674018.1;Name=WP_075674018.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262178.1;locus_tag=L2557_RS10125;product=DMT family transporter;protein_id=WP_075674018.1;transl_table=11 NZ_JAIKUA010000145.1 RefSeq gene 7917 8948 . + . ID=gene-L2557_RS10130;Name=L2557_RS10130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10130 NZ_JAIKUA010000145.1 Protein Homology CDS 7917 8948 . + 0 ID=cds-WP_075674019.1;Parent=gene-L2557_RS10130;Dbxref=GenBank:WP_075674019.1;Name=WP_075674019.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243291.1;locus_tag=L2557_RS10130;product=methylphosphonate esterase;protein_id=WP_075674019.1;transl_table=11 NZ_JAIKUA010000145.1 RefSeq gene 9058 10038 . - . ID=gene-L2557_RS10135;Name=glpX;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=L2557_RS10135 NZ_JAIKUA010000145.1 Protein Homology CDS 9058 10038 . - 0 ID=cds-WP_075674020.1;Parent=gene-L2557_RS10135;Dbxref=GenBank:WP_075674020.1;Name=WP_075674020.1;Ontology_term=GO:0006071,GO:0006094,GO:0042132;gbkey=CDS;gene=glpX;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=glycerol metabolic process|0006071||IEA,gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248255.1;locus_tag=L2557_RS10135;product=class II fructose-bisphosphatase;protein_id=WP_075674020.1;transl_table=11 NZ_JAIKUA010000145.1 RefSeq gene 10245 13319 . + . ID=gene-L2557_RS10140;Name=L2557_RS10140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10140 NZ_JAIKUA010000145.1 Protein Homology CDS 10245 13319 . + 0 ID=cds-WP_099660543.1;Parent=gene-L2557_RS10140;Dbxref=GenBank:WP_099660543.1;Name=WP_099660543.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF021606.6;locus_tag=L2557_RS10140;product=DUF2339 domain-containing protein;protein_id=WP_099660543.1;transl_table=11 NZ_JAIKUA010000145.1 RefSeq gene 13683 14342 . + . ID=gene-L2557_RS10145;Name=L2557_RS10145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10145 NZ_JAIKUA010000145.1 Protein Homology CDS 13683 14342 . + 0 ID=cds-WP_075674023.1;Parent=gene-L2557_RS10145;Dbxref=GenBank:WP_075674023.1;Name=WP_075674023.1;Ontology_term=GO:0006355;gbkey=CDS;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243287.1;locus_tag=L2557_RS10145;product=LuxR C-terminal-related transcriptional regulator;protein_id=WP_075674023.1;transl_table=11 NZ_JAIKUA010000145.1 RefSeq gene 14326 16158 . + . ID=gene-L2557_RS10150;Name=uvrC;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=L2557_RS10150 NZ_JAIKUA010000145.1 Protein Homology CDS 14326 16158 . + 0 ID=cds-WP_099660542.1;Parent=gene-L2557_RS10150;Dbxref=GenBank:WP_099660542.1;Name=WP_099660542.1;Ontology_term=GO:0006289,GO:0009381,GO:0009380;gbkey=CDS;gene=uvrC;go_component=excinuclease repair complex|0009380||IEA;go_function=excinuclease ABC activity|0009381||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_310678.2;locus_tag=L2557_RS10150;product=excinuclease ABC subunit UvrC;protein_id=WP_099660542.1;transl_table=11 NZ_JAIKUA010000145.1 RefSeq gene 16214 16762 . + . ID=gene-L2557_RS10155;Name=pgsA;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=L2557_RS10155 NZ_JAIKUA010000145.1 Protein Homology CDS 16214 16762 . + 0 ID=cds-WP_075674025.1;Parent=gene-L2557_RS10155;Dbxref=GenBank:WP_075674025.1;Name=WP_075674025.1;gbkey=CDS;gene=pgsA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012989089.1;locus_tag=L2557_RS10155;product=CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase;protein_id=WP_075674025.1;transl_table=11 ##sequence-region NZ_JAIKUA010000146.1 1 13253 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000146.1 RefSeq region 1 13253 . + . ID=NZ_JAIKUA010000146.1:1..13253;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000146.1 RefSeq gene 173 1495 . - . ID=gene-L2557_RS10160;Name=L2557_RS10160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10160 NZ_JAIKUA010000146.1 Protein Homology CDS 173 1495 . - 0 ID=cds-WP_075673863.1;Parent=gene-L2557_RS10160;Dbxref=GenBank:WP_075673863.1;Name=WP_075673863.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245787.1;locus_tag=L2557_RS10160;product=MFS transporter;protein_id=WP_075673863.1;transl_table=11 NZ_JAIKUA010000146.1 RefSeq gene 1581 1868 . - . ID=gene-L2557_RS10165;Name=fixX;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=L2557_RS10165 NZ_JAIKUA010000146.1 Protein Homology CDS 1581 1868 . - 0 ID=cds-WP_075673862.1;Parent=gene-L2557_RS10165;Dbxref=GenBank:WP_075673862.1;Name=WP_075673862.1;gbkey=CDS;gene=fixX;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706000.1;locus_tag=L2557_RS10165;product=ferredoxin-like protein FixX;protein_id=WP_075673862.1;transl_table=11 NZ_JAIKUA010000146.1 RefSeq gene 1865 3157 . - . ID=gene-L2557_RS10170;Name=fixC;gbkey=Gene;gene=fixC;gene_biotype=protein_coding;locus_tag=L2557_RS10170 NZ_JAIKUA010000146.1 Protein Homology CDS 1865 3157 . - 0 ID=cds-WP_075673861.1;Parent=gene-L2557_RS10170;Dbxref=GenBank:WP_075673861.1;Name=WP_075673861.1;gbkey=CDS;gene=fixC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245789.1;locus_tag=L2557_RS10170;product=FAD-dependent oxidoreductase FixC;protein_id=WP_075673861.1;transl_table=11 NZ_JAIKUA010000146.1 RefSeq gene 3215 4153 . - . ID=gene-L2557_RS10175;Name=L2557_RS10175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10175 NZ_JAIKUA010000146.1 Protein Homology CDS 3215 4153 . - 0 ID=cds-WP_223674052.1;Parent=gene-L2557_RS10175;Dbxref=GenBank:WP_223674052.1;Name=WP_223674052.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245790.1;locus_tag=L2557_RS10175;product=FAD-binding protein;protein_id=WP_223674052.1;transl_table=11 NZ_JAIKUA010000146.1 RefSeq gene 4165 4938 . - . ID=gene-L2557_RS10180;Name=L2557_RS10180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10180 NZ_JAIKUA010000146.1 Protein Homology CDS 4165 4938 . - 0 ID=cds-WP_075673859.1;Parent=gene-L2557_RS10180;Dbxref=GenBank:WP_075673859.1;Name=WP_075673859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249233.1;locus_tag=L2557_RS10180;product=electron transfer flavoprotein FixA;protein_id=WP_075673859.1;transl_table=11 NZ_JAIKUA010000146.1 RefSeq gene 5539 7053 . + . ID=gene-L2557_RS10185;Name=caiT;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=L2557_RS10185 NZ_JAIKUA010000146.1 Protein Homology CDS 5539 7053 . + 0 ID=cds-WP_075673858.1;Parent=gene-L2557_RS10185;Dbxref=GenBank:WP_075673858.1;Name=WP_075673858.1;gbkey=CDS;gene=caiT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245792.1;locus_tag=L2557_RS10185;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=WP_075673858.1;transl_table=11 NZ_JAIKUA010000146.1 RefSeq gene 7095 8237 . + . ID=gene-L2557_RS10190;Name=caiA;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=L2557_RS10190 NZ_JAIKUA010000146.1 Protein Homology CDS 7095 8237 . + 0 ID=cds-WP_023582983.1;Parent=gene-L2557_RS10190;Dbxref=GenBank:WP_023582983.1;Name=WP_023582983.1;Ontology_term=GO:0009437,GO:0003995,GO:0016627;gbkey=CDS;gene=caiA;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124373.1;locus_tag=L2557_RS10190;product=crotonobetainyl-CoA dehydrogenase;protein_id=WP_023582983.1;transl_table=11 NZ_JAIKUA010000146.1 RefSeq gene 8307 9527 . + . ID=gene-L2557_RS10195;Name=caiB;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=L2557_RS10195 NZ_JAIKUA010000146.1 Protein Homology CDS 8307 9527 . + 0 ID=cds-WP_075673857.1;Parent=gene-L2557_RS10195;Dbxref=GenBank:WP_075673857.1;Name=WP_075673857.1;Ontology_term=GO:0009437,GO:0016782;gbkey=CDS;gene=caiB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245794.1;locus_tag=L2557_RS10195;product=L-carnitine CoA-transferase;protein_id=WP_075673857.1;transl_table=11 NZ_JAIKUA010000146.1 RefSeq gene 9600 11156 . + . ID=gene-L2557_RS10200;Name=caiC;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=L2557_RS10200 NZ_JAIKUA010000146.1 Protein Homology CDS 9600 11156 . + 0 ID=cds-WP_159363586.1;Parent=gene-L2557_RS10200;Dbxref=GenBank:WP_159363586.1;Name=WP_159363586.1;Ontology_term=GO:0009437,GO:0016405;gbkey=CDS;gene=caiC;go_function=CoA-ligase activity|0016405||IEA;go_process=carnitine metabolic process|0009437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010345447.1;locus_tag=L2557_RS10200;product=crotonobetaine/carnitine-CoA ligase;protein_id=WP_159363586.1;transl_table=11 NZ_JAIKUA010000146.1 RefSeq gene 11233 12018 . + . ID=gene-L2557_RS10205;Name=caiD;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=L2557_RS10205 NZ_JAIKUA010000146.1 Protein Homology CDS 11233 12018 . + 0 ID=cds-WP_099659737.1;Parent=gene-L2557_RS10205;Dbxref=GenBank:WP_099659737.1;Name=WP_099659737.1;Ontology_term=GO:0016836;gbkey=CDS;gene=caiD;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_414578.2;locus_tag=L2557_RS10205;product=crotonobetainyl-CoA hydratase;protein_id=WP_099659737.1;transl_table=11 NZ_JAIKUA010000146.1 RefSeq gene 12058 12651 . + . ID=gene-L2557_RS10210;Name=caiE;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=L2557_RS10210 NZ_JAIKUA010000146.1 Protein Homology CDS 12058 12651 . + 0 ID=cds-WP_075674369.1;Parent=gene-L2557_RS10210;Dbxref=GenBank:WP_075674369.1;Name=WP_075674369.1;gbkey=CDS;gene=caiE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250152.1;locus_tag=L2557_RS10210;product=carnitine operon protein CaiE;protein_id=WP_075674369.1;transl_table=11 NZ_JAIKUA010000146.1 RefSeq gene 12724 13116 . - . ID=gene-L2557_RS10215;Name=caiF;gbkey=Gene;gene=caiF;gene_biotype=protein_coding;locus_tag=L2557_RS10215 NZ_JAIKUA010000146.1 Protein Homology CDS 12724 13116 . - 0 ID=cds-WP_075674368.1;Parent=gene-L2557_RS10215;Dbxref=GenBank:WP_075674368.1;Name=WP_075674368.1;gbkey=CDS;gene=caiF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250151.1;locus_tag=L2557_RS10215;product=carnitine metabolism transcriptional regulator CaiF;protein_id=WP_075674368.1;transl_table=11 ##sequence-region NZ_JAIKUA010000147.1 1 14693 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000147.1 RefSeq region 1 14693 . + . ID=NZ_JAIKUA010000147.1:1..14693;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000147.1 RefSeq gene 6 1658 . - . ID=gene-L2557_RS10220;Name=L2557_RS10220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10220 NZ_JAIKUA010000147.1 Protein Homology CDS 6 1658 . - 0 ID=cds-WP_235410020.1;Parent=gene-L2557_RS10220;Dbxref=GenBank:WP_235410020.1;Name=WP_235410020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661714.1;locus_tag=L2557_RS10220;product=DUF4139 domain-containing protein;protein_id=WP_235410020.1;transl_table=11 NZ_JAIKUA010000147.1 RefSeq gene 2020 3420 . - . ID=gene-L2557_RS10225;Name=L2557_RS10225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10225 NZ_JAIKUA010000147.1 Protein Homology CDS 2020 3420 . - 0 ID=cds-WP_235410021.1;Parent=gene-L2557_RS10225;Dbxref=GenBank:WP_235410021.1;Name=WP_235410021.1;Ontology_term=GO:0019239;gbkey=CDS;go_function=deaminase activity|0019239||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911176.1;locus_tag=L2557_RS10225;product=amidohydrolase;protein_id=WP_235410021.1;transl_table=11 NZ_JAIKUA010000147.1 RefSeq gene 3594 4832 . + . ID=gene-L2557_RS10230;Name=L2557_RS10230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10230 NZ_JAIKUA010000147.1 Protein Homology CDS 3594 4832 . + 0 ID=cds-WP_235410022.1;Parent=gene-L2557_RS10230;Dbxref=GenBank:WP_235410022.1;Name=WP_235410022.1;Ontology_term=GO:0050896;gbkey=CDS;go_process=response to stimulus|0050896||IEA;inference=COORDINATES: protein motif:HMM:NF014404.6;locus_tag=L2557_RS10230;product=TerD family protein;protein_id=WP_235410022.1;transl_table=11 NZ_JAIKUA010000147.1 RefSeq gene 4935 5390 . - . ID=gene-L2557_RS10235;Name=L2557_RS10235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10235 NZ_JAIKUA010000147.1 Protein Homology CDS 4935 5390 . - 0 ID=cds-WP_235410023.1;Parent=gene-L2557_RS10235;Dbxref=GenBank:WP_235410023.1;Name=WP_235410023.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004239320.1;locus_tag=L2557_RS10235;product=YaiI/YqxD family protein;protein_id=WP_235410023.1;transl_table=11 NZ_JAIKUA010000147.1 RefSeq gene 5460 6335 . - . ID=gene-L2557_RS10240;Name=L2557_RS10240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10240 NZ_JAIKUA010000147.1 Protein Homology CDS 5460 6335 . - 0 ID=cds-WP_075672842.1;Parent=gene-L2557_RS10240;Dbxref=GenBank:WP_075672842.1;Name=WP_075672842.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658375.1;locus_tag=L2557_RS10240;product=EamA family transporter;protein_id=WP_075672842.1;transl_table=11 NZ_JAIKUA010000147.1 RefSeq gene 6435 6917 . + . ID=gene-L2557_RS10245;Name=L2557_RS10245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10245 NZ_JAIKUA010000147.1 Protein Homology CDS 6435 6917 . + 0 ID=cds-WP_099660433.1;Parent=gene-L2557_RS10245;Dbxref=GenBank:WP_099660433.1;Name=WP_099660433.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659815.1;locus_tag=L2557_RS10245;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_099660433.1;transl_table=11 NZ_JAIKUA010000147.1 RefSeq gene 7202 9340 . + . ID=gene-L2557_RS10250;Name=L2557_RS10250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10250 NZ_JAIKUA010000147.1 Protein Homology CDS 7202 9340 . + 0 ID=cds-WP_235410024.1;Parent=gene-L2557_RS10250;Dbxref=GenBank:WP_235410024.1;Name=WP_235410024.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001416205.1;locus_tag=L2557_RS10250;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_235410024.1;transl_table=11 NZ_JAIKUA010000147.1 RefSeq gene 9343 10221 . + . ID=gene-L2557_RS10255;Name=L2557_RS10255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10255 NZ_JAIKUA010000147.1 Protein Homology CDS 9343 10221 . + 0 ID=cds-WP_223672422.1;Parent=gene-L2557_RS10255;Dbxref=GenBank:WP_223672422.1;Name=WP_223672422.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016155888.1;locus_tag=L2557_RS10255;product=heme/hemin ABC transporter substrate-binding protein;protein_id=WP_223672422.1;transl_table=11 NZ_JAIKUA010000147.1 RefSeq gene 10235 11581 . + . ID=gene-L2557_RS10260;Name=hutW;gbkey=Gene;gene=hutW;gene_biotype=protein_coding;locus_tag=L2557_RS10260 NZ_JAIKUA010000147.1 Protein Homology CDS 10235 11581 . + 0 ID=cds-WP_373274655.1;Parent=gene-L2557_RS10260;Dbxref=GenBank:WP_373274655.1;Name=WP_373274655.1;Ontology_term=GO:0003824,GO:0051536;gbkey=CDS;gene=hutW;go_function=catalytic activity|0003824||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913689.1;locus_tag=L2557_RS10260;product=heme anaerobic degradation radical SAM methyltransferase ChuW/HutW;protein_id=WP_373274655.1;transl_table=11 NZ_JAIKUA010000147.1 RefSeq gene 11624 12112 . + . ID=gene-L2557_RS10265;Name=hutX;gbkey=Gene;gene=hutX;gene_biotype=protein_coding;locus_tag=L2557_RS10265 NZ_JAIKUA010000147.1 Protein Homology CDS 11624 12112 . + 0 ID=cds-WP_229578339.1;Parent=gene-L2557_RS10265;Dbxref=GenBank:WP_229578339.1;Name=WP_229578339.1;gbkey=CDS;gene=hutX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016517521.1;locus_tag=L2557_RS10265;product=heme utilization cystosolic carrier protein HutX;protein_id=WP_229578339.1;transl_table=11 NZ_JAIKUA010000147.1 RefSeq gene 12119 12745 . + . ID=gene-L2557_RS10270;Name=L2557_RS10270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10270 NZ_JAIKUA010000147.1 Protein Homology CDS 12119 12745 . + 0 ID=cds-WP_075672846.1;Parent=gene-L2557_RS10270;Dbxref=GenBank:WP_075672846.1;Name=WP_075672846.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000189338.1;locus_tag=L2557_RS10270;product=NAD(P)H-binding protein;protein_id=WP_075672846.1;transl_table=11 NZ_JAIKUA010000147.1 RefSeq gene 13006 14601 . + . ID=gene-L2557_RS10275;Name=L2557_RS10275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10275 NZ_JAIKUA010000147.1 Protein Homology CDS 13006 14601 . + 0 ID=cds-WP_075672847.1;Parent=gene-L2557_RS10275;Dbxref=GenBank:WP_075672847.1;Name=WP_075672847.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308924.1;locus_tag=L2557_RS10275;product=ABC-F family ATPase;protein_id=WP_075672847.1;transl_table=11 ##sequence-region NZ_JAIKUA010000148.1 1 7867 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000148.1 RefSeq region 1 7867 . + . ID=NZ_JAIKUA010000148.1:1..7867;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000148.1 RefSeq gene 374 1909 . - . ID=gene-L2557_RS10280;Name=murJ;gbkey=Gene;gene=murJ;gene_biotype=protein_coding;locus_tag=L2557_RS10280 NZ_JAIKUA010000148.1 Protein Homology CDS 374 1909 . - 0 ID=cds-WP_223673609.1;Parent=gene-L2557_RS10280;Dbxref=GenBank:WP_223673609.1;Name=WP_223673609.1;Ontology_term=GO:0009252,GO:0034204;gbkey=CDS;gene=murJ;go_process=peptidoglycan biosynthetic process|0009252||IEA,lipid translocation|0034204||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005967724.1;locus_tag=L2557_RS10280;product=murein biosynthesis integral membrane protein MurJ;protein_id=WP_223673609.1;transl_table=11 NZ_JAIKUA010000148.1 RefSeq gene 2056 2652 . - . ID=gene-L2557_RS10285;Name=L2557_RS10285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10285 NZ_JAIKUA010000148.1 Protein Homology CDS 2056 2652 . - 0 ID=cds-WP_075671039.1;Parent=gene-L2557_RS10285;Dbxref=GenBank:WP_075671039.1;Name=WP_075671039.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012987656.1;locus_tag=L2557_RS10285;product=TetR/AcrR family transcriptional regulator;protein_id=WP_075671039.1;transl_table=11 NZ_JAIKUA010000148.1 RefSeq gene 2757 3392 . + . ID=gene-L2557_RS10290;Name=L2557_RS10290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10290 NZ_JAIKUA010000148.1 Protein Homology CDS 2757 3392 . + 0 ID=cds-WP_099660347.1;Parent=gene-L2557_RS10290;Dbxref=GenBank:WP_099660347.1;Name=WP_099660347.1;Ontology_term=GO:0008080;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: protein motif:HMM:NF012792.6;locus_tag=L2557_RS10290;product=GNAT family N-acetyltransferase;protein_id=WP_099660347.1;transl_table=11 NZ_JAIKUA010000148.1 RefSeq gene 3500 4081 . - . ID=gene-L2557_RS10295;Name=rimJ;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=L2557_RS10295 NZ_JAIKUA010000148.1 Protein Homology CDS 3500 4081 . - 0 ID=cds-WP_075671035.1;Parent=gene-L2557_RS10295;Dbxref=GenBank:WP_075671035.1;Name=WP_075671035.1;Ontology_term=GO:0008080;gbkey=CDS;gene=rimJ;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536580.1;locus_tag=L2557_RS10295;product=ribosomal protein S5-alanine N-acetyltransferase;protein_id=WP_075671035.1;transl_table=11 NZ_JAIKUA010000148.1 RefSeq gene 4278 5480 . + . ID=gene-L2557_RS10300;Name=mdtH;gbkey=Gene;gene=mdtH;gene_biotype=protein_coding;locus_tag=L2557_RS10300 NZ_JAIKUA010000148.1 Protein Homology CDS 4278 5480 . + 0 ID=cds-WP_156733479.1;Parent=gene-L2557_RS10300;Dbxref=GenBank:WP_156733479.1;Name=WP_156733479.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtH;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247974.1;locus_tag=L2557_RS10300;product=multidrug efflux MFS transporter MdtH;protein_id=WP_156733479.1;transl_table=11 NZ_JAIKUA010000148.1 RefSeq gene 5523 6077 . + . ID=gene-L2557_RS10305;Name=L2557_RS10305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10305 NZ_JAIKUA010000148.1 Protein Homology CDS 5523 6077 . + 0 ID=cds-WP_075671031.1;Parent=gene-L2557_RS10305;Dbxref=GenBank:WP_075671031.1;Name=WP_075671031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247972.1;locus_tag=L2557_RS10305;product=lipoprotein;protein_id=WP_075671031.1;transl_table=11 NZ_JAIKUA010000148.1 RefSeq gene 6187 6768 . - . ID=gene-L2557_RS10310;Name=L2557_RS10310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10310 NZ_JAIKUA010000148.1 Protein Homology CDS 6187 6768 . - 0 ID=cds-WP_075671029.1;Parent=gene-L2557_RS10310;Dbxref=GenBank:WP_075671029.1;Name=WP_075671029.1;Ontology_term=GO:0006457;gbkey=CDS;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008813282.1;locus_tag=L2557_RS10310;product=TorD/DmsD family molecular chaperone;protein_id=WP_075671029.1;transl_table=11 NZ_JAIKUA010000148.1 RefSeq gene 7020 7628 . - . ID=gene-L2557_RS10315;Name=L2557_RS10315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10315 NZ_JAIKUA010000148.1 Protein Homology CDS 7020 7628 . - 0 ID=cds-WP_075671027.1;Parent=gene-L2557_RS10315;Dbxref=GenBank:WP_075671027.1;Name=WP_075671027.1;Ontology_term=GO:0008198,GO:0016705;gbkey=CDS;go_function=ferrous iron binding|0008198||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen|0016705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242697.1;locus_tag=L2557_RS10315;product=2OG-Fe(II) oxygenase;protein_id=WP_075671027.1;transl_table=11 ##sequence-region NZ_JAIKUA010000149.1 1 5212 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000149.1 RefSeq region 1 5212 . + . ID=NZ_JAIKUA010000149.1:1..5212;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000149.1 RefSeq gene 1 5212 . + . ID=gene-L2557_RS10320;Name=L2557_RS10320;end_range=5212,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10320;partial=true;start_range=.,1 NZ_JAIKUA010000149.1 Protein Homology CDS 1 5212 . + 1 ID=cds-WP_235410025.1;Parent=gene-L2557_RS10320;Dbxref=GenBank:WP_235410025.1;Name=WP_235410025.1;end_range=5212,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024728.6;locus_tag=L2557_RS10320;partial=true;product=hemagglutinin repeat-containing protein;protein_id=WP_235410025.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000015.1 1 61999 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000015.1 RefSeq region 1 61999 . + . ID=NZ_JAIKUA010000015.1:1..61999;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000015.1 RefSeq gene 32 379 . - . ID=gene-L2557_RS01355;Name=L2557_RS01355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01355 NZ_JAIKUA010000015.1 Protein Homology CDS 32 379 . - 0 ID=cds-WP_075671516.1;Parent=gene-L2557_RS01355;Dbxref=GenBank:WP_075671516.1;Name=WP_075671516.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917571.1;locus_tag=L2557_RS01355;product=YfiM family lipoprotein;protein_id=WP_075671516.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 520 1878 . - . ID=gene-L2557_RS01360;Name=pssA;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=L2557_RS01360 NZ_JAIKUA010000015.1 Protein Homology CDS 520 1878 . - 0 ID=cds-WP_075671518.1;Parent=gene-L2557_RS01360;Dbxref=GenBank:WP_075671518.1;Name=WP_075671518.1;Ontology_term=GO:0032049,GO:0008444;gbkey=CDS;gene=pssA;go_function=CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity|0008444||IEA;go_process=cardiolipin biosynthetic process|0032049||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246096.1;locus_tag=L2557_RS01360;product=CDP-diacylglycerol--serine O-phosphatidyltransferase;protein_id=WP_075671518.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 2057 4726 . - . ID=gene-L2557_RS01365;Name=L2557_RS01365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01365 NZ_JAIKUA010000015.1 Protein Homology CDS 2057 4726 . - 0 ID=cds-WP_075671520.1;Parent=gene-L2557_RS01365;Dbxref=GenBank:WP_075671520.1;Name=WP_075671520.1;Ontology_term=GO:0046356,GO:0003985,GO:0005524,GO:0008080,GO:0043758;gbkey=CDS;go_function=acetyl-CoA C-acetyltransferase activity|0003985||IEA,ATP binding|0005524||IEA,N-acetyltransferase activity|0008080||IEA,acetate-CoA ligase (ADP-forming) activity|0043758||IEA;go_process=acetyl-CoA catabolic process|0046356||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537776.1;locus_tag=L2557_RS01365;product=bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase;protein_id=WP_075671520.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 4755 5456 . - . ID=gene-L2557_RS01370;Name=L2557_RS01370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01370 NZ_JAIKUA010000015.1 Protein Homology CDS 4755 5456 . - 0 ID=cds-WP_075671522.1;Parent=gene-L2557_RS01370;Dbxref=GenBank:WP_075671522.1;Name=WP_075671522.1;Ontology_term=GO:0006400,GO:0016432;gbkey=CDS;go_function=tRNA-uridine aminocarboxypropyltransferase activity|0016432||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247414.1;locus_tag=L2557_RS01370;product=tRNA-uridine aminocarboxypropyltransferase;protein_id=WP_075671522.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 5688 6803 . + . ID=gene-L2557_RS01375;Name=L2557_RS01375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01375 NZ_JAIKUA010000015.1 Protein Homology CDS 5688 6803 . + 0 ID=cds-WP_075671524.1;Parent=gene-L2557_RS01375;Dbxref=GenBank:WP_075671524.1;Name=WP_075671524.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252256.1;locus_tag=L2557_RS01375;product=tRNA/rRNA methyltransferase;protein_id=WP_075671524.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 6896 8413 . - . ID=gene-L2557_RS01380;Name=emrB;gbkey=Gene;gene=emrB;gene_biotype=protein_coding;locus_tag=L2557_RS01380 NZ_JAIKUA010000015.1 Protein Homology CDS 6896 8413 . - 0 ID=cds-WP_075671526.1;Parent=gene-L2557_RS01380;Dbxref=GenBank:WP_075671526.1;Name=WP_075671526.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=emrB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247419.1;locus_tag=L2557_RS01380;product=multidrug efflux MFS transporter permease subunit EmrB;protein_id=WP_075671526.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 8429 9607 . - . ID=gene-L2557_RS01385;Name=emrA;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=L2557_RS01385 NZ_JAIKUA010000015.1 Protein Homology CDS 8429 9607 . - 0 ID=cds-WP_099660160.1;Parent=gene-L2557_RS01385;Dbxref=GenBank:WP_099660160.1;Name=WP_099660160.1;gbkey=CDS;gene=emrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004235565.1;locus_tag=L2557_RS01385;product=multidrug efflux MFS transporter periplasmic adaptor subunit EmrA;protein_id=WP_099660160.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 9800 10327 . - . ID=gene-L2557_RS01390;Name=mprA;gbkey=Gene;gene=mprA;gene_biotype=protein_coding;locus_tag=L2557_RS01390 NZ_JAIKUA010000015.1 Protein Homology CDS 9800 10327 . - 0 ID=cds-WP_075671530.1;Parent=gene-L2557_RS01390;Dbxref=GenBank:WP_075671530.1;Name=WP_075671530.1;gbkey=CDS;gene=mprA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246081.1;locus_tag=L2557_RS01390;product=transcriptional repressor MprA;protein_id=WP_075671530.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 10820 12028 . - . ID=gene-L2557_RS01395;Name=L2557_RS01395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01395 NZ_JAIKUA010000015.1 Protein Homology CDS 10820 12028 . - 0 ID=cds-WP_075671651.1;Parent=gene-L2557_RS01395;Dbxref=GenBank:WP_075671651.1;Name=WP_075671651.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246079.1;locus_tag=L2557_RS01395;product=MFS transporter;protein_id=WP_075671651.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 12195 12602 . - . ID=gene-L2557_RS01400;Name=L2557_RS01400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01400 NZ_JAIKUA010000015.1 GeneMarkS-2+ CDS 12195 12602 . - 0 ID=cds-WP_099660161.1;Parent=gene-L2557_RS01400;Dbxref=GenBank:WP_099660161.1;Name=WP_099660161.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS01400;product=hypothetical protein;protein_id=WP_099660161.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 12613 13944 . - . ID=gene-L2557_RS01405;Name=L2557_RS01405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01405 NZ_JAIKUA010000015.1 Protein Homology CDS 12613 13944 . - 0 ID=cds-WP_109420347.1;Parent=gene-L2557_RS01405;Dbxref=GenBank:WP_109420347.1;Name=WP_109420347.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255123.1;locus_tag=L2557_RS01405;product=phosphatase PAP2/dual specificity phosphatase family protein;protein_id=WP_109420347.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 14049 15818 . - . ID=gene-L2557_RS01410;Name=L2557_RS01410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01410 NZ_JAIKUA010000015.1 Protein Homology CDS 14049 15818 . - 0 ID=cds-WP_156733091.1;Parent=gene-L2557_RS01410;Dbxref=GenBank:WP_156733091.1;Name=WP_156733091.1;Ontology_term=GO:0008168,GO:0016787,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,hydrolase activity|0016787||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661857.1;locus_tag=L2557_RS01410;product=bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase;protein_id=WP_156733091.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 15815 16450 . - . ID=gene-L2557_RS01415;Name=L2557_RS01415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01415 NZ_JAIKUA010000015.1 Protein Homology CDS 15815 16450 . - 0 ID=cds-WP_075671538.1;Parent=gene-L2557_RS01415;Dbxref=GenBank:WP_075671538.1;Name=WP_075671538.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004919403.1;locus_tag=L2557_RS01415;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_075671538.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 17000 19333 . + . ID=gene-L2557_RS01420;Name=L2557_RS01420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01420 NZ_JAIKUA010000015.1 Protein Homology CDS 17000 19333 . + 0 ID=cds-WP_223673720.1;Parent=gene-L2557_RS01420;Dbxref=GenBank:WP_223673720.1;Name=WP_223673720.1;Ontology_term=GO:0055085,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913491.1;locus_tag=L2557_RS01420;product=TonB-dependent hemoglobin/transferrin/lactoferrin family receptor;protein_id=WP_223673720.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 19417 19767 . - . ID=gene-L2557_RS01425;Name=L2557_RS01425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01425 NZ_JAIKUA010000015.1 Protein Homology CDS 19417 19767 . - 0 ID=cds-WP_075671540.1;Parent=gene-L2557_RS01425;Dbxref=GenBank:WP_075671540.1;Name=WP_075671540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537757.1;locus_tag=L2557_RS01425;product=ribonuclease G;protein_id=WP_075671540.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 20053 21048 . - . ID=gene-L2557_RS01430;Name=proX;gbkey=Gene;gene=proX;gene_biotype=protein_coding;locus_tag=L2557_RS01430 NZ_JAIKUA010000015.1 Protein Homology CDS 20053 21048 . - 0 ID=cds-WP_075671542.1;Parent=gene-L2557_RS01430;Dbxref=GenBank:WP_075671542.1;Name=WP_075671542.1;Ontology_term=GO:0055085,GO:0022857,GO:0043190;gbkey=CDS;gene=proX;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537756.1;locus_tag=L2557_RS01430;product=glycine betaine/L-proline ABC transporter substrate-binding protein ProX;protein_id=WP_075671542.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 21170 22369 . - . ID=gene-L2557_RS01435;Name=proW;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=L2557_RS01435 NZ_JAIKUA010000015.1 Protein Homology CDS 21170 22369 . - 0 ID=cds-WP_075671544.1;Parent=gene-L2557_RS01435;Dbxref=GenBank:WP_075671544.1;Name=WP_075671544.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=proW;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252252.1;locus_tag=L2557_RS01435;product=glycine betaine/L-proline ABC transporter permease ProW;protein_id=WP_075671544.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 22362 23561 . - . ID=gene-L2557_RS01440;Name=proV;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=L2557_RS01440 NZ_JAIKUA010000015.1 Protein Homology CDS 22362 23561 . - 0 ID=cds-WP_075671546.1;Parent=gene-L2557_RS01440;Dbxref=GenBank:WP_075671546.1;Name=WP_075671546.1;Ontology_term=GO:0031460,GO:0005524;gbkey=CDS;gene=proV;go_function=ATP binding|0005524||IEA;go_process=glycine betaine transport|0031460||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212210.1;locus_tag=L2557_RS01440;product=glycine betaine/L-proline ABC transporter ATP-binding protein ProV;protein_id=WP_075671546.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 24185 25153 . - . ID=gene-L2557_RS01445;Name=nrdF;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=L2557_RS01445 NZ_JAIKUA010000015.1 Protein Homology CDS 24185 25153 . - 0 ID=cds-WP_075671548.1;Parent=gene-L2557_RS01445;Dbxref=GenBank:WP_075671548.1;Name=WP_075671548.1;Ontology_term=GO:0009263,GO:0004748,GO:0005971;gbkey=CDS;gene=nrdF;go_component=ribonucleoside-diphosphate reductase complex|0005971||IEA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252250.1;locus_tag=L2557_RS01445;product=class 1b ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_075671548.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 25178 27304 . - . ID=gene-L2557_RS01450;Name=nrdE;gbkey=Gene;gene=nrdE;gene_biotype=protein_coding;locus_tag=L2557_RS01450 NZ_JAIKUA010000015.1 Protein Homology CDS 25178 27304 . - 0 ID=cds-WP_164530353.1;Parent=gene-L2557_RS01450;Dbxref=GenBank:WP_164530353.1;Name=WP_164530353.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdE;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247428.1;locus_tag=L2557_RS01450;product=class 1b ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_164530353.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 27310 27729 . - . ID=gene-L2557_RS01455;Name=nrdI;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=L2557_RS01455 NZ_JAIKUA010000015.1 Protein Homology CDS 27310 27729 . - 0 ID=cds-WP_075671552.1;Parent=gene-L2557_RS01455;Dbxref=GenBank:WP_075671552.1;Name=WP_075671552.1;Ontology_term=GO:0009263,GO:0036211,GO:0010181;gbkey=CDS;gene=nrdI;go_function=FMN binding|0010181||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA,protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537746.1;locus_tag=L2557_RS01455;product=class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI;protein_id=WP_075671552.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 27741 27965 . - . ID=gene-L2557_RS01460;Name=L2557_RS01460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01460 NZ_JAIKUA010000015.1 Protein Homology CDS 27741 27965 . - 0 ID=cds-WP_075671554.1;Parent=gene-L2557_RS01460;Dbxref=GenBank:WP_075671554.1;Name=WP_075671554.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537745.1;locus_tag=L2557_RS01460;product=glutaredoxin family protein;protein_id=WP_075671554.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 28249 28722 . + . ID=gene-L2557_RS01465;Name=L2557_RS01465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01465 NZ_JAIKUA010000015.1 Protein Homology CDS 28249 28722 . + 0 ID=cds-WP_075671556.1;Parent=gene-L2557_RS01465;Dbxref=GenBank:WP_075671556.1;Name=WP_075671556.1;Ontology_term=GO:0006281,GO:0032259,GO:0003677,GO:0003908,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,methylated-DNA-[protein]-cysteine S-methyltransferase activity|0003908||IEA,metal ion binding|0046872||IEA;go_process=DNA repair|0006281||IEA,methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246069.1;locus_tag=L2557_RS01465;product=methylated-DNA--[protein]-cysteine S-methyltransferase;protein_id=WP_075671556.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 28920 29129 . + . ID=gene-L2557_RS01470;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=L2557_RS01470 NZ_JAIKUA010000015.1 Protein Homology CDS 28920 29129 . + 0 ID=cds-WP_023581133.1;Parent=gene-L2557_RS01470;Dbxref=GenBank:WP_023581133.1;Name=WP_023581133.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225795.1;locus_tag=L2557_RS01470;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_023581133.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 29267 29641 . - . ID=gene-L2557_RS01475;Name=crcB;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=L2557_RS01475 NZ_JAIKUA010000015.1 Protein Homology CDS 29267 29641 . - 0 ID=cds-WP_023581134.1;Parent=gene-L2557_RS01475;Dbxref=GenBank:WP_023581134.1;Name=WP_023581134.1;Ontology_term=GO:0016020;gbkey=CDS;gene=crcB;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246058.1;locus_tag=L2557_RS01475;product=fluoride efflux transporter CrcB;protein_id=WP_023581134.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 29655 30620 . - . ID=gene-L2557_RS01480;Name=lipA;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=L2557_RS01480 NZ_JAIKUA010000015.1 Protein Homology CDS 29655 30620 . - 0 ID=cds-WP_075671558.1;Parent=gene-L2557_RS01480;Dbxref=GenBank:WP_075671558.1;Name=WP_075671558.1;Ontology_term=GO:0009107,GO:0016992,GO:0051539,GO:1904047;gbkey=CDS;gene=lipA;go_function=lipoate synthase activity|0016992||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=lipoate biosynthetic process|0009107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012904980.1;locus_tag=L2557_RS01480;product=lipoyl synthase;protein_id=WP_075671558.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 30722 31366 . - . ID=gene-L2557_RS01485;Name=lipB;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=L2557_RS01485 NZ_JAIKUA010000015.1 Protein Homology CDS 30722 31366 . - 0 ID=cds-WP_075671560.1;Parent=gene-L2557_RS01485;Dbxref=GenBank:WP_075671560.1;Name=WP_075671560.1;Ontology_term=GO:0009249,GO:0033819;gbkey=CDS;gene=lipB;go_function=lipoyl(octanoyl) transferase activity|0033819||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537741.1;locus_tag=L2557_RS01485;product=lipoyl(octanoyl) transferase LipB;protein_id=WP_075671560.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 31527 31790 . - . ID=gene-L2557_RS01490;Name=ybeD;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=L2557_RS01490 NZ_JAIKUA010000015.1 Protein Homology CDS 31527 31790 . - 0 ID=cds-WP_036912266.1;Parent=gene-L2557_RS01490;Dbxref=GenBank:WP_036912266.1;Name=WP_036912266.1;gbkey=CDS;gene=ybeD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308696.1;locus_tag=L2557_RS01490;product=DUF493 family protein YbeD;protein_id=WP_036912266.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 31991 33202 . - . ID=gene-L2557_RS01495;Name=dacA;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=L2557_RS01495 NZ_JAIKUA010000015.1 Protein Homology CDS 31991 33202 . - 0 ID=cds-WP_075671562.1;Parent=gene-L2557_RS01495;Dbxref=GenBank:WP_075671562.1;Name=WP_075671562.1;Ontology_term=GO:0006508,GO:0009002;gbkey=CDS;gene=dacA;go_function=serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246054.1;locus_tag=L2557_RS01495;product=D-alanyl-D-alanine carboxypeptidase DacA;protein_id=WP_075671562.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 33325 34314 . - . ID=gene-L2557_RS01500;Name=rlpA;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=L2557_RS01500 NZ_JAIKUA010000015.1 Protein Homology CDS 33325 34314 . - 0 ID=cds-WP_075671564.1;Parent=gene-L2557_RS01500;Dbxref=GenBank:WP_075671564.1;Name=WP_075671564.1;Ontology_term=GO:0042834;gbkey=CDS;gene=rlpA;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252243.1;locus_tag=L2557_RS01500;product=endolytic peptidoglycan transglycosylase RlpA;protein_id=WP_075671564.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 34325 35437 . - . ID=gene-L2557_RS01505;Name=mrdB;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;gene_synonym=rodA;locus_tag=L2557_RS01505 NZ_JAIKUA010000015.1 Protein Homology CDS 34325 35437 . - 0 ID=cds-WP_075671566.1;Parent=gene-L2557_RS01505;Dbxref=GenBank:WP_075671566.1;Name=WP_075671566.1;Note=rod shape-determining protein RodA;gbkey=CDS;gene=mrdB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716309.1;locus_tag=L2557_RS01505;product=peptidoglycan glycosyltransferase MrdB;protein_id=WP_075671566.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 35443 37338 . - . ID=gene-L2557_RS01510;Name=mrdA;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=L2557_RS01510 NZ_JAIKUA010000015.1 Protein Homology CDS 35443 37338 . - 0 ID=cds-WP_099660167.1;Parent=gene-L2557_RS01510;Dbxref=GenBank:WP_099660167.1;Name=WP_099660167.1;Ontology_term=GO:0009252,GO:0008658,GO:0009002,GO:0016020;gbkey=CDS;gene=mrdA;go_component=membrane|0016020||IEA;go_function=penicillin binding|0008658||IEA,serine-type D-Ala-D-Ala carboxypeptidase activity|0009002||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246051.1;locus_tag=L2557_RS01510;product=peptidoglycan DD-transpeptidase MrdA;protein_id=WP_099660167.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 37377 37847 . - . ID=gene-L2557_RS01515;Name=rlmH;gbkey=Gene;gene=rlmH;gene_biotype=protein_coding;locus_tag=L2557_RS01515 NZ_JAIKUA010000015.1 Protein Homology CDS 37377 37847 . - 0 ID=cds-WP_004246050.1;Parent=gene-L2557_RS01515;Dbxref=GenBank:WP_004246050.1;Name=WP_004246050.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rlmH;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016245807.1;locus_tag=L2557_RS01515;product=23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH;protein_id=WP_004246050.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 37850 38176 . - . ID=gene-L2557_RS01520;Name=rsfS;gbkey=Gene;gene=rsfS;gene_biotype=protein_coding;locus_tag=L2557_RS01520 NZ_JAIKUA010000015.1 Protein Homology CDS 37850 38176 . - 0 ID=cds-WP_006537732.1;Parent=gene-L2557_RS01520;Dbxref=GenBank:WP_006537732.1;Name=WP_006537732.1;Ontology_term=GO:0017148,GO:0043022;gbkey=CDS;gene=rsfS;go_function=ribosome binding|0043022||IEA;go_process=negative regulation of translation|0017148||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660943.1;locus_tag=L2557_RS01520;product=ribosome silencing factor;protein_id=WP_006537732.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 38568 39314 . + . ID=gene-L2557_RS01525;Name=L2557_RS01525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01525 NZ_JAIKUA010000015.1 Protein Homology CDS 38568 39314 . + 0 ID=cds-WP_223672881.1;Parent=gene-L2557_RS01525;Dbxref=GenBank:WP_223672881.1;Name=WP_223672881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247436.1;locus_tag=L2557_RS01525;product=YbgA family protein;protein_id=WP_223672881.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 39321 39992 . - . ID=gene-L2557_RS01530;Name=nadD;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=L2557_RS01530 NZ_JAIKUA010000015.1 Protein Homology CDS 39321 39992 . - 0 ID=cds-WP_109420311.1;Parent=gene-L2557_RS01530;Dbxref=GenBank:WP_109420311.1;Name=WP_109420311.1;Ontology_term=GO:0009435,GO:0016779;gbkey=CDS;gene=nadD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=NAD+ biosynthetic process|0009435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537730.1;locus_tag=L2557_RS01530;product=nicotinate-nucleotide adenylyltransferase;protein_id=WP_109420311.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 39985 41019 . - . ID=gene-L2557_RS01535;Name=holA;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=L2557_RS01535 NZ_JAIKUA010000015.1 Protein Homology CDS 39985 41019 . - 0 ID=cds-WP_099660170.1;Parent=gene-L2557_RS01535;Dbxref=GenBank:WP_099660170.1;Name=WP_099660170.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=holA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246046.1;locus_tag=L2557_RS01535;product=DNA polymerase III subunit delta;protein_id=WP_099660170.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 41016 41564 . - . ID=gene-L2557_RS01540;Name=lptE;gbkey=Gene;gene=lptE;gene_biotype=protein_coding;locus_tag=L2557_RS01540 NZ_JAIKUA010000015.1 Protein Homology CDS 41016 41564 . - 0 ID=cds-WP_075671576.1;Parent=gene-L2557_RS01540;Dbxref=GenBank:WP_075671576.1;Name=WP_075671576.1;Ontology_term=GO:0043165,GO:0019867;gbkey=CDS;gene=lptE;go_component=outer membrane|0019867||IEA;go_process=Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246045.1;locus_tag=L2557_RS01540;product=LPS assembly lipoprotein LptE;protein_id=WP_075671576.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 41577 44159 . - . ID=gene-L2557_RS01545;Name=leuS;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=L2557_RS01545 NZ_JAIKUA010000015.1 Protein Homology CDS 41577 44159 . - 0 ID=cds-WP_075671578.1;Parent=gene-L2557_RS01545;Dbxref=GenBank:WP_075671578.1;Name=WP_075671578.1;Ontology_term=GO:0006429,GO:0000166,GO:0004823,GO:0005524;gbkey=CDS;gene=leuS;go_function=nucleotide binding|0000166||IEA,leucine-tRNA ligase activity|0004823||IEA,ATP binding|0005524||IEA;go_process=leucyl-tRNA aminoacylation|0006429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008456064.1;locus_tag=L2557_RS01545;product=leucine--tRNA ligase;protein_id=WP_075671578.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 44486 45211 . - . ID=gene-L2557_RS01550;Name=L2557_RS01550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01550 NZ_JAIKUA010000015.1 Protein Homology CDS 44486 45211 . - 0 ID=cds-WP_075671580.1;Parent=gene-L2557_RS01550;Dbxref=GenBank:WP_075671580.1;Name=WP_075671580.1;Ontology_term=GO:0005524,GO:0015424,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ABC-type amino acid transporter activity|0015424||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020245804.1;locus_tag=L2557_RS01550;product=amino acid ABC transporter ATP-binding protein;protein_id=WP_075671580.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 45212 45886 . - . ID=gene-L2557_RS01555;Name=gltK;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=L2557_RS01555 NZ_JAIKUA010000015.1 Protein Homology CDS 45212 45886 . - 0 ID=cds-WP_006537724.1;Parent=gene-L2557_RS01555;Dbxref=GenBank:WP_006537724.1;Name=WP_006537724.1;gbkey=CDS;gene=gltK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537724.1;locus_tag=L2557_RS01555;product=glutamate/aspartate ABC transporter permease GltK;protein_id=WP_006537724.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 45886 46626 . - . ID=gene-L2557_RS01560;Name=L2557_RS01560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01560 NZ_JAIKUA010000015.1 Protein Homology CDS 45886 46626 . - 0 ID=cds-WP_099660172.1;Parent=gene-L2557_RS01560;Dbxref=GenBank:WP_099660172.1;Name=WP_099660172.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308720.1;locus_tag=L2557_RS01560;product=amino acid ABC transporter permease;protein_id=WP_099660172.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 46742 47635 . - . ID=gene-L2557_RS01565;Name=L2557_RS01565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01565 NZ_JAIKUA010000015.1 Protein Homology CDS 46742 47635 . - 0 ID=cds-WP_075671582.1;Parent=gene-L2557_RS01565;Dbxref=GenBank:WP_075671582.1;Name=WP_075671582.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246040.1;locus_tag=L2557_RS01565;product=amino acid ABC transporter substrate-binding protein;protein_id=WP_075671582.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 48001 48390 . + . ID=gene-L2557_RS01570;Name=L2557_RS01570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01570 NZ_JAIKUA010000015.1 Protein Homology CDS 48001 48390 . + 0 ID=cds-WP_075671584.1;Parent=gene-L2557_RS01570;Dbxref=GenBank:WP_075671584.1;Name=WP_075671584.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246039.1;locus_tag=L2557_RS01570;product=metal resistance protein;protein_id=WP_075671584.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 48475 50514 . + . ID=gene-L2557_RS01575;Name=L2557_RS01575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01575 NZ_JAIKUA010000015.1 Protein Homology CDS 48475 50514 . + 0 ID=cds-WP_099660173.1;Parent=gene-L2557_RS01575;Dbxref=GenBank:WP_099660173.1;Name=WP_099660173.1;Ontology_term=GO:0009055,GO:0015036;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628837.1;locus_tag=L2557_RS01575;product=protein-disulfide reductase DsbD family protein;protein_id=WP_099660173.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 50514 51245 . + . ID=gene-L2557_RS01580;Name=L2557_RS01580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01580 NZ_JAIKUA010000015.1 Protein Homology CDS 50514 51245 . + 0 ID=cds-WP_075671589.1;Parent=gene-L2557_RS01580;Dbxref=GenBank:WP_075671589.1;Name=WP_075671589.1;Ontology_term=GO:0015036;gbkey=CDS;go_function=disulfide oxidoreductase activity|0015036||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247442.1;locus_tag=L2557_RS01580;product=DsbA family protein;protein_id=WP_075671589.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 51245 51748 . + . ID=gene-L2557_RS01585;Name=L2557_RS01585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01585 NZ_JAIKUA010000015.1 Protein Homology CDS 51245 51748 . + 0 ID=cds-WP_075671591.1;Parent=gene-L2557_RS01585;Dbxref=GenBank:WP_075671591.1;Name=WP_075671591.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252236.1;locus_tag=L2557_RS01585;product=protein disulfide oxidoreductase;protein_id=WP_075671591.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 51757 52443 . - . ID=gene-L2557_RS01590;Name=L2557_RS01590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01590 NZ_JAIKUA010000015.1 Protein Homology CDS 51757 52443 . - 0 ID=cds-WP_075671593.1;Parent=gene-L2557_RS01590;Dbxref=GenBank:WP_075671593.1;Name=WP_075671593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246035.1;locus_tag=L2557_RS01590;product=hypothetical protein;protein_id=WP_075671593.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 52514 54037 . - . ID=gene-L2557_RS01595;Name=lnt;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=L2557_RS01595 NZ_JAIKUA010000015.1 Protein Homology CDS 52514 54037 . - 0 ID=cds-WP_099660175.1;Parent=gene-L2557_RS01595;Dbxref=GenBank:WP_099660175.1;Name=WP_099660175.1;Ontology_term=GO:0042158,GO:0016410,GO:0016020;gbkey=CDS;gene=lnt;go_component=membrane|0016020||IEA;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipoprotein biosynthetic process|0042158||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247445.1;locus_tag=L2557_RS01595;product=apolipoprotein N-acyltransferase;protein_id=WP_099660175.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 54045 54926 . - . ID=gene-L2557_RS01600;Name=corC;gbkey=Gene;gene=corC;gene_biotype=protein_coding;locus_tag=L2557_RS01600 NZ_JAIKUA010000015.1 Protein Homology CDS 54045 54926 . - 0 ID=cds-WP_023581153.1;Parent=gene-L2557_RS01600;Dbxref=GenBank:WP_023581153.1;Name=WP_023581153.1;Note=CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter (CNNM) family%2C and was characterized as belonging to a set of three proteins%2C at least one of which must be present for CorA to function.;Ontology_term=GO:0050660;gbkey=CDS;gene=corC;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246033.1;locus_tag=L2557_RS01600;product=CNNM family magnesium/cobalt transport protein CorC;protein_id=WP_023581153.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 54998 55465 . - . ID=gene-L2557_RS01605;Name=ybeY;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=L2557_RS01605 NZ_JAIKUA010000015.1 Protein Homology CDS 54998 55465 . - 0 ID=cds-WP_075671597.1;Parent=gene-L2557_RS01605;Dbxref=GenBank:WP_075671597.1;Name=WP_075671597.1;Ontology_term=GO:0042254,GO:0004540,GO:0046872;gbkey=CDS;gene=ybeY;go_function=RNA nuclease activity|0004540||IEA,metal ion binding|0046872||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537714.1;locus_tag=L2557_RS01605;product=rRNA maturation RNase YbeY;protein_id=WP_075671597.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 55458 56519 . - . ID=gene-L2557_RS01610;Name=L2557_RS01610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01610 NZ_JAIKUA010000015.1 Protein Homology CDS 55458 56519 . - 0 ID=cds-WP_036912056.1;Parent=gene-L2557_RS01610;Dbxref=GenBank:WP_036912056.1;Name=WP_036912056.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246031.1;locus_tag=L2557_RS01610;product=PhoH family protein;protein_id=WP_036912056.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 56548 57978 . - . ID=gene-L2557_RS01615;Name=miaB;gbkey=Gene;gene=miaB;gene_biotype=protein_coding;locus_tag=L2557_RS01615 NZ_JAIKUA010000015.1 Protein Homology CDS 56548 57978 . - 0 ID=cds-WP_075671599.1;Parent=gene-L2557_RS01615;Dbxref=GenBank:WP_075671599.1;Name=WP_075671599.1;Ontology_term=GO:0006400,GO:0016782,GO:0051539,GO:1904047;gbkey=CDS;gene=miaB;go_function=transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537711.1;locus_tag=L2557_RS01615;product=tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB;protein_id=WP_075671599.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 58183 59370 . + . ID=gene-L2557_RS01620;Name=ubiF;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;locus_tag=L2557_RS01620 NZ_JAIKUA010000015.1 Protein Homology CDS 58183 59370 . + 0 ID=cds-WP_083629071.1;Parent=gene-L2557_RS01620;Dbxref=GenBank:WP_083629071.1;Name=WP_083629071.1;Ontology_term=GO:0006744,GO:0016709;gbkey=CDS;gene=ubiF;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247447.1;locus_tag=L2557_RS01620;product=3-demethoxyubiquinol 3-hydroxylase;protein_id=WP_083629071.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 59425 60255 . - . ID=gene-L2557_RS01625;Name=fghA;gbkey=Gene;gene=fghA;gene_biotype=protein_coding;locus_tag=L2557_RS01625 NZ_JAIKUA010000015.1 Protein Homology CDS 59425 60255 . - 0 ID=cds-WP_159241862.1;Parent=gene-L2557_RS01625;Dbxref=GenBank:WP_159241862.1;Name=WP_159241862.1;Ontology_term=GO:0046294,GO:0018738;gbkey=CDS;gene=fghA;go_function=S-formylglutathione hydrolase activity|0018738||IEA;go_process=formaldehyde catabolic process|0046294||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827456.1;locus_tag=L2557_RS01625;product=S-formylglutathione hydrolase;protein_id=WP_159241862.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 60309 61421 . - . ID=gene-L2557_RS01630;Name=L2557_RS01630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01630 NZ_JAIKUA010000015.1 Protein Homology CDS 60309 61421 . - 0 ID=cds-WP_075671603.1;Parent=gene-L2557_RS01630;Dbxref=GenBank:WP_075671603.1;Name=WP_075671603.1;Ontology_term=GO:0004022,GO:0008270,GO:0051903;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,zinc ion binding|0008270||IEA,S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity|0051903||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013202337.1;locus_tag=L2557_RS01630;product=S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase;protein_id=WP_075671603.1;transl_table=11 NZ_JAIKUA010000015.1 RefSeq gene 61441 61716 . - . ID=gene-L2557_RS01635;Name=L2557_RS01635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01635 NZ_JAIKUA010000015.1 Protein Homology CDS 61441 61716 . - 0 ID=cds-WP_036938507.1;Parent=gene-L2557_RS01635;Dbxref=GenBank:WP_036938507.1;Name=WP_036938507.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017384071.1;locus_tag=L2557_RS01635;product=metal-sensing transcriptional repressor;protein_id=WP_036938507.1;transl_table=11 ##sequence-region NZ_JAIKUA010000150.1 1 17195 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000150.1 RefSeq region 1 17195 . + . ID=NZ_JAIKUA010000150.1:1..17195;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000150.1 RefSeq gene 229 444 . - . ID=gene-L2557_RS10325;Name=L2557_RS10325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10325 NZ_JAIKUA010000150.1 Protein Homology CDS 229 444 . - 0 ID=cds-WP_023581324.1;Parent=gene-L2557_RS10325;Dbxref=GenBank:WP_023581324.1;Name=WP_023581324.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247631.1;locus_tag=L2557_RS10325;product=cold-shock protein;protein_id=WP_023581324.1;transl_table=11 NZ_JAIKUA010000150.1 RefSeq gene 960 1949 . - . ID=gene-L2557_RS10330;Name=lpxK;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=L2557_RS10330 NZ_JAIKUA010000150.1 Protein Homology CDS 960 1949 . - 0 ID=cds-WP_075673556.1;Parent=gene-L2557_RS10330;Dbxref=GenBank:WP_075673556.1;Name=WP_075673556.1;Ontology_term=GO:0009245,GO:0009029;gbkey=CDS;gene=lpxK;go_function=lipid-A 4'-kinase activity|0009029||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657930.1;locus_tag=L2557_RS10330;product=tetraacyldisaccharide 4'-kinase;protein_id=WP_075673556.1;transl_table=11 NZ_JAIKUA010000150.1 RefSeq gene 1946 3691 . - . ID=gene-L2557_RS10335;Name=msbA;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=L2557_RS10335 NZ_JAIKUA010000150.1 Protein Homology CDS 1946 3691 . - 0 ID=cds-WP_075673555.1;Parent=gene-L2557_RS10335;Dbxref=GenBank:WP_075673555.1;Name=WP_075673555.1;Ontology_term=GO:0055085,GO:0005524,GO:0034040,GO:0140359,GO:0016020;gbkey=CDS;gene=msbA;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537416.1;locus_tag=L2557_RS10335;product=lipid A ABC transporter ATP-binding protein/permease MsbA;protein_id=WP_075673555.1;transl_table=11 NZ_JAIKUA010000150.1 RefSeq gene 3728 5965 . - . ID=gene-L2557_RS10340;Name=L2557_RS10340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10340 NZ_JAIKUA010000150.1 Protein Homology CDS 3728 5965 . - 0 ID=cds-WP_235410027.1;Parent=gene-L2557_RS10340;Dbxref=GenBank:WP_235410027.1;Name=WP_235410027.1;Ontology_term=GO:0009290,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=DNA import into cell involved in transformation|0009290||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827045.1;locus_tag=L2557_RS10340;product=DNA internalization-related competence protein ComEC/Rec2;protein_id=WP_235410027.1;transl_table=11 NZ_JAIKUA010000150.1 RefSeq gene 6511 6798 . - . ID=gene-L2557_RS10345;Name=ihfB;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=L2557_RS10345 NZ_JAIKUA010000150.1 Protein Homology CDS 6511 6798 . - 0 ID=cds-WP_004244587.1;Parent=gene-L2557_RS10345;Dbxref=GenBank:WP_004244587.1;Name=WP_004244587.1;Ontology_term=GO:0006310,GO:0006355,GO:0006417,GO:0075713,GO:0003677,GO:0005694;gbkey=CDS;gene=ihfB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,regulation of DNA-templated transcription|0006355||IEA,regulation of translation|0006417||IEA,establishment of integrated proviral latency|0075713||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244587.1;locus_tag=L2557_RS10345;product=integration host factor subunit beta;protein_id=WP_004244587.1;transl_table=11 NZ_JAIKUA010000150.1 RefSeq gene 6863 8536 . - . ID=gene-L2557_RS10350;Name=rpsA;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=L2557_RS10350 NZ_JAIKUA010000150.1 Protein Homology CDS 6863 8536 . - 0 ID=cds-WP_006537421.1;Parent=gene-L2557_RS10350;Dbxref=GenBank:WP_006537421.1;Name=WP_006537421.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsA;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123560.1;locus_tag=L2557_RS10350;product=30S ribosomal protein S1;protein_id=WP_006537421.1;transl_table=11 NZ_JAIKUA010000150.1 RefSeq gene 8710 9396 . - . ID=gene-L2557_RS10355;Name=cmk;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=L2557_RS10355 NZ_JAIKUA010000150.1 Protein Homology CDS 8710 9396 . - 0 ID=cds-WP_075673553.1;Parent=gene-L2557_RS10355;Dbxref=GenBank:WP_075673553.1;Name=WP_075673553.1;Ontology_term=GO:0015949,GO:0005524,GO:0036431;gbkey=CDS;gene=cmk;go_function=ATP binding|0005524||IEA,dCMP kinase activity|0036431||IEA;go_process=nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010846912.1;locus_tag=L2557_RS10355;product=(d)CMP kinase;protein_id=WP_075673553.1;transl_table=11 NZ_JAIKUA010000150.1 RefSeq gene 9709 10995 . - . ID=gene-L2557_RS10360;Name=aroA;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=L2557_RS10360 NZ_JAIKUA010000150.1 Protein Homology CDS 9709 10995 . - 0 ID=cds-WP_099659769.1;Parent=gene-L2557_RS10360;Dbxref=GenBank:WP_099659769.1;Name=WP_099659769.1;Ontology_term=GO:0009073,GO:0003866;gbkey=CDS;gene=aroA;go_function=3-phosphoshikimate 1-carboxyvinyltransferase activity|0003866||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015834961.1;locus_tag=L2557_RS10360;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=WP_099659769.1;transl_table=11 NZ_JAIKUA010000150.1 RefSeq gene 11198 12286 . - . ID=gene-L2557_RS10365;Name=serC;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=L2557_RS10365 NZ_JAIKUA010000150.1 Protein Homology CDS 11198 12286 . - 0 ID=cds-WP_023581318.1;Parent=gene-L2557_RS10365;Dbxref=GenBank:WP_023581318.1;Name=WP_023581318.1;Ontology_term=GO:0006564,GO:0003824,GO:0004648;gbkey=CDS;gene=serC;go_function=catalytic activity|0003824||IEA,O-phospho-L-serine:2-oxoglutarate aminotransferase activity|0004648||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244582.1;locus_tag=L2557_RS10365;product=3-phosphoserine/phosphohydroxythreonine transaminase;protein_id=WP_023581318.1;transl_table=11 NZ_JAIKUA010000150.1 RefSeq gene 12423 13853 . + . ID=gene-L2557_RS10370;Name=L2557_RS10370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10370 NZ_JAIKUA010000150.1 Protein Homology CDS 12423 13853 . + 0 ID=cds-WP_235410026.1;Parent=gene-L2557_RS10370;Dbxref=GenBank:WP_235410026.1;Name=WP_235410026.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367710.1;locus_tag=L2557_RS10370;product=MFS transporter;protein_id=WP_235410026.1;transl_table=11 NZ_JAIKUA010000150.1 RefSeq gene 13922 14959 . - . ID=gene-L2557_RS10375;Name=ansB;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=L2557_RS10375 NZ_JAIKUA010000150.1 Protein Homology CDS 13922 14959 . - 0 ID=cds-WP_083629111.1;Parent=gene-L2557_RS10375;Dbxref=GenBank:WP_083629111.1;Name=WP_083629111.1;Ontology_term=GO:0006528,GO:0004067;gbkey=CDS;gene=ansB;go_function=asparaginase activity|0004067||IEA;go_process=asparagine metabolic process|0006528||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827046.1;locus_tag=L2557_RS10375;product=L-asparaginase 2;protein_id=WP_083629111.1;transl_table=11 NZ_JAIKUA010000150.1 RefSeq gene 15188 16945 . + . ID=gene-L2557_RS10380;Name=ycaO;gbkey=Gene;gene=ycaO;gene_biotype=protein_coding;locus_tag=L2557_RS10380 NZ_JAIKUA010000150.1 Protein Homology CDS 15188 16945 . + 0 ID=cds-WP_099659771.1;Parent=gene-L2557_RS10380;Dbxref=GenBank:WP_099659771.1;Name=WP_099659771.1;gbkey=CDS;gene=ycaO;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628443.1;locus_tag=L2557_RS10380;product=30S ribosomal protein S12 methylthiotransferase accessory factor YcaO;protein_id=WP_099659771.1;transl_table=11 ##sequence-region NZ_JAIKUA010000151.1 1 22123 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000151.1 RefSeq region 1 22123 . + . ID=NZ_JAIKUA010000151.1:1..22123;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000151.1 RefSeq gene 1 1037 . + . ID=gene-L2557_RS10385;Name=L2557_RS10385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10385;partial=true;start_range=.,1 NZ_JAIKUA010000151.1 Protein Homology CDS 1 1037 . + 2 ID=cds-WP_235410028.1;Parent=gene-L2557_RS10385;Dbxref=GenBank:WP_235410028.1;Name=WP_235410028.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015737.6;locus_tag=L2557_RS10385;partial=true;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_235410028.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000151.1 RefSeq gene 1114 1758 . - . ID=gene-L2557_RS10390;Name=L2557_RS10390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10390 NZ_JAIKUA010000151.1 Protein Homology CDS 1114 1758 . - 0 ID=cds-WP_075673452.1;Parent=gene-L2557_RS10390;Dbxref=GenBank:WP_075673452.1;Name=WP_075673452.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242066.1;locus_tag=L2557_RS10390;product=ATP-binding cassette domain-containing protein;protein_id=WP_075673452.1;transl_table=11 NZ_JAIKUA010000151.1 RefSeq gene 1818 2615 . - . ID=gene-L2557_RS10395;Name=L2557_RS10395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10395 NZ_JAIKUA010000151.1 Protein Homology CDS 1818 2615 . - 0 ID=cds-WP_075673451.1;Parent=gene-L2557_RS10395;Dbxref=GenBank:WP_075673451.1;Name=WP_075673451.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536149.1;locus_tag=L2557_RS10395;product=ATP-binding cassette domain-containing protein;protein_id=WP_075673451.1;transl_table=11 NZ_JAIKUA010000151.1 RefSeq gene 2609 3421 . - . ID=gene-L2557_RS10400;Name=L2557_RS10400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10400 NZ_JAIKUA010000151.1 Protein Homology CDS 2609 3421 . - 0 ID=cds-WP_099659716.1;Parent=gene-L2557_RS10400;Dbxref=GenBank:WP_099659716.1;Name=WP_099659716.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245680.1;locus_tag=L2557_RS10400;product=ABC transporter permease;protein_id=WP_099659716.1;transl_table=11 NZ_JAIKUA010000151.1 RefSeq gene 3418 4401 . - . ID=gene-L2557_RS10405;Name=L2557_RS10405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10405 NZ_JAIKUA010000151.1 Protein Homology CDS 3418 4401 . - 0 ID=cds-WP_075673449.1;Parent=gene-L2557_RS10405;Dbxref=GenBank:WP_075673449.1;Name=WP_075673449.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368416.1;locus_tag=L2557_RS10405;product=ABC transporter permease;protein_id=WP_075673449.1;transl_table=11 NZ_JAIKUA010000151.1 RefSeq gene 4386 5969 . - . ID=gene-L2557_RS10410;Name=L2557_RS10410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10410 NZ_JAIKUA010000151.1 Protein Homology CDS 4386 5969 . - 0 ID=cds-WP_099659717.1;Parent=gene-L2557_RS10410;Dbxref=GenBank:WP_099659717.1;Name=WP_099659717.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082126.1;locus_tag=L2557_RS10410;product=ABC transporter substrate-binding protein;protein_id=WP_099659717.1;transl_table=11 NZ_JAIKUA010000151.1 RefSeq gene 6375 7364 . - . ID=gene-L2557_RS10415;Name=L2557_RS10415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10415 NZ_JAIKUA010000151.1 Protein Homology CDS 6375 7364 . - 0 ID=cds-WP_099659718.1;Parent=gene-L2557_RS10415;Dbxref=GenBank:WP_099659718.1;Name=WP_099659718.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536155.1;locus_tag=L2557_RS10415;product=glycosyltransferase;protein_id=WP_099659718.1;transl_table=11 NZ_JAIKUA010000151.1 RefSeq gene 7746 9119 . + . ID=gene-L2557_RS10420;Name=L2557_RS10420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10420 NZ_JAIKUA010000151.1 Protein Homology CDS 7746 9119 . + 0 ID=cds-WP_098941872.1;Parent=gene-L2557_RS10420;Dbxref=GenBank:WP_098941872.1;Name=WP_098941872.1;Ontology_term=GO:0016310,GO:0004674,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013578107.1;locus_tag=L2557_RS10420;product=type II toxin-antitoxin system HipA family toxin;protein_id=WP_098941872.1;transl_table=11 NZ_JAIKUA010000151.1 RefSeq gene 9116 9493 . + . ID=gene-L2557_RS10425;Name=L2557_RS10425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10425 NZ_JAIKUA010000151.1 Protein Homology CDS 9116 9493 . + 0 ID=cds-WP_098941871.1;Parent=gene-L2557_RS10425;Dbxref=GenBank:WP_098941871.1;Name=WP_098941871.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013578106.1;locus_tag=L2557_RS10425;product=helix-turn-helix transcriptional regulator;protein_id=WP_098941871.1;transl_table=11 NZ_JAIKUA010000151.1 RefSeq gene 9615 10115 . - . ID=gene-L2557_RS10430;Name=hycI;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=L2557_RS10430 NZ_JAIKUA010000151.1 Protein Homology CDS 9615 10115 . - 0 ID=cds-WP_075673444.1;Parent=gene-L2557_RS10430;Dbxref=GenBank:WP_075673444.1;Name=WP_075673444.1;Ontology_term=GO:0036211,GO:0004190;gbkey=CDS;gene=hycI;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245684.1;locus_tag=L2557_RS10430;product=hydrogenase maturation peptidase HycI;protein_id=WP_075673444.1;transl_table=11 NZ_JAIKUA010000151.1 RefSeq gene 10112 10522 . - . ID=gene-L2557_RS10435;Name=L2557_RS10435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10435 NZ_JAIKUA010000151.1 Protein Homology CDS 10112 10522 . - 0 ID=cds-WP_075673443.1;Parent=gene-L2557_RS10435;Dbxref=GenBank:WP_075673443.1;Name=WP_075673443.1;Ontology_term=GO:0065003;gbkey=CDS;go_process=protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245685.1;locus_tag=L2557_RS10435;product=formate hydrogenlyase maturation HycH family protein;protein_id=WP_075673443.1;transl_table=11 NZ_JAIKUA010000151.1 RefSeq gene 10515 11297 . - . ID=gene-L2557_RS10440;Name=L2557_RS10440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10440 NZ_JAIKUA010000151.1 Protein Homology CDS 10515 11297 . - 0 ID=cds-WP_099659719.1;Parent=gene-L2557_RS10440;Dbxref=GenBank:WP_099659719.1;Name=WP_099659719.1;Ontology_term=GO:0022900,GO:0008137,GO:0048038,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,quinone binding|0048038||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004240591.1;locus_tag=L2557_RS10440;product=NADH-quinone oxidoreductase subunit B family protein;protein_id=WP_099659719.1;transl_table=11 NZ_JAIKUA010000151.1 RefSeq gene 11294 11848 . - . ID=gene-L2557_RS10445;Name=hyfH;gbkey=Gene;gene=hyfH;gene_biotype=protein_coding;locus_tag=L2557_RS10445 NZ_JAIKUA010000151.1 Protein Homology CDS 11294 11848 . - 0 ID=cds-WP_075673442.1;Parent=gene-L2557_RS10445;Dbxref=GenBank:WP_075673442.1;Name=WP_075673442.1;gbkey=CDS;gene=hyfH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245688.1;locus_tag=L2557_RS10445;product=hydrogenase 4 subunit H;protein_id=WP_075673442.1;transl_table=11 NZ_JAIKUA010000151.1 RefSeq gene 11860 13593 . - . ID=gene-L2557_RS10450;Name=L2557_RS10450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10450 NZ_JAIKUA010000151.1 Protein Homology CDS 11860 13593 . - 0 ID=cds-WP_075673441.1;Parent=gene-L2557_RS10450;Dbxref=GenBank:WP_075673441.1;Name=WP_075673441.1;Ontology_term=GO:0022900,GO:0008137,GO:0048038,GO:0051539,GO:1990204;gbkey=CDS;go_component=oxidoreductase complex|1990204||IEA;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA,quinone binding|0048038||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004240592.1;locus_tag=L2557_RS10450;product=hydrogenase large subunit;protein_id=WP_075673441.1;transl_table=11 NZ_JAIKUA010000151.1 RefSeq gene 13595 15163 . - . ID=gene-L2557_RS10455;Name=L2557_RS10455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10455 NZ_JAIKUA010000151.1 Protein Homology CDS 13595 15163 . - 0 ID=cds-WP_075673440.1;Parent=gene-L2557_RS10455;Dbxref=GenBank:WP_075673440.1;Name=WP_075673440.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536161.1;locus_tag=L2557_RS10455;product=hydrogenase 4 subunit F;protein_id=WP_075673440.1;transl_table=11 NZ_JAIKUA010000151.1 RefSeq gene 15168 15818 . - . ID=gene-L2557_RS10460;Name=hyfE;gbkey=Gene;gene=hyfE;gene_biotype=protein_coding;locus_tag=L2557_RS10460 NZ_JAIKUA010000151.1 Protein Homology CDS 15168 15818 . - 0 ID=cds-WP_036934333.1;Parent=gene-L2557_RS10460;Dbxref=GenBank:WP_036934333.1;Name=WP_036934333.1;gbkey=CDS;gene=hyfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245691.1;locus_tag=L2557_RS10460;product=hydrogenase 4 membrane subunit;protein_id=WP_036934333.1;transl_table=11 NZ_JAIKUA010000151.1 RefSeq gene 15831 17282 . - . ID=gene-L2557_RS10465;Name=L2557_RS10465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10465 NZ_JAIKUA010000151.1 Protein Homology CDS 15831 17282 . - 0 ID=cds-WP_075673439.1;Parent=gene-L2557_RS10465;Dbxref=GenBank:WP_075673439.1;Name=WP_075673439.1;Ontology_term=GO:0008137;gbkey=CDS;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245692.1;locus_tag=L2557_RS10465;product=hydrogenase 4 subunit D;protein_id=WP_075673439.1;transl_table=11 NZ_JAIKUA010000151.1 RefSeq gene 17289 18239 . - . ID=gene-L2557_RS10470;Name=L2557_RS10470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10470 NZ_JAIKUA010000151.1 Protein Homology CDS 17289 18239 . - 0 ID=cds-WP_069369756.1;Parent=gene-L2557_RS10470;Dbxref=GenBank:WP_069369756.1;Name=WP_069369756.1;Ontology_term=GO:0022900,GO:0016491,GO:0005886,GO:0016020,GO:1990204;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA,oxidoreductase complex|1990204||IEA;go_function=oxidoreductase activity|0016491||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658442.1;locus_tag=L2557_RS10470;product=respiratory chain complex I subunit 1 family protein;protein_id=WP_069369756.1;transl_table=11 NZ_JAIKUA010000151.1 RefSeq gene 18252 20267 . - . ID=gene-L2557_RS10475;Name=hyfB;gbkey=Gene;gene=hyfB;gene_biotype=protein_coding;locus_tag=L2557_RS10475 NZ_JAIKUA010000151.1 Protein Homology CDS 18252 20267 . - 0 ID=cds-WP_235410029.1;Parent=gene-L2557_RS10475;Dbxref=GenBank:WP_235410029.1;Name=WP_235410029.1;Ontology_term=GO:0042773,GO:0008137;gbkey=CDS;gene=hyfB;go_function=NADH dehydrogenase (ubiquinone) activity|0008137||IEA;go_process=ATP synthesis coupled electron transport|0042773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536165.1;locus_tag=L2557_RS10475;product=hydrogenase 4 subunit B;protein_id=WP_235410029.1;transl_table=11 NZ_JAIKUA010000151.1 RefSeq gene 20269 20889 . - . ID=gene-L2557_RS10480;Name=L2557_RS10480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10480 NZ_JAIKUA010000151.1 Protein Homology CDS 20269 20889 . - 0 ID=cds-WP_075673437.1;Parent=gene-L2557_RS10480;Dbxref=GenBank:WP_075673437.1;Name=WP_075673437.1;Ontology_term=GO:0009061,GO:0019645,GO:0046872,GO:0051539;gbkey=CDS;go_function=metal ion binding|0046872||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=anaerobic respiration|0009061||IEA,anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245695.1;locus_tag=L2557_RS10480;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_075673437.1;transl_table=11 NZ_JAIKUA010000151.1 RefSeq gene 21208 22104 . - . ID=gene-L2557_RS10485;Name=L2557_RS10485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10485 NZ_JAIKUA010000151.1 Protein Homology CDS 21208 22104 . - 0 ID=cds-WP_099659721.1;Parent=gene-L2557_RS10485;Dbxref=GenBank:WP_099659721.1;Name=WP_099659721.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004255980.1;locus_tag=L2557_RS10485;product=pirin family protein;protein_id=WP_099659721.1;transl_table=11 ##sequence-region NZ_JAIKUA010000152.1 1 5144 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000152.1 RefSeq region 1 5144 . + . ID=NZ_JAIKUA010000152.1:1..5144;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000152.1 RefSeq gene 1 1570 . + . ID=gene-L2557_RS10490;Name=L2557_RS10490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10490;partial=true;start_range=.,1 NZ_JAIKUA010000152.1 Protein Homology CDS 1 1570 . + 1 ID=cds-WP_268830862.1;Parent=gene-L2557_RS10490;Dbxref=GenBank:WP_268830862.1;Name=WP_268830862.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537449.1;locus_tag=L2557_RS10490;partial=true;product=DNA translocase FtsK;protein_id=WP_268830862.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000152.1 RefSeq gene 1684 2292 . + . ID=gene-L2557_RS10495;Name=lolA;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=L2557_RS10495 NZ_JAIKUA010000152.1 Protein Homology CDS 1684 2292 . + 0 ID=cds-WP_075672453.1;Parent=gene-L2557_RS10495;Dbxref=GenBank:WP_075672453.1;Name=WP_075672453.1;Ontology_term=GO:0042953,GO:0042597;gbkey=CDS;gene=lolA;go_component=periplasmic space|0042597||IEA;go_process=lipoprotein transport|0042953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812282.1;locus_tag=L2557_RS10495;product=outer membrane lipoprotein chaperone LolA;protein_id=WP_075672453.1;transl_table=11 NZ_JAIKUA010000152.1 RefSeq gene 2300 3649 . + . ID=gene-L2557_RS10500;Name=L2557_RS10500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10500 NZ_JAIKUA010000152.1 Protein Homology CDS 2300 3649 . + 0 ID=cds-WP_099659844.1;Parent=gene-L2557_RS10500;Dbxref=GenBank:WP_099659844.1;Name=WP_099659844.1;Ontology_term=GO:0006260,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367706.1;locus_tag=L2557_RS10500;product=replication-associated recombination protein A;protein_id=WP_099659844.1;transl_table=11 NZ_JAIKUA010000152.1 RefSeq gene 3767 5056 . + . ID=gene-L2557_RS10505;Name=serS;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=L2557_RS10505 NZ_JAIKUA010000152.1 Protein Homology CDS 3767 5056 . + 0 ID=cds-WP_069368177.1;Parent=gene-L2557_RS10505;Dbxref=GenBank:WP_069368177.1;Name=WP_069368177.1;Ontology_term=GO:0006434,GO:0000166,GO:0004828,GO:0005524;gbkey=CDS;gene=serS;go_function=nucleotide binding|0000166||IEA,serine-tRNA ligase activity|0004828||IEA,ATP binding|0005524||IEA;go_process=seryl-tRNA aminoacylation|0006434||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000887397.1;locus_tag=L2557_RS10505;product=serine--tRNA ligase;protein_id=WP_069368177.1;transl_table=11 ##sequence-region NZ_JAIKUA010000153.1 1 604 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000153.1 RefSeq region 1 604 . + . ID=NZ_JAIKUA010000153.1:1..604;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000153.1 RefSeq gene 35 604 . + . ID=gene-L2557_RS10510;Name=L2557_RS10510;end_range=604,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10510;partial=true NZ_JAIKUA010000153.1 Protein Homology CDS 35 604 . + 0 ID=cds-WP_235410030.1;Parent=gene-L2557_RS10510;Dbxref=GenBank:WP_235410030.1;Name=WP_235410030.1;end_range=604,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013003.6;locus_tag=L2557_RS10510;partial=true;product=pentapeptide repeat-containing protein;protein_id=WP_235410030.1;transl_table=11 ##sequence-region NZ_JAIKUA010000154.1 1 7745 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000154.1 RefSeq region 1 7745 . + . ID=NZ_JAIKUA010000154.1:1..7745;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000154.1 RefSeq gene 289 1878 . + . ID=gene-L2557_RS10515;Name=purH;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=L2557_RS10515 NZ_JAIKUA010000154.1 Protein Homology CDS 289 1878 . + 0 ID=cds-WP_075673763.1;Parent=gene-L2557_RS10515;Dbxref=GenBank:WP_075673763.1;Name=WP_075673763.1;Ontology_term=GO:0009152,GO:0003937,GO:0004643;gbkey=CDS;gene=purH;go_function=IMP cyclohydrolase activity|0003937||IEA,phosphoribosylaminoimidazolecarboxamide formyltransferase activity|0004643||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_709800.1;locus_tag=L2557_RS10515;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=WP_075673763.1;transl_table=11 NZ_JAIKUA010000154.1 RefSeq gene 1891 3180 . + . ID=gene-L2557_RS10520;Name=purD;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=L2557_RS10520 NZ_JAIKUA010000154.1 Protein Homology CDS 1891 3180 . + 0 ID=cds-WP_075673762.1;Parent=gene-L2557_RS10520;Dbxref=GenBank:WP_075673762.1;Name=WP_075673762.1;Ontology_term=GO:0009113,GO:0004637;gbkey=CDS;gene=purD;go_function=phosphoribosylamine-glycine ligase activity|0004637||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368502.1;locus_tag=L2557_RS10520;product=phosphoribosylamine--glycine ligase;protein_id=WP_075673762.1;transl_table=11 NZ_JAIKUA010000154.1 RefSeq gene 3205 3867 . - . ID=gene-L2557_RS10525;Name=L2557_RS10525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10525 NZ_JAIKUA010000154.1 Protein Homology CDS 3205 3867 . - 0 ID=cds-WP_223672925.1;Parent=gene-L2557_RS10525;Dbxref=GenBank:WP_223672925.1;Name=WP_223672925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012776595.1;locus_tag=L2557_RS10525;product=DUF1481 domain-containing protein;protein_id=WP_223672925.1;transl_table=11 NZ_JAIKUA010000154.1 RefSeq gene 3912 4184 . - . ID=gene-L2557_RS10530;Name=L2557_RS10530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10530 NZ_JAIKUA010000154.1 Protein Homology CDS 3912 4184 . - 0 ID=cds-WP_004246922.1;Parent=gene-L2557_RS10530;Dbxref=GenBank:WP_004246922.1;Name=WP_004246922.1;Ontology_term=GO:0030261,GO:0003677,GO:0030527;gbkey=CDS;go_function=DNA binding|0003677||IEA,structural constituent of chromatin|0030527||IEA;go_process=chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017460010.1;locus_tag=L2557_RS10530;product=HU family DNA-binding protein;protein_id=WP_004246922.1;transl_table=11 NZ_JAIKUA010000154.1 RefSeq gene 4375 4965 . - . ID=gene-L2557_RS10535;Name=L2557_RS10535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10535 NZ_JAIKUA010000154.1 Protein Homology CDS 4375 4965 . - 0 ID=cds-WP_075673760.1;Parent=gene-L2557_RS10535;Dbxref=GenBank:WP_075673760.1;Name=WP_075673760.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246921.1;locus_tag=L2557_RS10535;product=YjaG family protein;protein_id=WP_075673760.1;transl_table=11 NZ_JAIKUA010000154.1 RefSeq gene 5040 5708 . - . ID=gene-L2557_RS10540;Name=nfi;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=L2557_RS10540 NZ_JAIKUA010000154.1 Protein Homology CDS 5040 5708 . - 0 ID=cds-WP_075673759.1;Parent=gene-L2557_RS10540;Dbxref=GenBank:WP_075673759.1;Name=WP_075673759.1;Note=cleaves DNA at apurinic or apyrimidinic sites;Ontology_term=GO:0006281,GO:0004519;gbkey=CDS;gene=nfi;go_function=endonuclease activity|0004519||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246920.1;locus_tag=L2557_RS10540;product=deoxyribonuclease V;protein_id=WP_075673759.1;transl_table=11 NZ_JAIKUA010000154.1 RefSeq gene 5701 6774 . - . ID=gene-L2557_RS10545;Name=hemE;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=L2557_RS10545 NZ_JAIKUA010000154.1 Protein Homology CDS 5701 6774 . - 0 ID=cds-WP_235410031.1;Parent=gene-L2557_RS10545;Dbxref=GenBank:WP_235410031.1;Name=WP_235410031.1;Ontology_term=GO:0006779,GO:0004853;gbkey=CDS;gene=hemE;go_function=uroporphyrinogen decarboxylase activity|0004853||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250091.1;locus_tag=L2557_RS10545;product=uroporphyrinogen decarboxylase;protein_id=WP_235410031.1;transl_table=11 NZ_JAIKUA010000154.1 RefSeq gene 6863 7648 . - . ID=gene-L2557_RS10550;Name=nudC;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=L2557_RS10550 NZ_JAIKUA010000154.1 Protein Homology CDS 6863 7648 . - 0 ID=cds-WP_075673764.1;Parent=gene-L2557_RS10550;Dbxref=GenBank:WP_075673764.1;Name=WP_075673764.1;Ontology_term=GO:0000210,GO:0016787;gbkey=CDS;gene=nudC;go_function=NAD+ diphosphatase activity|0000210||IEA,hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250090.1;locus_tag=L2557_RS10550;product=NAD(+) diphosphatase;protein_id=WP_075673764.1;transl_table=11 ##sequence-region NZ_JAIKUA010000155.1 1 3247 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000155.1 RefSeq region 1 3247 . + . ID=NZ_JAIKUA010000155.1:1..3247;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000155.1 RefSeq gene 243 1469 . - . ID=gene-L2557_RS10555;Name=L2557_RS10555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10555 NZ_JAIKUA010000155.1 Protein Homology CDS 243 1469 . - 0 ID=cds-WP_099659261.1;Parent=gene-L2557_RS10555;Dbxref=GenBank:WP_099659261.1;Name=WP_099659261.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656471.1;locus_tag=L2557_RS10555;product=tyrosine-type recombinase/integrase;protein_id=WP_099659261.1;transl_table=11 NZ_JAIKUA010000155.1 RefSeq pseudogene 1702 1833 . - . ID=gene-L2557_RS10560;Name=L2557_RS10560;end_range=1833,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS10560;partial=true;pseudo=true NZ_JAIKUA010000155.1 Protein Homology CDS 1702 1833 . - 0 ID=cds-L2557_RS10560;Parent=gene-L2557_RS10560;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=1833,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001350488.1;locus_tag=L2557_RS10560;partial=true;product=integrase;pseudo=true;transl_table=11 NZ_JAIKUA010000155.1 RefSeq gene 2167 2706 . + . ID=gene-L2557_RS10565;Name=L2557_RS10565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10565 NZ_JAIKUA010000155.1 Protein Homology CDS 2167 2706 . + 0 ID=cds-WP_075674158.1;Parent=gene-L2557_RS10565;Dbxref=GenBank:WP_075674158.1;Name=WP_075674158.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017346792.1;locus_tag=L2557_RS10565;product=hypothetical protein;protein_id=WP_075674158.1;transl_table=11 NZ_JAIKUA010000155.1 RefSeq gene 2851 3159 . - . ID=gene-L2557_RS10570;Name=L2557_RS10570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10570 NZ_JAIKUA010000155.1 Protein Homology CDS 2851 3159 . - 0 ID=cds-WP_075674159.1;Parent=gene-L2557_RS10570;Dbxref=GenBank:WP_075674159.1;Name=WP_075674159.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533899.1;locus_tag=L2557_RS10570;product=helix-turn-helix domain-containing protein;protein_id=WP_075674159.1;transl_table=11 ##sequence-region NZ_JAIKUA010000156.1 1 11879 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000156.1 RefSeq region 1 11879 . + . ID=NZ_JAIKUA010000156.1:1..11879;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000156.1 RefSeq gene 57 7133 . + . ID=gene-L2557_RS10575;Name=L2557_RS10575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10575 NZ_JAIKUA010000156.1 Protein Homology CDS 57 7133 . + 0 ID=cds-WP_099659987.1;Parent=gene-L2557_RS10575;Dbxref=GenBank:WP_099659987.1;Name=WP_099659987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252622.1;locus_tag=L2557_RS10575;product=Ig-like domain-containing protein;protein_id=WP_099659987.1;transl_table=11 NZ_JAIKUA010000156.1 RefSeq gene 7290 10517 . - . ID=gene-L2557_RS10580;Name=carB;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=L2557_RS10580 NZ_JAIKUA010000156.1 Protein Homology CDS 7290 10517 . - 0 ID=cds-WP_075673715.1;Parent=gene-L2557_RS10580;Dbxref=GenBank:WP_075673715.1;Name=WP_075673715.1;Ontology_term=GO:0008152,GO:0005524,GO:0046872;gbkey=CDS;gene=carB;go_function=ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459072.1;locus_tag=L2557_RS10580;product=carbamoyl-phosphate synthase large subunit;protein_id=WP_075673715.1;transl_table=11 NZ_JAIKUA010000156.1 RefSeq gene 10535 11698 . - . ID=gene-L2557_RS10585;Name=carA;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=L2557_RS10585 NZ_JAIKUA010000156.1 Protein Homology CDS 10535 11698 . - 0 ID=cds-WP_235410032.1;Parent=gene-L2557_RS10585;Dbxref=GenBank:WP_235410032.1;Name=WP_235410032.1;Ontology_term=GO:0006207,GO:0006541,GO:0004088;gbkey=CDS;gene=carA;go_function=carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity|0004088||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA,glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367442.1;locus_tag=L2557_RS10585;product=glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit;protein_id=WP_235410032.1;transl_table=11 ##sequence-region NZ_JAIKUA010000157.1 1 5620 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000157.1 RefSeq region 1 5620 . + . ID=NZ_JAIKUA010000157.1:1..5620;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000157.1 RefSeq gene 191 1420 . + . ID=gene-L2557_RS10590;Name=L2557_RS10590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10590 NZ_JAIKUA010000157.1 Protein Homology CDS 191 1420 . + 0 ID=cds-WP_075673890.1;Parent=gene-L2557_RS10590;Dbxref=GenBank:WP_075673890.1;Name=WP_075673890.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250911.1;locus_tag=L2557_RS10590;product=sugar transporter;protein_id=WP_075673890.1;transl_table=11 NZ_JAIKUA010000157.1 RefSeq gene 1555 1887 . + . ID=gene-L2557_RS10595;Name=L2557_RS10595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10595 NZ_JAIKUA010000157.1 Protein Homology CDS 1555 1887 . + 0 ID=cds-WP_235410033.1;Parent=gene-L2557_RS10595;Dbxref=GenBank:WP_235410033.1;Name=WP_235410033.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015059047.1;locus_tag=L2557_RS10595;product=SMR family transporter;protein_id=WP_235410033.1;transl_table=11 NZ_JAIKUA010000157.1 RefSeq gene 1921 2229 . + . ID=gene-L2557_RS10600;Name=L2557_RS10600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10600 NZ_JAIKUA010000157.1 Protein Homology CDS 1921 2229 . + 0 ID=cds-WP_075673887.1;Parent=gene-L2557_RS10600;Dbxref=GenBank:WP_075673887.1;Name=WP_075673887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248246.1;locus_tag=L2557_RS10600;product=putative hemolysin;protein_id=WP_075673887.1;transl_table=11 NZ_JAIKUA010000157.1 RefSeq gene 2315 2839 . - . ID=gene-L2557_RS10605;Name=dsbB;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=L2557_RS10605 NZ_JAIKUA010000157.1 Protein Homology CDS 2315 2839 . - 0 ID=cds-WP_075673886.1;Parent=gene-L2557_RS10605;Dbxref=GenBank:WP_075673886.1;Name=WP_075673886.1;Ontology_term=GO:0006457,GO:0015035,GO:0016020;gbkey=CDS;gene=dsbB;go_component=membrane|0016020||IEA;go_function=protein-disulfide reductase activity|0015035||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248244.1;locus_tag=L2557_RS10605;product=disulfide bond formation protein DsbB;protein_id=WP_075673886.1;transl_table=11 NZ_JAIKUA010000157.1 RefSeq gene 3018 4562 . - . ID=gene-L2557_RS10610;Name=nhaB;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=L2557_RS10610 NZ_JAIKUA010000157.1 Protein Homology CDS 3018 4562 . - 0 ID=cds-WP_075673885.1;Parent=gene-L2557_RS10610;Dbxref=GenBank:WP_075673885.1;Name=WP_075673885.1;Ontology_term=GO:0006814,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaB;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628054.1;locus_tag=L2557_RS10610;product=sodium/proton antiporter NhaB;protein_id=WP_075673885.1;transl_table=11 NZ_JAIKUA010000157.1 RefSeq gene 4796 5515 . + . ID=gene-L2557_RS10615;Name=fadR;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=L2557_RS10615 NZ_JAIKUA010000157.1 Protein Homology CDS 4796 5515 . + 0 ID=cds-WP_072064116.1;Parent=gene-L2557_RS10615;Dbxref=GenBank:WP_072064116.1;Name=WP_072064116.1;Ontology_term=GO:0006355,GO:0019217,GO:0000062,GO:0003677,GO:0003700;gbkey=CDS;gene=fadR;go_function=fatty-acyl-CoA binding|0000062||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,regulation of fatty acid metabolic process|0019217||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243274.1;locus_tag=L2557_RS10615;product=fatty acid metabolism transcriptional regulator FadR;protein_id=WP_072064116.1;transl_table=11 ##sequence-region NZ_JAIKUA010000158.1 1 10040 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000158.1 RefSeq region 1 10040 . + . ID=NZ_JAIKUA010000158.1:1..10040;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000158.1 RefSeq gene 192 1673 . + . ID=gene-L2557_RS10620;Name=L2557_RS10620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10620 NZ_JAIKUA010000158.1 Protein Homology CDS 192 1673 . + 0 ID=cds-WP_109419786.1;Parent=gene-L2557_RS10620;Dbxref=GenBank:WP_109419786.1;Name=WP_109419786.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244174.1;locus_tag=L2557_RS10620;product=aldehyde dehydrogenase family protein;protein_id=WP_109419786.1;transl_table=11 NZ_JAIKUA010000158.1 RefSeq gene 1850 3250 . - . ID=gene-L2557_RS10625;Name=L2557_RS10625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10625 NZ_JAIKUA010000158.1 Protein Homology CDS 1850 3250 . - 0 ID=cds-WP_075670719.1;Parent=gene-L2557_RS10625;Dbxref=GenBank:WP_075670719.1;Name=WP_075670719.1;Ontology_term=GO:0006814,GO:0006865,GO:0005283,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid:sodium symporter activity|0005283||IEA,symporter activity|0015293||IEA;go_process=sodium ion transport|0006814||IEA,amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248594.1;locus_tag=L2557_RS10625;product=alanine/glycine:cation symporter family protein;protein_id=WP_075670719.1;transl_table=11 NZ_JAIKUA010000158.1 RefSeq gene 3446 4867 . + . ID=gene-L2557_RS10630;Name=clcA;gbkey=Gene;gene=clcA;gene_biotype=protein_coding;locus_tag=L2557_RS10630 NZ_JAIKUA010000158.1 Protein Homology CDS 3446 4867 . + 0 ID=cds-WP_099659293.1;Parent=gene-L2557_RS10630;Dbxref=GenBank:WP_099659293.1;Name=WP_099659293.1;Ontology_term=GO:0006821,GO:0055085,GO:0005247,GO:0005886;gbkey=CDS;gene=clcA;go_component=plasma membrane|0005886||IEA;go_function=voltage-gated chloride channel activity|0005247||IEA;go_process=chloride transport|0006821||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533806.1;locus_tag=L2557_RS10630;product=H(+)/Cl(-) exchange transporter ClcA;protein_id=WP_099659293.1;transl_table=11 NZ_JAIKUA010000158.1 RefSeq gene 4937 5791 . - . ID=gene-L2557_RS10635;Name=tehB;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=L2557_RS10635 NZ_JAIKUA010000158.1 Protein Homology CDS 4937 5791 . - 0 ID=cds-WP_099659292.1;Parent=gene-L2557_RS10635;Dbxref=GenBank:WP_099659292.1;Name=WP_099659292.1;Ontology_term=GO:0046690,GO:0008757;gbkey=CDS;gene=tehB;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=response to tellurium ion|0046690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244180.1;locus_tag=L2557_RS10635;product=SAM-dependent methyltransferase TehB;protein_id=WP_099659292.1;transl_table=11 NZ_JAIKUA010000158.1 RefSeq gene 5870 7042 . - . ID=gene-L2557_RS10640;Name=L2557_RS10640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10640 NZ_JAIKUA010000158.1 Protein Homology CDS 5870 7042 . - 0 ID=cds-WP_075670713.1;Parent=gene-L2557_RS10640;Dbxref=GenBank:WP_075670713.1;Name=WP_075670713.1;Ontology_term=GO:0006813;gbkey=CDS;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927391.1;locus_tag=L2557_RS10640;product=NAD-binding protein;protein_id=WP_075670713.1;transl_table=11 NZ_JAIKUA010000158.1 RefSeq gene 7065 8150 . - . ID=gene-L2557_RS10645;Name=L2557_RS10645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10645 NZ_JAIKUA010000158.1 Protein Homology CDS 7065 8150 . - 0 ID=cds-WP_156733850.1;Parent=gene-L2557_RS10645;Dbxref=GenBank:WP_156733850.1;Name=WP_156733850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244182.1;locus_tag=L2557_RS10645;product=linear amide C-N hydrolase;protein_id=WP_156733850.1;transl_table=11 NZ_JAIKUA010000158.1 RefSeq gene 8382 8960 . - . ID=gene-L2557_RS10650;Name=L2557_RS10650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10650 NZ_JAIKUA010000158.1 Protein Homology CDS 8382 8960 . - 0 ID=cds-WP_099659290.1;Parent=gene-L2557_RS10650;Dbxref=GenBank:WP_099659290.1;Name=WP_099659290.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250322.1;locus_tag=L2557_RS10650;product=YceI family protein;protein_id=WP_099659290.1;transl_table=11 NZ_JAIKUA010000158.1 RefSeq gene 8994 9548 . - . ID=gene-L2557_RS10655;Name=L2557_RS10655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10655 NZ_JAIKUA010000158.1 Protein Homology CDS 8994 9548 . - 0 ID=cds-WP_099659289.1;Parent=gene-L2557_RS10655;Dbxref=GenBank:WP_099659289.1;Name=WP_099659289.1;Ontology_term=GO:0022904,GO:0009055,GO:0020037,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455855.1;locus_tag=L2557_RS10655;product=cytochrome b;protein_id=WP_099659289.1;transl_table=11 ##sequence-region NZ_JAIKUA010000159.1 1 11934 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000159.1 RefSeq region 1 11934 . + . ID=NZ_JAIKUA010000159.1:1..11934;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000159.1 RefSeq gene 80 2608 . - . ID=gene-L2557_RS10660;Name=L2557_RS10660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10660 NZ_JAIKUA010000159.1 Protein Homology CDS 80 2608 . - 0 ID=cds-WP_099659277.1;Parent=gene-L2557_RS10660;Dbxref=GenBank:WP_099659277.1;Name=WP_099659277.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001464653.1;locus_tag=L2557_RS10660;product=type VI secretion system Vgr family protein;protein_id=WP_099659277.1;transl_table=11 NZ_JAIKUA010000159.1 RefSeq gene 2605 5316 . - . ID=gene-L2557_RS10665;Name=tssH;gbkey=Gene;gene=tssH;gene_biotype=protein_coding;gene_synonym=clpV;locus_tag=L2557_RS10665 NZ_JAIKUA010000159.1 Protein Homology CDS 2605 5316 . - 0 ID=cds-WP_159242454.1;Parent=gene-L2557_RS10665;Dbxref=GenBank:WP_159242454.1;Name=WP_159242454.1;Ontology_term=GO:0033103,GO:0016887,GO:0033104;gbkey=CDS;gene=tssH;go_component=type VI protein secretion system complex|0033104||IEA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014416546.1;locus_tag=L2557_RS10665;product=type VI secretion system ATPase TssH;protein_id=WP_159242454.1;transl_table=11 NZ_JAIKUA010000159.1 RefSeq gene 5533 6024 . - . ID=gene-L2557_RS10670;Name=L2557_RS10670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10670 NZ_JAIKUA010000159.1 Protein Homology CDS 5533 6024 . - 0 ID=cds-WP_023583757.1;Parent=gene-L2557_RS10670;Dbxref=GenBank:WP_023583757.1;Name=WP_023583757.1;Ontology_term=GO:0033103;gbkey=CDS;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226602.1;locus_tag=L2557_RS10670;product=Hcp family type VI secretion system effector;protein_id=WP_023583757.1;transl_table=11 NZ_JAIKUA010000159.1 RefSeq gene 6047 7765 . - . ID=gene-L2557_RS10675;Name=L2557_RS10675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10675 NZ_JAIKUA010000159.1 Protein Homology CDS 6047 7765 . - 0 ID=cds-WP_235410034.1;Parent=gene-L2557_RS10675;Dbxref=GenBank:WP_235410034.1;Name=WP_235410034.1;Ontology_term=GO:0015288,GO:0042834,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA,peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815471.1;locus_tag=L2557_RS10675;product=OmpA family protein;protein_id=WP_235410034.1;transl_table=11 NZ_JAIKUA010000159.1 RefSeq gene 7765 8433 . - . ID=gene-L2557_RS10680;Name=tssL;gbkey=Gene;gene=tssL;gene_biotype=protein_coding;locus_tag=L2557_RS10680 NZ_JAIKUA010000159.1 Protein Homology CDS 7765 8433 . - 0 ID=cds-WP_099659280.1;Parent=gene-L2557_RS10680;Dbxref=GenBank:WP_099659280.1;Name=WP_099659280.1;gbkey=CDS;gene=tssL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533865.1;locus_tag=L2557_RS10680;product=type VI secretion system protein TssL%2C short form;protein_id=WP_099659280.1;transl_table=11 NZ_JAIKUA010000159.1 RefSeq gene 8430 9767 . - . ID=gene-L2557_RS10685;Name=tssK;gbkey=Gene;gene=tssK;gene_biotype=protein_coding;locus_tag=L2557_RS10685 NZ_JAIKUA010000159.1 Protein Homology CDS 8430 9767 . - 0 ID=cds-WP_075674251.1;Parent=gene-L2557_RS10685;Dbxref=GenBank:WP_075674251.1;Name=WP_075674251.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssK;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004899025.1;locus_tag=L2557_RS10685;product=type VI secretion system baseplate subunit TssK;protein_id=WP_075674251.1;transl_table=11 NZ_JAIKUA010000159.1 RefSeq gene 9780 11327 . - . ID=gene-L2557_RS10690;Name=tssC;gbkey=Gene;gene=tssC;gene_biotype=protein_coding;locus_tag=L2557_RS10690 NZ_JAIKUA010000159.1 Protein Homology CDS 9780 11327 . - 0 ID=cds-WP_099659281.1;Parent=gene-L2557_RS10690;Dbxref=GenBank:WP_099659281.1;Name=WP_099659281.1;Ontology_term=GO:0033103,GO:0033104;gbkey=CDS;gene=tssC;go_component=type VI protein secretion system complex|0033104||IEA;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178108.1;locus_tag=L2557_RS10690;product=type VI secretion system contractile sheath large subunit;protein_id=WP_099659281.1;transl_table=11 NZ_JAIKUA010000159.1 RefSeq gene 11351 11848 . - . ID=gene-L2557_RS10695;Name=tssB;gbkey=Gene;gene=tssB;gene_biotype=protein_coding;locus_tag=L2557_RS10695 NZ_JAIKUA010000159.1 Protein Homology CDS 11351 11848 . - 0 ID=cds-WP_235410035.1;Parent=gene-L2557_RS10695;Dbxref=GenBank:WP_235410035.1;Name=WP_235410035.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssB;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660414.1;locus_tag=L2557_RS10695;product=type VI secretion system contractile sheath small subunit;protein_id=WP_235410035.1;transl_table=11 ##sequence-region NZ_JAIKUA010000016.1 1 5040 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000016.1 RefSeq region 1 5040 . + . ID=NZ_JAIKUA010000016.1:1..5040;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000016.1 RefSeq gene 206 619 . - . ID=gene-L2557_RS01640;Name=menI;gbkey=Gene;gene=menI;gene_biotype=protein_coding;locus_tag=L2557_RS01640 NZ_JAIKUA010000016.1 Protein Homology CDS 206 619 . - 0 ID=cds-WP_075673219.1;Parent=gene-L2557_RS01640;Dbxref=GenBank:WP_075673219.1;Name=WP_075673219.1;gbkey=CDS;gene=menI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537067.1;locus_tag=L2557_RS01640;product=1%2C4-dihydroxy-2-naphthoyl-CoA hydrolase;protein_id=WP_075673219.1;transl_table=11 NZ_JAIKUA010000016.1 RefSeq gene 616 3672 . - . ID=gene-L2557_RS01645;Name=ydiJ;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=L2557_RS01645 NZ_JAIKUA010000016.1 Protein Homology CDS 616 3672 . - 0 ID=cds-WP_099659669.1;Parent=gene-L2557_RS01645;Dbxref=GenBank:WP_099659669.1;Name=WP_099659669.1;Ontology_term=GO:1903457,GO:0008720,GO:0046872;gbkey=CDS;gene=ydiJ;go_function=D-lactate dehydrogenase (NAD+) activity|0008720||IEA,metal ion binding|0046872||IEA;go_process=lactate catabolic process|1903457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011146848.1;locus_tag=L2557_RS01645;product=D-2-hydroxyglutarate dehydrogenase YdiJ;protein_id=WP_099659669.1;transl_table=11 NZ_JAIKUA010000016.1 RefSeq gene 3889 5001 . + . ID=gene-L2557_RS01650;Name=ydiK;gbkey=Gene;gene=ydiK;gene_biotype=protein_coding;locus_tag=L2557_RS01650 NZ_JAIKUA010000016.1 Protein Homology CDS 3889 5001 . + 0 ID=cds-WP_075673217.1;Parent=gene-L2557_RS01650;Dbxref=GenBank:WP_075673217.1;Name=WP_075673217.1;gbkey=CDS;gene=ydiK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537070.1;locus_tag=L2557_RS01650;product=AI-2E family transporter YdiK;protein_id=WP_075673217.1;transl_table=11 ##sequence-region NZ_JAIKUA010000160.1 1 24971 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000160.1 RefSeq region 1 24971 . + . ID=NZ_JAIKUA010000160.1:1..24971;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000160.1 RefSeq gene 375 1013 . + . ID=gene-L2557_RS10700;Name=L2557_RS10700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10700 NZ_JAIKUA010000160.1 Protein Homology CDS 375 1013 . + 0 ID=cds-WP_075672660.1;Parent=gene-L2557_RS10700;Dbxref=GenBank:WP_075672660.1;Name=WP_075672660.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015731191.1;locus_tag=L2557_RS10700;product=vWA domain-containing protein;protein_id=WP_075672660.1;transl_table=11 NZ_JAIKUA010000160.1 RefSeq gene 1031 1672 . + . ID=gene-L2557_RS10705;Name=L2557_RS10705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10705 NZ_JAIKUA010000160.1 Protein Homology CDS 1031 1672 . + 0 ID=cds-WP_075672661.1;Parent=gene-L2557_RS10705;Dbxref=GenBank:WP_075672661.1;Name=WP_075672661.1;Ontology_term=GO:0050896;gbkey=CDS;go_process=response to stimulus|0050896||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000116682.1;locus_tag=L2557_RS10705;product=TerD family protein;protein_id=WP_075672661.1;transl_table=11 NZ_JAIKUA010000160.1 RefSeq gene 1672 2310 . + . ID=gene-L2557_RS10710;Name=L2557_RS10710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10710 NZ_JAIKUA010000160.1 Protein Homology CDS 1672 2310 . + 0 ID=cds-WP_075672662.1;Parent=gene-L2557_RS10710;Dbxref=GenBank:WP_075672662.1;Name=WP_075672662.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013087240.1;locus_tag=L2557_RS10710;product=vWA domain-containing protein;protein_id=WP_075672662.1;transl_table=11 NZ_JAIKUA010000160.1 RefSeq gene 2416 3456 . + . ID=gene-L2557_RS10715;Name=L2557_RS10715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10715 NZ_JAIKUA010000160.1 Protein Homology CDS 2416 3456 . + 0 ID=cds-WP_075672663.1;Parent=gene-L2557_RS10715;Dbxref=GenBank:WP_075672663.1;Name=WP_075672663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001253653.1;locus_tag=L2557_RS10715;product=TerY-C metal binding domain-containing protein;protein_id=WP_075672663.1;transl_table=11 NZ_JAIKUA010000160.1 RefSeq gene 3456 4952 . + . ID=gene-L2557_RS10720;Name=L2557_RS10720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10720 NZ_JAIKUA010000160.1 Protein Homology CDS 3456 4952 . + 0 ID=cds-WP_231039560.1;Parent=gene-L2557_RS10720;Dbxref=GenBank:WP_231039560.1;Name=WP_231039560.1;Ontology_term=GO:0004722;gbkey=CDS;go_function=protein serine/threonine phosphatase activity|0004722||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926841.1;locus_tag=L2557_RS10720;product=PP2C family serine/threonine-protein phosphatase;protein_id=WP_231039560.1;transl_table=11 NZ_JAIKUA010000160.1 RefSeq gene 4980 6479 . + . ID=gene-L2557_RS10725;Name=L2557_RS10725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10725 NZ_JAIKUA010000160.1 Protein Homology CDS 4980 6479 . + 0 ID=cds-WP_235410036.1;Parent=gene-L2557_RS10725;Dbxref=GenBank:WP_235410036.1;Name=WP_235410036.1;Ontology_term=GO:0006468,GO:0004672,GO:0005524;gbkey=CDS;go_function=protein kinase activity|0004672||IEA,ATP binding|0005524||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303502.1;locus_tag=L2557_RS10725;product=helix-hairpin-helix domain-containing protein;protein_id=WP_235410036.1;transl_table=11 NZ_JAIKUA010000160.1 RefSeq gene 6544 6981 . - . ID=gene-L2557_RS10730;Name=L2557_RS10730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10730 NZ_JAIKUA010000160.1 Protein Homology CDS 6544 6981 . - 0 ID=cds-WP_075672666.1;Parent=gene-L2557_RS10730;Dbxref=GenBank:WP_075672666.1;Name=WP_075672666.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: protein motif:HMM:TIGR01352.1;locus_tag=L2557_RS10730;product=TonB family protein;protein_id=WP_075672666.1;transl_table=11 NZ_JAIKUA010000160.1 RefSeq gene 7239 8207 . + . ID=gene-L2557_RS10735;Name=aes;gbkey=Gene;gene=aes;gene_biotype=protein_coding;locus_tag=L2557_RS10735 NZ_JAIKUA010000160.1 Protein Homology CDS 7239 8207 . + 0 ID=cds-WP_075672667.1;Parent=gene-L2557_RS10735;Dbxref=GenBank:WP_075672667.1;Name=WP_075672667.1;Ontology_term=GO:0016787;gbkey=CDS;gene=aes;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005289219.1;locus_tag=L2557_RS10735;product=acetyl esterase;protein_id=WP_075672667.1;transl_table=11 NZ_JAIKUA010000160.1 RefSeq gene 8220 8933 . - . ID=gene-L2557_RS10740;Name=L2557_RS10740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10740 NZ_JAIKUA010000160.1 Protein Homology CDS 8220 8933 . - 0 ID=cds-WP_075672716.1;Parent=gene-L2557_RS10740;Dbxref=GenBank:WP_075672716.1;Name=WP_075672716.1;Ontology_term=GO:0016818,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536068.1;locus_tag=L2557_RS10740;product=NUDIX hydrolase;protein_id=WP_075672716.1;transl_table=11 NZ_JAIKUA010000160.1 RefSeq gene 9087 10106 . + . ID=gene-L2557_RS10745;Name=L2557_RS10745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10745 NZ_JAIKUA010000160.1 Protein Homology CDS 9087 10106 . + 0 ID=cds-WP_075672668.1;Parent=gene-L2557_RS10745;Dbxref=GenBank:WP_075672668.1;Name=WP_075672668.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662325.1;locus_tag=L2557_RS10745;product=SPFH domain-containing protein;protein_id=WP_075672668.1;transl_table=11 NZ_JAIKUA010000160.1 RefSeq gene 10106 11050 . + . ID=gene-L2557_RS10750;Name=L2557_RS10750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10750 NZ_JAIKUA010000160.1 Protein Homology CDS 10106 11050 . + 0 ID=cds-WP_075672669.1;Parent=gene-L2557_RS10750;Dbxref=GenBank:WP_075672669.1;Name=WP_075672669.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245619.1;locus_tag=L2557_RS10750;product=diacylglycerol kinase catalytic domain-containing protein;protein_id=WP_075672669.1;transl_table=11 NZ_JAIKUA010000160.1 RefSeq gene 11053 11676 . - . ID=gene-L2557_RS10755;Name=tetR(H);gbkey=Gene;gene=tetR(H);gene_biotype=protein_coding;locus_tag=L2557_RS10755 NZ_JAIKUA010000160.1 Protein Homology CDS 11053 11676 . - 0 ID=cds-WP_235410037.1;Parent=gene-L2557_RS10755;Dbxref=GenBank:WP_235410037.1;Name=WP_235410037.1;gbkey=CDS;gene=tetR(H);inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248868.1;locus_tag=L2557_RS10755;product=tetracycline resistance transcriptional repressor TetR(H);protein_id=WP_235410037.1;transl_table=11 NZ_JAIKUA010000160.1 RefSeq gene 11769 12971 . + . ID=gene-L2557_RS10760;Name=tet(H);gbkey=Gene;gene=tet(H);gene_biotype=protein_coding;locus_tag=L2557_RS10760 NZ_JAIKUA010000160.1 Protein Homology CDS 11769 12971 . + 0 ID=cds-WP_143484145.1;Parent=gene-L2557_RS10760;Dbxref=GenBank:WP_143484145.1;Name=WP_143484145.1;Ontology_term=GO:0015904,GO:0008493;gbkey=CDS;gene=tet(H);go_function=tetracycline transmembrane transporter activity|0008493||IEA;go_process=tetracycline transmembrane transport|0015904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006248867.1;locus_tag=L2557_RS10760;product=tetracycline efflux MFS transporter Tet(H);protein_id=WP_143484145.1;transl_table=11 NZ_JAIKUA010000160.1 RefSeq gene 13457 13654 . - . ID=gene-L2557_RS10765;Name=L2557_RS10765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10765 NZ_JAIKUA010000160.1 GeneMarkS-2+ CDS 13457 13654 . - 0 ID=cds-WP_098941920.1;Parent=gene-L2557_RS10765;Dbxref=GenBank:WP_098941920.1;Name=WP_098941920.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS10765;product=hypothetical protein;protein_id=WP_098941920.1;transl_table=11 NZ_JAIKUA010000160.1 RefSeq gene 13729 14031 . - . ID=gene-L2557_RS10770;Name=L2557_RS10770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10770 NZ_JAIKUA010000160.1 Protein Homology CDS 13729 14031 . - 0 ID=cds-WP_075672673.1;Parent=gene-L2557_RS10770;Dbxref=GenBank:WP_075672673.1;Name=WP_075672673.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013316567.1;locus_tag=L2557_RS10770;product=phage holin family protein;protein_id=WP_075672673.1;transl_table=11 NZ_JAIKUA010000160.1 RefSeq gene 14607 14867 . + . ID=gene-L2557_RS10775;Name=L2557_RS10775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10775 NZ_JAIKUA010000160.1 Protein Homology CDS 14607 14867 . + 0 ID=cds-WP_075672674.1;Parent=gene-L2557_RS10775;Dbxref=GenBank:WP_075672674.1;Name=WP_075672674.1;Ontology_term=GO:0006355,GO:0003677,GO:0008270;gbkey=CDS;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536077.1;locus_tag=L2557_RS10775;product=Ogr/Delta-like zinc finger protein;protein_id=WP_075672674.1;transl_table=11 NZ_JAIKUA010000160.1 RefSeq gene 15138 16202 . + . ID=gene-L2557_RS10780;Name=dhaK;gbkey=Gene;gene=dhaK;gene_biotype=protein_coding;locus_tag=L2557_RS10780 NZ_JAIKUA010000160.1 Protein Homology CDS 15138 16202 . + 0 ID=cds-WP_075672675.1;Parent=gene-L2557_RS10780;Dbxref=GenBank:WP_075672675.1;Name=WP_075672675.1;Ontology_term=GO:0006071,GO:0004371;gbkey=CDS;gene=dhaK;go_function=glycerone kinase activity|0004371||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245625.1;locus_tag=L2557_RS10780;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_075672675.1;transl_table=11 NZ_JAIKUA010000160.1 RefSeq gene 16233 16865 . + . ID=gene-L2557_RS10785;Name=dhaL;gbkey=Gene;gene=dhaL;gene_biotype=protein_coding;locus_tag=L2557_RS10785 NZ_JAIKUA010000160.1 Protein Homology CDS 16233 16865 . + 0 ID=cds-WP_075672676.1;Parent=gene-L2557_RS10785;Dbxref=GenBank:WP_075672676.1;Name=WP_075672676.1;Ontology_term=GO:0006071,GO:0047324;gbkey=CDS;gene=dhaL;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=glycerol metabolic process|0006071||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249430.1;locus_tag=L2557_RS10785;product=dihydroxyacetone kinase subunit DhaL;protein_id=WP_075672676.1;transl_table=11 NZ_JAIKUA010000160.1 RefSeq gene 16907 18355 . + . ID=gene-L2557_RS10790;Name=dhaM;gbkey=Gene;gene=dhaM;gene_biotype=protein_coding;locus_tag=L2557_RS10790 NZ_JAIKUA010000160.1 Protein Homology CDS 16907 18355 . + 0 ID=cds-WP_075672677.1;Parent=gene-L2557_RS10790;Dbxref=GenBank:WP_075672677.1;Name=WP_075672677.1;Ontology_term=GO:0009401,GO:0016310,GO:0019563,GO:0047324,GO:0016020;gbkey=CDS;gene=dhaM;go_component=membrane|0016020||IEA;go_function=phosphoenolpyruvate-glycerone phosphotransferase activity|0047324||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA,glycerol catabolic process|0019563||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249429.1;locus_tag=L2557_RS10790;product=dihydroxyacetone kinase phosphoryl donor subunit DhaM;protein_id=WP_075672677.1;transl_table=11 NZ_JAIKUA010000160.1 RefSeq gene 18459 19310 . - . ID=gene-L2557_RS10795;Name=L2557_RS10795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10795 NZ_JAIKUA010000160.1 Protein Homology CDS 18459 19310 . - 0 ID=cds-WP_083629086.1;Parent=gene-L2557_RS10795;Dbxref=GenBank:WP_083629086.1;Name=WP_083629086.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049211.1;locus_tag=L2557_RS10795;product=MrpH family fimbial adhesin;protein_id=WP_083629086.1;transl_table=11 NZ_JAIKUA010000160.1 RefSeq gene 19317 19853 . - . ID=gene-L2557_RS10800;Name=L2557_RS10800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10800 NZ_JAIKUA010000160.1 Protein Homology CDS 19317 19853 . - 0 ID=cds-WP_075672679.1;Parent=gene-L2557_RS10800;Dbxref=GenBank:WP_075672679.1;Name=WP_075672679.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF012635.6;locus_tag=L2557_RS10800;product=fimbrial protein;protein_id=WP_075672679.1;transl_table=11 NZ_JAIKUA010000160.1 RefSeq gene 19853 20344 . - . ID=gene-L2557_RS10805;Name=L2557_RS10805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10805 NZ_JAIKUA010000160.1 Protein Homology CDS 19853 20344 . - 0 ID=cds-WP_075672680.1;Parent=gene-L2557_RS10805;Dbxref=GenBank:WP_075672680.1;Name=WP_075672680.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658571.1;locus_tag=L2557_RS10805;product=fimbrial protein;protein_id=WP_075672680.1;transl_table=11 NZ_JAIKUA010000160.1 RefSeq gene 20361 20846 . - . ID=gene-L2557_RS10810;Name=L2557_RS10810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10810 NZ_JAIKUA010000160.1 Protein Homology CDS 20361 20846 . - 0 ID=cds-WP_075672681.1;Parent=gene-L2557_RS10810;Dbxref=GenBank:WP_075672681.1;Name=WP_075672681.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF012635.6;locus_tag=L2557_RS10810;product=fimbrial protein;protein_id=WP_075672681.1;transl_table=11 NZ_JAIKUA010000160.1 RefSeq gene 20851 21597 . - . ID=gene-L2557_RS10815;Name=L2557_RS10815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10815 NZ_JAIKUA010000160.1 Protein Homology CDS 20851 21597 . - 0 ID=cds-WP_075672682.1;Parent=gene-L2557_RS10815;Dbxref=GenBank:WP_075672682.1;Name=WP_075672682.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814937.1;locus_tag=L2557_RS10815;product=fimbrial biogenesis chaperone;protein_id=WP_075672682.1;transl_table=11 NZ_JAIKUA010000160.1 RefSeq gene 21624 24119 . - . ID=gene-L2557_RS10820;Name=L2557_RS10820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10820 NZ_JAIKUA010000160.1 Protein Homology CDS 21624 24119 . - 0 ID=cds-WP_075672683.1;Parent=gene-L2557_RS10820;Dbxref=GenBank:WP_075672683.1;Name=WP_075672683.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663379.1;locus_tag=L2557_RS10820;product=fimbria/pilus outer membrane usher protein;protein_id=WP_075672683.1;transl_table=11 NZ_JAIKUA010000160.1 RefSeq gene 24213 24779 . - . ID=gene-L2557_RS10825;Name=L2557_RS10825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10825 NZ_JAIKUA010000160.1 Protein Homology CDS 24213 24779 . - 0 ID=cds-WP_075672684.1;Parent=gene-L2557_RS10825;Dbxref=GenBank:WP_075672684.1;Name=WP_075672684.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658575.1;locus_tag=L2557_RS10825;product=fimbrial protein;protein_id=WP_075672684.1;transl_table=11 ##sequence-region NZ_JAIKUA010000161.1 1 23489 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000161.1 RefSeq region 1 23489 . + . ID=NZ_JAIKUA010000161.1:1..23489;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000161.1 RefSeq gene 337 924 . - . ID=gene-L2557_RS10830;Name=L2557_RS10830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10830 NZ_JAIKUA010000161.1 Protein Homology CDS 337 924 . - 0 ID=cds-WP_159241722.1;Parent=gene-L2557_RS10830;Dbxref=GenBank:WP_159241722.1;Name=WP_159241722.1;Ontology_term=GO:0006633,GO:0008770;gbkey=CDS;go_function=[acyl-carrier-protein] phosphodiesterase activity|0008770||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252588.1;locus_tag=L2557_RS10830;product=acyl carrier protein phosphodiesterase;protein_id=WP_159241722.1;transl_table=11 NZ_JAIKUA010000161.1 RefSeq gene 1032 2105 . + . ID=gene-L2557_RS10835;Name=queA;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=L2557_RS10835 NZ_JAIKUA010000161.1 Protein Homology CDS 1032 2105 . + 0 ID=cds-WP_235410038.1;Parent=gene-L2557_RS10835;Dbxref=GenBank:WP_235410038.1;Name=WP_235410038.1;Ontology_term=GO:0006400,GO:0008616,GO:0051075,GO:0005737;gbkey=CDS;gene=queA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity|0051075||IEA;go_process=tRNA modification|0006400||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252586.1;locus_tag=L2557_RS10835;product=tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA;protein_id=WP_235410038.1;transl_table=11 NZ_JAIKUA010000161.1 RefSeq gene 2289 3431 . + . ID=gene-L2557_RS10840;Name=tgt;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=L2557_RS10840 NZ_JAIKUA010000161.1 Protein Homology CDS 2289 3431 . + 0 ID=cds-WP_036911729.1;Parent=gene-L2557_RS10840;Dbxref=GenBank:WP_036911729.1;Name=WP_036911729.1;Ontology_term=GO:0006400,GO:0008479,GO:0005737;gbkey=CDS;gene=tgt;go_component=cytoplasm|0005737||IEA;go_function=tRNA-guanosine(34) queuine transglycosylase activity|0008479||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245143.1;locus_tag=L2557_RS10840;product=tRNA guanosine(34) transglycosylase Tgt;protein_id=WP_036911729.1;transl_table=11 NZ_JAIKUA010000161.1 RefSeq gene 3517 3852 . + . ID=gene-L2557_RS10845;Name=yajC;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=L2557_RS10845 NZ_JAIKUA010000161.1 Protein Homology CDS 3517 3852 . + 0 ID=cds-WP_006535133.1;Parent=gene-L2557_RS10845;Dbxref=GenBank:WP_006535133.1;Name=WP_006535133.1;Ontology_term=GO:0009306,GO:0015450,GO:0005886;gbkey=CDS;gene=yajC;go_component=plasma membrane|0005886||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000007628.1;locus_tag=L2557_RS10845;product=preprotein translocase subunit YajC;protein_id=WP_006535133.1;transl_table=11 NZ_JAIKUA010000161.1 RefSeq gene 3885 5732 . + . ID=gene-L2557_RS10850;Name=secD;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=L2557_RS10850 NZ_JAIKUA010000161.1 Protein Homology CDS 3885 5732 . + 0 ID=cds-WP_075672033.1;Parent=gene-L2557_RS10850;Dbxref=GenBank:WP_075672033.1;Name=WP_075672033.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secD;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005125127.1;locus_tag=L2557_RS10850;product=protein translocase subunit SecD;protein_id=WP_075672033.1;transl_table=11 NZ_JAIKUA010000161.1 RefSeq gene 5743 6711 . + . ID=gene-L2557_RS10855;Name=secF;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=L2557_RS10855 NZ_JAIKUA010000161.1 Protein Homology CDS 5743 6711 . + 0 ID=cds-WP_075672031.1;Parent=gene-L2557_RS10855;Dbxref=GenBank:WP_075672031.1;Name=WP_075672031.1;Ontology_term=GO:0006886,GO:0043952,GO:0015450,GO:0031522;gbkey=CDS;gene=secF;go_component=cell envelope Sec protein transport complex|0031522||IEA;go_function=protein-transporting ATPase activity|0015450||IEA;go_process=intracellular protein transport|0006886||IEA,protein transport by the Sec complex|0043952||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656778.1;locus_tag=L2557_RS10855;product=protein translocase subunit SecF;protein_id=WP_075672031.1;transl_table=11 NZ_JAIKUA010000161.1 RefSeq gene 6828 7277 . + . ID=gene-L2557_RS10860;Name=nrdR;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=L2557_RS10860 NZ_JAIKUA010000161.1 Protein Homology CDS 6828 7277 . + 0 ID=cds-WP_006535128.1;Parent=gene-L2557_RS10860;Dbxref=GenBank:WP_006535128.1;Name=WP_006535128.1;Ontology_term=GO:0006355,GO:0008270,GO:0140110;gbkey=CDS;gene=nrdR;go_function=zinc ion binding|0008270||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017458860.1;locus_tag=L2557_RS10860;product=transcriptional regulator NrdR;protein_id=WP_006535128.1;transl_table=11 NZ_JAIKUA010000161.1 RefSeq gene 7348 8502 . + . ID=gene-L2557_RS10865;Name=ribD;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=L2557_RS10865 NZ_JAIKUA010000161.1 Protein Homology CDS 7348 8502 . + 0 ID=cds-WP_223673854.1;Parent=gene-L2557_RS10865;Dbxref=GenBank:WP_223673854.1;Name=WP_223673854.1;Ontology_term=GO:0008270,GO:0008703,GO:0008835,GO:0050661;gbkey=CDS;gene=ribD;go_function=zinc ion binding|0008270||IEA,5-amino-6-(5-phosphoribosylamino)uracil reductase activity|0008703||IEA,diaminohydroxyphosphoribosylaminopyrimidine deaminase activity|0008835||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535127.1;locus_tag=L2557_RS10865;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD;protein_id=WP_223673854.1;transl_table=11 NZ_JAIKUA010000161.1 RefSeq gene 8715 9185 . + . ID=gene-L2557_RS10870;Name=ribH;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=L2557_RS10870 NZ_JAIKUA010000161.1 Protein Homology CDS 8715 9185 . + 0 ID=cds-WP_023580887.1;Parent=gene-L2557_RS10870;Dbxref=GenBank:WP_023580887.1;Name=WP_023580887.1;Ontology_term=GO:0000906,GO:0009349;gbkey=CDS;gene=ribH;go_component=riboflavin synthase complex|0009349||IEA;go_function=6%2C7-dimethyl-8-ribityllumazine synthase activity|0000906||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005182120.1;locus_tag=L2557_RS10870;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=WP_023580887.1;transl_table=11 NZ_JAIKUA010000161.1 RefSeq gene 9214 9627 . + . ID=gene-L2557_RS10875;Name=nusB;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=L2557_RS10875 NZ_JAIKUA010000161.1 Protein Homology CDS 9214 9627 . + 0 ID=cds-WP_006535124.1;Parent=gene-L2557_RS10875;Dbxref=GenBank:WP_006535124.1;Name=WP_006535124.1;Ontology_term=GO:0006353;gbkey=CDS;gene=nusB;go_process=DNA-templated transcription termination|0006353||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245136.1;locus_tag=L2557_RS10875;product=transcription antitermination factor NusB;protein_id=WP_006535124.1;transl_table=11 NZ_JAIKUA010000161.1 RefSeq gene 9727 10710 . + . ID=gene-L2557_RS10880;Name=thiL;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=L2557_RS10880 NZ_JAIKUA010000161.1 Protein Homology CDS 9727 10710 . + 0 ID=cds-WP_099659975.1;Parent=gene-L2557_RS10880;Dbxref=GenBank:WP_099659975.1;Name=WP_099659975.1;Ontology_term=GO:0009228,GO:0009030;gbkey=CDS;gene=thiL;go_function=thiamine-phosphate kinase activity|0009030||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535123.1;locus_tag=L2557_RS10880;product=thiamine-phosphate kinase;protein_id=WP_099659975.1;transl_table=11 NZ_JAIKUA010000161.1 RefSeq gene 10806 11141 . - . ID=gene-L2557_RS10885;Name=L2557_RS10885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10885 NZ_JAIKUA010000161.1 Protein Homology CDS 10806 11141 . - 0 ID=cds-WP_075672025.1;Parent=gene-L2557_RS10885;Dbxref=GenBank:WP_075672025.1;Name=WP_075672025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313117.1;locus_tag=L2557_RS10885;product=zinc ribbon domain-containing protein YjdM;protein_id=WP_075672025.1;transl_table=11 NZ_JAIKUA010000161.1 RefSeq gene 11525 12535 . - . ID=gene-L2557_RS10890;Name=rbsR;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=L2557_RS10890 NZ_JAIKUA010000161.1 Protein Homology CDS 11525 12535 . - 0 ID=cds-WP_171455263.1;Parent=gene-L2557_RS10890;Dbxref=GenBank:WP_171455263.1;Name=WP_171455263.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=rbsR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011144472.1;locus_tag=L2557_RS10890;product=ribose operon transcriptional repressor RbsR;protein_id=WP_171455263.1;transl_table=11 NZ_JAIKUA010000161.1 RefSeq gene 12540 13466 . - . ID=gene-L2557_RS10895;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=L2557_RS10895 NZ_JAIKUA010000161.1 Protein Homology CDS 12540 13466 . - 0 ID=cds-WP_075672021.1;Parent=gene-L2557_RS10895;Dbxref=GenBank:WP_075672021.1;Name=WP_075672021.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535119.1;locus_tag=L2557_RS10895;product=ribokinase;protein_id=WP_075672021.1;transl_table=11 NZ_JAIKUA010000161.1 RefSeq gene 13544 14434 . - . ID=gene-L2557_RS10900;Name=rbsB;gbkey=Gene;gene=rbsB;gene_biotype=protein_coding;locus_tag=L2557_RS10900 NZ_JAIKUA010000161.1 Protein Homology CDS 13544 14434 . - 0 ID=cds-WP_075672019.1;Parent=gene-L2557_RS10900;Dbxref=GenBank:WP_075672019.1;Name=WP_075672019.1;gbkey=CDS;gene=rbsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013648977.1;locus_tag=L2557_RS10900;product=ribose ABC transporter substrate-binding protein RbsB;protein_id=WP_075672019.1;transl_table=11 NZ_JAIKUA010000161.1 RefSeq gene 14477 15442 . - . ID=gene-L2557_RS10905;Name=rbsC;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=L2557_RS10905 NZ_JAIKUA010000161.1 Protein Homology CDS 14477 15442 . - 0 ID=cds-WP_075672017.1;Parent=gene-L2557_RS10905;Dbxref=GenBank:WP_075672017.1;Name=WP_075672017.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=rbsC;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245124.1;locus_tag=L2557_RS10905;product=ribose ABC transporter permease;protein_id=WP_075672017.1;transl_table=11 NZ_JAIKUA010000161.1 RefSeq gene 15444 16952 . - . ID=gene-L2557_RS10910;Name=rbsA;gbkey=Gene;gene=rbsA;gene_biotype=protein_coding;locus_tag=L2557_RS10910 NZ_JAIKUA010000161.1 Protein Homology CDS 15444 16952 . - 0 ID=cds-WP_099659974.1;Parent=gene-L2557_RS10910;Dbxref=GenBank:WP_099659974.1;Name=WP_099659974.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rbsA;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367472.1;locus_tag=L2557_RS10910;product=ribose ABC transporter ATP-binding protein RbsA;protein_id=WP_099659974.1;transl_table=11 NZ_JAIKUA010000161.1 RefSeq gene 16960 17379 . - . ID=gene-L2557_RS10915;Name=rbsD;gbkey=Gene;gene=rbsD;gene_biotype=protein_coding;locus_tag=L2557_RS10915 NZ_JAIKUA010000161.1 Protein Homology CDS 16960 17379 . - 0 ID=cds-WP_156733043.1;Parent=gene-L2557_RS10915;Dbxref=GenBank:WP_156733043.1;Name=WP_156733043.1;Ontology_term=GO:0016872;gbkey=CDS;gene=rbsD;go_function=intramolecular lyase activity|0016872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252570.1;locus_tag=L2557_RS10915;product=D-ribose pyranase;protein_id=WP_156733043.1;transl_table=11 NZ_JAIKUA010000161.1 RefSeq gene 17730 19595 . - . ID=gene-L2557_RS10920;Name=dxs;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=L2557_RS10920 NZ_JAIKUA010000161.1 Protein Homology CDS 17730 19595 . - 0 ID=cds-WP_235410039.1;Parent=gene-L2557_RS10920;Dbxref=GenBank:WP_235410039.1;Name=WP_235410039.1;Ontology_term=GO:0008615,GO:0009228,GO:0009240,GO:0008661,GO:0005737;gbkey=CDS;gene=dxs;go_component=cytoplasm|0005737||IEA;go_function=1-deoxy-D-xylulose-5-phosphate synthase activity|0008661||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA,thiamine biosynthetic process|0009228||IEA,isopentenyl diphosphate biosynthetic process|0009240||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252568.1;locus_tag=L2557_RS10920;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=WP_235410039.1;transl_table=11 NZ_JAIKUA010000161.1 RefSeq gene 19662 20585 . - . ID=gene-L2557_RS10925;Name=ispA;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=L2557_RS10925 NZ_JAIKUA010000161.1 Protein Homology CDS 19662 20585 . - 0 ID=cds-WP_235410040.1;Parent=gene-L2557_RS10925;Dbxref=GenBank:WP_235410040.1;Name=WP_235410040.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245120.1;locus_tag=L2557_RS10925;product=(2E%2C6E)-farnesyl diphosphate synthase;protein_id=WP_235410040.1;transl_table=11 NZ_JAIKUA010000161.1 RefSeq gene 20586 20849 . - . ID=gene-L2557_RS10930;Name=xseB;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=L2557_RS10930 NZ_JAIKUA010000161.1 Protein Homology CDS 20586 20849 . - 0 ID=cds-WP_023580876.1;Parent=gene-L2557_RS10930;Dbxref=GenBank:WP_023580876.1;Name=WP_023580876.1;gbkey=CDS;gene=xseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247215.1;locus_tag=L2557_RS10930;product=exodeoxyribonuclease VII small subunit;protein_id=WP_023580876.1;transl_table=11 NZ_JAIKUA010000161.1 RefSeq gene 21051 22502 . + . ID=gene-L2557_RS10935;Name=thiI;gbkey=Gene;gene=thiI;gene_biotype=protein_coding;locus_tag=L2557_RS10935 NZ_JAIKUA010000161.1 Protein Homology CDS 21051 22502 . + 0 ID=cds-WP_075672007.1;Parent=gene-L2557_RS10935;Dbxref=GenBank:WP_075672007.1;Name=WP_075672007.1;Ontology_term=GO:0006400,GO:0009228,GO:0140741;gbkey=CDS;gene=thiI;go_function=tRNA-uracil-4 sulfurtransferase activity|0140741||IEA;go_process=tRNA modification|0006400||IEA,thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245118.1;locus_tag=L2557_RS10935;product=tRNA uracil 4-sulfurtransferase ThiI;protein_id=WP_075672007.1;transl_table=11 NZ_JAIKUA010000161.1 RefSeq gene 22767 23489 . - . ID=gene-L2557_RS10940;Name=L2557_RS10940;end_range=23489,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10940;partial=true NZ_JAIKUA010000161.1 GeneMarkS-2+ CDS 22767 23489 . - 0 ID=cds-WP_235410041.1;Parent=gene-L2557_RS10940;Dbxref=GenBank:WP_235410041.1;Name=WP_235410041.1;end_range=23489,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS10940;partial=true;product=phosphoribosyltransferase;protein_id=WP_235410041.1;transl_table=11 ##sequence-region NZ_JAIKUA010000162.1 1 10803 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000162.1 RefSeq region 1 10803 . + . ID=NZ_JAIKUA010000162.1:1..10803;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000162.1 RefSeq gene 46 3243 . + . ID=gene-L2557_RS10945;Name=L2557_RS10945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10945 NZ_JAIKUA010000162.1 Protein Homology CDS 46 3243 . + 0 ID=cds-WP_412761648.1;Parent=gene-L2557_RS10945;Dbxref=GenBank:WP_412761648.1;Name=WP_412761648.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815481.1;locus_tag=L2557_RS10945;product=ImcF-related family protein;protein_id=WP_412761648.1;transl_table=11 NZ_JAIKUA010000162.1 RefSeq gene 3289 4911 . + . ID=gene-L2557_RS10950;Name=tssA;gbkey=Gene;gene=tssA;gene_biotype=protein_coding;locus_tag=L2557_RS10950 NZ_JAIKUA010000162.1 Protein Homology CDS 3289 4911 . + 0 ID=cds-WP_223674047.1;Parent=gene-L2557_RS10950;Dbxref=GenBank:WP_223674047.1;Name=WP_223674047.1;gbkey=CDS;gene=tssA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662559.1;locus_tag=L2557_RS10950;product=type VI secretion system protein TssA;protein_id=WP_223674047.1;transl_table=11 NZ_JAIKUA010000162.1 RefSeq gene 4944 6707 . + . ID=gene-L2557_RS10955;Name=tssF;gbkey=Gene;gene=tssF;gene_biotype=protein_coding;locus_tag=L2557_RS10955 NZ_JAIKUA010000162.1 Protein Homology CDS 4944 6707 . + 0 ID=cds-WP_099659270.1;Parent=gene-L2557_RS10955;Dbxref=GenBank:WP_099659270.1;Name=WP_099659270.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssF;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913071.1;locus_tag=L2557_RS10955;product=type VI secretion system baseplate subunit TssF;protein_id=WP_099659270.1;transl_table=11 NZ_JAIKUA010000162.1 RefSeq gene 6671 7768 . + . ID=gene-L2557_RS10960;Name=tssG;gbkey=Gene;gene=tssG;gene_biotype=protein_coding;locus_tag=L2557_RS10960 NZ_JAIKUA010000162.1 Protein Homology CDS 6671 7768 . + 0 ID=cds-WP_099659269.1;Parent=gene-L2557_RS10960;Dbxref=GenBank:WP_099659269.1;Name=WP_099659269.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssG;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660399.1;locus_tag=L2557_RS10960;product=type VI secretion system baseplate subunit TssG;protein_id=WP_099659269.1;transl_table=11 NZ_JAIKUA010000162.1 RefSeq gene 7749 8306 . + . ID=gene-L2557_RS10965;Name=tssJ;gbkey=Gene;gene=tssJ;gene_biotype=protein_coding;locus_tag=L2557_RS10965 NZ_JAIKUA010000162.1 Protein Homology CDS 7749 8306 . + 0 ID=cds-WP_371317008.1;Parent=gene-L2557_RS10965;Dbxref=GenBank:WP_371317008.1;Name=WP_371317008.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssJ;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533894.1;locus_tag=L2557_RS10965;product=type VI secretion system lipoprotein TssJ;protein_id=WP_371317008.1;transl_table=11 NZ_JAIKUA010000162.1 RefSeq gene 8309 8743 . + . ID=gene-L2557_RS10970;Name=tssE;gbkey=Gene;gene=tssE;gene_biotype=protein_coding;locus_tag=L2557_RS10970 NZ_JAIKUA010000162.1 Protein Homology CDS 8309 8743 . + 0 ID=cds-WP_075674113.1;Parent=gene-L2557_RS10970;Dbxref=GenBank:WP_075674113.1;Name=WP_075674113.1;Ontology_term=GO:0033103;gbkey=CDS;gene=tssE;go_process=protein secretion by the type VI secretion system|0033103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913074.1;locus_tag=L2557_RS10970;product=type VI secretion system baseplate subunit TssE;protein_id=WP_075674113.1;transl_table=11 NZ_JAIKUA010000162.1 RefSeq gene 8823 10205 . + . ID=gene-L2557_RS10975;Name=L2557_RS10975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10975 NZ_JAIKUA010000162.1 Protein Homology CDS 8823 10205 . + 0 ID=cds-WP_211838210.1;Parent=gene-L2557_RS10975;Dbxref=GenBank:WP_211838210.1;Name=WP_211838210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913075.1;locus_tag=L2557_RS10975;product=VasL domain-containing protein;protein_id=WP_211838210.1;transl_table=11 NZ_JAIKUA010000162.1 RefSeq gene 10216 10803 . + . ID=gene-L2557_RS10980;Name=L2557_RS10980;end_range=10803,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10980;partial=true NZ_JAIKUA010000162.1 GeneMarkS-2+ CDS 10216 10803 . + 0 ID=cds-WP_235410043.1;Parent=gene-L2557_RS10980;Dbxref=GenBank:WP_235410043.1;Name=WP_235410043.1;end_range=10803,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS10980;partial=true;product=hypothetical protein;protein_id=WP_235410043.1;transl_table=11 ##sequence-region NZ_JAIKUA010000163.1 1 14435 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000163.1 RefSeq region 1 14435 . + . ID=NZ_JAIKUA010000163.1:1..14435;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000163.1 RefSeq gene 1 611 . - . ID=gene-L2557_RS10985;Name=L2557_RS10985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10985;partial=true;start_range=.,1 NZ_JAIKUA010000163.1 Protein Homology CDS 1 611 . - 0 ID=cds-WP_235410044.1;Parent=gene-L2557_RS10985;Dbxref=GenBank:WP_235410044.1;Name=WP_235410044.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536642.1;locus_tag=L2557_RS10985;partial=true;product=TetR family transcriptional regulator;protein_id=WP_235410044.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000163.1 RefSeq gene 701 1615 . + . ID=gene-L2557_RS10990;Name=L2557_RS10990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10990 NZ_JAIKUA010000163.1 Protein Homology CDS 701 1615 . + 0 ID=cds-WP_235410045.1;Parent=gene-L2557_RS10990;Dbxref=GenBank:WP_235410045.1;Name=WP_235410045.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242792.1;locus_tag=L2557_RS10990;product=helix-turn-helix domain-containing protein;protein_id=WP_235410045.1;transl_table=11 NZ_JAIKUA010000163.1 RefSeq gene 1797 2729 . + . ID=gene-L2557_RS10995;Name=L2557_RS10995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS10995 NZ_JAIKUA010000163.1 Protein Homology CDS 1797 2729 . + 0 ID=cds-WP_196576197.1;Parent=gene-L2557_RS10995;Dbxref=GenBank:WP_196576197.1;Name=WP_196576197.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247995.1;locus_tag=L2557_RS10995;product=acyl-CoA thioester hydrolase/BAAT C-terminal domain-containing protein;protein_id=WP_196576197.1;transl_table=11 NZ_JAIKUA010000163.1 RefSeq gene 2707 2910 . + . ID=gene-L2557_RS11000;Name=L2557_RS11000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11000 NZ_JAIKUA010000163.1 Protein Homology CDS 2707 2910 . + 0 ID=cds-WP_191901278.1;Parent=gene-L2557_RS11000;Dbxref=GenBank:WP_191901278.1;Name=WP_191901278.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF013088.7;locus_tag=L2557_RS11000;product=EamA family transporter;protein_id=WP_191901278.1;transl_table=11 NZ_JAIKUA010000163.1 RefSeq gene 3073 3723 . + . ID=gene-L2557_RS11005;Name=fetA;gbkey=Gene;gene=fetA;gene_biotype=protein_coding;gene_synonym=ybbL;locus_tag=L2557_RS11005 NZ_JAIKUA010000163.1 Protein Homology CDS 3073 3723 . + 0 ID=cds-WP_098942675.1;Parent=gene-L2557_RS11005;Dbxref=GenBank:WP_098942675.1;Name=WP_098942675.1;Ontology_term=GO:1903988,GO:0016887;gbkey=CDS;gene=fetA;go_function=ATP hydrolysis activity|0016887||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536637.1;locus_tag=L2557_RS11005;product=iron efflux ABC transporter ATP-binding subunit FetA;protein_id=WP_098942675.1;transl_table=11 NZ_JAIKUA010000163.1 RefSeq gene 3774 4547 . + . ID=gene-L2557_RS11010;Name=fetB;gbkey=Gene;gene=fetB;gene_biotype=protein_coding;locus_tag=L2557_RS11010 NZ_JAIKUA010000163.1 Protein Homology CDS 3774 4547 . + 0 ID=cds-WP_235410046.1;Parent=gene-L2557_RS11010;Dbxref=GenBank:WP_235410046.1;Name=WP_235410046.1;Ontology_term=GO:1903988,GO:0005886;gbkey=CDS;gene=fetB;go_component=plasma membrane|0005886||IEA;go_process=iron ion export across plasma membrane|1903988||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004919013.1;locus_tag=L2557_RS11010;product=iron efflux ABC transporter permease subunit FetB;protein_id=WP_235410046.1;transl_table=11 NZ_JAIKUA010000163.1 RefSeq gene 4630 5361 . - . ID=gene-L2557_RS11015;Name=L2557_RS11015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11015 NZ_JAIKUA010000163.1 Protein Homology CDS 4630 5361 . - 0 ID=cds-WP_371317009.1;Parent=gene-L2557_RS11015;Dbxref=GenBank:WP_371317009.1;Name=WP_371317009.1;Ontology_term=GO:0003676,GO:0004519,GO:0046872;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004708952.1;locus_tag=L2557_RS11015;product=DNA/RNA non-specific endonuclease;protein_id=WP_371317009.1;transl_table=11 NZ_JAIKUA010000163.1 RefSeq gene 5886 6362 . - . ID=gene-L2557_RS11020;Name=L2557_RS11020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11020 NZ_JAIKUA010000163.1 Protein Homology CDS 5886 6362 . - 0 ID=cds-WP_099660360.1;Parent=gene-L2557_RS11020;Dbxref=GenBank:WP_099660360.1;Name=WP_099660360.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF040077.5;locus_tag=L2557_RS11020;product=DUF6392 family protein;protein_id=WP_099660360.1;transl_table=11 NZ_JAIKUA010000163.1 RefSeq gene 6420 6863 . - . ID=gene-L2557_RS11025;Name=L2557_RS11025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11025 NZ_JAIKUA010000163.1 Protein Homology CDS 6420 6863 . - 0 ID=cds-WP_075671103.1;Parent=gene-L2557_RS11025;Dbxref=GenBank:WP_075671103.1;Name=WP_075671103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536635.1;locus_tag=L2557_RS11025;product=YcgN family cysteine cluster protein;protein_id=WP_075671103.1;transl_table=11 NZ_JAIKUA010000163.1 RefSeq gene 6900 7556 . - . ID=gene-L2557_RS11030;Name=L2557_RS11030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11030 NZ_JAIKUA010000163.1 Protein Homology CDS 6900 7556 . - 0 ID=cds-WP_075671101.1;Parent=gene-L2557_RS11030;Dbxref=GenBank:WP_075671101.1;Name=WP_075671101.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211740.1;locus_tag=L2557_RS11030;product=fumarylacetoacetate hydrolase family protein;protein_id=WP_075671101.1;transl_table=11 NZ_JAIKUA010000163.1 RefSeq gene 7610 8737 . - . ID=gene-L2557_RS11035;Name=L2557_RS11035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11035 NZ_JAIKUA010000163.1 Protein Homology CDS 7610 8737 . - 0 ID=cds-WP_075671099.1;Parent=gene-L2557_RS11035;Dbxref=GenBank:WP_075671099.1;Name=WP_075671099.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536633.1;locus_tag=L2557_RS11035;product=lytic murein transglycosylase;protein_id=WP_075671099.1;transl_table=11 NZ_JAIKUA010000163.1 RefSeq gene 8762 9049 . - . ID=gene-L2557_RS11040;Name=L2557_RS11040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11040 NZ_JAIKUA010000163.1 Protein Homology CDS 8762 9049 . - 0 ID=cds-WP_069369136.1;Parent=gene-L2557_RS11040;Dbxref=GenBank:WP_069369136.1;Name=WP_069369136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247993.1;locus_tag=L2557_RS11040;product=YcgL domain-containing protein;protein_id=WP_069369136.1;transl_table=11 NZ_JAIKUA010000163.1 RefSeq gene 9183 9884 . + . ID=gene-L2557_RS11045;Name=minC;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=L2557_RS11045 NZ_JAIKUA010000163.1 Protein Homology CDS 9183 9884 . + 0 ID=cds-WP_075671097.1;Parent=gene-L2557_RS11045;Dbxref=GenBank:WP_075671097.1;Name=WP_075671097.1;Ontology_term=GO:0000918,GO:1901891,GO:0004857;gbkey=CDS;gene=minC;go_function=enzyme inhibitor activity|0004857||IEA;go_process=division septum site selection|0000918||IEA,regulation of cell septum assembly|1901891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242783.1;locus_tag=L2557_RS11045;product=septum site-determining protein MinC;protein_id=WP_075671097.1;transl_table=11 NZ_JAIKUA010000163.1 RefSeq gene 9907 10719 . + . ID=gene-L2557_RS11050;Name=minD;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=L2557_RS11050 NZ_JAIKUA010000163.1 Protein Homology CDS 9907 10719 . + 0 ID=cds-WP_099660358.1;Parent=gene-L2557_RS11050;Dbxref=GenBank:WP_099660358.1;Name=WP_099660358.1;gbkey=CDS;gene=minD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020801817.1;locus_tag=L2557_RS11050;product=septum site-determining protein MinD;protein_id=WP_099660358.1;transl_table=11 NZ_JAIKUA010000163.1 RefSeq gene 10723 10992 . + . ID=gene-L2557_RS11055;Name=minE;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=L2557_RS11055 NZ_JAIKUA010000163.1 Protein Homology CDS 10723 10992 . + 0 ID=cds-WP_023582089.1;Parent=gene-L2557_RS11055;Dbxref=GenBank:WP_023582089.1;Name=WP_023582089.1;Ontology_term=GO:0032955;gbkey=CDS;gene=minE;go_process=regulation of division septum assembly|0032955||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242781.1;locus_tag=L2557_RS11055;product=cell division topological specificity factor MinE;protein_id=WP_023582089.1;transl_table=11 NZ_JAIKUA010000163.1 RefSeq gene 11366 12484 . - . ID=gene-L2557_RS11060;Name=rnd;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=L2557_RS11060 NZ_JAIKUA010000163.1 Protein Homology CDS 11366 12484 . - 0 ID=cds-WP_075671093.1;Parent=gene-L2557_RS11060;Dbxref=GenBank:WP_075671093.1;Name=WP_075671093.1;Ontology_term=GO:0008033,GO:0003676,GO:0008408,GO:0033890;gbkey=CDS;gene=rnd;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA,ribonuclease D activity|0033890||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536627.1;locus_tag=L2557_RS11060;product=ribonuclease D;protein_id=WP_075671093.1;transl_table=11 NZ_JAIKUA010000163.1 RefSeq gene 12583 14271 . - . ID=gene-L2557_RS11065;Name=fadD;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=L2557_RS11065 NZ_JAIKUA010000163.1 Protein Homology CDS 12583 14271 . - 0 ID=cds-WP_075671091.1;Parent=gene-L2557_RS11065;Dbxref=GenBank:WP_075671091.1;Name=WP_075671091.1;gbkey=CDS;gene=fadD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242778.1;locus_tag=L2557_RS11065;product=long-chain-fatty-acid--CoA ligase FadD;protein_id=WP_075671091.1;transl_table=11 ##sequence-region NZ_JAIKUA010000164.1 1 4204 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000164.1 RefSeq region 1 4204 . + . ID=NZ_JAIKUA010000164.1:1..4204;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000164.1 RefSeq gene 326 835 . - . ID=gene-L2557_RS11070;Name=L2557_RS11070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11070 NZ_JAIKUA010000164.1 Protein Homology CDS 326 835 . - 0 ID=cds-WP_235410047.1;Parent=gene-L2557_RS11070;Dbxref=GenBank:WP_235410047.1;Name=WP_235410047.1;Ontology_term=GO:0016783,GO:0051536;gbkey=CDS;go_function=sulfurtransferase activity|0016783||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002437190.1;locus_tag=L2557_RS11070;product=2-thiouracil desulfurase family protein;protein_id=WP_235410047.1;transl_table=11 NZ_JAIKUA010000164.1 RefSeq gene 1035 1454 . + . ID=gene-L2557_RS11075;Name=L2557_RS11075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11075 NZ_JAIKUA010000164.1 GeneMarkS-2+ CDS 1035 1454 . + 0 ID=cds-WP_235410048.1;Parent=gene-L2557_RS11075;Dbxref=GenBank:WP_235410048.1;Name=WP_235410048.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS11075;product=hypothetical protein;protein_id=WP_235410048.1;transl_table=11 NZ_JAIKUA010000164.1 RefSeq gene 1946 3361 . + . ID=gene-L2557_RS11080;Name=L2557_RS11080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11080 NZ_JAIKUA010000164.1 Protein Homology CDS 1946 3361 . + 0 ID=cds-WP_075674162.1;Parent=gene-L2557_RS11080;Dbxref=GenBank:WP_075674162.1;Name=WP_075674162.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248621.1;locus_tag=L2557_RS11080;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_075674162.1;transl_table=11 NZ_JAIKUA010000164.1 RefSeq gene 3630 4157 . + . ID=gene-L2557_RS11085;Name=L2557_RS11085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11085 NZ_JAIKUA010000164.1 GeneMarkS-2+ CDS 3630 4157 . + 0 ID=cds-WP_075674163.1;Parent=gene-L2557_RS11085;Dbxref=GenBank:WP_075674163.1;Name=WP_075674163.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS11085;product=hypothetical protein;protein_id=WP_075674163.1;transl_table=11 ##sequence-region NZ_JAIKUA010000165.1 1 25673 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000165.1 RefSeq region 1 25673 . + . ID=NZ_JAIKUA010000165.1:1..25673;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000165.1 RefSeq gene 99 860 . - . ID=gene-L2557_RS11090;Name=L2557_RS11090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11090 NZ_JAIKUA010000165.1 Protein Homology CDS 99 860 . - 0 ID=cds-WP_075671993.1;Parent=gene-L2557_RS11090;Dbxref=GenBank:WP_075671993.1;Name=WP_075671993.1;Ontology_term=GO:0015858,GO:0015471,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleoside-specific channel forming porin activity|0015471||IEA;go_process=nucleoside transport|0015858||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827761.1;locus_tag=L2557_RS11090;product=nucleoside-specific channel-forming Tsx family protein;protein_id=WP_075671993.1;transl_table=11 NZ_JAIKUA010000165.1 RefSeq gene 1228 2601 . + . ID=gene-L2557_RS11095;Name=dbpA;gbkey=Gene;gene=dbpA;gene_biotype=protein_coding;locus_tag=L2557_RS11095 NZ_JAIKUA010000165.1 Protein Homology CDS 1228 2601 . + 0 ID=cds-WP_099659969.1;Parent=gene-L2557_RS11095;Dbxref=GenBank:WP_099659969.1;Name=WP_099659969.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=dbpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012769739.1;locus_tag=L2557_RS11095;product=ATP-dependent RNA helicase DbpA;protein_id=WP_099659969.1;transl_table=11 NZ_JAIKUA010000165.1 RefSeq gene 2678 4198 . - . ID=gene-L2557_RS11100;Name=ampG;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=L2557_RS11100 NZ_JAIKUA010000165.1 Protein Homology CDS 2678 4198 . - 0 ID=cds-WP_075671989.1;Parent=gene-L2557_RS11100;Dbxref=GenBank:WP_075671989.1;Name=WP_075671989.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=ampG;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247227.1;locus_tag=L2557_RS11100;product=muropeptide MFS transporter AmpG;protein_id=WP_075671989.1;transl_table=11 NZ_JAIKUA010000165.1 RefSeq gene 4255 4833 . - . ID=gene-L2557_RS11105;Name=L2557_RS11105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11105 NZ_JAIKUA010000165.1 Protein Homology CDS 4255 4833 . - 0 ID=cds-WP_075671987.1;Parent=gene-L2557_RS11105;Dbxref=GenBank:WP_075671987.1;Name=WP_075671987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208646.1;locus_tag=L2557_RS11105;product=YajG family lipoprotein;protein_id=WP_075671987.1;transl_table=11 NZ_JAIKUA010000165.1 RefSeq gene 5174 5488 . + . ID=gene-L2557_RS11110;Name=bolA;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=L2557_RS11110 NZ_JAIKUA010000165.1 Protein Homology CDS 5174 5488 . + 0 ID=cds-WP_075671985.1;Parent=gene-L2557_RS11110;Dbxref=GenBank:WP_075671985.1;Name=WP_075671985.1;gbkey=CDS;gene=bolA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245090.1;locus_tag=L2557_RS11110;product=transcriptional regulator BolA;protein_id=WP_075671985.1;transl_table=11 NZ_JAIKUA010000165.1 RefSeq gene 5810 7114 . + . ID=gene-L2557_RS11115;Name=tig;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=L2557_RS11115 NZ_JAIKUA010000165.1 Protein Homology CDS 5810 7114 . + 0 ID=cds-WP_023580863.1;Parent=gene-L2557_RS11115;Dbxref=GenBank:WP_023580863.1;Name=WP_023580863.1;Ontology_term=GO:0015031,GO:0051083,GO:0003755,GO:0051082,GO:0005854;gbkey=CDS;gene=tig;go_component=nascent polypeptide-associated complex|0005854||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,unfolded protein binding|0051082||IEA;go_process=protein transport|0015031||IEA,'de novo' cotranslational protein folding|0051083||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245089.1;locus_tag=L2557_RS11115;product=trigger factor;protein_id=WP_023580863.1;transl_table=11 NZ_JAIKUA010000165.1 RefSeq gene 7372 7995 . + . ID=gene-L2557_RS11120;Name=clpP;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=L2557_RS11120 NZ_JAIKUA010000165.1 Protein Homology CDS 7372 7995 . + 0 ID=cds-WP_004245088.1;Parent=gene-L2557_RS11120;Dbxref=GenBank:WP_004245088.1;Name=WP_004245088.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0009368;gbkey=CDS;gene=clpP;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245088.1;locus_tag=L2557_RS11120;product=ATP-dependent Clp endopeptidase proteolytic subunit ClpP;protein_id=WP_004245088.1;transl_table=11 NZ_JAIKUA010000165.1 RefSeq gene 8138 9409 . + . ID=gene-L2557_RS11125;Name=clpX;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=L2557_RS11125 NZ_JAIKUA010000165.1 Protein Homology CDS 8138 9409 . + 0 ID=cds-WP_075671983.1;Parent=gene-L2557_RS11125;Dbxref=GenBank:WP_075671983.1;Name=WP_075671983.1;Ontology_term=GO:0005524,GO:0051082,GO:0140662,GO:0009368;gbkey=CDS;gene=clpX;go_component=endopeptidase Clp complex|0009368||IEA;go_function=ATP binding|0005524||IEA,unfolded protein binding|0051082||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001396736.1;locus_tag=L2557_RS11125;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=WP_075671983.1;transl_table=11 NZ_JAIKUA010000165.1 RefSeq gene 9669 12029 . + . ID=gene-L2557_RS11130;Name=lon;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=L2557_RS11130 NZ_JAIKUA010000165.1 Protein Homology CDS 9669 12029 . + 0 ID=cds-WP_075671981.1;Parent=gene-L2557_RS11130;Dbxref=GenBank:WP_075671981.1;Name=WP_075671981.1;Ontology_term=GO:0006508,GO:0004176,GO:0004252,GO:0016887,GO:0043565;gbkey=CDS;gene=lon;go_function=ATP-dependent peptidase activity|0004176||IEA,serine-type endopeptidase activity|0004252||IEA,ATP hydrolysis activity|0016887||IEA,sequence-specific DNA binding|0043565||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004240391.1;locus_tag=L2557_RS11130;product=endopeptidase La;protein_id=WP_075671981.1;transl_table=11 NZ_JAIKUA010000165.1 RefSeq gene 12244 12519 . + . ID=gene-L2557_RS11135;Name=hupB;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=L2557_RS11135 NZ_JAIKUA010000165.1 Protein Homology CDS 12244 12519 . + 0 ID=cds-WP_036911695.1;Parent=gene-L2557_RS11135;Dbxref=GenBank:WP_036911695.1;Name=WP_036911695.1;gbkey=CDS;gene=hupB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247229.1;locus_tag=L2557_RS11135;product=nucleoid-associated protein HU-beta;protein_id=WP_036911695.1;transl_table=11 NZ_JAIKUA010000165.1 RefSeq gene 12996 14873 . + . ID=gene-L2557_RS11140;Name=ppiD;gbkey=Gene;gene=ppiD;gene_biotype=protein_coding;locus_tag=L2557_RS11140 NZ_JAIKUA010000165.1 Protein Homology CDS 12996 14873 . + 0 ID=cds-WP_235410049.1;Parent=gene-L2557_RS11140;Dbxref=GenBank:WP_235410049.1;Name=WP_235410049.1;Ontology_term=GO:0003755;gbkey=CDS;gene=ppiD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245084.1;locus_tag=L2557_RS11140;product=peptidylprolyl isomerase;protein_id=WP_235410049.1;transl_table=11 NZ_JAIKUA010000165.1 RefSeq gene 15163 15534 . + . ID=gene-L2557_RS11145;Name=L2557_RS11145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11145 NZ_JAIKUA010000165.1 Protein Homology CDS 15163 15534 . + 0 ID=cds-WP_223672525.1;Parent=gene-L2557_RS11145;Dbxref=GenBank:WP_223672525.1;Name=WP_223672525.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628271.1;locus_tag=L2557_RS11145;product=ComEA family DNA-binding protein;protein_id=WP_223672525.1;transl_table=11 NZ_JAIKUA010000165.1 RefSeq gene 15784 16188 . + . ID=gene-L2557_RS11150;Name=L2557_RS11150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11150 NZ_JAIKUA010000165.1 Protein Homology CDS 15784 16188 . + 0 ID=cds-WP_023580858.1;Parent=gene-L2557_RS11150;Dbxref=GenBank:WP_023580858.1;Name=WP_023580858.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245082.1;locus_tag=L2557_RS11150;product=acyl-CoA thioesterase;protein_id=WP_023580858.1;transl_table=11 NZ_JAIKUA010000165.1 RefSeq gene 16338 17036 . - . ID=gene-L2557_RS11155;Name=queC;gbkey=Gene;gene=queC;gene_biotype=protein_coding;locus_tag=L2557_RS11155 NZ_JAIKUA010000165.1 Protein Homology CDS 16338 17036 . - 0 ID=cds-WP_075671977.1;Parent=gene-L2557_RS11155;Dbxref=GenBank:WP_075671977.1;Name=WP_075671977.1;gbkey=CDS;gene=queC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252552.1;locus_tag=L2557_RS11155;product=7-cyano-7-deazaguanine synthase QueC;protein_id=WP_075671977.1;transl_table=11 NZ_JAIKUA010000165.1 RefSeq gene 17195 17656 . + . ID=gene-L2557_RS11160;Name=L2557_RS11160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11160 NZ_JAIKUA010000165.1 Protein Homology CDS 17195 17656 . + 0 ID=cds-WP_036911686.1;Parent=gene-L2557_RS11160;Dbxref=GenBank:WP_036911686.1;Name=WP_036911686.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208630.1;locus_tag=L2557_RS11160;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_036911686.1;transl_table=11 NZ_JAIKUA010000165.1 RefSeq gene 17714 19459 . + . ID=gene-L2557_RS11165;Name=L2557_RS11165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11165 NZ_JAIKUA010000165.1 Protein Homology CDS 17714 19459 . + 0 ID=cds-WP_159241714.1;Parent=gene-L2557_RS11165;Dbxref=GenBank:WP_159241714.1;Name=WP_159241714.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247232.1;locus_tag=L2557_RS11165;product=SmdA family multidrug ABC transporter permease/ATP-binding protein;protein_id=WP_159241714.1;transl_table=11 NZ_JAIKUA010000165.1 RefSeq gene 19446 21233 . + . ID=gene-L2557_RS11170;Name=L2557_RS11170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11170 NZ_JAIKUA010000165.1 Protein Homology CDS 19446 21233 . + 0 ID=cds-WP_328253188.1;Parent=gene-L2557_RS11170;Dbxref=GenBank:WP_328253188.1;Name=WP_328253188.1;Ontology_term=GO:0055085,GO:0005524,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628273.1;locus_tag=L2557_RS11170;product=SmdB family multidrug efflux ABC transporter permease/ATP-binding protein;protein_id=WP_328253188.1;transl_table=11 NZ_JAIKUA010000165.1 RefSeq gene 21476 21814 . + . ID=gene-L2557_RS11175;Name=glnK;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=L2557_RS11175 NZ_JAIKUA010000165.1 Protein Homology CDS 21476 21814 . + 0 ID=cds-WP_075671971.1;Parent=gene-L2557_RS11175;Dbxref=GenBank:WP_075671971.1;Name=WP_075671971.1;Ontology_term=GO:0006808,GO:0030234;gbkey=CDS;gene=glnK;go_function=enzyme regulator activity|0030234||IEA;go_process=regulation of nitrogen utilization|0006808||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247234.1;locus_tag=L2557_RS11175;product=P-II family nitrogen regulator;protein_id=WP_075671971.1;transl_table=11 NZ_JAIKUA010000165.1 RefSeq gene 21827 23119 . + . ID=gene-L2557_RS11180;Name=amtB;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=L2557_RS11180 NZ_JAIKUA010000165.1 Protein Homology CDS 21827 23119 . + 0 ID=cds-WP_268830866.1;Parent=gene-L2557_RS11180;Dbxref=GenBank:WP_268830866.1;Name=WP_268830866.1;Ontology_term=GO:0072488,GO:0008519,GO:0005886;gbkey=CDS;gene=amtB;go_component=plasma membrane|0005886||IEA;go_function=ammonium channel activity|0008519||IEA;go_process=ammonium transmembrane transport|0072488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004718723.1;locus_tag=L2557_RS11180;product=ammonium transporter AmtB;protein_id=WP_268830866.1;transl_table=11 NZ_JAIKUA010000165.1 RefSeq gene 23162 24037 . - . ID=gene-L2557_RS11185;Name=tesB;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=L2557_RS11185 NZ_JAIKUA010000165.1 Protein Homology CDS 23162 24037 . - 0 ID=cds-WP_099659964.1;Parent=gene-L2557_RS11185;Dbxref=GenBank:WP_099659964.1;Name=WP_099659964.1;Ontology_term=GO:0006637,GO:0047617;gbkey=CDS;gene=tesB;go_function=fatty acyl-CoA hydrolase activity|0047617||IEA;go_process=acyl-CoA metabolic process|0006637||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367483.1;locus_tag=L2557_RS11185;product=acyl-CoA thioesterase II;protein_id=WP_099659964.1;transl_table=11 NZ_JAIKUA010000165.1 RefSeq gene 24363 24459 . + . ID=gene-L2557_RS11190;Name=ffs;gbkey=Gene;gene=ffs;gene_biotype=SRP_RNA;locus_tag=L2557_RS11190 NZ_JAIKUA010000165.1 cmsearch SRP_RNA 24363 24459 . + . ID=rna-L2557_RS11190;Parent=gene-L2557_RS11190;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=L2557_RS11190;product=signal recognition particle sRNA small type NZ_JAIKUA010000165.1 cmsearch exon 24363 24459 . + . ID=exon-L2557_RS11190-1;Parent=rna-L2557_RS11190;Dbxref=RFAM:RF00169;gbkey=ncRNA;gene=ffs;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=L2557_RS11190;product=signal recognition particle sRNA small type NZ_JAIKUA010000165.1 RefSeq gene 24851 25054 . - . ID=gene-L2557_RS11195;Name=L2557_RS11195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11195 NZ_JAIKUA010000165.1 Protein Homology CDS 24851 25054 . - 0 ID=cds-WP_006535062.1;Parent=gene-L2557_RS11195;Dbxref=GenBank:WP_006535062.1;Name=WP_006535062.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208622.1;locus_tag=L2557_RS11195;product=HHA domain-containing protein;protein_id=WP_006535062.1;transl_table=11 NZ_JAIKUA010000165.1 RefSeq gene 25100 25462 . - . ID=gene-L2557_RS11200;Name=tomB;gbkey=Gene;gene=tomB;gene_biotype=protein_coding;locus_tag=L2557_RS11200 NZ_JAIKUA010000165.1 Protein Homology CDS 25100 25462 . - 0 ID=cds-WP_075671965.1;Parent=gene-L2557_RS11200;Dbxref=GenBank:WP_075671965.1;Name=WP_075671965.1;gbkey=CDS;gene=tomB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245073.1;locus_tag=L2557_RS11200;product=Hha toxicity modulator TomB;protein_id=WP_075671965.1;transl_table=11 ##sequence-region NZ_JAIKUA010000166.1 1 11666 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000166.1 RefSeq region 1 11666 . + . ID=NZ_JAIKUA010000166.1:1..11666;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000166.1 RefSeq gene 199 1905 . + . ID=gene-L2557_RS11205;Name=L2557_RS11205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11205 NZ_JAIKUA010000166.1 Protein Homology CDS 199 1905 . + 0 ID=cds-WP_075673044.1;Parent=gene-L2557_RS11205;Dbxref=GenBank:WP_075673044.1;Name=WP_075673044.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015367342.1;locus_tag=L2557_RS11205;product=methyl-accepting chemotaxis protein;protein_id=WP_075673044.1;transl_table=11 NZ_JAIKUA010000166.1 RefSeq gene 1965 3611 . + . ID=gene-L2557_RS11210;Name=L2557_RS11210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11210 NZ_JAIKUA010000166.1 Protein Homology CDS 1965 3611 . + 0 ID=cds-WP_075673043.1;Parent=gene-L2557_RS11210;Dbxref=GenBank:WP_075673043.1;Name=WP_075673043.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368062.1;locus_tag=L2557_RS11210;product=methyl-accepting chemotaxis protein;protein_id=WP_075673043.1;transl_table=11 NZ_JAIKUA010000166.1 RefSeq gene 3618 4508 . + . ID=gene-L2557_RS11215;Name=cheR;gbkey=Gene;gene=cheR;gene_biotype=protein_coding;locus_tag=L2557_RS11215 NZ_JAIKUA010000166.1 Protein Homology CDS 3618 4508 . + 0 ID=cds-WP_075673042.1;Parent=gene-L2557_RS11215;Dbxref=GenBank:WP_075673042.1;Name=WP_075673042.1;Ontology_term=GO:0008757;gbkey=CDS;gene=cheR;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243555.1;locus_tag=L2557_RS11215;product=protein-glutamate O-methyltransferase CheR;protein_id=WP_075673042.1;transl_table=11 NZ_JAIKUA010000166.1 RefSeq gene 4501 5553 . + . ID=gene-L2557_RS11220;Name=L2557_RS11220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11220 NZ_JAIKUA010000166.1 Protein Homology CDS 4501 5553 . + 0 ID=cds-WP_075673041.1;Parent=gene-L2557_RS11220;Dbxref=GenBank:WP_075673041.1;Name=WP_075673041.1;Ontology_term=GO:0006482,GO:0006935,GO:0018277,GO:0000156,GO:0008984,GO:0050568,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=phosphorelay response regulator activity|0000156||IEA,protein-glutamate methylesterase activity|0008984||IEA,protein-glutamine glutaminase activity|0050568||IEA;go_process=protein demethylation|0006482||IEA,chemotaxis|0006935||IEA,protein deamination|0018277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460874.1;locus_tag=L2557_RS11220;product=protein-glutamate methylesterase/protein-glutamine glutaminase;protein_id=WP_075673041.1;transl_table=11 NZ_JAIKUA010000166.1 RefSeq gene 5612 6001 . + . ID=gene-L2557_RS11225;Name=cheY;gbkey=Gene;gene=cheY;gene_biotype=protein_coding;locus_tag=L2557_RS11225 NZ_JAIKUA010000166.1 Protein Homology CDS 5612 6001 . + 0 ID=cds-WP_023581807.1;Parent=gene-L2557_RS11225;Dbxref=GenBank:WP_023581807.1;Name=WP_023581807.1;Ontology_term=GO:0000160;gbkey=CDS;gene=cheY;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210873.1;locus_tag=L2557_RS11225;product=chemotaxis response regulator CheY;protein_id=WP_023581807.1;transl_table=11 NZ_JAIKUA010000166.1 RefSeq gene 6011 6667 . + . ID=gene-L2557_RS11230;Name=cheZ;gbkey=Gene;gene=cheZ;gene_biotype=protein_coding;locus_tag=L2557_RS11230 NZ_JAIKUA010000166.1 Protein Homology CDS 6011 6667 . + 0 ID=cds-WP_075673040.1;Parent=gene-L2557_RS11230;Dbxref=GenBank:WP_075673040.1;Name=WP_075673040.1;Ontology_term=GO:0050920,GO:0003824;gbkey=CDS;gene=cheZ;go_function=catalytic activity|0003824||IEA;go_process=regulation of chemotaxis|0050920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210872.1;locus_tag=L2557_RS11230;product=protein phosphatase CheZ;protein_id=WP_075673040.1;transl_table=11 NZ_JAIKUA010000166.1 RefSeq gene 7091 8239 . + . ID=gene-L2557_RS11235;Name=flhB;gbkey=Gene;gene=flhB;gene_biotype=protein_coding;locus_tag=L2557_RS11235 NZ_JAIKUA010000166.1 Protein Homology CDS 7091 8239 . + 0 ID=cds-WP_075673039.1;Parent=gene-L2557_RS11235;Dbxref=GenBank:WP_075673039.1;Name=WP_075673039.1;Ontology_term=GO:0015031,GO:0044780,GO:0016020;gbkey=CDS;gene=flhB;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934847.1;locus_tag=L2557_RS11235;product=flagellar biosynthesis protein FlhB;protein_id=WP_075673039.1;transl_table=11 NZ_JAIKUA010000166.1 RefSeq gene 8232 10322 . + . ID=gene-L2557_RS11240;Name=flhA;gbkey=Gene;gene=flhA;gene_biotype=protein_coding;locus_tag=L2557_RS11240 NZ_JAIKUA010000166.1 Protein Homology CDS 8232 10322 . + 0 ID=cds-WP_099660624.1;Parent=gene-L2557_RS11240;Dbxref=GenBank:WP_099660624.1;Name=WP_099660624.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=flhA;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243546.1;locus_tag=L2557_RS11240;product=flagellar biosynthesis protein FlhA;protein_id=WP_099660624.1;transl_table=11 NZ_JAIKUA010000166.1 RefSeq gene 10655 11095 . - . ID=gene-L2557_RS11245;Name=L2557_RS11245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11245 NZ_JAIKUA010000166.1 Protein Homology CDS 10655 11095 . - 0 ID=cds-WP_083629099.1;Parent=gene-L2557_RS11245;Dbxref=GenBank:WP_083629099.1;Name=WP_083629099.1;Ontology_term=GO:0044780;gbkey=CDS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248343.1;locus_tag=L2557_RS11245;product=flagella synthesis protein FlgN;protein_id=WP_083629099.1;transl_table=11 NZ_JAIKUA010000166.1 RefSeq gene 11109 11408 . - . ID=gene-L2557_RS11250;Name=flgM;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=L2557_RS11250 NZ_JAIKUA010000166.1 Protein Homology CDS 11109 11408 . - 0 ID=cds-WP_075673036.1;Parent=gene-L2557_RS11250;Dbxref=GenBank:WP_075673036.1;Name=WP_075673036.1;Ontology_term=GO:0045892;gbkey=CDS;gene=flgM;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248342.1;locus_tag=L2557_RS11250;product=flagellar biosynthesis anti-sigma factor FlgM;protein_id=WP_075673036.1;transl_table=11 ##sequence-region NZ_JAIKUA010000167.1 1 3102 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000167.1 RefSeq region 1 3102 . + . ID=NZ_JAIKUA010000167.1:1..3102;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000167.1 RefSeq gene 86 1090 . - . ID=gene-L2557_RS11255;Name=hcr;gbkey=Gene;gene=hcr;gene_biotype=protein_coding;locus_tag=L2557_RS11255 NZ_JAIKUA010000167.1 Protein Homology CDS 86 1090 . - 0 ID=cds-WP_075670725.1;Parent=gene-L2557_RS11255;Dbxref=GenBank:WP_075670725.1;Name=WP_075670725.1;Ontology_term=GO:0016491,GO:0051536;gbkey=CDS;gene=hcr;go_function=oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827199.1;locus_tag=L2557_RS11255;product=NADH oxidoreductase;protein_id=WP_075670725.1;transl_table=11 NZ_JAIKUA010000167.1 RefSeq gene 1149 2801 . - . ID=gene-L2557_RS11260;Name=hcp;gbkey=Gene;gene=hcp;gene_biotype=protein_coding;gene_synonym=priS;locus_tag=L2557_RS11260 NZ_JAIKUA010000167.1 Protein Homology CDS 1149 2801 . - 0 ID=cds-WP_099659295.1;Parent=gene-L2557_RS11260;Dbxref=GenBank:WP_099659295.1;Name=WP_099659295.1;Ontology_term=GO:0016661,GO:0051536;gbkey=CDS;gene=hcp;go_function=oxidoreductase activity%2C acting on other nitrogenous compounds as donors|0016661||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094205.1;locus_tag=L2557_RS11260;product=hydroxylamine reductase;protein_id=WP_099659295.1;transl_table=11 ##sequence-region NZ_JAIKUA010000168.1 1 19520 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000168.1 RefSeq region 1 19520 . + . ID=NZ_JAIKUA010000168.1:1..19520;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000168.1 RefSeq gene 77 604 . + . ID=gene-L2557_RS11265;Name=L2557_RS11265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11265 NZ_JAIKUA010000168.1 Protein Homology CDS 77 604 . + 0 ID=cds-WP_083629102.1;Parent=gene-L2557_RS11265;Dbxref=GenBank:WP_083629102.1;Name=WP_083629102.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025501.6;locus_tag=L2557_RS11265;product=DUF4303 domain-containing protein;protein_id=WP_083629102.1;transl_table=11 NZ_JAIKUA010000168.1 RefSeq gene 954 2081 . - . ID=gene-L2557_RS11270;Name=L2557_RS11270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11270 NZ_JAIKUA010000168.1 Protein Homology CDS 954 2081 . - 0 ID=cds-WP_099659750.1;Parent=gene-L2557_RS11270;Dbxref=GenBank:WP_099659750.1;Name=WP_099659750.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657190.1;locus_tag=L2557_RS11270;product=ABC transporter substrate-binding protein;protein_id=WP_099659750.1;transl_table=11 NZ_JAIKUA010000168.1 RefSeq gene 2439 3638 . + . ID=gene-L2557_RS11275;Name=L2557_RS11275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11275 NZ_JAIKUA010000168.1 Protein Homology CDS 2439 3638 . + 0 ID=cds-WP_159241921.1;Parent=gene-L2557_RS11275;Dbxref=GenBank:WP_159241921.1;Name=WP_159241921.1;Ontology_term=GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;inference=COORDINATES: protein motif:HMM:NF012515.6;locus_tag=L2557_RS11275;product=ribokinase;protein_id=WP_159241921.1;transl_table=11 NZ_JAIKUA010000168.1 RefSeq gene 3692 4879 . + . ID=gene-L2557_RS11280;Name=L2557_RS11280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11280 NZ_JAIKUA010000168.1 Protein Homology CDS 3692 4879 . + 0 ID=cds-WP_159241920.1;Parent=gene-L2557_RS11280;Dbxref=GenBank:WP_159241920.1;Name=WP_159241920.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263948.1;locus_tag=L2557_RS11280;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_159241920.1;transl_table=11 NZ_JAIKUA010000168.1 RefSeq gene 4955 5887 . + . ID=gene-L2557_RS11285;Name=L2557_RS11285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11285 NZ_JAIKUA010000168.1 Protein Homology CDS 4955 5887 . + 0 ID=cds-WP_099659753.1;Parent=gene-L2557_RS11285;Dbxref=GenBank:WP_099659753.1;Name=WP_099659753.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657362.1;locus_tag=L2557_RS11285;product=nucleoside hydrolase;protein_id=WP_099659753.1;transl_table=11 NZ_JAIKUA010000168.1 RefSeq gene 6330 6417 . - . ID=gene-L2557_RS11290;Name=L2557_RS11290;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS11290 NZ_JAIKUA010000168.1 tRNAscan-SE tRNA 6330 6417 . - . ID=rna-L2557_RS11290;Parent=gene-L2557_RS11290;anticodon=(pos:complement(6381..6383));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS11290;product=tRNA-Ser NZ_JAIKUA010000168.1 tRNAscan-SE exon 6330 6417 . - . ID=exon-L2557_RS11290-1;Parent=rna-L2557_RS11290;anticodon=(pos:complement(6381..6383));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS11290;product=tRNA-Ser NZ_JAIKUA010000168.1 RefSeq gene 6600 6929 . + . ID=gene-L2557_RS11295;Name=tusE;gbkey=Gene;gene=tusE;gene_biotype=protein_coding;locus_tag=L2557_RS11295 NZ_JAIKUA010000168.1 Protein Homology CDS 6600 6929 . + 0 ID=cds-WP_023581360.1;Parent=gene-L2557_RS11295;Dbxref=GenBank:WP_023581360.1;Name=WP_023581360.1;gbkey=CDS;gene=tusE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537349.1;locus_tag=L2557_RS11295;product=sulfurtransferase TusE;protein_id=WP_023581360.1;transl_table=11 NZ_JAIKUA010000168.1 RefSeq gene 6973 7254 . - . ID=gene-L2557_RS11300;Name=L2557_RS11300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11300 NZ_JAIKUA010000168.1 Protein Homology CDS 6973 7254 . - 0 ID=cds-WP_075673147.1;Parent=gene-L2557_RS11300;Dbxref=GenBank:WP_075673147.1;Name=WP_075673147.1;Ontology_term=GO:0003998;gbkey=CDS;go_function=acylphosphatase activity|0003998||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537350.1;locus_tag=L2557_RS11300;product=acylphosphatase;protein_id=WP_075673147.1;transl_table=11 NZ_JAIKUA010000168.1 RefSeq gene 7452 7772 . + . ID=gene-L2557_RS11305;Name=hspQ;gbkey=Gene;gene=hspQ;gene_biotype=protein_coding;locus_tag=L2557_RS11305 NZ_JAIKUA010000168.1 Protein Homology CDS 7452 7772 . + 0 ID=cds-WP_006537351.1;Parent=gene-L2557_RS11305;Dbxref=GenBank:WP_006537351.1;Name=WP_006537351.1;gbkey=CDS;gene=hspQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244691.1;locus_tag=L2557_RS11305;product=heat shock protein HspQ;protein_id=WP_006537351.1;transl_table=11 NZ_JAIKUA010000168.1 RefSeq gene 7851 8264 . - . ID=gene-L2557_RS11310;Name=L2557_RS11310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11310 NZ_JAIKUA010000168.1 Protein Homology CDS 7851 8264 . - 0 ID=cds-WP_075673146.1;Parent=gene-L2557_RS11310;Dbxref=GenBank:WP_075673146.1;Name=WP_075673146.1;Ontology_term=GO:0120225;gbkey=CDS;go_function=coenzyme A binding|0120225||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247691.1;locus_tag=L2557_RS11310;product=CoA-binding protein;protein_id=WP_075673146.1;transl_table=11 NZ_JAIKUA010000168.1 RefSeq gene 8402 8860 . + . ID=gene-L2557_RS11315;Name=L2557_RS11315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11315 NZ_JAIKUA010000168.1 Protein Homology CDS 8402 8860 . + 0 ID=cds-WP_075673145.1;Parent=gene-L2557_RS11315;Dbxref=GenBank:WP_075673145.1;Name=WP_075673145.1;Ontology_term=GO:0019242,GO:0008929;gbkey=CDS;go_function=methylglyoxal synthase activity|0008929||IEA;go_process=methylglyoxal biosynthetic process|0019242||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244689.1;locus_tag=L2557_RS11315;product=methylglyoxal synthase;protein_id=WP_075673145.1;transl_table=11 NZ_JAIKUA010000168.1 RefSeq gene 8862 10913 . - . ID=gene-L2557_RS11320;Name=helD;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=L2557_RS11320 NZ_JAIKUA010000168.1 Protein Homology CDS 8862 10913 . - 0 ID=cds-WP_099659754.1;Parent=gene-L2557_RS11320;Dbxref=GenBank:WP_099659754.1;Name=WP_099659754.1;Ontology_term=GO:0003677,GO:0003678,GO:0005524;gbkey=CDS;gene=helD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367741.1;locus_tag=L2557_RS11320;product=DNA helicase IV;protein_id=WP_099659754.1;transl_table=11 NZ_JAIKUA010000168.1 RefSeq gene 11028 13196 . + . ID=gene-L2557_RS11325;Name=yccS;gbkey=Gene;gene=yccS;gene_biotype=protein_coding;locus_tag=L2557_RS11325 NZ_JAIKUA010000168.1 Protein Homology CDS 11028 13196 . + 0 ID=cds-WP_075673143.1;Parent=gene-L2557_RS11325;Dbxref=GenBank:WP_075673143.1;Name=WP_075673143.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yccS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012987343.1;locus_tag=L2557_RS11325;product=YccS family putative transporter;protein_id=WP_075673143.1;transl_table=11 NZ_JAIKUA010000168.1 RefSeq gene 13267 13875 . - . ID=gene-L2557_RS11330;Name=L2557_RS11330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11330 NZ_JAIKUA010000168.1 Protein Homology CDS 13267 13875 . - 0 ID=cds-WP_075673142.1;Parent=gene-L2557_RS11330;Dbxref=GenBank:WP_075673142.1;Name=WP_075673142.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367740.1;locus_tag=L2557_RS11330;product=TfoX/Sxy family DNA transformation protein;protein_id=WP_075673142.1;transl_table=11 NZ_JAIKUA010000168.1 RefSeq gene 14105 14656 . + . ID=gene-L2557_RS11335;Name=sulA;gbkey=Gene;gene=sulA;gene_biotype=protein_coding;locus_tag=L2557_RS11335 NZ_JAIKUA010000168.1 Protein Homology CDS 14105 14656 . + 0 ID=cds-WP_156733157.1;Parent=gene-L2557_RS11335;Dbxref=GenBank:WP_156733157.1;Name=WP_156733157.1;Ontology_term=GO:0009432,GO:0051782,GO:0005515;gbkey=CDS;gene=sulA;go_function=protein binding|0005515||IEA;go_process=SOS response|0009432||IEA,negative regulation of cell division|0051782||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244684.1;locus_tag=L2557_RS11335;product=SOS-induced cell division inhibitor SulA;protein_id=WP_156733157.1;transl_table=11 NZ_JAIKUA010000168.1 RefSeq gene 15004 16095 . + . ID=gene-L2557_RS11340;Name=ompA;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=L2557_RS11340 NZ_JAIKUA010000168.1 Protein Homology CDS 15004 16095 . + 0 ID=cds-WP_075673140.1;Parent=gene-L2557_RS11340;Dbxref=GenBank:WP_075673140.1;Name=WP_075673140.1;Ontology_term=GO:0015288;gbkey=CDS;gene=ompA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012441820.1;locus_tag=L2557_RS11340;product=porin OmpA;protein_id=WP_075673140.1;transl_table=11 NZ_JAIKUA010000168.1 RefSeq gene 16296 16757 . - . ID=gene-L2557_RS11345;Name=matP;gbkey=Gene;gene=matP;gene_biotype=protein_coding;locus_tag=L2557_RS11345 NZ_JAIKUA010000168.1 Protein Homology CDS 16296 16757 . - 0 ID=cds-WP_075673139.1;Parent=gene-L2557_RS11345;Dbxref=GenBank:WP_075673139.1;Name=WP_075673139.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=matP;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537365.1;locus_tag=L2557_RS11345;product=macrodomain Ter protein MatP;protein_id=WP_075673139.1;transl_table=11 NZ_JAIKUA010000168.1 RefSeq gene 17122 18864 . + . ID=gene-L2557_RS11350;Name=L2557_RS11350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11350 NZ_JAIKUA010000168.1 Protein Homology CDS 17122 18864 . + 0 ID=cds-WP_159241916.1;Parent=gene-L2557_RS11350;Dbxref=GenBank:WP_159241916.1;Name=WP_159241916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367739.1;locus_tag=L2557_RS11350;product=AAA family ATPase;protein_id=WP_159241916.1;transl_table=11 NZ_JAIKUA010000168.1 RefSeq gene 18948 19466 . + . ID=gene-L2557_RS11355;Name=fabA;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=L2557_RS11355 NZ_JAIKUA010000168.1 Protein Homology CDS 18948 19466 . + 0 ID=cds-WP_023581351.1;Parent=gene-L2557_RS11355;Dbxref=GenBank:WP_023581351.1;Name=WP_023581351.1;Ontology_term=GO:0006633,GO:0019171;gbkey=CDS;gene=fabA;go_function=(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity|0019171||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244680.1;locus_tag=L2557_RS11355;product=bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase;protein_id=WP_023581351.1;transl_table=11 ##sequence-region NZ_JAIKUA010000169.1 1 23829 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000169.1 RefSeq region 1 23829 . + . ID=NZ_JAIKUA010000169.1:1..23829;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000169.1 RefSeq gene 154 1533 . - . ID=gene-L2557_RS11360;Name=lysC;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=L2557_RS11360 NZ_JAIKUA010000169.1 Protein Homology CDS 154 1533 . - 0 ID=cds-WP_223673908.1;Parent=gene-L2557_RS11360;Dbxref=GenBank:WP_223673908.1;Name=WP_223673908.1;Ontology_term=GO:0009089,GO:0004072;gbkey=CDS;gene=lysC;go_function=aspartate kinase activity|0004072||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249155.1;locus_tag=L2557_RS11360;product=lysine-sensitive aspartokinase 3;protein_id=WP_223673908.1;transl_table=11 NZ_JAIKUA010000169.1 RefSeq gene 1799 3445 . + . ID=gene-L2557_RS11365;Name=pgi;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=L2557_RS11365 NZ_JAIKUA010000169.1 Protein Homology CDS 1799 3445 . + 0 ID=cds-WP_164530755.1;Parent=gene-L2557_RS11365;Dbxref=GenBank:WP_164530755.1;Name=WP_164530755.1;Ontology_term=GO:0006094,GO:0006096,GO:0004347;gbkey=CDS;gene=pgi;go_function=glucose-6-phosphate isomerase activity|0004347||IEA;go_process=gluconeogenesis|0006094||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245915.1;locus_tag=L2557_RS11365;product=glucose-6-phosphate isomerase;protein_id=WP_164530755.1;transl_table=11 NZ_JAIKUA010000169.1 RefSeq gene 3667 4176 . + . ID=gene-L2557_RS11370;Name=ubiC;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=L2557_RS11370 NZ_JAIKUA010000169.1 Protein Homology CDS 3667 4176 . + 0 ID=cds-WP_075673070.1;Parent=gene-L2557_RS11370;Dbxref=GenBank:WP_075673070.1;Name=WP_075673070.1;Ontology_term=GO:0008813;gbkey=CDS;gene=ubiC;go_function=chorismate lyase activity|0008813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245914.1;locus_tag=L2557_RS11370;product=chorismate lyase;protein_id=WP_075673070.1;transl_table=11 NZ_JAIKUA010000169.1 RefSeq gene 4205 5059 . + . ID=gene-L2557_RS11375;Name=ubiA;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=L2557_RS11375 NZ_JAIKUA010000169.1 Protein Homology CDS 4205 5059 . + 0 ID=cds-WP_075673069.1;Parent=gene-L2557_RS11375;Dbxref=GenBank:WP_075673069.1;Name=WP_075673069.1;Ontology_term=GO:0006744,GO:0008412;gbkey=CDS;gene=ubiA;go_function=4-hydroxybenzoate polyprenyltransferase activity|0008412||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250107.1;locus_tag=L2557_RS11375;product=4-hydroxybenzoate octaprenyltransferase;protein_id=WP_075673069.1;transl_table=11 NZ_JAIKUA010000169.1 RefSeq gene 5161 7644 . - . ID=gene-L2557_RS11380;Name=plsB;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=L2557_RS11380 NZ_JAIKUA010000169.1 Protein Homology CDS 5161 7644 . - 0 ID=cds-WP_099660507.1;Parent=gene-L2557_RS11380;Dbxref=GenBank:WP_099660507.1;Name=WP_099660507.1;Ontology_term=GO:0008654,GO:0004366;gbkey=CDS;gene=plsB;go_function=glycerol-3-phosphate O-acyltransferase activity|0004366||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249159.1;locus_tag=L2557_RS11380;product=glycerol-3-phosphate 1-O-acyltransferase PlsB;protein_id=WP_099660507.1;transl_table=11 NZ_JAIKUA010000169.1 RefSeq gene 7775 8146 . + . ID=gene-L2557_RS11385;Name=L2557_RS11385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11385 NZ_JAIKUA010000169.1 Protein Homology CDS 7775 8146 . + 0 ID=cds-WP_006536373.1;Parent=gene-L2557_RS11385;Dbxref=GenBank:WP_006536373.1;Name=WP_006536373.1;Ontology_term=GO:0006654,GO:0008654,GO:0016310,GO:0004143,GO:0005524,GO:0046872,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP-dependent diacylglycerol kinase activity|0004143||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA,phospholipid biosynthetic process|0008654||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536373.1;locus_tag=L2557_RS11385;product=diacylglycerol kinase;protein_id=WP_006536373.1;transl_table=11 NZ_JAIKUA010000169.1 RefSeq gene 8274 8885 . + . ID=gene-L2557_RS11390;Name=lexA;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=L2557_RS11390 NZ_JAIKUA010000169.1 Protein Homology CDS 8274 8885 . + 0 ID=cds-WP_023583074.1;Parent=gene-L2557_RS11390;Dbxref=GenBank:WP_023583074.1;Name=WP_023583074.1;Ontology_term=GO:0009432,GO:0045892,GO:0004252;gbkey=CDS;gene=lexA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=SOS response|0009432||IEA,negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463102.1;locus_tag=L2557_RS11390;product=transcriptional repressor LexA;protein_id=WP_023583074.1;transl_table=11 NZ_JAIKUA010000169.1 RefSeq gene 9088 9618 . - . ID=gene-L2557_RS11395;Name=zur;gbkey=Gene;gene=zur;gene_biotype=protein_coding;locus_tag=L2557_RS11395 NZ_JAIKUA010000169.1 Protein Homology CDS 9088 9618 . - 0 ID=cds-WP_006536370.1;Parent=gene-L2557_RS11395;Dbxref=GenBank:WP_006536370.1;Name=WP_006536370.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=zur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245904.1;locus_tag=L2557_RS11395;product=zinc uptake transcriptional repressor Zur;protein_id=WP_006536370.1;transl_table=11 NZ_JAIKUA010000169.1 RefSeq gene 9897 10424 . - . ID=gene-L2557_RS11400;Name=ssb1;gbkey=Gene;gene=ssb1;gene_biotype=protein_coding;locus_tag=L2557_RS11400 NZ_JAIKUA010000169.1 Protein Homology CDS 9897 10424 . - 0 ID=cds-WP_075673066.1;Parent=gene-L2557_RS11400;Dbxref=GenBank:WP_075673066.1;Name=WP_075673066.1;gbkey=CDS;gene=ssb1;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224583.1;locus_tag=L2557_RS11400;product=single-stranded DNA-binding protein SSB1;protein_id=WP_075673066.1;transl_table=11 NZ_JAIKUA010000169.1 RefSeq gene 10677 13511 . + . ID=gene-L2557_RS11405;Name=uvrA;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=L2557_RS11405 NZ_JAIKUA010000169.1 Protein Homology CDS 10677 13511 . + 0 ID=cds-WP_191901633.1;Parent=gene-L2557_RS11405;Dbxref=GenBank:WP_191901633.1;Name=WP_191901633.1;Ontology_term=GO:0006289,GO:0003677,GO:0005524,GO:0016887;gbkey=CDS;gene=uvrA;go_function=DNA binding|0003677||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=nucleotide-excision repair|0006289||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249165.1;locus_tag=L2557_RS11405;product=excinuclease ABC subunit UvrA;protein_id=WP_191901633.1;transl_table=11 NZ_JAIKUA010000169.1 RefSeq gene 14181 15512 . + . ID=gene-L2557_RS11410;Name=L2557_RS11410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11410 NZ_JAIKUA010000169.1 Protein Homology CDS 14181 15512 . + 0 ID=cds-WP_075673064.1;Parent=gene-L2557_RS11410;Dbxref=GenBank:WP_075673064.1;Name=WP_075673064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006818180.1;locus_tag=L2557_RS11410;product=SLC5/6 family protein;protein_id=WP_075673064.1;transl_table=11 NZ_JAIKUA010000169.1 RefSeq gene 15577 16926 . + . ID=gene-L2557_RS11415;Name=L2557_RS11415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11415 NZ_JAIKUA010000169.1 Protein Homology CDS 15577 16926 . + 0 ID=cds-WP_099660506.1;Parent=gene-L2557_RS11415;Dbxref=GenBank:WP_099660506.1;Name=WP_099660506.1;Ontology_term=GO:0051539,GO:0080146;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,L-cysteine desulfhydrase activity|0080146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536364.1;locus_tag=L2557_RS11415;product=L-cysteine desulfidase family protein;protein_id=WP_099660506.1;transl_table=11 NZ_JAIKUA010000169.1 RefSeq gene 17031 18227 . - . ID=gene-L2557_RS11420;Name=L2557_RS11420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11420 NZ_JAIKUA010000169.1 Protein Homology CDS 17031 18227 . - 0 ID=cds-WP_075673062.1;Parent=gene-L2557_RS11420;Dbxref=GenBank:WP_075673062.1;Name=WP_075673062.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368490.1;locus_tag=L2557_RS11420;product=amino acid aminotransferase;protein_id=WP_075673062.1;transl_table=11 NZ_JAIKUA010000169.1 RefSeq gene 18281 19372 . - . ID=gene-L2557_RS11425;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=L2557_RS11425 NZ_JAIKUA010000169.1 Protein Homology CDS 18281 19372 . - 0 ID=cds-WP_075673061.1;Parent=gene-L2557_RS11425;Dbxref=GenBank:WP_075673061.1;Name=WP_075673061.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536361.1;locus_tag=L2557_RS11425;product=alanine racemase;protein_id=WP_075673061.1;transl_table=11 NZ_JAIKUA010000169.1 RefSeq gene 19413 20822 . - . ID=gene-L2557_RS11430;Name=dnaB;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=L2557_RS11430 NZ_JAIKUA010000169.1 Protein Homology CDS 19413 20822 . - 0 ID=cds-WP_036934568.1;Parent=gene-L2557_RS11430;Dbxref=GenBank:WP_036934568.1;Name=WP_036934568.1;gbkey=CDS;gene=dnaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012764371.1;locus_tag=L2557_RS11430;product=replicative DNA helicase;protein_id=WP_036934568.1;transl_table=11 NZ_JAIKUA010000169.1 RefSeq gene 20976 21959 . + . ID=gene-L2557_RS11435;Name=L2557_RS11435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11435 NZ_JAIKUA010000169.1 Protein Homology CDS 20976 21959 . + 0 ID=cds-WP_235410052.1;Parent=gene-L2557_RS11435;Dbxref=GenBank:WP_235410052.1;Name=WP_235410052.1;Ontology_term=GO:0008270,GO:0016491;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245895.1;locus_tag=L2557_RS11435;product=quinone oxidoreductase;protein_id=WP_235410052.1;transl_table=11 NZ_JAIKUA010000169.1 RefSeq gene 22027 23061 . - . ID=gene-L2557_RS11440;Name=dusA;gbkey=Gene;gene=dusA;gene_biotype=protein_coding;locus_tag=L2557_RS11440 NZ_JAIKUA010000169.1 Protein Homology CDS 22027 23061 . - 0 ID=cds-WP_223673904.1;Parent=gene-L2557_RS11440;Dbxref=GenBank:WP_223673904.1;Name=WP_223673904.1;Ontology_term=GO:0002943,GO:0017150,GO:0050660;gbkey=CDS;gene=dusA;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA dihydrouridine synthesis|0002943||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249169.1;locus_tag=L2557_RS11440;product=tRNA dihydrouridine(20/20a) synthase DusA;protein_id=WP_223673904.1;transl_table=11 NZ_JAIKUA010000169.1 RefSeq gene 23231 23818 . + . ID=gene-L2557_RS11445;Name=cbrC;gbkey=Gene;gene=cbrC;gene_biotype=protein_coding;locus_tag=L2557_RS11445 NZ_JAIKUA010000169.1 Protein Homology CDS 23231 23818 . + 0 ID=cds-WP_075673058.1;Parent=gene-L2557_RS11445;Dbxref=GenBank:WP_075673058.1;Name=WP_075673058.1;Ontology_term=GO:0030153;gbkey=CDS;gene=cbrC;go_process=bacteriocin immunity|0030153||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000193072.1;locus_tag=L2557_RS11445;product=PF03691 family colicin E2 tolerance protein CbrC;protein_id=WP_075673058.1;transl_table=11 ##sequence-region NZ_JAIKUA010000017.1 1 36528 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000017.1 RefSeq region 1 36528 . + . ID=NZ_JAIKUA010000017.1:1..36528;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000017.1 RefSeq gene 312 1706 . + . ID=gene-L2557_RS01655;Name=chiP;gbkey=Gene;gene=chiP;gene_biotype=protein_coding;locus_tag=L2557_RS01655 NZ_JAIKUA010000017.1 Protein Homology CDS 312 1706 . + 0 ID=cds-WP_098943876.1;Parent=gene-L2557_RS01655;Dbxref=GenBank:WP_098943876.1;Name=WP_098943876.1;Ontology_term=GO:0015774,GO:0052778,GO:0015288;gbkey=CDS;gene=chiP;go_function=porin activity|0015288||IEA;go_process=polysaccharide transport|0015774||IEA,diacetylchitobiose metabolic process|0052778||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649494.1;locus_tag=L2557_RS01655;product=chitoporin ChiP;protein_id=WP_098943876.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 2256 3095 . + . ID=gene-L2557_RS01660;Name=L2557_RS01660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01660 NZ_JAIKUA010000017.1 Protein Homology CDS 2256 3095 . + 0 ID=cds-WP_075671615.1;Parent=gene-L2557_RS01660;Dbxref=GenBank:WP_075671615.1;Name=WP_075671615.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004240575.1;locus_tag=L2557_RS01660;product=DUF817 domain-containing protein;protein_id=WP_075671615.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 3175 3621 . - . ID=gene-L2557_RS01665;Name=fur;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=L2557_RS01665 NZ_JAIKUA010000017.1 Protein Homology CDS 3175 3621 . - 0 ID=cds-WP_023581171.1;Parent=gene-L2557_RS01665;Dbxref=GenBank:WP_023581171.1;Name=WP_023581171.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=fur;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537692.1;locus_tag=L2557_RS01665;product=ferric iron uptake transcriptional regulator;protein_id=WP_023581171.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 3811 4338 . - . ID=gene-L2557_RS01670;Name=fldA;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=L2557_RS01670 NZ_JAIKUA010000017.1 Protein Homology CDS 3811 4338 . - 0 ID=cds-WP_004244384.1;Parent=gene-L2557_RS01670;Dbxref=GenBank:WP_004244384.1;Name=WP_004244384.1;gbkey=CDS;gene=fldA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013576468.1;locus_tag=L2557_RS01670;product=flavodoxin FldA;protein_id=WP_004244384.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 4612 4920 . - . ID=gene-L2557_RS01675;Name=ybfE;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=L2557_RS01675 NZ_JAIKUA010000017.1 Protein Homology CDS 4612 4920 . - 0 ID=cds-WP_075671657.1;Parent=gene-L2557_RS01675;Dbxref=GenBank:WP_075671657.1;Name=WP_075671657.1;gbkey=CDS;gene=ybfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244385.1;locus_tag=L2557_RS01675;product=LexA regulated protein;protein_id=WP_075671657.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 5132 5914 . - . ID=gene-L2557_RS01680;Name=ybfF;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=L2557_RS01680 NZ_JAIKUA010000017.1 Protein Homology CDS 5132 5914 . - 0 ID=cds-WP_099659826.1;Parent=gene-L2557_RS01680;Dbxref=GenBank:WP_099659826.1;Name=WP_099659826.1;gbkey=CDS;gene=ybfF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004965871.1;locus_tag=L2557_RS01680;product=esterase;protein_id=WP_099659826.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 6374 6925 . + . ID=gene-L2557_RS01685;Name=seqA;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=L2557_RS01685 NZ_JAIKUA010000017.1 Protein Homology CDS 6374 6925 . + 0 ID=cds-WP_075671617.1;Parent=gene-L2557_RS01685;Dbxref=GenBank:WP_075671617.1;Name=WP_075671617.1;Ontology_term=GO:0032297,GO:0003677;gbkey=CDS;gene=seqA;go_function=DNA binding|0003677||IEA;go_process=negative regulation of DNA-templated DNA replication initiation|0032297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_041689343.1;locus_tag=L2557_RS01685;product=replication initiation negative regulator SeqA;protein_id=WP_075671617.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 7000 8640 . + . ID=gene-L2557_RS01690;Name=pgm;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=L2557_RS01690 NZ_JAIKUA010000017.1 Protein Homology CDS 7000 8640 . + 0 ID=cds-WP_075671619.1;Parent=gene-L2557_RS01690;Dbxref=GenBank:WP_075671619.1;Name=WP_075671619.1;Ontology_term=GO:0005975,GO:0004614;gbkey=CDS;gene=pgm;go_function=phosphoglucomutase activity|0004614||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000974366.1;locus_tag=L2557_RS01690;product=phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosphate-dependent);protein_id=WP_075671619.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 8787 9269 . + . ID=gene-L2557_RS01695;Name=L2557_RS01695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01695 NZ_JAIKUA010000017.1 Protein Homology CDS 8787 9269 . + 0 ID=cds-WP_075671621.1;Parent=gene-L2557_RS01695;Dbxref=GenBank:WP_075671621.1;Name=WP_075671621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247536.1;locus_tag=L2557_RS01695;product=YehS family protein;protein_id=WP_075671621.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 9425 9667 . + . ID=gene-L2557_RS01700;Name=L2557_RS01700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01700 NZ_JAIKUA010000017.1 Protein Homology CDS 9425 9667 . + 0 ID=cds-WP_075671623.1;Parent=gene-L2557_RS01700;Dbxref=GenBank:WP_075671623.1;Name=WP_075671623.1;Ontology_term=GO:0051983;gbkey=CDS;go_process=regulation of chromosome segregation|0051983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002224342.1;locus_tag=L2557_RS01700;product=type II toxin-antitoxin system ParD family antitoxin;protein_id=WP_075671623.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 9660 9953 . + . ID=gene-L2557_RS01705;Name=L2557_RS01705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01705 NZ_JAIKUA010000017.1 Protein Homology CDS 9660 9953 . + 0 ID=cds-WP_075671625.1;Parent=gene-L2557_RS01705;Dbxref=GenBank:WP_075671625.1;Name=WP_075671625.1;Ontology_term=GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252213.1;locus_tag=L2557_RS01705;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_075671625.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 10322 10528 . + . ID=gene-L2557_RS01710;Name=L2557_RS01710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01710 NZ_JAIKUA010000017.1 Protein Homology CDS 10322 10528 . + 0 ID=cds-WP_036912074.1;Parent=gene-L2557_RS01710;Dbxref=GenBank:WP_036912074.1;Name=WP_036912074.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247539.1;locus_tag=L2557_RS01710;product=YbfA family protein;protein_id=WP_036912074.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 10751 11494 . + . ID=gene-L2557_RS01715;Name=L2557_RS01715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01715 NZ_JAIKUA010000017.1 Protein Homology CDS 10751 11494 . + 0 ID=cds-WP_075671627.1;Parent=gene-L2557_RS01715;Dbxref=GenBank:WP_075671627.1;Name=WP_075671627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005168004.1;locus_tag=L2557_RS01715;product=type 2 GTP cyclohydrolase I;protein_id=WP_075671627.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 11591 13663 . - . ID=gene-L2557_RS01720;Name=L2557_RS01720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01720 NZ_JAIKUA010000017.1 Protein Homology CDS 11591 13663 . - 0 ID=cds-WP_223673715.1;Parent=gene-L2557_RS01720;Dbxref=GenBank:WP_223673715.1;Name=WP_223673715.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827818.1;locus_tag=L2557_RS01720;product=SWIM zinc finger family protein;protein_id=WP_223673715.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 13660 14814 . - . ID=gene-L2557_RS01725;Name=L2557_RS01725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01725 NZ_JAIKUA010000017.1 Protein Homology CDS 13660 14814 . - 0 ID=cds-WP_235409746.1;Parent=gene-L2557_RS01725;Dbxref=GenBank:WP_235409746.1;Name=WP_235409746.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628479.1;locus_tag=L2557_RS01725;product=VWA domain-containing protein;protein_id=WP_235409746.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 14801 17383 . - . ID=gene-L2557_RS01730;Name=L2557_RS01730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01730 NZ_JAIKUA010000017.1 Protein Homology CDS 14801 17383 . - 0 ID=cds-WP_109420388.1;Parent=gene-L2557_RS01730;Dbxref=GenBank:WP_109420388.1;Name=WP_109420388.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827816.1;locus_tag=L2557_RS01730;product=DUF5682 family protein;protein_id=WP_109420388.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 17483 18592 . - . ID=gene-L2557_RS01735;Name=L2557_RS01735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01735 NZ_JAIKUA010000017.1 Protein Homology CDS 17483 18592 . - 0 ID=cds-WP_075671635.1;Parent=gene-L2557_RS01735;Dbxref=GenBank:WP_075671635.1;Name=WP_075671635.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367664.1;locus_tag=L2557_RS01735;product=ATP-binding protein;protein_id=WP_075671635.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 18618 22346 . - . ID=gene-L2557_RS01740;Name=L2557_RS01740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01740 NZ_JAIKUA010000017.1 Protein Homology CDS 18618 22346 . - 0 ID=cds-WP_235409747.1;Parent=gene-L2557_RS01740;Dbxref=GenBank:WP_235409747.1;Name=WP_235409747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244406.1;locus_tag=L2557_RS01740;product=DUF4132 domain-containing protein;protein_id=WP_235409747.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 22718 23848 . - . ID=gene-L2557_RS01745;Name=L2557_RS01745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01745 NZ_JAIKUA010000017.1 Protein Homology CDS 22718 23848 . - 0 ID=cds-WP_075671639.1;Parent=gene-L2557_RS01745;Dbxref=GenBank:WP_075671639.1;Name=WP_075671639.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247545.1;locus_tag=L2557_RS01745;product=multidrug effflux MFS transporter;protein_id=WP_075671639.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 23950 24711 . + . ID=gene-L2557_RS01750;Name=L2557_RS01750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01750 NZ_JAIKUA010000017.1 Protein Homology CDS 23950 24711 . + 0 ID=cds-WP_075671641.1;Parent=gene-L2557_RS01750;Dbxref=GenBank:WP_075671641.1;Name=WP_075671641.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247546.1;locus_tag=L2557_RS01750;product=AraC family transcriptional regulator;protein_id=WP_075671641.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 24792 26075 . - . ID=gene-L2557_RS01755;Name=L2557_RS01755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01755 NZ_JAIKUA010000017.1 Protein Homology CDS 24792 26075 . - 0 ID=cds-WP_075671643.1;Parent=gene-L2557_RS01755;Dbxref=GenBank:WP_075671643.1;Name=WP_075671643.1;Ontology_term=GO:0046912;gbkey=CDS;go_function=acyltransferase activity%2C acyl groups converted into alkyl on transfer|0046912||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013811919.1;locus_tag=L2557_RS01755;product=citrate synthase;protein_id=WP_075671643.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 26699 27079 . + . ID=gene-L2557_RS01760;Name=sdhC;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;gene_synonym=cybA,dhsC;locus_tag=L2557_RS01760 NZ_JAIKUA010000017.1 Protein Homology CDS 26699 27079 . + 0 ID=cds-WP_129586864.1;Parent=gene-L2557_RS01760;Dbxref=GenBank:WP_129586864.1;Name=WP_129586864.1;Ontology_term=GO:0006099,GO:0000104,GO:0009055,GO:0016020,GO:0045273;gbkey=CDS;gene=sdhC;go_component=membrane|0016020||IEA,respiratory chain complex II (succinate dehydrogenase)|0045273||IEA;go_function=succinate dehydrogenase activity|0000104||IEA,electron transfer activity|0009055||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006812775.1;locus_tag=L2557_RS01760;product=succinate dehydrogenase cytochrome b556 subunit;protein_id=WP_129586864.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 27073 27417 . + . ID=gene-L2557_RS01765;Name=sdhD;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;gene_synonym=cybS,dhsD;locus_tag=L2557_RS01765 NZ_JAIKUA010000017.1 Protein Homology CDS 27073 27417 . + 0 ID=cds-WP_006537664.1;Parent=gene-L2557_RS01765;Dbxref=GenBank:WP_006537664.1;Name=WP_006537664.1;gbkey=CDS;gene=sdhD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537664.1;locus_tag=L2557_RS01765;product=succinate dehydrogenase membrane anchor subunit;protein_id=WP_006537664.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 27417 29183 . + . ID=gene-L2557_RS01770;Name=sdhA;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=L2557_RS01770 NZ_JAIKUA010000017.1 Protein Homology CDS 27417 29183 . + 0 ID=cds-WP_023581183.1;Parent=gene-L2557_RS01770;Dbxref=GenBank:WP_023581183.1;Name=WP_023581183.1;Ontology_term=GO:0006099,GO:0016627,GO:0050660;gbkey=CDS;gene=sdhA;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459719.1;locus_tag=L2557_RS01770;product=succinate dehydrogenase flavoprotein subunit;protein_id=WP_023581183.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 29218 29934 . + . ID=gene-L2557_RS01775;Name=L2557_RS01775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01775 NZ_JAIKUA010000017.1 Protein Homology CDS 29218 29934 . + 0 ID=cds-WP_006537662.1;Parent=gene-L2557_RS01775;Dbxref=GenBank:WP_006537662.1;Name=WP_006537662.1;Ontology_term=GO:0008177,GO:0046872;gbkey=CDS;go_function=succinate dehydrogenase (quinone) activity|0008177||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133276.1;locus_tag=L2557_RS01775;product=succinate dehydrogenase iron-sulfur subunit;protein_id=WP_006537662.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 30180 32984 . + . ID=gene-L2557_RS01780;Name=sucA;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=L2557_RS01780 NZ_JAIKUA010000017.1 Protein Homology CDS 30180 32984 . + 0 ID=cds-WP_075671645.1;Parent=gene-L2557_RS01780;Dbxref=GenBank:WP_075671645.1;Name=WP_075671645.1;Ontology_term=GO:0006099,GO:0004591,GO:0030976,GO:0045252;gbkey=CDS;gene=sucA;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=oxoglutarate dehydrogenase (succinyl-transferring) activity|0004591||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004939884.1;locus_tag=L2557_RS01780;product=2-oxoglutarate dehydrogenase E1 component;protein_id=WP_075671645.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 32998 34203 . + . ID=gene-L2557_RS01785;Name=odhB;gbkey=Gene;gene=odhB;gene_biotype=protein_coding;locus_tag=L2557_RS01785 NZ_JAIKUA010000017.1 Protein Homology CDS 32998 34203 . + 0 ID=cds-WP_099659821.1;Parent=gene-L2557_RS01785;Dbxref=GenBank:WP_099659821.1;Name=WP_099659821.1;Ontology_term=GO:0006099,GO:0004149,GO:0045252;gbkey=CDS;gene=odhB;go_component=oxoglutarate dehydrogenase complex|0045252||IEA;go_function=dihydrolipoyllysine-residue succinyltransferase activity|0004149||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016941938.1;locus_tag=L2557_RS01785;product=2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase;protein_id=WP_099659821.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 34365 35531 . + . ID=gene-L2557_RS01790;Name=sucC;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=L2557_RS01790 NZ_JAIKUA010000017.1 Protein Homology CDS 34365 35531 . + 0 ID=cds-WP_075671649.1;Parent=gene-L2557_RS01790;Dbxref=GenBank:WP_075671649.1;Name=WP_075671649.1;Ontology_term=GO:0006099,GO:0003824,GO:0005524,GO:0046872;gbkey=CDS;gene=sucC;go_function=catalytic activity|0003824||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012133271.1;locus_tag=L2557_RS01790;product=ADP-forming succinate--CoA ligase subunit beta;protein_id=WP_075671649.1;transl_table=11 NZ_JAIKUA010000017.1 RefSeq gene 35531 36400 . + . ID=gene-L2557_RS01795;Name=sucD;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=L2557_RS01795 NZ_JAIKUA010000017.1 Protein Homology CDS 35531 36400 . + 0 ID=cds-WP_006537657.1;Parent=gene-L2557_RS01795;Dbxref=GenBank:WP_006537657.1;Name=WP_006537657.1;Ontology_term=GO:0003824;gbkey=CDS;gene=sucD;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459724.1;locus_tag=L2557_RS01795;product=succinate--CoA ligase subunit alpha;protein_id=WP_006537657.1;transl_table=11 ##sequence-region NZ_JAIKUA010000170.1 1 2292 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000170.1 RefSeq region 1 2292 . + . ID=NZ_JAIKUA010000170.1:1..2292;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000170.1 RefSeq gene 131 577 . - . ID=gene-L2557_RS11450;Name=rimI;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=L2557_RS11450 NZ_JAIKUA010000170.1 Protein Homology CDS 131 577 . - 0 ID=cds-WP_075672703.1;Parent=gene-L2557_RS11450;Dbxref=GenBank:WP_075672703.1;Name=WP_075672703.1;Ontology_term=GO:0006474,GO:0008080;gbkey=CDS;gene=rimI;go_function=N-acetyltransferase activity|0008080||IEA;go_process=N-terminal protein amino acid acetylation|0006474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245652.1;locus_tag=L2557_RS11450;product=ribosomal protein S18-alanine N-acetyltransferase;protein_id=WP_075672703.1;transl_table=11 NZ_JAIKUA010000170.1 RefSeq gene 546 956 . - . ID=gene-L2557_RS11455;Name=L2557_RS11455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11455 NZ_JAIKUA010000170.1 Protein Homology CDS 546 956 . - 0 ID=cds-WP_099660236.1;Parent=gene-L2557_RS11455;Dbxref=GenBank:WP_099660236.1;Name=WP_099660236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245653.1;locus_tag=L2557_RS11455;product=DNA polymerase III subunit psi;protein_id=WP_099660236.1;transl_table=11 NZ_JAIKUA010000170.1 RefSeq gene 1086 2102 . + . ID=gene-L2557_RS11460;Name=rsmC;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=L2557_RS11460 NZ_JAIKUA010000170.1 Protein Homology CDS 1086 2102 . + 0 ID=cds-WP_075672705.1;Parent=gene-L2557_RS11460;Dbxref=GenBank:WP_075672705.1;Name=WP_075672705.1;Ontology_term=GO:0006364,GO:0003676,GO:0008990;gbkey=CDS;gene=rsmC;go_function=nucleic acid binding|0003676||IEA,rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250184.1;locus_tag=L2557_RS11460;product=16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC;protein_id=WP_075672705.1;transl_table=11 ##sequence-region NZ_JAIKUA010000171.1 1 9345 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000171.1 RefSeq region 1 9345 . + . ID=NZ_JAIKUA010000171.1:1..9345;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000171.1 RefSeq pseudogene 1 240 . + . ID=gene-L2557_RS11465;Name=L2557_RS11465;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS11465;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000171.1 Protein Homology CDS 1 240 . + 0 ID=cds-L2557_RS11465;Parent=gene-L2557_RS11465;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249200.1;locus_tag=L2557_RS11465;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAIKUA010000171.1 RefSeq gene 292 546 . + . ID=gene-L2557_RS11470;Name=sctF;gbkey=Gene;gene=sctF;gene_biotype=protein_coding;locus_tag=L2557_RS11470 NZ_JAIKUA010000171.1 Protein Homology CDS 292 546 . + 0 ID=cds-WP_075673522.1;Parent=gene-L2557_RS11470;Dbxref=GenBank:WP_075673522.1;Name=WP_075673522.1;Ontology_term=GO:0030254,GO:0030257;gbkey=CDS;gene=sctF;go_component=type III protein secretion system complex|0030257||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628505.1;locus_tag=L2557_RS11470;product=type III secretion system needle filament subunit SctF;protein_id=WP_075673522.1;transl_table=11 NZ_JAIKUA010000171.1 RefSeq gene 570 854 . + . ID=gene-L2557_RS11475;Name=sctI;gbkey=Gene;gene=sctI;gene_biotype=protein_coding;locus_tag=L2557_RS11475 NZ_JAIKUA010000171.1 Protein Homology CDS 570 854 . + 0 ID=cds-WP_075673523.1;Parent=gene-L2557_RS11475;Dbxref=GenBank:WP_075673523.1;Name=WP_075673523.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctI;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827354.1;locus_tag=L2557_RS11475;product=type III secretion system inner rod subunit SctI;protein_id=WP_075673523.1;transl_table=11 NZ_JAIKUA010000171.1 RefSeq gene 857 1618 . + . ID=gene-L2557_RS11480;Name=sctJ;gbkey=Gene;gene=sctJ;gene_biotype=protein_coding;locus_tag=L2557_RS11480 NZ_JAIKUA010000171.1 Protein Homology CDS 857 1618 . + 0 ID=cds-WP_075673524.1;Parent=gene-L2557_RS11480;Dbxref=GenBank:WP_075673524.1;Name=WP_075673524.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctJ;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628504.1;locus_tag=L2557_RS11480;product=type III secretion system inner membrane ring lipoprotein SctJ;protein_id=WP_075673524.1;transl_table=11 NZ_JAIKUA010000171.1 RefSeq gene 1599 2162 . + . ID=gene-L2557_RS11485;Name=L2557_RS11485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11485 NZ_JAIKUA010000171.1 Protein Homology CDS 1599 2162 . + 0 ID=cds-WP_075673525.1;Parent=gene-L2557_RS11485;Dbxref=GenBank:WP_075673525.1;Name=WP_075673525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827353.1;locus_tag=L2557_RS11485;product=type III secretion protein;protein_id=WP_075673525.1;transl_table=11 NZ_JAIKUA010000171.1 RefSeq gene 2143 2838 . + . ID=gene-L2557_RS11490;Name=L2557_RS11490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11490 NZ_JAIKUA010000171.1 Protein Homology CDS 2143 2838 . + 0 ID=cds-WP_075673526.1;Parent=gene-L2557_RS11490;Dbxref=GenBank:WP_075673526.1;Name=WP_075673526.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628502.1;locus_tag=L2557_RS11490;product=type III secretion protein;protein_id=WP_075673526.1;transl_table=11 NZ_JAIKUA010000171.1 RefSeq gene 2822 3259 . + . ID=gene-L2557_RS11495;Name=L2557_RS11495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11495 NZ_JAIKUA010000171.1 Protein Homology CDS 2822 3259 . + 0 ID=cds-WP_223672854.1;Parent=gene-L2557_RS11495;Dbxref=GenBank:WP_223672854.1;Name=WP_223672854.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245850.1;locus_tag=L2557_RS11495;product=hypothetical protein;protein_id=WP_223672854.1;transl_table=11 NZ_JAIKUA010000171.1 RefSeq gene 3266 3715 . - . ID=gene-L2557_RS11500;Name=soxR;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=L2557_RS11500 NZ_JAIKUA010000171.1 Protein Homology CDS 3266 3715 . - 0 ID=cds-WP_075673527.1;Parent=gene-L2557_RS11500;Dbxref=GenBank:WP_075673527.1;Name=WP_075673527.1;Ontology_term=GO:0006355,GO:0006979,GO:0003700,GO:0051537;gbkey=CDS;gene=soxR;go_function=DNA-binding transcription factor activity|0003700||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245851.1;locus_tag=L2557_RS11500;product=redox-sensitive transcriptional activator SoxR;protein_id=WP_075673527.1;transl_table=11 NZ_JAIKUA010000171.1 RefSeq gene 3833 4255 . + . ID=gene-L2557_RS11505;Name=L2557_RS11505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11505 NZ_JAIKUA010000171.1 Protein Homology CDS 3833 4255 . + 0 ID=cds-WP_075673528.1;Parent=gene-L2557_RS11505;Dbxref=GenBank:WP_075673528.1;Name=WP_075673528.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245852.1;locus_tag=L2557_RS11505;product=DoxX family protein;protein_id=WP_075673528.1;transl_table=11 NZ_JAIKUA010000171.1 RefSeq gene 4301 5404 . + . ID=gene-L2557_RS11510;Name=L2557_RS11510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11510 NZ_JAIKUA010000171.1 Protein Homology CDS 4301 5404 . + 0 ID=cds-WP_075673529.1;Parent=gene-L2557_RS11510;Dbxref=GenBank:WP_075673529.1;Name=WP_075673529.1;Ontology_term=GO:0055085,GO:0022857,GO:0042802,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,identical protein binding|0042802||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249194.1;locus_tag=L2557_RS11510;product=efflux RND transporter periplasmic adaptor subunit;protein_id=WP_075673529.1;transl_table=11 NZ_JAIKUA010000171.1 RefSeq gene 5417 8494 . + . ID=gene-L2557_RS11515;Name=L2557_RS11515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11515 NZ_JAIKUA010000171.1 Protein Homology CDS 5417 8494 . + 0 ID=cds-WP_223673899.1;Parent=gene-L2557_RS11515;Dbxref=GenBank:WP_223673899.1;Name=WP_223673899.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008484340.1;locus_tag=L2557_RS11515;product=MexW/MexI family multidrug efflux RND transporter permease subunit;protein_id=WP_223673899.1;transl_table=11 NZ_JAIKUA010000171.1 RefSeq gene 8676 9050 . + . ID=gene-L2557_RS11520;Name=L2557_RS11520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11520 NZ_JAIKUA010000171.1 Protein Homology CDS 8676 9050 . + 0 ID=cds-WP_075673531.1;Parent=gene-L2557_RS11520;Dbxref=GenBank:WP_075673531.1;Name=WP_075673531.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008455119.1;locus_tag=L2557_RS11520;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_075673531.1;transl_table=11 NZ_JAIKUA010000171.1 RefSeq gene 9022 9321 . + . ID=gene-L2557_RS11525;Name=L2557_RS11525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11525 NZ_JAIKUA010000171.1 Protein Homology CDS 9022 9321 . + 0 ID=cds-WP_235410053.1;Parent=gene-L2557_RS11525;Dbxref=GenBank:WP_235410053.1;Name=WP_235410053.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013183829.1;locus_tag=L2557_RS11525;product=helix-turn-helix domain-containing protein;protein_id=WP_235410053.1;transl_table=11 ##sequence-region NZ_JAIKUA010000172.1 1 5585 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000172.1 RefSeq region 1 5585 . + . ID=NZ_JAIKUA010000172.1:1..5585;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000172.1 RefSeq gene 133 690 . + . ID=gene-L2557_RS11530;Name=hydN;gbkey=Gene;gene=hydN;gene_biotype=protein_coding;locus_tag=L2557_RS11530 NZ_JAIKUA010000172.1 Protein Homology CDS 133 690 . + 0 ID=cds-WP_069368213.1;Parent=gene-L2557_RS11530;Dbxref=GenBank:WP_069368213.1;Name=WP_069368213.1;gbkey=CDS;gene=hydN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006178177.1;locus_tag=L2557_RS11530;product=electron transport protein HydN;protein_id=WP_069368213.1;transl_table=11 NZ_JAIKUA010000172.1 RefSeq gene 763 1104 . + . ID=gene-L2557_RS11535;Name=hypA;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=L2557_RS11535 NZ_JAIKUA010000172.1 Protein Homology CDS 763 1104 . + 0 ID=cds-WP_075672946.1;Parent=gene-L2557_RS11535;Dbxref=GenBank:WP_075672946.1;Name=WP_075672946.1;Ontology_term=GO:0036211,GO:0008901,GO:0016151;gbkey=CDS;gene=hypA;go_function=ferredoxin hydrogenase activity|0008901||IEA,nickel cation binding|0016151||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535441.1;locus_tag=L2557_RS11535;product=hydrogenase maturation nickel metallochaperone HypA;protein_id=WP_075672946.1;transl_table=11 NZ_JAIKUA010000172.1 RefSeq gene 1113 1403 . + . ID=gene-L2557_RS11540;Name=hybG;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=L2557_RS11540 NZ_JAIKUA010000172.1 Protein Homology CDS 1113 1403 . + 0 ID=cds-WP_036933156.1;Parent=gene-L2557_RS11540;Dbxref=GenBank:WP_036933156.1;Name=WP_036933156.1;gbkey=CDS;gene=hybG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535440.1;locus_tag=L2557_RS11540;product=hydrogenase maturation factor HybG;protein_id=WP_036933156.1;transl_table=11 NZ_JAIKUA010000172.1 RefSeq gene 1535 1849 . + . ID=gene-L2557_RS11545;Name=sugE;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=L2557_RS11545 NZ_JAIKUA010000172.1 Protein Homology CDS 1535 1849 . + 0 ID=cds-WP_069368216.1;Parent=gene-L2557_RS11545;Dbxref=GenBank:WP_069368216.1;Name=WP_069368216.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;gene=sugE;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245413.1;locus_tag=L2557_RS11545;product=quaternary ammonium compound efflux SMR transporter SugE;protein_id=WP_069368216.1;transl_table=11 NZ_JAIKUA010000172.1 RefSeq gene 1915 2274 . - . ID=gene-L2557_RS11550;Name=frdD;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=L2557_RS11550 NZ_JAIKUA010000172.1 Protein Homology CDS 1915 2274 . - 0 ID=cds-WP_006535438.1;Parent=gene-L2557_RS11550;Dbxref=GenBank:WP_006535438.1;Name=WP_006535438.1;gbkey=CDS;gene=frdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535438.1;locus_tag=L2557_RS11550;product=fumarate reductase subunit FrdD;protein_id=WP_006535438.1;transl_table=11 NZ_JAIKUA010000172.1 RefSeq gene 2289 2681 . - . ID=gene-L2557_RS11555;Name=frdC;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=L2557_RS11555 NZ_JAIKUA010000172.1 Protein Homology CDS 2289 2681 . - 0 ID=cds-WP_075672947.1;Parent=gene-L2557_RS11555;Dbxref=GenBank:WP_075672947.1;Name=WP_075672947.1;Ontology_term=GO:0016020;gbkey=CDS;gene=frdC;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005156465.1;locus_tag=L2557_RS11555;product=fumarate reductase subunit FrdC;protein_id=WP_075672947.1;transl_table=11 NZ_JAIKUA010000172.1 RefSeq gene 2696 3433 . - . ID=gene-L2557_RS11560;Name=L2557_RS11560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11560 NZ_JAIKUA010000172.1 Protein Homology CDS 2696 3433 . - 0 ID=cds-WP_075672948.1;Parent=gene-L2557_RS11560;Dbxref=GenBank:WP_075672948.1;Name=WP_075672948.1;Ontology_term=GO:0006099,GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248868.1;locus_tag=L2557_RS11560;product=succinate dehydrogenase/fumarate reductase iron-sulfur subunit;protein_id=WP_075672948.1;transl_table=11 NZ_JAIKUA010000172.1 RefSeq gene 3426 5222 . - . ID=gene-L2557_RS11565;Name=frdA;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=L2557_RS11565 NZ_JAIKUA010000172.1 Protein Homology CDS 3426 5222 . - 0 ID=cds-WP_075672949.1;Parent=gene-L2557_RS11565;Dbxref=GenBank:WP_075672949.1;Name=WP_075672949.1;Ontology_term=GO:0009061,GO:0022900,GO:0016491,GO:0050660;gbkey=CDS;gene=frdA;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=anaerobic respiration|0009061||IEA,electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891352.1;locus_tag=L2557_RS11565;product=fumarate reductase (quinol) flavoprotein subunit;protein_id=WP_075672949.1;transl_table=11 ##sequence-region NZ_JAIKUA010000173.1 1 17490 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000173.1 RefSeq region 1 17490 . + . ID=NZ_JAIKUA010000173.1:1..17490;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000173.1 RefSeq gene 66 689 . - . ID=gene-L2557_RS11570;Name=dsbA;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=L2557_RS11570 NZ_JAIKUA010000173.1 Protein Homology CDS 66 689 . - 0 ID=cds-WP_075673330.1;Parent=gene-L2557_RS11570;Dbxref=GenBank:WP_075673330.1;Name=WP_075673330.1;Ontology_term=GO:0016491;gbkey=CDS;gene=dsbA;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080347.1;locus_tag=L2557_RS11570;product=thiol:disulfide interchange protein DsbA;protein_id=WP_075673330.1;transl_table=11 NZ_JAIKUA010000173.1 RefSeq gene 710 1705 . - . ID=gene-L2557_RS11575;Name=L2557_RS11575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11575 NZ_JAIKUA010000173.1 Protein Homology CDS 710 1705 . - 0 ID=cds-WP_075673331.1;Parent=gene-L2557_RS11575;Dbxref=GenBank:WP_075673331.1;Name=WP_075673331.1;Ontology_term=GO:0006468,GO:0004674;gbkey=CDS;go_function=protein serine/threonine kinase activity|0004674||IEA;go_process=protein phosphorylation|0006468||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250072.1;locus_tag=L2557_RS11575;product=serine/threonine protein kinase;protein_id=WP_075673331.1;transl_table=11 NZ_JAIKUA010000173.1 RefSeq gene 1720 1989 . - . ID=gene-L2557_RS11580;Name=L2557_RS11580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11580 NZ_JAIKUA010000173.1 Protein Homology CDS 1720 1989 . - 0 ID=cds-WP_075673332.1;Parent=gene-L2557_RS11580;Dbxref=GenBank:WP_075673332.1;Name=WP_075673332.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005191202.1;locus_tag=L2557_RS11580;product=YihD family protein;protein_id=WP_075673332.1;transl_table=11 NZ_JAIKUA010000173.1 RefSeq gene 2210 2794 . + . ID=gene-L2557_RS11585;Name=mobA;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=L2557_RS11585 NZ_JAIKUA010000173.1 Protein Homology CDS 2210 2794 . + 0 ID=cds-WP_235410054.1;Parent=gene-L2557_RS11585;Dbxref=GenBank:WP_235410054.1;Name=WP_235410054.1;Ontology_term=GO:0006777,GO:0003824;gbkey=CDS;gene=mobA;go_function=catalytic activity|0003824||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246859.1;locus_tag=L2557_RS11585;product=molybdenum cofactor guanylyltransferase MobA;protein_id=WP_235410054.1;transl_table=11 NZ_JAIKUA010000173.1 RefSeq gene 2806 3324 . + . ID=gene-L2557_RS11590;Name=mobB;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=L2557_RS11590 NZ_JAIKUA010000173.1 Protein Homology CDS 2806 3324 . + 0 ID=cds-WP_075673334.1;Parent=gene-L2557_RS11590;Dbxref=GenBank:WP_075673334.1;Name=WP_075673334.1;Ontology_term=GO:0006777,GO:0005525;gbkey=CDS;gene=mobB;go_function=GTP binding|0005525||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246857.1;locus_tag=L2557_RS11590;product=molybdopterin-guanine dinucleotide biosynthesis protein MobB;protein_id=WP_075673334.1;transl_table=11 NZ_JAIKUA010000173.1 RefSeq gene 3384 5042 . - . ID=gene-L2557_RS11595;Name=L2557_RS11595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11595 NZ_JAIKUA010000173.1 Protein Homology CDS 3384 5042 . - 0 ID=cds-WP_099659194.1;Parent=gene-L2557_RS11595;Dbxref=GenBank:WP_099659194.1;Name=WP_099659194.1;Ontology_term=GO:0005975,GO:0009311,GO:0004553,GO:0004556,GO:0004574;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,alpha-amylase activity|0004556||IEA,oligo-1%2C6-glucosidase activity|0004574||IEA;go_process=carbohydrate metabolic process|0005975||IEA,oligosaccharide metabolic process|0009311||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814406.1;locus_tag=L2557_RS11595;product=glycoside hydrolase family 13 protein;protein_id=WP_099659194.1;transl_table=11 NZ_JAIKUA010000173.1 RefSeq gene 5258 6238 . + . ID=gene-L2557_RS11600;Name=L2557_RS11600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11600 NZ_JAIKUA010000173.1 Protein Homology CDS 5258 6238 . + 0 ID=cds-WP_075673336.1;Parent=gene-L2557_RS11600;Dbxref=GenBank:WP_075673336.1;Name=WP_075673336.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF012742.6;locus_tag=L2557_RS11600;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_075673336.1;transl_table=11 NZ_JAIKUA010000173.1 RefSeq gene 6470 6964 . - . ID=gene-L2557_RS11605;Name=L2557_RS11605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11605 NZ_JAIKUA010000173.1 Protein Homology CDS 6470 6964 . - 0 ID=cds-WP_069369589.1;Parent=gene-L2557_RS11605;Dbxref=GenBank:WP_069369589.1;Name=WP_069369589.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249104.1;locus_tag=L2557_RS11605;product=RidA family protein;protein_id=WP_069369589.1;transl_table=11 NZ_JAIKUA010000173.1 RefSeq gene 7010 8431 . - . ID=gene-L2557_RS11610;Name=L2557_RS11610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11610 NZ_JAIKUA010000173.1 Protein Homology CDS 7010 8431 . - 0 ID=cds-WP_075673337.1;Parent=gene-L2557_RS11610;Dbxref=GenBank:WP_075673337.1;Name=WP_075673337.1;Ontology_term=GO:0016491,GO:0050660;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246855.1;locus_tag=L2557_RS11610;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_075673337.1;transl_table=11 NZ_JAIKUA010000173.1 RefSeq gene 9044 10399 . - . ID=gene-L2557_RS11615;Name=gorA;gbkey=Gene;gene=gorA;gene_biotype=protein_coding;locus_tag=L2557_RS11615 NZ_JAIKUA010000173.1 Protein Homology CDS 9044 10399 . - 0 ID=cds-WP_235410055.1;Parent=gene-L2557_RS11615;Dbxref=GenBank:WP_235410055.1;Name=WP_235410055.1;Ontology_term=GO:0006749,GO:0045454,GO:0004362,GO:0050660,GO:0050661;gbkey=CDS;gene=gorA;go_function=glutathione-disulfide reductase (NADPH) activity|0004362||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=glutathione metabolic process|0006749||IEA,cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861215.1;locus_tag=L2557_RS11615;product=glutathione-disulfide reductase;protein_id=WP_235410055.1;transl_table=11 NZ_JAIKUA010000173.1 RefSeq gene 10544 11386 . - . ID=gene-L2557_RS11620;Name=L2557_RS11620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11620 NZ_JAIKUA010000173.1 Protein Homology CDS 10544 11386 . - 0 ID=cds-WP_235410056.1;Parent=gene-L2557_RS11620;Dbxref=GenBank:WP_235410056.1;Name=WP_235410056.1;Ontology_term=GO:0015976,GO:0070475,GO:0003723,GO:0008988,GO:1904047;gbkey=CDS;go_function=RNA binding|0003723||IEA,rRNA (adenine-N6-)-methyltransferase activity|0008988||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=carbon utilization|0015976||IEA,rRNA base methylation|0070475||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462497.1;locus_tag=L2557_RS11620;product=23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ;protein_id=WP_235410056.1;transl_table=11 NZ_JAIKUA010000173.1 RefSeq gene 11567 11956 . + . ID=gene-L2557_RS11625;Name=L2557_RS11625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11625 NZ_JAIKUA010000173.1 Protein Homology CDS 11567 11956 . + 0 ID=cds-WP_075673344.1;Parent=gene-L2557_RS11625;Dbxref=GenBank:WP_075673344.1;Name=WP_075673344.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534635.1;locus_tag=L2557_RS11625;product=DUF1090 domain-containing protein;protein_id=WP_075673344.1;transl_table=11 NZ_JAIKUA010000173.1 RefSeq gene 12287 13306 . + . ID=gene-L2557_RS11630;Name=yhjD;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=L2557_RS11630 NZ_JAIKUA010000173.1 Protein Homology CDS 12287 13306 . + 0 ID=cds-WP_099659195.1;Parent=gene-L2557_RS11630;Dbxref=GenBank:WP_099659195.1;Name=WP_099659195.1;gbkey=CDS;gene=yhjD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534634.1;locus_tag=L2557_RS11630;product=inner membrane protein YhjD;protein_id=WP_099659195.1;transl_table=11 NZ_JAIKUA010000173.1 RefSeq gene 13376 13585 . + . ID=gene-L2557_RS11635;Name=L2557_RS11635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11635 NZ_JAIKUA010000173.1 Protein Homology CDS 13376 13585 . + 0 ID=cds-WP_075673346.1;Parent=gene-L2557_RS11635;Dbxref=GenBank:WP_075673346.1;Name=WP_075673346.1;Ontology_term=GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534633.1;locus_tag=L2557_RS11635;product=2-hydroxymuconate tautomerase family protein;protein_id=WP_075673346.1;transl_table=11 NZ_JAIKUA010000173.1 RefSeq gene 13666 14676 . + . ID=gene-L2557_RS11640;Name=L2557_RS11640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11640 NZ_JAIKUA010000173.1 Protein Homology CDS 13666 14676 . + 0 ID=cds-WP_075673347.1;Parent=gene-L2557_RS11640;Dbxref=GenBank:WP_075673347.1;Name=WP_075673347.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: protein motif:HMM:NF012371.6;locus_tag=L2557_RS11640;product=serine hydrolase domain-containing protein;protein_id=WP_075673347.1;transl_table=11 NZ_JAIKUA010000173.1 RefSeq gene 14835 16313 . - . ID=gene-L2557_RS11645;Name=L2557_RS11645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11645 NZ_JAIKUA010000173.1 Protein Homology CDS 14835 16313 . - 0 ID=cds-WP_235410057.1;Parent=gene-L2557_RS11645;Dbxref=GenBank:WP_235410057.1;Name=WP_235410057.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011144703.1;locus_tag=L2557_RS11645;product=insulinase family protein;protein_id=WP_235410057.1;transl_table=11 NZ_JAIKUA010000173.1 RefSeq gene 16500 17210 . - . ID=gene-L2557_RS11650;Name=L2557_RS11650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11650 NZ_JAIKUA010000173.1 Protein Homology CDS 16500 17210 . - 0 ID=cds-WP_075673350.1;Parent=gene-L2557_RS11650;Dbxref=GenBank:WP_075673350.1;Name=WP_075673350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012776429.1;locus_tag=L2557_RS11650;product=HAMP domain-containing protein;protein_id=WP_075673350.1;transl_table=11 ##sequence-region NZ_JAIKUA010000174.1 1 4752 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000174.1 RefSeq region 1 4752 . + . ID=NZ_JAIKUA010000174.1:1..4752;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000174.1 RefSeq gene 310 630 . - . ID=gene-L2557_RS11655;Name=L2557_RS11655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11655 NZ_JAIKUA010000174.1 Protein Homology CDS 310 630 . - 0 ID=cds-WP_075673424.1;Parent=gene-L2557_RS11655;Dbxref=GenBank:WP_075673424.1;Name=WP_075673424.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244929.1;locus_tag=L2557_RS11655;product=helix-turn-helix domain-containing protein;protein_id=WP_075673424.1;transl_table=11 NZ_JAIKUA010000174.1 RefSeq gene 652 1479 . - . ID=gene-L2557_RS11660;Name=L2557_RS11660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11660 NZ_JAIKUA010000174.1 Protein Homology CDS 652 1479 . - 0 ID=cds-WP_075673423.1;Parent=gene-L2557_RS11660;Dbxref=GenBank:WP_075673423.1;Name=WP_075673423.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252447.1;locus_tag=L2557_RS11660;product=MrpH family fimbial adhesin;protein_id=WP_075673423.1;transl_table=11 NZ_JAIKUA010000174.1 RefSeq gene 1501 2049 . - . ID=gene-L2557_RS11665;Name=L2557_RS11665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11665 NZ_JAIKUA010000174.1 Protein Homology CDS 1501 2049 . - 0 ID=cds-WP_075673422.1;Parent=gene-L2557_RS11665;Dbxref=GenBank:WP_075673422.1;Name=WP_075673422.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827386.1;locus_tag=L2557_RS11665;product=fimbrial protein;protein_id=WP_075673422.1;transl_table=11 NZ_JAIKUA010000174.1 RefSeq gene 2060 2545 . - . ID=gene-L2557_RS11670;Name=L2557_RS11670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11670 NZ_JAIKUA010000174.1 Protein Homology CDS 2060 2545 . - 0 ID=cds-WP_075673421.1;Parent=gene-L2557_RS11670;Dbxref=GenBank:WP_075673421.1;Name=WP_075673421.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244922.1;locus_tag=L2557_RS11670;product=fimbrial protein;protein_id=WP_075673421.1;transl_table=11 NZ_JAIKUA010000174.1 RefSeq gene 2557 3102 . - . ID=gene-L2557_RS11675;Name=L2557_RS11675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11675 NZ_JAIKUA010000174.1 Protein Homology CDS 2557 3102 . - 0 ID=cds-WP_075673420.1;Parent=gene-L2557_RS11675;Dbxref=GenBank:WP_075673420.1;Name=WP_075673420.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244923.1;locus_tag=L2557_RS11675;product=fimbrial protein;protein_id=WP_075673420.1;transl_table=11 NZ_JAIKUA010000174.1 RefSeq gene 3116 3874 . - . ID=gene-L2557_RS11680;Name=L2557_RS11680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11680 NZ_JAIKUA010000174.1 Protein Homology CDS 3116 3874 . - 0 ID=cds-WP_075673419.1;Parent=gene-L2557_RS11680;Dbxref=GenBank:WP_075673419.1;Name=WP_075673419.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_136216120.1;locus_tag=L2557_RS11680;product=fimbria/pilus periplasmic chaperone;protein_id=WP_075673419.1;transl_table=11 NZ_JAIKUA010000174.1 RefSeq gene 3930 4752 . - . ID=gene-L2557_RS11685;Name=L2557_RS11685;end_range=4752,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11685;partial=true NZ_JAIKUA010000174.1 Protein Homology CDS 3930 4752 . - 1 ID=cds-WP_235410058.1;Parent=gene-L2557_RS11685;Dbxref=GenBank:WP_235410058.1;Name=WP_235410058.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;end_range=4752,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247320.1;locus_tag=L2557_RS11685;partial=true;product=fimbria/pilus outer membrane usher protein;protein_id=WP_235410058.1;transl_table=11 ##sequence-region NZ_JAIKUA010000175.1 1 13689 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000175.1 RefSeq region 1 13689 . + . ID=NZ_JAIKUA010000175.1:1..13689;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000175.1 RefSeq gene 180 1838 . + . ID=gene-L2557_RS11690;Name=glpA;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=L2557_RS11690 NZ_JAIKUA010000175.1 Protein Homology CDS 180 1838 . + 0 ID=cds-WP_171455253.1;Parent=gene-L2557_RS11690;Dbxref=GenBank:WP_171455253.1;Name=WP_171455253.1;Ontology_term=GO:0006072,GO:0046174,GO:0004368,GO:0010181,GO:0050660,GO:0009331;gbkey=CDS;gene=glpA;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA,polyol catabolic process|0046174||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252775.1;locus_tag=L2557_RS11690;product=anaerobic glycerol-3-phosphate dehydrogenase subunit A;protein_id=WP_171455253.1;transl_table=11 NZ_JAIKUA010000175.1 RefSeq gene 1828 3135 . + . ID=gene-L2557_RS11695;Name=glpB;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=L2557_RS11695 NZ_JAIKUA010000175.1 Protein Homology CDS 1828 3135 . + 0 ID=cds-WP_099660033.1;Parent=gene-L2557_RS11695;Dbxref=GenBank:WP_099660033.1;Name=WP_099660033.1;gbkey=CDS;gene=glpB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535424.1;locus_tag=L2557_RS11695;product=glycerol-3-phosphate dehydrogenase subunit GlpB;protein_id=WP_099660033.1;transl_table=11 NZ_JAIKUA010000175.1 RefSeq gene 3132 4325 . + . ID=gene-L2557_RS11700;Name=glpC;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=L2557_RS11700 NZ_JAIKUA010000175.1 Protein Homology CDS 3132 4325 . + 0 ID=cds-WP_023583709.1;Parent=gene-L2557_RS11700;Dbxref=GenBank:WP_023583709.1;Name=WP_023583709.1;Ontology_term=GO:0006071,GO:0009061,GO:0004368,GO:0051536,GO:0009331,GO:0016020;gbkey=CDS;gene=glpC;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA,membrane|0016020||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=glycerol metabolic process|0006071||IEA,anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245402.1;locus_tag=L2557_RS11700;product=anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC;protein_id=WP_023583709.1;transl_table=11 NZ_JAIKUA010000175.1 RefSeq gene 4507 5652 . - . ID=gene-L2557_RS11705;Name=L2557_RS11705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11705 NZ_JAIKUA010000175.1 Protein Homology CDS 4507 5652 . - 0 ID=cds-WP_159241760.1;Parent=gene-L2557_RS11705;Dbxref=GenBank:WP_159241760.1;Name=WP_159241760.1;Ontology_term=GO:0009401;gbkey=CDS;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: protein motif:HMM:NF015567.6;locus_tag=L2557_RS11705;product=phosphoenolpyruvate-utilizing N-terminal domain-containing protein;protein_id=WP_159241760.1;transl_table=11 NZ_JAIKUA010000175.1 RefSeq gene 5712 6815 . - . ID=gene-L2557_RS11710;Name=L2557_RS11710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11710 NZ_JAIKUA010000175.1 Protein Homology CDS 5712 6815 . - 0 ID=cds-WP_075672959.1;Parent=gene-L2557_RS11710;Dbxref=GenBank:WP_075672959.1;Name=WP_075672959.1;Ontology_term=GO:0008270,GO:0008888,GO:0030554;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,glycerol dehydrogenase (NAD+) activity|0008888||IEA,adenyl nucleotide binding|0030554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535420.1;locus_tag=L2557_RS11710;product=glycerol dehydrogenase;protein_id=WP_075672959.1;transl_table=11 NZ_JAIKUA010000175.1 RefSeq gene 7181 7855 . - . ID=gene-L2557_RS11715;Name=L2557_RS11715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11715 NZ_JAIKUA010000175.1 Protein Homology CDS 7181 7855 . - 0 ID=cds-WP_099660032.1;Parent=gene-L2557_RS11715;Dbxref=GenBank:WP_099660032.1;Name=WP_099660032.1;Ontology_term=GO:0160254;gbkey=CDS;go_process=tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors|0160254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245400.1;locus_tag=L2557_RS11715;product=7-cyano-7-deazaguanine/7-aminomethyl-7-deazaguanine transporter;protein_id=WP_099660032.1;transl_table=11 NZ_JAIKUA010000175.1 RefSeq gene 8061 8315 . + . ID=gene-L2557_RS11720;Name=tusA;gbkey=Gene;gene=tusA;gene_biotype=protein_coding;locus_tag=L2557_RS11720 NZ_JAIKUA010000175.1 Protein Homology CDS 8061 8315 . + 0 ID=cds-WP_036933135.1;Parent=gene-L2557_RS11720;Dbxref=GenBank:WP_036933135.1;Name=WP_036933135.1;Ontology_term=GO:0002143,GO:0097163;gbkey=CDS;gene=tusA;go_function=sulfur carrier activity|0097163||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245397.1;locus_tag=L2557_RS11720;product=sulfurtransferase TusA;protein_id=WP_036933135.1;transl_table=11 NZ_JAIKUA010000175.1 RefSeq gene 8403 10793 . - . ID=gene-L2557_RS11725;Name=L2557_RS11725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11725 NZ_JAIKUA010000175.1 Protein Homology CDS 8403 10793 . - 0 ID=cds-WP_099660031.1;Parent=gene-L2557_RS11725;Dbxref=GenBank:WP_099660031.1;Name=WP_099660031.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252752.1;locus_tag=L2557_RS11725;product=zinc/cadmium/mercury/lead-transporting ATPase;protein_id=WP_099660031.1;transl_table=11 NZ_JAIKUA010000175.1 RefSeq gene 10974 11600 . - . ID=gene-L2557_RS11730;Name=L2557_RS11730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11730 NZ_JAIKUA010000175.1 Protein Homology CDS 10974 11600 . - 0 ID=cds-WP_235410059.1;Parent=gene-L2557_RS11730;Dbxref=GenBank:WP_235410059.1;Name=WP_235410059.1;Ontology_term=GO:0006629,GO:0016787,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=hydrolase activity|0016787||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535415.1;locus_tag=L2557_RS11730;product=lysoplasmalogenase;protein_id=WP_235410059.1;transl_table=11 NZ_JAIKUA010000175.1 RefSeq gene 11748 12134 . + . ID=gene-L2557_RS11735;Name=L2557_RS11735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11735 NZ_JAIKUA010000175.1 Protein Homology CDS 11748 12134 . + 0 ID=cds-WP_180273011.1;Parent=gene-L2557_RS11735;Dbxref=GenBank:WP_180273011.1;Name=WP_180273011.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535414.1;locus_tag=L2557_RS11735;product=DUF2500 domain-containing protein;protein_id=WP_180273011.1;transl_table=11 NZ_JAIKUA010000175.1 RefSeq gene 12209 12511 . - . ID=gene-L2557_RS11740;Name=L2557_RS11740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11740 NZ_JAIKUA010000175.1 Protein Homology CDS 12209 12511 . - 0 ID=cds-WP_075672964.1;Parent=gene-L2557_RS11740;Dbxref=GenBank:WP_075672964.1;Name=WP_075672964.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248877.1;locus_tag=L2557_RS11740;product=DUF1145 family protein;protein_id=WP_075672964.1;transl_table=11 NZ_JAIKUA010000175.1 RefSeq gene 12529 13113 . - . ID=gene-L2557_RS11745;Name=rsmD;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=L2557_RS11745 NZ_JAIKUA010000175.1 Protein Homology CDS 12529 13113 . - 0 ID=cds-WP_075672965.1;Parent=gene-L2557_RS11745;Dbxref=GenBank:WP_075672965.1;Name=WP_075672965.1;Ontology_term=GO:0031167,GO:0003676,GO:0008168;gbkey=CDS;gene=rsmD;go_function=nucleic acid binding|0003676||IEA,methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628208.1;locus_tag=L2557_RS11745;product=16S rRNA (guanine(966)-N(2))-methyltransferase;protein_id=WP_075672965.1;transl_table=11 NZ_JAIKUA010000175.1 RefSeq pseudogene 13342 13689 . + . ID=gene-L2557_RS11750;Name=L2557_RS11750;end_range=13689,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS11750;partial=true;pseudo=true NZ_JAIKUA010000175.1 Protein Homology CDS 13342 13689 . + 0 ID=cds-L2557_RS11750;Parent=gene-L2557_RS11750;Note=cell division protein%3B signal recognition protein receptor%3B functions in the targeting and insertion of membrane proteins%3B incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=13689,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535411.1;locus_tag=L2557_RS11750;partial=true;product=signal recognition particle-docking protein FtsY;pseudo=true;transl_table=11 ##sequence-region NZ_JAIKUA010000176.1 1 12387 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000176.1 RefSeq region 1 12387 . + . ID=NZ_JAIKUA010000176.1:1..12387;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000176.1 RefSeq gene 125 877 . - . ID=gene-L2557_RS11755;Name=L2557_RS11755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11755 NZ_JAIKUA010000176.1 Protein Homology CDS 125 877 . - 0 ID=cds-WP_075670694.1;Parent=gene-L2557_RS11755;Dbxref=GenBank:WP_075670694.1;Name=WP_075670694.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248416.1;locus_tag=L2557_RS11755;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_075670694.1;transl_table=11 NZ_JAIKUA010000176.1 RefSeq gene 1061 1501 . + . ID=gene-L2557_RS11760;Name=L2557_RS11760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11760 NZ_JAIKUA010000176.1 Protein Homology CDS 1061 1501 . + 0 ID=cds-WP_235410060.1;Parent=gene-L2557_RS11760;Dbxref=GenBank:WP_235410060.1;Name=WP_235410060.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248417.1;locus_tag=L2557_RS11760;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_235410060.1;transl_table=11 NZ_JAIKUA010000176.1 RefSeq gene 1504 1719 . - . ID=gene-L2557_RS11765;Name=L2557_RS11765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11765 NZ_JAIKUA010000176.1 Protein Homology CDS 1504 1719 . - 0 ID=cds-WP_023581656.1;Parent=gene-L2557_RS11765;Dbxref=GenBank:WP_023581656.1;Name=WP_023581656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243788.1;locus_tag=L2557_RS11765;product=DUF3820 family protein;protein_id=WP_023581656.1;transl_table=11 NZ_JAIKUA010000176.1 RefSeq gene 1886 3070 . - . ID=gene-L2557_RS11770;Name=L2557_RS11770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11770 NZ_JAIKUA010000176.1 Protein Homology CDS 1886 3070 . - 0 ID=cds-WP_075670528.1;Parent=gene-L2557_RS11770;Dbxref=GenBank:WP_075670528.1;Name=WP_075670528.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243790.1;locus_tag=L2557_RS11770;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_075670528.1;transl_table=11 NZ_JAIKUA010000176.1 RefSeq gene 3299 5326 . - . ID=gene-L2557_RS11775;Name=ligA;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=L2557_RS11775 NZ_JAIKUA010000176.1 Protein Homology CDS 3299 5326 . - 0 ID=cds-WP_075670526.1;Parent=gene-L2557_RS11775;Dbxref=GenBank:WP_075670526.1;Name=WP_075670526.1;Ontology_term=GO:0006260,GO:0006281,GO:0003677,GO:0003911;gbkey=CDS;gene=ligA;go_function=DNA binding|0003677||IEA,DNA ligase (NAD+) activity|0003911||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248419.1;locus_tag=L2557_RS11775;product=NAD-dependent DNA ligase LigA;protein_id=WP_075670526.1;transl_table=11 NZ_JAIKUA010000176.1 RefSeq gene 5382 6410 . - . ID=gene-L2557_RS11780;Name=zipA;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=L2557_RS11780 NZ_JAIKUA010000176.1 Protein Homology CDS 5382 6410 . - 0 ID=cds-WP_156733746.1;Parent=gene-L2557_RS11780;Dbxref=GenBank:WP_156733746.1;Name=WP_156733746.1;Ontology_term=GO:0000917,GO:0005515,GO:0016020;gbkey=CDS;gene=zipA;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=division septum assembly|0000917||IEA;inference=COORDINATES: protein motif:HMM:TIGR02205.1;locus_tag=L2557_RS11780;product=cell division protein ZipA;protein_id=WP_156733746.1;transl_table=11 NZ_JAIKUA010000176.1 RefSeq gene 6634 7404 . + . ID=gene-L2557_RS11785;Name=cysZ;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=L2557_RS11785 NZ_JAIKUA010000176.1 Protein Homology CDS 6634 7404 . + 0 ID=cds-WP_099659382.1;Parent=gene-L2557_RS11785;Dbxref=GenBank:WP_099659382.1;Name=WP_099659382.1;Ontology_term=GO:0000103,GO:0015116,GO:0005886;gbkey=CDS;gene=cysZ;go_component=plasma membrane|0005886||IEA;go_function=sulfate transmembrane transporter activity|0015116||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243796.1;locus_tag=L2557_RS11785;product=sulfate transporter CysZ;protein_id=WP_099659382.1;transl_table=11 NZ_JAIKUA010000176.1 RefSeq gene 7518 8048 . - . ID=gene-L2557_RS11790;Name=L2557_RS11790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11790 NZ_JAIKUA010000176.1 Protein Homology CDS 7518 8048 . - 0 ID=cds-WP_075670520.1;Parent=gene-L2557_RS11790;Dbxref=GenBank:WP_075670520.1;Name=WP_075670520.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533405.1;locus_tag=L2557_RS11790;product=hypothetical protein;protein_id=WP_075670520.1;transl_table=11 NZ_JAIKUA010000176.1 RefSeq gene 8284 9237 . + . ID=gene-L2557_RS11795;Name=cysK;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=L2557_RS11795 NZ_JAIKUA010000176.1 Protein Homology CDS 8284 9237 . + 0 ID=cds-WP_075670518.1;Parent=gene-L2557_RS11795;Dbxref=GenBank:WP_075670518.1;Name=WP_075670518.1;Ontology_term=GO:0006535,GO:0004124;gbkey=CDS;gene=cysK;go_function=cysteine synthase activity|0004124||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248422.1;locus_tag=L2557_RS11795;product=cysteine synthase A;protein_id=WP_075670518.1;transl_table=11 NZ_JAIKUA010000176.1 RefSeq gene 9570 9827 . + . ID=gene-L2557_RS11800;Name=ptsH;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=L2557_RS11800 NZ_JAIKUA010000176.1 Protein Homology CDS 9570 9827 . + 0 ID=cds-WP_006533407.1;Parent=gene-L2557_RS11800;Dbxref=GenBank:WP_006533407.1;Name=WP_006533407.1;gbkey=CDS;gene=ptsH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003038086.1;locus_tag=L2557_RS11800;product=phosphocarrier protein Hpr;protein_id=WP_006533407.1;transl_table=11 NZ_JAIKUA010000176.1 RefSeq gene 9968 11695 . + . ID=gene-L2557_RS11805;Name=ptsI;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=L2557_RS11805 NZ_JAIKUA010000176.1 Protein Homology CDS 9968 11695 . + 0 ID=cds-WP_075670516.1;Parent=gene-L2557_RS11805;Dbxref=GenBank:WP_075670516.1;Name=WP_075670516.1;gbkey=CDS;gene=ptsI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870786.1;locus_tag=L2557_RS11805;product=phosphoenolpyruvate-protein phosphotransferase PtsI;protein_id=WP_075670516.1;transl_table=11 NZ_JAIKUA010000176.1 RefSeq gene 11745 12254 . + . ID=gene-L2557_RS11810;Name=crr;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=L2557_RS11810 NZ_JAIKUA010000176.1 Protein Homology CDS 11745 12254 . + 0 ID=cds-WP_036935451.1;Parent=gene-L2557_RS11810;Dbxref=GenBank:WP_036935451.1;Name=WP_036935451.1;Ontology_term=GO:0009401;gbkey=CDS;gene=crr;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833547.1;locus_tag=L2557_RS11810;product=PTS glucose transporter subunit IIA;protein_id=WP_036935451.1;transl_table=11 ##sequence-region NZ_JAIKUA010000177.1 1 9809 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000177.1 RefSeq region 1 9809 . + . ID=NZ_JAIKUA010000177.1:1..9809;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000177.1 RefSeq gene 183 1595 . - . ID=gene-L2557_RS11815;Name=pykF;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=L2557_RS11815 NZ_JAIKUA010000177.1 Protein Homology CDS 183 1595 . - 0 ID=cds-WP_235410061.1;Parent=gene-L2557_RS11815;Dbxref=GenBank:WP_235410061.1;Name=WP_235410061.1;Ontology_term=GO:0006096,GO:0004743;gbkey=CDS;gene=pykF;go_function=pyruvate kinase activity|0004743||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010346010.1;locus_tag=L2557_RS11815;product=pyruvate kinase PykF;protein_id=WP_235410061.1;transl_table=11 NZ_JAIKUA010000177.1 RefSeq gene 2063 2139 . - . ID=gene-L2557_RS11820;Name=L2557_RS11820;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS11820 NZ_JAIKUA010000177.1 tRNAscan-SE tRNA 2063 2139 . - . ID=rna-L2557_RS11820;Parent=gene-L2557_RS11820;anticodon=(pos:complement(2103..2105));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS11820;product=tRNA-Val NZ_JAIKUA010000177.1 tRNAscan-SE exon 2063 2139 . - . ID=exon-L2557_RS11820-1;Parent=rna-L2557_RS11820;anticodon=(pos:complement(2103..2105));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS11820;product=tRNA-Val NZ_JAIKUA010000177.1 RefSeq gene 2170 2246 . - . ID=gene-L2557_RS11825;Name=L2557_RS11825;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS11825 NZ_JAIKUA010000177.1 tRNAscan-SE tRNA 2170 2246 . - . ID=rna-L2557_RS11825;Parent=gene-L2557_RS11825;anticodon=(pos:complement(2210..2212));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS11825;product=tRNA-Val NZ_JAIKUA010000177.1 tRNAscan-SE exon 2170 2246 . - . ID=exon-L2557_RS11825-1;Parent=rna-L2557_RS11825;anticodon=(pos:complement(2210..2212));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS11825;product=tRNA-Val NZ_JAIKUA010000177.1 RefSeq gene 2395 3768 . - . ID=gene-L2557_RS11830;Name=L2557_RS11830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11830 NZ_JAIKUA010000177.1 Protein Homology CDS 2395 3768 . - 0 ID=cds-WP_075673230.1;Parent=gene-L2557_RS11830;Dbxref=GenBank:WP_075673230.1;Name=WP_075673230.1;Ontology_term=GO:0006855,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250988.1;locus_tag=L2557_RS11830;product=MATE family efflux transporter;protein_id=WP_075673230.1;transl_table=11 NZ_JAIKUA010000177.1 RefSeq gene 4082 4753 . + . ID=gene-L2557_RS11835;Name=L2557_RS11835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11835 NZ_JAIKUA010000177.1 Protein Homology CDS 4082 4753 . + 0 ID=cds-WP_075673231.1;Parent=gene-L2557_RS11835;Dbxref=GenBank:WP_075673231.1;Name=WP_075673231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243145.1;locus_tag=L2557_RS11835;product=riboflavin synthase subunit alpha;protein_id=WP_075673231.1;transl_table=11 NZ_JAIKUA010000177.1 RefSeq gene 4835 5989 . - . ID=gene-L2557_RS11840;Name=cfa;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=L2557_RS11840 NZ_JAIKUA010000177.1 Protein Homology CDS 4835 5989 . - 0 ID=cds-WP_099659674.1;Parent=gene-L2557_RS11840;Dbxref=GenBank:WP_099659674.1;Name=WP_099659674.1;gbkey=CDS;gene=cfa;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243144.1;locus_tag=L2557_RS11840;product=cyclopropane fatty acyl phospholipid synthase;protein_id=WP_099659674.1;transl_table=11 NZ_JAIKUA010000177.1 RefSeq gene 6295 7512 . - . ID=gene-L2557_RS11845;Name=punC;gbkey=Gene;gene=punC;gene_biotype=protein_coding;gene_synonym=ydhC;locus_tag=L2557_RS11845 NZ_JAIKUA010000177.1 Protein Homology CDS 6295 7512 . - 0 ID=cds-WP_075673233.1;Parent=gene-L2557_RS11845;Dbxref=GenBank:WP_075673233.1;Name=WP_075673233.1;Ontology_term=GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;gene=punC;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248166.1;locus_tag=L2557_RS11845;product=purine nucleoside transporter PunC;protein_id=WP_075673233.1;transl_table=11 NZ_JAIKUA010000177.1 RefSeq gene 7631 8533 . + . ID=gene-L2557_RS11850;Name=punR;gbkey=Gene;gene=punR;gene_biotype=protein_coding;locus_tag=L2557_RS11850 NZ_JAIKUA010000177.1 Protein Homology CDS 7631 8533 . + 0 ID=cds-WP_075673234.1;Parent=gene-L2557_RS11850;Dbxref=GenBank:WP_075673234.1;Name=WP_075673234.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=punR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243142.1;locus_tag=L2557_RS11850;product=DNA-binding transcriptional activator PunR;protein_id=WP_075673234.1;transl_table=11 NZ_JAIKUA010000177.1 RefSeq gene 8560 9585 . - . ID=gene-L2557_RS11855;Name=purR;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=L2557_RS11855 NZ_JAIKUA010000177.1 Protein Homology CDS 8560 9585 . - 0 ID=cds-WP_075673235.1;Parent=gene-L2557_RS11855;Dbxref=GenBank:WP_075673235.1;Name=WP_075673235.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=purR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127190.1;locus_tag=L2557_RS11855;product=HTH-type transcriptional repressor PurR;protein_id=WP_075673235.1;transl_table=11 ##sequence-region NZ_JAIKUA010000178.1 1 2522 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000178.1 RefSeq region 1 2522 . + . ID=NZ_JAIKUA010000178.1:1..2522;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000178.1 RefSeq gene 1 916 . + . ID=gene-L2557_RS11860;Name=L2557_RS11860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11860;partial=true;start_range=.,1 NZ_JAIKUA010000178.1 Protein Homology CDS 1 916 . + 1 ID=cds-WP_235410062.1;Parent=gene-L2557_RS11860;Dbxref=GenBank:WP_235410062.1;Name=WP_235410062.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018244.6;locus_tag=L2557_RS11860;partial=true;product=IpaD/SipD/SspD family type III secretion system needle tip protein;protein_id=WP_235410062.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000178.1 RefSeq gene 1021 2522 . - . ID=gene-L2557_RS11865;Name=L2557_RS11865;end_range=2522,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11865;partial=true NZ_JAIKUA010000178.1 Protein Homology CDS 1021 2522 . - 2 ID=cds-WP_235410063.1;Parent=gene-L2557_RS11865;Dbxref=GenBank:WP_235410063.1;Name=WP_235410063.1;Ontology_term=GO:0015891,GO:0055085,GO:0015267,GO:0009279,GO:0016020;end_range=2522,.;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=channel activity|0015267||IEA;go_process=siderophore transport|0015891||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827365.1;locus_tag=L2557_RS11865;partial=true;product=TonB-dependent receptor plug domain-containing protein;protein_id=WP_235410063.1;transl_table=11 ##sequence-region NZ_JAIKUA010000179.1 1 8770 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000179.1 RefSeq region 1 8770 . + . ID=NZ_JAIKUA010000179.1:1..8770;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000179.1 RefSeq gene 441 1226 . - . ID=gene-L2557_RS11870;Name=phoH;gbkey=Gene;gene=phoH;gene_biotype=protein_coding;locus_tag=L2557_RS11870 NZ_JAIKUA010000179.1 Protein Homology CDS 441 1226 . - 0 ID=cds-WP_075674290.1;Parent=gene-L2557_RS11870;Dbxref=GenBank:WP_075674290.1;Name=WP_075674290.1;gbkey=CDS;gene=phoH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243190.1;locus_tag=L2557_RS11870;product=phosphate starvation-inducible protein PhoH;protein_id=WP_075674290.1;transl_table=11 NZ_JAIKUA010000179.1 RefSeq gene 1577 2020 . + . ID=gene-L2557_RS11875;Name=L2557_RS11875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11875 NZ_JAIKUA010000179.1 Protein Homology CDS 1577 2020 . + 0 ID=cds-WP_075674291.1;Parent=gene-L2557_RS11875;Dbxref=GenBank:WP_075674291.1;Name=WP_075674291.1;Ontology_term=GO:0032259,GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248191.1;locus_tag=L2557_RS11875;product=methyltransferase family protein;protein_id=WP_075674291.1;transl_table=11 NZ_JAIKUA010000179.1 RefSeq gene 2036 3019 . - . ID=gene-L2557_RS11880;Name=L2557_RS11880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11880 NZ_JAIKUA010000179.1 Protein Homology CDS 2036 3019 . - 0 ID=cds-WP_075674292.1;Parent=gene-L2557_RS11880;Dbxref=GenBank:WP_075674292.1;Name=WP_075674292.1;Ontology_term=GO:0004518;gbkey=CDS;go_function=nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015834688.1;locus_tag=L2557_RS11880;product=endonuclease;protein_id=WP_075674292.1;transl_table=11 NZ_JAIKUA010000179.1 RefSeq gene 3273 3455 . + . ID=gene-L2557_RS11885;Name=L2557_RS11885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11885 NZ_JAIKUA010000179.1 Protein Homology CDS 3273 3455 . + 0 ID=cds-WP_036912881.1;Parent=gene-L2557_RS11885;Dbxref=GenBank:WP_036912881.1;Name=WP_036912881.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248195.1;locus_tag=L2557_RS11885;product=hypothetical protein;protein_id=WP_036912881.1;transl_table=11 NZ_JAIKUA010000179.1 RefSeq gene 3460 3933 . - . ID=gene-L2557_RS11890;Name=L2557_RS11890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11890 NZ_JAIKUA010000179.1 Protein Homology CDS 3460 3933 . - 0 ID=cds-WP_088495400.1;Parent=gene-L2557_RS11890;Dbxref=GenBank:WP_088495400.1;Name=WP_088495400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248197.1;locus_tag=L2557_RS11890;product=threonine/serine exporter;protein_id=WP_088495400.1;transl_table=11 NZ_JAIKUA010000179.1 RefSeq gene 3924 4727 . - . ID=gene-L2557_RS11895;Name=L2557_RS11895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11895 NZ_JAIKUA010000179.1 Protein Homology CDS 3924 4727 . - 0 ID=cds-WP_099660326.1;Parent=gene-L2557_RS11895;Dbxref=GenBank:WP_099660326.1;Name=WP_099660326.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536489.1;locus_tag=L2557_RS11895;product=threonine/serine exporter family protein;protein_id=WP_099660326.1;transl_table=11 NZ_JAIKUA010000179.1 RefSeq gene 5025 5438 . - . ID=gene-L2557_RS11900;Name=L2557_RS11900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11900 NZ_JAIKUA010000179.1 Protein Homology CDS 5025 5438 . - 0 ID=cds-WP_075674299.1;Parent=gene-L2557_RS11900;Dbxref=GenBank:WP_075674299.1;Name=WP_075674299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628070.1;locus_tag=L2557_RS11900;product=hypothetical protein;protein_id=WP_075674299.1;transl_table=11 NZ_JAIKUA010000179.1 RefSeq gene 5649 6086 . - . ID=gene-L2557_RS11905;Name=L2557_RS11905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11905 NZ_JAIKUA010000179.1 Protein Homology CDS 5649 6086 . - 0 ID=cds-WP_075674295.1;Parent=gene-L2557_RS11905;Dbxref=GenBank:WP_075674295.1;Name=WP_075674295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536488.1;locus_tag=L2557_RS11905;product=universal stress protein;protein_id=WP_075674295.1;transl_table=11 NZ_JAIKUA010000179.1 RefSeq gene 6151 6489 . - . ID=gene-L2557_RS11910;Name=L2557_RS11910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11910 NZ_JAIKUA010000179.1 Protein Homology CDS 6151 6489 . - 0 ID=cds-WP_075674296.1;Parent=gene-L2557_RS11910;Dbxref=GenBank:WP_075674296.1;Name=WP_075674296.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243204.1;locus_tag=L2557_RS11910;product=hypothetical protein;protein_id=WP_075674296.1;transl_table=11 NZ_JAIKUA010000179.1 RefSeq gene 6608 7036 . - . ID=gene-L2557_RS11915;Name=L2557_RS11915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11915 NZ_JAIKUA010000179.1 Protein Homology CDS 6608 7036 . - 0 ID=cds-WP_075674297.1;Parent=gene-L2557_RS11915;Dbxref=GenBank:WP_075674297.1;Name=WP_075674297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536486.1;locus_tag=L2557_RS11915;product=universal stress protein;protein_id=WP_075674297.1;transl_table=11 NZ_JAIKUA010000179.1 RefSeq gene 7179 8063 . - . ID=gene-L2557_RS11920;Name=L2557_RS11920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11920 NZ_JAIKUA010000179.1 Protein Homology CDS 7179 8063 . - 0 ID=cds-WP_099660325.1;Parent=gene-L2557_RS11920;Dbxref=GenBank:WP_099660325.1;Name=WP_099660325.1;Ontology_term=GO:0016836;gbkey=CDS;go_function=hydro-lyase activity|0016836||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536485.1;locus_tag=L2557_RS11920;product=NAD(P)H-hydrate dehydratase;protein_id=WP_099660325.1;transl_table=11 NZ_JAIKUA010000179.1 RefSeq gene 8342 8563 . + . ID=gene-L2557_RS11925;Name=L2557_RS11925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11925 NZ_JAIKUA010000179.1 Protein Homology CDS 8342 8563 . + 0 ID=cds-WP_036936466.1;Parent=gene-L2557_RS11925;Dbxref=GenBank:WP_036936466.1;Name=WP_036936466.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248201.1;locus_tag=L2557_RS11925;product=DUF2594 family protein;protein_id=WP_036936466.1;transl_table=11 ##sequence-region NZ_JAIKUA010000018.1 1 46396 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000018.1 RefSeq region 1 46396 . + . ID=NZ_JAIKUA010000018.1:1..46396;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000018.1 RefSeq gene 324 1910 . + . ID=gene-L2557_RS01800;Name=L2557_RS01800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01800 NZ_JAIKUA010000018.1 Protein Homology CDS 324 1910 . + 0 ID=cds-WP_088494291.1;Parent=gene-L2557_RS01800;Dbxref=GenBank:WP_088494291.1;Name=WP_088494291.1;Ontology_term=GO:0016310,GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249050.1;locus_tag=L2557_RS01800;product=FGGY-family carbohydrate kinase;protein_id=WP_088494291.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 1961 3607 . + . ID=gene-L2557_RS01805;Name=L2557_RS01805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01805 NZ_JAIKUA010000018.1 Protein Homology CDS 1961 3607 . + 0 ID=cds-WP_075671193.1;Parent=gene-L2557_RS01805;Dbxref=GenBank:WP_075671193.1;Name=WP_075671193.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534527.1;locus_tag=L2557_RS01805;product=signal transduction protein;protein_id=WP_075671193.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 3618 4547 . + . ID=gene-L2557_RS01810;Name=L2557_RS01810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01810 NZ_JAIKUA010000018.1 Protein Homology CDS 3618 4547 . + 0 ID=cds-WP_099659213.1;Parent=gene-L2557_RS01810;Dbxref=GenBank:WP_099659213.1;Name=WP_099659213.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249052.1;locus_tag=L2557_RS01810;product=dihydrodipicolinate synthase family protein;protein_id=WP_099659213.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 4570 5622 . + . ID=gene-L2557_RS01815;Name=L2557_RS01815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01815 NZ_JAIKUA010000018.1 Protein Homology CDS 4570 5622 . + 0 ID=cds-WP_075671197.1;Parent=gene-L2557_RS01815;Dbxref=GenBank:WP_075671197.1;Name=WP_075671197.1;Ontology_term=GO:0005975,GO:0004308,GO:0016997;gbkey=CDS;go_function=exo-alpha-sialidase activity|0004308||IEA,alpha-sialidase activity|0016997||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249053.1;locus_tag=L2557_RS01815;product=sialidase family protein;protein_id=WP_075671197.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 5643 6617 . + . ID=gene-L2557_RS01820;Name=L2557_RS01820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01820 NZ_JAIKUA010000018.1 Protein Homology CDS 5643 6617 . + 0 ID=cds-WP_223672646.1;Parent=gene-L2557_RS01820;Dbxref=GenBank:WP_223672646.1;Name=WP_223672646.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249054.1;locus_tag=L2557_RS01820;product=tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_223672646.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 6679 7140 . + . ID=gene-L2557_RS01825;Name=L2557_RS01825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01825 NZ_JAIKUA010000018.1 Protein Homology CDS 6679 7140 . + 0 ID=cds-WP_075671202.1;Parent=gene-L2557_RS01825;Dbxref=GenBank:WP_075671202.1;Name=WP_075671202.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534532.1;locus_tag=L2557_RS01825;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_075671202.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 7160 8677 . + . ID=gene-L2557_RS01830;Name=L2557_RS01830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01830 NZ_JAIKUA010000018.1 Protein Homology CDS 7160 8677 . + 0 ID=cds-WP_075671204.1;Parent=gene-L2557_RS01830;Dbxref=GenBank:WP_075671204.1;Name=WP_075671204.1;Ontology_term=GO:0006810,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534533.1;locus_tag=L2557_RS01830;product=tripartite tricarboxylate transporter permease;protein_id=WP_075671204.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 8731 9735 . + . ID=gene-L2557_RS01835;Name=L2557_RS01835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01835 NZ_JAIKUA010000018.1 Protein Homology CDS 8731 9735 . + 0 ID=cds-WP_075671206.1;Parent=gene-L2557_RS01835;Dbxref=GenBank:WP_075671206.1;Name=WP_075671206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534534.1;locus_tag=L2557_RS01835;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_075671206.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 9807 10904 . + . ID=gene-L2557_RS01840;Name=L2557_RS01840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01840 NZ_JAIKUA010000018.1 Protein Homology CDS 9807 10904 . + 0 ID=cds-WP_075671208.1;Parent=gene-L2557_RS01840;Dbxref=GenBank:WP_075671208.1;Name=WP_075671208.1;Ontology_term=GO:0000287,GO:0005524,GO:0042803;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,ATP binding|0005524||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010848040.1;locus_tag=L2557_RS01840;product=Fic family protein;protein_id=WP_075671208.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 11100 11690 . + . ID=gene-L2557_RS01845;Name=L2557_RS01845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01845 NZ_JAIKUA010000018.1 Protein Homology CDS 11100 11690 . + 0 ID=cds-WP_075671210.1;Parent=gene-L2557_RS01845;Dbxref=GenBank:WP_075671210.1;Name=WP_075671210.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246743.1;locus_tag=L2557_RS01845;product=DUF4291 domain-containing protein;protein_id=WP_075671210.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 11741 12640 . - . ID=gene-L2557_RS01850;Name=metF;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=L2557_RS01850 NZ_JAIKUA010000018.1 Protein Homology CDS 11741 12640 . - 0 ID=cds-WP_075671212.1;Parent=gene-L2557_RS01850;Dbxref=GenBank:WP_075671212.1;Name=WP_075671212.1;Ontology_term=GO:0009086,GO:0004489;gbkey=CDS;gene=metF;go_function=methylenetetrahydrofolate reductase [NAD(P)H] activity|0004489||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010281488.1;locus_tag=L2557_RS01850;product=methylenetetrahydrofolate reductase;protein_id=WP_075671212.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 12919 13278 . + . ID=gene-L2557_RS01855;Name=L2557_RS01855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01855 NZ_JAIKUA010000018.1 Protein Homology CDS 12919 13278 . + 0 ID=cds-WP_075671214.1;Parent=gene-L2557_RS01855;Dbxref=GenBank:WP_075671214.1;Name=WP_075671214.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237368.1;locus_tag=L2557_RS01855;product=DUF488 domain-containing protein;protein_id=WP_075671214.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 13396 14889 . - . ID=gene-L2557_RS01860;Name=glpD;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=L2557_RS01860 NZ_JAIKUA010000018.1 Protein Homology CDS 13396 14889 . - 0 ID=cds-WP_075671216.1;Parent=gene-L2557_RS01860;Dbxref=GenBank:WP_075671216.1;Name=WP_075671216.1;Ontology_term=GO:0006072,GO:0004368,GO:0009331;gbkey=CDS;gene=glpD;go_component=glycerol-3-phosphate dehydrogenase (FAD) complex|0009331||IEA;go_function=glycerol-3-phosphate dehydrogenase (quinone) activity|0004368||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246748.1;locus_tag=L2557_RS01860;product=glycerol-3-phosphate dehydrogenase;protein_id=WP_075671216.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 15200 15958 . - . ID=gene-L2557_RS01865;Name=L2557_RS01865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01865 NZ_JAIKUA010000018.1 Protein Homology CDS 15200 15958 . - 0 ID=cds-WP_006534541.1;Parent=gene-L2557_RS01865;Dbxref=GenBank:WP_006534541.1;Name=WP_006534541.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009635717.1;locus_tag=L2557_RS01865;product=DeoR/GlpR family transcriptional regulator;protein_id=WP_006534541.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 15997 16836 . - . ID=gene-L2557_RS01870;Name=glpG;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=L2557_RS01870 NZ_JAIKUA010000018.1 Protein Homology CDS 15997 16836 . - 0 ID=cds-WP_099659211.1;Parent=gene-L2557_RS01870;Dbxref=GenBank:WP_099659211.1;Name=WP_099659211.1;Ontology_term=GO:0006508,GO:0004252,GO:0016020;gbkey=CDS;gene=glpG;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246754.1;locus_tag=L2557_RS01870;product=rhomboid family intramembrane serine protease GlpG;protein_id=WP_099659211.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 16856 17182 . - . ID=gene-L2557_RS01875;Name=glpE;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=L2557_RS01875 NZ_JAIKUA010000018.1 Protein Homology CDS 16856 17182 . - 0 ID=cds-WP_075671220.1;Parent=gene-L2557_RS01875;Dbxref=GenBank:WP_075671220.1;Name=WP_075671220.1;Ontology_term=GO:0004792;gbkey=CDS;gene=glpE;go_function=thiosulfate-cyanide sulfurtransferase activity|0004792||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246755.1;locus_tag=L2557_RS01875;product=thiosulfate sulfurtransferase GlpE;protein_id=WP_075671220.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 17362 17940 . - . ID=gene-L2557_RS01880;Name=nfuA;gbkey=Gene;gene=nfuA;gene_biotype=protein_coding;locus_tag=L2557_RS01880 NZ_JAIKUA010000018.1 Protein Homology CDS 17362 17940 . - 0 ID=cds-WP_099659210.1;Parent=gene-L2557_RS01880;Dbxref=GenBank:WP_099659210.1;Name=WP_099659210.1;Ontology_term=GO:0016226,GO:0051604,GO:0051539;gbkey=CDS;gene=nfuA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA,protein maturation|0051604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016942932.1;locus_tag=L2557_RS01880;product=Fe-S biogenesis protein NfuA;protein_id=WP_099659210.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 18001 18693 . - . ID=gene-L2557_RS01885;Name=gntX;gbkey=Gene;gene=gntX;gene_biotype=protein_coding;locus_tag=L2557_RS01885 NZ_JAIKUA010000018.1 Protein Homology CDS 18001 18693 . - 0 ID=cds-WP_075671224.1;Parent=gene-L2557_RS01885;Dbxref=GenBank:WP_075671224.1;Name=WP_075671224.1;Ontology_term=GO:0009116;gbkey=CDS;gene=gntX;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827133.1;locus_tag=L2557_RS01885;product=DNA utilization protein GntX;protein_id=WP_075671224.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 18731 19504 . + . ID=gene-L2557_RS01890;Name=bioH;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=L2557_RS01890 NZ_JAIKUA010000018.1 Protein Homology CDS 18731 19504 . + 0 ID=cds-WP_099659209.1;Parent=gene-L2557_RS01890;Dbxref=GenBank:WP_099659209.1;Name=WP_099659209.1;Ontology_term=GO:0009102,GO:0052689;gbkey=CDS;gene=bioH;go_function=carboxylic ester hydrolase activity|0052689||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250033.1;locus_tag=L2557_RS01890;product=pimeloyl-ACP methyl ester esterase BioH;protein_id=WP_099659209.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 19564 19872 . - . ID=gene-L2557_RS01895;Name=L2557_RS01895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01895 NZ_JAIKUA010000018.1 Protein Homology CDS 19564 19872 . - 0 ID=cds-WP_223673801.1;Parent=gene-L2557_RS01895;Dbxref=GenBank:WP_223673801.1;Name=WP_223673801.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: protein motif:HMM:NF014608.6;locus_tag=L2557_RS01895;product=OsmC family protein;protein_id=WP_223673801.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 19770 20009 . - . ID=gene-L2557_RS01900;Name=L2557_RS01900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01900 NZ_JAIKUA010000018.1 GeneMarkS-2+ CDS 19770 20009 . - 0 ID=cds-WP_223673790.1;Parent=gene-L2557_RS01900;Dbxref=GenBank:WP_223673790.1;Name=WP_223673790.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS01900;product=hypothetical protein;protein_id=WP_223673790.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 20200 20658 . - . ID=gene-L2557_RS01905;Name=L2557_RS01905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01905 NZ_JAIKUA010000018.1 Protein Homology CDS 20200 20658 . - 0 ID=cds-WP_099659208.1;Parent=gene-L2557_RS01905;Dbxref=GenBank:WP_099659208.1;Name=WP_099659208.1;Ontology_term=GO:0006979,GO:0004601;gbkey=CDS;go_function=peroxidase activity|0004601||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246759.1;locus_tag=L2557_RS01905;product=OsmC family protein;protein_id=WP_099659208.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 20844 21074 . - . ID=gene-L2557_RS01910;Name=L2557_RS01910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01910 NZ_JAIKUA010000018.1 Protein Homology CDS 20844 21074 . - 0 ID=cds-WP_075671232.1;Parent=gene-L2557_RS01910;Dbxref=GenBank:WP_075671232.1;Name=WP_075671232.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010848396.1;locus_tag=L2557_RS01910;product=FeoC-like transcriptional regulator;protein_id=WP_075671232.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 21094 23421 . - . ID=gene-L2557_RS01915;Name=feoB;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=L2557_RS01915 NZ_JAIKUA010000018.1 Protein Homology CDS 21094 23421 . - 0 ID=cds-WP_099659207.1;Parent=gene-L2557_RS01915;Dbxref=GenBank:WP_099659207.1;Name=WP_099659207.1;Ontology_term=GO:0006826,GO:0005525,GO:0015093,GO:0016020;gbkey=CDS;gene=feoB;go_component=membrane|0016020||IEA;go_function=GTP binding|0005525||IEA,ferrous iron transmembrane transporter activity|0015093||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827130.1;locus_tag=L2557_RS01915;product=Fe(2+) transporter permease subunit FeoB;protein_id=WP_099659207.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 23470 23706 . - . ID=gene-L2557_RS01920;Name=feoA;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=L2557_RS01920 NZ_JAIKUA010000018.1 Protein Homology CDS 23470 23706 . - 0 ID=cds-WP_036914344.1;Parent=gene-L2557_RS01920;Dbxref=GenBank:WP_036914344.1;Name=WP_036914344.1;gbkey=CDS;gene=feoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246763.1;locus_tag=L2557_RS01920;product=ferrous iron transporter A;protein_id=WP_036914344.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 24103 25548 . - . ID=gene-L2557_RS01925;Name=L2557_RS01925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01925 NZ_JAIKUA010000018.1 Protein Homology CDS 24103 25548 . - 0 ID=cds-WP_099659206.1;Parent=gene-L2557_RS01925;Dbxref=GenBank:WP_099659206.1;Name=WP_099659206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249059.1;locus_tag=L2557_RS01925;product=DUF4026 domain-containing protein;protein_id=WP_099659206.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 25774 26271 . - . ID=gene-L2557_RS01930;Name=yihI;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=L2557_RS01930 NZ_JAIKUA010000018.1 Protein Homology CDS 25774 26271 . - 0 ID=cds-WP_075671238.1;Parent=gene-L2557_RS01930;Dbxref=GenBank:WP_075671238.1;Name=WP_075671238.1;gbkey=CDS;gene=yihI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249060.1;locus_tag=L2557_RS01930;product=Der GTPase-activating protein YihI;protein_id=WP_075671238.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 26460 27932 . + . ID=gene-L2557_RS01935;Name=L2557_RS01935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01935 NZ_JAIKUA010000018.1 Protein Homology CDS 26460 27932 . + 0 ID=cds-WP_075671240.1;Parent=gene-L2557_RS01935;Dbxref=GenBank:WP_075671240.1;Name=WP_075671240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368550.1;locus_tag=L2557_RS01935;product=glycosyltransferase family 39 protein;protein_id=WP_075671240.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 27935 28483 . + . ID=gene-L2557_RS01940;Name=L2557_RS01940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01940 NZ_JAIKUA010000018.1 Protein Homology CDS 27935 28483 . + 0 ID=cds-WP_099659205.1;Parent=gene-L2557_RS01940;Dbxref=GenBank:WP_099659205.1;Name=WP_099659205.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246767.1;locus_tag=L2557_RS01940;product=GNAT family N-acetyltransferase;protein_id=WP_099659205.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 28533 28844 . - . ID=gene-L2557_RS01945;Name=L2557_RS01945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01945 NZ_JAIKUA010000018.1 Protein Homology CDS 28533 28844 . - 0 ID=cds-WP_098941657.1;Parent=gene-L2557_RS01945;Dbxref=GenBank:WP_098941657.1;Name=WP_098941657.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006663117.1;locus_tag=L2557_RS01945;product=monooxygenase;protein_id=WP_098941657.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 28925 30283 . - . ID=gene-L2557_RS01950;Name=L2557_RS01950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01950 NZ_JAIKUA010000018.1 Protein Homology CDS 28925 30283 . - 0 ID=cds-WP_075671246.1;Parent=gene-L2557_RS01950;Dbxref=GenBank:WP_075671246.1;Name=WP_075671246.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249062.1;locus_tag=L2557_RS01950;product=NCS2 family permease;protein_id=WP_075671246.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 30440 30694 . - . ID=gene-L2557_RS01955;Name=L2557_RS01955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01955 NZ_JAIKUA010000018.1 Protein Homology CDS 30440 30694 . - 0 ID=cds-WP_075671248.1;Parent=gene-L2557_RS01955;Dbxref=GenBank:WP_075671248.1;Name=WP_075671248.1;Ontology_term=GO:0008219;gbkey=CDS;go_process=cell death|0008219||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000767836.1;locus_tag=L2557_RS01955;product=Txe/YoeB family addiction module toxin;protein_id=WP_075671248.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 30691 30942 . - . ID=gene-L2557_RS01960;Name=yefM;gbkey=Gene;gene=yefM;gene_biotype=protein_coding;locus_tag=L2557_RS01960 NZ_JAIKUA010000018.1 Protein Homology CDS 30691 30942 . - 0 ID=cds-WP_072068851.1;Parent=gene-L2557_RS01960;Dbxref=GenBank:WP_072068851.1;Name=WP_072068851.1;gbkey=CDS;gene=yefM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009114639.1;locus_tag=L2557_RS01960;product=YoeB-YefM toxin-antitoxin system antitoxin YefM;protein_id=WP_072068851.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 31173 31925 . - . ID=gene-L2557_RS01965;Name=L2557_RS01965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01965 NZ_JAIKUA010000018.1 Protein Homology CDS 31173 31925 . - 0 ID=cds-WP_075671250.1;Parent=gene-L2557_RS01965;Dbxref=GenBank:WP_075671250.1;Name=WP_075671250.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246783.1;locus_tag=L2557_RS01965;product=amino acid ABC transporter permease;protein_id=WP_075671250.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 31927 32664 . - . ID=gene-L2557_RS01970;Name=L2557_RS01970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01970 NZ_JAIKUA010000018.1 Protein Homology CDS 31927 32664 . - 0 ID=cds-WP_099659203.1;Parent=gene-L2557_RS01970;Dbxref=GenBank:WP_099659203.1;Name=WP_099659203.1;Ontology_term=GO:0006865,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246784.1;locus_tag=L2557_RS01970;product=amino acid ABC transporter permease;protein_id=WP_099659203.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 32771 33610 . - . ID=gene-L2557_RS01975;Name=L2557_RS01975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS01975 NZ_JAIKUA010000018.1 Protein Homology CDS 32771 33610 . - 0 ID=cds-WP_036933789.1;Parent=gene-L2557_RS01975;Dbxref=GenBank:WP_036933789.1;Name=WP_036933789.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628645.1;locus_tag=L2557_RS01975;product=ABC transporter substrate-binding protein;protein_id=WP_036933789.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 33826 34560 . - . ID=gene-L2557_RS01980;Name=phoU;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=L2557_RS01980 NZ_JAIKUA010000018.1 Protein Homology CDS 33826 34560 . - 0 ID=cds-WP_075671254.1;Parent=gene-L2557_RS01980;Dbxref=GenBank:WP_075671254.1;Name=WP_075671254.1;Ontology_term=GO:0030643;gbkey=CDS;gene=phoU;go_process=intracellular phosphate ion homeostasis|0030643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534564.1;locus_tag=L2557_RS01980;product=phosphate signaling complex protein PhoU;protein_id=WP_075671254.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 34575 35351 . - . ID=gene-L2557_RS01985;Name=pstB;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=L2557_RS01985 NZ_JAIKUA010000018.1 Protein Homology CDS 34575 35351 . - 0 ID=cds-WP_006534565.1;Parent=gene-L2557_RS01985;Dbxref=GenBank:WP_006534565.1;Name=WP_006534565.1;Ontology_term=GO:0006817,GO:0005524,GO:0015415,GO:0009898,GO:0055052;gbkey=CDS;gene=pstB;go_component=cytoplasmic side of plasma membrane|0009898||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled phosphate ion transmembrane transporter activity|0015415||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004923601.1;locus_tag=L2557_RS01985;product=phosphate ABC transporter ATP-binding protein PstB;protein_id=WP_006534565.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 35381 36283 . - . ID=gene-L2557_RS01990;Name=pstA;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=L2557_RS01990 NZ_JAIKUA010000018.1 Protein Homology CDS 35381 36283 . - 0 ID=cds-WP_075671256.1;Parent=gene-L2557_RS01990;Dbxref=GenBank:WP_075671256.1;Name=WP_075671256.1;Ontology_term=GO:0035435,GO:0005886;gbkey=CDS;gene=pstA;go_component=plasma membrane|0005886||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249075.1;locus_tag=L2557_RS01990;product=phosphate ABC transporter permease PstA;protein_id=WP_075671256.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 36285 37244 . - . ID=gene-L2557_RS01995;Name=pstC;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=L2557_RS01995 NZ_JAIKUA010000018.1 Protein Homology CDS 36285 37244 . - 0 ID=cds-WP_075671258.1;Parent=gene-L2557_RS01995;Dbxref=GenBank:WP_075671258.1;Name=WP_075671258.1;Ontology_term=GO:0006817,GO:0055085,GO:0016020;gbkey=CDS;gene=pstC;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010300064.1;locus_tag=L2557_RS01995;product=phosphate ABC transporter permease PstC;protein_id=WP_075671258.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 37322 38362 . - . ID=gene-L2557_RS02000;Name=pstS;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=L2557_RS02000 NZ_JAIKUA010000018.1 Protein Homology CDS 37322 38362 . - 0 ID=cds-WP_075671260.1;Parent=gene-L2557_RS02000;Dbxref=GenBank:WP_075671260.1;Name=WP_075671260.1;Ontology_term=GO:0035435,GO:0042301,GO:0043190;gbkey=CDS;gene=pstS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=phosphate ion binding|0042301||IEA;go_process=phosphate ion transmembrane transport|0035435||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011817473.1;locus_tag=L2557_RS02000;product=phosphate ABC transporter substrate-binding protein PstS;protein_id=WP_075671260.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 38576 39916 . - . ID=gene-L2557_RS02005;Name=envZ;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;locus_tag=L2557_RS02005 NZ_JAIKUA010000018.1 Protein Homology CDS 38576 39916 . - 0 ID=cds-WP_235409748.1;Parent=gene-L2557_RS02005;Dbxref=GenBank:WP_235409748.1;Name=WP_235409748.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=envZ;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368538.1;locus_tag=L2557_RS02005;product=two-component system sensor histidine kinase EnvZ;protein_id=WP_235409748.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 39913 40635 . - . ID=gene-L2557_RS02010;Name=ompR;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=L2557_RS02010 NZ_JAIKUA010000018.1 Protein Homology CDS 39913 40635 . - 0 ID=cds-WP_075671264.1;Parent=gene-L2557_RS02010;Dbxref=GenBank:WP_075671264.1;Name=WP_075671264.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=ompR;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF007005.1;locus_tag=L2557_RS02010;product=osmolarity response regulator transcription factor OmpR;protein_id=WP_075671264.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 40785 41264 . - . ID=gene-L2557_RS02015;Name=greB;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=L2557_RS02015 NZ_JAIKUA010000018.1 Protein Homology CDS 40785 41264 . - 0 ID=cds-WP_075671266.1;Parent=gene-L2557_RS02015;Dbxref=GenBank:WP_075671266.1;Name=WP_075671266.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greB;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246793.1;locus_tag=L2557_RS02015;product=transcription elongation factor GreB;protein_id=WP_075671266.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 41446 43785 . + . ID=gene-L2557_RS02020;Name=L2557_RS02020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02020 NZ_JAIKUA010000018.1 Protein Homology CDS 41446 43785 . + 0 ID=cds-WP_075671268.1;Parent=gene-L2557_RS02020;Dbxref=GenBank:WP_075671268.1;Name=WP_075671268.1;Ontology_term=GO:0003676,GO:0003729,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=nucleic acid binding|0003676||IEA,mRNA binding|0003729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246794.1;locus_tag=L2557_RS02020;product=Tex family protein;protein_id=WP_075671268.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 44266 44940 . + . ID=gene-L2557_RS02025;Name=L2557_RS02025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02025 NZ_JAIKUA010000018.1 Protein Homology CDS 44266 44940 . + 0 ID=cds-WP_099659257.1;Parent=gene-L2557_RS02025;Dbxref=GenBank:WP_099659257.1;Name=WP_099659257.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249080.1;locus_tag=L2557_RS02025;product=CsgG/HfaB family protein;protein_id=WP_099659257.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 44965 45318 . + . ID=gene-L2557_RS02030;Name=L2557_RS02030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02030 NZ_JAIKUA010000018.1 Protein Homology CDS 44965 45318 . + 0 ID=cds-WP_075671270.1;Parent=gene-L2557_RS02030;Dbxref=GenBank:WP_075671270.1;Name=WP_075671270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246796.1;locus_tag=L2557_RS02030;product=DUF4810 domain-containing protein;protein_id=WP_075671270.1;transl_table=11 NZ_JAIKUA010000018.1 RefSeq gene 45315 45971 . + . ID=gene-L2557_RS02035;Name=L2557_RS02035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02035 NZ_JAIKUA010000018.1 Protein Homology CDS 45315 45971 . + 0 ID=cds-WP_075671272.1;Parent=gene-L2557_RS02035;Dbxref=GenBank:WP_075671272.1;Name=WP_075671272.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246797.1;locus_tag=L2557_RS02035;product=DUF799 domain-containing protein;protein_id=WP_075671272.1;transl_table=11 ##sequence-region NZ_JAIKUA010000180.1 1 2679 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000180.1 RefSeq region 1 2679 . + . ID=NZ_JAIKUA010000180.1:1..2679;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000180.1 RefSeq gene 217 1701 . + . ID=gene-L2557_RS11930;Name=putP;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=L2557_RS11930 NZ_JAIKUA010000180.1 Protein Homology CDS 217 1701 . + 0 ID=cds-WP_099660610.1;Parent=gene-L2557_RS11930;Dbxref=GenBank:WP_099660610.1;Name=WP_099660610.1;Ontology_term=GO:0006814,GO:0015824,GO:0005298,GO:0031402,GO:0016020;gbkey=CDS;gene=putP;go_component=membrane|0016020||IEA;go_function=proline:sodium symporter activity|0005298||IEA,sodium ion binding|0031402||IEA;go_process=sodium ion transport|0006814||IEA,proline transport|0015824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250801.1;locus_tag=L2557_RS11930;product=sodium/proline symporter PutP;protein_id=WP_099660610.1;transl_table=11 NZ_JAIKUA010000180.1 RefSeq gene 1796 2679 . - . ID=gene-L2557_RS11935;Name=L2557_RS11935;end_range=2679,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11935;partial=true NZ_JAIKUA010000180.1 GeneMarkS-2+ CDS 1796 2679 . - 2 ID=cds-WP_235410064.1;Parent=gene-L2557_RS11935;Dbxref=GenBank:WP_235410064.1;Name=WP_235410064.1;end_range=2679,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS11935;partial=true;product=hypothetical protein;protein_id=WP_235410064.1;transl_table=11 ##sequence-region NZ_JAIKUA010000181.1 1 2940 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000181.1 RefSeq region 1 2940 . + . ID=NZ_JAIKUA010000181.1:1..2940;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000181.1 RefSeq gene 142 678 . - . ID=gene-L2557_RS11940;Name=umoA;gbkey=Gene;gene=umoA;gene_biotype=protein_coding;locus_tag=L2557_RS11940 NZ_JAIKUA010000181.1 Protein Homology CDS 142 678 . - 0 ID=cds-WP_099659545.1;Parent=gene-L2557_RS11940;Dbxref=GenBank:WP_099659545.1;Name=WP_099659545.1;gbkey=CDS;gene=umoA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534301.1;locus_tag=L2557_RS11940;product=UmoA family flagellar biogenesis regulator;protein_id=WP_099659545.1;transl_table=11 NZ_JAIKUA010000181.1 RefSeq gene 878 1846 . + . ID=gene-L2557_RS11945;Name=L2557_RS11945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11945 NZ_JAIKUA010000181.1 Protein Homology CDS 878 1846 . + 0 ID=cds-WP_099659544.1;Parent=gene-L2557_RS11945;Dbxref=GenBank:WP_099659544.1;Name=WP_099659544.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246525.1;locus_tag=L2557_RS11945;product=nitrilase family protein;protein_id=WP_099659544.1;transl_table=11 NZ_JAIKUA010000181.1 RefSeq gene 2021 2908 . + . ID=gene-L2557_RS11950;Name=L2557_RS11950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11950 NZ_JAIKUA010000181.1 Protein Homology CDS 2021 2908 . + 0 ID=cds-WP_099659543.1;Parent=gene-L2557_RS11950;Dbxref=GenBank:WP_099659543.1;Name=WP_099659543.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368630.1;locus_tag=L2557_RS11950;product=LysR family transcriptional regulator;protein_id=WP_099659543.1;transl_table=11 ##sequence-region NZ_JAIKUA010000182.1 1 25288 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000182.1 RefSeq region 1 25288 . + . ID=NZ_JAIKUA010000182.1:1..25288;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000182.1 RefSeq gene 52 1338 . - . ID=gene-L2557_RS11955;Name=L2557_RS11955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11955 NZ_JAIKUA010000182.1 Protein Homology CDS 52 1338 . - 0 ID=cds-WP_075671314.1;Parent=gene-L2557_RS11955;Dbxref=GenBank:WP_075671314.1;Name=WP_075671314.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827115.1;locus_tag=L2557_RS11955;product=DUF3748 domain-containing protein;protein_id=WP_075671314.1;transl_table=11 NZ_JAIKUA010000182.1 RefSeq gene 1475 2092 . + . ID=gene-L2557_RS11960;Name=L2557_RS11960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11960 NZ_JAIKUA010000182.1 Protein Homology CDS 1475 2092 . + 0 ID=cds-WP_006534609.1;Parent=gene-L2557_RS11960;Dbxref=GenBank:WP_006534609.1;Name=WP_006534609.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534609.1;locus_tag=L2557_RS11960;product=trimeric intracellular cation channel family protein;protein_id=WP_006534609.1;transl_table=11 NZ_JAIKUA010000182.1 RefSeq gene 2398 3021 . + . ID=gene-L2557_RS11965;Name=gmk;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=L2557_RS11965 NZ_JAIKUA010000182.1 Protein Homology CDS 2398 3021 . + 0 ID=cds-WP_006534608.1;Parent=gene-L2557_RS11965;Dbxref=GenBank:WP_006534608.1;Name=WP_006534608.1;Ontology_term=GO:0006163,GO:0004385;gbkey=CDS;gene=gmk;go_function=GMP kinase activity|0004385||IEA;go_process=purine nucleotide metabolic process|0006163||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000046969.1;locus_tag=L2557_RS11965;product=guanylate kinase;protein_id=WP_006534608.1;transl_table=11 NZ_JAIKUA010000182.1 RefSeq gene 3076 3351 . + . ID=gene-L2557_RS11970;Name=rpoZ;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=L2557_RS11970 NZ_JAIKUA010000182.1 Protein Homology CDS 3076 3351 . + 0 ID=cds-WP_004246820.1;Parent=gene-L2557_RS11970;Dbxref=GenBank:WP_004246820.1;Name=WP_004246820.1;Ontology_term=GO:0006351,GO:0003899;gbkey=CDS;gene=rpoZ;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013511051.1;locus_tag=L2557_RS11970;product=DNA-directed RNA polymerase subunit omega;protein_id=WP_004246820.1;transl_table=11 NZ_JAIKUA010000182.1 RefSeq gene 3381 5507 . + . ID=gene-L2557_RS11975;Name=spoT;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=L2557_RS11975 NZ_JAIKUA010000182.1 Protein Homology CDS 3381 5507 . + 0 ID=cds-WP_075671312.1;Parent=gene-L2557_RS11975;Dbxref=GenBank:WP_075671312.1;Name=WP_075671312.1;Ontology_term=GO:0015969,GO:0008728,GO:0008893;gbkey=CDS;gene=spoT;go_function=GTP diphosphokinase activity|0008728||IEA,guanosine-3'%2C5'-bis(diphosphate) 3'-diphosphatase activity|0008893||IEA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229464.1;locus_tag=L2557_RS11975;product=bifunctional GTP diphosphokinase/guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=WP_075671312.1;transl_table=11 NZ_JAIKUA010000182.1 RefSeq gene 5510 6232 . + . ID=gene-L2557_RS11980;Name=trmH;gbkey=Gene;gene=trmH;gene_biotype=protein_coding;locus_tag=L2557_RS11980 NZ_JAIKUA010000182.1 Protein Homology CDS 5510 6232 . + 0 ID=cds-WP_075671310.1;Parent=gene-L2557_RS11980;Dbxref=GenBank:WP_075671310.1;Name=WP_075671310.1;Ontology_term=GO:0030488,GO:0141100;gbkey=CDS;gene=trmH;go_function=tRNA (guanine(18)-2'-O)-methyltransferase activity|0141100||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246818.1;locus_tag=L2557_RS11980;product=tRNA (guanosine(18)-2'-O)-methyltransferase TrmH;protein_id=WP_075671310.1;transl_table=11 NZ_JAIKUA010000182.1 RefSeq gene 6237 8324 . + . ID=gene-L2557_RS11985;Name=recG;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=L2557_RS11985 NZ_JAIKUA010000182.1 Protein Homology CDS 6237 8324 . + 0 ID=cds-WP_075671308.1;Parent=gene-L2557_RS11985;Dbxref=GenBank:WP_075671308.1;Name=WP_075671308.1;Ontology_term=GO:0006281,GO:0006310,GO:0003676,GO:0003678,GO:0005524;gbkey=CDS;gene=recG;go_function=nucleic acid binding|0003676||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209004.1;locus_tag=L2557_RS11985;product=ATP-dependent DNA helicase RecG;protein_id=WP_075671308.1;transl_table=11 NZ_JAIKUA010000182.1 RefSeq gene 8487 9704 . - . ID=gene-L2557_RS11990;Name=gltS;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=L2557_RS11990 NZ_JAIKUA010000182.1 Protein Homology CDS 8487 9704 . - 0 ID=cds-WP_075671305.1;Parent=gene-L2557_RS11990;Dbxref=GenBank:WP_075671305.1;Name=WP_075671305.1;Ontology_term=GO:0015813,GO:0015501,GO:0016020;gbkey=CDS;gene=gltS;go_component=membrane|0016020||IEA;go_function=glutamate:sodium symporter activity|0015501||IEA;go_process=L-glutamate transmembrane transport|0015813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813773.1;locus_tag=L2557_RS11990;product=sodium/glutamate symporter;protein_id=WP_075671305.1;transl_table=11 NZ_JAIKUA010000182.1 RefSeq gene 9946 11337 . + . ID=gene-L2557_RS11995;Name=L2557_RS11995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS11995 NZ_JAIKUA010000182.1 Protein Homology CDS 9946 11337 . + 0 ID=cds-WP_099659200.1;Parent=gene-L2557_RS11995;Dbxref=GenBank:WP_099659200.1;Name=WP_099659200.1;Ontology_term=GO:0015851,GO:0055085,GO:0015205,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA,transmembrane transporter activity|0022857||IEA;go_process=nucleobase transport|0015851||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246815.1;locus_tag=L2557_RS11995;product=uracil-xanthine permease family protein;protein_id=WP_099659200.1;transl_table=11 NZ_JAIKUA010000182.1 RefSeq gene 11531 13207 . + . ID=gene-L2557_RS12000;Name=L2557_RS12000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12000 NZ_JAIKUA010000182.1 Protein Homology CDS 11531 13207 . + 0 ID=cds-WP_075671300.1;Parent=gene-L2557_RS12000;Dbxref=GenBank:WP_075671300.1;Name=WP_075671300.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249086.1;locus_tag=L2557_RS12000;product=AsmA family protein;protein_id=WP_075671300.1;transl_table=11 NZ_JAIKUA010000182.1 RefSeq gene 13295 13534 . + . ID=gene-L2557_RS12005;Name=L2557_RS12005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12005 NZ_JAIKUA010000182.1 Protein Homology CDS 13295 13534 . + 0 ID=cds-WP_075671299.1;Parent=gene-L2557_RS12005;Dbxref=GenBank:WP_075671299.1;Name=WP_075671299.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246813.1;locus_tag=L2557_RS12005;product=hypothetical protein;protein_id=WP_075671299.1;transl_table=11 NZ_JAIKUA010000182.1 RefSeq gene 13624 14505 . - . ID=gene-L2557_RS12010;Name=rluF;gbkey=Gene;gene=rluF;gene_biotype=protein_coding;locus_tag=L2557_RS12010 NZ_JAIKUA010000182.1 Protein Homology CDS 13624 14505 . - 0 ID=cds-WP_075671297.1;Parent=gene-L2557_RS12010;Dbxref=GenBank:WP_075671297.1;Name=WP_075671297.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluF;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628653.1;locus_tag=L2557_RS12010;product=23S rRNA pseudouridine(2604) synthase RluF;protein_id=WP_075671297.1;transl_table=11 NZ_JAIKUA010000182.1 RefSeq gene 14680 15594 . - . ID=gene-L2557_RS12015;Name=fabY;gbkey=Gene;gene=fabY;gene_biotype=protein_coding;gene_synonym=yiiD;locus_tag=L2557_RS12015 NZ_JAIKUA010000182.1 Protein Homology CDS 14680 15594 . - 0 ID=cds-WP_075671286.1;Parent=gene-L2557_RS12015;Dbxref=GenBank:WP_075671286.1;Name=WP_075671286.1;gbkey=CDS;gene=fabY;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246811.1;locus_tag=L2557_RS12015;product=fatty acid biosynthesis protein FabY;protein_id=WP_075671286.1;transl_table=11 NZ_JAIKUA010000182.1 RefSeq gene 15631 16068 . - . ID=gene-L2557_RS12020;Name=dtd;gbkey=Gene;gene=dtd;gene_biotype=protein_coding;locus_tag=L2557_RS12020 NZ_JAIKUA010000182.1 Protein Homology CDS 15631 16068 . - 0 ID=cds-WP_072064855.1;Parent=gene-L2557_RS12020;Dbxref=GenBank:WP_072064855.1;Name=WP_072064855.1;Ontology_term=GO:0008152,GO:0004045;gbkey=CDS;gene=dtd;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012147545.1;locus_tag=L2557_RS12020;product=D-aminoacyl-tRNA deacylase;protein_id=WP_072064855.1;transl_table=11 NZ_JAIKUA010000182.1 RefSeq gene 16136 16753 . - . ID=gene-L2557_RS12025;Name=yihX;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=L2557_RS12025 NZ_JAIKUA010000182.1 Protein Homology CDS 16136 16753 . - 0 ID=cds-WP_075671284.1;Parent=gene-L2557_RS12025;Dbxref=GenBank:WP_075671284.1;Name=WP_075671284.1;gbkey=CDS;gene=yihX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246809.1;locus_tag=L2557_RS12025;product=glucose-1-phosphatase;protein_id=WP_075671284.1;transl_table=11 NZ_JAIKUA010000182.1 RefSeq gene 17219 19054 . - . ID=gene-L2557_RS12030;Name=typA;gbkey=Gene;gene=typA;gene_biotype=protein_coding;locus_tag=L2557_RS12030 NZ_JAIKUA010000182.1 Protein Homology CDS 17219 19054 . - 0 ID=cds-WP_075671282.1;Parent=gene-L2557_RS12030;Dbxref=GenBank:WP_075671282.1;Name=WP_075671282.1;gbkey=CDS;gene=typA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246802.1;locus_tag=L2557_RS12030;product=ribosome-dependent GTPase TypA;protein_id=WP_075671282.1;transl_table=11 NZ_JAIKUA010000182.1 RefSeq gene 19414 20823 . + . ID=gene-L2557_RS12035;Name=glnA;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=L2557_RS12035 NZ_JAIKUA010000182.1 Protein Homology CDS 19414 20823 . + 0 ID=cds-WP_075671280.1;Parent=gene-L2557_RS12035;Dbxref=GenBank:WP_075671280.1;Name=WP_075671280.1;Ontology_term=GO:0006542,GO:0008152,GO:0004356;gbkey=CDS;gene=glnA;go_function=glutamine synthetase activity|0004356||IEA;go_process=glutamine biosynthetic process|0006542||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246801.1;locus_tag=L2557_RS12035;product=glutamate--ammonia ligase;protein_id=WP_075671280.1;transl_table=11 NZ_JAIKUA010000182.1 RefSeq gene 21009 22055 . + . ID=gene-L2557_RS12040;Name=glnL;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=L2557_RS12040 NZ_JAIKUA010000182.1 Protein Homology CDS 21009 22055 . + 0 ID=cds-WP_075671278.1;Parent=gene-L2557_RS12040;Dbxref=GenBank:WP_075671278.1;Name=WP_075671278.1;Ontology_term=GO:0006355,GO:0007165,GO:0016310,GO:0000155;gbkey=CDS;gene=glnL;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249083.1;locus_tag=L2557_RS12040;product=nitrogen regulation protein NR(II);protein_id=WP_075671278.1;transl_table=11 NZ_JAIKUA010000182.1 RefSeq gene 22066 23490 . + . ID=gene-L2557_RS12045;Name=glnG;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=L2557_RS12045 NZ_JAIKUA010000182.1 Protein Homology CDS 22066 23490 . + 0 ID=cds-WP_099659201.1;Parent=gene-L2557_RS12045;Dbxref=GenBank:WP_099659201.1;Name=WP_099659201.1;Ontology_term=GO:0006355,GO:0043565;gbkey=CDS;gene=glnG;go_function=sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246799.1;locus_tag=L2557_RS12045;product=nitrogen regulation protein NR(I);protein_id=WP_099659201.1;transl_table=11 NZ_JAIKUA010000182.1 RefSeq gene 23511 24884 . - . ID=gene-L2557_RS12050;Name=hemN;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=L2557_RS12050 NZ_JAIKUA010000182.1 Protein Homology CDS 23511 24884 . - 0 ID=cds-WP_075671274.1;Parent=gene-L2557_RS12050;Dbxref=GenBank:WP_075671274.1;Name=WP_075671274.1;Ontology_term=GO:0006779,GO:0004109,GO:0005737;gbkey=CDS;gene=hemN;go_component=cytoplasm|0005737||IEA;go_function=coproporphyrinogen oxidase activity|0004109||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121847.1;locus_tag=L2557_RS12050;product=oxygen-independent coproporphyrinogen III oxidase;protein_id=WP_075671274.1;transl_table=11 ##sequence-region NZ_JAIKUA010000183.1 1 13841 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000183.1 RefSeq region 1 13841 . + . ID=NZ_JAIKUA010000183.1:1..13841;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000183.1 RefSeq gene 1 186 . + . ID=gene-L2557_RS12055;Name=L2557_RS12055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12055;partial=true;start_range=.,1 NZ_JAIKUA010000183.1 GeneMarkS-2+ CDS 1 186 . + 0 ID=cds-WP_235410065.1;Parent=gene-L2557_RS12055;Dbxref=GenBank:WP_235410065.1;Name=WP_235410065.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS12055;partial=true;product=hypothetical protein;protein_id=WP_235410065.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000183.1 RefSeq gene 285 1376 . - . ID=gene-L2557_RS12060;Name=ychF;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=L2557_RS12060 NZ_JAIKUA010000183.1 Protein Homology CDS 285 1376 . - 0 ID=cds-WP_072064039.1;Parent=gene-L2557_RS12060;Dbxref=GenBank:WP_072064039.1;Name=WP_072064039.1;Ontology_term=GO:0005524,GO:0005525,GO:0016887;gbkey=CDS;gene=ychF;go_function=ATP binding|0005524||IEA,GTP binding|0005525||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001538644.1;locus_tag=L2557_RS12060;product=redox-regulated ATPase YchF;protein_id=WP_072064039.1;transl_table=11 NZ_JAIKUA010000183.1 RefSeq gene 1561 2145 . - . ID=gene-L2557_RS12065;Name=pth;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=L2557_RS12065 NZ_JAIKUA010000183.1 Protein Homology CDS 1561 2145 . - 0 ID=cds-WP_036912918.1;Parent=gene-L2557_RS12065;Dbxref=GenBank:WP_036912918.1;Name=WP_036912918.1;Ontology_term=GO:0004045;gbkey=CDS;gene=pth;go_function=peptidyl-tRNA hydrolase activity|0004045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242660.1;locus_tag=L2557_RS12065;product=aminoacyl-tRNA hydrolase;protein_id=WP_036912918.1;transl_table=11 NZ_JAIKUA010000183.1 RefSeq gene 2489 2767 . + . ID=gene-L2557_RS12070;Name=ychH;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=L2557_RS12070 NZ_JAIKUA010000183.1 Protein Homology CDS 2489 2767 . + 0 ID=cds-WP_075671005.1;Parent=gene-L2557_RS12070;Dbxref=GenBank:WP_075671005.1;Name=WP_075671005.1;gbkey=CDS;gene=ychH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242663.1;locus_tag=L2557_RS12070;product=stress-induced protein YchH;protein_id=WP_075671005.1;transl_table=11 NZ_JAIKUA010000183.1 RefSeq gene 3004 3951 . - . ID=gene-L2557_RS12075;Name=prs;gbkey=Gene;gene=prs;gene_biotype=protein_coding;locus_tag=L2557_RS12075 NZ_JAIKUA010000183.1 Protein Homology CDS 3004 3951 . - 0 ID=cds-WP_036912921.1;Parent=gene-L2557_RS12075;Dbxref=GenBank:WP_036912921.1;Name=WP_036912921.1;gbkey=CDS;gene=prs;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002910407.1;locus_tag=L2557_RS12075;product=ribose-phosphate diphosphokinase;protein_id=WP_036912921.1;transl_table=11 NZ_JAIKUA010000183.1 RefSeq gene 4039 4914 . - . ID=gene-L2557_RS12080;Name=ispE;gbkey=Gene;gene=ispE;gene_biotype=protein_coding;locus_tag=L2557_RS12080 NZ_JAIKUA010000183.1 Protein Homology CDS 4039 4914 . - 0 ID=cds-WP_211838044.1;Parent=gene-L2557_RS12080;Dbxref=GenBank:WP_211838044.1;Name=WP_211838044.1;Ontology_term=GO:0016114,GO:0050515;gbkey=CDS;gene=ispE;go_function=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity|0050515||IEA;go_process=terpenoid biosynthetic process|0016114||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251402.1;locus_tag=L2557_RS12080;product=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase;protein_id=WP_211838044.1;transl_table=11 NZ_JAIKUA010000183.1 RefSeq gene 4911 5549 . - . ID=gene-L2557_RS12085;Name=lolB;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=L2557_RS12085 NZ_JAIKUA010000183.1 Protein Homology CDS 4911 5549 . - 0 ID=cds-WP_099660343.1;Parent=gene-L2557_RS12085;Dbxref=GenBank:WP_099660343.1;Name=WP_099660343.1;Ontology_term=GO:0015031,GO:0009279;gbkey=CDS;gene=lolB;go_component=cell outer membrane|0009279||IEA;go_process=protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827237.1;locus_tag=L2557_RS12085;product=lipoprotein insertase outer membrane protein LolB;protein_id=WP_099660343.1;transl_table=11 NZ_JAIKUA010000183.1 RefSeq gene 5790 7052 . + . ID=gene-L2557_RS12090;Name=hemA;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=L2557_RS12090 NZ_JAIKUA010000183.1 Protein Homology CDS 5790 7052 . + 0 ID=cds-WP_075671011.1;Parent=gene-L2557_RS12090;Dbxref=GenBank:WP_075671011.1;Name=WP_075671011.1;Ontology_term=GO:0008883,GO:0050661;gbkey=CDS;gene=hemA;go_function=glutamyl-tRNA reductase activity|0008883||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242677.1;locus_tag=L2557_RS12090;product=glutamyl-tRNA reductase;protein_id=WP_075671011.1;transl_table=11 NZ_JAIKUA010000183.1 RefSeq gene 7081 8163 . + . ID=gene-L2557_RS12095;Name=prfA;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=L2557_RS12095 NZ_JAIKUA010000183.1 Protein Homology CDS 7081 8163 . + 0 ID=cds-WP_075671013.1;Parent=gene-L2557_RS12095;Dbxref=GenBank:WP_075671013.1;Name=WP_075671013.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfA;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367851.1;locus_tag=L2557_RS12095;product=peptide chain release factor 1;protein_id=WP_075671013.1;transl_table=11 NZ_JAIKUA010000183.1 RefSeq gene 8163 9011 . + . ID=gene-L2557_RS12100;Name=prmC;gbkey=Gene;gene=prmC;gene_biotype=protein_coding;locus_tag=L2557_RS12100 NZ_JAIKUA010000183.1 Protein Homology CDS 8163 9011 . + 0 ID=cds-WP_075671015.1;Parent=gene-L2557_RS12100;Dbxref=GenBank:WP_075671015.1;Name=WP_075671015.1;Ontology_term=GO:0006412,GO:0018364,GO:0008757;gbkey=CDS;gene=prmC;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=translation|0006412||IEA,peptidyl-glutamine methylation|0018364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367852.1;locus_tag=L2557_RS12100;product=peptide chain release factor N(5)-glutamine methyltransferase;protein_id=WP_075671015.1;transl_table=11 NZ_JAIKUA010000183.1 RefSeq gene 8995 9804 . + . ID=gene-L2557_RS12105;Name=sirB1;gbkey=Gene;gene=sirB1;gene_biotype=protein_coding;locus_tag=L2557_RS12105 NZ_JAIKUA010000183.1 Protein Homology CDS 8995 9804 . + 0 ID=cds-WP_075671142.1;Parent=gene-L2557_RS12105;Dbxref=GenBank:WP_075671142.1;Name=WP_075671142.1;gbkey=CDS;gene=sirB1;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016256500.1;locus_tag=L2557_RS12105;product=invasion regulator SirB1;protein_id=WP_075671142.1;transl_table=11 NZ_JAIKUA010000183.1 RefSeq gene 9861 10715 . + . ID=gene-L2557_RS12110;Name=kdsA;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=L2557_RS12110 NZ_JAIKUA010000183.1 Protein Homology CDS 9861 10715 . + 0 ID=cds-WP_075671017.1;Parent=gene-L2557_RS12110;Dbxref=GenBank:WP_075671017.1;Name=WP_075671017.1;Ontology_term=GO:0008676;gbkey=CDS;gene=kdsA;go_function=3-deoxy-8-phosphooctulonate synthase activity|0008676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227529.1;locus_tag=L2557_RS12110;product=3-deoxy-8-phosphooctulonate synthase;protein_id=WP_075671017.1;transl_table=11 NZ_JAIKUA010000183.1 RefSeq gene 10723 11646 . + . ID=gene-L2557_RS12115;Name=mnmL;gbkey=Gene;gene=mnmL;gene_biotype=protein_coding;gene_synonym=ytqA;locus_tag=L2557_RS12115 NZ_JAIKUA010000183.1 Protein Homology CDS 10723 11646 . + 0 ID=cds-WP_099660345.1;Parent=gene-L2557_RS12115;Dbxref=GenBank:WP_099660345.1;Name=WP_099660345.1;Note=This family includes YhcC from E. coli K-12%2C an uncharacterized radical SAM protein.;Ontology_term=GO:0006400,GO:0051536,GO:1904047;gbkey=CDS;gene=mnmL;go_function=iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628160.1;locus_tag=L2557_RS12115;product=tRNA modification radical SAM protein MnmL/YtqA;protein_id=WP_099660345.1;transl_table=11 NZ_JAIKUA010000183.1 RefSeq gene 11792 13492 . - . ID=gene-L2557_RS12120;Name=dauA;gbkey=Gene;gene=dauA;gene_biotype=protein_coding;locus_tag=L2557_RS12120 NZ_JAIKUA010000183.1 Protein Homology CDS 11792 13492 . - 0 ID=cds-WP_098942637.1;Parent=gene-L2557_RS12120;Dbxref=GenBank:WP_098942637.1;Name=WP_098942637.1;gbkey=CDS;gene=dauA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827239.1;locus_tag=L2557_RS12120;product=C4-dicarboxylic acid transporter DauA;protein_id=WP_098942637.1;transl_table=11 ##sequence-region NZ_JAIKUA010000184.1 1 14060 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000184.1 RefSeq region 1 14060 . + . ID=NZ_JAIKUA010000184.1:1..14060;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000184.1 RefSeq gene 108 3149 . - . ID=gene-L2557_RS12125;Name=L2557_RS12125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12125 NZ_JAIKUA010000184.1 Protein Homology CDS 108 3149 . - 0 ID=cds-WP_196728408.1;Parent=gene-L2557_RS12125;Dbxref=GenBank:WP_196728408.1;Name=WP_196728408.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244196.1;locus_tag=L2557_RS12125;product=chondroitinase family polysaccharide lyase;protein_id=WP_196728408.1;transl_table=11 NZ_JAIKUA010000184.1 RefSeq gene 3204 6269 . - . ID=gene-L2557_RS12130;Name=L2557_RS12130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12130 NZ_JAIKUA010000184.1 Protein Homology CDS 3204 6269 . - 0 ID=cds-WP_223673990.1;Parent=gene-L2557_RS12130;Dbxref=GenBank:WP_223673990.1;Name=WP_223673990.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017627909.1;locus_tag=L2557_RS12130;product=chondroitinase family polysaccharide lyase;protein_id=WP_223673990.1;transl_table=11 NZ_JAIKUA010000184.1 RefSeq gene 6280 8445 . - . ID=gene-L2557_RS12135;Name=L2557_RS12135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12135 NZ_JAIKUA010000184.1 Protein Homology CDS 6280 8445 . - 0 ID=cds-WP_235410066.1;Parent=gene-L2557_RS12135;Dbxref=GenBank:WP_235410066.1;Name=WP_235410066.1;Ontology_term=GO:0015474,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=autotransporter activity|0015474||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244193.1;locus_tag=L2557_RS12135;product=autotransporter family protein;protein_id=WP_235410066.1;transl_table=11 NZ_JAIKUA010000184.1 RefSeq gene 8482 9366 . - . ID=gene-L2557_RS12140;Name=L2557_RS12140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12140 NZ_JAIKUA010000184.1 Protein Homology CDS 8482 9366 . - 0 ID=cds-WP_235410068.1;Parent=gene-L2557_RS12140;Dbxref=GenBank:WP_235410068.1;Name=WP_235410068.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533824.1;locus_tag=L2557_RS12140;product=OmpG porin family protein;protein_id=WP_235410068.1;transl_table=11 NZ_JAIKUA010000184.1 RefSeq gene 9513 11072 . - . ID=gene-L2557_RS12145;Name=L2557_RS12145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12145 NZ_JAIKUA010000184.1 Protein Homology CDS 9513 11072 . - 0 ID=cds-WP_075673699.1;Parent=gene-L2557_RS12145;Dbxref=GenBank:WP_075673699.1;Name=WP_075673699.1;Ontology_term=GO:0008484;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244191.1;locus_tag=L2557_RS12145;product=sulfatase-like hydrolase/transferase;protein_id=WP_075673699.1;transl_table=11 NZ_JAIKUA010000184.1 RefSeq gene 11399 11890 . - . ID=gene-L2557_RS12150;Name=L2557_RS12150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12150 NZ_JAIKUA010000184.1 Protein Homology CDS 11399 11890 . - 0 ID=cds-WP_223673992.1;Parent=gene-L2557_RS12150;Dbxref=GenBank:WP_223673992.1;Name=WP_223673992.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827202.1;locus_tag=L2557_RS12150;product=N-acetyltransferase;protein_id=WP_223673992.1;transl_table=11 NZ_JAIKUA010000184.1 RefSeq gene 12125 12874 . - . ID=gene-L2557_RS12155;Name=L2557_RS12155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12155 NZ_JAIKUA010000184.1 Protein Homology CDS 12125 12874 . - 0 ID=cds-WP_075673701.1;Parent=gene-L2557_RS12155;Dbxref=GenBank:WP_075673701.1;Name=WP_075673701.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250321.1;locus_tag=L2557_RS12155;product=YadA-like family protein;protein_id=WP_075673701.1;transl_table=11 NZ_JAIKUA010000184.1 RefSeq gene 13110 13937 . - . ID=gene-L2557_RS12160;Name=L2557_RS12160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12160 NZ_JAIKUA010000184.1 Protein Homology CDS 13110 13937 . - 0 ID=cds-WP_075670703.1;Parent=gene-L2557_RS12160;Dbxref=GenBank:WP_075670703.1;Name=WP_075670703.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244186.1;locus_tag=L2557_RS12160;product=MurR/RpiR family transcriptional regulator;protein_id=WP_075670703.1;transl_table=11 ##sequence-region NZ_JAIKUA010000185.1 1 27365 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000185.1 RefSeq region 1 27365 . + . ID=NZ_JAIKUA010000185.1:1..27365;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000185.1 RefSeq gene 256 2538 . + . ID=gene-L2557_RS12165;Name=maeB;gbkey=Gene;gene=maeB;gene_biotype=protein_coding;locus_tag=L2557_RS12165 NZ_JAIKUA010000185.1 Protein Homology CDS 256 2538 . + 0 ID=cds-WP_075671861.1;Parent=gene-L2557_RS12165;Dbxref=GenBank:WP_075671861.1;Name=WP_075671861.1;gbkey=CDS;gene=maeB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250839.1;locus_tag=L2557_RS12165;product=NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase;protein_id=WP_075671861.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 2721 3590 . + . ID=gene-L2557_RS12170;Name=L2557_RS12170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12170 NZ_JAIKUA010000185.1 Protein Homology CDS 2721 3590 . + 0 ID=cds-WP_075671859.1;Parent=gene-L2557_RS12170;Dbxref=GenBank:WP_075671859.1;Name=WP_075671859.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368031.1;locus_tag=L2557_RS12170;product=ChaN family lipoprotein;protein_id=WP_075671859.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 3675 4418 . + . ID=gene-L2557_RS12175;Name=L2557_RS12175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12175 NZ_JAIKUA010000185.1 Protein Homology CDS 3675 4418 . + 0 ID=cds-WP_235410069.1;Parent=gene-L2557_RS12175;Dbxref=GenBank:WP_235410069.1;Name=WP_235410069.1;Ontology_term=GO:0031992,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=energy transducer activity|0031992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248270.1;locus_tag=L2557_RS12175;product=energy transducer TonB family protein;protein_id=WP_235410069.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 4447 6615 . + . ID=gene-L2557_RS12180;Name=L2557_RS12180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12180 NZ_JAIKUA010000185.1 Protein Homology CDS 4447 6615 . + 0 ID=cds-WP_099660586.1;Parent=gene-L2557_RS12180;Dbxref=GenBank:WP_099660586.1;Name=WP_099660586.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248269.1;locus_tag=L2557_RS12180;product=S9 family peptidase;protein_id=WP_099660586.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 6779 9022 . + . ID=gene-L2557_RS12185;Name=L2557_RS12185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12185 NZ_JAIKUA010000185.1 Protein Homology CDS 6779 9022 . + 0 ID=cds-WP_099660585.1;Parent=gene-L2557_RS12185;Dbxref=GenBank:WP_099660585.1;Name=WP_099660585.1;Ontology_term=GO:0055085,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656105.1;locus_tag=L2557_RS12185;product=TonB-dependent receptor;protein_id=WP_099660585.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 9130 10512 . - . ID=gene-L2557_RS12190;Name=xseA;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=L2557_RS12190 NZ_JAIKUA010000185.1 Protein Homology CDS 9130 10512 . - 0 ID=cds-WP_098942515.1;Parent=gene-L2557_RS12190;Dbxref=GenBank:WP_098942515.1;Name=WP_098942515.1;Ontology_term=GO:0006308,GO:0008855,GO:0009318;gbkey=CDS;gene=xseA;go_component=exodeoxyribonuclease VII complex|0009318||IEA;go_function=exodeoxyribonuclease VII activity|0008855||IEA;go_process=DNA catabolic process|0006308||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533013.1;locus_tag=L2557_RS12190;product=exodeoxyribonuclease VII large subunit;protein_id=WP_098942515.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 10682 12148 . + . ID=gene-L2557_RS12195;Name=guaB;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=L2557_RS12195 NZ_JAIKUA010000185.1 Protein Homology CDS 10682 12148 . + 0 ID=cds-WP_075671849.1;Parent=gene-L2557_RS12195;Dbxref=GenBank:WP_075671849.1;Name=WP_075671849.1;Ontology_term=GO:0006164,GO:0003938;gbkey=CDS;gene=guaB;go_function=IMP dehydrogenase activity|0003938||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243391.1;locus_tag=L2557_RS12195;product=IMP dehydrogenase;protein_id=WP_075671849.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 12250 13827 . + . ID=gene-L2557_RS12200;Name=guaA;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=L2557_RS12200 NZ_JAIKUA010000185.1 Protein Homology CDS 12250 13827 . + 0 ID=cds-WP_098942517.1;Parent=gene-L2557_RS12200;Dbxref=GenBank:WP_098942517.1;Name=WP_098942517.1;Ontology_term=GO:0006177,GO:0003922,GO:0005524,GO:0016462;gbkey=CDS;gene=guaA;go_function=GMP synthase (glutamine-hydrolyzing) activity|0003922||IEA,ATP binding|0005524||IEA,pyrophosphatase activity|0016462||IEA;go_process=GMP biosynthetic process|0006177||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311396.1;locus_tag=L2557_RS12200;product=glutamine-hydrolyzing GMP synthase;protein_id=WP_098942517.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 14047 15243 . + . ID=gene-L2557_RS12205;Name=L2557_RS12205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12205 NZ_JAIKUA010000185.1 Protein Homology CDS 14047 15243 . + 0 ID=cds-WP_235410070.1;Parent=gene-L2557_RS12205;Dbxref=GenBank:WP_235410070.1;Name=WP_235410070.1;Ontology_term=GO:0006310,GO:0015074,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,DNA integration|0015074||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243389.1;locus_tag=L2557_RS12205;product=tyrosine-type recombinase/integrase;protein_id=WP_235410070.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 15439 15636 . - . ID=gene-L2557_RS12210;Name=L2557_RS12210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12210 NZ_JAIKUA010000185.1 Protein Homology CDS 15439 15636 . - 0 ID=cds-WP_036936127.1;Parent=gene-L2557_RS12210;Dbxref=GenBank:WP_036936127.1;Name=WP_036936127.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250849.1;locus_tag=L2557_RS12210;product=hypothetical protein;protein_id=WP_036936127.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 15639 16280 . - . ID=gene-L2557_RS12215;Name=L2557_RS12215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12215 NZ_JAIKUA010000185.1 Protein Homology CDS 15639 16280 . - 0 ID=cds-WP_235410071.1;Parent=gene-L2557_RS12215;Dbxref=GenBank:WP_235410071.1;Name=WP_235410071.1;Ontology_term=GO:0008168;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243384.1;locus_tag=L2557_RS12215;product=MT-A70 family methyltransferase;protein_id=WP_235410071.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 16267 16590 . - . ID=gene-L2557_RS12220;Name=L2557_RS12220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12220 NZ_JAIKUA010000185.1 Protein Homology CDS 16267 16590 . - 0 ID=cds-WP_235410074.1;Parent=gene-L2557_RS12220;Dbxref=GenBank:WP_235410074.1;Name=WP_235410074.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022224.6;locus_tag=L2557_RS12220;product=phage protein NinX family protein;protein_id=WP_235410074.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 16609 16887 . - . ID=gene-L2557_RS12225;Name=L2557_RS12225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12225 NZ_JAIKUA010000185.1 GeneMarkS-2+ CDS 16609 16887 . - 0 ID=cds-WP_196563361.1;Parent=gene-L2557_RS12225;Dbxref=GenBank:WP_196563361.1;Name=WP_196563361.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS12225;product=hypothetical protein;protein_id=WP_196563361.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 17045 17275 . - . ID=gene-L2557_RS12230;Name=L2557_RS12230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12230 NZ_JAIKUA010000185.1 Protein Homology CDS 17045 17275 . - 0 ID=cds-WP_235410076.1;Parent=gene-L2557_RS12230;Dbxref=GenBank:WP_235410076.1;Name=WP_235410076.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659477.1;locus_tag=L2557_RS12230;product=hypothetical protein;protein_id=WP_235410076.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 17272 17565 . - . ID=gene-L2557_RS12235;Name=L2557_RS12235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12235 NZ_JAIKUA010000185.1 GeneMarkS-2+ CDS 17272 17565 . - 0 ID=cds-WP_124740934.1;Parent=gene-L2557_RS12235;Dbxref=GenBank:WP_124740934.1;Name=WP_124740934.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS12235;product=hypothetical protein;protein_id=WP_124740934.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 17565 18098 . - . ID=gene-L2557_RS12240;Name=L2557_RS12240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12240 NZ_JAIKUA010000185.1 Protein Homology CDS 17565 18098 . - 0 ID=cds-WP_235410077.1;Parent=gene-L2557_RS12240;Dbxref=GenBank:WP_235410077.1;Name=WP_235410077.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367774.1;locus_tag=L2557_RS12240;product=hypothetical protein;protein_id=WP_235410077.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 18098 18400 . - . ID=gene-L2557_RS12245;Name=L2557_RS12245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12245 NZ_JAIKUA010000185.1 Protein Homology CDS 18098 18400 . - 0 ID=cds-WP_235410079.1;Parent=gene-L2557_RS12245;Dbxref=GenBank:WP_235410079.1;Name=WP_235410079.1;Ontology_term=GO:0008270,GO:0046983;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,protein dimerization activity|0046983||IEA;inference=COORDINATES: protein motif:HMM:NF018404.6;locus_tag=L2557_RS12245;product=ClpX C4-type zinc finger protein;protein_id=WP_235410079.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 18436 18774 . - . ID=gene-L2557_RS12250;Name=L2557_RS12250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12250 NZ_JAIKUA010000185.1 GeneMarkS-2+ CDS 18436 18774 . - 0 ID=cds-WP_235410080.1;Parent=gene-L2557_RS12250;Dbxref=GenBank:WP_235410080.1;Name=WP_235410080.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS12250;product=hypothetical protein;protein_id=WP_235410080.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 18839 19096 . - . ID=gene-L2557_RS12255;Name=L2557_RS12255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12255 NZ_JAIKUA010000185.1 Protein Homology CDS 18839 19096 . - 0 ID=cds-WP_004250862.1;Parent=gene-L2557_RS12255;Dbxref=GenBank:WP_004250862.1;Name=WP_004250862.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250862.1;locus_tag=L2557_RS12255;product=helix-turn-helix transcriptional regulator;protein_id=WP_004250862.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 19141 20181 . - . ID=gene-L2557_RS12260;Name=L2557_RS12260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12260 NZ_JAIKUA010000185.1 Protein Homology CDS 19141 20181 . - 0 ID=cds-WP_235410081.1;Parent=gene-L2557_RS12260;Dbxref=GenBank:WP_235410081.1;Name=WP_235410081.1;Ontology_term=GO:0006310,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243377.1;locus_tag=L2557_RS12260;product=RecT family recombinase;protein_id=WP_235410081.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 20227 21951 . - . ID=gene-L2557_RS12265;Name=L2557_RS12265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12265 NZ_JAIKUA010000185.1 Protein Homology CDS 20227 21951 . - 0 ID=cds-WP_235410082.1;Parent=gene-L2557_RS12265;Dbxref=GenBank:WP_235410082.1;Name=WP_235410082.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250864.1;locus_tag=L2557_RS12265;product=PD-(D/E)XK nuclease-like domain-containing protein;protein_id=WP_235410082.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 21938 22099 . - . ID=gene-L2557_RS12270;Name=L2557_RS12270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12270 NZ_JAIKUA010000185.1 Protein Homology CDS 21938 22099 . - 0 ID=cds-WP_004243375.1;Parent=gene-L2557_RS12270;Dbxref=GenBank:WP_004243375.1;Name=WP_004243375.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243375.1;locus_tag=L2557_RS12270;product=hypothetical protein;protein_id=WP_004243375.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 22348 22956 . - . ID=gene-L2557_RS12275;Name=L2557_RS12275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12275 NZ_JAIKUA010000185.1 Protein Homology CDS 22348 22956 . - 0 ID=cds-WP_004243373.1;Parent=gene-L2557_RS12275;Dbxref=GenBank:WP_004243373.1;Name=WP_004243373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243373.1;locus_tag=L2557_RS12275;product=hypothetical protein;protein_id=WP_004243373.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 23091 23312 . + . ID=gene-L2557_RS12280;Name=L2557_RS12280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12280 NZ_JAIKUA010000185.1 Protein Homology CDS 23091 23312 . + 0 ID=cds-WP_235410084.1;Parent=gene-L2557_RS12280;Dbxref=GenBank:WP_235410084.1;Name=WP_235410084.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243372.1;locus_tag=L2557_RS12280;product=hypothetical protein;protein_id=WP_235410084.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 23452 23637 . + . ID=gene-L2557_RS12285;Name=L2557_RS12285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12285 NZ_JAIKUA010000185.1 Protein Homology CDS 23452 23637 . + 0 ID=cds-WP_004243371.1;Parent=gene-L2557_RS12285;Dbxref=GenBank:WP_004243371.1;Name=WP_004243371.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243371.1;locus_tag=L2557_RS12285;product=hypothetical protein;protein_id=WP_004243371.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 23648 24490 . + . ID=gene-L2557_RS12290;Name=L2557_RS12290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12290 NZ_JAIKUA010000185.1 Protein Homology CDS 23648 24490 . + 0 ID=cds-WP_235410087.1;Parent=gene-L2557_RS12290;Dbxref=GenBank:WP_235410087.1;Name=WP_235410087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243369.1;locus_tag=L2557_RS12290;product=hypothetical protein;protein_id=WP_235410087.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 24490 25215 . + . ID=gene-L2557_RS12295;Name=L2557_RS12295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12295 NZ_JAIKUA010000185.1 Protein Homology CDS 24490 25215 . + 0 ID=cds-WP_004243368.1;Parent=gene-L2557_RS12295;Dbxref=GenBank:WP_004243368.1;Name=WP_004243368.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243368.1;locus_tag=L2557_RS12295;product=ATP-binding protein;protein_id=WP_004243368.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 25462 25875 . + . ID=gene-L2557_RS12300;Name=L2557_RS12300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12300 NZ_JAIKUA010000185.1 Protein Homology CDS 25462 25875 . + 0 ID=cds-WP_046334325.1;Parent=gene-L2557_RS12300;Dbxref=GenBank:WP_046334325.1;Name=WP_046334325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250869.1;locus_tag=L2557_RS12300;product=hypothetical protein;protein_id=WP_046334325.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 25872 26267 . + . ID=gene-L2557_RS12305;Name=L2557_RS12305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12305 NZ_JAIKUA010000185.1 Protein Homology CDS 25872 26267 . + 0 ID=cds-WP_104836503.1;Parent=gene-L2557_RS12305;Dbxref=GenBank:WP_104836503.1;Name=WP_104836503.1;Ontology_term=GO:0006281,GO:0006310,GO:0000287,GO:0000400,GO:0008821;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,four-way junction DNA binding|0000400||IEA,crossover junction DNA endonuclease activity|0008821||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250870.1;locus_tag=L2557_RS12305;product=RusA family crossover junction endodeoxyribonuclease;protein_id=WP_104836503.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 26390 26737 . + . ID=gene-L2557_RS12310;Name=L2557_RS12310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12310 NZ_JAIKUA010000185.1 Protein Homology CDS 26390 26737 . + 0 ID=cds-WP_158660325.1;Parent=gene-L2557_RS12310;Dbxref=GenBank:WP_158660325.1;Name=WP_158660325.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022224.6;locus_tag=L2557_RS12310;product=phage protein NinX family protein;protein_id=WP_158660325.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 26797 27138 . + . ID=gene-L2557_RS12315;Name=L2557_RS12315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12315 NZ_JAIKUA010000185.1 Protein Homology CDS 26797 27138 . + 0 ID=cds-WP_104836501.1;Parent=gene-L2557_RS12315;Dbxref=GenBank:WP_104836501.1;Name=WP_104836501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658836.1;locus_tag=L2557_RS12315;product=hypothetical protein;protein_id=WP_104836501.1;transl_table=11 NZ_JAIKUA010000185.1 RefSeq gene 27167 27365 . + . ID=gene-L2557_RS12320;Name=L2557_RS12320;end_range=27365,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12320;partial=true NZ_JAIKUA010000185.1 GeneMarkS-2+ CDS 27167 27365 . + 0 ID=cds-WP_235410088.1;Parent=gene-L2557_RS12320;Dbxref=GenBank:WP_235410088.1;Name=WP_235410088.1;end_range=27365,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS12320;partial=true;product=hypothetical protein;protein_id=WP_235410088.1;transl_table=11 ##sequence-region NZ_JAIKUA010000186.1 1 27123 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000186.1 RefSeq region 1 27123 . + . ID=NZ_JAIKUA010000186.1:1..27123;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000186.1 RefSeq gene 111 1079 . + . ID=gene-L2557_RS12325;Name=L2557_RS12325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12325 NZ_JAIKUA010000186.1 Protein Homology CDS 111 1079 . + 0 ID=cds-WP_075673808.1;Parent=gene-L2557_RS12325;Dbxref=GenBank:WP_075673808.1;Name=WP_075673808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536924.1;locus_tag=L2557_RS12325;product=vWA domain-containing protein;protein_id=WP_075673808.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 1159 2841 . - . ID=gene-L2557_RS12330;Name=L2557_RS12330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12330 NZ_JAIKUA010000186.1 Protein Homology CDS 1159 2841 . - 0 ID=cds-WP_075673809.1;Parent=gene-L2557_RS12330;Dbxref=GenBank:WP_075673809.1;Name=WP_075673809.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827699.1;locus_tag=L2557_RS12330;product=YdgA family protein;protein_id=WP_075673809.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 3422 4819 . + . ID=gene-L2557_RS12335;Name=fumC;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=L2557_RS12335 NZ_JAIKUA010000186.1 Protein Homology CDS 3422 4819 . + 0 ID=cds-WP_075673810.1;Parent=gene-L2557_RS12335;Dbxref=GenBank:WP_075673810.1;Name=WP_075673810.1;Ontology_term=GO:0006106,GO:0004333,GO:0045239;gbkey=CDS;gene=fumC;go_component=tricarboxylic acid cycle heteromeric enzyme complex|0045239||IEA;go_function=fumarate hydratase activity|0004333||IEA;go_process=fumarate metabolic process|0006106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017892719.1;locus_tag=L2557_RS12335;product=class II fumarate hydratase;protein_id=WP_075673810.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 4895 5254 . + . ID=gene-L2557_RS12340;Name=L2557_RS12340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12340 NZ_JAIKUA010000186.1 GeneMarkS-2+ CDS 4895 5254 . + 0 ID=cds-WP_156733391.1;Parent=gene-L2557_RS12340;Dbxref=GenBank:WP_156733391.1;Name=WP_156733391.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS12340;product=hypothetical protein;protein_id=WP_156733391.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 5263 6192 . - . ID=gene-L2557_RS12345;Name=tus;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=L2557_RS12345 NZ_JAIKUA010000186.1 Protein Homology CDS 5263 6192 . - 0 ID=cds-WP_075673812.1;Parent=gene-L2557_RS12345;Dbxref=GenBank:WP_075673812.1;Name=WP_075673812.1;Ontology_term=GO:0006274,GO:0003677,GO:0005737;gbkey=CDS;gene=tus;go_component=cytoplasm|0005737||IEA;go_function=DNA binding|0003677||IEA;go_process=DNA replication termination|0006274||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628102.1;locus_tag=L2557_RS12345;product=DNA replication terminus site-binding protein;protein_id=WP_075673812.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 6369 6539 . - . ID=gene-L2557_RS12350;Name=L2557_RS12350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12350 NZ_JAIKUA010000186.1 GeneMarkS-2+ CDS 6369 6539 . - 0 ID=cds-WP_156733393.1;Parent=gene-L2557_RS12350;Dbxref=GenBank:WP_156733393.1;Name=WP_156733393.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS12350;product=hypothetical protein;protein_id=WP_156733393.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 6650 7933 . - . ID=gene-L2557_RS12355;Name=L2557_RS12355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12355 NZ_JAIKUA010000186.1 Protein Homology CDS 6650 7933 . - 0 ID=cds-WP_099659704.1;Parent=gene-L2557_RS12355;Dbxref=GenBank:WP_099659704.1;Name=WP_099659704.1;Ontology_term=GO:0055085,GO:0022857,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243000.1;locus_tag=L2557_RS12355;product=MFS transporter;protein_id=WP_099659704.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 8059 8973 . + . ID=gene-L2557_RS12360;Name=L2557_RS12360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12360 NZ_JAIKUA010000186.1 Protein Homology CDS 8059 8973 . + 0 ID=cds-WP_075673814.1;Parent=gene-L2557_RS12360;Dbxref=GenBank:WP_075673814.1;Name=WP_075673814.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827700.1;locus_tag=L2557_RS12360;product=LysR family transcriptional regulator;protein_id=WP_075673814.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 9102 10313 . + . ID=gene-L2557_RS12365;Name=mlc;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;gene_synonym=dgsA;locus_tag=L2557_RS12365 NZ_JAIKUA010000186.1 Protein Homology CDS 9102 10313 . + 0 ID=cds-WP_083629119.1;Parent=gene-L2557_RS12365;Dbxref=GenBank:WP_083629119.1;Name=WP_083629119.1;Ontology_term=GO:0006355,GO:0003677,GO:0046872;gbkey=CDS;gene=mlc;go_function=DNA binding|0003677||IEA,metal ion binding|0046872||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242997.1;locus_tag=L2557_RS12365;product=sugar metabolism global transcriptional regulator Mlc;protein_id=WP_083629119.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 10509 11180 . + . ID=gene-L2557_RS12370;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=L2557_RS12370 NZ_JAIKUA010000186.1 Protein Homology CDS 10509 11180 . + 0 ID=cds-WP_075673816.1;Parent=gene-L2557_RS12370;Dbxref=GenBank:WP_075673816.1;Name=WP_075673816.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242994.1;locus_tag=L2557_RS12370;product=dethiobiotin synthase;protein_id=WP_075673816.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 11459 11695 . - . ID=gene-L2557_RS12375;Name=L2557_RS12375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12375 NZ_JAIKUA010000186.1 Protein Homology CDS 11459 11695 . - 0 ID=cds-WP_223673650.1;Parent=gene-L2557_RS12375;Dbxref=GenBank:WP_223673650.1;Name=WP_223673650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242993.1;locus_tag=L2557_RS12375;product=DUF1161 domain-containing protein;protein_id=WP_223673650.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 11749 12105 . - . ID=gene-L2557_RS12380;Name=L2557_RS12380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12380 NZ_JAIKUA010000186.1 Protein Homology CDS 11749 12105 . - 0 ID=cds-WP_075673818.1;Parent=gene-L2557_RS12380;Dbxref=GenBank:WP_075673818.1;Name=WP_075673818.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242992.1;locus_tag=L2557_RS12380;product=DUF1283 family protein;protein_id=WP_075673818.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 12206 12955 . - . ID=gene-L2557_RS12385;Name=ydfG;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=L2557_RS12385 NZ_JAIKUA010000186.1 Protein Homology CDS 12206 12955 . - 0 ID=cds-WP_223673649.1;Parent=gene-L2557_RS12385;Dbxref=GenBank:WP_223673649.1;Name=WP_223673649.1;Ontology_term=GO:0016491;gbkey=CDS;gene=ydfG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242991.1;locus_tag=L2557_RS12385;product=bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG;protein_id=WP_223673649.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 13474 13695 . - . ID=gene-L2557_RS12390;Name=osmB;gbkey=Gene;gene=osmB;gene_biotype=protein_coding;locus_tag=L2557_RS12390 NZ_JAIKUA010000186.1 Protein Homology CDS 13474 13695 . - 0 ID=cds-WP_006536908.1;Parent=gene-L2557_RS12390;Dbxref=GenBank:WP_006536908.1;Name=WP_006536908.1;gbkey=CDS;gene=osmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248092.1;locus_tag=L2557_RS12390;product=osmotically-inducible lipoprotein OsmB;protein_id=WP_006536908.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 13925 14911 . + . ID=gene-L2557_RS12395;Name=tehA;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=L2557_RS12395 NZ_JAIKUA010000186.1 Protein Homology CDS 13925 14911 . + 0 ID=cds-WP_075673820.1;Parent=gene-L2557_RS12395;Dbxref=GenBank:WP_075673820.1;Name=WP_075673820.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=tehA;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016536190.1;locus_tag=L2557_RS12395;product=dicarboxylate transporter/tellurite-resistance protein TehA;protein_id=WP_075673820.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 14958 15260 . + . ID=gene-L2557_RS12400;Name=L2557_RS12400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12400 NZ_JAIKUA010000186.1 GeneMarkS-2+ CDS 14958 15260 . + 0 ID=cds-WP_075673822.1;Parent=gene-L2557_RS12400;Dbxref=GenBank:WP_075673822.1;Name=WP_075673822.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS12400;product=hypothetical protein;protein_id=WP_075673822.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 15338 16501 . - . ID=gene-L2557_RS12405;Name=dhaT;gbkey=Gene;gene=dhaT;gene_biotype=protein_coding;locus_tag=L2557_RS12405 NZ_JAIKUA010000186.1 Protein Homology CDS 15338 16501 . - 0 ID=cds-WP_075673823.1;Parent=gene-L2557_RS12405;Dbxref=GenBank:WP_075673823.1;Name=WP_075673823.1;gbkey=CDS;gene=dhaT;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228921.1;locus_tag=L2557_RS12405;product=1%2C3-propanediol dehydrogenase;protein_id=WP_075673823.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 16763 17098 . + . ID=gene-L2557_RS12410;Name=L2557_RS12410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12410 NZ_JAIKUA010000186.1 Protein Homology CDS 16763 17098 . + 0 ID=cds-WP_075673824.1;Parent=gene-L2557_RS12410;Dbxref=GenBank:WP_075673824.1;Name=WP_075673824.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536906.1;locus_tag=L2557_RS12410;product=metalloregulator ArsR/SmtB family transcription factor;protein_id=WP_075673824.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 17173 18462 . + . ID=gene-L2557_RS12415;Name=L2557_RS12415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12415 NZ_JAIKUA010000186.1 Protein Homology CDS 17173 18462 . + 0 ID=cds-WP_159363972.1;Parent=gene-L2557_RS12415;Dbxref=GenBank:WP_159363972.1;Name=WP_159363972.1;Ontology_term=GO:0046685,GO:0015105,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=arsenite transmembrane transporter activity|0015105||IEA;go_process=response to arsenic-containing substance|0046685||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911201.1;locus_tag=L2557_RS12415;product=arsenic transporter;protein_id=WP_159363972.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 18473 18898 . + . ID=gene-L2557_RS12420;Name=arsC;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=L2557_RS12420 NZ_JAIKUA010000186.1 Protein Homology CDS 18473 18898 . + 0 ID=cds-WP_075673826.1;Parent=gene-L2557_RS12420;Dbxref=GenBank:WP_075673826.1;Name=WP_075673826.1;Ontology_term=GO:0008794;gbkey=CDS;gene=arsC;go_function=arsenate reductase (glutaredoxin) activity|0008794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007373719.1;locus_tag=L2557_RS12420;product=glutaredoxin-dependent arsenate reductase;protein_id=WP_075673826.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 19061 20182 . - . ID=gene-L2557_RS12425;Name=L2557_RS12425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12425 NZ_JAIKUA010000186.1 Protein Homology CDS 19061 20182 . - 0 ID=cds-WP_075673827.1;Parent=gene-L2557_RS12425;Dbxref=GenBank:WP_075673827.1;Name=WP_075673827.1;Ontology_term=GO:0043687,GO:0008198,GO:0016706;gbkey=CDS;go_function=ferrous iron binding|0008198||IEA,2-oxoglutarate-dependent dioxygenase activity|0016706||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005224890.1;locus_tag=L2557_RS12425;product=ribosomal protein uL16 3-hydroxylase;protein_id=WP_075673827.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 20904 21260 . - . ID=gene-L2557_RS12430;Name=L2557_RS12430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12430 NZ_JAIKUA010000186.1 Protein Homology CDS 20904 21260 . - 0 ID=cds-WP_075673828.1;Parent=gene-L2557_RS12430;Dbxref=GenBank:WP_075673828.1;Name=WP_075673828.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013096609.1;locus_tag=L2557_RS12430;product=DUF4186 domain-containing protein;protein_id=WP_075673828.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 21496 22200 . - . ID=gene-L2557_RS12435;Name=L2557_RS12435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12435 NZ_JAIKUA010000186.1 Protein Homology CDS 21496 22200 . - 0 ID=cds-WP_075673830.1;Parent=gene-L2557_RS12435;Dbxref=GenBank:WP_075673830.1;Name=WP_075673830.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226322.1;locus_tag=L2557_RS12435;product=ArsR/SmtB family transcription factor;protein_id=WP_075673830.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 22281 22595 . - . ID=gene-L2557_RS12440;Name=L2557_RS12440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12440 NZ_JAIKUA010000186.1 Protein Homology CDS 22281 22595 . - 0 ID=cds-WP_156733397.1;Parent=gene-L2557_RS12440;Dbxref=GenBank:WP_156733397.1;Name=WP_156733397.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015730037.1;locus_tag=L2557_RS12440;product=antibiotic biosynthesis monooxygenase family protein;protein_id=WP_156733397.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 22949 23521 . - . ID=gene-L2557_RS12445;Name=L2557_RS12445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12445 NZ_JAIKUA010000186.1 Protein Homology CDS 22949 23521 . - 0 ID=cds-WP_075673832.1;Parent=gene-L2557_RS12445;Dbxref=GenBank:WP_075673832.1;Name=WP_075673832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656465.1;locus_tag=L2557_RS12445;product=hypothetical protein;protein_id=WP_075673832.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 23872 24078 . - . ID=gene-L2557_RS12450;Name=L2557_RS12450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12450 NZ_JAIKUA010000186.1 GeneMarkS-2+ CDS 23872 24078 . - 0 ID=cds-WP_099660450.1;Parent=gene-L2557_RS12450;Dbxref=GenBank:WP_099660450.1;Name=WP_099660450.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS12450;product=hypothetical protein;protein_id=WP_099660450.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 24416 25411 . - . ID=gene-L2557_RS12455;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=L2557_RS12455 NZ_JAIKUA010000186.1 Protein Homology CDS 24416 25411 . - 0 ID=cds-WP_099660449.1;Parent=gene-L2557_RS12455;Dbxref=GenBank:WP_099660449.1;Name=WP_099660449.1;Ontology_term=GO:0043101,GO:0004000,GO:0019239;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA,deaminase activity|0019239||IEA;go_process=purine-containing compound salvage|0043101||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015379361.1;locus_tag=L2557_RS12455;product=adenosine deaminase;protein_id=WP_099660449.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 25548 26219 . + . ID=gene-L2557_RS12460;Name=L2557_RS12460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12460 NZ_JAIKUA010000186.1 Protein Homology CDS 25548 26219 . + 0 ID=cds-WP_083629120.1;Parent=gene-L2557_RS12460;Dbxref=GenBank:WP_083629120.1;Name=WP_083629120.1;Ontology_term=GO:0003677,GO:0030552;gbkey=CDS;go_function=DNA binding|0003677||IEA,cAMP binding|0030552||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455225.1;locus_tag=L2557_RS12460;product=Crp/Fnr family transcriptional regulator;protein_id=WP_083629120.1;transl_table=11 NZ_JAIKUA010000186.1 RefSeq gene 26258 27046 . - . ID=gene-L2557_RS12465;Name=L2557_RS12465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12465 NZ_JAIKUA010000186.1 Protein Homology CDS 26258 27046 . - 0 ID=cds-WP_235410089.1;Parent=gene-L2557_RS12465;Dbxref=GenBank:WP_235410089.1;Name=WP_235410089.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657129.1;locus_tag=L2557_RS12465;product=LEM-3-like GIY-YIG domain-containing protein;protein_id=WP_235410089.1;transl_table=11 ##sequence-region NZ_JAIKUA010000187.1 1 9438 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000187.1 RefSeq region 1 9438 . + . ID=NZ_JAIKUA010000187.1:1..9438;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000187.1 RefSeq gene 1 293 . - . ID=gene-L2557_RS12470;Name=L2557_RS12470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12470;partial=true;start_range=.,1 NZ_JAIKUA010000187.1 Protein Homology CDS 1 293 . - 0 ID=cds-WP_235410090.1;Parent=gene-L2557_RS12470;Dbxref=GenBank:WP_235410090.1;Name=WP_235410090.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004866608.1;locus_tag=L2557_RS12470;partial=true;product=MarR family transcriptional regulator;protein_id=WP_235410090.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000187.1 RefSeq gene 579 995 . + . ID=gene-L2557_RS12475;Name=L2557_RS12475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12475 NZ_JAIKUA010000187.1 GeneMarkS-2+ CDS 579 995 . + 0 ID=cds-WP_099660229.1;Parent=gene-L2557_RS12475;Dbxref=GenBank:WP_099660229.1;Name=WP_099660229.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS12475;product=Rap1a family protein;protein_id=WP_099660229.1;transl_table=11 NZ_JAIKUA010000187.1 RefSeq gene 1101 2552 . - . ID=gene-L2557_RS12480;Name=pyk;gbkey=Gene;gene=pyk;gene_biotype=protein_coding;locus_tag=L2557_RS12480 NZ_JAIKUA010000187.1 Protein Homology CDS 1101 2552 . - 0 ID=cds-WP_075672689.1;Parent=gene-L2557_RS12480;Dbxref=GenBank:WP_075672689.1;Name=WP_075672689.1;Ontology_term=GO:0006096,GO:0000287,GO:0004743,GO:0030955;gbkey=CDS;gene=pyk;go_function=magnesium ion binding|0000287||IEA,pyruvate kinase activity|0004743||IEA,potassium ion binding|0030955||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827554.1;locus_tag=L2557_RS12480;product=pyruvate kinase;protein_id=WP_075672689.1;transl_table=11 NZ_JAIKUA010000187.1 RefSeq gene 2618 3955 . - . ID=gene-L2557_RS12485;Name=L2557_RS12485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12485 NZ_JAIKUA010000187.1 Protein Homology CDS 2618 3955 . - 0 ID=cds-WP_075672688.1;Parent=gene-L2557_RS12485;Dbxref=GenBank:WP_075672688.1;Name=WP_075672688.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827553.1;locus_tag=L2557_RS12485;product=MFS transporter;protein_id=WP_075672688.1;transl_table=11 NZ_JAIKUA010000187.1 RefSeq gene 4268 5557 . + . ID=gene-L2557_RS12490;Name=L2557_RS12490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12490 NZ_JAIKUA010000187.1 Protein Homology CDS 4268 5557 . + 0 ID=cds-WP_075672687.1;Parent=gene-L2557_RS12490;Dbxref=GenBank:WP_075672687.1;Name=WP_075672687.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245630.1;locus_tag=L2557_RS12490;product=ABC transporter substrate-binding protein;protein_id=WP_075672687.1;transl_table=11 NZ_JAIKUA010000187.1 RefSeq gene 5615 7990 . + . ID=gene-L2557_RS12495;Name=L2557_RS12495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12495 NZ_JAIKUA010000187.1 Protein Homology CDS 5615 7990 . + 0 ID=cds-WP_075672686.1;Parent=gene-L2557_RS12495;Dbxref=GenBank:WP_075672686.1;Name=WP_075672686.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628540.1;locus_tag=L2557_RS12495;product=ATP-binding protein;protein_id=WP_075672686.1;transl_table=11 NZ_JAIKUA010000187.1 RefSeq gene 7968 9245 . + . ID=gene-L2557_RS12500;Name=L2557_RS12500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12500 NZ_JAIKUA010000187.1 Protein Homology CDS 7968 9245 . + 0 ID=cds-WP_099660228.1;Parent=gene-L2557_RS12500;Dbxref=GenBank:WP_099660228.1;Name=WP_099660228.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677,GO:0005524;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827552.1;locus_tag=L2557_RS12500;product=sigma-54-dependent transcriptional regulator;protein_id=WP_099660228.1;transl_table=11 NZ_JAIKUA010000187.1 RefSeq gene 9247 9438 . - . ID=gene-L2557_RS12505;Name=L2557_RS12505;end_range=9438,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12505;partial=true NZ_JAIKUA010000187.1 GeneMarkS-2+ CDS 9247 9438 . - 0 ID=cds-WP_235410092.1;Parent=gene-L2557_RS12505;Dbxref=GenBank:WP_235410092.1;Name=WP_235410092.1;end_range=9438,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS12505;partial=true;product=hypothetical protein;protein_id=WP_235410092.1;transl_table=11 ##sequence-region NZ_JAIKUA010000188.1 1 12101 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000188.1 RefSeq region 1 12101 . + . ID=NZ_JAIKUA010000188.1:1..12101;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000188.1 RefSeq gene 66 1109 . - . ID=gene-L2557_RS12510;Name=L2557_RS12510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12510 NZ_JAIKUA010000188.1 Protein Homology CDS 66 1109 . - 0 ID=cds-WP_235410093.1;Parent=gene-L2557_RS12510;Dbxref=GenBank:WP_235410093.1;Name=WP_235410093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243095.1;locus_tag=L2557_RS12510;product=YcjF family protein;protein_id=WP_235410093.1;transl_table=11 NZ_JAIKUA010000188.1 RefSeq gene 1106 2500 . - . ID=gene-L2557_RS12515;Name=L2557_RS12515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12515 NZ_JAIKUA010000188.1 Protein Homology CDS 1106 2500 . - 0 ID=cds-WP_075672161.1;Parent=gene-L2557_RS12515;Dbxref=GenBank:WP_075672161.1;Name=WP_075672161.1;Ontology_term=GO:0003924,GO:0005525,GO:0019003;gbkey=CDS;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,GDP binding|0019003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004717556.1;locus_tag=L2557_RS12515;product=YcjX family GTP-binding protein;protein_id=WP_075672161.1;transl_table=11 NZ_JAIKUA010000188.1 RefSeq gene 2481 2735 . - . ID=gene-L2557_RS12520;Name=L2557_RS12520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12520 NZ_JAIKUA010000188.1 Protein Homology CDS 2481 2735 . - 0 ID=cds-WP_223672449.1;Parent=gene-L2557_RS12520;Dbxref=GenBank:WP_223672449.1;Name=WP_223672449.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537009.1;locus_tag=L2557_RS12520;product=peptide permease;protein_id=WP_223672449.1;transl_table=11 NZ_JAIKUA010000188.1 RefSeq gene 2854 3210 . - . ID=gene-L2557_RS12525;Name=pspC;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=L2557_RS12525 NZ_JAIKUA010000188.1 Protein Homology CDS 2854 3210 . - 0 ID=cds-WP_075672163.1;Parent=gene-L2557_RS12525;Dbxref=GenBank:WP_075672163.1;Name=WP_075672163.1;gbkey=CDS;gene=pspC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243099.1;locus_tag=L2557_RS12525;product=envelope stress response membrane protein PspC;protein_id=WP_075672163.1;transl_table=11 NZ_JAIKUA010000188.1 RefSeq gene 3210 3440 . - . ID=gene-L2557_RS12530;Name=pspB;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=L2557_RS12530 NZ_JAIKUA010000188.1 Protein Homology CDS 3210 3440 . - 0 ID=cds-WP_069369279.1;Parent=gene-L2557_RS12530;Dbxref=GenBank:WP_069369279.1;Name=WP_069369279.1;Ontology_term=GO:0009271;gbkey=CDS;gene=pspB;go_process=phage shock|0009271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005161022.1;locus_tag=L2557_RS12530;product=envelope stress response membrane protein PspB;protein_id=WP_069369279.1;transl_table=11 NZ_JAIKUA010000188.1 RefSeq gene 3477 4145 . - . ID=gene-L2557_RS12535;Name=pspA;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=L2557_RS12535 NZ_JAIKUA010000188.1 Protein Homology CDS 3477 4145 . - 0 ID=cds-WP_075672165.1;Parent=gene-L2557_RS12535;Dbxref=GenBank:WP_075672165.1;Name=WP_075672165.1;gbkey=CDS;gene=pspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628083.1;locus_tag=L2557_RS12535;product=phage shock protein PspA;protein_id=WP_075672165.1;transl_table=11 NZ_JAIKUA010000188.1 RefSeq gene 4360 5355 . + . ID=gene-L2557_RS12540;Name=pspF;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=L2557_RS12540 NZ_JAIKUA010000188.1 Protein Homology CDS 4360 5355 . + 0 ID=cds-WP_099659682.1;Parent=gene-L2557_RS12540;Dbxref=GenBank:WP_099659682.1;Name=WP_099659682.1;gbkey=CDS;gene=pspF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083071.1;locus_tag=L2557_RS12540;product=phage shock protein operon transcriptional activator;protein_id=WP_099659682.1;transl_table=11 NZ_JAIKUA010000188.1 RefSeq gene 5648 7333 . + . ID=gene-L2557_RS12545;Name=sapA;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=L2557_RS12545 NZ_JAIKUA010000188.1 Protein Homology CDS 5648 7333 . + 0 ID=cds-WP_099659681.1;Parent=gene-L2557_RS12545;Dbxref=GenBank:WP_099659681.1;Name=WP_099659681.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=sapA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537018.1;locus_tag=L2557_RS12545;product=ABC transporter substrate-binding protein SapA;protein_id=WP_099659681.1;transl_table=11 NZ_JAIKUA010000188.1 RefSeq gene 7337 8302 . + . ID=gene-L2557_RS12550;Name=sapB;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=L2557_RS12550 NZ_JAIKUA010000188.1 Protein Homology CDS 7337 8302 . + 0 ID=cds-WP_099659680.1;Parent=gene-L2557_RS12550;Dbxref=GenBank:WP_099659680.1;Name=WP_099659680.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210972.1;locus_tag=L2557_RS12550;product=putrescine export ABC transporter permease SapB;protein_id=WP_099659680.1;transl_table=11 NZ_JAIKUA010000188.1 RefSeq gene 8289 9182 . + . ID=gene-L2557_RS12555;Name=sapC;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=L2557_RS12555 NZ_JAIKUA010000188.1 Protein Homology CDS 8289 9182 . + 0 ID=cds-WP_075672171.1;Parent=gene-L2557_RS12555;Dbxref=GenBank:WP_075672171.1;Name=WP_075672171.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=sapC;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019079344.1;locus_tag=L2557_RS12555;product=putrescine export ABC transporter permease SapC;protein_id=WP_075672171.1;transl_table=11 NZ_JAIKUA010000188.1 RefSeq gene 9182 10183 . + . ID=gene-L2557_RS12560;Name=sapD;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=L2557_RS12560 NZ_JAIKUA010000188.1 Protein Homology CDS 9182 10183 . + 0 ID=cds-WP_075672173.1;Parent=gene-L2557_RS12560;Dbxref=GenBank:WP_075672173.1;Name=WP_075672173.1;gbkey=CDS;gene=sapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248150.1;locus_tag=L2557_RS12560;product=putrescine export ABC transporter ATP-binding protein SapD;protein_id=WP_075672173.1;transl_table=11 NZ_JAIKUA010000188.1 RefSeq gene 10173 10982 . + . ID=gene-L2557_RS12565;Name=sapF;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=L2557_RS12565 NZ_JAIKUA010000188.1 Protein Homology CDS 10173 10982 . + 0 ID=cds-WP_075672175.1;Parent=gene-L2557_RS12565;Dbxref=GenBank:WP_075672175.1;Name=WP_075672175.1;gbkey=CDS;gene=sapF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013184548.1;locus_tag=L2557_RS12565;product=putrescine export ABC transporter ATP-binding protein SapF;protein_id=WP_075672175.1;transl_table=11 NZ_JAIKUA010000188.1 RefSeq gene 11190 11978 . + . ID=gene-L2557_RS12570;Name=fabI;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=L2557_RS12570 NZ_JAIKUA010000188.1 Protein Homology CDS 11190 11978 . + 0 ID=cds-WP_075672177.1;Parent=gene-L2557_RS12570;Dbxref=GenBank:WP_075672177.1;Name=WP_075672177.1;gbkey=CDS;gene=fabI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126472.1;locus_tag=L2557_RS12570;product=enoyl-ACP reductase FabI;protein_id=WP_075672177.1;transl_table=11 ##sequence-region NZ_JAIKUA010000189.1 1 16251 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000189.1 RefSeq region 1 16251 . + . ID=NZ_JAIKUA010000189.1:1..16251;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000189.1 RefSeq gene 38 1231 . + . ID=gene-L2557_RS12575;Name=ispC;gbkey=Gene;gene=ispC;gene_biotype=protein_coding;locus_tag=L2557_RS12575 NZ_JAIKUA010000189.1 Protein Homology CDS 38 1231 . + 0 ID=cds-WP_098942010.1;Parent=gene-L2557_RS12575;Dbxref=GenBank:WP_098942010.1;Name=WP_098942010.1;Ontology_term=GO:0008299,GO:0005515,GO:0030604,GO:0046872,GO:0070402;gbkey=CDS;gene=ispC;go_function=protein binding|0005515||IEA,1-deoxy-D-xylulose-5-phosphate reductoisomerase activity|0030604||IEA,metal ion binding|0046872||IEA,NADPH binding|0070402||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250250.1;locus_tag=L2557_RS12575;product=1-deoxy-D-xylulose-5-phosphate reductoisomerase;protein_id=WP_098942010.1;transl_table=11 NZ_JAIKUA010000189.1 RefSeq gene 1515 2216 . + . ID=gene-L2557_RS12580;Name=uppS;gbkey=Gene;gene=uppS;gene_biotype=protein_coding;locus_tag=L2557_RS12580 NZ_JAIKUA010000189.1 Protein Homology CDS 1515 2216 . + 0 ID=cds-WP_228766789.1;Parent=gene-L2557_RS12580;Dbxref=GenBank:WP_228766789.1;Name=WP_228766789.1;Ontology_term=GO:0009252,GO:0005737;gbkey=CDS;gene=uppS;go_component=cytoplasm|0005737||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248717.1;locus_tag=L2557_RS12580;product=polyprenyl diphosphate synthase;protein_id=WP_228766789.1;transl_table=11 NZ_JAIKUA010000189.1 RefSeq gene 2218 3081 . + . ID=gene-L2557_RS12585;Name=cdsA;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=L2557_RS12585 NZ_JAIKUA010000189.1 Protein Homology CDS 2218 3081 . + 0 ID=cds-WP_075671698.1;Parent=gene-L2557_RS12585;Dbxref=GenBank:WP_075671698.1;Name=WP_075671698.1;Ontology_term=GO:0016772;gbkey=CDS;gene=cdsA;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368302.1;locus_tag=L2557_RS12585;product=phosphatidate cytidylyltransferase;protein_id=WP_075671698.1;transl_table=11 NZ_JAIKUA010000189.1 RefSeq gene 3091 4443 . + . ID=gene-L2557_RS12590;Name=rseP;gbkey=Gene;gene=rseP;gene_biotype=protein_coding;locus_tag=L2557_RS12590 NZ_JAIKUA010000189.1 Protein Homology CDS 3091 4443 . + 0 ID=cds-WP_075671696.1;Parent=gene-L2557_RS12590;Dbxref=GenBank:WP_075671696.1;Name=WP_075671696.1;Ontology_term=GO:0006508,GO:0004222,GO:0005515,GO:0016020;gbkey=CDS;gene=rseP;go_component=membrane|0016020||IEA;go_function=metalloendopeptidase activity|0004222||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248715.1;locus_tag=L2557_RS12590;product=sigma E protease regulator RseP;protein_id=WP_075671696.1;transl_table=11 NZ_JAIKUA010000189.1 RefSeq gene 4483 6876 . + . ID=gene-L2557_RS12595;Name=bamA;gbkey=Gene;gene=bamA;gene_biotype=protein_coding;locus_tag=L2557_RS12595 NZ_JAIKUA010000189.1 Protein Homology CDS 4483 6876 . + 0 ID=cds-WP_099660187.1;Parent=gene-L2557_RS12595;Dbxref=GenBank:WP_099660187.1;Name=WP_099660187.1;Ontology_term=GO:0071709,GO:0009279;gbkey=CDS;gene=bamA;go_component=cell outer membrane|0009279||IEA;go_process=membrane assembly|0071709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011145056.1;locus_tag=L2557_RS12595;product=outer membrane protein assembly factor BamA;protein_id=WP_099660187.1;transl_table=11 NZ_JAIKUA010000189.1 RefSeq gene 6969 7466 . + . ID=gene-L2557_RS12600;Name=L2557_RS12600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12600 NZ_JAIKUA010000189.1 Protein Homology CDS 6969 7466 . + 0 ID=cds-WP_036934019.1;Parent=gene-L2557_RS12600;Dbxref=GenBank:WP_036934019.1;Name=WP_036934019.1;Ontology_term=GO:0051082;gbkey=CDS;go_function=unfolded protein binding|0051082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003852644.1;locus_tag=L2557_RS12600;product=OmpH family outer membrane protein;protein_id=WP_036934019.1;transl_table=11 NZ_JAIKUA010000189.1 RefSeq gene 7470 8498 . + . ID=gene-L2557_RS12605;Name=lpxD;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=L2557_RS12605 NZ_JAIKUA010000189.1 Protein Homology CDS 7470 8498 . + 0 ID=cds-WP_075671692.1;Parent=gene-L2557_RS12605;Dbxref=GenBank:WP_075671692.1;Name=WP_075671692.1;Ontology_term=GO:0009245,GO:0016410;gbkey=CDS;gene=lpxD;go_function=N-acyltransferase activity|0016410||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368299.1;locus_tag=L2557_RS12605;product=UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase;protein_id=WP_075671692.1;transl_table=11 NZ_JAIKUA010000189.1 RefSeq gene 8622 9074 . + . ID=gene-L2557_RS12610;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=L2557_RS12610 NZ_JAIKUA010000189.1 Protein Homology CDS 8622 9074 . + 0 ID=cds-WP_006535887.1;Parent=gene-L2557_RS12610;Dbxref=GenBank:WP_006535887.1;Name=WP_006535887.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245462.1;locus_tag=L2557_RS12610;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_006535887.1;transl_table=11 NZ_JAIKUA010000189.1 RefSeq gene 9078 9881 . + . ID=gene-L2557_RS12615;Name=lpxA;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=L2557_RS12615 NZ_JAIKUA010000189.1 Protein Homology CDS 9078 9881 . + 0 ID=cds-WP_075671690.1;Parent=gene-L2557_RS12615;Dbxref=GenBank:WP_075671690.1;Name=WP_075671690.1;Ontology_term=GO:0008610,GO:0008780;gbkey=CDS;gene=lpxA;go_function=acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity|0008780||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132096.1;locus_tag=L2557_RS12615;product=acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase;protein_id=WP_075671690.1;transl_table=11 NZ_JAIKUA010000189.1 RefSeq gene 9889 11061 . + . ID=gene-L2557_RS12620;Name=lpxB;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=L2557_RS12620 NZ_JAIKUA010000189.1 Protein Homology CDS 9889 11061 . + 0 ID=cds-WP_075671688.1;Parent=gene-L2557_RS12620;Dbxref=GenBank:WP_075671688.1;Name=WP_075671688.1;Ontology_term=GO:0009245,GO:0008915;gbkey=CDS;gene=lpxB;go_function=lipid-A-disaccharide synthase activity|0008915||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628592.1;locus_tag=L2557_RS12620;product=lipid-A-disaccharide synthase;protein_id=WP_075671688.1;transl_table=11 NZ_JAIKUA010000189.1 RefSeq gene 11061 11651 . + . ID=gene-L2557_RS12625;Name=rnhB;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=L2557_RS12625 NZ_JAIKUA010000189.1 Protein Homology CDS 11061 11651 . + 0 ID=cds-WP_075671686.1;Parent=gene-L2557_RS12625;Dbxref=GenBank:WP_075671686.1;Name=WP_075671686.1;Ontology_term=GO:0003723,GO:0004523;gbkey=CDS;gene=rnhB;go_function=RNA binding|0003723||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662995.1;locus_tag=L2557_RS12625;product=ribonuclease HII;protein_id=WP_075671686.1;transl_table=11 NZ_JAIKUA010000189.1 RefSeq gene 11673 15155 . + . ID=gene-L2557_RS12630;Name=dnaE;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=L2557_RS12630 NZ_JAIKUA010000189.1 Protein Homology CDS 11673 15155 . + 0 ID=cds-WP_075671684.1;Parent=gene-L2557_RS12630;Dbxref=GenBank:WP_075671684.1;Name=WP_075671684.1;Ontology_term=GO:0006260,GO:0003676,GO:0008408;gbkey=CDS;gene=dnaE;go_function=nucleic acid binding|0003676||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459236.1;locus_tag=L2557_RS12630;product=DNA polymerase III subunit alpha;protein_id=WP_075671684.1;transl_table=11 NZ_JAIKUA010000189.1 RefSeq gene 15168 16127 . + . ID=gene-L2557_RS12635;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=L2557_RS12635 NZ_JAIKUA010000189.1 Protein Homology CDS 15168 16127 . + 0 ID=cds-WP_075671682.1;Parent=gene-L2557_RS12635;Dbxref=GenBank:WP_075671682.1;Name=WP_075671682.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455765.1;locus_tag=L2557_RS12635;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_075671682.1;transl_table=11 ##sequence-region NZ_JAIKUA010000019.1 1 18131 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000019.1 RefSeq region 1 18131 . + . ID=NZ_JAIKUA010000019.1:1..18131;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000019.1 RefSeq gene 1 1975 . - . ID=gene-L2557_RS02040;Name=L2557_RS02040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02040;partial=true;start_range=.,1 NZ_JAIKUA010000019.1 Protein Homology CDS 1 1975 . - 0 ID=cds-WP_235409751.1;Parent=gene-L2557_RS02040;Dbxref=GenBank:WP_235409751.1;Name=WP_235409751.1;Ontology_term=GO:0009307,GO:0003677,GO:0008168,GO:1904047;gbkey=CDS;go_function=DNA binding|0003677||IEA,methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=DNA restriction-modification system|0009307||IEA;inference=COORDINATES: protein motif:HMM:NF014442.6;locus_tag=L2557_RS02040;partial=true;product=HsdM family class I SAM-dependent methyltransferase;protein_id=WP_235409751.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000019.1 RefSeq gene 1991 2212 . - . ID=gene-L2557_RS02045;Name=L2557_RS02045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02045 NZ_JAIKUA010000019.1 Protein Homology CDS 1991 2212 . - 0 ID=cds-WP_235409753.1;Parent=gene-L2557_RS02045;Dbxref=GenBank:WP_235409753.1;Name=WP_235409753.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF039792.5;locus_tag=L2557_RS02045;product=DUF6471 domain-containing protein;protein_id=WP_235409753.1;transl_table=11 NZ_JAIKUA010000019.1 RefSeq gene 2875 5535 . - . ID=gene-L2557_RS02050;Name=L2557_RS02050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02050 NZ_JAIKUA010000019.1 Protein Homology CDS 2875 5535 . - 0 ID=cds-WP_235409754.1;Parent=gene-L2557_RS02050;Dbxref=GenBank:WP_235409754.1;Name=WP_235409754.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813052.1;locus_tag=L2557_RS02050;product=toprim domain-containing protein;protein_id=WP_235409754.1;transl_table=11 NZ_JAIKUA010000019.1 RefSeq gene 5612 5833 . - . ID=gene-L2557_RS02055;Name=L2557_RS02055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02055 NZ_JAIKUA010000019.1 Protein Homology CDS 5612 5833 . - 0 ID=cds-WP_066745392.1;Parent=gene-L2557_RS02055;Dbxref=GenBank:WP_066745392.1;Name=WP_066745392.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254739.1;locus_tag=L2557_RS02055;product=TraR/DksA family transcriptional regulator;protein_id=WP_066745392.1;transl_table=11 NZ_JAIKUA010000019.1 RefSeq gene 5826 6047 . - . ID=gene-L2557_RS02060;Name=L2557_RS02060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02060 NZ_JAIKUA010000019.1 Protein Homology CDS 5826 6047 . - 0 ID=cds-WP_235409755.1;Parent=gene-L2557_RS02060;Dbxref=GenBank:WP_235409755.1;Name=WP_235409755.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254744.1;locus_tag=L2557_RS02060;product=hypothetical protein;protein_id=WP_235409755.1;transl_table=11 NZ_JAIKUA010000019.1 RefSeq gene 6247 6696 . + . ID=gene-L2557_RS02065;Name=L2557_RS02065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02065 NZ_JAIKUA010000019.1 GeneMarkS-2+ CDS 6247 6696 . + 0 ID=cds-WP_210813711.1;Parent=gene-L2557_RS02065;Dbxref=GenBank:WP_210813711.1;Name=WP_210813711.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS02065;product=hypothetical protein;protein_id=WP_210813711.1;transl_table=11 NZ_JAIKUA010000019.1 RefSeq gene 6701 7009 . - . ID=gene-L2557_RS02070;Name=L2557_RS02070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02070 NZ_JAIKUA010000019.1 GeneMarkS-2+ CDS 6701 7009 . - 0 ID=cds-WP_099432914.1;Parent=gene-L2557_RS02070;Dbxref=GenBank:WP_099432914.1;Name=WP_099432914.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS02070;product=hypothetical protein;protein_id=WP_099432914.1;transl_table=11 NZ_JAIKUA010000019.1 RefSeq gene 6999 7190 . - . ID=gene-L2557_RS02075;Name=L2557_RS02075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02075 NZ_JAIKUA010000019.1 Protein Homology CDS 6999 7190 . - 0 ID=cds-WP_235409756.1;Parent=gene-L2557_RS02075;Dbxref=GenBank:WP_235409756.1;Name=WP_235409756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004254754.1;locus_tag=L2557_RS02075;product=hypothetical protein;protein_id=WP_235409756.1;transl_table=11 NZ_JAIKUA010000019.1 RefSeq gene 7187 7447 . - . ID=gene-L2557_RS02080;Name=L2557_RS02080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02080 NZ_JAIKUA010000019.1 Protein Homology CDS 7187 7447 . - 0 ID=cds-WP_099432912.1;Parent=gene-L2557_RS02080;Dbxref=GenBank:WP_099432912.1;Name=WP_099432912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536687.1;locus_tag=L2557_RS02080;product=Cox family DNA-binding protein;protein_id=WP_099432912.1;transl_table=11 NZ_JAIKUA010000019.1 RefSeq gene 7550 7849 . + . ID=gene-L2557_RS02085;Name=L2557_RS02085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02085 NZ_JAIKUA010000019.1 Protein Homology CDS 7550 7849 . + 0 ID=cds-WP_235409757.1;Parent=gene-L2557_RS02085;Dbxref=GenBank:WP_235409757.1;Name=WP_235409757.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001389238.1;locus_tag=L2557_RS02085;product=helix-turn-helix domain-containing protein;protein_id=WP_235409757.1;transl_table=11 NZ_JAIKUA010000019.1 RefSeq gene 7916 8905 . + . ID=gene-L2557_RS02090;Name=L2557_RS02090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02090 NZ_JAIKUA010000019.1 Protein Homology CDS 7916 8905 . + 0 ID=cds-WP_235409758.1;Parent=gene-L2557_RS02090;Dbxref=GenBank:WP_235409758.1;Name=WP_235409758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839012.1;locus_tag=L2557_RS02090;product=phage integrase;protein_id=WP_235409758.1;transl_table=11 NZ_JAIKUA010000019.1 RefSeq gene 9037 10602 . - . ID=gene-L2557_RS02095;Name=ahpF;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=L2557_RS02095 NZ_JAIKUA010000019.1 Protein Homology CDS 9037 10602 . - 0 ID=cds-WP_075673632.1;Parent=gene-L2557_RS02095;Dbxref=GenBank:WP_075673632.1;Name=WP_075673632.1;Ontology_term=GO:0000302,GO:0008785,GO:0050660,GO:0051287;gbkey=CDS;gene=ahpF;go_function=alkyl hydroperoxide reductase activity|0008785||IEA,flavin adenine dinucleotide binding|0050660||IEA,NAD binding|0051287||IEA;go_process=response to reactive oxygen species|0000302||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628129.1;locus_tag=L2557_RS02095;product=alkyl hydroperoxide reductase subunit F;protein_id=WP_075673632.1;transl_table=11 NZ_JAIKUA010000019.1 RefSeq gene 10672 11235 . - . ID=gene-L2557_RS02100;Name=ahpC;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=L2557_RS02100 NZ_JAIKUA010000019.1 Protein Homology CDS 10672 11235 . - 0 ID=cds-WP_006536680.1;Parent=gene-L2557_RS02100;Dbxref=GenBank:WP_006536680.1;Name=WP_006536680.1;Ontology_term=GO:0006979,GO:0102039;gbkey=CDS;gene=ahpC;go_function=NADH-dependent peroxiredoxin activity|0102039||IEA;go_process=response to oxidative stress|0006979||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1;locus_tag=L2557_RS02100;product=alkyl hydroperoxide reductase subunit C;protein_id=WP_006536680.1;transl_table=11 NZ_JAIKUA010000019.1 RefSeq gene 11515 12165 . - . ID=gene-L2557_RS02105;Name=L2557_RS02105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02105 NZ_JAIKUA010000019.1 Protein Homology CDS 11515 12165 . - 0 ID=cds-WP_231039556.1;Parent=gene-L2557_RS02105;Dbxref=GenBank:WP_231039556.1;Name=WP_231039556.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248027.1;locus_tag=L2557_RS02105;product=hypothetical protein;protein_id=WP_231039556.1;transl_table=11 NZ_JAIKUA010000019.1 RefSeq gene 12480 14003 . - . ID=gene-L2557_RS02110;Name=L2557_RS02110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02110 NZ_JAIKUA010000019.1 Protein Homology CDS 12480 14003 . - 0 ID=cds-WP_156733446.1;Parent=gene-L2557_RS02110;Dbxref=GenBank:WP_156733446.1;Name=WP_156733446.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012822510.1;locus_tag=L2557_RS02110;product=carbohydrate porin;protein_id=WP_156733446.1;transl_table=11 NZ_JAIKUA010000019.1 RefSeq gene 14680 14835 . - . ID=gene-L2557_RS02115;Name=L2557_RS02115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02115 NZ_JAIKUA010000019.1 Protein Homology CDS 14680 14835 . - 0 ID=cds-WP_164530186.1;Parent=gene-L2557_RS02115;Dbxref=GenBank:WP_164530186.1;Name=WP_164530186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242841.1;locus_tag=L2557_RS02115;product=hypothetical protein;protein_id=WP_164530186.1;transl_table=11 NZ_JAIKUA010000019.1 RefSeq gene 14828 15664 . - . ID=gene-L2557_RS02120;Name=L2557_RS02120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02120 NZ_JAIKUA010000019.1 Protein Homology CDS 14828 15664 . - 0 ID=cds-WP_099660379.1;Parent=gene-L2557_RS02120;Dbxref=GenBank:WP_099660379.1;Name=WP_099660379.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827809.1;locus_tag=L2557_RS02120;product=PadR family transcriptional regulator;protein_id=WP_099660379.1;transl_table=11 NZ_JAIKUA010000019.1 RefSeq gene 16088 17926 . - . ID=gene-L2557_RS02125;Name=L2557_RS02125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02125 NZ_JAIKUA010000019.1 Protein Homology CDS 16088 17926 . - 0 ID=cds-WP_099660378.1;Parent=gene-L2557_RS02125;Dbxref=GenBank:WP_099660378.1;Name=WP_099660378.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242838.1;locus_tag=L2557_RS02125;product=tyrosine decarboxylase;protein_id=WP_099660378.1;transl_table=11 ##sequence-region NZ_JAIKUA010000190.1 1 27387 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000190.1 RefSeq region 1 27387 . + . ID=NZ_JAIKUA010000190.1:1..27387;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000190.1 RefSeq gene 207 2915 . + . ID=gene-L2557_RS12640;Name=rcsD;gbkey=Gene;gene=rcsD;gene_biotype=protein_coding;locus_tag=L2557_RS12640 NZ_JAIKUA010000190.1 Protein Homology CDS 207 2915 . + 0 ID=cds-WP_075670688.1;Parent=gene-L2557_RS12640;Dbxref=GenBank:WP_075670688.1;Name=WP_075670688.1;Ontology_term=GO:0000160,GO:0009927,GO:0005886;gbkey=CDS;gene=rcsD;go_component=plasma membrane|0005886||IEA;go_function=histidine phosphotransfer kinase activity|0009927||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243645.1;locus_tag=L2557_RS12640;product=phosphotransferase RcsD;protein_id=WP_075670688.1;transl_table=11 NZ_JAIKUA010000190.1 RefSeq gene 2918 3574 . + . ID=gene-L2557_RS12645;Name=rcsB;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=L2557_RS12645 NZ_JAIKUA010000190.1 Protein Homology CDS 2918 3574 . + 0 ID=cds-WP_006533269.1;Parent=gene-L2557_RS12645;Dbxref=GenBank:WP_006533269.1;Name=WP_006533269.1;gbkey=CDS;gene=rcsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533269.1;locus_tag=L2557_RS12645;product=response regulator transcription factor RcsB;protein_id=WP_006533269.1;transl_table=11 NZ_JAIKUA010000190.1 RefSeq gene 3971 6805 . - . ID=gene-L2557_RS12650;Name=rcsC;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=L2557_RS12650 NZ_JAIKUA010000190.1 Protein Homology CDS 3971 6805 . - 0 ID=cds-WP_075670686.1;Parent=gene-L2557_RS12650;Dbxref=GenBank:WP_075670686.1;Name=WP_075670686.1;Ontology_term=GO:0000160,GO:0006355,GO:0018106,GO:0000155,GO:0005524,GO:0016020;gbkey=CDS;gene=rcsC;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,ATP binding|0005524||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,peptidyl-histidine phosphorylation|0018106||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004240091.1;locus_tag=L2557_RS12650;product=two-component system sensor histidine kinase RcsC;protein_id=WP_075670686.1;transl_table=11 NZ_JAIKUA010000190.1 RefSeq gene 6998 9625 . - . ID=gene-L2557_RS12655;Name=gyrA;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=L2557_RS12655 NZ_JAIKUA010000190.1 Protein Homology CDS 6998 9625 . - 0 ID=cds-WP_075670684.1;Parent=gene-L2557_RS12655;Dbxref=GenBank:WP_075670684.1;Name=WP_075670684.1;Ontology_term=GO:0006265,GO:0003916,GO:0003918,GO:0009330;gbkey=CDS;gene=gyrA;go_component=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) complex|0009330||IEA;go_function=DNA topoisomerase activity|0003916||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248375.1;locus_tag=L2557_RS12655;product=DNA topoisomerase (ATP-hydrolyzing) subunit A;protein_id=WP_075670684.1;transl_table=11 NZ_JAIKUA010000190.1 RefSeq gene 9798 10535 . + . ID=gene-L2557_RS12660;Name=ubiG;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=L2557_RS12660 NZ_JAIKUA010000190.1 Protein Homology CDS 9798 10535 . + 0 ID=cds-WP_075670682.1;Parent=gene-L2557_RS12660;Dbxref=GenBank:WP_075670682.1;Name=WP_075670682.1;Ontology_term=GO:0006744,GO:0061542;gbkey=CDS;gene=ubiG;go_function=3-demethylubiquinol 3-O-methyltransferase activity|0061542||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243650.1;locus_tag=L2557_RS12660;product=bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG;protein_id=WP_075670682.1;transl_table=11 NZ_JAIKUA010000190.1 RefSeq gene 10884 13175 . + . ID=gene-L2557_RS12665;Name=nrdA;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=L2557_RS12665 NZ_JAIKUA010000190.1 Protein Homology CDS 10884 13175 . + 0 ID=cds-WP_075670678.1;Parent=gene-L2557_RS12665;Dbxref=GenBank:WP_075670678.1;Name=WP_075670678.1;Ontology_term=GO:0006260,GO:0004748,GO:0005524;gbkey=CDS;gene=nrdA;go_function=ribonucleoside-diphosphate reductase activity%2C thioredoxin disulfide as acceptor|0004748||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461219.1;locus_tag=L2557_RS12665;product=class 1a ribonucleoside-diphosphate reductase subunit alpha;protein_id=WP_075670678.1;transl_table=11 NZ_JAIKUA010000190.1 RefSeq gene 13187 14317 . + . ID=gene-L2557_RS12670;Name=nrdB;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=L2557_RS12670 NZ_JAIKUA010000190.1 Protein Homology CDS 13187 14317 . + 0 ID=cds-WP_075670676.1;Parent=gene-L2557_RS12670;Dbxref=GenBank:WP_075670676.1;Name=WP_075670676.1;Ontology_term=GO:0009263,GO:0016491;gbkey=CDS;gene=nrdB;go_function=oxidoreductase activity|0016491||IEA;go_process=deoxyribonucleotide biosynthetic process|0009263||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006683700.1;locus_tag=L2557_RS12670;product=class Ia ribonucleoside-diphosphate reductase subunit beta;protein_id=WP_075670676.1;transl_table=11 NZ_JAIKUA010000190.1 RefSeq gene 14343 14621 . + . ID=gene-L2557_RS12675;Name=yfaE;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=L2557_RS12675 NZ_JAIKUA010000190.1 Protein Homology CDS 14343 14621 . + 0 ID=cds-WP_075670674.1;Parent=gene-L2557_RS12675;Dbxref=GenBank:WP_075670674.1;Name=WP_075670674.1;Ontology_term=GO:0051537;gbkey=CDS;gene=yfaE;go_function=2 iron%2C 2 sulfur cluster binding|0051537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248377.1;locus_tag=L2557_RS12675;product=class I ribonucleotide reductase maintenance protein YfaE;protein_id=WP_075670674.1;transl_table=11 NZ_JAIKUA010000190.1 RefSeq gene 14712 14945 . + . ID=gene-L2557_RS12680;Name=L2557_RS12680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12680 NZ_JAIKUA010000190.1 Protein Homology CDS 14712 14945 . + 0 ID=cds-WP_036935606.1;Parent=gene-L2557_RS12680;Dbxref=GenBank:WP_036935606.1;Name=WP_036935606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243656.1;locus_tag=L2557_RS12680;product=YgdI/YgdR family lipoprotein;protein_id=WP_036935606.1;transl_table=11 NZ_JAIKUA010000190.1 RefSeq gene 15127 16338 . + . ID=gene-L2557_RS12685;Name=tyrP;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=L2557_RS12685 NZ_JAIKUA010000190.1 Protein Homology CDS 15127 16338 . + 0 ID=cds-WP_075670672.1;Parent=gene-L2557_RS12685;Dbxref=GenBank:WP_075670672.1;Name=WP_075670672.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=tyrP;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533279.1;locus_tag=L2557_RS12685;product=tyrosine transporter TyrP;protein_id=WP_075670672.1;transl_table=11 NZ_JAIKUA010000190.1 RefSeq gene 16430 16972 . - . ID=gene-L2557_RS12690;Name=L2557_RS12690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12690 NZ_JAIKUA010000190.1 Protein Homology CDS 16430 16972 . - 0 ID=cds-WP_075670670.1;Parent=gene-L2557_RS12690;Dbxref=GenBank:WP_075670670.1;Name=WP_075670670.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248380.1;locus_tag=L2557_RS12690;product=YfaZ family outer membrane protein;protein_id=WP_075670670.1;transl_table=11 NZ_JAIKUA010000190.1 RefSeq gene 17257 18711 . + . ID=gene-L2557_RS12695;Name=L2557_RS12695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12695 NZ_JAIKUA010000190.1 Protein Homology CDS 17257 18711 . + 0 ID=cds-WP_099659414.1;Parent=gene-L2557_RS12695;Dbxref=GenBank:WP_099659414.1;Name=WP_099659414.1;Ontology_term=GO:0004096,GO:0020037,GO:0046872;gbkey=CDS;go_function=catalase activity|0004096||IEA,heme binding|0020037||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248382.1;locus_tag=L2557_RS12695;product=catalase;protein_id=WP_099659414.1;transl_table=11 NZ_JAIKUA010000190.1 RefSeq gene 18782 20212 . - . ID=gene-L2557_RS12700;Name=menE;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=L2557_RS12700 NZ_JAIKUA010000190.1 Protein Homology CDS 18782 20212 . - 0 ID=cds-WP_223673561.1;Parent=gene-L2557_RS12700;Dbxref=GenBank:WP_223673561.1;Name=WP_223673561.1;Ontology_term=GO:0009234,GO:0005524,GO:0008756;gbkey=CDS;gene=menE;go_function=ATP binding|0005524||IEA,o-succinylbenzoate-CoA ligase activity|0008756||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533283.1;locus_tag=L2557_RS12700;product=o-succinylbenzoate--CoA ligase;protein_id=WP_223673561.1;transl_table=11 NZ_JAIKUA010000190.1 RefSeq gene 20200 21171 . - . ID=gene-L2557_RS12705;Name=menC;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=L2557_RS12705 NZ_JAIKUA010000190.1 Protein Homology CDS 20200 21171 . - 0 ID=cds-WP_223673560.1;Parent=gene-L2557_RS12705;Dbxref=GenBank:WP_223673560.1;Name=WP_223673560.1;Ontology_term=GO:0009234,GO:0000287,GO:0016836;gbkey=CDS;gene=menC;go_function=magnesium ion binding|0000287||IEA,hydro-lyase activity|0016836||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628003.1;locus_tag=L2557_RS12705;product=o-succinylbenzoate synthase;protein_id=WP_223673560.1;transl_table=11 NZ_JAIKUA010000190.1 RefSeq gene 21171 22028 . - . ID=gene-L2557_RS12710;Name=menB;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=L2557_RS12710 NZ_JAIKUA010000190.1 Protein Homology CDS 21171 22028 . - 0 ID=cds-WP_075670662.1;Parent=gene-L2557_RS12710;Dbxref=GenBank:WP_075670662.1;Name=WP_075670662.1;Ontology_term=GO:0009234,GO:0008935;gbkey=CDS;gene=menB;go_function=1%2C4-dihydroxy-2-naphthoyl-CoA synthase activity|0008935||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001641973.1;locus_tag=L2557_RS12710;product=1%2C4-dihydroxy-2-naphthoyl-CoA synthase;protein_id=WP_075670662.1;transl_table=11 NZ_JAIKUA010000190.1 RefSeq gene 22041 22808 . - . ID=gene-L2557_RS12715;Name=menH;gbkey=Gene;gene=menH;gene_biotype=protein_coding;locus_tag=L2557_RS12715 NZ_JAIKUA010000190.1 Protein Homology CDS 22041 22808 . - 0 ID=cds-WP_075670660.1;Parent=gene-L2557_RS12715;Dbxref=GenBank:WP_075670660.1;Name=WP_075670660.1;Ontology_term=GO:0009234,GO:0070205;gbkey=CDS;gene=menH;go_function=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase activity|0070205||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248384.1;locus_tag=L2557_RS12715;product=2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase;protein_id=WP_075670660.1;transl_table=11 NZ_JAIKUA010000190.1 RefSeq gene 22783 24477 . - . ID=gene-L2557_RS12720;Name=menD;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=L2557_RS12720 NZ_JAIKUA010000190.1 Protein Homology CDS 22783 24477 . - 0 ID=cds-WP_235410094.1;Parent=gene-L2557_RS12720;Dbxref=GenBank:WP_235410094.1;Name=WP_235410094.1;Ontology_term=GO:0009234,GO:0030976,GO:0070204;gbkey=CDS;gene=menD;go_function=thiamine pyrophosphate binding|0030976||IEA,2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity|0070204||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533288.1;locus_tag=L2557_RS12720;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase;protein_id=WP_235410094.1;transl_table=11 NZ_JAIKUA010000190.1 RefSeq gene 24829 26160 . - . ID=gene-L2557_RS12725;Name=L2557_RS12725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12725 NZ_JAIKUA010000190.1 Protein Homology CDS 24829 26160 . - 0 ID=cds-WP_099659411.1;Parent=gene-L2557_RS12725;Dbxref=GenBank:WP_099659411.1;Name=WP_099659411.1;Ontology_term=GO:0009234,GO:0008909,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isochorismate synthase activity|0008909||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243673.1;locus_tag=L2557_RS12725;product=isochorismate synthase;protein_id=WP_099659411.1;transl_table=11 NZ_JAIKUA010000190.1 RefSeq gene 26373 27387 . + . ID=gene-L2557_RS12730;Name=L2557_RS12730;end_range=27387,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12730;partial=true NZ_JAIKUA010000190.1 Protein Homology CDS 26373 27387 . + 0 ID=cds-WP_235410098.1;Parent=gene-L2557_RS12730;Dbxref=GenBank:WP_235410098.1;Name=WP_235410098.1;Ontology_term=GO:0046930;end_range=27387,.;gbkey=CDS;go_component=pore complex|0046930||IEA;inference=COORDINATES: protein motif:HMM:NF033928.1;locus_tag=L2557_RS12730;partial=true;product=alpha-xenorhabdolysin family binary toxin subunit A;protein_id=WP_235410098.1;transl_table=11 ##sequence-region NZ_JAIKUA010000191.1 1 363 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000191.1 RefSeq region 1 363 . + . ID=NZ_JAIKUA010000191.1:1..363;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000191.1 RefSeq gene 1 363 . + . ID=gene-L2557_RS12735;Name=L2557_RS12735;end_range=363,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12735;partial=true;start_range=.,1 NZ_JAIKUA010000191.1 Protein Homology CDS 1 363 . + 0 ID=cds-WP_235410104.1;Parent=gene-L2557_RS12735;Dbxref=GenBank:WP_235410104.1;Name=WP_235410104.1;end_range=363,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910448.1;locus_tag=L2557_RS12735;partial=true;product=hypothetical protein;protein_id=WP_235410104.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000192.1 1 2551 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000192.1 RefSeq region 1 2551 . + . ID=NZ_JAIKUA010000192.1:1..2551;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000192.1 RefSeq gene 19 885 . - . ID=gene-L2557_RS12740;Name=L2557_RS12740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12740 NZ_JAIKUA010000192.1 Protein Homology CDS 19 885 . - 0 ID=cds-WP_099660240.1;Parent=gene-L2557_RS12740;Dbxref=GenBank:WP_099660240.1;Name=WP_099660240.1;Ontology_term=GO:0051539,GO:1904047;gbkey=CDS;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250178.1;locus_tag=L2557_RS12740;product=YjjW family glycine radical enzyme activase;protein_id=WP_099660240.1;transl_table=11 NZ_JAIKUA010000192.1 RefSeq gene 857 2398 . - . ID=gene-L2557_RS12745;Name=L2557_RS12745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12745 NZ_JAIKUA010000192.1 Protein Homology CDS 857 2398 . - 0 ID=cds-WP_099660239.1;Parent=gene-L2557_RS12745;Dbxref=GenBank:WP_099660239.1;Name=WP_099660239.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368413.1;locus_tag=L2557_RS12745;product=YjjI family glycine radical enzyme;protein_id=WP_099660239.1;transl_table=11 ##sequence-region NZ_JAIKUA010000193.1 1 26290 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000193.1 RefSeq region 1 26290 . + . ID=NZ_JAIKUA010000193.1:1..26290;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000193.1 RefSeq gene 1 453 . + . ID=gene-L2557_RS12750;Name=L2557_RS12750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12750;partial=true;start_range=.,1 NZ_JAIKUA010000193.1 Protein Homology CDS 1 453 . + 0 ID=cds-WP_235410108.1;Parent=gene-L2557_RS12750;Dbxref=GenBank:WP_235410108.1;Name=WP_235410108.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF046806.2;locus_tag=L2557_RS12750;partial=true;product=Gfo/Idh/MocA family protein;protein_id=WP_235410108.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000193.1 RefSeq pseudogene 469 1667 . + . ID=gene-L2557_RS12755;Name=L2557_RS12755;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS12755;pseudo=true NZ_JAIKUA010000193.1 Protein Homology CDS 469 1667 . + 0 ID=cds-L2557_RS12755;Parent=gene-L2557_RS12755;Note=frameshifted;Ontology_term=GO:0008483;gbkey=CDS;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: protein motif:HMM:NF013227.6;locus_tag=L2557_RS12755;product=DegT/DnrJ/EryC1/StrS family aminotransferase;pseudo=true;transl_table=11 NZ_JAIKUA010000193.1 RefSeq gene 1664 2095 . + . ID=gene-L2557_RS12760;Name=L2557_RS12760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12760 NZ_JAIKUA010000193.1 Protein Homology CDS 1664 2095 . + 0 ID=cds-WP_099659796.1;Parent=gene-L2557_RS12760;Dbxref=GenBank:WP_099659796.1;Name=WP_099659796.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010618524.1;locus_tag=L2557_RS12760;product=NUDIX domain-containing protein;protein_id=WP_099659796.1;transl_table=11 NZ_JAIKUA010000193.1 RefSeq gene 2169 2936 . - . ID=gene-L2557_RS12765;Name=moeB;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=L2557_RS12765 NZ_JAIKUA010000193.1 Protein Homology CDS 2169 2936 . - 0 ID=cds-WP_099659795.1;Parent=gene-L2557_RS12765;Dbxref=GenBank:WP_099659795.1;Name=WP_099659795.1;Ontology_term=GO:0006777,GO:0008641;gbkey=CDS;gene=moeB;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537554.1;locus_tag=L2557_RS12765;product=molybdopterin-synthase adenylyltransferase MoeB;protein_id=WP_099659795.1;transl_table=11 NZ_JAIKUA010000193.1 RefSeq gene 2942 4183 . - . ID=gene-L2557_RS12770;Name=moeA;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=L2557_RS12770 NZ_JAIKUA010000193.1 Protein Homology CDS 2942 4183 . - 0 ID=cds-WP_099659794.1;Parent=gene-L2557_RS12770;Dbxref=GenBank:WP_099659794.1;Name=WP_099659794.1;Ontology_term=GO:0006777,GO:0032324;gbkey=CDS;gene=moeA;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA,molybdopterin cofactor biosynthetic process|0032324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247583.1;locus_tag=L2557_RS12770;product=molybdopterin molybdotransferase MoeA;protein_id=WP_099659794.1;transl_table=11 NZ_JAIKUA010000193.1 RefSeq gene 4393 5562 . + . ID=gene-L2557_RS12775;Name=L2557_RS12775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12775 NZ_JAIKUA010000193.1 Protein Homology CDS 4393 5562 . + 0 ID=cds-WP_099659793.1;Parent=gene-L2557_RS12775;Dbxref=GenBank:WP_099659793.1;Name=WP_099659793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013183879.1;locus_tag=L2557_RS12775;product=YbfB/YjiJ family MFS transporter;protein_id=WP_099659793.1;transl_table=11 NZ_JAIKUA010000193.1 RefSeq gene 5711 6370 . + . ID=gene-L2557_RS12780;Name=folE;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=L2557_RS12780 NZ_JAIKUA010000193.1 Protein Homology CDS 5711 6370 . + 0 ID=cds-WP_023581251.1;Parent=gene-L2557_RS12780;Dbxref=GenBank:WP_023581251.1;Name=WP_023581251.1;Ontology_term=GO:0046654,GO:0003934;gbkey=CDS;gene=folE;go_function=GTP cyclohydrolase I activity|0003934||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660151.1;locus_tag=L2557_RS12780;product=GTP cyclohydrolase I FolE;protein_id=WP_023581251.1;transl_table=11 NZ_JAIKUA010000193.1 RefSeq gene 6386 7537 . + . ID=gene-L2557_RS12785;Name=yeiB;gbkey=Gene;gene=yeiB;gene_biotype=protein_coding;locus_tag=L2557_RS12785 NZ_JAIKUA010000193.1 Protein Homology CDS 6386 7537 . + 0 ID=cds-WP_099659792.1;Parent=gene-L2557_RS12785;Dbxref=GenBank:WP_099659792.1;Name=WP_099659792.1;gbkey=CDS;gene=yeiB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827740.1;locus_tag=L2557_RS12785;product=DUF418 domain-containing protein YeiB;protein_id=WP_099659792.1;transl_table=11 NZ_JAIKUA010000193.1 RefSeq gene 7534 8265 . - . ID=gene-L2557_RS12790;Name=sanA;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=L2557_RS12790 NZ_JAIKUA010000193.1 Protein Homology CDS 7534 8265 . - 0 ID=cds-WP_075672542.1;Parent=gene-L2557_RS12790;Dbxref=GenBank:WP_075672542.1;Name=WP_075672542.1;gbkey=CDS;gene=sanA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244506.1;locus_tag=L2557_RS12790;product=outer membrane permeability protein SanA;protein_id=WP_075672542.1;transl_table=11 NZ_JAIKUA010000193.1 RefSeq gene 8407 10104 . - . ID=gene-L2557_RS12795;Name=L2557_RS12795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12795 NZ_JAIKUA010000193.1 Protein Homology CDS 8407 10104 . - 0 ID=cds-WP_075672541.1;Parent=gene-L2557_RS12795;Dbxref=GenBank:WP_075672541.1;Name=WP_075672541.1;Ontology_term=GO:0004470,GO:0004471,GO:0046872,GO:0051287;gbkey=CDS;go_function=malic enzyme activity|0004470||IEA,malate dehydrogenase (decarboxylating) (NAD+) activity|0004471||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015835025.1;locus_tag=L2557_RS12795;product=NAD-dependent malic enzyme;protein_id=WP_075672541.1;transl_table=11 NZ_JAIKUA010000193.1 RefSeq gene 10318 11202 . - . ID=gene-L2557_RS12800;Name=cdd;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=L2557_RS12800 NZ_JAIKUA010000193.1 Protein Homology CDS 10318 11202 . - 0 ID=cds-WP_075672540.1;Parent=gene-L2557_RS12800;Dbxref=GenBank:WP_075672540.1;Name=WP_075672540.1;Ontology_term=GO:0008655,GO:0004126,GO:0008270;gbkey=CDS;gene=cdd;go_function=cytidine deaminase activity|0004126||IEA,zinc ion binding|0008270||IEA;go_process=pyrimidine-containing compound salvage|0008655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247586.1;locus_tag=L2557_RS12800;product=cytidine deaminase;protein_id=WP_075672540.1;transl_table=11 NZ_JAIKUA010000193.1 RefSeq gene 11402 12103 . - . ID=gene-L2557_RS12805;Name=L2557_RS12805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12805 NZ_JAIKUA010000193.1 Protein Homology CDS 11402 12103 . - 0 ID=cds-WP_171455281.1;Parent=gene-L2557_RS12805;Dbxref=GenBank:WP_171455281.1;Name=WP_171455281.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247587.1;locus_tag=L2557_RS12805;product=CidB/LrgB family autolysis modulator;protein_id=WP_171455281.1;transl_table=11 NZ_JAIKUA010000193.1 RefSeq gene 12097 12570 . - . ID=gene-L2557_RS12810;Name=L2557_RS12810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12810 NZ_JAIKUA010000193.1 Protein Homology CDS 12097 12570 . - 0 ID=cds-WP_075672539.1;Parent=gene-L2557_RS12810;Dbxref=GenBank:WP_075672539.1;Name=WP_075672539.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247588.1;locus_tag=L2557_RS12810;product=CidA/LrgA family protein;protein_id=WP_075672539.1;transl_table=11 NZ_JAIKUA010000193.1 RefSeq gene 12705 14732 . - . ID=gene-L2557_RS12815;Name=metG;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=L2557_RS12815 NZ_JAIKUA010000193.1 Protein Homology CDS 12705 14732 . - 0 ID=cds-WP_075672538.1;Parent=gene-L2557_RS12815;Dbxref=GenBank:WP_075672538.1;Name=WP_075672538.1;Ontology_term=GO:0006431,GO:0000166,GO:0004825,GO:0005524;gbkey=CDS;gene=metG;go_function=nucleotide binding|0000166||IEA,methionine-tRNA ligase activity|0004825||IEA,ATP binding|0005524||IEA;go_process=methionyl-tRNA aminoacylation|0006431||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015839562.1;locus_tag=L2557_RS12815;product=methionine--tRNA ligase;protein_id=WP_075672538.1;transl_table=11 NZ_JAIKUA010000193.1 RefSeq gene 14937 16049 . + . ID=gene-L2557_RS12820;Name=apbC;gbkey=Gene;gene=apbC;gene_biotype=protein_coding;locus_tag=L2557_RS12820 NZ_JAIKUA010000193.1 Protein Homology CDS 14937 16049 . + 0 ID=cds-WP_075672537.1;Parent=gene-L2557_RS12820;Dbxref=GenBank:WP_075672537.1;Name=WP_075672537.1;Ontology_term=GO:0016226,GO:0005524,GO:0016887,GO:0051536;gbkey=CDS;gene=apbC;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004388769.1;locus_tag=L2557_RS12820;product=iron-sulfur cluster carrier protein ApbC;protein_id=WP_075672537.1;transl_table=11 NZ_JAIKUA010000193.1 RefSeq gene 16270 16911 . + . ID=gene-L2557_RS12825;Name=udk;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=L2557_RS12825 NZ_JAIKUA010000193.1 Protein Homology CDS 16270 16911 . + 0 ID=cds-WP_075672536.1;Parent=gene-L2557_RS12825;Dbxref=GenBank:WP_075672536.1;Name=WP_075672536.1;Ontology_term=GO:0004849;gbkey=CDS;gene=udk;go_function=uridine kinase activity|0004849||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461067.1;locus_tag=L2557_RS12825;product=uridine kinase;protein_id=WP_075672536.1;transl_table=11 NZ_JAIKUA010000193.1 RefSeq gene 16979 17560 . + . ID=gene-L2557_RS12830;Name=dcd;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=L2557_RS12830 NZ_JAIKUA010000193.1 Protein Homology CDS 16979 17560 . + 0 ID=cds-WP_075672535.1;Parent=gene-L2557_RS12830;Dbxref=GenBank:WP_075672535.1;Name=WP_075672535.1;Ontology_term=GO:0006229,GO:0008829;gbkey=CDS;gene=dcd;go_function=dCTP deaminase activity|0008829||IEA;go_process=dUTP biosynthetic process|0006229||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942378.1;locus_tag=L2557_RS12830;product=dCTP deaminase;protein_id=WP_075672535.1;transl_table=11 NZ_JAIKUA010000193.1 RefSeq gene 17608 19542 . + . ID=gene-L2557_RS12835;Name=asmA;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=L2557_RS12835 NZ_JAIKUA010000193.1 Protein Homology CDS 17608 19542 . + 0 ID=cds-WP_235410109.1;Parent=gene-L2557_RS12835;Dbxref=GenBank:WP_235410109.1;Name=WP_235410109.1;gbkey=CDS;gene=asmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244516.1;locus_tag=L2557_RS12835;product=outer membrane assembly protein AsmA;protein_id=WP_235410109.1;transl_table=11 NZ_JAIKUA010000193.1 RefSeq gene 19818 21179 . + . ID=gene-L2557_RS12840;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=L2557_RS12840 NZ_JAIKUA010000193.1 Protein Homology CDS 19818 21179 . + 0 ID=cds-WP_075672533.1;Parent=gene-L2557_RS12840;Dbxref=GenBank:WP_075672533.1;Name=WP_075672533.1;Ontology_term=GO:0015740,GO:0015556;gbkey=CDS;gene=dcuC;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247593.1;locus_tag=L2557_RS12840;product=anaerobic C4-dicarboxylate transporter DcuC;protein_id=WP_075672533.1;transl_table=11 NZ_JAIKUA010000193.1 RefSeq gene 21292 21591 . - . ID=gene-L2557_RS12845;Name=L2557_RS12845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12845 NZ_JAIKUA010000193.1 GeneMarkS-2+ CDS 21292 21591 . - 0 ID=cds-WP_099659790.1;Parent=gene-L2557_RS12845;Dbxref=GenBank:WP_099659790.1;Name=WP_099659790.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS12845;product=hypothetical protein;protein_id=WP_099659790.1;transl_table=11 NZ_JAIKUA010000193.1 RefSeq gene 21668 23248 . - . ID=gene-L2557_RS12850;Name=L2557_RS12850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12850 NZ_JAIKUA010000193.1 Protein Homology CDS 21668 23248 . - 0 ID=cds-WP_075672531.1;Parent=gene-L2557_RS12850;Dbxref=GenBank:WP_075672531.1;Name=WP_075672531.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537526.1;locus_tag=L2557_RS12850;product=TerC family protein;protein_id=WP_075672531.1;transl_table=11 NZ_JAIKUA010000193.1 RefSeq gene 23493 24899 . + . ID=gene-L2557_RS12855;Name=gndA;gbkey=Gene;gene=gndA;gene_biotype=protein_coding;locus_tag=L2557_RS12855 NZ_JAIKUA010000193.1 Protein Homology CDS 23493 24899 . + 0 ID=cds-WP_023581264.1;Parent=gene-L2557_RS12855;Dbxref=GenBank:WP_023581264.1;Name=WP_023581264.1;Ontology_term=GO:0006098,GO:0004616,GO:0050661;gbkey=CDS;gene=gndA;go_function=phosphogluconate dehydrogenase (decarboxylating) activity|0004616||IEA,NADP binding|0050661||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010846854.1;locus_tag=L2557_RS12855;product=NADP-dependent phosphogluconate dehydrogenase;protein_id=WP_023581264.1;transl_table=11 NZ_JAIKUA010000193.1 RefSeq gene 25116 25484 . - . ID=gene-L2557_RS12860;Name=L2557_RS12860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12860 NZ_JAIKUA010000193.1 Protein Homology CDS 25116 25484 . - 0 ID=cds-WP_075672530.1;Parent=gene-L2557_RS12860;Dbxref=GenBank:WP_075672530.1;Name=WP_075672530.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660965.1;locus_tag=L2557_RS12860;product=winged helix-turn-helix transcriptional regulator;protein_id=WP_075672530.1;transl_table=11 NZ_JAIKUA010000193.1 RefSeq gene 25584 26237 . + . ID=gene-L2557_RS12865;Name=nfsB;gbkey=Gene;gene=nfsB;gene_biotype=protein_coding;locus_tag=L2557_RS12865 NZ_JAIKUA010000193.1 Protein Homology CDS 25584 26237 . + 0 ID=cds-WP_075672529.1;Parent=gene-L2557_RS12865;Dbxref=GenBank:WP_075672529.1;Name=WP_075672529.1;Ontology_term=GO:0016491;gbkey=CDS;gene=nfsB;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662321.1;locus_tag=L2557_RS12865;product=oxygen-insensitive NAD(P)H nitroreductase;protein_id=WP_075672529.1;transl_table=11 ##sequence-region NZ_JAIKUA010000194.1 1 3107 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000194.1 RefSeq region 1 3107 . + . ID=NZ_JAIKUA010000194.1:1..3107;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000194.1 RefSeq gene 93 620 . + . ID=gene-L2557_RS12870;Name=L2557_RS12870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12870 NZ_JAIKUA010000194.1 Protein Homology CDS 93 620 . + 0 ID=cds-WP_075674087.1;Parent=gene-L2557_RS12870;Dbxref=GenBank:WP_075674087.1;Name=WP_075674087.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534899.1;locus_tag=L2557_RS12870;product=fimbrial protein;protein_id=WP_075674087.1;transl_table=11 NZ_JAIKUA010000194.1 RefSeq gene 709 1269 . + . ID=gene-L2557_RS12875;Name=L2557_RS12875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12875 NZ_JAIKUA010000194.1 Protein Homology CDS 709 1269 . + 0 ID=cds-WP_099659918.1;Parent=gene-L2557_RS12875;Dbxref=GenBank:WP_099659918.1;Name=WP_099659918.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247326.1;locus_tag=L2557_RS12875;product=fimbrial protein;protein_id=WP_099659918.1;transl_table=11 NZ_JAIKUA010000194.1 RefSeq gene 1290 3107 . + . ID=gene-L2557_RS12880;Name=L2557_RS12880;end_range=3107,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12880;partial=true NZ_JAIKUA010000194.1 Protein Homology CDS 1290 3107 . + 0 ID=cds-WP_235410110.1;Parent=gene-L2557_RS12880;Dbxref=GenBank:WP_235410110.1;Name=WP_235410110.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;end_range=3107,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247320.1;locus_tag=L2557_RS12880;partial=true;product=fimbria/pilus outer membrane usher protein;protein_id=WP_235410110.1;transl_table=11 ##sequence-region NZ_JAIKUA010000195.1 1 2704 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000195.1 RefSeq region 1 2704 . + . ID=NZ_JAIKUA010000195.1:1..2704;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000195.1 RefSeq gene 46 1299 . + . ID=gene-L2557_RS12885;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=L2557_RS12885 NZ_JAIKUA010000195.1 Protein Homology CDS 46 1299 . + 0 ID=cds-WP_075671933.1;Parent=gene-L2557_RS12885;Dbxref=GenBank:WP_075671933.1;Name=WP_075671933.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245053.1;locus_tag=L2557_RS12885;product=peptidase T;protein_id=WP_075671933.1;transl_table=11 NZ_JAIKUA010000195.1 RefSeq gene 1296 2663 . + . ID=gene-L2557_RS12890;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=L2557_RS12890 NZ_JAIKUA010000195.1 Protein Homology CDS 1296 2663 . + 0 ID=cds-WP_099659958.1;Parent=gene-L2557_RS12890;Dbxref=GenBank:WP_099659958.1;Name=WP_099659958.1;Ontology_term=GO:0015740,GO:0015556,GO:0016020;gbkey=CDS;gene=dcuC;go_component=membrane|0016020||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252539.1;locus_tag=L2557_RS12890;product=C4-dicarboxylate transporter DcuC;protein_id=WP_099659958.1;transl_table=11 ##sequence-region NZ_JAIKUA010000196.1 1 7519 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000196.1 RefSeq region 1 7519 . + . ID=NZ_JAIKUA010000196.1:1..7519;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000196.1 cmsearch riboswitch 54 166 . + . ID=id-NZ_JAIKUA010000196.1:54..166;Dbxref=RFAM:RF00080;Note=yybP-ykoY riboswitch is a manganese riboswitch that directly binds Mn;bound_moiety=manganese;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAIKUA010000196.1 RefSeq gene 251 838 . + . ID=gene-L2557_RS12895;Name=mntP;gbkey=Gene;gene=mntP;gene_biotype=protein_coding;locus_tag=L2557_RS12895 NZ_JAIKUA010000196.1 Protein Homology CDS 251 838 . + 0 ID=cds-WP_006533102.1;Parent=gene-L2557_RS12895;Dbxref=GenBank:WP_006533102.1;Name=WP_006533102.1;gbkey=CDS;gene=mntP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011146923.1;locus_tag=L2557_RS12895;product=manganese efflux pump MntP;protein_id=WP_006533102.1;transl_table=11 NZ_JAIKUA010000196.1 RefSeq gene 921 1736 . - . ID=gene-L2557_RS12900;Name=rlmA;gbkey=Gene;gene=rlmA;gene_biotype=protein_coding;locus_tag=L2557_RS12900 NZ_JAIKUA010000196.1 Protein Homology CDS 921 1736 . - 0 ID=cds-WP_099660602.1;Parent=gene-L2557_RS12900;Dbxref=GenBank:WP_099660602.1;Name=WP_099660602.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmA;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017893116.1;locus_tag=L2557_RS12900;product=23S rRNA (guanine(745)-N(1))-methyltransferase;protein_id=WP_099660602.1;transl_table=11 NZ_JAIKUA010000196.1 RefSeq gene 1884 2297 . - . ID=gene-L2557_RS12905;Name=psiE;gbkey=Gene;gene=psiE;gene_biotype=protein_coding;locus_tag=L2557_RS12905 NZ_JAIKUA010000196.1 Protein Homology CDS 1884 2297 . - 0 ID=cds-WP_023581865.1;Parent=gene-L2557_RS12905;Dbxref=GenBank:WP_023581865.1;Name=WP_023581865.1;gbkey=CDS;gene=psiE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248313.1;locus_tag=L2557_RS12905;product=phosphate-starvation-inducible protein PsiE;protein_id=WP_023581865.1;transl_table=11 NZ_JAIKUA010000196.1 RefSeq gene 2533 2979 . + . ID=gene-L2557_RS12910;Name=L2557_RS12910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12910 NZ_JAIKUA010000196.1 Protein Homology CDS 2533 2979 . + 0 ID=cds-WP_075674135.1;Parent=gene-L2557_RS12910;Dbxref=GenBank:WP_075674135.1;Name=WP_075674135.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533105.1;locus_tag=L2557_RS12910;product=universal stress protein;protein_id=WP_075674135.1;transl_table=11 NZ_JAIKUA010000196.1 RefSeq gene 3235 3819 . + . ID=gene-L2557_RS12915;Name=L2557_RS12915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12915 NZ_JAIKUA010000196.1 Protein Homology CDS 3235 3819 . + 0 ID=cds-WP_075674136.1;Parent=gene-L2557_RS12915;Dbxref=GenBank:WP_075674136.1;Name=WP_075674136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533106.1;locus_tag=L2557_RS12915;product=GrpB family protein;protein_id=WP_075674136.1;transl_table=11 NZ_JAIKUA010000196.1 RefSeq gene 3893 4711 . - . ID=gene-L2557_RS12920;Name=L2557_RS12920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12920 NZ_JAIKUA010000196.1 Protein Homology CDS 3893 4711 . - 0 ID=cds-WP_109418892.1;Parent=gene-L2557_RS12920;Dbxref=GenBank:WP_109418892.1;Name=WP_109418892.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248315.1;locus_tag=L2557_RS12920;product=MBL fold metallo-hydrolase;protein_id=WP_109418892.1;transl_table=11 NZ_JAIKUA010000196.1 RefSeq gene 4920 5357 . - . ID=gene-L2557_RS12925;Name=L2557_RS12925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12925 NZ_JAIKUA010000196.1 Protein Homology CDS 4920 5357 . - 0 ID=cds-WP_075674138.1;Parent=gene-L2557_RS12925;Dbxref=GenBank:WP_075674138.1;Name=WP_075674138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243479.1;locus_tag=L2557_RS12925;product=universal stress protein;protein_id=WP_075674138.1;transl_table=11 NZ_JAIKUA010000196.1 RefSeq gene 5651 7063 . - . ID=gene-L2557_RS12930;Name=cycA;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;gene_synonym=dagA;locus_tag=L2557_RS12930 NZ_JAIKUA010000196.1 Protein Homology CDS 5651 7063 . - 0 ID=cds-WP_075674139.1;Parent=gene-L2557_RS12930;Dbxref=GenBank:WP_075674139.1;Name=WP_075674139.1;Ontology_term=GO:0006865,GO:0055085,GO:0016020;gbkey=CDS;gene=cycA;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243480.1;locus_tag=L2557_RS12930;product=D-serine/D-alanine/glycine transporter;protein_id=WP_075674139.1;transl_table=11 NZ_JAIKUA010000196.1 RefSeq gene 7324 7399 . + . ID=gene-L2557_RS12935;Name=L2557_RS12935;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS12935 NZ_JAIKUA010000196.1 tRNAscan-SE tRNA 7324 7399 . + . ID=rna-L2557_RS12935;Parent=gene-L2557_RS12935;anticodon=(pos:7357..7359);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS12935;product=tRNA-Lys NZ_JAIKUA010000196.1 tRNAscan-SE exon 7324 7399 . + . ID=exon-L2557_RS12935-1;Parent=rna-L2557_RS12935;anticodon=(pos:7357..7359);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS12935;product=tRNA-Lys ##sequence-region NZ_JAIKUA010000197.1 1 22879 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000197.1 RefSeq region 1 22879 . + . ID=NZ_JAIKUA010000197.1:1..22879;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000197.1 RefSeq gene 1 655 . + . ID=gene-L2557_RS12940;Name=L2557_RS12940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12940;partial=true;start_range=.,1 NZ_JAIKUA010000197.1 GeneMarkS-2+ CDS 1 655 . + 1 ID=cds-WP_235410111.1;Parent=gene-L2557_RS12940;Dbxref=GenBank:WP_235410111.1;Name=WP_235410111.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS12940;partial=true;product=hypothetical protein;protein_id=WP_235410111.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000197.1 RefSeq gene 703 2988 . - . ID=gene-L2557_RS12945;Name=L2557_RS12945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12945 NZ_JAIKUA010000197.1 GeneMarkS-2+ CDS 703 2988 . - 0 ID=cds-WP_235410112.1;Parent=gene-L2557_RS12945;Dbxref=GenBank:WP_235410112.1;Name=WP_235410112.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS12945;product=hypothetical protein;protein_id=WP_235410112.1;transl_table=11 NZ_JAIKUA010000197.1 RefSeq gene 3162 3359 . + . ID=gene-L2557_RS12950;Name=L2557_RS12950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12950 NZ_JAIKUA010000197.1 GeneMarkS-2+ CDS 3162 3359 . + 0 ID=cds-WP_235410113.1;Parent=gene-L2557_RS12950;Dbxref=GenBank:WP_235410113.1;Name=WP_235410113.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS12950;product=hypothetical protein;protein_id=WP_235410113.1;transl_table=11 NZ_JAIKUA010000197.1 RefSeq gene 3761 4498 . + . ID=gene-L2557_RS12955;Name=L2557_RS12955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12955 NZ_JAIKUA010000197.1 Protein Homology CDS 3761 4498 . + 0 ID=cds-WP_235410114.1;Parent=gene-L2557_RS12955;Dbxref=GenBank:WP_235410114.1;Name=WP_235410114.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000235317.1;locus_tag=L2557_RS12955;product=ORF6N domain-containing protein;protein_id=WP_235410114.1;transl_table=11 NZ_JAIKUA010000197.1 RefSeq gene 4544 4930 . - . ID=gene-L2557_RS12960;Name=L2557_RS12960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12960 NZ_JAIKUA010000197.1 Protein Homology CDS 4544 4930 . - 0 ID=cds-WP_235410115.1;Parent=gene-L2557_RS12960;Dbxref=GenBank:WP_235410115.1;Name=WP_235410115.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF019749.6;locus_tag=L2557_RS12960;product=membrane lipoprotein lipid attachment site-containing protein;protein_id=WP_235410115.1;transl_table=11 NZ_JAIKUA010000197.1 RefSeq gene 5065 5556 . + . ID=gene-L2557_RS12965;Name=L2557_RS12965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12965 NZ_JAIKUA010000197.1 GeneMarkS-2+ CDS 5065 5556 . + 0 ID=cds-WP_161748025.1;Parent=gene-L2557_RS12965;Dbxref=GenBank:WP_161748025.1;Name=WP_161748025.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS12965;product=hypothetical protein;protein_id=WP_161748025.1;transl_table=11 NZ_JAIKUA010000197.1 RefSeq gene 5587 8535 . - . ID=gene-L2557_RS12970;Name=L2557_RS12970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12970 NZ_JAIKUA010000197.1 Protein Homology CDS 5587 8535 . - 0 ID=cds-WP_235410116.1;Parent=gene-L2557_RS12970;Dbxref=GenBank:WP_235410116.1;Name=WP_235410116.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001145707.1;locus_tag=L2557_RS12970;product=hypothetical protein;protein_id=WP_235410116.1;transl_table=11 NZ_JAIKUA010000197.1 RefSeq gene 8535 11390 . - . ID=gene-L2557_RS12975;Name=L2557_RS12975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12975 NZ_JAIKUA010000197.1 Protein Homology CDS 8535 11390 . - 0 ID=cds-WP_235410117.1;Parent=gene-L2557_RS12975;Dbxref=GenBank:WP_235410117.1;Name=WP_235410117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243336.1;locus_tag=L2557_RS12975;product=hypothetical protein;protein_id=WP_235410117.1;transl_table=11 NZ_JAIKUA010000197.1 RefSeq gene 11393 11941 . - . ID=gene-L2557_RS12980;Name=L2557_RS12980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12980 NZ_JAIKUA010000197.1 Protein Homology CDS 11393 11941 . - 0 ID=cds-WP_004243338.1;Parent=gene-L2557_RS12980;Dbxref=GenBank:WP_004243338.1;Name=WP_004243338.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243338.1;locus_tag=L2557_RS12980;product=hypothetical protein;protein_id=WP_004243338.1;transl_table=11 NZ_JAIKUA010000197.1 RefSeq gene 11941 12411 . - . ID=gene-L2557_RS12985;Name=L2557_RS12985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12985 NZ_JAIKUA010000197.1 Protein Homology CDS 11941 12411 . - 0 ID=cds-WP_235410118.1;Parent=gene-L2557_RS12985;Dbxref=GenBank:WP_235410118.1;Name=WP_235410118.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250881.1;locus_tag=L2557_RS12985;product=hypothetical protein;protein_id=WP_235410118.1;transl_table=11 NZ_JAIKUA010000197.1 RefSeq gene 12413 14875 . - . ID=gene-L2557_RS12990;Name=L2557_RS12990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12990 NZ_JAIKUA010000197.1 Protein Homology CDS 12413 14875 . - 0 ID=cds-WP_235410119.1;Parent=gene-L2557_RS12990;Dbxref=GenBank:WP_235410119.1;Name=WP_235410119.1;Ontology_term=GO:0098015;gbkey=CDS;go_component=virus tail|0098015||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001018555.1;locus_tag=L2557_RS12990;product=phage tail protein;protein_id=WP_235410119.1;transl_table=11 NZ_JAIKUA010000197.1 RefSeq gene 14875 15480 . - . ID=gene-L2557_RS12995;Name=L2557_RS12995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS12995 NZ_JAIKUA010000197.1 Protein Homology CDS 14875 15480 . - 0 ID=cds-WP_235410120.1;Parent=gene-L2557_RS12995;Dbxref=GenBank:WP_235410120.1;Name=WP_235410120.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001544819.1;locus_tag=L2557_RS12995;product=phage connector family protein;protein_id=WP_235410120.1;transl_table=11 NZ_JAIKUA010000197.1 RefSeq gene 15534 15875 . - . ID=gene-L2557_RS13000;Name=L2557_RS13000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13000 NZ_JAIKUA010000197.1 Protein Homology CDS 15534 15875 . - 0 ID=cds-WP_004250878.1;Parent=gene-L2557_RS13000;Dbxref=GenBank:WP_004250878.1;Name=WP_004250878.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250878.1;locus_tag=L2557_RS13000;product=hypothetical protein;protein_id=WP_004250878.1;transl_table=11 NZ_JAIKUA010000197.1 RefSeq gene 15884 16315 . - . ID=gene-L2557_RS13005;Name=L2557_RS13005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13005 NZ_JAIKUA010000197.1 Protein Homology CDS 15884 16315 . - 0 ID=cds-WP_004250877.1;Parent=gene-L2557_RS13005;Dbxref=GenBank:WP_004250877.1;Name=WP_004250877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250877.1;locus_tag=L2557_RS13005;product=Bbp16 family capsid cement protein;protein_id=WP_004250877.1;transl_table=11 NZ_JAIKUA010000197.1 RefSeq gene 16374 17354 . - . ID=gene-L2557_RS13010;Name=L2557_RS13010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13010 NZ_JAIKUA010000197.1 Protein Homology CDS 16374 17354 . - 0 ID=cds-WP_004243350.1;Parent=gene-L2557_RS13010;Dbxref=GenBank:WP_004243350.1;Name=WP_004243350.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243350.1;locus_tag=L2557_RS13010;product=major capsid protein;protein_id=WP_004243350.1;transl_table=11 NZ_JAIKUA010000197.1 RefSeq gene 17370 18047 . - . ID=gene-L2557_RS13015;Name=L2557_RS13015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13015 NZ_JAIKUA010000197.1 Protein Homology CDS 17370 18047 . - 0 ID=cds-WP_087726489.1;Parent=gene-L2557_RS13015;Dbxref=GenBank:WP_087726489.1;Name=WP_087726489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250876.1;locus_tag=L2557_RS13015;product=peptidase;protein_id=WP_087726489.1;transl_table=11 NZ_JAIKUA010000197.1 RefSeq gene 18065 18379 . - . ID=gene-L2557_RS13020;Name=L2557_RS13020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13020 NZ_JAIKUA010000197.1 Protein Homology CDS 18065 18379 . - 0 ID=cds-WP_004243354.1;Parent=gene-L2557_RS13020;Dbxref=GenBank:WP_004243354.1;Name=WP_004243354.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243354.1;locus_tag=L2557_RS13020;product=Bbp19 family protein;protein_id=WP_004243354.1;transl_table=11 NZ_JAIKUA010000197.1 RefSeq gene 18376 20040 . - . ID=gene-L2557_RS13025;Name=L2557_RS13025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13025 NZ_JAIKUA010000197.1 Protein Homology CDS 18376 20040 . - 0 ID=cds-WP_175216673.1;Parent=gene-L2557_RS13025;Dbxref=GenBank:WP_175216673.1;Name=WP_175216673.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250875.1;locus_tag=L2557_RS13025;product=portal protein;protein_id=WP_175216673.1;transl_table=11 NZ_JAIKUA010000197.1 RefSeq gene 20050 20262 . - . ID=gene-L2557_RS13030;Name=L2557_RS13030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13030 NZ_JAIKUA010000197.1 Protein Homology CDS 20050 20262 . - 0 ID=cds-WP_004243356.1;Parent=gene-L2557_RS13030;Dbxref=GenBank:WP_004243356.1;Name=WP_004243356.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243356.1;locus_tag=L2557_RS13030;product=hypothetical protein;protein_id=WP_004243356.1;transl_table=11 NZ_JAIKUA010000197.1 RefSeq gene 20447 21931 . - . ID=gene-L2557_RS13035;Name=L2557_RS13035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13035 NZ_JAIKUA010000197.1 Protein Homology CDS 20447 21931 . - 0 ID=cds-WP_175216672.1;Parent=gene-L2557_RS13035;Dbxref=GenBank:WP_175216672.1;Name=WP_175216672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243357.1;locus_tag=L2557_RS13035;product=terminase;protein_id=WP_175216672.1;transl_table=11 NZ_JAIKUA010000197.1 RefSeq gene 21931 22494 . - . ID=gene-L2557_RS13040;Name=L2557_RS13040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13040 NZ_JAIKUA010000197.1 Protein Homology CDS 21931 22494 . - 0 ID=cds-WP_223231918.1;Parent=gene-L2557_RS13040;Dbxref=GenBank:WP_223231918.1;Name=WP_223231918.1;Ontology_term=GO:0051276,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=chromosome organization|0051276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250874.1;locus_tag=L2557_RS13040;product=terminase small subunit;protein_id=WP_223231918.1;transl_table=11 NZ_JAIKUA010000197.1 RefSeq gene 22546 22879 . - . ID=gene-L2557_RS13045;Name=L2557_RS13045;end_range=22879,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13045;partial=true NZ_JAIKUA010000197.1 GeneMarkS-2+ CDS 22546 22879 . - 1 ID=cds-WP_235410121.1;Parent=gene-L2557_RS13045;Dbxref=GenBank:WP_235410121.1;Name=WP_235410121.1;end_range=22879,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS13045;partial=true;product=hypothetical protein;protein_id=WP_235410121.1;transl_table=11 ##sequence-region NZ_JAIKUA010000198.1 1 15970 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000198.1 RefSeq region 1 15970 . + . ID=NZ_JAIKUA010000198.1:1..15970;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000198.1 RefSeq gene 1 865 . + . ID=gene-L2557_RS13050;Name=L2557_RS13050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13050;partial=true;start_range=.,1 NZ_JAIKUA010000198.1 Protein Homology CDS 1 865 . + 1 ID=cds-WP_235410122.1;Parent=gene-L2557_RS13050;Dbxref=GenBank:WP_235410122.1;Name=WP_235410122.1;Ontology_term=GO:0006310,GO:0032196,GO:0003677,GO:0004519,GO:0046872;gbkey=CDS;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA,metal ion binding|0046872||IEA;go_process=DNA recombination|0006310||IEA,transposition|0032196||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368856.1;locus_tag=L2557_RS13050;partial=true;product=RNA-guided endonuclease InsQ/TnpB family protein;protein_id=WP_235410122.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000198.1 RefSeq gene 948 1442 . - . ID=gene-L2557_RS13055;Name=folK;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=L2557_RS13055 NZ_JAIKUA010000198.1 Protein Homology CDS 948 1442 . - 0 ID=cds-WP_109419527.1;Parent=gene-L2557_RS13055;Dbxref=GenBank:WP_109419527.1;Name=WP_109419527.1;Ontology_term=GO:0009396,GO:0003848;gbkey=CDS;gene=folK;go_function=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity|0003848||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245001.1;locus_tag=L2557_RS13055;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase;protein_id=WP_109419527.1;transl_table=11 NZ_JAIKUA010000198.1 RefSeq gene 1435 3042 . - . ID=gene-L2557_RS13060;Name=pcnB;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=L2557_RS13060 NZ_JAIKUA010000198.1 Protein Homology CDS 1435 3042 . - 0 ID=cds-WP_075673462.1;Parent=gene-L2557_RS13060;Dbxref=GenBank:WP_075673462.1;Name=WP_075673462.1;Ontology_term=GO:0003723,GO:1990817;gbkey=CDS;gene=pcnB;go_function=RNA binding|0003723||IEA,poly(A) RNA polymerase activity|1990817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010723084.1;locus_tag=L2557_RS13060;product=polynucleotide adenylyltransferase PcnB;protein_id=WP_075673462.1;transl_table=11 NZ_JAIKUA010000198.1 RefSeq gene 3080 3991 . - . ID=gene-L2557_RS13065;Name=gluQRS;gbkey=Gene;gene=gluQRS;gene_biotype=protein_coding;locus_tag=L2557_RS13065 NZ_JAIKUA010000198.1 Protein Homology CDS 3080 3991 . - 0 ID=cds-WP_223673831.1;Parent=gene-L2557_RS13065;Dbxref=GenBank:WP_223673831.1;Name=WP_223673831.1;Ontology_term=GO:0043039,GO:0004812;gbkey=CDS;gene=gluQRS;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation|0043039||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534954.1;locus_tag=L2557_RS13065;product=tRNA glutamyl-Q(34) synthetase GluQRS;protein_id=WP_223673831.1;transl_table=11 NZ_JAIKUA010000198.1 RefSeq gene 4045 4500 . - . ID=gene-L2557_RS13070;Name=dksA;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=L2557_RS13070 NZ_JAIKUA010000198.1 Protein Homology CDS 4045 4500 . - 0 ID=cds-WP_023580786.1;Parent=gene-L2557_RS13070;Dbxref=GenBank:WP_023580786.1;Name=WP_023580786.1;gbkey=CDS;gene=dksA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209354.1;locus_tag=L2557_RS13070;product=RNA polymerase-binding protein DksA;protein_id=WP_023580786.1;transl_table=11 NZ_JAIKUA010000198.1 RefSeq gene 4697 5407 . - . ID=gene-L2557_RS13075;Name=sfsA;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=L2557_RS13075 NZ_JAIKUA010000198.1 Protein Homology CDS 4697 5407 . - 0 ID=cds-WP_109419528.1;Parent=gene-L2557_RS13075;Dbxref=GenBank:WP_109419528.1;Name=WP_109419528.1;Ontology_term=GO:0003677;gbkey=CDS;gene=sfsA;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244997.1;locus_tag=L2557_RS13075;product=DNA/RNA nuclease SfsA;protein_id=WP_109419528.1;transl_table=11 NZ_JAIKUA010000198.1 RefSeq gene 5493 7925 . + . ID=gene-L2557_RS13080;Name=hrpB;gbkey=Gene;gene=hrpB;gene_biotype=protein_coding;locus_tag=L2557_RS13080 NZ_JAIKUA010000198.1 Protein Homology CDS 5493 7925 . + 0 ID=cds-WP_223673845.1;Parent=gene-L2557_RS13080;Dbxref=GenBank:WP_223673845.1;Name=WP_223673845.1;Ontology_term=GO:0004386,GO:0005524;gbkey=CDS;gene=hrpB;go_function=helicase activity|0004386||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005181554.1;locus_tag=L2557_RS13080;product=ATP-dependent helicase HrpB;protein_id=WP_223673845.1;transl_table=11 NZ_JAIKUA010000198.1 RefSeq gene 8054 10360 . + . ID=gene-L2557_RS13085;Name=mrcB;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;locus_tag=L2557_RS13085 NZ_JAIKUA010000198.1 Protein Homology CDS 8054 10360 . + 0 ID=cds-WP_075673458.1;Parent=gene-L2557_RS13085;Dbxref=GenBank:WP_075673458.1;Name=WP_075673458.1;Ontology_term=GO:0009252,GO:0046677,GO:0008658,GO:0008955,GO:0009274;gbkey=CDS;gene=mrcB;go_component=peptidoglycan-based cell wall|0009274||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009111805.1;locus_tag=L2557_RS13085;product=bifunctional glycosyl transferase/transpeptidase;protein_id=WP_075673458.1;transl_table=11 NZ_JAIKUA010000198.1 RefSeq gene 10452 11738 . - . ID=gene-L2557_RS13090;Name=hemL;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=L2557_RS13090 NZ_JAIKUA010000198.1 Protein Homology CDS 10452 11738 . - 0 ID=cds-WP_235410123.1;Parent=gene-L2557_RS13090;Dbxref=GenBank:WP_235410123.1;Name=WP_235410123.1;Ontology_term=GO:0033014,GO:0042286;gbkey=CDS;gene=hemL;go_function=glutamate-1-semialdehyde 2%2C1-aminomutase activity|0042286||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367503.1;locus_tag=L2557_RS13090;product=glutamate-1-semialdehyde 2%2C1-aminomutase;protein_id=WP_235410123.1;transl_table=11 NZ_JAIKUA010000198.1 RefSeq gene 12014 12358 . + . ID=gene-L2557_RS13095;Name=erpA;gbkey=Gene;gene=erpA;gene_biotype=protein_coding;locus_tag=L2557_RS13095 NZ_JAIKUA010000198.1 Protein Homology CDS 12014 12358 . + 0 ID=cds-WP_006534944.1;Parent=gene-L2557_RS13095;Dbxref=GenBank:WP_006534944.1;Name=WP_006534944.1;Ontology_term=GO:0016226,GO:0051536;gbkey=CDS;gene=erpA;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295564.1;locus_tag=L2557_RS13095;product=iron-sulfur cluster insertion protein ErpA;protein_id=WP_006534944.1;transl_table=11 NZ_JAIKUA010000198.1 RefSeq gene 12580 13407 . - . ID=gene-L2557_RS13100;Name=btuF;gbkey=Gene;gene=btuF;gene_biotype=protein_coding;locus_tag=L2557_RS13100 NZ_JAIKUA010000198.1 Protein Homology CDS 12580 13407 . - 0 ID=cds-WP_075673456.1;Parent=gene-L2557_RS13100;Dbxref=GenBank:WP_075673456.1;Name=WP_075673456.1;Ontology_term=GO:0005524,GO:0031419;gbkey=CDS;gene=btuF;go_function=ATP binding|0005524||IEA,cobalamin binding|0031419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252487.1;locus_tag=L2557_RS13100;product=vitamin B12 ABC transporter substrate-binding protein BtuF;protein_id=WP_075673456.1;transl_table=11 NZ_JAIKUA010000198.1 RefSeq gene 13513 14208 . - . ID=gene-L2557_RS13105;Name=mtnN;gbkey=Gene;gene=mtnN;gene_biotype=protein_coding;locus_tag=L2557_RS13105 NZ_JAIKUA010000198.1 Protein Homology CDS 13513 14208 . - 0 ID=cds-WP_075673455.1;Parent=gene-L2557_RS13105;Dbxref=GenBank:WP_075673455.1;Name=WP_075673455.1;Ontology_term=GO:0009164,GO:0019509,GO:0008782,GO:0008930;gbkey=CDS;gene=mtnN;go_function=adenosylhomocysteine nucleosidase activity|0008782||IEA,methylthioadenosine nucleosidase activity|0008930||IEA;go_process=nucleoside catabolic process|0009164||IEA,L-methionine salvage from methylthioadenosine|0019509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012777014.1;locus_tag=L2557_RS13105;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=WP_075673455.1;transl_table=11 NZ_JAIKUA010000198.1 RefSeq gene 14336 15844 . + . ID=gene-L2557_RS13110;Name=dgt;gbkey=Gene;gene=dgt;gene_biotype=protein_coding;locus_tag=L2557_RS13110 NZ_JAIKUA010000198.1 Protein Homology CDS 14336 15844 . + 0 ID=cds-WP_099659930.1;Parent=gene-L2557_RS13110;Dbxref=GenBank:WP_099659930.1;Name=WP_099659930.1;Ontology_term=GO:0006203,GO:0000287,GO:0008832;gbkey=CDS;gene=dgt;go_function=magnesium ion binding|0000287||IEA,dGTPase activity|0008832||IEA;go_process=dGTP catabolic process|0006203||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367509.1;locus_tag=L2557_RS13110;product=dGTPase;protein_id=WP_099659930.1;transl_table=11 ##sequence-region NZ_JAIKUA010000199.1 1 12213 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000199.1 RefSeq region 1 12213 . + . ID=NZ_JAIKUA010000199.1:1..12213;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000199.1 RefSeq gene 418 1338 . - . ID=gene-L2557_RS13115;Name=L2557_RS13115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13115 NZ_JAIKUA010000199.1 Protein Homology CDS 418 1338 . - 0 ID=cds-WP_223673554.1;Parent=gene-L2557_RS13115;Dbxref=GenBank:WP_223673554.1;Name=WP_223673554.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248401.1;locus_tag=L2557_RS13115;product=DMT family transporter;protein_id=WP_223673554.1;transl_table=11 NZ_JAIKUA010000199.1 RefSeq gene 1460 2242 . + . ID=gene-L2557_RS13120;Name=L2557_RS13120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13120 NZ_JAIKUA010000199.1 Protein Homology CDS 1460 2242 . + 0 ID=cds-WP_075670590.1;Parent=gene-L2557_RS13120;Dbxref=GenBank:WP_075670590.1;Name=WP_075670590.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248400.1;locus_tag=L2557_RS13120;product=AraC family transcriptional regulator;protein_id=WP_075670590.1;transl_table=11 NZ_JAIKUA010000199.1 RefSeq gene 2392 3519 . + . ID=gene-L2557_RS13125;Name=pdxB;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=L2557_RS13125 NZ_JAIKUA010000199.1 Protein Homology CDS 2392 3519 . + 0 ID=cds-WP_099659397.1;Parent=gene-L2557_RS13125;Dbxref=GenBank:WP_099659397.1;Name=WP_099659397.1;Ontology_term=GO:0008615,GO:0033711,GO:0046983,GO:0051287;gbkey=CDS;gene=pdxB;go_function=4-phosphoerythronate dehydrogenase activity|0033711||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017627981.1;locus_tag=L2557_RS13125;product=4-phosphoerythronate dehydrogenase PdxB;protein_id=WP_099659397.1;transl_table=11 NZ_JAIKUA010000199.1 RefSeq gene 3565 4575 . + . ID=gene-L2557_RS13130;Name=L2557_RS13130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13130 NZ_JAIKUA010000199.1 Protein Homology CDS 3565 4575 . + 0 ID=cds-WP_075670594.1;Parent=gene-L2557_RS13130;Dbxref=GenBank:WP_075670594.1;Name=WP_075670594.1;Ontology_term=GO:0008652,GO:0016620,GO:0046983,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,protein dimerization activity|0046983||IEA,NAD binding|0051287||IEA;go_process=amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243737.1;locus_tag=L2557_RS13130;product=aspartate-semialdehyde dehydrogenase;protein_id=WP_075670594.1;transl_table=11 NZ_JAIKUA010000199.1 RefSeq gene 4575 5459 . + . ID=gene-L2557_RS13135;Name=truA;gbkey=Gene;gene=truA;gene_biotype=protein_coding;locus_tag=L2557_RS13135 NZ_JAIKUA010000199.1 Protein Homology CDS 4575 5459 . + 0 ID=cds-WP_075670596.1;Parent=gene-L2557_RS13135;Dbxref=GenBank:WP_075670596.1;Name=WP_075670596.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=truA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533347.1;locus_tag=L2557_RS13135;product=tRNA pseudouridine(38-40) synthase TruA;protein_id=WP_075670596.1;transl_table=11 NZ_JAIKUA010000199.1 RefSeq gene 5484 6185 . + . ID=gene-L2557_RS13140;Name=L2557_RS13140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13140 NZ_JAIKUA010000199.1 Protein Homology CDS 5484 6185 . + 0 ID=cds-WP_099659398.1;Parent=gene-L2557_RS13140;Dbxref=GenBank:WP_099659398.1;Name=WP_099659398.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243735.1;locus_tag=L2557_RS13140;product=DedA family protein;protein_id=WP_099659398.1;transl_table=11 NZ_JAIKUA010000199.1 RefSeq gene 6355 7323 . + . ID=gene-L2557_RS13145;Name=accD;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=L2557_RS13145 NZ_JAIKUA010000199.1 Protein Homology CDS 6355 7323 . + 0 ID=cds-WP_099659399.1;Parent=gene-L2557_RS13145;Dbxref=GenBank:WP_099659399.1;Name=WP_099659399.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accD;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243734.1;locus_tag=L2557_RS13145;product=acetyl-CoA carboxylase%2C carboxyltransferase subunit beta;protein_id=WP_099659399.1;transl_table=11 NZ_JAIKUA010000199.1 RefSeq gene 7316 8614 . + . ID=gene-L2557_RS13150;Name=folC;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=L2557_RS13150 NZ_JAIKUA010000199.1 Protein Homology CDS 7316 8614 . + 0 ID=cds-WP_099659400.1;Parent=gene-L2557_RS13150;Dbxref=GenBank:WP_099659400.1;Name=WP_099659400.1;Ontology_term=GO:0009396,GO:0004326,GO:0005524,GO:0016874;gbkey=CDS;gene=folC;go_function=tetrahydrofolylpolyglutamate synthase activity|0004326||IEA,ATP binding|0005524||IEA,ligase activity|0016874||IEA;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368109.1;locus_tag=L2557_RS13150;product=bifunctional tetrahydrofolate synthase/dihydrofolate synthase;protein_id=WP_099659400.1;transl_table=11 NZ_JAIKUA010000199.1 RefSeq gene 8604 9257 . + . ID=gene-L2557_RS13155;Name=dedD;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=L2557_RS13155 NZ_JAIKUA010000199.1 Protein Homology CDS 8604 9257 . + 0 ID=cds-WP_191901380.1;Parent=gene-L2557_RS13155;Dbxref=GenBank:WP_191901380.1;Name=WP_191901380.1;Ontology_term=GO:0032506,GO:0042834,GO:0030428;gbkey=CDS;gene=dedD;go_component=cell septum|0030428||IEA;go_function=peptidoglycan binding|0042834||IEA;go_process=cytokinetic process|0032506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827871.1;locus_tag=L2557_RS13155;product=cell division protein DedD;protein_id=WP_191901380.1;transl_table=11 NZ_JAIKUA010000199.1 RefSeq gene 9443 9934 . + . ID=gene-L2557_RS13160;Name=cvpA;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=L2557_RS13160 NZ_JAIKUA010000199.1 Protein Homology CDS 9443 9934 . + 0 ID=cds-WP_023581692.1;Parent=gene-L2557_RS13160;Dbxref=GenBank:WP_023581692.1;Name=WP_023581692.1;gbkey=CDS;gene=cvpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243731.1;locus_tag=L2557_RS13160;product=colicin V production protein;protein_id=WP_023581692.1;transl_table=11 NZ_JAIKUA010000199.1 RefSeq gene 9965 11482 . + . ID=gene-L2557_RS13165;Name=purF;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=L2557_RS13165 NZ_JAIKUA010000199.1 Protein Homology CDS 9965 11482 . + 0 ID=cds-WP_075670606.1;Parent=gene-L2557_RS13165;Dbxref=GenBank:WP_075670606.1;Name=WP_075670606.1;Ontology_term=GO:0009113,GO:0004044;gbkey=CDS;gene=purF;go_function=amidophosphoribosyltransferase activity|0004044||IEA;go_process=purine nucleobase biosynthetic process|0009113||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820991.1;locus_tag=L2557_RS13165;product=amidophosphoribosyltransferase;protein_id=WP_075670606.1;transl_table=11 NZ_JAIKUA010000199.1 RefSeq gene 11602 12183 . + . ID=gene-L2557_RS13170;Name=L2557_RS13170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13170 NZ_JAIKUA010000199.1 Protein Homology CDS 11602 12183 . + 0 ID=cds-WP_109419072.1;Parent=gene-L2557_RS13170;Dbxref=GenBank:WP_109419072.1;Name=WP_109419072.1;Ontology_term=GO:0010181,GO:0016831,GO:0106141;gbkey=CDS;go_function=FMN binding|0010181||IEA,carboxy-lyase activity|0016831||IEA,flavin prenyltransferase activity|0106141||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243729.1;locus_tag=L2557_RS13170;product=UbiX family flavin prenyltransferase;protein_id=WP_109419072.1;transl_table=11 ##sequence-region NZ_JAIKUA010000002.1 1 23863 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000002.1 RefSeq region 1 23863 . + . ID=NZ_JAIKUA010000002.1:1..23863;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000002.1 RefSeq gene 74 502 . + . ID=gene-L2557_RS00135;Name=L2557_RS00135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00135 NZ_JAIKUA010000002.1 Protein Homology CDS 74 502 . + 0 ID=cds-WP_075671189.1;Parent=gene-L2557_RS00135;Dbxref=GenBank:WP_075671189.1;Name=WP_075671189.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368559.1;locus_tag=L2557_RS00135;product=hypothetical protein;protein_id=WP_075671189.1;transl_table=11 NZ_JAIKUA010000002.1 RefSeq gene 554 1306 . - . ID=gene-L2557_RS00140;Name=L2557_RS00140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00140 NZ_JAIKUA010000002.1 Protein Homology CDS 554 1306 . - 0 ID=cds-WP_235409713.1;Parent=gene-L2557_RS00140;Dbxref=GenBank:WP_235409713.1;Name=WP_235409713.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628630.1;locus_tag=L2557_RS00140;product=ABC transporter ATP-binding protein;protein_id=WP_235409713.1;transl_table=11 NZ_JAIKUA010000002.1 RefSeq gene 1331 2146 . - . ID=gene-L2557_RS00145;Name=L2557_RS00145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00145 NZ_JAIKUA010000002.1 Protein Homology CDS 1331 2146 . - 0 ID=cds-WP_075671185.1;Parent=gene-L2557_RS00145;Dbxref=GenBank:WP_075671185.1;Name=WP_075671185.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246731.1;locus_tag=L2557_RS00145;product=ABC transporter ATP-binding protein;protein_id=WP_075671185.1;transl_table=11 NZ_JAIKUA010000002.1 RefSeq gene 2124 2993 . - . ID=gene-L2557_RS00150;Name=opp1C;gbkey=Gene;gene=opp1C;gene_biotype=protein_coding;locus_tag=L2557_RS00150 NZ_JAIKUA010000002.1 Protein Homology CDS 2124 2993 . - 0 ID=cds-WP_075671183.1;Parent=gene-L2557_RS00150;Dbxref=GenBank:WP_075671183.1;Name=WP_075671183.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp1C;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368560.1;locus_tag=L2557_RS00150;product=nickel/cobalt ABC transporter permease;protein_id=WP_075671183.1;transl_table=11 NZ_JAIKUA010000002.1 RefSeq gene 2993 3922 . - . ID=gene-L2557_RS00155;Name=opp1B;gbkey=Gene;gene=opp1B;gene_biotype=protein_coding;locus_tag=L2557_RS00155 NZ_JAIKUA010000002.1 Protein Homology CDS 2993 3922 . - 0 ID=cds-WP_099659214.1;Parent=gene-L2557_RS00155;Dbxref=GenBank:WP_099659214.1;Name=WP_099659214.1;Ontology_term=GO:0140359,GO:0043190;gbkey=CDS;gene=opp1B;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013317200.1;locus_tag=L2557_RS00155;product=nickel/cobalt ABC transporter permease;protein_id=WP_099659214.1;transl_table=11 NZ_JAIKUA010000002.1 RefSeq gene 3994 5568 . - . ID=gene-L2557_RS00160;Name=nikA;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=L2557_RS00160 NZ_JAIKUA010000002.1 Protein Homology CDS 3994 5568 . - 0 ID=cds-WP_075671179.1;Parent=gene-L2557_RS00160;Dbxref=GenBank:WP_075671179.1;Name=WP_075671179.1;Ontology_term=GO:0015675,GO:0015413,GO:0016151,GO:0009897,GO:0030288,GO:0055052;gbkey=CDS;gene=nikA;go_component=external side of plasma membrane|0009897||IEA,outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type nickel transporter activity|0015413||IEA,nickel cation binding|0016151||IEA;go_process=nickel cation transport|0015675||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246728.1;locus_tag=L2557_RS00160;product=nickel ABC transporter substrate-binding protein;protein_id=WP_075671179.1;transl_table=11 NZ_JAIKUA010000002.1 RefSeq gene 5580 6365 . - . ID=gene-L2557_RS00165;Name=L2557_RS00165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00165 NZ_JAIKUA010000002.1 Protein Homology CDS 5580 6365 . - 0 ID=cds-WP_075671177.1;Parent=gene-L2557_RS00165;Dbxref=GenBank:WP_075671177.1;Name=WP_075671177.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246727.1;locus_tag=L2557_RS00165;product=class I SAM-dependent methyltransferase;protein_id=WP_075671177.1;transl_table=11 NZ_JAIKUA010000002.1 RefSeq gene 6778 8301 . + . ID=gene-L2557_RS00170;Name=L2557_RS00170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00170 NZ_JAIKUA010000002.1 Protein Homology CDS 6778 8301 . + 0 ID=cds-WP_099659215.1;Parent=gene-L2557_RS00170;Dbxref=GenBank:WP_099659215.1;Name=WP_099659215.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024909.6;locus_tag=L2557_RS00170;product=vWA domain-containing protein;protein_id=WP_099659215.1;transl_table=11 NZ_JAIKUA010000002.1 RefSeq gene 8881 10356 . + . ID=gene-L2557_RS00175;Name=L2557_RS00175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00175 NZ_JAIKUA010000002.1 Protein Homology CDS 8881 10356 . + 0 ID=cds-WP_252447043.1;Parent=gene-L2557_RS00175;Dbxref=GenBank:WP_252447043.1;Name=WP_252447043.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012822248.1;locus_tag=L2557_RS00175;product=SrfA family protein;protein_id=WP_252447043.1;transl_table=11 NZ_JAIKUA010000002.1 RefSeq gene 10360 13344 . + . ID=gene-L2557_RS00180;Name=L2557_RS00180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00180 NZ_JAIKUA010000002.1 Protein Homology CDS 10360 13344 . + 0 ID=cds-WP_075671169.1;Parent=gene-L2557_RS00180;Dbxref=GenBank:WP_075671169.1;Name=WP_075671169.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011093775.1;locus_tag=L2557_RS00180;product=virulence factor SrfB;protein_id=WP_075671169.1;transl_table=11 NZ_JAIKUA010000002.1 RefSeq gene 13347 16052 . + . ID=gene-L2557_RS00185;Name=L2557_RS00185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00185 NZ_JAIKUA010000002.1 Protein Homology CDS 13347 16052 . + 0 ID=cds-WP_223673782.1;Parent=gene-L2557_RS00185;Dbxref=GenBank:WP_223673782.1;Name=WP_223673782.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534513.1;locus_tag=L2557_RS00185;product=putative virulence factor;protein_id=WP_223673782.1;transl_table=11 NZ_JAIKUA010000002.1 RefSeq gene 16056 17066 . + . ID=gene-L2557_RS00190;Name=L2557_RS00190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00190 NZ_JAIKUA010000002.1 GeneMarkS-2+ CDS 16056 17066 . + 0 ID=cds-WP_075671165.1;Parent=gene-L2557_RS00190;Dbxref=GenBank:WP_075671165.1;Name=WP_075671165.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS00190;product=hypothetical protein;protein_id=WP_075671165.1;transl_table=11 NZ_JAIKUA010000002.1 RefSeq gene 17076 19079 . + . ID=gene-L2557_RS00195;Name=L2557_RS00195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00195 NZ_JAIKUA010000002.1 Protein Homology CDS 17076 19079 . + 0 ID=cds-WP_075671163.1;Parent=gene-L2557_RS00195;Dbxref=GenBank:WP_075671163.1;Name=WP_075671163.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012987696.1;locus_tag=L2557_RS00195;product=vWA domain-containing protein;protein_id=WP_075671163.1;transl_table=11 NZ_JAIKUA010000002.1 RefSeq gene 19079 19771 . + . ID=gene-L2557_RS00200;Name=L2557_RS00200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00200 NZ_JAIKUA010000002.1 Protein Homology CDS 19079 19771 . + 0 ID=cds-WP_075671161.1;Parent=gene-L2557_RS00200;Dbxref=GenBank:WP_075671161.1;Name=WP_075671161.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906510.1;locus_tag=L2557_RS00200;product=ABC transporter ATP-binding protein;protein_id=WP_075671161.1;transl_table=11 NZ_JAIKUA010000002.1 RefSeq gene 19752 20987 . + . ID=gene-L2557_RS00205;Name=L2557_RS00205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00205 NZ_JAIKUA010000002.1 Protein Homology CDS 19752 20987 . + 0 ID=cds-WP_235409715.1;Parent=gene-L2557_RS00205;Dbxref=GenBank:WP_235409715.1;Name=WP_235409715.1;Ontology_term=GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012987694.1;locus_tag=L2557_RS00205;product=ABC transporter permease;protein_id=WP_235409715.1;transl_table=11 NZ_JAIKUA010000002.1 RefSeq gene 20977 22533 . + . ID=gene-L2557_RS00210;Name=L2557_RS00210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00210 NZ_JAIKUA010000002.1 Protein Homology CDS 20977 22533 . + 0 ID=cds-WP_171455353.1;Parent=gene-L2557_RS00210;Dbxref=GenBank:WP_171455353.1;Name=WP_171455353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906508.1;locus_tag=L2557_RS00210;product=formylglycine-generating enzyme family protein;protein_id=WP_171455353.1;transl_table=11 NZ_JAIKUA010000002.1 RefSeq gene 22558 23241 . + . ID=gene-L2557_RS00215;Name=L2557_RS00215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00215 NZ_JAIKUA010000002.1 Protein Homology CDS 22558 23241 . + 0 ID=cds-WP_075671155.1;Parent=gene-L2557_RS00215;Dbxref=GenBank:WP_075671155.1;Name=WP_075671155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534503.1;locus_tag=L2557_RS00215;product=hypothetical protein;protein_id=WP_075671155.1;transl_table=11 NZ_JAIKUA010000002.1 RefSeq gene 23259 23747 . + . ID=gene-L2557_RS00220;Name=L2557_RS00220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00220 NZ_JAIKUA010000002.1 Protein Homology CDS 23259 23747 . + 0 ID=cds-WP_223672652.1;Parent=gene-L2557_RS00220;Dbxref=GenBank:WP_223672652.1;Name=WP_223672652.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906506.1;locus_tag=L2557_RS00220;product=hypothetical protein;protein_id=WP_223672652.1;transl_table=11 ##sequence-region NZ_JAIKUA010000020.1 1 22741 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000020.1 RefSeq region 1 22741 . + . ID=NZ_JAIKUA010000020.1:1..22741;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000020.1 RefSeq gene 57 542 . + . ID=gene-L2557_RS02130;Name=L2557_RS02130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02130 NZ_JAIKUA010000020.1 Protein Homology CDS 57 542 . + 0 ID=cds-WP_180272990.1;Parent=gene-L2557_RS02130;Dbxref=GenBank:WP_180272990.1;Name=WP_180272990.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024895.6;locus_tag=L2557_RS02130;product=outer membrane beta-barrel protein;protein_id=WP_180272990.1;transl_table=11 NZ_JAIKUA010000020.1 RefSeq gene 648 1409 . - . ID=gene-L2557_RS02135;Name=chbG;gbkey=Gene;gene=chbG;gene_biotype=protein_coding;locus_tag=L2557_RS02135 NZ_JAIKUA010000020.1 Protein Homology CDS 648 1409 . - 0 ID=cds-WP_099659221.1;Parent=gene-L2557_RS02135;Dbxref=GenBank:WP_099659221.1;Name=WP_099659221.1;Ontology_term=GO:0000272,GO:0016811;gbkey=CDS;gene=chbG;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds%2C in linear amides|0016811||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246724.1;locus_tag=L2557_RS02135;product=chitin disaccharide deacetylase;protein_id=WP_099659221.1;transl_table=11 NZ_JAIKUA010000020.1 RefSeq gene 1446 2801 . - . ID=gene-L2557_RS02140;Name=L2557_RS02140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02140 NZ_JAIKUA010000020.1 Protein Homology CDS 1446 2801 . - 0 ID=cds-WP_075674008.1;Parent=gene-L2557_RS02140;Dbxref=GenBank:WP_075674008.1;Name=WP_075674008.1;Ontology_term=GO:0005975,GO:0008706,GO:0046872;gbkey=CDS;go_function=6-phospho-beta-glucosidase activity|0008706||IEA,metal ion binding|0046872||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534496.1;locus_tag=L2557_RS02140;product=6-phospho-beta-glucosidase;protein_id=WP_075674008.1;transl_table=11 NZ_JAIKUA010000020.1 RefSeq gene 2962 3819 . - . ID=gene-L2557_RS02145;Name=chbR;gbkey=Gene;gene=chbR;gene_biotype=protein_coding;locus_tag=L2557_RS02145 NZ_JAIKUA010000020.1 Protein Homology CDS 2962 3819 . - 0 ID=cds-WP_075674007.1;Parent=gene-L2557_RS02145;Dbxref=GenBank:WP_075674007.1;Name=WP_075674007.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=chbR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250025.1;locus_tag=L2557_RS02145;product=transcriptional regulator ChbR;protein_id=WP_075674007.1;transl_table=11 NZ_JAIKUA010000020.1 RefSeq gene 3821 4168 . - . ID=gene-L2557_RS02150;Name=chbA;gbkey=Gene;gene=chbA;gene_biotype=protein_coding;locus_tag=L2557_RS02150 NZ_JAIKUA010000020.1 Protein Homology CDS 3821 4168 . - 0 ID=cds-WP_075674006.1;Parent=gene-L2557_RS02150;Dbxref=GenBank:WP_075674006.1;Name=WP_075674006.1;gbkey=CDS;gene=chbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000459882.1;locus_tag=L2557_RS02150;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIA;protein_id=WP_075674006.1;transl_table=11 NZ_JAIKUA010000020.1 RefSeq gene 4229 5587 . - . ID=gene-L2557_RS02155;Name=chbC;gbkey=Gene;gene=chbC;gene_biotype=protein_coding;locus_tag=L2557_RS02155 NZ_JAIKUA010000020.1 Protein Homology CDS 4229 5587 . - 0 ID=cds-WP_075674005.1;Parent=gene-L2557_RS02155;Dbxref=GenBank:WP_075674005.1;Name=WP_075674005.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;gene=chbC;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416251.1;locus_tag=L2557_RS02155;product=PTS N%2CN'-diacetylchitobiose transporter subunit IIC;protein_id=WP_075674005.1;transl_table=11 NZ_JAIKUA010000020.1 RefSeq gene 5683 6009 . - . ID=gene-L2557_RS02160;Name=L2557_RS02160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02160 NZ_JAIKUA010000020.1 Protein Homology CDS 5683 6009 . - 0 ID=cds-WP_069369489.1;Parent=gene-L2557_RS02160;Dbxref=GenBank:WP_069369489.1;Name=WP_069369489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534491.1;locus_tag=L2557_RS02160;product=PTS sugar transporter subunit IIB;protein_id=WP_069369489.1;transl_table=11 NZ_JAIKUA010000020.1 RefSeq gene 6462 7421 . + . ID=gene-L2557_RS02165;Name=L2557_RS02165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02165 NZ_JAIKUA010000020.1 Protein Homology CDS 6462 7421 . + 0 ID=cds-WP_075674004.1;Parent=gene-L2557_RS02165;Dbxref=GenBank:WP_075674004.1;Name=WP_075674004.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368567.1;locus_tag=L2557_RS02165;product=siderophore ABC transporter substrate-binding protein;protein_id=WP_075674004.1;transl_table=11 NZ_JAIKUA010000020.1 RefSeq gene 7431 8393 . + . ID=gene-L2557_RS02170;Name=L2557_RS02170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02170 NZ_JAIKUA010000020.1 Protein Homology CDS 7431 8393 . + 0 ID=cds-WP_075674003.1;Parent=gene-L2557_RS02170;Dbxref=GenBank:WP_075674003.1;Name=WP_075674003.1;Ontology_term=GO:0006826,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246712.1;locus_tag=L2557_RS02170;product=ABC transporter permease;protein_id=WP_075674003.1;transl_table=11 NZ_JAIKUA010000020.1 RefSeq gene 8380 9387 . + . ID=gene-L2557_RS02175;Name=L2557_RS02175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02175 NZ_JAIKUA010000020.1 Protein Homology CDS 8380 9387 . + 0 ID=cds-WP_075674002.1;Parent=gene-L2557_RS02175;Dbxref=GenBank:WP_075674002.1;Name=WP_075674002.1;Ontology_term=GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246711.1;locus_tag=L2557_RS02175;product=iron chelate uptake ABC transporter family permease subunit;protein_id=WP_075674002.1;transl_table=11 NZ_JAIKUA010000020.1 RefSeq gene 9389 10144 . + . ID=gene-L2557_RS02180;Name=L2557_RS02180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02180 NZ_JAIKUA010000020.1 Protein Homology CDS 9389 10144 . + 0 ID=cds-WP_075674001.1;Parent=gene-L2557_RS02180;Dbxref=GenBank:WP_075674001.1;Name=WP_075674001.1;Ontology_term=GO:0006826,GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246710.1;locus_tag=L2557_RS02180;product=iron ABC transporter ATP-binding protein;protein_id=WP_075674001.1;transl_table=11 NZ_JAIKUA010000020.1 RefSeq gene 10208 10762 . - . ID=gene-L2557_RS02185;Name=L2557_RS02185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02185 NZ_JAIKUA010000020.1 Protein Homology CDS 10208 10762 . - 0 ID=cds-WP_075674000.1;Parent=gene-L2557_RS02185;Dbxref=GenBank:WP_075674000.1;Name=WP_075674000.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534485.1;locus_tag=L2557_RS02185;product=TetR/AcrR family transcriptional regulator;protein_id=WP_075674000.1;transl_table=11 NZ_JAIKUA010000020.1 RefSeq gene 10849 12348 . + . ID=gene-L2557_RS02190;Name=L2557_RS02190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02190 NZ_JAIKUA010000020.1 Protein Homology CDS 10849 12348 . + 0 ID=cds-WP_075673999.1;Parent=gene-L2557_RS02190;Dbxref=GenBank:WP_075673999.1;Name=WP_075673999.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249028.1;locus_tag=L2557_RS02190;product=MFS transporter;protein_id=WP_075673999.1;transl_table=11 NZ_JAIKUA010000020.1 RefSeq gene 12417 13202 . - . ID=gene-L2557_RS02195;Name=L2557_RS02195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02195 NZ_JAIKUA010000020.1 Protein Homology CDS 12417 13202 . - 0 ID=cds-WP_075674011.1;Parent=gene-L2557_RS02195;Dbxref=GenBank:WP_075674011.1;Name=WP_075674011.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004238912.1;locus_tag=L2557_RS02195;product=AraC family transcriptional regulator;protein_id=WP_075674011.1;transl_table=11 NZ_JAIKUA010000020.1 RefSeq gene 13650 16070 . + . ID=gene-L2557_RS02200;Name=L2557_RS02200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02200 NZ_JAIKUA010000020.1 Protein Homology CDS 13650 16070 . + 0 ID=cds-WP_075673998.1;Parent=gene-L2557_RS02200;Dbxref=GenBank:WP_075673998.1;Name=WP_075673998.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368568.1;locus_tag=L2557_RS02200;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_075673998.1;transl_table=11 NZ_JAIKUA010000020.1 RefSeq gene 16067 16708 . + . ID=gene-L2557_RS02205;Name=L2557_RS02205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02205 NZ_JAIKUA010000020.1 Protein Homology CDS 16067 16708 . + 0 ID=cds-WP_075673997.1;Parent=gene-L2557_RS02205;Dbxref=GenBank:WP_075673997.1;Name=WP_075673997.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827138.1;locus_tag=L2557_RS02205;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_075673997.1;transl_table=11 NZ_JAIKUA010000020.1 RefSeq gene 16705 17604 . + . ID=gene-L2557_RS02210;Name=L2557_RS02210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02210 NZ_JAIKUA010000020.1 Protein Homology CDS 16705 17604 . + 0 ID=cds-WP_075673996.1;Parent=gene-L2557_RS02210;Dbxref=GenBank:WP_075673996.1;Name=WP_075673996.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368569.1;locus_tag=L2557_RS02210;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_075673996.1;transl_table=11 NZ_JAIKUA010000020.1 RefSeq gene 17684 18253 . + . ID=gene-L2557_RS02215;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=L2557_RS02215 NZ_JAIKUA010000020.1 Protein Homology CDS 17684 18253 . + 0 ID=cds-WP_099659225.1;Parent=gene-L2557_RS02215;Dbxref=GenBank:WP_099659225.1;Name=WP_099659225.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004238907.1;locus_tag=L2557_RS02215;product=Tat proofreading chaperone DmsD;protein_id=WP_099659225.1;transl_table=11 NZ_JAIKUA010000020.1 RefSeq gene 18353 19870 . - . ID=gene-L2557_RS02220;Name=norR;gbkey=Gene;gene=norR;gene_biotype=protein_coding;locus_tag=L2557_RS02220 NZ_JAIKUA010000020.1 Protein Homology CDS 18353 19870 . - 0 ID=cds-WP_075673994.1;Parent=gene-L2557_RS02220;Dbxref=GenBank:WP_075673994.1;Name=WP_075673994.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=norR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461760.1;locus_tag=L2557_RS02220;product=nitric oxide reductase transcriptional regulator NorR;protein_id=WP_075673994.1;transl_table=11 NZ_JAIKUA010000020.1 RefSeq gene 20061 21509 . + . ID=gene-L2557_RS02225;Name=norV;gbkey=Gene;gene=norV;gene_biotype=protein_coding;locus_tag=L2557_RS02225 NZ_JAIKUA010000020.1 Protein Homology CDS 20061 21509 . + 0 ID=cds-WP_075673993.1;Parent=gene-L2557_RS02225;Dbxref=GenBank:WP_075673993.1;Name=WP_075673993.1;Ontology_term=GO:0009055,GO:0010181,GO:0016966,GO:0046872;gbkey=CDS;gene=norV;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,nitric oxide reductase activity|0016966||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_708517.1;locus_tag=L2557_RS02225;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=WP_075673993.1;transl_table=11 NZ_JAIKUA010000020.1 RefSeq gene 21506 22660 . + . ID=gene-L2557_RS02230;Name=norW;gbkey=Gene;gene=norW;gene_biotype=protein_coding;locus_tag=L2557_RS02230 NZ_JAIKUA010000020.1 Protein Homology CDS 21506 22660 . + 0 ID=cds-WP_075673992.1;Parent=gene-L2557_RS02230;Dbxref=GenBank:WP_075673992.1;Name=WP_075673992.1;Ontology_term=GO:0016731;gbkey=CDS;gene=norW;go_function=oxidoreductase activity%2C acting on iron-sulfur proteins as donors%2C NAD or NADP as acceptor|0016731||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012907220.1;locus_tag=L2557_RS02230;product=NADH:flavorubredoxin reductase NorW;protein_id=WP_075673992.1;transl_table=11 ##sequence-region NZ_JAIKUA010000200.1 1 8702 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000200.1 RefSeq region 1 8702 . + . ID=NZ_JAIKUA010000200.1:1..8702;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000200.1 RefSeq pseudogene 1 607 . - . ID=gene-L2557_RS13175;Name=L2557_RS13175;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS13175;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000200.1 Protein Homology CDS 1 607 . - 0 ID=cds-L2557_RS13175;Parent=gene-L2557_RS13175;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827056.1;locus_tag=L2557_RS13175;partial=true;product=acetyltransferase;pseudo=true;start_range=.,1;transl_table=11 NZ_JAIKUA010000200.1 RefSeq gene 935 2128 . + . ID=gene-L2557_RS13180;Name=L2557_RS13180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13180 NZ_JAIKUA010000200.1 Protein Homology CDS 935 2128 . + 0 ID=cds-WP_159241747.1;Parent=gene-L2557_RS13180;Dbxref=GenBank:WP_159241747.1;Name=WP_159241747.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245371.1;locus_tag=L2557_RS13180;product=cyanate transporter;protein_id=WP_159241747.1;transl_table=11 NZ_JAIKUA010000200.1 RefSeq gene 2221 3168 . - . ID=gene-L2557_RS13185;Name=L2557_RS13185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13185 NZ_JAIKUA010000200.1 Protein Homology CDS 2221 3168 . - 0 ID=cds-WP_235410124.1;Parent=gene-L2557_RS13185;Dbxref=GenBank:WP_235410124.1;Name=WP_235410124.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913111.1;locus_tag=L2557_RS13185;product=carbamate kinase family protein;protein_id=WP_235410124.1;transl_table=11 NZ_JAIKUA010000200.1 RefSeq gene 3492 4226 . - . ID=gene-L2557_RS13190;Name=L2557_RS13190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13190 NZ_JAIKUA010000200.1 Protein Homology CDS 3492 4226 . - 0 ID=cds-WP_109419283.1;Parent=gene-L2557_RS13190;Dbxref=GenBank:WP_109419283.1;Name=WP_109419283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535394.1;locus_tag=L2557_RS13190;product=glycerophosphoryl diester phosphodiesterase;protein_id=WP_109419283.1;transl_table=11 NZ_JAIKUA010000200.1 RefSeq gene 4401 5708 . + . ID=gene-L2557_RS13195;Name=ugpB;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=L2557_RS13195 NZ_JAIKUA010000200.1 Protein Homology CDS 4401 5708 . + 0 ID=cds-WP_235410125.1;Parent=gene-L2557_RS13195;Dbxref=GenBank:WP_235410125.1;Name=WP_235410125.1;Ontology_term=GO:0055085;gbkey=CDS;gene=ugpB;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012886609.1;locus_tag=L2557_RS13195;product=sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB;protein_id=WP_235410125.1;transl_table=11 NZ_JAIKUA010000200.1 RefSeq gene 5771 6655 . + . ID=gene-L2557_RS13200;Name=ugpA;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=L2557_RS13200 NZ_JAIKUA010000200.1 Protein Homology CDS 5771 6655 . + 0 ID=cds-WP_075674171.1;Parent=gene-L2557_RS13200;Dbxref=GenBank:WP_075674171.1;Name=WP_075674171.1;gbkey=CDS;gene=ugpA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252723.1;locus_tag=L2557_RS13200;product=sn-glycerol-3-phosphate ABC transporter permease UgpA;protein_id=WP_075674171.1;transl_table=11 NZ_JAIKUA010000200.1 RefSeq gene 6655 7503 . + . ID=gene-L2557_RS13205;Name=ugpE;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=L2557_RS13205 NZ_JAIKUA010000200.1 Protein Homology CDS 6655 7503 . + 0 ID=cds-WP_099660025.1;Parent=gene-L2557_RS13205;Dbxref=GenBank:WP_099660025.1;Name=WP_099660025.1;Ontology_term=GO:0015794,GO:0005886,GO:0055052;gbkey=CDS;gene=ugpE;go_component=plasma membrane|0005886||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211522.1;locus_tag=L2557_RS13205;product=sn-glycerol-3-phosphate ABC transporter permease UgpE;protein_id=WP_099660025.1;transl_table=11 NZ_JAIKUA010000200.1 RefSeq gene 7505 8605 . + . ID=gene-L2557_RS13210;Name=ugpC;gbkey=Gene;gene=ugpC;gene_biotype=protein_coding;locus_tag=L2557_RS13210 NZ_JAIKUA010000200.1 Protein Homology CDS 7505 8605 . + 0 ID=cds-WP_156733014.1;Parent=gene-L2557_RS13210;Dbxref=GenBank:WP_156733014.1;Name=WP_156733014.1;Ontology_term=GO:0005524,GO:0140359;gbkey=CDS;gene=ugpC;go_function=ATP binding|0005524||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827053.1;locus_tag=L2557_RS13210;product=sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC;protein_id=WP_156733014.1;transl_table=11 ##sequence-region NZ_JAIKUA010000201.1 1 4867 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000201.1 RefSeq region 1 4867 . + . ID=NZ_JAIKUA010000201.1:1..4867;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000201.1 RefSeq gene 1 829 . + . ID=gene-L2557_RS13215;Name=L2557_RS13215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13215;partial=true;start_range=.,1 NZ_JAIKUA010000201.1 Protein Homology CDS 1 829 . + 1 ID=cds-WP_235410126.1;Parent=gene-L2557_RS13215;Dbxref=GenBank:WP_235410126.1;Name=WP_235410126.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247320.1;locus_tag=L2557_RS13215;partial=true;product=fimbria/pilus outer membrane usher protein;protein_id=WP_235410126.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000201.1 RefSeq gene 875 1633 . + . ID=gene-L2557_RS13220;Name=L2557_RS13220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13220 NZ_JAIKUA010000201.1 Protein Homology CDS 875 1633 . + 0 ID=cds-WP_075674090.1;Parent=gene-L2557_RS13220;Dbxref=GenBank:WP_075674090.1;Name=WP_075674090.1;Ontology_term=GO:0071555,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244924.1;locus_tag=L2557_RS13220;product=fimbria/pilus periplasmic chaperone;protein_id=WP_075674090.1;transl_table=11 NZ_JAIKUA010000201.1 RefSeq gene 1645 2202 . + . ID=gene-L2557_RS13225;Name=L2557_RS13225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13225 NZ_JAIKUA010000201.1 Protein Homology CDS 1645 2202 . + 0 ID=cds-WP_075674091.1;Parent=gene-L2557_RS13225;Dbxref=GenBank:WP_075674091.1;Name=WP_075674091.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244923.1;locus_tag=L2557_RS13225;product=fimbrial protein;protein_id=WP_075674091.1;transl_table=11 NZ_JAIKUA010000201.1 RefSeq gene 2215 2712 . + . ID=gene-L2557_RS13230;Name=L2557_RS13230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13230 NZ_JAIKUA010000201.1 Protein Homology CDS 2215 2712 . + 0 ID=cds-WP_223672759.1;Parent=gene-L2557_RS13230;Dbxref=GenBank:WP_223672759.1;Name=WP_223672759.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367528.1;locus_tag=L2557_RS13230;product=fimbrial protein;protein_id=WP_223672759.1;transl_table=11 NZ_JAIKUA010000201.1 RefSeq gene 2723 3274 . + . ID=gene-L2557_RS13235;Name=L2557_RS13235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13235 NZ_JAIKUA010000201.1 Protein Homology CDS 2723 3274 . + 0 ID=cds-WP_075674092.1;Parent=gene-L2557_RS13235;Dbxref=GenBank:WP_075674092.1;Name=WP_075674092.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367529.1;locus_tag=L2557_RS13235;product=fimbrial protein;protein_id=WP_075674092.1;transl_table=11 NZ_JAIKUA010000201.1 RefSeq gene 3295 4149 . + . ID=gene-L2557_RS13240;Name=L2557_RS13240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13240 NZ_JAIKUA010000201.1 Protein Homology CDS 3295 4149 . + 0 ID=cds-WP_075674093.1;Parent=gene-L2557_RS13240;Dbxref=GenBank:WP_075674093.1;Name=WP_075674093.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628307.1;locus_tag=L2557_RS13240;product=MrpH family fimbial adhesin;protein_id=WP_075674093.1;transl_table=11 NZ_JAIKUA010000201.1 RefSeq gene 4170 4487 . + . ID=gene-L2557_RS13245;Name=L2557_RS13245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13245 NZ_JAIKUA010000201.1 Protein Homology CDS 4170 4487 . + 0 ID=cds-WP_075674094.1;Parent=gene-L2557_RS13245;Dbxref=GenBank:WP_075674094.1;Name=WP_075674094.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534889.1;locus_tag=L2557_RS13245;product=helix-turn-helix domain-containing protein;protein_id=WP_075674094.1;transl_table=11 ##sequence-region NZ_JAIKUA010000202.1 1 8458 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000202.1 RefSeq region 1 8458 . + . ID=NZ_JAIKUA010000202.1:1..8458;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000202.1 RefSeq gene 221 1405 . - . ID=gene-L2557_RS13250;Name=L2557_RS13250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13250 NZ_JAIKUA010000202.1 Protein Homology CDS 221 1405 . - 0 ID=cds-WP_229581648.1;Parent=gene-L2557_RS13250;Dbxref=GenBank:WP_229581648.1;Name=WP_229581648.1;Ontology_term=GO:0042908,GO:1990961,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA,xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247802.1;locus_tag=L2557_RS13250;product=Bcr/CflA family multidrug efflux MFS transporter;protein_id=WP_229581648.1;transl_table=11 NZ_JAIKUA010000202.1 RefSeq gene 1443 2147 . - . ID=gene-L2557_RS13255;Name=rsuA;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=L2557_RS13255 NZ_JAIKUA010000202.1 Protein Homology CDS 1443 2147 . - 0 ID=cds-WP_075673585.1;Parent=gene-L2557_RS13255;Dbxref=GenBank:WP_075673585.1;Name=WP_075673585.1;gbkey=CDS;gene=rsuA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247801.1;locus_tag=L2557_RS13255;product=16S rRNA pseudouridine(516) synthase RsuA;protein_id=WP_075673585.1;transl_table=11 NZ_JAIKUA010000202.1 RefSeq gene 2328 4091 . + . ID=gene-L2557_RS13260;Name=L2557_RS13260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13260 NZ_JAIKUA010000202.1 Protein Homology CDS 2328 4091 . + 0 ID=cds-WP_235410127.1;Parent=gene-L2557_RS13260;Dbxref=GenBank:WP_235410127.1;Name=WP_235410127.1;Ontology_term=GO:0003676,GO:0004386,GO:0005524,GO:0016887;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,helicase activity|0004386||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012989293.1;locus_tag=L2557_RS13260;product=DEAD/DEAH box helicase;protein_id=WP_235410127.1;transl_table=11 NZ_JAIKUA010000202.1 RefSeq gene 4232 4516 . + . ID=gene-L2557_RS13265;Name=rplY;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=L2557_RS13265 NZ_JAIKUA010000202.1 Protein Homology CDS 4232 4516 . + 0 ID=cds-WP_023581385.1;Parent=gene-L2557_RS13265;Dbxref=GenBank:WP_023581385.1;Name=WP_023581385.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplY;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000494192.1;locus_tag=L2557_RS13265;product=50S ribosomal protein L25;protein_id=WP_023581385.1;transl_table=11 NZ_JAIKUA010000202.1 RefSeq gene 4599 5603 . - . ID=gene-L2557_RS13270;Name=yejK;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=L2557_RS13270 NZ_JAIKUA010000202.1 Protein Homology CDS 4599 5603 . - 0 ID=cds-WP_099660745.1;Parent=gene-L2557_RS13270;Dbxref=GenBank:WP_099660745.1;Name=WP_099660745.1;Ontology_term=GO:0009295;gbkey=CDS;gene=yejK;go_component=nucleoid|0009295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247043.1;locus_tag=L2557_RS13270;product=nucleoid-associated protein YejK;protein_id=WP_099660745.1;transl_table=11 NZ_JAIKUA010000202.1 RefSeq gene 5759 5986 . + . ID=gene-L2557_RS13275;Name=L2557_RS13275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13275 NZ_JAIKUA010000202.1 Protein Homology CDS 5759 5986 . + 0 ID=cds-WP_004247042.1;Parent=gene-L2557_RS13275;Dbxref=GenBank:WP_004247042.1;Name=WP_004247042.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311106.1;locus_tag=L2557_RS13275;product=YejL family protein;protein_id=WP_004247042.1;transl_table=11 NZ_JAIKUA010000202.1 RefSeq gene 6013 7749 . + . ID=gene-L2557_RS13280;Name=yejM;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=L2557_RS13280 NZ_JAIKUA010000202.1 Protein Homology CDS 6013 7749 . + 0 ID=cds-WP_099660746.1;Parent=gene-L2557_RS13280;Dbxref=GenBank:WP_099660746.1;Name=WP_099660746.1;Ontology_term=GO:0008484;gbkey=CDS;gene=yejM;go_function=sulfuric ester hydrolase activity|0008484||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367752.1;locus_tag=L2557_RS13280;product=LPS biosynthesis-modulating metalloenzyme YejM;protein_id=WP_099660746.1;transl_table=11 NZ_JAIKUA010000202.1 RefSeq gene 7836 7912 . + . ID=gene-L2557_RS13285;Name=L2557_RS13285;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS13285 NZ_JAIKUA010000202.1 tRNAscan-SE tRNA 7836 7912 . + . ID=rna-L2557_RS13285;Parent=gene-L2557_RS13285;anticodon=(pos:7870..7872);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS13285;product=tRNA-Pro NZ_JAIKUA010000202.1 tRNAscan-SE exon 7836 7912 . + . ID=exon-L2557_RS13285-1;Parent=rna-L2557_RS13285;anticodon=(pos:7870..7872);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS13285;product=tRNA-Pro NZ_JAIKUA010000202.1 RefSeq gene 8127 8369 . + . ID=gene-L2557_RS13290;Name=L2557_RS13290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13290 NZ_JAIKUA010000202.1 Protein Homology CDS 8127 8369 . + 0 ID=cds-WP_099660747.1;Parent=gene-L2557_RS13290;Dbxref=GenBank:WP_099660747.1;Name=WP_099660747.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250616.1;locus_tag=L2557_RS13290;product=hypothetical protein;protein_id=WP_099660747.1;transl_table=11 ##sequence-region NZ_JAIKUA010000203.1 1 24905 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000203.1 RefSeq region 1 24905 . + . ID=NZ_JAIKUA010000203.1:1..24905;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000203.1 RefSeq gene 533 3199 . - . ID=gene-L2557_RS13295;Name=adhE;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;gene_synonym=adhC;locus_tag=L2557_RS13295 NZ_JAIKUA010000203.1 Protein Homology CDS 533 3199 . - 0 ID=cds-WP_099660526.1;Parent=gene-L2557_RS13295;Dbxref=GenBank:WP_099660526.1;Name=WP_099660526.1;Ontology_term=GO:0006066,GO:0015976,GO:0004022,GO:0016620,GO:0046872;gbkey=CDS;gene=adhE;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA,metal ion binding|0046872||IEA;go_process=alcohol metabolic process|0006066||IEA,carbon utilization|0015976||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243246.1;locus_tag=L2557_RS13295;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=WP_099660526.1;transl_table=11 NZ_JAIKUA010000203.1 RefSeq gene 3714 4358 . + . ID=gene-L2557_RS13300;Name=L2557_RS13300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13300 NZ_JAIKUA010000203.1 Protein Homology CDS 3714 4358 . + 0 ID=cds-WP_099660525.1;Parent=gene-L2557_RS13300;Dbxref=GenBank:WP_099660525.1;Name=WP_099660525.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243244.1;locus_tag=L2557_RS13300;product=YchE family NAAT transporter;protein_id=WP_099660525.1;transl_table=11 NZ_JAIKUA010000203.1 RefSeq gene 4467 5183 . - . ID=gene-L2557_RS13305;Name=L2557_RS13305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13305 NZ_JAIKUA010000203.1 Protein Homology CDS 4467 5183 . - 0 ID=cds-WP_180273037.1;Parent=gene-L2557_RS13305;Dbxref=GenBank:WP_180273037.1;Name=WP_180273037.1;Ontology_term=GO:0005524,GO:0016887,GO:0022857,GO:0042626,GO:0140359,GO:0043190;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,transmembrane transporter activity|0022857||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209297.1;locus_tag=L2557_RS13305;product=ABC transporter ATP-binding protein;protein_id=WP_180273037.1;transl_table=11 NZ_JAIKUA010000203.1 RefSeq gene 5170 6006 . - . ID=gene-L2557_RS13310;Name=L2557_RS13310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13310 NZ_JAIKUA010000203.1 Protein Homology CDS 5170 6006 . - 0 ID=cds-WP_075673955.1;Parent=gene-L2557_RS13310;Dbxref=GenBank:WP_075673955.1;Name=WP_075673955.1;Ontology_term=GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243241.1;locus_tag=L2557_RS13310;product=ABC transporter ATP-binding protein;protein_id=WP_075673955.1;transl_table=11 NZ_JAIKUA010000203.1 RefSeq gene 5999 6829 . - . ID=gene-L2557_RS13315;Name=L2557_RS13315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13315 NZ_JAIKUA010000203.1 Protein Homology CDS 5999 6829 . - 0 ID=cds-WP_099660523.1;Parent=gene-L2557_RS13315;Dbxref=GenBank:WP_099660523.1;Name=WP_099660523.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243239.1;locus_tag=L2557_RS13315;product=ABC transporter permease;protein_id=WP_099660523.1;transl_table=11 NZ_JAIKUA010000203.1 RefSeq gene 6829 7872 . - . ID=gene-L2557_RS13320;Name=L2557_RS13320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13320 NZ_JAIKUA010000203.1 Protein Homology CDS 6829 7872 . - 0 ID=cds-WP_075673953.1;Parent=gene-L2557_RS13320;Dbxref=GenBank:WP_075673953.1;Name=WP_075673953.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536438.1;locus_tag=L2557_RS13320;product=ABC transporter permease;protein_id=WP_075673953.1;transl_table=11 NZ_JAIKUA010000203.1 RefSeq gene 7952 9517 . - . ID=gene-L2557_RS13325;Name=L2557_RS13325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13325 NZ_JAIKUA010000203.1 Protein Homology CDS 7952 9517 . - 0 ID=cds-WP_075673952.1;Parent=gene-L2557_RS13325;Dbxref=GenBank:WP_075673952.1;Name=WP_075673952.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016946839.1;locus_tag=L2557_RS13325;product=ABC transporter substrate-binding protein;protein_id=WP_075673952.1;transl_table=11 NZ_JAIKUA010000203.1 RefSeq gene 10122 12668 . + . ID=gene-L2557_RS13330;Name=nirB;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=L2557_RS13330 NZ_JAIKUA010000203.1 Protein Homology CDS 10122 12668 . + 0 ID=cds-WP_235410128.1;Parent=gene-L2557_RS13330;Dbxref=GenBank:WP_235410128.1;Name=WP_235410128.1;Ontology_term=GO:0042128,GO:0008942,GO:0050660,GO:0050661;gbkey=CDS;gene=nirB;go_function=nitrite reductase [NAD(P)H] activity|0008942||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;go_process=nitrate assimilation|0042128||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628064.1;locus_tag=L2557_RS13330;product=nitrite reductase large subunit NirB;protein_id=WP_235410128.1;transl_table=11 NZ_JAIKUA010000203.1 RefSeq gene 12665 13009 . + . ID=gene-L2557_RS13335;Name=nirD;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=L2557_RS13335 NZ_JAIKUA010000203.1 Protein Homology CDS 12665 13009 . + 0 ID=cds-WP_099660521.1;Parent=gene-L2557_RS13335;Dbxref=GenBank:WP_099660521.1;Name=WP_099660521.1;gbkey=CDS;gene=nirD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008815495.1;locus_tag=L2557_RS13335;product=nitrite reductase small subunit NirD;protein_id=WP_099660521.1;transl_table=11 NZ_JAIKUA010000203.1 RefSeq gene 13024 14403 . + . ID=gene-L2557_RS13340;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=L2557_RS13340 NZ_JAIKUA010000203.1 Protein Homology CDS 13024 14403 . + 0 ID=cds-WP_099660520.1;Parent=gene-L2557_RS13340;Dbxref=GenBank:WP_099660520.1;Name=WP_099660520.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016930363.1;locus_tag=L2557_RS13340;product=siroheme synthase CysG;protein_id=WP_099660520.1;transl_table=11 NZ_JAIKUA010000203.1 RefSeq gene 15058 16695 . + . ID=gene-L2557_RS13345;Name=L2557_RS13345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13345 NZ_JAIKUA010000203.1 Protein Homology CDS 15058 16695 . + 0 ID=cds-WP_075673765.1;Parent=gene-L2557_RS13345;Dbxref=GenBank:WP_075673765.1;Name=WP_075673765.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368007.1;locus_tag=L2557_RS13345;product=ABC transporter substrate-binding protein;protein_id=WP_075673765.1;transl_table=11 NZ_JAIKUA010000203.1 RefSeq gene 16967 18604 . + . ID=gene-L2557_RS13350;Name=oppA;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=L2557_RS13350 NZ_JAIKUA010000203.1 Protein Homology CDS 16967 18604 . + 0 ID=cds-WP_075673766.1;Parent=gene-L2557_RS13350;Dbxref=GenBank:WP_075673766.1;Name=WP_075673766.1;Ontology_term=GO:0055085,GO:0043190;gbkey=CDS;gene=oppA;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248215.1;locus_tag=L2557_RS13350;product=oligopeptide ABC transporter substrate-binding protein OppA;protein_id=WP_075673766.1;transl_table=11 NZ_JAIKUA010000203.1 RefSeq gene 18684 19604 . + . ID=gene-L2557_RS13355;Name=oppB;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=L2557_RS13355 NZ_JAIKUA010000203.1 Protein Homology CDS 18684 19604 . + 0 ID=cds-WP_069368989.1;Parent=gene-L2557_RS13355;Dbxref=GenBank:WP_069368989.1;Name=WP_069368989.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=oppB;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005126405.1;locus_tag=L2557_RS13355;product=oligopeptide ABC transporter permease OppB;protein_id=WP_069368989.1;transl_table=11 NZ_JAIKUA010000203.1 RefSeq gene 19623 20531 . + . ID=gene-L2557_RS13360;Name=oppC;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=L2557_RS13360 NZ_JAIKUA010000203.1 Protein Homology CDS 19623 20531 . + 0 ID=cds-WP_023581989.1;Parent=gene-L2557_RS13360;Dbxref=GenBank:WP_023581989.1;Name=WP_023581989.1;Ontology_term=GO:0055085;gbkey=CDS;gene=oppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000979653.1;locus_tag=L2557_RS13360;product=oligopeptide ABC transporter permease OppC;protein_id=WP_023581989.1;transl_table=11 NZ_JAIKUA010000203.1 RefSeq gene 20542 21528 . + . ID=gene-L2557_RS13365;Name=oppD;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=L2557_RS13365 NZ_JAIKUA010000203.1 Protein Homology CDS 20542 21528 . + 0 ID=cds-WP_075673767.1;Parent=gene-L2557_RS13365;Dbxref=GenBank:WP_075673767.1;Name=WP_075673767.1;gbkey=CDS;gene=oppD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248213.1;locus_tag=L2557_RS13365;product=ABC transporter ATP-binding protein;protein_id=WP_075673767.1;transl_table=11 NZ_JAIKUA010000203.1 RefSeq gene 21525 22532 . + . ID=gene-L2557_RS13370;Name=oppF;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=L2557_RS13370 NZ_JAIKUA010000203.1 Protein Homology CDS 21525 22532 . + 0 ID=cds-WP_075673768.1;Parent=gene-L2557_RS13370;Dbxref=GenBank:WP_075673768.1;Name=WP_075673768.1;Ontology_term=GO:0015833,GO:0005524;gbkey=CDS;gene=oppF;go_function=ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368006.1;locus_tag=L2557_RS13370;product=murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF;protein_id=WP_075673768.1;transl_table=11 NZ_JAIKUA010000203.1 RefSeq gene 22635 24848 . - . ID=gene-L2557_RS13375;Name=L2557_RS13375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13375 NZ_JAIKUA010000203.1 Protein Homology CDS 22635 24848 . - 0 ID=cds-WP_159364049.1;Parent=gene-L2557_RS13375;Dbxref=GenBank:WP_159364049.1;Name=WP_159364049.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049695.2;locus_tag=L2557_RS13375;product=T6SS effector phospholipase Tle3 domain-containing protein;protein_id=WP_159364049.1;transl_table=11 ##sequence-region NZ_JAIKUA010000204.1 1 720 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000204.1 RefSeq region 1 720 . + . ID=NZ_JAIKUA010000204.1:1..720;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000204.1 RefSeq gene 70 681 . + . ID=gene-L2557_RS13380;Name=L2557_RS13380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13380 NZ_JAIKUA010000204.1 Protein Homology CDS 70 681 . + 0 ID=cds-WP_156734164.1;Parent=gene-L2557_RS13380;Dbxref=GenBank:WP_156734164.1;Name=WP_156734164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628514.1;locus_tag=L2557_RS13380;product=lytic polysaccharide monooxygenase;protein_id=WP_156734164.1;transl_table=11 ##sequence-region NZ_JAIKUA010000205.1 1 11702 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000205.1 RefSeq region 1 11702 . + . ID=NZ_JAIKUA010000205.1:1..11702;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000205.1 RefSeq gene 326 898 . - . ID=gene-L2557_RS13385;Name=dicD;gbkey=Gene;gene=dicD;gene_biotype=protein_coding;gene_synonym=yjdC;locus_tag=L2557_RS13385 NZ_JAIKUA010000205.1 Protein Homology CDS 326 898 . - 0 ID=cds-WP_235410129.1;Parent=gene-L2557_RS13385;Dbxref=GenBank:WP_235410129.1;Name=WP_235410129.1;Ontology_term=GO:0003700;gbkey=CDS;gene=dicD;go_function=DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005175574.1;locus_tag=L2557_RS13385;product=division control transcriptional repressor DicD;protein_id=WP_235410129.1;transl_table=11 NZ_JAIKUA010000205.1 RefSeq gene 1082 2407 . - . ID=gene-L2557_RS13390;Name=L2557_RS13390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13390 NZ_JAIKUA010000205.1 Protein Homology CDS 1082 2407 . - 0 ID=cds-WP_036934359.1;Parent=gene-L2557_RS13390;Dbxref=GenBank:WP_036934359.1;Name=WP_036934359.1;Ontology_term=GO:0015740,GO:0015556,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463189.1;locus_tag=L2557_RS13390;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_036934359.1;transl_table=11 NZ_JAIKUA010000205.1 RefSeq gene 2566 3990 . - . ID=gene-L2557_RS13395;Name=aspA;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=L2557_RS13395 NZ_JAIKUA010000205.1 Protein Homology CDS 2566 3990 . - 0 ID=cds-WP_072069056.1;Parent=gene-L2557_RS13395;Dbxref=GenBank:WP_072069056.1;Name=WP_072069056.1;Ontology_term=GO:0006520,GO:0008797;gbkey=CDS;gene=aspA;go_function=aspartate ammonia-lyase activity|0008797||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912525.1;locus_tag=L2557_RS13395;product=aspartate ammonia-lyase;protein_id=WP_072069056.1;transl_table=11 NZ_JAIKUA010000205.1 RefSeq gene 4365 4871 . + . ID=gene-L2557_RS13400;Name=L2557_RS13400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13400 NZ_JAIKUA010000205.1 Protein Homology CDS 4365 4871 . + 0 ID=cds-WP_075673432.1;Parent=gene-L2557_RS13400;Dbxref=GenBank:WP_075673432.1;Name=WP_075673432.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245719.1;locus_tag=L2557_RS13400;product=FxsA family protein;protein_id=WP_075673432.1;transl_table=11 NZ_JAIKUA010000205.1 RefSeq gene 5041 5334 . + . ID=gene-L2557_RS13405;Name=L2557_RS13405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13405 NZ_JAIKUA010000205.1 Protein Homology CDS 5041 5334 . + 0 ID=cds-WP_036914050.1;Parent=gene-L2557_RS13405;Dbxref=GenBank:WP_036914050.1;Name=WP_036914050.1;Ontology_term=GO:0005524,GO:0140662;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP-dependent protein folding chaperone|0140662||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000027827.1;locus_tag=L2557_RS13405;product=co-chaperone GroES;protein_id=WP_036914050.1;transl_table=11 NZ_JAIKUA010000205.1 RefSeq gene 5387 7033 . + . ID=gene-L2557_RS13410;Name=groL;gbkey=Gene;gene=groL;gene_biotype=protein_coding;locus_tag=L2557_RS13410 NZ_JAIKUA010000205.1 Protein Homology CDS 5387 7033 . + 0 ID=cds-WP_036934353.1;Parent=gene-L2557_RS13410;Dbxref=GenBank:WP_036934353.1;Name=WP_036934353.1;Note=60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds;Ontology_term=GO:0042026,GO:0140662;gbkey=CDS;gene=groL;go_function=ATP-dependent protein folding chaperone|0140662||IEA;go_process=protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120975.1;locus_tag=L2557_RS13410;product=chaperonin GroEL;protein_id=WP_036934353.1;transl_table=11 NZ_JAIKUA010000205.1 RefSeq gene 7223 8854 . + . ID=gene-L2557_RS13415;Name=L2557_RS13415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13415 NZ_JAIKUA010000205.1 Protein Homology CDS 7223 8854 . + 0 ID=cds-WP_075673433.1;Parent=gene-L2557_RS13415;Dbxref=GenBank:WP_075673433.1;Name=WP_075673433.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913784.1;locus_tag=L2557_RS13415;product=Na+/H+ antiporter;protein_id=WP_075673433.1;transl_table=11 NZ_JAIKUA010000205.1 RefSeq gene 9179 9523 . + . ID=gene-L2557_RS13420;Name=L2557_RS13420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13420 NZ_JAIKUA010000205.1 Protein Homology CDS 9179 9523 . + 0 ID=cds-WP_023582946.1;Parent=gene-L2557_RS13420;Dbxref=GenBank:WP_023582946.1;Name=WP_023582946.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536171.1;locus_tag=L2557_RS13420;product=DUF4156 domain-containing protein;protein_id=WP_023582946.1;transl_table=11 NZ_JAIKUA010000205.1 RefSeq gene 9630 10658 . - . ID=gene-L2557_RS13425;Name=epmB;gbkey=Gene;gene=epmB;gene_biotype=protein_coding;locus_tag=L2557_RS13425 NZ_JAIKUA010000205.1 Protein Homology CDS 9630 10658 . - 0 ID=cds-WP_075673434.1;Parent=gene-L2557_RS13425;Dbxref=GenBank:WP_075673434.1;Name=WP_075673434.1;gbkey=CDS;gene=epmB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015460786.1;locus_tag=L2557_RS13425;product=EF-P beta-lysylation protein EpmB;protein_id=WP_075673434.1;transl_table=11 NZ_JAIKUA010000205.1 RefSeq gene 10703 11269 . + . ID=gene-L2557_RS13430;Name=efp;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=L2557_RS13430 NZ_JAIKUA010000205.1 Protein Homology CDS 10703 11269 . + 0 ID=cds-WP_036934346.1;Parent=gene-L2557_RS13430;Dbxref=GenBank:WP_036934346.1;Name=WP_036934346.1;Ontology_term=GO:0006414,GO:0003746,GO:0005737;gbkey=CDS;gene=efp;go_component=cytoplasm|0005737||IEA;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004871142.1;locus_tag=L2557_RS13430;product=elongation factor P;protein_id=WP_036934346.1;transl_table=11 ##sequence-region NZ_JAIKUA010000206.1 1 2112 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000206.1 RefSeq region 1 2112 . + . ID=NZ_JAIKUA010000206.1:1..2112;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000206.1 RefSeq gene 42 1631 . - . ID=gene-L2557_RS13435;Name=prfC;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=L2557_RS13435 NZ_JAIKUA010000206.1 Protein Homology CDS 42 1631 . - 0 ID=cds-WP_075672702.1;Parent=gene-L2557_RS13435;Dbxref=GenBank:WP_075672702.1;Name=WP_075672702.1;Ontology_term=GO:0006415,GO:0003747,GO:0003924,GO:0005525;gbkey=CDS;gene=prfC;go_function=translation release factor activity|0003747||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008925708.1;locus_tag=L2557_RS13435;product=peptide chain release factor 3;protein_id=WP_075672702.1;transl_table=11 ##sequence-region NZ_JAIKUA010000207.1 1 20927 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000207.1 RefSeq region 1 20927 . + . ID=NZ_JAIKUA010000207.1:1..20927;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000207.1 RefSeq gene 395 910 . + . ID=gene-L2557_RS13440;Name=L2557_RS13440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13440 NZ_JAIKUA010000207.1 Protein Homology CDS 395 910 . + 0 ID=cds-WP_159363476.1;Parent=gene-L2557_RS13440;Dbxref=GenBank:WP_159363476.1;Name=WP_159363476.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248516.1;locus_tag=L2557_RS13440;product=bactofilin family protein;protein_id=WP_159363476.1;transl_table=11 NZ_JAIKUA010000207.1 RefSeq gene 992 1549 . + . ID=gene-L2557_RS13445;Name=L2557_RS13445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13445 NZ_JAIKUA010000207.1 Protein Homology CDS 992 1549 . + 0 ID=cds-WP_075670894.1;Parent=gene-L2557_RS13445;Dbxref=GenBank:WP_075670894.1;Name=WP_075670894.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533653.1;locus_tag=L2557_RS13445;product=GNAT family N-acetyltransferase;protein_id=WP_075670894.1;transl_table=11 NZ_JAIKUA010000207.1 RefSeq gene 1527 1877 . - . ID=gene-L2557_RS13450;Name=L2557_RS13450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13450 NZ_JAIKUA010000207.1 Protein Homology CDS 1527 1877 . - 0 ID=cds-WP_075670896.1;Parent=gene-L2557_RS13450;Dbxref=GenBank:WP_075670896.1;Name=WP_075670896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261780.1;locus_tag=L2557_RS13450;product=nitrous oxide-stimulated promoter family protein;protein_id=WP_075670896.1;transl_table=11 NZ_JAIKUA010000207.1 RefSeq gene 2057 2302 . + . ID=gene-L2557_RS13455;Name=L2557_RS13455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13455 NZ_JAIKUA010000207.1 Protein Homology CDS 2057 2302 . + 0 ID=cds-WP_036934877.1;Parent=gene-L2557_RS13455;Dbxref=GenBank:WP_036934877.1;Name=WP_036934877.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368173.1;locus_tag=L2557_RS13455;product=DinI-like family protein;protein_id=WP_036934877.1;transl_table=11 NZ_JAIKUA010000207.1 RefSeq gene 2435 2674 . - . ID=gene-L2557_RS13460;Name=L2557_RS13460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13460 NZ_JAIKUA010000207.1 Protein Homology CDS 2435 2674 . - 0 ID=cds-WP_023581559.1;Parent=gene-L2557_RS13460;Dbxref=GenBank:WP_023581559.1;Name=WP_023581559.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002911532.1;locus_tag=L2557_RS13460;product=YecH family metal-binding protein;protein_id=WP_023581559.1;transl_table=11 NZ_JAIKUA010000207.1 RefSeq gene 2786 3001 . - . ID=gene-L2557_RS13465;Name=L2557_RS13465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13465 NZ_JAIKUA010000207.1 Protein Homology CDS 2786 3001 . - 0 ID=cds-WP_006533649.1;Parent=gene-L2557_RS13465;Dbxref=GenBank:WP_006533649.1;Name=WP_006533649.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243991.1;locus_tag=L2557_RS13465;product=DUF465 domain-containing protein;protein_id=WP_006533649.1;transl_table=11 NZ_JAIKUA010000207.1 RefSeq gene 3266 3745 . + . ID=gene-L2557_RS13470;Name=eco;gbkey=Gene;gene=eco;gene_biotype=protein_coding;locus_tag=L2557_RS13470 NZ_JAIKUA010000207.1 Protein Homology CDS 3266 3745 . + 0 ID=cds-WP_036912483.1;Parent=gene-L2557_RS13470;Dbxref=GenBank:WP_036912483.1;Name=WP_036912483.1;Ontology_term=GO:0004867;gbkey=CDS;gene=eco;go_function=serine-type endopeptidase inhibitor activity|0004867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248511.1;locus_tag=L2557_RS13470;product=serine protease inhibitor ecotin;protein_id=WP_036912483.1;transl_table=11 NZ_JAIKUA010000207.1 RefSeq gene 3834 4271 . - . ID=gene-L2557_RS13475;Name=L2557_RS13475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13475 NZ_JAIKUA010000207.1 Protein Homology CDS 3834 4271 . - 0 ID=cds-WP_036934874.1;Parent=gene-L2557_RS13475;Dbxref=GenBank:WP_036934874.1;Name=WP_036934874.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248510.1;locus_tag=L2557_RS13475;product=universal stress protein;protein_id=WP_036934874.1;transl_table=11 NZ_JAIKUA010000207.1 RefSeq gene 4808 5722 . + . ID=gene-L2557_RS13480;Name=L2557_RS13480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13480 NZ_JAIKUA010000207.1 Protein Homology CDS 4808 5722 . + 0 ID=cds-WP_075670950.1;Parent=gene-L2557_RS13480;Dbxref=GenBank:WP_075670950.1;Name=WP_075670950.1;Ontology_term=GO:0006812,GO:0055085,GO:0008324,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=monoatomic cation transport|0006812||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243988.1;locus_tag=L2557_RS13480;product=cation diffusion facilitator family transporter;protein_id=WP_075670950.1;transl_table=11 NZ_JAIKUA010000207.1 RefSeq gene 5805 6764 . - . ID=gene-L2557_RS13485;Name=ghrB;gbkey=Gene;gene=ghrB;gene_biotype=protein_coding;locus_tag=L2557_RS13485 NZ_JAIKUA010000207.1 Protein Homology CDS 5805 6764 . - 0 ID=cds-WP_099659338.1;Parent=gene-L2557_RS13485;Dbxref=GenBank:WP_099659338.1;Name=WP_099659338.1;Ontology_term=GO:0016616,GO:0051287;gbkey=CDS;gene=ghrB;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827165.1;locus_tag=L2557_RS13485;product=glyoxylate/hydroxypyruvate reductase GhrB;protein_id=WP_099659338.1;transl_table=11 NZ_JAIKUA010000207.1 RefSeq gene 7322 8338 . + . ID=gene-L2557_RS13490;Name=galE;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=L2557_RS13490 NZ_JAIKUA010000207.1 Protein Homology CDS 7322 8338 . + 0 ID=cds-WP_075670902.1;Parent=gene-L2557_RS13490;Dbxref=GenBank:WP_075670902.1;Name=WP_075670902.1;Ontology_term=GO:0006012,GO:0003978;gbkey=CDS;gene=galE;go_function=UDP-glucose 4-epimerase activity|0003978||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248507.1;locus_tag=L2557_RS13490;product=UDP-glucose 4-epimerase GalE;protein_id=WP_075670902.1;transl_table=11 NZ_JAIKUA010000207.1 RefSeq gene 8384 9439 . + . ID=gene-L2557_RS13495;Name=L2557_RS13495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13495 NZ_JAIKUA010000207.1 Protein Homology CDS 8384 9439 . + 0 ID=cds-WP_235410130.1;Parent=gene-L2557_RS13495;Dbxref=GenBank:WP_235410130.1;Name=WP_235410130.1;Ontology_term=GO:0006012,GO:0008108;gbkey=CDS;go_function=UDP-glucose:hexose-1-phosphate uridylyltransferase activity|0008108||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004261685.1;locus_tag=L2557_RS13495;product=UDP-glucose--hexose-1-phosphate uridylyltransferase;protein_id=WP_235410130.1;transl_table=11 NZ_JAIKUA010000207.1 RefSeq gene 9572 10732 . + . ID=gene-L2557_RS13500;Name=galK;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=L2557_RS13500 NZ_JAIKUA010000207.1 Protein Homology CDS 9572 10732 . + 0 ID=cds-WP_235410131.1;Parent=gene-L2557_RS13500;Dbxref=GenBank:WP_235410131.1;Name=WP_235410131.1;Ontology_term=GO:0006012,GO:0046835,GO:0004335,GO:0005524;gbkey=CDS;gene=galK;go_function=galactokinase activity|0004335||IEA,ATP binding|0005524||IEA;go_process=galactose metabolic process|0006012||IEA,carbohydrate phosphorylation|0046835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533639.1;locus_tag=L2557_RS13500;product=galactokinase;protein_id=WP_235410131.1;transl_table=11 NZ_JAIKUA010000207.1 RefSeq gene 10732 11802 . + . ID=gene-L2557_RS13505;Name=galM;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=L2557_RS13505 NZ_JAIKUA010000207.1 Protein Homology CDS 10732 11802 . + 0 ID=cds-WP_099659341.1;Parent=gene-L2557_RS13505;Dbxref=GenBank:WP_099659341.1;Name=WP_099659341.1;Ontology_term=GO:0006012,GO:0004034;gbkey=CDS;gene=galM;go_function=aldose 1-epimerase activity|0004034||IEA;go_process=galactose metabolic process|0006012||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248505.1;locus_tag=L2557_RS13505;product=galactose-1-epimerase;protein_id=WP_099659341.1;transl_table=11 NZ_JAIKUA010000207.1 RefSeq gene 11984 12994 . + . ID=gene-L2557_RS13510;Name=L2557_RS13510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13510 NZ_JAIKUA010000207.1 Protein Homology CDS 11984 12994 . + 0 ID=cds-WP_075670910.1;Parent=gene-L2557_RS13510;Dbxref=GenBank:WP_075670910.1;Name=WP_075670910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017627945.1;locus_tag=L2557_RS13510;product=substrate-binding domain-containing protein;protein_id=WP_075670910.1;transl_table=11 NZ_JAIKUA010000207.1 RefSeq gene 13325 14959 . + . ID=gene-L2557_RS13515;Name=L2557_RS13515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13515 NZ_JAIKUA010000207.1 Protein Homology CDS 13325 14959 . + 0 ID=cds-WP_075670912.1;Parent=gene-L2557_RS13515;Dbxref=GenBank:WP_075670912.1;Name=WP_075670912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243978.1;locus_tag=L2557_RS13515;product=sodium/sugar symporter;protein_id=WP_075670912.1;transl_table=11 NZ_JAIKUA010000207.1 RefSeq gene 15217 17256 . + . ID=gene-L2557_RS13520;Name=L2557_RS13520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13520 NZ_JAIKUA010000207.1 Protein Homology CDS 15217 17256 . + 0 ID=cds-WP_235410132.1;Parent=gene-L2557_RS13520;Dbxref=GenBank:WP_235410132.1;Name=WP_235410132.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243977.1;locus_tag=L2557_RS13520;product=IreA family TonB-dependent siderophore receptor;protein_id=WP_235410132.1;transl_table=11 NZ_JAIKUA010000207.1 RefSeq gene 17371 18228 . + . ID=gene-L2557_RS13525;Name=L2557_RS13525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13525 NZ_JAIKUA010000207.1 Protein Homology CDS 17371 18228 . + 0 ID=cds-WP_075670916.1;Parent=gene-L2557_RS13525;Dbxref=GenBank:WP_075670916.1;Name=WP_075670916.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368168.1;locus_tag=L2557_RS13525;product=alpha/beta hydrolase;protein_id=WP_075670916.1;transl_table=11 NZ_JAIKUA010000207.1 RefSeq gene 18628 19794 . + . ID=gene-L2557_RS13530;Name=L2557_RS13530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13530 NZ_JAIKUA010000207.1 Protein Homology CDS 18628 19794 . + 0 ID=cds-WP_075670918.1;Parent=gene-L2557_RS13530;Dbxref=GenBank:WP_075670918.1;Name=WP_075670918.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368167.1;locus_tag=L2557_RS13530;product=MFS transporter;protein_id=WP_075670918.1;transl_table=11 NZ_JAIKUA010000207.1 RefSeq gene 20010 20588 . + . ID=gene-L2557_RS13535;Name=L2557_RS13535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13535 NZ_JAIKUA010000207.1 Protein Homology CDS 20010 20588 . + 0 ID=cds-WP_075670922.1;Parent=gene-L2557_RS13535;Dbxref=GenBank:WP_075670922.1;Name=WP_075670922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000868777.1;locus_tag=L2557_RS13535;product=DUF1287 domain-containing protein;protein_id=WP_075670922.1;transl_table=11 ##sequence-region NZ_JAIKUA010000208.1 1 15144 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000208.1 RefSeq region 1 15144 . + . ID=NZ_JAIKUA010000208.1:1..15144;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000208.1 RefSeq gene 166 438 . - . ID=gene-L2557_RS13540;Name=L2557_RS13540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13540 NZ_JAIKUA010000208.1 Protein Homology CDS 166 438 . - 0 ID=cds-WP_006533359.1;Parent=gene-L2557_RS13540;Dbxref=GenBank:WP_006533359.1;Name=WP_006533359.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243748.1;locus_tag=L2557_RS13540;product=YfcL family protein;protein_id=WP_006533359.1;transl_table=11 NZ_JAIKUA010000208.1 RefSeq gene 591 1145 . - . ID=gene-L2557_RS13545;Name=L2557_RS13545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13545 NZ_JAIKUA010000208.1 Protein Homology CDS 591 1145 . - 0 ID=cds-WP_088495095.1;Parent=gene-L2557_RS13545;Dbxref=GenBank:WP_088495095.1;Name=WP_088495095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250676.1;locus_tag=L2557_RS13545;product=elongation factor P hydroxylase;protein_id=WP_088495095.1;transl_table=11 NZ_JAIKUA010000208.1 RefSeq gene 1163 1963 . - . ID=gene-L2557_RS13550;Name=L2557_RS13550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13550 NZ_JAIKUA010000208.1 Protein Homology CDS 1163 1963 . - 0 ID=cds-WP_099659393.1;Parent=gene-L2557_RS13550;Dbxref=GenBank:WP_099659393.1;Name=WP_099659393.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250674.1;locus_tag=L2557_RS13550;product=sulfite exporter TauE/SafE family protein;protein_id=WP_099659393.1;transl_table=11 NZ_JAIKUA010000208.1 RefSeq gene 2131 3216 . - . ID=gene-L2557_RS13555;Name=aroC;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=L2557_RS13555 NZ_JAIKUA010000208.1 Protein Homology CDS 2131 3216 . - 0 ID=cds-WP_075670574.1;Parent=gene-L2557_RS13555;Dbxref=GenBank:WP_075670574.1;Name=WP_075670574.1;Ontology_term=GO:0009073,GO:0004107;gbkey=CDS;gene=aroC;go_function=chorismate synthase activity|0004107||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209711.1;locus_tag=L2557_RS13555;product=chorismate synthase;protein_id=WP_075670574.1;transl_table=11 NZ_JAIKUA010000208.1 RefSeq gene 3301 4233 . - . ID=gene-L2557_RS13560;Name=prmB;gbkey=Gene;gene=prmB;gene_biotype=protein_coding;locus_tag=L2557_RS13560 NZ_JAIKUA010000208.1 Protein Homology CDS 3301 4233 . - 0 ID=cds-WP_075670572.1;Parent=gene-L2557_RS13560;Dbxref=GenBank:WP_075670572.1;Name=WP_075670572.1;Ontology_term=GO:0018364,GO:0042273,GO:0008276,GO:0008757;gbkey=CDS;gene=prmB;go_function=protein methyltransferase activity|0008276||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=peptidyl-glutamine methylation|0018364||IEA,ribosomal large subunit biogenesis|0042273||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461327.1;locus_tag=L2557_RS13560;product=50S ribosomal protein L3 N(5)-glutamine methyltransferase;protein_id=WP_075670572.1;transl_table=11 NZ_JAIKUA010000208.1 RefSeq gene 4824 5366 . + . ID=gene-L2557_RS13565;Name=smrB;gbkey=Gene;gene=smrB;gene_biotype=protein_coding;locus_tag=L2557_RS13565 NZ_JAIKUA010000208.1 Protein Homology CDS 4824 5366 . + 0 ID=cds-WP_075670570.1;Parent=gene-L2557_RS13565;Dbxref=GenBank:WP_075670570.1;Name=WP_075670570.1;gbkey=CDS;gene=smrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243759.1;locus_tag=L2557_RS13565;product=endonuclease SmrB;protein_id=WP_075670570.1;transl_table=11 NZ_JAIKUA010000208.1 RefSeq gene 5456 5929 . - . ID=gene-L2557_RS13570;Name=sixA;gbkey=Gene;gene=sixA;gene_biotype=protein_coding;locus_tag=L2557_RS13570 NZ_JAIKUA010000208.1 Protein Homology CDS 5456 5929 . - 0 ID=cds-WP_075670568.1;Parent=gene-L2557_RS13570;Dbxref=GenBank:WP_075670568.1;Name=WP_075670568.1;Ontology_term=GO:0036211,GO:0101006,GO:0005737;gbkey=CDS;gene=sixA;go_component=cytoplasm|0005737||IEA;go_function=protein histidine phosphatase activity|0101006||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533371.1;locus_tag=L2557_RS13570;product=phosphohistidine phosphatase SixA;protein_id=WP_075670568.1;transl_table=11 NZ_JAIKUA010000208.1 RefSeq gene 6318 8474 . - . ID=gene-L2557_RS13575;Name=fadJ;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=L2557_RS13575 NZ_JAIKUA010000208.1 Protein Homology CDS 6318 8474 . - 0 ID=cds-WP_075670564.1;Parent=gene-L2557_RS13575;Dbxref=GenBank:WP_075670564.1;Name=WP_075670564.1;Ontology_term=GO:0006635,GO:0003857,GO:0008692,GO:0016491,GO:0051287;gbkey=CDS;gene=fadJ;go_function=(3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity|0003857||IEA,3-hydroxybutyryl-CoA epimerase activity|0008692||IEA,oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=fatty acid beta-oxidation|0006635||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005183442.1;locus_tag=L2557_RS13575;product=fatty acid oxidation complex subunit alpha FadJ;protein_id=WP_075670564.1;transl_table=11 NZ_JAIKUA010000208.1 RefSeq gene 8474 9778 . - . ID=gene-L2557_RS13580;Name=fadI;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=L2557_RS13580 NZ_JAIKUA010000208.1 Protein Homology CDS 8474 9778 . - 0 ID=cds-WP_075670562.1;Parent=gene-L2557_RS13580;Dbxref=GenBank:WP_075670562.1;Name=WP_075670562.1;gbkey=CDS;gene=fadI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533377.1;locus_tag=L2557_RS13580;product=acetyl-CoA C-acyltransferase FadI;protein_id=WP_075670562.1;transl_table=11 NZ_JAIKUA010000208.1 RefSeq gene 10013 10309 . - . ID=gene-L2557_RS13585;Name=L2557_RS13585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13585 NZ_JAIKUA010000208.1 Protein Homology CDS 10013 10309 . - 0 ID=cds-WP_075670560.1;Parent=gene-L2557_RS13585;Dbxref=GenBank:WP_075670560.1;Name=WP_075670560.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243769.1;locus_tag=L2557_RS13585;product=YfcZ/YiiS family protein;protein_id=WP_075670560.1;transl_table=11 NZ_JAIKUA010000208.1 RefSeq gene 10655 12016 . + . ID=gene-L2557_RS13590;Name=fadL;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=L2557_RS13590 NZ_JAIKUA010000208.1 Protein Homology CDS 10655 12016 . + 0 ID=cds-WP_075670558.1;Parent=gene-L2557_RS13590;Dbxref=GenBank:WP_075670558.1;Name=WP_075670558.1;gbkey=CDS;gene=fadL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017627979.1;locus_tag=L2557_RS13590;product=long-chain fatty acid transporter FadL;protein_id=WP_075670558.1;transl_table=11 NZ_JAIKUA010000208.1 RefSeq gene 12100 12840 . - . ID=gene-L2557_RS13595;Name=mlaA;gbkey=Gene;gene=mlaA;gene_biotype=protein_coding;locus_tag=L2557_RS13595 NZ_JAIKUA010000208.1 Protein Homology CDS 12100 12840 . - 0 ID=cds-WP_075670556.1;Parent=gene-L2557_RS13595;Dbxref=GenBank:WP_075670556.1;Name=WP_075670556.1;Ontology_term=GO:0016020;gbkey=CDS;gene=mlaA;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248410.1;locus_tag=L2557_RS13595;product=phospholipid-binding lipoprotein MlaA;protein_id=WP_075670556.1;transl_table=11 NZ_JAIKUA010000208.1 RefSeq gene 13048 13944 . - . ID=gene-L2557_RS13600;Name=L2557_RS13600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13600 NZ_JAIKUA010000208.1 Protein Homology CDS 13048 13944 . - 0 ID=cds-WP_223673549.1;Parent=gene-L2557_RS13600;Dbxref=GenBank:WP_223673549.1;Name=WP_223673549.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025052.6;locus_tag=L2557_RS13600;product=AAA family ATPase;protein_id=WP_223673549.1;transl_table=11 NZ_JAIKUA010000208.1 RefSeq gene 14241 14423 . - . ID=gene-L2557_RS13605;Name=L2557_RS13605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13605 NZ_JAIKUA010000208.1 Protein Homology CDS 14241 14423 . - 0 ID=cds-WP_099659389.1;Parent=gene-L2557_RS13605;Dbxref=GenBank:WP_099659389.1;Name=WP_099659389.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660686.1;locus_tag=L2557_RS13605;product=GDCCVxC domain-containing (seleno)protein;protein_id=WP_099659389.1;transl_table=11 NZ_JAIKUA010000208.1 RefSeq gene 14515 15090 . - . ID=gene-L2557_RS13610;Name=L2557_RS13610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13610 NZ_JAIKUA010000208.1 Protein Homology CDS 14515 15090 . - 0 ID=cds-WP_099659388.1;Parent=gene-L2557_RS13610;Dbxref=GenBank:WP_099659388.1;Name=WP_099659388.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015142.6;locus_tag=L2557_RS13610;product=fused DSP-PTPase phosphatase/NAD kinase-like protein;protein_id=WP_099659388.1;transl_table=11 ##sequence-region NZ_JAIKUA010000209.1 1 254 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000209.1 RefSeq region 1 254 . + . ID=NZ_JAIKUA010000209.1:1..254;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000209.1 RefSeq gene 123 198 . - . ID=gene-L2557_RS13615;Name=L2557_RS13615;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS13615 NZ_JAIKUA010000209.1 tRNAscan-SE tRNA 123 198 . - . ID=rna-L2557_RS13615;Parent=gene-L2557_RS13615;anticodon=(pos:complement(162..164));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS13615;product=tRNA-Glu NZ_JAIKUA010000209.1 tRNAscan-SE exon 123 198 . - . ID=exon-L2557_RS13615-1;Parent=rna-L2557_RS13615;anticodon=(pos:complement(162..164));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS13615;product=tRNA-Glu ##sequence-region NZ_JAIKUA010000021.1 1 45330 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000021.1 RefSeq region 1 45330 . + . ID=NZ_JAIKUA010000021.1:1..45330;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000021.1 RefSeq gene 55 2238 . + . ID=gene-L2557_RS02235;Name=glgB;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=L2557_RS02235 NZ_JAIKUA010000021.1 Protein Homology CDS 55 2238 . + 0 ID=cds-WP_235409760.1;Parent=gene-L2557_RS02235;Dbxref=GenBank:WP_235409760.1;Name=WP_235409760.1;Ontology_term=GO:0005975,GO:0005978,GO:0003844,GO:0004553,GO:0043169;gbkey=CDS;gene=glgB;go_function=1%2C4-alpha-glucan branching enzyme activity|0003844||IEA,hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,cation binding|0043169||IEA;go_process=carbohydrate metabolic process|0005975||IEA,glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536798.1;locus_tag=L2557_RS02235;product=1%2C4-alpha-glucan branching protein GlgB;protein_id=WP_235409760.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 2240 4309 . + . ID=gene-L2557_RS02240;Name=glgX;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=L2557_RS02240 NZ_JAIKUA010000021.1 Protein Homology CDS 2240 4309 . + 0 ID=cds-WP_235409761.1;Parent=gene-L2557_RS02240;Dbxref=GenBank:WP_235409761.1;Name=WP_235409761.1;Ontology_term=GO:0005980,GO:0120549;gbkey=CDS;gene=glgX;go_function=limit dextrin alpha-1%2C6-maltotetraose-hydrolase activity|0120549||IEA;go_process=glycogen catabolic process|0005980||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005157476.1;locus_tag=L2557_RS02240;product=glycogen debranching protein GlgX;protein_id=WP_235409761.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 4331 5680 . + . ID=gene-L2557_RS02245;Name=glgC;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=L2557_RS02245 NZ_JAIKUA010000021.1 Protein Homology CDS 4331 5680 . + 0 ID=cds-WP_099660408.1;Parent=gene-L2557_RS02245;Dbxref=GenBank:WP_099660408.1;Name=WP_099660408.1;Ontology_term=GO:0005978,GO:0008878;gbkey=CDS;gene=glgC;go_function=glucose-1-phosphate adenylyltransferase activity|0008878||IEA;go_process=glycogen biosynthetic process|0005978||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806989.1;locus_tag=L2557_RS02245;product=glucose-1-phosphate adenylyltransferase;protein_id=WP_099660408.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 5677 7110 . + . ID=gene-L2557_RS02250;Name=glgA;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=L2557_RS02250 NZ_JAIKUA010000021.1 Protein Homology CDS 5677 7110 . + 0 ID=cds-WP_235409762.1;Parent=gene-L2557_RS02250;Dbxref=GenBank:WP_235409762.1;Name=WP_235409762.1;Ontology_term=GO:0004373;gbkey=CDS;gene=glgA;go_function=alpha-1%2C4-glucan glucosyltransferase (UDP-glucose donor) activity|0004373||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005174770.1;locus_tag=L2557_RS02250;product=glycogen synthase GlgA;protein_id=WP_235409762.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 7153 9606 . + . ID=gene-L2557_RS02255;Name=glgP;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=L2557_RS02255 NZ_JAIKUA010000021.1 Protein Homology CDS 7153 9606 . + 0 ID=cds-WP_235409763.1;Parent=gene-L2557_RS02255;Dbxref=GenBank:WP_235409763.1;Name=WP_235409763.1;Ontology_term=GO:0005975,GO:0004645,GO:0030170;gbkey=CDS;gene=glgP;go_function=1%2C4-alpha-oligoglucan phosphorylase activity|0004645||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121612.1;locus_tag=L2557_RS02255;product=glycogen/starch/alpha-glucan family phosphorylase;protein_id=WP_235409763.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 9692 10342 . - . ID=gene-L2557_RS02260;Name=L2557_RS02260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02260 NZ_JAIKUA010000021.1 Protein Homology CDS 9692 10342 . - 0 ID=cds-WP_159242061.1;Parent=gene-L2557_RS02260;Dbxref=GenBank:WP_159242061.1;Name=WP_159242061.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812094.1;locus_tag=L2557_RS02260;product=helix-turn-helix transcriptional regulator;protein_id=WP_159242061.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 10436 11851 . + . ID=gene-L2557_RS02265;Name=L2557_RS02265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02265 NZ_JAIKUA010000021.1 Protein Homology CDS 10436 11851 . + 0 ID=cds-WP_235409764.1;Parent=gene-L2557_RS02265;Dbxref=GenBank:WP_235409764.1;Name=WP_235409764.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004965491.1;locus_tag=L2557_RS02265;product=MFS transporter;protein_id=WP_235409764.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 12058 12834 . + . ID=gene-L2557_RS02270;Name=L2557_RS02270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02270 NZ_JAIKUA010000021.1 Protein Homology CDS 12058 12834 . + 0 ID=cds-WP_235409765.1;Parent=gene-L2557_RS02270;Dbxref=GenBank:WP_235409765.1;Name=WP_235409765.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF053507.1;locus_tag=L2557_RS02270;product=type III secrection system effector%2C WxxxE family;protein_id=WP_235409765.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 12959 13360 . + . ID=gene-L2557_RS02275;Name=L2557_RS02275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02275 NZ_JAIKUA010000021.1 Protein Homology CDS 12959 13360 . + 0 ID=cds-WP_075673094.1;Parent=gene-L2557_RS02275;Dbxref=GenBank:WP_075673094.1;Name=WP_075673094.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248050.1;locus_tag=L2557_RS02275;product=RidA family protein;protein_id=WP_075673094.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq pseudogene 13353 14304 . + . ID=gene-L2557_RS02280;Name=L2557_RS02280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS02280;pseudo=true NZ_JAIKUA010000021.1 Protein Homology CDS 13353 14304 . + 0 ID=cds-L2557_RS02280;Parent=gene-L2557_RS02280;Note=frameshifted;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248049.1;locus_tag=L2557_RS02280;product=threo-3-hydroxy-L-aspartate ammonia-lyase;pseudo=true;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 14426 15337 . - . ID=gene-L2557_RS02285;Name=L2557_RS02285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02285 NZ_JAIKUA010000021.1 Protein Homology CDS 14426 15337 . - 0 ID=cds-WP_075673096.1;Parent=gene-L2557_RS02285;Dbxref=GenBank:WP_075673096.1;Name=WP_075673096.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827725.1;locus_tag=L2557_RS02285;product=dihydrodipicolinate synthase family protein;protein_id=WP_075673096.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 15356 15961 . - . ID=gene-L2557_RS02290;Name=L2557_RS02290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02290 NZ_JAIKUA010000021.1 Protein Homology CDS 15356 15961 . - 0 ID=cds-WP_235409766.1;Parent=gene-L2557_RS02290;Dbxref=GenBank:WP_235409766.1;Name=WP_235409766.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536785.1;locus_tag=L2557_RS02290;product=dihydroxyacetone kinase subunit L;protein_id=WP_235409766.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 15964 16959 . - . ID=gene-L2557_RS02295;Name=L2557_RS02295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02295 NZ_JAIKUA010000021.1 Protein Homology CDS 15964 16959 . - 0 ID=cds-WP_235409768.1;Parent=gene-L2557_RS02295;Dbxref=GenBank:WP_235409768.1;Name=WP_235409768.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628117.1;locus_tag=L2557_RS02295;product=dihydroxyacetone kinase subunit DhaK;protein_id=WP_235409768.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 17107 18597 . - . ID=gene-L2557_RS02300;Name=L2557_RS02300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02300 NZ_JAIKUA010000021.1 Protein Homology CDS 17107 18597 . - 0 ID=cds-WP_075673099.1;Parent=gene-L2557_RS02300;Dbxref=GenBank:WP_075673099.1;Name=WP_075673099.1;Ontology_term=GO:0006810,GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248045.1;locus_tag=L2557_RS02300;product=tripartite tricarboxylate transporter permease;protein_id=WP_075673099.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 18613 19050 . - . ID=gene-L2557_RS02305;Name=L2557_RS02305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02305 NZ_JAIKUA010000021.1 Protein Homology CDS 18613 19050 . - 0 ID=cds-WP_075673100.1;Parent=gene-L2557_RS02305;Dbxref=GenBank:WP_075673100.1;Name=WP_075673100.1;Ontology_term=GO:0005215;gbkey=CDS;go_function=transporter activity|0005215||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536779.1;locus_tag=L2557_RS02305;product=tripartite tricarboxylate transporter TctB family protein;protein_id=WP_075673100.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 19082 20026 . - . ID=gene-L2557_RS02310;Name=L2557_RS02310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02310 NZ_JAIKUA010000021.1 Protein Homology CDS 19082 20026 . - 0 ID=cds-WP_075673101.1;Parent=gene-L2557_RS02310;Dbxref=GenBank:WP_075673101.1;Name=WP_075673101.1;Ontology_term=GO:0042597;gbkey=CDS;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242895.1;locus_tag=L2557_RS02310;product=tripartite tricarboxylate transporter substrate binding protein;protein_id=WP_075673101.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 20026 21270 . - . ID=gene-L2557_RS02315;Name=L2557_RS02315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02315 NZ_JAIKUA010000021.1 Protein Homology CDS 20026 21270 . - 0 ID=cds-WP_075673102.1;Parent=gene-L2557_RS02315;Dbxref=GenBank:WP_075673102.1;Name=WP_075673102.1;Ontology_term=GO:0005524,GO:0019200;gbkey=CDS;go_function=ATP binding|0005524||IEA,carbohydrate kinase activity|0019200||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242894.1;locus_tag=L2557_RS02315;product=PfkB family carbohydrate kinase;protein_id=WP_075673102.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 21584 21898 . - . ID=gene-L2557_RS02320;Name=L2557_RS02320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02320 NZ_JAIKUA010000021.1 Protein Homology CDS 21584 21898 . - 0 ID=cds-WP_075673103.1;Parent=gene-L2557_RS02320;Dbxref=GenBank:WP_075673103.1;Name=WP_075673103.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536773.1;locus_tag=L2557_RS02320;product=AzlD domain-containing protein;protein_id=WP_075673103.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 21895 22608 . - . ID=gene-L2557_RS02325;Name=L2557_RS02325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02325 NZ_JAIKUA010000021.1 Protein Homology CDS 21895 22608 . - 0 ID=cds-WP_075673104.1;Parent=gene-L2557_RS02325;Dbxref=GenBank:WP_075673104.1;Name=WP_075673104.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661771.1;locus_tag=L2557_RS02325;product=AzlC family ABC transporter permease;protein_id=WP_075673104.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 22739 23593 . - . ID=gene-L2557_RS02330;Name=L2557_RS02330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02330 NZ_JAIKUA010000021.1 Protein Homology CDS 22739 23593 . - 0 ID=cds-WP_075673105.1;Parent=gene-L2557_RS02330;Dbxref=GenBank:WP_075673105.1;Name=WP_075673105.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004965488.1;locus_tag=L2557_RS02330;product=AraC family transcriptional regulator;protein_id=WP_075673105.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 23676 24686 . - . ID=gene-L2557_RS02335;Name=L2557_RS02335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02335 NZ_JAIKUA010000021.1 Protein Homology CDS 23676 24686 . - 0 ID=cds-WP_075673106.1;Parent=gene-L2557_RS02335;Dbxref=GenBank:WP_075673106.1;Name=WP_075673106.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017414.1;locus_tag=L2557_RS02335;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_075673106.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 24750 26156 . - . ID=gene-L2557_RS02340;Name=L2557_RS02340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02340 NZ_JAIKUA010000021.1 Protein Homology CDS 24750 26156 . - 0 ID=cds-WP_075673107.1;Parent=gene-L2557_RS02340;Dbxref=GenBank:WP_075673107.1;Name=WP_075673107.1;Ontology_term=GO:0005975,GO:0004564,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=beta-fructofuranosidase activity|0004564||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012017413.1;locus_tag=L2557_RS02340;product=sucrose-6-phosphate hydrolase;protein_id=WP_075673107.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 26157 27527 . - . ID=gene-L2557_RS02345;Name=L2557_RS02345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02345 NZ_JAIKUA010000021.1 Protein Homology CDS 26157 27527 . - 0 ID=cds-WP_075673122.1;Parent=gene-L2557_RS02345;Dbxref=GenBank:WP_075673122.1;Name=WP_075673122.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225625.1;locus_tag=L2557_RS02345;product=sucrose-specific PTS transporter subunit IIBC;protein_id=WP_075673122.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 28193 30631 . + . ID=gene-L2557_RS02350;Name=dmsA;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=L2557_RS02350 NZ_JAIKUA010000021.1 Protein Homology CDS 28193 30631 . + 0 ID=cds-WP_223673628.1;Parent=gene-L2557_RS02350;Dbxref=GenBank:WP_223673628.1;Name=WP_223673628.1;Ontology_term=GO:0009389,GO:0030151;gbkey=CDS;gene=dmsA;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657403.1;locus_tag=L2557_RS02350;product=dimethylsulfoxide reductase subunit A;protein_id=WP_223673628.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 30643 31260 . + . ID=gene-L2557_RS02355;Name=L2557_RS02355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02355 NZ_JAIKUA010000021.1 Protein Homology CDS 30643 31260 . + 0 ID=cds-WP_023582154.1;Parent=gene-L2557_RS02355;Dbxref=GenBank:WP_023582154.1;Name=WP_023582154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309007.1;locus_tag=L2557_RS02355;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_023582154.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 31262 32119 . + . ID=gene-L2557_RS02360;Name=L2557_RS02360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02360 NZ_JAIKUA010000021.1 Protein Homology CDS 31262 32119 . + 0 ID=cds-WP_099660397.1;Parent=gene-L2557_RS02360;Dbxref=GenBank:WP_099660397.1;Name=WP_099660397.1;Ontology_term=GO:0019645,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=anaerobic electron transport chain|0019645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536762.1;locus_tag=L2557_RS02360;product=DmsC/YnfH family molybdoenzyme membrane anchor subunit;protein_id=WP_099660397.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 32294 32905 . + . ID=gene-L2557_RS02365;Name=dmsD;gbkey=Gene;gene=dmsD;gene_biotype=protein_coding;locus_tag=L2557_RS02365 NZ_JAIKUA010000021.1 Protein Homology CDS 32294 32905 . + 0 ID=cds-WP_075673110.1;Parent=gene-L2557_RS02365;Dbxref=GenBank:WP_075673110.1;Name=WP_075673110.1;gbkey=CDS;gene=dmsD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827802.1;locus_tag=L2557_RS02365;product=Tat proofreading chaperone DmsD;protein_id=WP_075673110.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 32991 33452 . - . ID=gene-L2557_RS02370;Name=L2557_RS02370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02370 NZ_JAIKUA010000021.1 Protein Homology CDS 32991 33452 . - 0 ID=cds-WP_099660396.1;Parent=gene-L2557_RS02370;Dbxref=GenBank:WP_099660396.1;Name=WP_099660396.1;Ontology_term=GO:0009116,GO:0008270,GO:0019239;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,deaminase activity|0019239||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242888.1;locus_tag=L2557_RS02370;product=nucleoside deaminase;protein_id=WP_099660396.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 33452 34138 . - . ID=gene-L2557_RS02375;Name=L2557_RS02375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02375 NZ_JAIKUA010000021.1 Protein Homology CDS 33452 34138 . - 0 ID=cds-WP_075673112.1;Parent=gene-L2557_RS02375;Dbxref=GenBank:WP_075673112.1;Name=WP_075673112.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827803.1;locus_tag=L2557_RS02375;product=ankyrin repeat domain-containing protein;protein_id=WP_075673112.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 34367 34450 . + . ID=gene-L2557_RS17955;Name=L2557_RS17955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17955 NZ_JAIKUA010000021.1 Protein Homology CDS 34367 34450 . + 0 ID=cds-WP_099660395.1;Parent=gene-L2557_RS17955;Dbxref=GenBank:WP_099660395.1;Name=WP_099660395.1;Ontology_term=GO:0043462,GO:0008556,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=regulation of ATP-dependent activity|0043462||IEA;inference=COORDINATES: protein motif:HMM:NF021144.6;locus_tag=L2557_RS17955;product=potassium-transporting ATPase subunit F;protein_id=WP_099660395.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 34453 36156 . + . ID=gene-L2557_RS02380;Name=kdpA;gbkey=Gene;gene=kdpA;gene_biotype=protein_coding;locus_tag=L2557_RS02380 NZ_JAIKUA010000021.1 Protein Homology CDS 34453 36156 . + 0 ID=cds-WP_075673113.1;Parent=gene-L2557_RS02380;Dbxref=GenBank:WP_075673113.1;Name=WP_075673113.1;Ontology_term=GO:0006813,GO:0008556,GO:0031004;gbkey=CDS;gene=kdpA;go_component=potassium ion-transporting ATPase complex|0031004||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242886.1;locus_tag=L2557_RS02380;product=potassium-transporting ATPase subunit KdpA;protein_id=WP_075673113.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 36168 38225 . + . ID=gene-L2557_RS02385;Name=kdpB;gbkey=Gene;gene=kdpB;gene_biotype=protein_coding;locus_tag=L2557_RS02385 NZ_JAIKUA010000021.1 Protein Homology CDS 36168 38225 . + 0 ID=cds-WP_075673114.1;Parent=gene-L2557_RS02385;Dbxref=GenBank:WP_075673114.1;Name=WP_075673114.1;Ontology_term=GO:0006813,GO:0005524,GO:0008556,GO:0016020,GO:0031004;gbkey=CDS;gene=kdpB;go_component=membrane|0016020||IEA,potassium ion-transporting ATPase complex|0031004||IEA;go_function=ATP binding|0005524||IEA,P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628120.1;locus_tag=L2557_RS02385;product=potassium-transporting ATPase subunit KdpB;protein_id=WP_075673114.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 38236 38832 . + . ID=gene-L2557_RS02390;Name=kdpC;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=L2557_RS02390 NZ_JAIKUA010000021.1 Protein Homology CDS 38236 38832 . + 0 ID=cds-WP_099660394.1;Parent=gene-L2557_RS02390;Dbxref=GenBank:WP_099660394.1;Name=WP_099660394.1;Ontology_term=GO:0006813,GO:0008556,GO:0016020;gbkey=CDS;gene=kdpC;go_component=membrane|0016020||IEA;go_function=P-type potassium transmembrane transporter activity|0008556||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912089.1;locus_tag=L2557_RS02390;product=potassium-transporting ATPase subunit KdpC;protein_id=WP_099660394.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 38834 41554 . + . ID=gene-L2557_RS02395;Name=kdpD;gbkey=Gene;gene=kdpD;gene_biotype=protein_coding;locus_tag=L2557_RS02395 NZ_JAIKUA010000021.1 Protein Homology CDS 38834 41554 . + 0 ID=cds-WP_235409770.1;Parent=gene-L2557_RS02395;Dbxref=GenBank:WP_235409770.1;Name=WP_235409770.1;Ontology_term=GO:0000160,GO:0000155;gbkey=CDS;gene=kdpD;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628121.1;locus_tag=L2557_RS02395;product=two-component system sensor histidine kinase KdpD;protein_id=WP_235409770.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 41551 42234 . + . ID=gene-L2557_RS02400;Name=kdpE;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=L2557_RS02400 NZ_JAIKUA010000021.1 Protein Homology CDS 41551 42234 . + 0 ID=cds-WP_099660392.1;Parent=gene-L2557_RS02400;Dbxref=GenBank:WP_099660392.1;Name=WP_099660392.1;Ontology_term=GO:0000160,GO:0006355,GO:0003677;gbkey=CDS;gene=kdpE;go_function=DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536753.1;locus_tag=L2557_RS02400;product=two-component system response regulator KdpE;protein_id=WP_099660392.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq gene 42278 45025 . - . ID=gene-L2557_RS02405;Name=L2557_RS02405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02405 NZ_JAIKUA010000021.1 GeneMarkS-2+ CDS 42278 45025 . - 0 ID=cds-WP_235409772.1;Parent=gene-L2557_RS02405;Dbxref=GenBank:WP_235409772.1;Name=WP_235409772.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS02405;product=phage tail protein;protein_id=WP_235409772.1;transl_table=11 NZ_JAIKUA010000021.1 RefSeq pseudogene 45012 45330 . - . ID=gene-L2557_RS02410;Name=L2557_RS02410;end_range=45330,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS02410;partial=true;pseudo=true NZ_JAIKUA010000021.1 GeneMarkS-2+ CDS 45012 45330 . - 1 ID=cds-L2557_RS02410;Parent=gene-L2557_RS02410;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=45330,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS02410;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAIKUA010000210.1 1 331 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000210.1 RefSeq region 1 331 . + . ID=NZ_JAIKUA010000210.1:1..331;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000210.1 RefSeq gene 1 311 . - . ID=gene-L2557_RS13620;Name=L2557_RS13620;gbkey=Gene;gene_biotype=rRNA;locus_tag=L2557_RS13620;partial=true;start_range=.,1 NZ_JAIKUA010000210.1 cmsearch rRNA 1 311 . - . ID=rna-L2557_RS13620;Parent=gene-L2557_RS13620;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=L2557_RS13620;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JAIKUA010000210.1 cmsearch exon 1 311 . - . ID=exon-L2557_RS13620-1;Parent=rna-L2557_RS13620;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=L2557_RS13620;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JAIKUA010000211.1 1 1743 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000211.1 RefSeq region 1 1743 . + . ID=NZ_JAIKUA010000211.1:1..1743;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000211.1 RefSeq gene 270 1622 . + . ID=gene-L2557_RS13625;Name=L2557_RS13625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13625 NZ_JAIKUA010000211.1 Protein Homology CDS 270 1622 . + 0 ID=cds-WP_099659789.1;Parent=gene-L2557_RS13625;Dbxref=GenBank:WP_099659789.1;Name=WP_099659789.1;Ontology_term=GO:0006835,GO:0015293;gbkey=CDS;go_function=symporter activity|0015293||IEA;go_process=dicarboxylic acid transport|0006835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004256968.1;locus_tag=L2557_RS13625;product=dicarboxylate/amino acid:cation symporter;protein_id=WP_099659789.1;transl_table=11 ##sequence-region NZ_JAIKUA010000212.1 1 8040 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000212.1 RefSeq region 1 8040 . + . ID=NZ_JAIKUA010000212.1:1..8040;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000212.1 RefSeq gene 1 1851 . - . ID=gene-L2557_RS13630;Name=rsxC;gbkey=Gene;gene=rsxC;gene_biotype=protein_coding;locus_tag=L2557_RS13630;partial=true;start_range=.,1 NZ_JAIKUA010000212.1 Protein Homology CDS 1 1851 . - 0 ID=cds-WP_235410133.1;Parent=gene-L2557_RS13630;Dbxref=GenBank:WP_235410133.1;Name=WP_235410133.1;Ontology_term=GO:0009055,GO:0051539,GO:0016020;gbkey=CDS;gene=rsxC;go_component=membrane|0016020||IEA;go_function=electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845874.1;locus_tag=L2557_RS13630;partial=true;product=electron transport complex subunit RsxC;protein_id=WP_235410133.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000212.1 RefSeq gene 1844 2470 . - . ID=gene-L2557_RS13635;Name=rsxB;gbkey=Gene;gene=rsxB;gene_biotype=protein_coding;locus_tag=L2557_RS13635 NZ_JAIKUA010000212.1 Protein Homology CDS 1844 2470 . - 0 ID=cds-WP_006536931.1;Parent=gene-L2557_RS13635;Dbxref=GenBank:WP_006536931.1;Name=WP_006536931.1;Ontology_term=GO:0022900,GO:0009055,GO:0051536;gbkey=CDS;gene=rsxB;go_function=electron transfer activity|0009055||IEA,iron-sulfur cluster binding|0051536||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243020.1;locus_tag=L2557_RS13635;product=electron transport complex subunit RsxB;protein_id=WP_006536931.1;transl_table=11 NZ_JAIKUA010000212.1 RefSeq gene 2470 3051 . - . ID=gene-L2557_RS13640;Name=rsxA;gbkey=Gene;gene=rsxA;gene_biotype=protein_coding;locus_tag=L2557_RS13640 NZ_JAIKUA010000212.1 Protein Homology CDS 2470 3051 . - 0 ID=cds-WP_006536930.1;Parent=gene-L2557_RS13640;Dbxref=GenBank:WP_006536930.1;Name=WP_006536930.1;Ontology_term=GO:0022900,GO:0016020;gbkey=CDS;gene=rsxA;go_component=membrane|0016020||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017456621.1;locus_tag=L2557_RS13640;product=electron transport complex subunit RsxA;protein_id=WP_006536930.1;transl_table=11 NZ_JAIKUA010000212.1 RefSeq gene 3146 3613 . - . ID=gene-L2557_RS13645;Name=L2557_RS13645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13645 NZ_JAIKUA010000212.1 Protein Homology CDS 3146 3613 . - 0 ID=cds-WP_088495674.1;Parent=gene-L2557_RS13645;Dbxref=GenBank:WP_088495674.1;Name=WP_088495674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243016.1;locus_tag=L2557_RS13645;product=DUF2569 domain-containing protein;protein_id=WP_088495674.1;transl_table=11 NZ_JAIKUA010000212.1 RefSeq gene 3745 4788 . + . ID=gene-L2557_RS13650;Name=L2557_RS13650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13650 NZ_JAIKUA010000212.1 Protein Homology CDS 3745 4788 . + 0 ID=cds-WP_075672049.1;Parent=gene-L2557_RS13650;Dbxref=GenBank:WP_075672049.1;Name=WP_075672049.1;Ontology_term=GO:0000166;gbkey=CDS;go_function=nucleotide binding|0000166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367952.1;locus_tag=L2557_RS13650;product=oxidoreductase;protein_id=WP_075672049.1;transl_table=11 NZ_JAIKUA010000212.1 RefSeq gene 4811 5800 . + . ID=gene-L2557_RS13655;Name=L2557_RS13655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13655 NZ_JAIKUA010000212.1 Protein Homology CDS 4811 5800 . + 0 ID=cds-WP_075672047.1;Parent=gene-L2557_RS13655;Dbxref=GenBank:WP_075672047.1;Name=WP_075672047.1;Ontology_term=GO:0006810,GO:0015293,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536926.1;locus_tag=L2557_RS13655;product=bile acid:sodium symporter family protein;protein_id=WP_075672047.1;transl_table=11 NZ_JAIKUA010000212.1 RefSeq gene 5897 6349 . - . ID=gene-L2557_RS13660;Name=L2557_RS13660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13660 NZ_JAIKUA010000212.1 Protein Homology CDS 5897 6349 . - 0 ID=cds-WP_075672046.1;Parent=gene-L2557_RS13660;Dbxref=GenBank:WP_075672046.1;Name=WP_075672046.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004240072.1;locus_tag=L2557_RS13660;product=hypothetical protein;protein_id=WP_075672046.1;transl_table=11 NZ_JAIKUA010000212.1 RefSeq gene 6483 7484 . - . ID=gene-L2557_RS13665;Name=add;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=L2557_RS13665 NZ_JAIKUA010000212.1 Protein Homology CDS 6483 7484 . - 0 ID=cds-WP_099659701.1;Parent=gene-L2557_RS13665;Dbxref=GenBank:WP_099659701.1;Name=WP_099659701.1;Ontology_term=GO:0009168,GO:0004000;gbkey=CDS;gene=add;go_function=adenosine deaminase activity|0004000||IEA;go_process=purine ribonucleoside monophosphate biosynthetic process|0009168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845868.1;locus_tag=L2557_RS13665;product=adenosine deaminase;protein_id=WP_099659701.1;transl_table=11 ##sequence-region NZ_JAIKUA010000213.1 1 51118 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000213.1 RefSeq region 1 51118 . + . ID=NZ_JAIKUA010000213.1:1..51118;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000213.1 RefSeq gene 381 1451 . - . ID=gene-L2557_RS13670;Name=recA;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=L2557_RS13670 NZ_JAIKUA010000213.1 Protein Homology CDS 381 1451 . - 0 ID=cds-WP_075672409.1;Parent=gene-L2557_RS13670;Dbxref=GenBank:WP_075672409.1;Name=WP_075672409.1;Ontology_term=GO:0006281,GO:0003677,GO:0003697,GO:0005524,GO:0008094;gbkey=CDS;gene=recA;go_function=DNA binding|0003677||IEA,single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA,ATP-dependent activity%2C acting on DNA|0008094||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845369.1;locus_tag=L2557_RS13670;product=recombinase RecA;protein_id=WP_075672409.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 1559 2065 . - . ID=gene-L2557_RS13675;Name=pncC;gbkey=Gene;gene=pncC;gene_biotype=protein_coding;locus_tag=L2557_RS13675 NZ_JAIKUA010000213.1 Protein Homology CDS 1559 2065 . - 0 ID=cds-WP_075672407.1;Parent=gene-L2557_RS13675;Dbxref=GenBank:WP_075672407.1;Name=WP_075672407.1;gbkey=CDS;gene=pncC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628346.1;locus_tag=L2557_RS13675;product=nicotinamide-nucleotide amidase;protein_id=WP_075672407.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 2102 3301 . - . ID=gene-L2557_RS13680;Name=lplT;gbkey=Gene;gene=lplT;gene_biotype=protein_coding;locus_tag=L2557_RS13680 NZ_JAIKUA010000213.1 Protein Homology CDS 2102 3301 . - 0 ID=cds-WP_099659854.1;Parent=gene-L2557_RS13680;Dbxref=GenBank:WP_099659854.1;Name=WP_099659854.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=lplT;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534769.1;locus_tag=L2557_RS13680;product=lysophospholipid transporter LplT;protein_id=WP_099659854.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 3301 5460 . - . ID=gene-L2557_RS13685;Name=aas;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=L2557_RS13685 NZ_JAIKUA010000213.1 Protein Homology CDS 3301 5460 . - 0 ID=cds-WP_083629080.1;Parent=gene-L2557_RS13685;Dbxref=GenBank:WP_083629080.1;Name=WP_083629080.1;Ontology_term=GO:0006631,GO:0008654,GO:0008779,GO:0008922;gbkey=CDS;gene=aas;go_function=acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity|0008779||IEA,long-chain fatty acid [acyl-carrier-protein] ligase activity|0008922||IEA;go_process=fatty acid metabolic process|0006631||IEA,phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247399.1;locus_tag=L2557_RS13685;product=bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase;protein_id=WP_083629080.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 5564 6076 . - . ID=gene-L2557_RS13690;Name=aroL;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=L2557_RS13690 NZ_JAIKUA010000213.1 Protein Homology CDS 5564 6076 . - 0 ID=cds-WP_075672403.1;Parent=gene-L2557_RS13690;Dbxref=GenBank:WP_075672403.1;Name=WP_075672403.1;Ontology_term=GO:0009073,GO:0004765;gbkey=CDS;gene=aroL;go_function=shikimate kinase activity|0004765||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244785.1;locus_tag=L2557_RS13690;product=shikimate kinase AroL;protein_id=WP_075672403.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 6223 7476 . - . ID=gene-L2557_RS13695;Name=L2557_RS13695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13695 NZ_JAIKUA010000213.1 Protein Homology CDS 6223 7476 . - 0 ID=cds-WP_099659855.1;Parent=gene-L2557_RS13695;Dbxref=GenBank:WP_099659855.1;Name=WP_099659855.1;Ontology_term=GO:0055129,GO:0004350,GO:0016620;gbkey=CDS;go_function=glutamate-5-semialdehyde dehydrogenase activity|0004350||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005160530.1;locus_tag=L2557_RS13695;product=glutamate-5-semialdehyde dehydrogenase;protein_id=WP_099659855.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 7488 8591 . - . ID=gene-L2557_RS13700;Name=proB;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=L2557_RS13700 NZ_JAIKUA010000213.1 Protein Homology CDS 7488 8591 . - 0 ID=cds-WP_036911879.1;Parent=gene-L2557_RS13700;Dbxref=GenBank:WP_036911879.1;Name=WP_036911879.1;Ontology_term=GO:0055129,GO:0004349,GO:0005737;gbkey=CDS;gene=proB;go_component=cytoplasm|0005737||IEA;go_function=glutamate 5-kinase activity|0004349||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247396.1;locus_tag=L2557_RS13700;product=glutamate 5-kinase;protein_id=WP_036911879.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 8707 9108 . - . ID=gene-L2557_RS13705;Name=crl;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=L2557_RS13705 NZ_JAIKUA010000213.1 Protein Homology CDS 8707 9108 . - 0 ID=cds-WP_075672399.1;Parent=gene-L2557_RS13705;Dbxref=GenBank:WP_075672399.1;Name=WP_075672399.1;Ontology_term=GO:0045893;gbkey=CDS;gene=crl;go_process=positive regulation of DNA-templated transcription|0045893||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244788.1;locus_tag=L2557_RS13705;product=sigma factor-binding protein Crl;protein_id=WP_075672399.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 9180 10430 . - . ID=gene-L2557_RS13710;Name=frsA;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=L2557_RS13710 NZ_JAIKUA010000213.1 Protein Homology CDS 9180 10430 . - 0 ID=cds-WP_099659856.1;Parent=gene-L2557_RS13710;Dbxref=GenBank:WP_099659856.1;Name=WP_099659856.1;Ontology_term=GO:0016788;gbkey=CDS;gene=frsA;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244789.1;locus_tag=L2557_RS13710;product=esterase FrsA;protein_id=WP_099659856.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 10632 11093 . - . ID=gene-L2557_RS13715;Name=gpt;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=L2557_RS13715 NZ_JAIKUA010000213.1 Protein Homology CDS 10632 11093 . - 0 ID=cds-WP_006534780.1;Parent=gene-L2557_RS13715;Dbxref=GenBank:WP_006534780.1;Name=WP_006534780.1;Ontology_term=GO:0009116,GO:0000310;gbkey=CDS;gene=gpt;go_function=xanthine phosphoribosyltransferase activity|0000310||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244790.1;locus_tag=L2557_RS13715;product=xanthine phosphoribosyltransferase;protein_id=WP_006534780.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 11445 12902 . + . ID=gene-L2557_RS13720;Name=pepD;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=L2557_RS13720 NZ_JAIKUA010000213.1 Protein Homology CDS 11445 12902 . + 0 ID=cds-WP_075672395.1;Parent=gene-L2557_RS13720;Dbxref=GenBank:WP_075672395.1;Name=WP_075672395.1;Ontology_term=GO:0006508,GO:0016787;gbkey=CDS;gene=pepD;go_function=hydrolase activity|0016787||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247394.1;locus_tag=L2557_RS13720;product=beta-Ala-His dipeptidase;protein_id=WP_075672395.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 13199 15361 . + . ID=gene-L2557_RS13725;Name=L2557_RS13725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13725 NZ_JAIKUA010000213.1 Protein Homology CDS 13199 15361 . + 0 ID=cds-WP_099659857.1;Parent=gene-L2557_RS13725;Dbxref=GenBank:WP_099659857.1;Name=WP_099659857.1;Ontology_term=GO:0015891,GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534783.1;locus_tag=L2557_RS13725;product=TonB-dependent siderophore receptor;protein_id=WP_099659857.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 15439 16494 . - . ID=gene-L2557_RS13730;Name=dinB;gbkey=Gene;gene=dinB;gene_biotype=protein_coding;locus_tag=L2557_RS13730 NZ_JAIKUA010000213.1 Protein Homology CDS 15439 16494 . - 0 ID=cds-WP_098943944.1;Parent=gene-L2557_RS13730;Dbxref=GenBank:WP_098943944.1;Name=WP_098943944.1;Ontology_term=GO:0006281,GO:0003684,GO:0003887;gbkey=CDS;gene=dinB;go_function=damaged DNA binding|0003684||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019704870.1;locus_tag=L2557_RS13730;product=DNA polymerase IV;protein_id=WP_098943944.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 16729 17601 . + . ID=gene-L2557_RS13735;Name=L2557_RS13735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13735 NZ_JAIKUA010000213.1 Protein Homology CDS 16729 17601 . + 0 ID=cds-WP_075672389.1;Parent=gene-L2557_RS13735;Dbxref=GenBank:WP_075672389.1;Name=WP_075672389.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244795.1;locus_tag=L2557_RS13735;product=glycerophosphodiester phosphodiesterase family protein;protein_id=WP_075672389.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 17693 17905 . + . ID=gene-L2557_RS13740;Name=L2557_RS13740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13740 NZ_JAIKUA010000213.1 Protein Homology CDS 17693 17905 . + 0 ID=cds-WP_072070896.1;Parent=gene-L2557_RS13740;Dbxref=GenBank:WP_072070896.1;Name=WP_072070896.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534787.1;locus_tag=L2557_RS13740;product=CsbD family protein;protein_id=WP_072070896.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 18055 18282 . - . ID=gene-L2557_RS13745;Name=nqrM;gbkey=Gene;gene=nqrM;gene_biotype=protein_coding;locus_tag=L2557_RS13745 NZ_JAIKUA010000213.1 Protein Homology CDS 18055 18282 . - 0 ID=cds-WP_036932601.1;Parent=gene-L2557_RS13745;Dbxref=GenBank:WP_036932601.1;Name=WP_036932601.1;gbkey=CDS;gene=nqrM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244797.1;locus_tag=L2557_RS13745;product=(Na+)-NQR maturation NqrM;protein_id=WP_036932601.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 18302 19324 . - . ID=gene-L2557_RS13750;Name=L2557_RS13750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13750 NZ_JAIKUA010000213.1 Protein Homology CDS 18302 19324 . - 0 ID=cds-WP_099659858.1;Parent=gene-L2557_RS13750;Dbxref=GenBank:WP_099659858.1;Name=WP_099659858.1;Ontology_term=GO:0017013,GO:0016740,GO:0046872,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transferase activity|0016740||IEA,metal ion binding|0046872||IEA;go_process=protein flavinylation|0017013||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244798.1;locus_tag=L2557_RS13750;product=FAD:protein FMN transferase;protein_id=WP_099659858.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 19405 20631 . - . ID=gene-L2557_RS13755;Name=nqrF;gbkey=Gene;gene=nqrF;gene_biotype=protein_coding;locus_tag=L2557_RS13755 NZ_JAIKUA010000213.1 Protein Homology CDS 19405 20631 . - 0 ID=cds-WP_075672385.1;Parent=gene-L2557_RS13755;Dbxref=GenBank:WP_075672385.1;Name=WP_075672385.1;Ontology_term=GO:0006814,GO:0016655,GO:0051537,GO:0016020;gbkey=CDS;gene=nqrF;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015835372.1;locus_tag=L2557_RS13755;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit F;protein_id=WP_075672385.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 20648 21244 . - . ID=gene-L2557_RS13760;Name=nqrE;gbkey=Gene;gene=nqrE;gene_biotype=protein_coding;locus_tag=L2557_RS13760 NZ_JAIKUA010000213.1 Protein Homology CDS 20648 21244 . - 0 ID=cds-WP_006534792.1;Parent=gene-L2557_RS13760;Dbxref=GenBank:WP_006534792.1;Name=WP_006534792.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrE;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225269.1;locus_tag=L2557_RS13760;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=WP_006534792.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 21250 21879 . - . ID=gene-L2557_RS13765;Name=L2557_RS13765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13765 NZ_JAIKUA010000213.1 Protein Homology CDS 21250 21879 . - 0 ID=cds-WP_036932605.1;Parent=gene-L2557_RS13765;Dbxref=GenBank:WP_036932605.1;Name=WP_036932605.1;Ontology_term=GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323797.1;locus_tag=L2557_RS13765;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit D;protein_id=WP_036932605.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 21872 22657 . - . ID=gene-L2557_RS13770;Name=L2557_RS13770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13770 NZ_JAIKUA010000213.1 Protein Homology CDS 21872 22657 . - 0 ID=cds-WP_075672381.1;Parent=gene-L2557_RS13770;Dbxref=GenBank:WP_075672381.1;Name=WP_075672381.1;Ontology_term=GO:0006814,GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534795.1;locus_tag=L2557_RS13770;product=Na(+)-translocating NADH-quinone reductase subunit C;protein_id=WP_075672381.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 22650 23888 . - . ID=gene-L2557_RS13775;Name=L2557_RS13775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13775 NZ_JAIKUA010000213.1 Protein Homology CDS 22650 23888 . - 0 ID=cds-WP_075672379.1;Parent=gene-L2557_RS13775;Dbxref=GenBank:WP_075672379.1;Name=WP_075672379.1;Ontology_term=GO:0022904,GO:0055085,GO:0010181,GO:0016655,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=FMN binding|0010181||IEA,oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=respiratory electron transport chain|0022904||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225266.1;locus_tag=L2557_RS13775;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit B;protein_id=WP_075672379.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 23892 25232 . - . ID=gene-L2557_RS13780;Name=L2557_RS13780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13780 NZ_JAIKUA010000213.1 Protein Homology CDS 23892 25232 . - 0 ID=cds-WP_075672377.1;Parent=gene-L2557_RS13780;Dbxref=GenBank:WP_075672377.1;Name=WP_075672377.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247390.1;locus_tag=L2557_RS13780;product=Na(+)-translocating NADH-quinone reductase subunit A;protein_id=WP_075672377.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 25648 26415 . + . ID=gene-L2557_RS13785;Name=L2557_RS13785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13785 NZ_JAIKUA010000213.1 Protein Homology CDS 25648 26415 . + 0 ID=cds-WP_223673842.1;Parent=gene-L2557_RS13785;Dbxref=GenBank:WP_223673842.1;Name=WP_223673842.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252270.1;locus_tag=L2557_RS13785;product=L%2CD-transpeptidase family protein;protein_id=WP_223673842.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 26386 27153 . - . ID=gene-L2557_RS13790;Name=L2557_RS13790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13790 NZ_JAIKUA010000213.1 Protein Homology CDS 26386 27153 . - 0 ID=cds-WP_075672373.1;Parent=gene-L2557_RS13790;Dbxref=GenBank:WP_075672373.1;Name=WP_075672373.1;Ontology_term=GO:0006541,GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247388.1;locus_tag=L2557_RS13790;product=class II glutamine amidotransferase;protein_id=WP_075672373.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 27207 27785 . - . ID=gene-L2557_RS13795;Name=lpcA;gbkey=Gene;gene=lpcA;gene_biotype=protein_coding;locus_tag=L2557_RS13795 NZ_JAIKUA010000213.1 Protein Homology CDS 27207 27785 . - 0 ID=cds-WP_075672371.1;Parent=gene-L2557_RS13795;Dbxref=GenBank:WP_075672371.1;Name=WP_075672371.1;Ontology_term=GO:1901135,GO:0008968;gbkey=CDS;gene=lpcA;go_function=D-sedoheptulose 7-phosphate isomerase activity|0008968||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459308.1;locus_tag=L2557_RS13795;product=D-sedoheptulose 7-phosphate isomerase;protein_id=WP_075672371.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 28024 30471 . + . ID=gene-L2557_RS13800;Name=fadE;gbkey=Gene;gene=fadE;gene_biotype=protein_coding;locus_tag=L2557_RS13800 NZ_JAIKUA010000213.1 Protein Homology CDS 28024 30471 . + 0 ID=cds-WP_075672369.1;Parent=gene-L2557_RS13800;Dbxref=GenBank:WP_075672369.1;Name=WP_075672369.1;Ontology_term=GO:0033539,GO:0003995,GO:0050660;gbkey=CDS;gene=fadE;go_function=acyl-CoA dehydrogenase activity|0003995||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=fatty acid beta-oxidation using acyl-CoA dehydrogenase|0033539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628342.1;locus_tag=L2557_RS13800;product=acyl-CoA dehydrogenase FadE;protein_id=WP_075672369.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 30582 31823 . - . ID=gene-L2557_RS13805;Name=lysA;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=L2557_RS13805 NZ_JAIKUA010000213.1 Protein Homology CDS 30582 31823 . - 0 ID=cds-WP_075672367.1;Parent=gene-L2557_RS13805;Dbxref=GenBank:WP_075672367.1;Name=WP_075672367.1;Ontology_term=GO:0009089,GO:0008836;gbkey=CDS;gene=lysA;go_function=diaminopimelate decarboxylase activity|0008836||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082449.1;locus_tag=L2557_RS13805;product=diaminopimelate decarboxylase;protein_id=WP_075672367.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 31936 32862 . + . ID=gene-L2557_RS13810;Name=L2557_RS13810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13810 NZ_JAIKUA010000213.1 Protein Homology CDS 31936 32862 . + 0 ID=cds-WP_075672365.1;Parent=gene-L2557_RS13810;Dbxref=GenBank:WP_075672365.1;Name=WP_075672365.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244812.1;locus_tag=L2557_RS13810;product=LysR family transcriptional regulator;protein_id=WP_075672365.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 32839 33759 . - . ID=gene-L2557_RS13815;Name=L2557_RS13815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13815 NZ_JAIKUA010000213.1 Protein Homology CDS 32839 33759 . - 0 ID=cds-WP_075672363.1;Parent=gene-L2557_RS13815;Dbxref=GenBank:WP_075672363.1;Name=WP_075672363.1;Ontology_term=GO:0006355,GO:0001216,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA-binding transcription activator activity|0001216||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011145516.1;locus_tag=L2557_RS13815;product=LysR family transcriptional regulator;protein_id=WP_075672363.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 33865 34737 . + . ID=gene-L2557_RS13820;Name=L2557_RS13820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13820 NZ_JAIKUA010000213.1 Protein Homology CDS 33865 34737 . + 0 ID=cds-WP_099659861.1;Parent=gene-L2557_RS13820;Dbxref=GenBank:WP_099659861.1;Name=WP_099659861.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247385.1;locus_tag=L2557_RS13820;product=MBL fold metallo-hydrolase;protein_id=WP_099659861.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 34725 35393 . + . ID=gene-L2557_RS13825;Name=L2557_RS13825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13825 NZ_JAIKUA010000213.1 Protein Homology CDS 34725 35393 . + 0 ID=cds-WP_075672359.1;Parent=gene-L2557_RS13825;Dbxref=GenBank:WP_075672359.1;Name=WP_075672359.1;Ontology_term=GO:0016667;gbkey=CDS;go_function=oxidoreductase activity%2C acting on a sulfur group of donors|0016667||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827570.1;locus_tag=L2557_RS13825;product=DsbA family protein;protein_id=WP_075672359.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 35504 36157 . - . ID=gene-L2557_RS13830;Name=L2557_RS13830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13830 NZ_JAIKUA010000213.1 Protein Homology CDS 35504 36157 . - 0 ID=cds-WP_075672357.1;Parent=gene-L2557_RS13830;Dbxref=GenBank:WP_075672357.1;Name=WP_075672357.1;Ontology_term=GO:0004190,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;inference=COORDINATES: protein motif:HMM:NF013632.6;locus_tag=L2557_RS13830;product=prepilin peptidase;protein_id=WP_075672357.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 36409 37140 . + . ID=gene-L2557_RS13835;Name=rsmE;gbkey=Gene;gene=rsmE;gene_biotype=protein_coding;locus_tag=L2557_RS13835 NZ_JAIKUA010000213.1 Protein Homology CDS 36409 37140 . + 0 ID=cds-WP_099659863.1;Parent=gene-L2557_RS13835;Dbxref=GenBank:WP_099659863.1;Name=WP_099659863.1;Ontology_term=GO:0006364,GO:0008168;gbkey=CDS;gene=rsmE;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311849.2;locus_tag=L2557_RS13835;product=16S rRNA (uracil(1498)-N(3))-methyltransferase;protein_id=WP_099659863.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 37151 38107 . + . ID=gene-L2557_RS13840;Name=gshB;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=L2557_RS13840 NZ_JAIKUA010000213.1 Protein Homology CDS 37151 38107 . + 0 ID=cds-WP_075672353.1;Parent=gene-L2557_RS13840;Dbxref=GenBank:WP_075672353.1;Name=WP_075672353.1;Ontology_term=GO:0006750,GO:0004363,GO:0005524,GO:0046872;gbkey=CDS;gene=gshB;go_function=glutathione synthase activity|0004363||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process=glutathione biosynthetic process|0006750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244820.1;locus_tag=L2557_RS13840;product=glutathione synthase;protein_id=WP_075672353.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 38250 38813 . + . ID=gene-L2557_RS13845;Name=L2557_RS13845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13845 NZ_JAIKUA010000213.1 Protein Homology CDS 38250 38813 . + 0 ID=cds-WP_023581015.1;Parent=gene-L2557_RS13845;Dbxref=GenBank:WP_023581015.1;Name=WP_023581015.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015841840.1;locus_tag=L2557_RS13845;product=YqgE/AlgH family protein;protein_id=WP_023581015.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 38813 39232 . + . ID=gene-L2557_RS13850;Name=ruvX;gbkey=Gene;gene=ruvX;gene_biotype=protein_coding;locus_tag=L2557_RS13850 NZ_JAIKUA010000213.1 Protein Homology CDS 38813 39232 . + 0 ID=cds-WP_075672351.1;Parent=gene-L2557_RS13850;Dbxref=GenBank:WP_075672351.1;Name=WP_075672351.1;Ontology_term=GO:0006364;gbkey=CDS;gene=ruvX;go_process=rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244822.1;locus_tag=L2557_RS13850;product=Holliday junction resolvase RuvX;protein_id=WP_075672351.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 39281 40285 . - . ID=gene-L2557_RS13855;Name=L2557_RS13855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13855 NZ_JAIKUA010000213.1 Protein Homology CDS 39281 40285 . - 0 ID=cds-WP_075672349.1;Parent=gene-L2557_RS13855;Dbxref=GenBank:WP_075672349.1;Name=WP_075672349.1;Ontology_term=GO:0043107,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=type IV pilus-dependent motility|0043107||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010846606.1;locus_tag=L2557_RS13855;product=type IV pilus twitching motility protein PilT;protein_id=WP_075672349.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 40307 41005 . + . ID=gene-L2557_RS13860;Name=L2557_RS13860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13860 NZ_JAIKUA010000213.1 Protein Homology CDS 40307 41005 . + 0 ID=cds-WP_075672347.1;Parent=gene-L2557_RS13860;Dbxref=GenBank:WP_075672347.1;Name=WP_075672347.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123290.1;locus_tag=L2557_RS13860;product=YggS family pyridoxal phosphate-dependent enzyme;protein_id=WP_075672347.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 41020 41838 . + . ID=gene-L2557_RS13865;Name=proC;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=L2557_RS13865 NZ_JAIKUA010000213.1 Protein Homology CDS 41020 41838 . + 0 ID=cds-WP_075672345.1;Parent=gene-L2557_RS13865;Dbxref=GenBank:WP_075672345.1;Name=WP_075672345.1;Ontology_term=GO:0055129,GO:0004735;gbkey=CDS;gene=proC;go_function=pyrroline-5-carboxylate reductase activity|0004735||IEA;go_process=L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252280.1;locus_tag=L2557_RS13865;product=pyrroline-5-carboxylate reductase;protein_id=WP_075672345.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 41857 42414 . + . ID=gene-L2557_RS13870;Name=L2557_RS13870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13870 NZ_JAIKUA010000213.1 Protein Homology CDS 41857 42414 . + 0 ID=cds-WP_075672343.1;Parent=gene-L2557_RS13870;Dbxref=GenBank:WP_075672343.1;Name=WP_075672343.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247379.1;locus_tag=L2557_RS13870;product=YggT family protein;protein_id=WP_075672343.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 42426 43019 . + . ID=gene-L2557_RS13875;Name=L2557_RS13875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13875 NZ_JAIKUA010000213.1 Protein Homology CDS 42426 43019 . + 0 ID=cds-WP_075672341.1;Parent=gene-L2557_RS13875;Dbxref=GenBank:WP_075672341.1;Name=WP_075672341.1;Ontology_term=GO:0009143,GO:0047429;gbkey=CDS;go_function=nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleoside triphosphate catabolic process|0009143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011095132.1;locus_tag=L2557_RS13875;product=XTP/dITP diphosphatase;protein_id=WP_075672341.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 43012 44142 . + . ID=gene-L2557_RS13880;Name=hemW;gbkey=Gene;gene=hemW;gene_biotype=protein_coding;locus_tag=L2557_RS13880 NZ_JAIKUA010000213.1 Protein Homology CDS 43012 44142 . + 0 ID=cds-WP_075672339.1;Parent=gene-L2557_RS13880;Dbxref=GenBank:WP_075672339.1;Name=WP_075672339.1;Ontology_term=GO:0006779,GO:0051539,GO:0051989,GO:0005737;gbkey=CDS;gene=hemW;go_component=cytoplasm|0005737||IEA;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,coproporphyrinogen dehydrogenase activity|0051989||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244830.1;locus_tag=L2557_RS13880;product=radical SAM family heme chaperone HemW;protein_id=WP_075672339.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 44238 45188 . - . ID=gene-L2557_RS13885;Name=L2557_RS13885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13885 NZ_JAIKUA010000213.1 Protein Homology CDS 44238 45188 . - 0 ID=cds-WP_099659865.1;Parent=gene-L2557_RS13885;Dbxref=GenBank:WP_099659865.1;Name=WP_099659865.1;Ontology_term=GO:0005524,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247378.1;locus_tag=L2557_RS13885;product=siderophore ABC transporter substrate-binding protein;protein_id=WP_099659865.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 45335 46078 . - . ID=gene-L2557_RS13890;Name=L2557_RS13890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13890 NZ_JAIKUA010000213.1 Protein Homology CDS 45335 46078 . - 0 ID=cds-WP_235410134.1;Parent=gene-L2557_RS13890;Dbxref=GenBank:WP_235410134.1;Name=WP_235410134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534833.1;locus_tag=L2557_RS13890;product=DUF2884 family protein;protein_id=WP_235410134.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 46100 47026 . - . ID=gene-L2557_RS13895;Name=glsB;gbkey=Gene;gene=glsB;gene_biotype=protein_coding;locus_tag=L2557_RS13895 NZ_JAIKUA010000213.1 Protein Homology CDS 46100 47026 . - 0 ID=cds-WP_075672333.1;Parent=gene-L2557_RS13895;Dbxref=GenBank:WP_075672333.1;Name=WP_075672333.1;Ontology_term=GO:0006541,GO:0004359;gbkey=CDS;gene=glsB;go_function=glutaminase activity|0004359||IEA;go_process=glutamine metabolic process|0006541||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367555.1;locus_tag=L2557_RS13895;product=glutaminase B;protein_id=WP_075672333.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 47101 47427 . - . ID=gene-L2557_RS13900;Name=L2557_RS13900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13900 NZ_JAIKUA010000213.1 Protein Homology CDS 47101 47427 . - 0 ID=cds-WP_023581025.1;Parent=gene-L2557_RS13900;Dbxref=GenBank:WP_023581025.1;Name=WP_023581025.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123274.1;locus_tag=L2557_RS13900;product=YggL family protein;protein_id=WP_023581025.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 47427 48146 . - . ID=gene-L2557_RS13905;Name=trmB;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;locus_tag=L2557_RS13905 NZ_JAIKUA010000213.1 Protein Homology CDS 47427 48146 . - 0 ID=cds-WP_099659867.1;Parent=gene-L2557_RS13905;Dbxref=GenBank:WP_099659867.1;Name=WP_099659867.1;Ontology_term=GO:0006400,GO:0008176;gbkey=CDS;gene=trmB;go_function=tRNA (guanine(46)-N7)-methyltransferase activity|0008176||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462025.1;locus_tag=L2557_RS13905;product=tRNA (guanosine(46)-N7)-methyltransferase TrmB;protein_id=WP_099659867.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 48363 49403 . + . ID=gene-L2557_RS13910;Name=mutY;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=L2557_RS13910 NZ_JAIKUA010000213.1 Protein Homology CDS 48363 49403 . + 0 ID=cds-WP_075672329.1;Parent=gene-L2557_RS13910;Dbxref=GenBank:WP_075672329.1;Name=WP_075672329.1;Ontology_term=GO:0006281,GO:0019104;gbkey=CDS;gene=mutY;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628334.1;locus_tag=L2557_RS13910;product=A/G-specific adenine glycosylase;protein_id=WP_075672329.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 49433 49705 . + . ID=gene-L2557_RS13915;Name=L2557_RS13915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13915 NZ_JAIKUA010000213.1 Protein Homology CDS 49433 49705 . + 0 ID=cds-WP_006534840.1;Parent=gene-L2557_RS13915;Dbxref=GenBank:WP_006534840.1;Name=WP_006534840.1;Ontology_term=GO:0005506;gbkey=CDS;go_function=iron ion binding|0005506||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012442550.1;locus_tag=L2557_RS13915;product=oxidative damage protection protein;protein_id=WP_006534840.1;transl_table=11 NZ_JAIKUA010000213.1 RefSeq gene 49769 50839 . + . ID=gene-L2557_RS13920;Name=mltC;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=L2557_RS13920 NZ_JAIKUA010000213.1 Protein Homology CDS 49769 50839 . + 0 ID=cds-WP_075672445.1;Parent=gene-L2557_RS13920;Dbxref=GenBank:WP_075672445.1;Name=WP_075672445.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltC;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827578.1;locus_tag=L2557_RS13920;product=membrane-bound lytic murein transglycosylase MltC;protein_id=WP_075672445.1;transl_table=11 ##sequence-region NZ_JAIKUA010000214.1 1 6310 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000214.1 RefSeq region 1 6310 . + . ID=NZ_JAIKUA010000214.1:1..6310;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000214.1 RefSeq gene 37 669 . - . ID=gene-L2557_RS13925;Name=L2557_RS13925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13925 NZ_JAIKUA010000214.1 Protein Homology CDS 37 669 . - 0 ID=cds-WP_075674283.1;Parent=gene-L2557_RS13925;Dbxref=GenBank:WP_075674283.1;Name=WP_075674283.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245045.1;locus_tag=L2557_RS13925;product=helix-turn-helix transcriptional regulator;protein_id=WP_075674283.1;transl_table=11 NZ_JAIKUA010000214.1 RefSeq gene 734 1366 . - . ID=gene-L2557_RS13930;Name=L2557_RS13930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13930 NZ_JAIKUA010000214.1 Protein Homology CDS 734 1366 . - 0 ID=cds-WP_099659952.1;Parent=gene-L2557_RS13930;Dbxref=GenBank:WP_099659952.1;Name=WP_099659952.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247259.1;locus_tag=L2557_RS13930;product=TetR/AcrR family transcriptional regulator;protein_id=WP_099659952.1;transl_table=11 NZ_JAIKUA010000214.1 RefSeq gene 1599 2810 . + . ID=gene-L2557_RS13935;Name=L2557_RS13935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13935 NZ_JAIKUA010000214.1 Protein Homology CDS 1599 2810 . + 0 ID=cds-WP_075674285.1;Parent=gene-L2557_RS13935;Dbxref=GenBank:WP_075674285.1;Name=WP_075674285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247258.1;locus_tag=L2557_RS13935;product=Tm-1-like ATP-binding domain-containing protein;protein_id=WP_075674285.1;transl_table=11 NZ_JAIKUA010000214.1 RefSeq gene 2827 3654 . + . ID=gene-L2557_RS13940;Name=L2557_RS13940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13940 NZ_JAIKUA010000214.1 Protein Homology CDS 2827 3654 . + 0 ID=cds-WP_099659953.1;Parent=gene-L2557_RS13940;Dbxref=GenBank:WP_099659953.1;Name=WP_099659953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260569.1;locus_tag=L2557_RS13940;product=phosphoenolpyruvate hydrolase family protein;protein_id=WP_099659953.1;transl_table=11 NZ_JAIKUA010000214.1 RefSeq gene 3741 4640 . - . ID=gene-L2557_RS13945;Name=L2557_RS13945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13945 NZ_JAIKUA010000214.1 Protein Homology CDS 3741 4640 . - 0 ID=cds-WP_075674287.1;Parent=gene-L2557_RS13945;Dbxref=GenBank:WP_075674287.1;Name=WP_075674287.1;Ontology_term=GO:0009089,GO:0047850;gbkey=CDS;go_function=diaminopimelate dehydrogenase activity|0047850||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252536.1;locus_tag=L2557_RS13945;product=diaminopimelate dehydrogenase;protein_id=WP_075674287.1;transl_table=11 NZ_JAIKUA010000214.1 RefSeq gene 4839 6179 . + . ID=gene-L2557_RS13950;Name=L2557_RS13950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13950 NZ_JAIKUA010000214.1 Protein Homology CDS 4839 6179 . + 0 ID=cds-WP_099659954.1;Parent=gene-L2557_RS13950;Dbxref=GenBank:WP_099659954.1;Name=WP_099659954.1;Ontology_term=GO:0006855,GO:0042910,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transmembrane transport|0006855||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245051.1;locus_tag=L2557_RS13950;product=MATE family efflux transporter;protein_id=WP_099659954.1;transl_table=11 ##sequence-region NZ_JAIKUA010000215.1 1 3709 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000215.1 RefSeq region 1 3709 . + . ID=NZ_JAIKUA010000215.1:1..3709;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000215.1 RefSeq gene 553 951 . - . ID=gene-L2557_RS13955;Name=L2557_RS13955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13955 NZ_JAIKUA010000215.1 Protein Homology CDS 553 951 . - 0 ID=cds-WP_235410135.1;Parent=gene-L2557_RS13955;Dbxref=GenBank:WP_235410135.1;Name=WP_235410135.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025298.6;locus_tag=L2557_RS13955;product=DNA/RNA non-specific endonuclease;protein_id=WP_235410135.1;transl_table=11 NZ_JAIKUA010000215.1 RefSeq pseudogene 923 2054 . - . ID=gene-L2557_RS13960;Name=L2557_RS13960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS13960;pseudo=true NZ_JAIKUA010000215.1 Protein Homology CDS 923 2054 . - 0 ID=cds-L2557_RS13960;Parent=gene-L2557_RS13960;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014609912.1;locus_tag=L2557_RS13960;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JAIKUA010000215.1 RefSeq gene 2282 2776 . - . ID=gene-L2557_RS13965;Name=L2557_RS13965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13965 NZ_JAIKUA010000215.1 GeneMarkS-2+ CDS 2282 2776 . - 0 ID=cds-WP_235410136.1;Parent=gene-L2557_RS13965;Dbxref=GenBank:WP_235410136.1;Name=WP_235410136.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS13965;product=hypothetical protein;protein_id=WP_235410136.1;transl_table=11 NZ_JAIKUA010000215.1 RefSeq pseudogene 2773 3709 . - . ID=gene-L2557_RS13970;Name=L2557_RS13970;end_range=3709,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS13970;partial=true;pseudo=true NZ_JAIKUA010000215.1 Protein Homology CDS 2773 3709 . - 1 ID=cds-L2557_RS13970;Parent=gene-L2557_RS13970;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3709,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104440.1;locus_tag=L2557_RS13970;partial=true;product=hemagglutinin repeat-containing protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAIKUA010000216.1 1 5507 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000216.1 RefSeq region 1 5507 . + . ID=NZ_JAIKUA010000216.1:1..5507;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000216.1 RefSeq gene 487 1254 . + . ID=gene-L2557_RS13975;Name=L2557_RS13975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13975 NZ_JAIKUA010000216.1 Protein Homology CDS 487 1254 . + 0 ID=cds-WP_075674316.1;Parent=gene-L2557_RS13975;Dbxref=GenBank:WP_075674316.1;Name=WP_075674316.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242909.1;locus_tag=L2557_RS13975;product=GNAT family N-acetyltransferase;protein_id=WP_075674316.1;transl_table=11 NZ_JAIKUA010000216.1 RefSeq gene 1307 1906 . - . ID=gene-L2557_RS13980;Name=L2557_RS13980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13980 NZ_JAIKUA010000216.1 Protein Homology CDS 1307 1906 . - 0 ID=cds-WP_099660414.1;Parent=gene-L2557_RS13980;Dbxref=GenBank:WP_099660414.1;Name=WP_099660414.1;Ontology_term=GO:0016407;gbkey=CDS;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004862093.1;locus_tag=L2557_RS13980;product=sugar O-acetyltransferase;protein_id=WP_099660414.1;transl_table=11 NZ_JAIKUA010000216.1 RefSeq gene 1988 2746 . - . ID=gene-L2557_RS13985;Name=L2557_RS13985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13985 NZ_JAIKUA010000216.1 Protein Homology CDS 1988 2746 . - 0 ID=cds-WP_075674318.1;Parent=gene-L2557_RS13985;Dbxref=GenBank:WP_075674318.1;Name=WP_075674318.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237636.1;locus_tag=L2557_RS13985;product=DJ-1/PfpI family protein;protein_id=WP_075674318.1;transl_table=11 NZ_JAIKUA010000216.1 RefSeq gene 2832 3449 . + . ID=gene-L2557_RS13990;Name=L2557_RS13990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13990 NZ_JAIKUA010000216.1 Protein Homology CDS 2832 3449 . + 0 ID=cds-WP_235410137.1;Parent=gene-L2557_RS13990;Dbxref=GenBank:WP_235410137.1;Name=WP_235410137.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237638.1;locus_tag=L2557_RS13990;product=TetR/AcrR family transcriptional regulator;protein_id=WP_235410137.1;transl_table=11 NZ_JAIKUA010000216.1 RefSeq gene 3479 4204 . - . ID=gene-L2557_RS13995;Name=L2557_RS13995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS13995 NZ_JAIKUA010000216.1 Protein Homology CDS 3479 4204 . - 0 ID=cds-WP_164530494.1;Parent=gene-L2557_RS13995;Dbxref=GenBank:WP_164530494.1;Name=WP_164530494.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911215.1;locus_tag=L2557_RS13995;product=sulfite exporter TauE/SafE family protein;protein_id=WP_164530494.1;transl_table=11 NZ_JAIKUA010000216.1 RefSeq gene 4349 5230 . + . ID=gene-L2557_RS14000;Name=L2557_RS14000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14000 NZ_JAIKUA010000216.1 Protein Homology CDS 4349 5230 . + 0 ID=cds-WP_083629140.1;Parent=gene-L2557_RS14000;Dbxref=GenBank:WP_083629140.1;Name=WP_083629140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536799.1;locus_tag=L2557_RS14000;product=LysR substrate-binding domain-containing protein;protein_id=WP_083629140.1;transl_table=11 ##sequence-region NZ_JAIKUA010000217.1 1 280 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000217.1 RefSeq region 1 280 . + . ID=NZ_JAIKUA010000217.1:1..280;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000217.1 RefSeq gene 1 280 . - . ID=gene-L2557_RS14005;Name=L2557_RS14005;end_range=280,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14005;partial=true;start_range=.,1 NZ_JAIKUA010000217.1 Protein Homology CDS 1 280 . - 1 ID=cds-WP_328253207.1;Parent=gene-L2557_RS14005;Dbxref=GenBank:WP_328253207.1;Name=WP_328253207.1;end_range=280,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248545.1;locus_tag=L2557_RS14005;partial=true;product=biotin/lipoyl-containing protein;protein_id=WP_328253207.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000218.1 1 12661 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000218.1 RefSeq region 1 12661 . + . ID=NZ_JAIKUA010000218.1:1..12661;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000218.1 RefSeq gene 127 390 . - . ID=gene-L2557_RS14010;Name=L2557_RS14010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14010 NZ_JAIKUA010000218.1 Protein Homology CDS 127 390 . - 0 ID=cds-WP_075672706.1;Parent=gene-L2557_RS14010;Dbxref=GenBank:WP_075672706.1;Name=WP_075672706.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245657.1;locus_tag=L2557_RS14010;product=DUF1435 family protein;protein_id=WP_075672706.1;transl_table=11 NZ_JAIKUA010000218.1 RefSeq gene 598 1146 . - . ID=gene-L2557_RS14015;Name=L2557_RS14015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14015 NZ_JAIKUA010000218.1 Protein Homology CDS 598 1146 . - 0 ID=cds-WP_075672707.1;Parent=gene-L2557_RS14015;Dbxref=GenBank:WP_075672707.1;Name=WP_075672707.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536125.1;locus_tag=L2557_RS14015;product=GNAT family N-acetyltransferase;protein_id=WP_075672707.1;transl_table=11 NZ_JAIKUA010000218.1 RefSeq gene 1149 2780 . - . ID=gene-L2557_RS14020;Name=L2557_RS14020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14020 NZ_JAIKUA010000218.1 Protein Homology CDS 1149 2780 . - 0 ID=cds-WP_099660237.1;Parent=gene-L2557_RS14020;Dbxref=GenBank:WP_099660237.1;Name=WP_099660237.1;Ontology_term=GO:0044341,GO:0005436,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=sodium:phosphate symporter activity|0005436||IEA;go_process=sodium-dependent phosphate transport|0044341||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628531.1;locus_tag=L2557_RS14020;product=Na/Pi cotransporter family protein;protein_id=WP_099660237.1;transl_table=11 NZ_JAIKUA010000218.1 RefSeq gene 3202 4641 . - . ID=gene-L2557_RS14025;Name=phoA;gbkey=Gene;gene=phoA;gene_biotype=protein_coding;locus_tag=L2557_RS14025 NZ_JAIKUA010000218.1 Protein Homology CDS 3202 4641 . - 0 ID=cds-WP_075672709.1;Parent=gene-L2557_RS14025;Dbxref=GenBank:WP_075672709.1;Name=WP_075672709.1;Ontology_term=GO:0016791;gbkey=CDS;gene=phoA;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249299.1;locus_tag=L2557_RS14025;product=alkaline phosphatase;protein_id=WP_075672709.1;transl_table=11 NZ_JAIKUA010000218.1 RefSeq gene 4853 6385 . - . ID=gene-L2557_RS14030;Name=L2557_RS14030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14030 NZ_JAIKUA010000218.1 Protein Homology CDS 4853 6385 . - 0 ID=cds-WP_235410138.1;Parent=gene-L2557_RS14030;Dbxref=GenBank:WP_235410138.1;Name=WP_235410138.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827615.1;locus_tag=L2557_RS14030;product=alpha/beta hydrolase-fold protein;protein_id=WP_235410138.1;transl_table=11 NZ_JAIKUA010000218.1 RefSeq gene 6568 7707 . - . ID=gene-L2557_RS14035;Name=L2557_RS14035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14035 NZ_JAIKUA010000218.1 Protein Homology CDS 6568 7707 . - 0 ID=cds-WP_083629087.1;Parent=gene-L2557_RS14035;Dbxref=GenBank:WP_083629087.1;Name=WP_083629087.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628528.1;locus_tag=L2557_RS14035;product=ElyC/SanA/YdcF family protein;protein_id=WP_083629087.1;transl_table=11 NZ_JAIKUA010000218.1 RefSeq gene 8089 9333 . - . ID=gene-L2557_RS14040;Name=nadR;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=L2557_RS14040 NZ_JAIKUA010000218.1 Protein Homology CDS 8089 9333 . - 0 ID=cds-WP_075672710.1;Parent=gene-L2557_RS14040;Dbxref=GenBank:WP_075672710.1;Name=WP_075672710.1;Ontology_term=GO:0009058,GO:0000309,GO:0003677,GO:0050262;gbkey=CDS;gene=nadR;go_function=nicotinamide-nucleotide adenylyltransferase activity|0000309||IEA,DNA binding|0003677||IEA,ribosylnicotinamide kinase activity|0050262||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245666.1;locus_tag=L2557_RS14040;product=multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR;protein_id=WP_075672710.1;transl_table=11 NZ_JAIKUA010000218.1 RefSeq gene 9345 10736 . - . ID=gene-L2557_RS14045;Name=radA;gbkey=Gene;gene=radA;gene_biotype=protein_coding;locus_tag=L2557_RS14045 NZ_JAIKUA010000218.1 Protein Homology CDS 9345 10736 . - 0 ID=cds-WP_075672711.1;Parent=gene-L2557_RS14045;Dbxref=GenBank:WP_075672711.1;Name=WP_075672711.1;Ontology_term=GO:0006281,GO:0003684,GO:0005524;gbkey=CDS;gene=radA;go_function=damaged DNA binding|0003684||IEA,ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249295.1;locus_tag=L2557_RS14045;product=DNA repair protein RadA;protein_id=WP_075672711.1;transl_table=11 NZ_JAIKUA010000218.1 RefSeq gene 10774 11751 . - . ID=gene-L2557_RS14050;Name=serB;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=L2557_RS14050 NZ_JAIKUA010000218.1 Protein Homology CDS 10774 11751 . - 0 ID=cds-WP_075672712.1;Parent=gene-L2557_RS14050;Dbxref=GenBank:WP_075672712.1;Name=WP_075672712.1;Ontology_term=GO:0006564,GO:0036424;gbkey=CDS;gene=serB;go_function=L-phosphoserine phosphatase activity|0036424||IEA;go_process=L-serine biosynthetic process|0006564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004716354.1;locus_tag=L2557_RS14050;product=phosphoserine phosphatase;protein_id=WP_075672712.1;transl_table=11 NZ_JAIKUA010000218.1 RefSeq gene 11861 12577 . + . ID=gene-L2557_RS14055;Name=L2557_RS14055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14055 NZ_JAIKUA010000218.1 Protein Homology CDS 11861 12577 . + 0 ID=cds-WP_075672713.1;Parent=gene-L2557_RS14055;Dbxref=GenBank:WP_075672713.1;Name=WP_075672713.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245669.1;locus_tag=L2557_RS14055;product=YtjB family periplasmic protein;protein_id=WP_075672713.1;transl_table=11 ##sequence-region NZ_JAIKUA010000219.1 1 612 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000219.1 RefSeq region 1 612 . + . ID=NZ_JAIKUA010000219.1:1..612;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000219.1 RefSeq gene 1 612 . - . ID=gene-L2557_RS14060;Name=L2557_RS14060;end_range=612,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14060;partial=true;start_range=.,1 NZ_JAIKUA010000219.1 GeneMarkS-2+ CDS 1 612 . - 1 ID=cds-WP_235410139.1;Parent=gene-L2557_RS14060;Dbxref=GenBank:WP_235410139.1;Name=WP_235410139.1;end_range=612,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS14060;partial=true;product=hypothetical protein;protein_id=WP_235410139.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000022.1 1 27623 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000022.1 RefSeq region 1 27623 . + . ID=NZ_JAIKUA010000022.1:1..27623;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000022.1 RefSeq gene 23 2509 . + . ID=gene-L2557_RS02415;Name=L2557_RS02415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02415 NZ_JAIKUA010000022.1 Protein Homology CDS 23 2509 . + 0 ID=cds-WP_075673678.1;Parent=gene-L2557_RS02415;Dbxref=GenBank:WP_075673678.1;Name=WP_075673678.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259583.1;locus_tag=L2557_RS02415;product=fimbria/pilus outer membrane usher protein;protein_id=WP_075673678.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 2540 3304 . + . ID=gene-L2557_RS02420;Name=L2557_RS02420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02420 NZ_JAIKUA010000022.1 Protein Homology CDS 2540 3304 . + 0 ID=cds-WP_075673677.1;Parent=gene-L2557_RS02420;Dbxref=GenBank:WP_075673677.1;Name=WP_075673677.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533481.1;locus_tag=L2557_RS02420;product=fimbrial biogenesis chaperone;protein_id=WP_075673677.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 3330 4400 . + . ID=gene-L2557_RS02425;Name=L2557_RS02425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02425 NZ_JAIKUA010000022.1 Protein Homology CDS 3330 4400 . + 0 ID=cds-WP_075673676.1;Parent=gene-L2557_RS02425;Dbxref=GenBank:WP_075673676.1;Name=WP_075673676.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533482.1;locus_tag=L2557_RS02425;product=fimbrial protein;protein_id=WP_075673676.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 4400 4948 . + . ID=gene-L2557_RS02430;Name=L2557_RS02430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02430 NZ_JAIKUA010000022.1 Protein Homology CDS 4400 4948 . + 0 ID=cds-WP_075673675.1;Parent=gene-L2557_RS02430;Dbxref=GenBank:WP_075673675.1;Name=WP_075673675.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243880.1;locus_tag=L2557_RS02430;product=fimbrial protein;protein_id=WP_075673675.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 4952 5482 . - . ID=gene-L2557_RS02435;Name=tadA;gbkey=Gene;gene=tadA;gene_biotype=protein_coding;locus_tag=L2557_RS02435 NZ_JAIKUA010000022.1 Protein Homology CDS 4952 5482 . - 0 ID=cds-WP_075673674.1;Parent=gene-L2557_RS02435;Dbxref=GenBank:WP_075673674.1;Name=WP_075673674.1;Ontology_term=GO:0002100,GO:0008251,GO:0008270;gbkey=CDS;gene=tadA;go_function=tRNA-specific adenosine deaminase activity|0008251||IEA,zinc ion binding|0008270||IEA;go_process=tRNA wobble adenosine to inosine editing|0002100||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533484.1;locus_tag=L2557_RS02435;product=tRNA adenosine(34) deaminase TadA;protein_id=WP_075673674.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 5590 6225 . - . ID=gene-L2557_RS02440;Name=L2557_RS02440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02440 NZ_JAIKUA010000022.1 Protein Homology CDS 5590 6225 . - 0 ID=cds-WP_075673673.1;Parent=gene-L2557_RS02440;Dbxref=GenBank:WP_075673673.1;Name=WP_075673673.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015366522.1;locus_tag=L2557_RS02440;product=LysE family translocator;protein_id=WP_075673673.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 6703 6963 . + . ID=gene-L2557_RS02445;Name=L2557_RS02445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02445 NZ_JAIKUA010000022.1 Protein Homology CDS 6703 6963 . + 0 ID=cds-WP_075673672.1;Parent=gene-L2557_RS02445;Dbxref=GenBank:WP_075673672.1;Name=WP_075673672.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017373573.1;locus_tag=L2557_RS02445;product=YfhL family 4Fe-4S dicluster ferredoxin;protein_id=WP_075673672.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 7005 7385 . - . ID=gene-L2557_RS02450;Name=acpS;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=L2557_RS02450 NZ_JAIKUA010000022.1 Protein Homology CDS 7005 7385 . - 0 ID=cds-WP_099659373.1;Parent=gene-L2557_RS02450;Dbxref=GenBank:WP_099659373.1;Name=WP_099659373.1;Ontology_term=GO:0008610,GO:0008897;gbkey=CDS;gene=acpS;go_function=holo-[acyl-carrier-protein] synthase activity|0008897||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243887.1;locus_tag=L2557_RS02450;product=holo-ACP synthase;protein_id=WP_099659373.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 7385 8116 . - . ID=gene-L2557_RS02455;Name=pdxJ;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=L2557_RS02455 NZ_JAIKUA010000022.1 Protein Homology CDS 7385 8116 . - 0 ID=cds-WP_159242106.1;Parent=gene-L2557_RS02455;Dbxref=GenBank:WP_159242106.1;Name=WP_159242106.1;Ontology_term=GO:0008615,GO:0033856;gbkey=CDS;gene=pdxJ;go_function=pyridoxine 5'-phosphate synthase activity|0033856||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014728274.1;locus_tag=L2557_RS02455;product=pyridoxine 5'-phosphate synthase;protein_id=WP_159242106.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 8186 8926 . - . ID=gene-L2557_RS02460;Name=recO;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=L2557_RS02460 NZ_JAIKUA010000022.1 Protein Homology CDS 8186 8926 . - 0 ID=cds-WP_075673669.1;Parent=gene-L2557_RS02460;Dbxref=GenBank:WP_075673669.1;Name=WP_075673669.1;Ontology_term=GO:0006281,GO:0006310,GO:0003677;gbkey=CDS;gene=recO;go_function=DNA binding|0003677||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017627957.1;locus_tag=L2557_RS02460;product=DNA repair protein RecO;protein_id=WP_075673669.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 8936 9844 . - . ID=gene-L2557_RS02465;Name=era;gbkey=Gene;gene=era;gene_biotype=protein_coding;locus_tag=L2557_RS02465 NZ_JAIKUA010000022.1 Protein Homology CDS 8936 9844 . - 0 ID=cds-WP_023581601.1;Parent=gene-L2557_RS02465;Dbxref=GenBank:WP_023581601.1;Name=WP_023581601.1;Ontology_term=GO:0003723,GO:0005525;gbkey=CDS;gene=era;go_function=RNA binding|0003723||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002214829.1;locus_tag=L2557_RS02465;product=GTPase Era;protein_id=WP_023581601.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 9841 10521 . - . ID=gene-L2557_RS02470;Name=rnc;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=L2557_RS02470 NZ_JAIKUA010000022.1 Protein Homology CDS 9841 10521 . - 0 ID=cds-WP_075673668.1;Parent=gene-L2557_RS02470;Dbxref=GenBank:WP_075673668.1;Name=WP_075673668.1;Ontology_term=GO:0006364,GO:0006396,GO:0003723,GO:0004525;gbkey=CDS;gene=rnc;go_function=RNA binding|0003723||IEA,ribonuclease III activity|0004525||IEA;go_process=rRNA processing|0006364||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960048.1;locus_tag=L2557_RS02470;product=ribonuclease III;protein_id=WP_075673668.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 10717 11688 . - . ID=gene-L2557_RS02475;Name=lepB;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=L2557_RS02475 NZ_JAIKUA010000022.1 Protein Homology CDS 10717 11688 . - 0 ID=cds-WP_075673667.1;Parent=gene-L2557_RS02475;Dbxref=GenBank:WP_075673667.1;Name=WP_075673667.1;Ontology_term=GO:0006465,GO:0004252;gbkey=CDS;gene=lepB;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=signal peptide processing|0006465||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248458.1;locus_tag=L2557_RS02475;product=signal peptidase I;protein_id=WP_075673667.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 11703 13499 . - . ID=gene-L2557_RS02480;Name=lepA;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=L2557_RS02480 NZ_JAIKUA010000022.1 Protein Homology CDS 11703 13499 . - 0 ID=cds-WP_075673666.1;Parent=gene-L2557_RS02480;Dbxref=GenBank:WP_075673666.1;Name=WP_075673666.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=lepA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_018345454.1;locus_tag=L2557_RS02480;product=translation elongation factor 4;protein_id=WP_075673666.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 13801 14265 . - . ID=gene-L2557_RS02485;Name=rseC;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=L2557_RS02485 NZ_JAIKUA010000022.1 Protein Homology CDS 13801 14265 . - 0 ID=cds-WP_099659371.1;Parent=gene-L2557_RS02485;Dbxref=GenBank:WP_099659371.1;Name=WP_099659371.1;gbkey=CDS;gene=rseC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243895.1;locus_tag=L2557_RS02485;product=SoxR-reducing system protein RseC;protein_id=WP_099659371.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 14279 15247 . - . ID=gene-L2557_RS02490;Name=rseB;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=L2557_RS02490 NZ_JAIKUA010000022.1 Protein Homology CDS 14279 15247 . - 0 ID=cds-WP_075673664.1;Parent=gene-L2557_RS02490;Dbxref=GenBank:WP_075673664.1;Name=WP_075673664.1;gbkey=CDS;gene=rseB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243896.1;locus_tag=L2557_RS02490;product=sigma-E factor regulatory protein RseB;protein_id=WP_075673664.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 15295 15921 . - . ID=gene-L2557_RS02495;Name=rseA;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=L2557_RS02495 NZ_JAIKUA010000022.1 Protein Homology CDS 15295 15921 . - 0 ID=cds-WP_229578322.1;Parent=gene-L2557_RS02495;Dbxref=GenBank:WP_229578322.1;Name=WP_229578322.1;Ontology_term=GO:0016989;gbkey=CDS;gene=rseA;go_function=sigma factor antagonist activity|0016989||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005130332.1;locus_tag=L2557_RS02495;product=anti-sigma-E factor RseA;protein_id=WP_229578322.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 15960 16538 . - . ID=gene-L2557_RS02500;Name=rpoE;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=L2557_RS02500 NZ_JAIKUA010000022.1 Protein Homology CDS 15960 16538 . - 0 ID=cds-WP_006533574.1;Parent=gene-L2557_RS02500;Dbxref=GenBank:WP_006533574.1;Name=WP_006533574.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoE;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533574.1;locus_tag=L2557_RS02500;product=RNA polymerase sigma factor RpoE;protein_id=WP_006533574.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 16834 17589 . - . ID=gene-L2557_RS02505;Name=trmN;gbkey=Gene;gene=trmN;gene_biotype=protein_coding;locus_tag=L2557_RS02505 NZ_JAIKUA010000022.1 Protein Homology CDS 16834 17589 . - 0 ID=cds-WP_075673662.1;Parent=gene-L2557_RS02505;Dbxref=GenBank:WP_075673662.1;Name=WP_075673662.1;Ontology_term=GO:0030488,GO:0003676,GO:0016430;gbkey=CDS;gene=trmN;go_function=nucleic acid binding|0003676||IEA,tRNA (adenine-N6)-methyltransferase activity|0016430||IEA;go_process=tRNA methylation|0030488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368142.1;locus_tag=L2557_RS02505;product=tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN;protein_id=WP_075673662.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 17852 19216 . + . ID=gene-L2557_RS02510;Name=srmB;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=L2557_RS02510 NZ_JAIKUA010000022.1 Protein Homology CDS 17852 19216 . + 0 ID=cds-WP_075673661.1;Parent=gene-L2557_RS02510;Dbxref=GenBank:WP_075673661.1;Name=WP_075673661.1;Ontology_term=GO:0000027,GO:0003724;gbkey=CDS;gene=srmB;go_function=RNA helicase activity|0003724||IEA;go_process=ribosomal large subunit assembly|0000027||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013319018.1;locus_tag=L2557_RS02510;product=ATP-dependent RNA helicase SrmB;protein_id=WP_075673661.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 19388 19771 . - . ID=gene-L2557_RS02515;Name=grcA;gbkey=Gene;gene=grcA;gene_biotype=protein_coding;locus_tag=L2557_RS02515 NZ_JAIKUA010000022.1 Protein Homology CDS 19388 19771 . - 0 ID=cds-WP_023581591.1;Parent=gene-L2557_RS02515;Dbxref=GenBank:WP_023581591.1;Name=WP_023581591.1;Ontology_term=GO:0003824;gbkey=CDS;gene=grcA;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007728348.1;locus_tag=L2557_RS02515;product=autonomous glycyl radical cofactor GrcA;protein_id=WP_023581591.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 20106 20786 . + . ID=gene-L2557_RS02520;Name=ung;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=L2557_RS02520 NZ_JAIKUA010000022.1 Protein Homology CDS 20106 20786 . + 0 ID=cds-WP_075673659.1;Parent=gene-L2557_RS02520;Dbxref=GenBank:WP_075673659.1;Name=WP_075673659.1;Ontology_term=GO:0006284,GO:0004844,GO:0016799;gbkey=CDS;gene=ung;go_function=uracil DNA N-glycosylase activity|0004844||IEA,hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368143.1;locus_tag=L2557_RS02520;product=uracil-DNA glycosylase;protein_id=WP_075673659.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 20904 21515 . - . ID=gene-L2557_RS02525;Name=grpE;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=L2557_RS02525 NZ_JAIKUA010000022.1 Protein Homology CDS 20904 21515 . - 0 ID=cds-WP_075673658.1;Parent=gene-L2557_RS02525;Dbxref=GenBank:WP_075673658.1;Name=WP_075673658.1;Ontology_term=GO:0006457,GO:0000774,GO:0042803,GO:0051087;gbkey=CDS;gene=grpE;go_function=adenyl-nucleotide exchange factor activity|0000774||IEA,protein homodimerization activity|0042803||IEA,protein-folding chaperone binding|0051087||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368144.1;locus_tag=L2557_RS02525;product=nucleotide exchange factor GrpE;protein_id=WP_075673658.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 21616 22515 . + . ID=gene-L2557_RS02530;Name=nadK;gbkey=Gene;gene=nadK;gene_biotype=protein_coding;locus_tag=L2557_RS02530 NZ_JAIKUA010000022.1 Protein Homology CDS 21616 22515 . + 0 ID=cds-WP_083629114.1;Parent=gene-L2557_RS02530;Dbxref=GenBank:WP_083629114.1;Name=WP_083629114.1;Ontology_term=GO:0003951;gbkey=CDS;gene=nadK;go_function=NAD+ kinase activity|0003951||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250495.1;locus_tag=L2557_RS02530;product=NAD(+) kinase;protein_id=WP_083629114.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 22603 24264 . + . ID=gene-L2557_RS02535;Name=recN;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=L2557_RS02535 NZ_JAIKUA010000022.1 Protein Homology CDS 22603 24264 . + 0 ID=cds-WP_083629113.1;Parent=gene-L2557_RS02535;Dbxref=GenBank:WP_083629113.1;Name=WP_083629113.1;Ontology_term=GO:0006281,GO:0006310,GO:0005524;gbkey=CDS;gene=recN;go_function=ATP binding|0005524||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: protein motif:HMM:NF008121.0;locus_tag=L2557_RS02535;product=DNA repair protein RecN;protein_id=WP_083629113.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 24378 24740 . + . ID=gene-L2557_RS02540;Name=bamE;gbkey=Gene;gene=bamE;gene_biotype=protein_coding;locus_tag=L2557_RS02540 NZ_JAIKUA010000022.1 Protein Homology CDS 24378 24740 . + 0 ID=cds-WP_075673657.1;Parent=gene-L2557_RS02540;Dbxref=GenBank:WP_075673657.1;Name=WP_075673657.1;gbkey=CDS;gene=bamE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533585.1;locus_tag=L2557_RS02540;product=outer membrane protein assembly factor BamE;protein_id=WP_075673657.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 24947 25240 . - . ID=gene-L2557_RS02545;Name=L2557_RS02545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02545 NZ_JAIKUA010000022.1 Protein Homology CDS 24947 25240 . - 0 ID=cds-WP_075673656.1;Parent=gene-L2557_RS02545;Dbxref=GenBank:WP_075673656.1;Name=WP_075673656.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248463.1;locus_tag=L2557_RS02545;product=RnfH family protein;protein_id=WP_075673656.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 25233 25667 . - . ID=gene-L2557_RS02550;Name=L2557_RS02550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02550 NZ_JAIKUA010000022.1 Protein Homology CDS 25233 25667 . - 0 ID=cds-WP_006533588.1;Parent=gene-L2557_RS02550;Dbxref=GenBank:WP_006533588.1;Name=WP_006533588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243914.1;locus_tag=L2557_RS02550;product=SRPBCC family protein;protein_id=WP_006533588.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 25824 26306 . + . ID=gene-L2557_RS02555;Name=smpB;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=L2557_RS02555 NZ_JAIKUA010000022.1 Protein Homology CDS 25824 26306 . + 0 ID=cds-WP_075673655.1;Parent=gene-L2557_RS02555;Dbxref=GenBank:WP_075673655.1;Name=WP_075673655.1;Ontology_term=GO:0003723;gbkey=CDS;gene=smpB;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311509.1;locus_tag=L2557_RS02555;product=SsrA-binding protein SmpB;protein_id=WP_075673655.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 26366 26732 . + . ID=gene-L2557_RS02560;Name=ssrA;gbkey=Gene;gene=ssrA;gene_biotype=tmRNA;locus_tag=L2557_RS02560 NZ_JAIKUA010000022.1 cmsearch tmRNA 26366 26732 . + . ID=rna-L2557_RS02560;Parent=gene-L2557_RS02560;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=L2557_RS02560;product=transfer-messenger RNA NZ_JAIKUA010000022.1 cmsearch exon 26366 26732 . + . ID=exon-L2557_RS02560-1;Parent=rna-L2557_RS02560;Dbxref=RFAM:RF00023;gbkey=tmRNA;gene=ssrA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=L2557_RS02560;product=transfer-messenger RNA NZ_JAIKUA010000022.1 RefSeq gene 26911 27264 . + . ID=gene-L2557_RS02565;Name=L2557_RS02565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02565 NZ_JAIKUA010000022.1 GeneMarkS-2+ CDS 26911 27264 . + 0 ID=cds-WP_211838486.1;Parent=gene-L2557_RS02565;Dbxref=GenBank:WP_211838486.1;Name=WP_211838486.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS02565;product=hypothetical protein;protein_id=WP_211838486.1;transl_table=11 NZ_JAIKUA010000022.1 RefSeq gene 27333 27623 . - . ID=gene-L2557_RS02570;Name=L2557_RS02570;end_range=27623,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02570;partial=true NZ_JAIKUA010000022.1 GeneMarkS-2+ CDS 27333 27623 . - 0 ID=cds-WP_235409774.1;Parent=gene-L2557_RS02570;Dbxref=GenBank:WP_235409774.1;Name=WP_235409774.1;end_range=27623,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS02570;partial=true;product=hypothetical protein;protein_id=WP_235409774.1;transl_table=11 ##sequence-region NZ_JAIKUA010000220.1 1 4455 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000220.1 RefSeq region 1 4455 . + . ID=NZ_JAIKUA010000220.1:1..4455;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000220.1 RefSeq gene 217 1422 . + . ID=gene-L2557_RS14065;Name=L2557_RS14065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14065 NZ_JAIKUA010000220.1 Protein Homology CDS 217 1422 . + 0 ID=cds-WP_099660591.1;Parent=gene-L2557_RS14065;Dbxref=GenBank:WP_099660591.1;Name=WP_099660591.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243426.1;locus_tag=L2557_RS14065;product=mechanosensitive ion channel family protein;protein_id=WP_099660591.1;transl_table=11 NZ_JAIKUA010000220.1 RefSeq gene 1645 2352 . + . ID=gene-L2557_RS14070;Name=hda;gbkey=Gene;gene=hda;gene_biotype=protein_coding;locus_tag=L2557_RS14070 NZ_JAIKUA010000220.1 Protein Homology CDS 1645 2352 . + 0 ID=cds-WP_006533048.1;Parent=gene-L2557_RS14070;Dbxref=GenBank:WP_006533048.1;Name=WP_006533048.1;gbkey=CDS;gene=hda;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228401.1;locus_tag=L2557_RS14070;product=DnaA inactivator Hda;protein_id=WP_006533048.1;transl_table=11 NZ_JAIKUA010000220.1 RefSeq gene 2559 3809 . - . ID=gene-L2557_RS14075;Name=L2557_RS14075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14075 NZ_JAIKUA010000220.1 Protein Homology CDS 2559 3809 . - 0 ID=cds-WP_075671894.1;Parent=gene-L2557_RS14075;Dbxref=GenBank:WP_075671894.1;Name=WP_075671894.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248286.1;locus_tag=L2557_RS14075;product=MFS transporter;protein_id=WP_075671894.1;transl_table=11 ##sequence-region NZ_JAIKUA010000221.1 1 7137 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000221.1 RefSeq region 1 7137 . + . ID=NZ_JAIKUA010000221.1:1..7137;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000221.1 RefSeq gene 484 1461 . + . ID=gene-L2557_RS14080;Name=epmA;gbkey=Gene;gene=epmA;gene_biotype=protein_coding;locus_tag=L2557_RS14080 NZ_JAIKUA010000221.1 Protein Homology CDS 484 1461 . + 0 ID=cds-WP_098941260.1;Parent=gene-L2557_RS14080;Dbxref=GenBank:WP_098941260.1;Name=WP_098941260.1;Ontology_term=GO:0006418,GO:0004812;gbkey=CDS;gene=epmA;go_function=aminoacyl-tRNA ligase activity|0004812||IEA;go_process=tRNA aminoacylation for protein translation|0006418||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463208.1;locus_tag=L2557_RS14080;product=elongation factor P--(R)-beta-lysine ligase;protein_id=WP_098941260.1;transl_table=11 NZ_JAIKUA010000221.1 RefSeq gene 1507 1920 . - . ID=gene-L2557_RS14085;Name=L2557_RS14085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14085 NZ_JAIKUA010000221.1 GeneMarkS-2+ CDS 1507 1920 . - 0 ID=cds-WP_075672951.1;Parent=gene-L2557_RS14085;Dbxref=GenBank:WP_075672951.1;Name=WP_075672951.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS14085;product=hypothetical protein;protein_id=WP_075672951.1;transl_table=11 NZ_JAIKUA010000221.1 RefSeq gene 1917 2459 . - . ID=gene-L2557_RS14090;Name=L2557_RS14090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14090 NZ_JAIKUA010000221.1 Protein Homology CDS 1917 2459 . - 0 ID=cds-WP_099660035.1;Parent=gene-L2557_RS14090;Dbxref=GenBank:WP_099660035.1;Name=WP_099660035.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815691.1;locus_tag=L2557_RS14090;product=LemA family protein;protein_id=WP_099660035.1;transl_table=11 NZ_JAIKUA010000221.1 RefSeq gene 2468 3541 . - . ID=gene-L2557_RS14095;Name=L2557_RS14095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14095 NZ_JAIKUA010000221.1 Protein Homology CDS 2468 3541 . - 0 ID=cds-WP_156733009.1;Parent=gene-L2557_RS14095;Dbxref=GenBank:WP_156733009.1;Name=WP_156733009.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004905361.1;locus_tag=L2557_RS14095;product=hypothetical protein;protein_id=WP_156733009.1;transl_table=11 NZ_JAIKUA010000221.1 RefSeq gene 3593 4150 . - . ID=gene-L2557_RS14100;Name=L2557_RS14100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14100 NZ_JAIKUA010000221.1 Protein Homology CDS 3593 4150 . - 0 ID=cds-WP_075672954.1;Parent=gene-L2557_RS14100;Dbxref=GenBank:WP_075672954.1;Name=WP_075672954.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535428.1;locus_tag=L2557_RS14100;product=LemA family protein;protein_id=WP_075672954.1;transl_table=11 NZ_JAIKUA010000221.1 RefSeq gene 4409 5488 . - . ID=gene-L2557_RS14105;Name=glpQ;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=L2557_RS14105 NZ_JAIKUA010000221.1 Protein Homology CDS 4409 5488 . - 0 ID=cds-WP_075672955.1;Parent=gene-L2557_RS14105;Dbxref=GenBank:WP_075672955.1;Name=WP_075672955.1;Ontology_term=GO:0006629,GO:0008081;gbkey=CDS;gene=glpQ;go_function=phosphoric diester hydrolase activity|0008081||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248870.1;locus_tag=L2557_RS14105;product=glycerophosphodiester phosphodiesterase;protein_id=WP_075672955.1;transl_table=11 NZ_JAIKUA010000221.1 RefSeq gene 5624 6976 . - . ID=gene-L2557_RS14110;Name=glpT;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=L2557_RS14110 NZ_JAIKUA010000221.1 Protein Homology CDS 5624 6976 . - 0 ID=cds-WP_099660034.1;Parent=gene-L2557_RS14110;Dbxref=GenBank:WP_099660034.1;Name=WP_099660034.1;Ontology_term=GO:0015794,GO:0015169,GO:0016020;gbkey=CDS;gene=glpT;go_component=membrane|0016020||IEA;go_function=glycerol-3-phosphate transmembrane transporter activity|0015169||IEA;go_process=glycerol-3-phosphate transmembrane transport|0015794||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827250.1;locus_tag=L2557_RS14110;product=glycerol-3-phosphate transporter;protein_id=WP_099660034.1;transl_table=11 ##sequence-region NZ_JAIKUA010000222.1 1 8226 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000222.1 RefSeq region 1 8226 . + . ID=NZ_JAIKUA010000222.1:1..8226;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000222.1 RefSeq gene 95 961 . - . ID=gene-L2557_RS14115;Name=murI;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=L2557_RS14115 NZ_JAIKUA010000222.1 Protein Homology CDS 95 961 . - 0 ID=cds-WP_099659456.1;Parent=gene-L2557_RS14115;Dbxref=GenBank:WP_099659456.1;Name=WP_099659456.1;Ontology_term=GO:0008152,GO:0008881;gbkey=CDS;gene=murI;go_function=glutamate racemase activity|0008881||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368686.1;locus_tag=L2557_RS14115;product=glutamate racemase;protein_id=WP_099659456.1;transl_table=11 NZ_JAIKUA010000222.1 RefSeq gene 906 2807 . - . ID=gene-L2557_RS14120;Name=btuB;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=L2557_RS14120 NZ_JAIKUA010000222.1 Protein Homology CDS 906 2807 . - 0 ID=cds-WP_235410140.1;Parent=gene-L2557_RS14120;Dbxref=GenBank:WP_235410140.1;Name=WP_235410140.1;Ontology_term=GO:0015889,GO:0015420;gbkey=CDS;gene=btuB;go_function=ABC-type vitamin B12 transporter activity|0015420||IEA;go_process=cobalamin transport|0015889||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148803.1;locus_tag=L2557_RS14120;product=TonB-dependent vitamin B12 receptor BtuB;protein_id=WP_235410140.1;transl_table=11 NZ_JAIKUA010000222.1 cmsearch riboswitch 2877 3083 . - . ID=id-NZ_JAIKUA010000222.1:2877..3083;Dbxref=RFAM:RF00174;Note=cobalamin riboswitch;bound_moiety=adenosylcobalamin;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAIKUA010000222.1 RefSeq gene 3197 4294 . + . ID=gene-L2557_RS14125;Name=trmA;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=L2557_RS14125 NZ_JAIKUA010000222.1 Protein Homology CDS 3197 4294 . + 0 ID=cds-WP_075672970.1;Parent=gene-L2557_RS14125;Dbxref=GenBank:WP_075672970.1;Name=WP_075672970.1;Ontology_term=GO:0006396,GO:0030697;gbkey=CDS;gene=trmA;go_function=tRNA (uracil(54)-C5)-methyltransferase activity%2C S-adenosyl methionine-dependent|0030697||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249698.1;locus_tag=L2557_RS14125;product=tRNA (uridine(54)-C5)-methyltransferase TrmA;protein_id=WP_075672970.1;transl_table=11 NZ_JAIKUA010000222.1 RefSeq gene 4418 4819 . - . ID=gene-L2557_RS14130;Name=L2557_RS14130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14130 NZ_JAIKUA010000222.1 Protein Homology CDS 4418 4819 . - 0 ID=cds-WP_075672971.1;Parent=gene-L2557_RS14130;Dbxref=GenBank:WP_075672971.1;Name=WP_075672971.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249699.1;locus_tag=L2557_RS14130;product=YijD family membrane protein;protein_id=WP_075672971.1;transl_table=11 NZ_JAIKUA010000222.1 RefSeq gene 4819 5505 . - . ID=gene-L2557_RS14135;Name=fabR;gbkey=Gene;gene=fabR;gene_biotype=protein_coding;locus_tag=L2557_RS14135 NZ_JAIKUA010000222.1 Protein Homology CDS 4819 5505 . - 0 ID=cds-WP_069366914.1;Parent=gene-L2557_RS14135;Dbxref=GenBank:WP_069366914.1;Name=WP_069366914.1;Ontology_term=GO:0003677;gbkey=CDS;gene=fabR;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628674.1;locus_tag=L2557_RS14135;product=HTH-type transcriptional repressor FabR;protein_id=WP_069366914.1;transl_table=11 NZ_JAIKUA010000222.1 RefSeq gene 5705 7102 . + . ID=gene-L2557_RS14140;Name=sthA;gbkey=Gene;gene=sthA;gene_biotype=protein_coding;locus_tag=L2557_RS14140 NZ_JAIKUA010000222.1 Protein Homology CDS 5705 7102 . + 0 ID=cds-WP_069366816.1;Parent=gene-L2557_RS14140;Dbxref=GenBank:WP_069366816.1;Name=WP_069366816.1;Ontology_term=GO:0045454,GO:0003957,GO:0050660;gbkey=CDS;gene=sthA;go_function=NAD(P)+ transhydrogenase (Si-specific) activity|0003957||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=cell redox homeostasis|0045454||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148807.1;locus_tag=L2557_RS14140;product=Si-specific NAD(P)(+) transhydrogenase;protein_id=WP_069366816.1;transl_table=11 NZ_JAIKUA010000222.1 RefSeq gene 7094 8011 . - . ID=gene-L2557_RS14145;Name=oxyR;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=L2557_RS14145 NZ_JAIKUA010000222.1 Protein Homology CDS 7094 8011 . - 0 ID=cds-WP_075672972.1;Parent=gene-L2557_RS14145;Dbxref=GenBank:WP_075672972.1;Name=WP_075672972.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=oxyR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249700.1;locus_tag=L2557_RS14145;product=DNA-binding transcriptional regulator OxyR;protein_id=WP_075672972.1;transl_table=11 ##sequence-region NZ_JAIKUA010000223.1 1 7974 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000223.1 RefSeq region 1 7974 . + . ID=NZ_JAIKUA010000223.1:1..7974;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000223.1 RefSeq gene 290 2014 . + . ID=gene-L2557_RS14150;Name=poxB;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=L2557_RS14150 NZ_JAIKUA010000223.1 Protein Homology CDS 290 2014 . + 0 ID=cds-WP_223674003.1;Parent=gene-L2557_RS14150;Dbxref=GenBank:WP_223674003.1;Name=WP_223674003.1;Ontology_term=GO:0006090,GO:0000287,GO:0030976,GO:0052737;gbkey=CDS;gene=poxB;go_function=magnesium ion binding|0000287||IEA,thiamine pyrophosphate binding|0030976||IEA,pyruvate dehydrogenase (quinone) activity|0052737||IEA;go_process=pyruvate metabolic process|0006090||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827020.1;locus_tag=L2557_RS14150;product=ubiquinone-dependent pyruvate dehydrogenase;protein_id=WP_223674003.1;transl_table=11 NZ_JAIKUA010000223.1 RefSeq gene 2109 3272 . - . ID=gene-L2557_RS14155;Name=argE;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=L2557_RS14155 NZ_JAIKUA010000223.1 Protein Homology CDS 2109 3272 . - 0 ID=cds-WP_075672977.1;Parent=gene-L2557_RS14155;Dbxref=GenBank:WP_075672977.1;Name=WP_075672977.1;Ontology_term=GO:0006526,GO:0019213;gbkey=CDS;gene=argE;go_function=deacetylase activity|0019213||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246390.1;locus_tag=L2557_RS14155;product=acetylornithine deacetylase;protein_id=WP_075672977.1;transl_table=11 NZ_JAIKUA010000223.1 RefSeq gene 3373 4377 . + . ID=gene-L2557_RS14160;Name=argC;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=L2557_RS14160 NZ_JAIKUA010000223.1 Protein Homology CDS 3373 4377 . + 0 ID=cds-WP_099659460.1;Parent=gene-L2557_RS14160;Dbxref=GenBank:WP_099659460.1;Name=WP_099659460.1;Ontology_term=GO:0006526,GO:0006592,GO:0003942,GO:0070401;gbkey=CDS;gene=argC;go_function=N-acetyl-gamma-glutamyl-phosphate reductase activity|0003942||IEA,NADP+ binding|0070401||IEA;go_process=L-arginine biosynthetic process|0006526||IEA,ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005278246.1;locus_tag=L2557_RS14160;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=WP_099659460.1;transl_table=11 NZ_JAIKUA010000223.1 RefSeq gene 4398 5171 . + . ID=gene-L2557_RS14165;Name=argB;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=L2557_RS14165 NZ_JAIKUA010000223.1 Protein Homology CDS 4398 5171 . + 0 ID=cds-WP_098941434.1;Parent=gene-L2557_RS14165;Dbxref=GenBank:WP_098941434.1;Name=WP_098941434.1;Ontology_term=GO:0006592,GO:0003991,GO:0005737;gbkey=CDS;gene=argB;go_component=cytoplasm|0005737||IEA;go_function=acetylglutamate kinase activity|0003991||IEA;go_process=ornithine biosynthetic process|0006592||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148811.1;locus_tag=L2557_RS14165;product=acetylglutamate kinase;protein_id=WP_098941434.1;transl_table=11 NZ_JAIKUA010000223.1 RefSeq gene 5247 6455 . + . ID=gene-L2557_RS14170;Name=L2557_RS14170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14170 NZ_JAIKUA010000223.1 Protein Homology CDS 5247 6455 . + 0 ID=cds-WP_075672974.1;Parent=gene-L2557_RS14170;Dbxref=GenBank:WP_075672974.1;Name=WP_075672974.1;Ontology_term=GO:0006526,GO:0004055,GO:0005524;gbkey=CDS;go_function=argininosuccinate synthase activity|0004055||IEA,ATP binding|0005524||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246387.1;locus_tag=L2557_RS14170;product=argininosuccinate synthase;protein_id=WP_075672974.1;transl_table=11 NZ_JAIKUA010000223.1 RefSeq gene 6532 7914 . + . ID=gene-L2557_RS14175;Name=argH;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=L2557_RS14175 NZ_JAIKUA010000223.1 Protein Homology CDS 6532 7914 . + 0 ID=cds-WP_075672973.1;Parent=gene-L2557_RS14175;Dbxref=GenBank:WP_075672973.1;Name=WP_075672973.1;Ontology_term=GO:0042450,GO:0004056;gbkey=CDS;gene=argH;go_function=argininosuccinate lyase activity|0004056||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246386.1;locus_tag=L2557_RS14175;product=argininosuccinate lyase;protein_id=WP_075672973.1;transl_table=11 ##sequence-region NZ_JAIKUA010000224.1 1 1459 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000224.1 RefSeq region 1 1459 . + . ID=NZ_JAIKUA010000224.1:1..1459;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000224.1 RefSeq gene 60 305 . - . ID=gene-L2557_RS14180;Name=L2557_RS14180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14180 NZ_JAIKUA010000224.1 Protein Homology CDS 60 305 . - 0 ID=cds-WP_075672619.1;Parent=gene-L2557_RS14180;Dbxref=GenBank:WP_075672619.1;Name=WP_075672619.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247919.1;locus_tag=L2557_RS14180;product=hypothetical protein;protein_id=WP_075672619.1;transl_table=11 NZ_JAIKUA010000224.1 RefSeq gene 349 738 . - . ID=gene-L2557_RS14185;Name=L2557_RS14185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14185 NZ_JAIKUA010000224.1 GeneMarkS-2+ CDS 349 738 . - 0 ID=cds-WP_143484138.1;Parent=gene-L2557_RS14185;Dbxref=GenBank:WP_143484138.1;Name=WP_143484138.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS14185;product=hypothetical protein;protein_id=WP_143484138.1;transl_table=11 NZ_JAIKUA010000224.1 RefSeq gene 1086 1367 . - . ID=gene-L2557_RS14190;Name=L2557_RS14190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14190 NZ_JAIKUA010000224.1 Protein Homology CDS 1086 1367 . - 0 ID=cds-WP_075672621.1;Parent=gene-L2557_RS14190;Dbxref=GenBank:WP_075672621.1;Name=WP_075672621.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242536.1;locus_tag=L2557_RS14190;product=DUF5339 domain-containing protein;protein_id=WP_075672621.1;transl_table=11 ##sequence-region NZ_JAIKUA010000225.1 1 6404 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000225.1 RefSeq region 1 6404 . + . ID=NZ_JAIKUA010000225.1:1..6404;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000225.1 RefSeq gene 86 571 . - . ID=gene-L2557_RS14195;Name=L2557_RS14195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14195 NZ_JAIKUA010000225.1 Protein Homology CDS 86 571 . - 0 ID=cds-WP_075673649.1;Parent=gene-L2557_RS14195;Dbxref=GenBank:WP_075673649.1;Name=WP_075673649.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536736.1;locus_tag=L2557_RS14195;product=GNAT family N-acetyltransferase;protein_id=WP_075673649.1;transl_table=11 NZ_JAIKUA010000225.1 RefSeq gene 715 1824 . + . ID=gene-L2557_RS14200;Name=L2557_RS14200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14200 NZ_JAIKUA010000225.1 Protein Homology CDS 715 1824 . + 0 ID=cds-WP_159364007.1;Parent=gene-L2557_RS14200;Dbxref=GenBank:WP_159364007.1;Name=WP_159364007.1;Ontology_term=GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917668.1;locus_tag=L2557_RS14200;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=WP_159364007.1;transl_table=11 NZ_JAIKUA010000225.1 RefSeq gene 1818 2699 . + . ID=gene-L2557_RS14205;Name=L2557_RS14205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14205 NZ_JAIKUA010000225.1 Protein Homology CDS 1818 2699 . + 0 ID=cds-WP_075673628.1;Parent=gene-L2557_RS14205;Dbxref=GenBank:WP_075673628.1;Name=WP_075673628.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004917666.1;locus_tag=L2557_RS14205;product=phosphatase PAP2 family protein;protein_id=WP_075673628.1;transl_table=11 NZ_JAIKUA010000225.1 RefSeq gene 2683 5196 . + . ID=gene-L2557_RS14210;Name=L2557_RS14210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14210 NZ_JAIKUA010000225.1 Protein Homology CDS 2683 5196 . + 0 ID=cds-WP_099660382.1;Parent=gene-L2557_RS14210;Dbxref=GenBank:WP_099660382.1;Name=WP_099660382.1;Ontology_term=GO:0016310,GO:0005524,GO:0016301;gbkey=CDS;go_function=ATP binding|0005524||IEA,kinase activity|0016301||IEA;go_process=phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657727.1;locus_tag=L2557_RS14210;product=PEP/pyruvate-binding domain-containing protein;protein_id=WP_099660382.1;transl_table=11 NZ_JAIKUA010000225.1 RefSeq gene 5272 5763 . - . ID=gene-L2557_RS14215;Name=L2557_RS14215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14215 NZ_JAIKUA010000225.1 GeneMarkS-2+ CDS 5272 5763 . - 0 ID=cds-WP_075673630.1;Parent=gene-L2557_RS14215;Dbxref=GenBank:WP_075673630.1;Name=WP_075673630.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS14215;product=hypothetical protein;protein_id=WP_075673630.1;transl_table=11 NZ_JAIKUA010000225.1 RefSeq gene 6039 6404 . + . ID=gene-L2557_RS14220;Name=L2557_RS14220;end_range=6404,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14220;partial=true NZ_JAIKUA010000225.1 Protein Homology CDS 6039 6404 . + 0 ID=cds-WP_235410141.1;Parent=gene-L2557_RS14220;Dbxref=GenBank:WP_235410141.1;Name=WP_235410141.1;end_range=6404,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536734.1;locus_tag=L2557_RS14220;partial=true;product=CatA-like O-acetyltransferase;protein_id=WP_235410141.1;transl_table=11 ##sequence-region NZ_JAIKUA010000226.1 1 10467 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000226.1 RefSeq region 1 10467 . + . ID=NZ_JAIKUA010000226.1:1..10467;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000226.1 RefSeq gene 1 420 . - . ID=gene-L2557_RS14225;Name=L2557_RS14225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14225;partial=true;start_range=.,1 NZ_JAIKUA010000226.1 GeneMarkS-2+ CDS 1 420 . - 0 ID=cds-WP_235410142.1;Parent=gene-L2557_RS14225;Dbxref=GenBank:WP_235410142.1;Name=WP_235410142.1;Ontology_term=GO:0006412,GO:0003735;gbkey=CDS;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS14225;partial=true;product=bL17 family ribosomal protein;protein_id=WP_235410142.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000226.1 RefSeq gene 635 865 . + . ID=gene-L2557_RS14230;Name=L2557_RS14230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14230 NZ_JAIKUA010000226.1 GeneMarkS-2+ CDS 635 865 . + 0 ID=cds-WP_099660428.1;Parent=gene-L2557_RS14230;Dbxref=GenBank:WP_099660428.1;Name=WP_099660428.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS14230;product=MFS transporter;protein_id=WP_099660428.1;transl_table=11 NZ_JAIKUA010000226.1 RefSeq gene 938 1534 . - . ID=gene-L2557_RS14235;Name=L2557_RS14235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14235 NZ_JAIKUA010000226.1 Protein Homology CDS 938 1534 . - 0 ID=cds-WP_099660427.1;Parent=gene-L2557_RS14235;Dbxref=GenBank:WP_099660427.1;Name=WP_099660427.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536829.1;locus_tag=L2557_RS14235;product=TetR/AcrR family transcriptional regulator;protein_id=WP_099660427.1;transl_table=11 NZ_JAIKUA010000226.1 RefSeq gene 1687 3189 . + . ID=gene-L2557_RS14240;Name=L2557_RS14240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14240 NZ_JAIKUA010000226.1 Protein Homology CDS 1687 3189 . + 0 ID=cds-WP_075672850.1;Parent=gene-L2557_RS14240;Dbxref=GenBank:WP_075672850.1;Name=WP_075672850.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251198.1;locus_tag=L2557_RS14240;product=MFS transporter;protein_id=WP_075672850.1;transl_table=11 NZ_JAIKUA010000226.1 RefSeq gene 3194 4081 . - . ID=gene-L2557_RS14245;Name=L2557_RS14245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14245 NZ_JAIKUA010000226.1 Protein Homology CDS 3194 4081 . - 0 ID=cds-WP_196576470.1;Parent=gene-L2557_RS14245;Dbxref=GenBank:WP_196576470.1;Name=WP_196576470.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242940.1;locus_tag=L2557_RS14245;product=LysR family transcriptional regulator;protein_id=WP_196576470.1;transl_table=11 NZ_JAIKUA010000226.1 RefSeq gene 4160 5122 . - . ID=gene-L2557_RS14250;Name=accA;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=L2557_RS14250 NZ_JAIKUA010000226.1 Protein Homology CDS 4160 5122 . - 0 ID=cds-WP_088495584.1;Parent=gene-L2557_RS14250;Dbxref=GenBank:WP_088495584.1;Name=WP_088495584.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accA;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019455765.1;locus_tag=L2557_RS14250;product=acetyl-CoA carboxylase carboxyl transferase subunit alpha;protein_id=WP_088495584.1;transl_table=11 NZ_JAIKUA010000226.1 RefSeq gene 5425 6612 . + . ID=gene-L2557_RS14255;Name=ydeE;gbkey=Gene;gene=ydeE;gene_biotype=protein_coding;locus_tag=L2557_RS14255 NZ_JAIKUA010000226.1 Protein Homology CDS 5425 6612 . + 0 ID=cds-WP_099660426.1;Parent=gene-L2557_RS14255;Dbxref=GenBank:WP_099660426.1;Name=WP_099660426.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=ydeE;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661751.1;locus_tag=L2557_RS14255;product=efflux MFS transporter YdeE;protein_id=WP_099660426.1;transl_table=11 NZ_JAIKUA010000226.1 RefSeq gene 6723 7259 . - . ID=gene-L2557_RS14260;Name=L2557_RS14260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14260 NZ_JAIKUA010000226.1 Protein Homology CDS 6723 7259 . - 0 ID=cds-WP_156733410.1;Parent=gene-L2557_RS14260;Dbxref=GenBank:WP_156733410.1;Name=WP_156733410.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536822.1;locus_tag=L2557_RS14260;product=metallophosphoesterase;protein_id=WP_156733410.1;transl_table=11 NZ_JAIKUA010000226.1 RefSeq gene 7392 8237 . - . ID=gene-L2557_RS14265;Name=L2557_RS14265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14265 NZ_JAIKUA010000226.1 Protein Homology CDS 7392 8237 . - 0 ID=cds-WP_099660425.1;Parent=gene-L2557_RS14265;Dbxref=GenBank:WP_099660425.1;Name=WP_099660425.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242935.1;locus_tag=L2557_RS14265;product=helix-turn-helix domain-containing protein;protein_id=WP_099660425.1;transl_table=11 NZ_JAIKUA010000226.1 RefSeq gene 8459 9016 . + . ID=gene-L2557_RS14270;Name=L2557_RS14270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14270 NZ_JAIKUA010000226.1 Protein Homology CDS 8459 9016 . + 0 ID=cds-WP_223673639.1;Parent=gene-L2557_RS14270;Dbxref=GenBank:WP_223673639.1;Name=WP_223673639.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536819.1;locus_tag=L2557_RS14270;product=GNAT family N-acetyltransferase;protein_id=WP_223673639.1;transl_table=11 NZ_JAIKUA010000226.1 RefSeq gene 9082 10365 . - . ID=gene-L2557_RS14275;Name=L2557_RS14275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14275 NZ_JAIKUA010000226.1 Protein Homology CDS 9082 10365 . - 0 ID=cds-WP_099660423.1;Parent=gene-L2557_RS14275;Dbxref=GenBank:WP_099660423.1;Name=WP_099660423.1;Ontology_term=GO:0019346,GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010254007.1;locus_tag=L2557_RS14275;product=cystathionine gamma-synthase family protein;protein_id=WP_099660423.1;transl_table=11 ##sequence-region NZ_JAIKUA010000227.1 1 3469 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000227.1 RefSeq region 1 3469 . + . ID=NZ_JAIKUA010000227.1:1..3469;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000227.1 RefSeq gene 1 234 . - . ID=gene-L2557_RS14280;Name=L2557_RS14280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14280;partial=true;start_range=.,1 NZ_JAIKUA010000227.1 Protein Homology CDS 1 234 . - 0 ID=cds-WP_235410143.1;Parent=gene-L2557_RS14280;Dbxref=GenBank:WP_235410143.1;Name=WP_235410143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661532.1;locus_tag=L2557_RS14280;partial=true;product=hypothetical protein;protein_id=WP_235410143.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000227.1 RefSeq gene 361 516 . - . ID=gene-L2557_RS14285;Name=L2557_RS14285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14285 NZ_JAIKUA010000227.1 Protein Homology CDS 361 516 . - 0 ID=cds-WP_164530190.1;Parent=gene-L2557_RS14285;Dbxref=GenBank:WP_164530190.1;Name=WP_164530190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537179.1;locus_tag=L2557_RS14285;product=hypothetical protein;protein_id=WP_164530190.1;transl_table=11 NZ_JAIKUA010000227.1 RefSeq gene 1054 1194 . - . ID=gene-L2557_RS14290;Name=L2557_RS14290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14290 NZ_JAIKUA010000227.1 GeneMarkS-2+ CDS 1054 1194 . - 0 ID=cds-WP_157954970.1;Parent=gene-L2557_RS14290;Dbxref=GenBank:WP_157954970.1;Name=WP_157954970.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS14290;product=hypothetical protein;protein_id=WP_157954970.1;transl_table=11 NZ_JAIKUA010000227.1 RefSeq gene 1321 1512 . + . ID=gene-L2557_RS14295;Name=L2557_RS14295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14295 NZ_JAIKUA010000227.1 Protein Homology CDS 1321 1512 . + 0 ID=cds-WP_004242485.1;Parent=gene-L2557_RS14295;Dbxref=GenBank:WP_004242485.1;Name=WP_004242485.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242485.1;locus_tag=L2557_RS14295;product=YqaE/Pmp3 family membrane protein;protein_id=WP_004242485.1;transl_table=11 NZ_JAIKUA010000227.1 RefSeq pseudogene 1727 2064 . - . ID=gene-L2557_RS14300;Name=L2557_RS14300;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS14300;pseudo=true NZ_JAIKUA010000227.1 Protein Homology CDS 1727 2064 . - 0 ID=cds-L2557_RS14300;Parent=gene-L2557_RS14300;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242468.1;locus_tag=L2557_RS14300;product=HNH endonuclease;pseudo=true;transl_table=11 NZ_JAIKUA010000227.1 RefSeq gene 2908 3291 . - . ID=gene-L2557_RS14305;Name=L2557_RS14305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14305 NZ_JAIKUA010000227.1 Protein Homology CDS 2908 3291 . - 0 ID=cds-WP_075672627.1;Parent=gene-L2557_RS14305;Dbxref=GenBank:WP_075672627.1;Name=WP_075672627.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF033674.1;locus_tag=L2557_RS14305;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_075672627.1;transl_table=11 ##sequence-region NZ_JAIKUA010000228.1 1 9874 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000228.1 RefSeq region 1 9874 . + . ID=NZ_JAIKUA010000228.1:1..9874;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000228.1 RefSeq gene 44 727 . - . ID=gene-L2557_RS14310;Name=bioD;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=L2557_RS14310 NZ_JAIKUA010000228.1 Protein Homology CDS 44 727 . - 0 ID=cds-WP_109402252.1;Parent=gene-L2557_RS14310;Dbxref=GenBank:WP_109402252.1;Name=WP_109402252.1;Ontology_term=GO:0009102,GO:0000287,GO:0004141,GO:0005524;gbkey=CDS;gene=bioD;go_function=magnesium ion binding|0000287||IEA,dethiobiotin synthase activity|0004141||IEA,ATP binding|0005524||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537597.1;locus_tag=L2557_RS14310;product=dethiobiotin synthase;protein_id=WP_109402252.1;transl_table=11 NZ_JAIKUA010000228.1 RefSeq gene 720 1484 . - . ID=gene-L2557_RS14315;Name=bioC;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=L2557_RS14315 NZ_JAIKUA010000228.1 Protein Homology CDS 720 1484 . - 0 ID=cds-WP_075672745.1;Parent=gene-L2557_RS14315;Dbxref=GenBank:WP_075672745.1;Name=WP_075672745.1;Ontology_term=GO:0009102,GO:0010340;gbkey=CDS;gene=bioC;go_function=carboxyl-O-methyltransferase activity|0010340||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628466.1;locus_tag=L2557_RS14315;product=malonyl-ACP O-methyltransferase BioC;protein_id=WP_075672745.1;transl_table=11 NZ_JAIKUA010000228.1 RefSeq gene 1459 2622 . - . ID=gene-L2557_RS14320;Name=bioF;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=L2557_RS14320 NZ_JAIKUA010000228.1 Protein Homology CDS 1459 2622 . - 0 ID=cds-WP_156733121.1;Parent=gene-L2557_RS14320;Dbxref=GenBank:WP_156733121.1;Name=WP_156733121.1;Ontology_term=GO:0009102,GO:0008710;gbkey=CDS;gene=bioF;go_function=8-amino-7-oxononanoate synthase activity|0008710||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247564.1;locus_tag=L2557_RS14320;product=8-amino-7-oxononanoate synthase;protein_id=WP_156733121.1;transl_table=11 NZ_JAIKUA010000228.1 RefSeq gene 2622 3659 . - . ID=gene-L2557_RS14325;Name=bioB;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=L2557_RS14325 NZ_JAIKUA010000228.1 Protein Homology CDS 2622 3659 . - 0 ID=cds-WP_075672743.1;Parent=gene-L2557_RS14325;Dbxref=GenBank:WP_075672743.1;Name=WP_075672743.1;Ontology_term=GO:0009102,GO:0004076,GO:0051536,GO:1904047;gbkey=CDS;gene=bioB;go_function=biotin synthase activity|0004076||IEA,iron-sulfur cluster binding|0051536||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244460.1;locus_tag=L2557_RS14325;product=biotin synthase BioB;protein_id=WP_075672743.1;transl_table=11 NZ_JAIKUA010000228.1 RefSeq gene 3763 5037 . + . ID=gene-L2557_RS14330;Name=bioA;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=L2557_RS14330 NZ_JAIKUA010000228.1 Protein Homology CDS 3763 5037 . + 0 ID=cds-WP_075672742.1;Parent=gene-L2557_RS14330;Dbxref=GenBank:WP_075672742.1;Name=WP_075672742.1;Ontology_term=GO:0009102,GO:0004015,GO:0030170;gbkey=CDS;gene=bioA;go_function=adenosylmethionine-8-amino-7-oxononanoate transaminase activity|0004015||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biotin biosynthetic process|0009102||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244458.1;locus_tag=L2557_RS14330;product=adenosylmethionine--8-amino-7-oxononanoate transaminase;protein_id=WP_075672742.1;transl_table=11 NZ_JAIKUA010000228.1 RefSeq gene 5114 6103 . - . ID=gene-L2557_RS14335;Name=pgl;gbkey=Gene;gene=pgl;gene_biotype=protein_coding;gene_synonym=ybhE;locus_tag=L2557_RS14335 NZ_JAIKUA010000228.1 Protein Homology CDS 5114 6103 . - 0 ID=cds-WP_099659813.1;Parent=gene-L2557_RS14335;Dbxref=GenBank:WP_099659813.1;Name=WP_099659813.1;Ontology_term=GO:0017057;gbkey=CDS;gene=pgl;go_function=6-phosphogluconolactonase activity|0017057||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537604.1;locus_tag=L2557_RS14335;product=6-phosphogluconolactonase;protein_id=WP_099659813.1;transl_table=11 NZ_JAIKUA010000228.1 RefSeq gene 6253 7074 . + . ID=gene-L2557_RS14340;Name=L2557_RS14340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14340 NZ_JAIKUA010000228.1 Protein Homology CDS 6253 7074 . + 0 ID=cds-WP_075672740.1;Parent=gene-L2557_RS14340;Dbxref=GenBank:WP_075672740.1;Name=WP_075672740.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252155.1;locus_tag=L2557_RS14340;product=pyridoxal phosphatase;protein_id=WP_075672740.1;transl_table=11 NZ_JAIKUA010000228.1 RefSeq gene 7157 8221 . - . ID=gene-L2557_RS14345;Name=modC;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=L2557_RS14345 NZ_JAIKUA010000228.1 Protein Homology CDS 7157 8221 . - 0 ID=cds-WP_075672739.1;Parent=gene-L2557_RS14345;Dbxref=GenBank:WP_075672739.1;Name=WP_075672739.1;Ontology_term=GO:0015689,GO:0005524,GO:0015098,GO:0016020;gbkey=CDS;gene=modC;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537606.1;locus_tag=L2557_RS14345;product=molybdenum ABC transporter ATP-binding protein ModC;protein_id=WP_075672739.1;transl_table=11 NZ_JAIKUA010000228.1 RefSeq gene 8215 8907 . - . ID=gene-L2557_RS14350;Name=modB;gbkey=Gene;gene=modB;gene_biotype=protein_coding;locus_tag=L2557_RS14350 NZ_JAIKUA010000228.1 Protein Homology CDS 8215 8907 . - 0 ID=cds-WP_075672738.1;Parent=gene-L2557_RS14350;Dbxref=GenBank:WP_075672738.1;Name=WP_075672738.1;Ontology_term=GO:0015689,GO:0015098,GO:0016020;gbkey=CDS;gene=modB;go_component=membrane|0016020||IEA;go_function=molybdate ion transmembrane transporter activity|0015098||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537607.1;locus_tag=L2557_RS14350;product=molybdate ABC transporter permease subunit;protein_id=WP_075672738.1;transl_table=11 NZ_JAIKUA010000228.1 RefSeq gene 8925 9695 . - . ID=gene-L2557_RS14355;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=L2557_RS14355 NZ_JAIKUA010000228.1 Protein Homology CDS 8925 9695 . - 0 ID=cds-WP_075672737.1;Parent=gene-L2557_RS14355;Dbxref=GenBank:WP_075672737.1;Name=WP_075672737.1;Ontology_term=GO:0015689;gbkey=CDS;gene=modA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252163.1;locus_tag=L2557_RS14355;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_075672737.1;transl_table=11 ##sequence-region NZ_JAIKUA010000229.1 1 16791 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000229.1 RefSeq region 1 16791 . + . ID=NZ_JAIKUA010000229.1:1..16791;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000229.1 RefSeq pseudogene 228 341 . - . ID=gene-L2557_RS14360;Name=L2557_RS14360;end_range=341,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS14360;partial=true;pseudo=true;start_range=.,228 NZ_JAIKUA010000229.1 Protein Homology CDS 228 341 . - 0 ID=cds-L2557_RS14360;Parent=gene-L2557_RS14360;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0006355,GO:0003677;end_range=341,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004239290.1;locus_tag=L2557_RS14360;partial=true;product=helix-turn-helix domain-containing protein;pseudo=true;start_range=.,228;transl_table=11 NZ_JAIKUA010000229.1 RefSeq gene 425 1168 . + . ID=gene-L2557_RS14365;Name=L2557_RS14365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14365 NZ_JAIKUA010000229.1 Protein Homology CDS 425 1168 . + 0 ID=cds-WP_075672835.1;Parent=gene-L2557_RS14365;Dbxref=GenBank:WP_075672835.1;Name=WP_075672835.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004919884.1;locus_tag=L2557_RS14365;product=DUF4184 family protein;protein_id=WP_075672835.1;transl_table=11 NZ_JAIKUA010000229.1 RefSeq gene 1260 2345 . - . ID=gene-L2557_RS14370;Name=mnmH;gbkey=Gene;gene=mnmH;gene_biotype=protein_coding;locus_tag=L2557_RS14370 NZ_JAIKUA010000229.1 Protein Homology CDS 1260 2345 . - 0 ID=cds-WP_099660438.1;Parent=gene-L2557_RS14370;Dbxref=GenBank:WP_099660438.1;Name=WP_099660438.1;Ontology_term=GO:0002098,GO:0043828;gbkey=CDS;gene=mnmH;go_function=tRNA 2-selenouridine synthase activity|0043828||IEA;go_process=tRNA wobble uridine modification|0002098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536850.1;locus_tag=L2557_RS14370;product=tRNA 2-selenouridine(34) synthase MnmH;protein_id=WP_099660438.1;transl_table=11 NZ_JAIKUA010000229.1 RefSeq gene 2616 2738 . + . ID=gene-L2557_RS17930;Name=L2557_RS17930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17930 NZ_JAIKUA010000229.1 GeneMarkS-2+ CDS 2616 2738 . + 0 ID=cds-WP_257216049.1;Parent=gene-L2557_RS17930;Dbxref=GenBank:WP_257216049.1;Name=WP_257216049.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17930;product=hypothetical protein;protein_id=WP_257216049.1;transl_table=11 NZ_JAIKUA010000229.1 RefSeq gene 2832 3920 . - . ID=gene-L2557_RS14375;Name=L2557_RS14375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14375 NZ_JAIKUA010000229.1 Protein Homology CDS 2832 3920 . - 0 ID=cds-WP_075672833.1;Parent=gene-L2557_RS14375;Dbxref=GenBank:WP_075672833.1;Name=WP_075672833.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000749546.1;locus_tag=L2557_RS14375;product=linear amide C-N hydrolase;protein_id=WP_075672833.1;transl_table=11 NZ_JAIKUA010000229.1 RefSeq gene 4023 4439 . + . ID=gene-L2557_RS14380;Name=L2557_RS14380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14380 NZ_JAIKUA010000229.1 Protein Homology CDS 4023 4439 . + 0 ID=cds-WP_156733403.1;Parent=gene-L2557_RS14380;Dbxref=GenBank:WP_156733403.1;Name=WP_156733403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536859.1;locus_tag=L2557_RS14380;product=DUF6122 family protein;protein_id=WP_156733403.1;transl_table=11 NZ_JAIKUA010000229.1 RefSeq pseudogene 4586 4819 . + . ID=gene-L2557_RS14385;Name=L2557_RS14385;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS14385;partial=true;pseudo=true;start_range=.,4586 NZ_JAIKUA010000229.1 Protein Homology CDS 4586 4819 . + 0 ID=cds-L2557_RS14385;Parent=gene-L2557_RS14385;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015431.6;locus_tag=L2557_RS14385;partial=true;product=LysR substrate-binding domain-containing protein;pseudo=true;start_range=.,4586;transl_table=11 NZ_JAIKUA010000229.1 RefSeq gene 4820 5296 . - . ID=gene-L2557_RS14390;Name=L2557_RS14390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14390 NZ_JAIKUA010000229.1 GeneMarkS-2+ CDS 4820 5296 . - 0 ID=cds-WP_099660441.1;Parent=gene-L2557_RS14390;Dbxref=GenBank:WP_099660441.1;Name=WP_099660441.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS14390;product=hypothetical protein;protein_id=WP_099660441.1;transl_table=11 NZ_JAIKUA010000229.1 RefSeq gene 5533 6885 . + . ID=gene-L2557_RS14395;Name=yegD;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=L2557_RS14395 NZ_JAIKUA010000229.1 Protein Homology CDS 5533 6885 . + 0 ID=cds-WP_099660442.1;Parent=gene-L2557_RS14395;Dbxref=GenBank:WP_099660442.1;Name=WP_099660442.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=yegD;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004717948.1;locus_tag=L2557_RS14395;product=molecular chaperone;protein_id=WP_099660442.1;transl_table=11 NZ_JAIKUA010000229.1 RefSeq gene 7026 8051 . + . ID=gene-L2557_RS14400;Name=L2557_RS14400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14400 NZ_JAIKUA010000229.1 Protein Homology CDS 7026 8051 . + 0 ID=cds-WP_099660443.1;Parent=gene-L2557_RS14400;Dbxref=GenBank:WP_099660443.1;Name=WP_099660443.1;Ontology_term=GO:0006567,GO:0004793;gbkey=CDS;go_function=threonine aldolase activity|0004793||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367931.1;locus_tag=L2557_RS14400;product=threonine aldolase family protein;protein_id=WP_099660443.1;transl_table=11 NZ_JAIKUA010000229.1 RefSeq gene 8224 8487 . + . ID=gene-L2557_RS14405;Name=L2557_RS14405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14405 NZ_JAIKUA010000229.1 Protein Homology CDS 8224 8487 . + 0 ID=cds-WP_075672825.1;Parent=gene-L2557_RS14405;Dbxref=GenBank:WP_075672825.1;Name=WP_075672825.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242966.1;locus_tag=L2557_RS14405;product=YjbD family protein;protein_id=WP_075672825.1;transl_table=11 NZ_JAIKUA010000229.1 RefSeq gene 8532 9290 . - . ID=gene-L2557_RS14410;Name=L2557_RS14410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14410 NZ_JAIKUA010000229.1 GeneMarkS-2+ CDS 8532 9290 . - 0 ID=cds-WP_211839011.1;Parent=gene-L2557_RS14410;Dbxref=GenBank:WP_211839011.1;Name=WP_211839011.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS14410;product=hypothetical protein;protein_id=WP_211839011.1;transl_table=11 NZ_JAIKUA010000229.1 RefSeq gene 9425 10879 . - . ID=gene-L2557_RS14415;Name=xylB;gbkey=Gene;gene=xylB;gene_biotype=protein_coding;locus_tag=L2557_RS14415 NZ_JAIKUA010000229.1 Protein Homology CDS 9425 10879 . - 0 ID=cds-WP_099660445.1;Parent=gene-L2557_RS14415;Dbxref=GenBank:WP_099660445.1;Name=WP_099660445.1;Ontology_term=GO:0005997,GO:0004856;gbkey=CDS;gene=xylB;go_function=D-xylulokinase activity|0004856||IEA;go_process=xylulose metabolic process|0005997||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367933.1;locus_tag=L2557_RS14415;product=xylulokinase;protein_id=WP_099660445.1;transl_table=11 NZ_JAIKUA010000229.1 RefSeq gene 10951 12267 . - . ID=gene-L2557_RS14420;Name=xylA;gbkey=Gene;gene=xylA;gene_biotype=protein_coding;locus_tag=L2557_RS14420 NZ_JAIKUA010000229.1 Protein Homology CDS 10951 12267 . - 0 ID=cds-WP_235410144.1;Parent=gene-L2557_RS14420;Dbxref=GenBank:WP_235410144.1;Name=WP_235410144.1;Ontology_term=GO:0042732,GO:0009045;gbkey=CDS;gene=xylA;go_function=xylose isomerase activity|0009045||IEA;go_process=D-xylose metabolic process|0042732||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251168.1;locus_tag=L2557_RS14420;product=xylose isomerase;protein_id=WP_235410144.1;transl_table=11 NZ_JAIKUA010000229.1 RefSeq gene 12278 13753 . - . ID=gene-L2557_RS14425;Name=nhaC;gbkey=Gene;gene=nhaC;gene_biotype=protein_coding;locus_tag=L2557_RS14425 NZ_JAIKUA010000229.1 Protein Homology CDS 12278 13753 . - 0 ID=cds-WP_075672820.1;Parent=gene-L2557_RS14425;Dbxref=GenBank:WP_075672820.1;Name=WP_075672820.1;Ontology_term=GO:0006814,GO:1902600,GO:0015297,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaC;go_component=membrane|0016020||IEA;go_function=antiporter activity|0015297||IEA,sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242972.1;locus_tag=L2557_RS14425;product=Na+/H+ antiporter NhaC;protein_id=WP_075672820.1;transl_table=11 NZ_JAIKUA010000229.1 RefSeq gene 13760 14929 . - . ID=gene-L2557_RS14430;Name=L2557_RS14430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14430 NZ_JAIKUA010000229.1 Protein Homology CDS 13760 14929 . - 0 ID=cds-WP_099660446.1;Parent=gene-L2557_RS14430;Dbxref=GenBank:WP_099660446.1;Name=WP_099660446.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248084.1;locus_tag=L2557_RS14430;product=MalY/PatB family protein;protein_id=WP_099660446.1;transl_table=11 NZ_JAIKUA010000229.1 RefSeq gene 15118 16284 . + . ID=gene-L2557_RS14435;Name=L2557_RS14435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14435 NZ_JAIKUA010000229.1 Protein Homology CDS 15118 16284 . + 0 ID=cds-WP_075672818.1;Parent=gene-L2557_RS14435;Dbxref=GenBank:WP_075672818.1;Name=WP_075672818.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251164.1;locus_tag=L2557_RS14435;product=XylR family transcriptional regulator;protein_id=WP_075672818.1;transl_table=11 NZ_JAIKUA010000229.1 RefSeq gene 16334 16624 . - . ID=gene-L2557_RS14440;Name=L2557_RS14440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14440 NZ_JAIKUA010000229.1 Protein Homology CDS 16334 16624 . - 0 ID=cds-WP_088495627.1;Parent=gene-L2557_RS14440;Dbxref=GenBank:WP_088495627.1;Name=WP_088495627.1;Ontology_term=GO:0003677,GO:0003690;gbkey=CDS;go_function=DNA binding|0003677||IEA,double-stranded DNA binding|0003690||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536874.1;locus_tag=L2557_RS14440;product=VF530 family protein;protein_id=WP_088495627.1;transl_table=11 ##sequence-region NZ_JAIKUA010000023.1 1 21703 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000023.1 RefSeq region 1 21703 . + . ID=NZ_JAIKUA010000023.1:1..21703;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000023.1 RefSeq gene 129 914 . + . ID=gene-L2557_RS02575;Name=L2557_RS02575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02575 NZ_JAIKUA010000023.1 Protein Homology CDS 129 914 . + 0 ID=cds-WP_075673807.1;Parent=gene-L2557_RS02575;Dbxref=GenBank:WP_075673807.1;Name=WP_075673807.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244368.1;locus_tag=L2557_RS02575;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_075673807.1;transl_table=11 NZ_JAIKUA010000023.1 RefSeq gene 1099 2292 . + . ID=gene-L2557_RS02580;Name=L2557_RS02580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02580 NZ_JAIKUA010000023.1 Protein Homology CDS 1099 2292 . + 0 ID=cds-WP_109401386.1;Parent=gene-L2557_RS02580;Dbxref=GenBank:WP_109401386.1;Name=WP_109401386.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244367.1;locus_tag=L2557_RS02580;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_109401386.1;transl_table=11 NZ_JAIKUA010000023.1 RefSeq gene 2304 2702 . + . ID=gene-L2557_RS02585;Name=L2557_RS02585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02585 NZ_JAIKUA010000023.1 Protein Homology CDS 2304 2702 . + 0 ID=cds-WP_075673805.1;Parent=gene-L2557_RS02585;Dbxref=GenBank:WP_075673805.1;Name=WP_075673805.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248702.1;locus_tag=L2557_RS02585;product=hypothetical protein;protein_id=WP_075673805.1;transl_table=11 NZ_JAIKUA010000023.1 RefSeq gene 2722 3903 . + . ID=gene-L2557_RS02590;Name=L2557_RS02590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02590 NZ_JAIKUA010000023.1 Protein Homology CDS 2722 3903 . + 0 ID=cds-WP_099660054.1;Parent=gene-L2557_RS02590;Dbxref=GenBank:WP_099660054.1;Name=WP_099660054.1;Ontology_term=GO:0019346,GO:0018826,GO:0030170;gbkey=CDS;go_function=methionine gamma-lyase activity|0018826||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244365.1;locus_tag=L2557_RS02590;product=methionine gamma-lyase;protein_id=WP_099660054.1;transl_table=11 NZ_JAIKUA010000023.1 RefSeq gene 3990 5357 . - . ID=gene-L2557_RS02595;Name=L2557_RS02595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02595 NZ_JAIKUA010000023.1 Protein Homology CDS 3990 5357 . - 0 ID=cds-WP_099660055.1;Parent=gene-L2557_RS02595;Dbxref=GenBank:WP_099660055.1;Name=WP_099660055.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248701.1;locus_tag=L2557_RS02595;product=amino acid permease;protein_id=WP_099660055.1;transl_table=11 NZ_JAIKUA010000023.1 RefSeq gene 5524 6195 . + . ID=gene-L2557_RS02600;Name=queE;gbkey=Gene;gene=queE;gene_biotype=protein_coding;locus_tag=L2557_RS02600 NZ_JAIKUA010000023.1 Protein Homology CDS 5524 6195 . + 0 ID=cds-WP_075673802.1;Parent=gene-L2557_RS02600;Dbxref=GenBank:WP_075673802.1;Name=WP_075673802.1;Ontology_term=GO:0006400,GO:0051539,GO:1904047;gbkey=CDS;gene=queE;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250261.1;locus_tag=L2557_RS02600;product=7-carboxy-7-deazaguanine synthase QueE;protein_id=WP_075673802.1;transl_table=11 NZ_JAIKUA010000023.1 RefSeq gene 6275 6640 . - . ID=gene-L2557_RS02605;Name=queD;gbkey=Gene;gene=queD;gene_biotype=protein_coding;locus_tag=L2557_RS02605 NZ_JAIKUA010000023.1 Protein Homology CDS 6275 6640 . - 0 ID=cds-WP_164530180.1;Parent=gene-L2557_RS02605;Dbxref=GenBank:WP_164530180.1;Name=WP_164530180.1;Ontology_term=GO:0008616,GO:0003824;gbkey=CDS;gene=queD;go_function=catalytic activity|0003824||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311647.1;locus_tag=L2557_RS02605;product=6-carboxytetrahydropterin synthase QueD;protein_id=WP_164530180.1;transl_table=11 NZ_JAIKUA010000023.1 RefSeq gene 6938 8749 . + . ID=gene-L2557_RS02610;Name=cysJ;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=L2557_RS02610 NZ_JAIKUA010000023.1 Protein Homology CDS 6938 8749 . + 0 ID=cds-WP_075673800.1;Parent=gene-L2557_RS02610;Dbxref=GenBank:WP_075673800.1;Name=WP_075673800.1;Ontology_term=GO:0000103,GO:0019344,GO:0004783,GO:0010181,GO:0050660;gbkey=CDS;gene=cysJ;go_function=sulfite reductase (NADPH) activity|0004783||IEA,FMN binding|0010181||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=sulfate assimilation|0000103||IEA,cysteine biosynthetic process|0019344||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017627871.1;locus_tag=L2557_RS02610;product=NADPH-dependent assimilatory sulfite reductase flavoprotein subunit;protein_id=WP_075673800.1;transl_table=11 NZ_JAIKUA010000023.1 RefSeq gene 8750 10480 . + . ID=gene-L2557_RS02615;Name=cysI;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=L2557_RS02615 NZ_JAIKUA010000023.1 Protein Homology CDS 8750 10480 . + 0 ID=cds-WP_075673799.1;Parent=gene-L2557_RS02615;Dbxref=GenBank:WP_075673799.1;Name=WP_075673799.1;Ontology_term=GO:0000103,GO:0008652,GO:0004783,GO:0050661,GO:0051539,GO:0009337;gbkey=CDS;gene=cysI;go_component=sulfite reductase complex (NADPH)|0009337||IEA;go_function=sulfite reductase (NADPH) activity|0004783||IEA,NADP binding|0050661||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=sulfate assimilation|0000103||IEA,amino acid biosynthetic process|0008652||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248698.1;locus_tag=L2557_RS02615;product=assimilatory sulfite reductase (NADPH) hemoprotein subunit;protein_id=WP_075673799.1;transl_table=11 NZ_JAIKUA010000023.1 RefSeq gene 10477 11208 . + . ID=gene-L2557_RS02620;Name=L2557_RS02620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02620 NZ_JAIKUA010000023.1 Protein Homology CDS 10477 11208 . + 0 ID=cds-WP_075673798.1;Parent=gene-L2557_RS02620;Dbxref=GenBank:WP_075673798.1;Name=WP_075673798.1;Ontology_term=GO:0019379,GO:0003824,GO:0004604;gbkey=CDS;go_function=catalytic activity|0003824||IEA,phosphoadenylyl-sulfate reductase (thioredoxin) activity|0004604||IEA;go_process=sulfate assimilation%2C phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)|0019379||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017490871.1;locus_tag=L2557_RS02620;product=phosphoadenylyl-sulfate reductase;protein_id=WP_075673798.1;transl_table=11 NZ_JAIKUA010000023.1 RefSeq gene 11414 12838 . + . ID=gene-L2557_RS02625;Name=cysG;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=L2557_RS02625 NZ_JAIKUA010000023.1 Protein Homology CDS 11414 12838 . + 0 ID=cds-WP_099660056.1;Parent=gene-L2557_RS02625;Dbxref=GenBank:WP_099660056.1;Name=WP_099660056.1;Ontology_term=GO:0019354,GO:0004851,GO:0043115,GO:0051266,GO:0051287;gbkey=CDS;gene=cysG;go_function=uroporphyrin-III C-methyltransferase activity|0004851||IEA,precorrin-2 dehydrogenase activity|0043115||IEA,sirohydrochlorin ferrochelatase activity|0051266||IEA,NAD binding|0051287||IEA;go_process=siroheme biosynthetic process|0019354||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368297.1;locus_tag=L2557_RS02625;product=siroheme synthase CysG;protein_id=WP_099660056.1;transl_table=11 NZ_JAIKUA010000023.1 RefSeq gene 12850 13758 . + . ID=gene-L2557_RS02630;Name=cysD;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=L2557_RS02630 NZ_JAIKUA010000023.1 Protein Homology CDS 12850 13758 . + 0 ID=cds-WP_099660057.1;Parent=gene-L2557_RS02630;Dbxref=GenBank:WP_099660057.1;Name=WP_099660057.1;Ontology_term=GO:0000103,GO:0004781;gbkey=CDS;gene=cysD;go_function=sulfate adenylyltransferase (ATP) activity|0004781||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228489.1;locus_tag=L2557_RS02630;product=sulfate adenylyltransferase subunit CysD;protein_id=WP_099660057.1;transl_table=11 NZ_JAIKUA010000023.1 RefSeq gene 13770 15221 . + . ID=gene-L2557_RS02635;Name=cysN;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=L2557_RS02635 NZ_JAIKUA010000023.1 Protein Homology CDS 13770 15221 . + 0 ID=cds-WP_156733981.1;Parent=gene-L2557_RS02635;Dbxref=GenBank:WP_156733981.1;Name=WP_156733981.1;Ontology_term=GO:0006790,GO:0003924,GO:0005525;gbkey=CDS;gene=cysN;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=sulfur compound metabolic process|0006790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244355.1;locus_tag=L2557_RS02635;product=sulfate adenylyltransferase subunit CysN;protein_id=WP_156733981.1;transl_table=11 NZ_JAIKUA010000023.1 RefSeq gene 15221 15835 . + . ID=gene-L2557_RS02640;Name=cysC;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=L2557_RS02640 NZ_JAIKUA010000023.1 Protein Homology CDS 15221 15835 . + 0 ID=cds-WP_099660059.1;Parent=gene-L2557_RS02640;Dbxref=GenBank:WP_099660059.1;Name=WP_099660059.1;Ontology_term=GO:0000103,GO:0004020,GO:0005524;gbkey=CDS;gene=cysC;go_function=adenylylsulfate kinase activity|0004020||IEA,ATP binding|0005524||IEA;go_process=sulfate assimilation|0000103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244354.1;locus_tag=L2557_RS02640;product=adenylyl-sulfate kinase;protein_id=WP_099660059.1;transl_table=11 NZ_JAIKUA010000023.1 RefSeq gene 16167 16457 . + . ID=gene-L2557_RS02645;Name=ftsB;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=L2557_RS02645 NZ_JAIKUA010000023.1 Protein Homology CDS 16167 16457 . + 0 ID=cds-WP_036913758.1;Parent=gene-L2557_RS02645;Dbxref=GenBank:WP_036913758.1;Name=WP_036913758.1;gbkey=CDS;gene=ftsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244353.1;locus_tag=L2557_RS02645;product=cell division protein FtsB;protein_id=WP_036913758.1;transl_table=11 NZ_JAIKUA010000023.1 RefSeq gene 16497 17243 . + . ID=gene-L2557_RS02650;Name=ispD;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=L2557_RS02650 NZ_JAIKUA010000023.1 Protein Homology CDS 16497 17243 . + 0 ID=cds-WP_075673793.1;Parent=gene-L2557_RS02650;Dbxref=GenBank:WP_075673793.1;Name=WP_075673793.1;Ontology_term=GO:0008299,GO:0019288,GO:0050518;gbkey=CDS;gene=ispD;go_function=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity|0050518||IEA;go_process=isoprenoid biosynthetic process|0008299||IEA,isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244352.1;locus_tag=L2557_RS02650;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=WP_075673793.1;transl_table=11 NZ_JAIKUA010000023.1 RefSeq gene 17247 17732 . + . ID=gene-L2557_RS02655;Name=ispF;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=L2557_RS02655 NZ_JAIKUA010000023.1 Protein Homology CDS 17247 17732 . + 0 ID=cds-WP_075673792.1;Parent=gene-L2557_RS02655;Dbxref=GenBank:WP_075673792.1;Name=WP_075673792.1;Ontology_term=GO:0019288,GO:0008685;gbkey=CDS;gene=ispF;go_function=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase activity|0008685||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244351.1;locus_tag=L2557_RS02655;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=WP_075673792.1;transl_table=11 NZ_JAIKUA010000023.1 RefSeq gene 17729 18781 . + . ID=gene-L2557_RS02660;Name=truD;gbkey=Gene;gene=truD;gene_biotype=protein_coding;locus_tag=L2557_RS02660 NZ_JAIKUA010000023.1 Protein Homology CDS 17729 18781 . + 0 ID=cds-WP_075673791.1;Parent=gene-L2557_RS02660;Dbxref=GenBank:WP_075673791.1;Name=WP_075673791.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=truD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250266.1;locus_tag=L2557_RS02660;product=tRNA pseudouridine(13) synthase TruD;protein_id=WP_075673791.1;transl_table=11 NZ_JAIKUA010000023.1 RefSeq gene 18759 19523 . + . ID=gene-L2557_RS02665;Name=surE;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=L2557_RS02665 NZ_JAIKUA010000023.1 Protein Homology CDS 18759 19523 . + 0 ID=cds-WP_075673790.1;Parent=gene-L2557_RS02665;Dbxref=GenBank:WP_075673790.1;Name=WP_075673790.1;Ontology_term=GO:0008252;gbkey=CDS;gene=surE;go_function=nucleotidase activity|0008252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244347.1;locus_tag=L2557_RS02665;product=5'/3'-nucleotidase SurE;protein_id=WP_075673790.1;transl_table=11 NZ_JAIKUA010000023.1 RefSeq gene 19517 20143 . + . ID=gene-L2557_RS02670;Name=L2557_RS02670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02670 NZ_JAIKUA010000023.1 Protein Homology CDS 19517 20143 . + 0 ID=cds-WP_075673789.1;Parent=gene-L2557_RS02670;Dbxref=GenBank:WP_075673789.1;Name=WP_075673789.1;Ontology_term=GO:0036211,GO:0004719;gbkey=CDS;go_function=protein-L-isoaspartate (D-aspartate) O-methyltransferase activity|0004719||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244345.1;locus_tag=L2557_RS02670;product=protein-L-isoaspartate(D-aspartate) O-methyltransferase;protein_id=WP_075673789.1;transl_table=11 NZ_JAIKUA010000023.1 RefSeq gene 20297 21415 . + . ID=gene-L2557_RS02675;Name=nlpD;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=L2557_RS02675 NZ_JAIKUA010000023.1 Protein Homology CDS 20297 21415 . + 0 ID=cds-WP_159363549.1;Parent=gene-L2557_RS02675;Dbxref=GenBank:WP_159363549.1;Name=WP_159363549.1;gbkey=CDS;gene=nlpD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001272576.1;locus_tag=L2557_RS02675;product=murein hydrolase activator NlpD;protein_id=WP_159363549.1;transl_table=11 ##sequence-region NZ_JAIKUA010000230.1 1 16598 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000230.1 RefSeq region 1 16598 . + . ID=NZ_JAIKUA010000230.1:1..16598;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000230.1 RefSeq gene 36 1778 . + . ID=gene-L2557_RS14445;Name=L2557_RS14445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14445 NZ_JAIKUA010000230.1 Protein Homology CDS 36 1778 . + 0 ID=cds-WP_099660630.1;Parent=gene-L2557_RS14445;Dbxref=GenBank:WP_099660630.1;Name=WP_099660630.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628015.1;locus_tag=L2557_RS14445;product=YadA-like family protein;protein_id=WP_099660630.1;transl_table=11 NZ_JAIKUA010000230.1 RefSeq gene 1911 2228 . + . ID=gene-L2557_RS14450;Name=L2557_RS14450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14450 NZ_JAIKUA010000230.1 Protein Homology CDS 1911 2228 . + 0 ID=cds-WP_159241960.1;Parent=gene-L2557_RS14450;Dbxref=GenBank:WP_159241960.1;Name=WP_159241960.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243593.1;locus_tag=L2557_RS14450;product=hypothetical protein;protein_id=WP_159241960.1;transl_table=11 NZ_JAIKUA010000230.1 RefSeq gene 2458 2868 . - . ID=gene-L2557_RS14455;Name=L2557_RS14455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14455 NZ_JAIKUA010000230.1 Protein Homology CDS 2458 2868 . - 0 ID=cds-WP_235410145.1;Parent=gene-L2557_RS14455;Dbxref=GenBank:WP_235410145.1;Name=WP_235410145.1;Ontology_term=GO:0016787,GO:0016790;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,thiolester hydrolase activity|0016790||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533237.1;locus_tag=L2557_RS14455;product=acyl-CoA thioesterase;protein_id=WP_235410145.1;transl_table=11 NZ_JAIKUA010000230.1 RefSeq gene 2975 3754 . - . ID=gene-L2557_RS14460;Name=L2557_RS14460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14460 NZ_JAIKUA010000230.1 Protein Homology CDS 2975 3754 . - 0 ID=cds-WP_075673838.1;Parent=gene-L2557_RS14460;Dbxref=GenBank:WP_075673838.1;Name=WP_075673838.1;Ontology_term=GO:0009058,GO:0016853,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isomerase activity|0016853||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250752.1;locus_tag=L2557_RS14460;product=PhzF family phenazine biosynthesis protein;protein_id=WP_075673838.1;transl_table=11 NZ_JAIKUA010000230.1 RefSeq gene 3917 5452 . - . ID=gene-L2557_RS14465;Name=L2557_RS14465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14465 NZ_JAIKUA010000230.1 Protein Homology CDS 3917 5452 . - 0 ID=cds-WP_235410146.1;Parent=gene-L2557_RS14465;Dbxref=GenBank:WP_235410146.1;Name=WP_235410146.1;Ontology_term=GO:0015833,GO:0055085,GO:0022857,GO:1904680,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA,peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250754.1;locus_tag=L2557_RS14465;product=peptide MFS transporter;protein_id=WP_235410146.1;transl_table=11 NZ_JAIKUA010000230.1 RefSeq gene 5873 7081 . - . ID=gene-L2557_RS14470;Name=mdtG;gbkey=Gene;gene=mdtG;gene_biotype=protein_coding;locus_tag=L2557_RS14470 NZ_JAIKUA010000230.1 Protein Homology CDS 5873 7081 . - 0 ID=cds-WP_099660629.1;Parent=gene-L2557_RS14470;Dbxref=GenBank:WP_099660629.1;Name=WP_099660629.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=mdtG;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628016.1;locus_tag=L2557_RS14470;product=multidrug efflux MFS transporter MdtG;protein_id=WP_099660629.1;transl_table=11 NZ_JAIKUA010000230.1 RefSeq gene 7354 8295 . - . ID=gene-L2557_RS14475;Name=L2557_RS14475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14475 NZ_JAIKUA010000230.1 Protein Homology CDS 7354 8295 . - 0 ID=cds-WP_099660628.1;Parent=gene-L2557_RS14475;Dbxref=GenBank:WP_099660628.1;Name=WP_099660628.1;Ontology_term=GO:0036104,GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;go_process=Kdo2-lipid A biosynthetic process|0036104||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004241457.1;locus_tag=L2557_RS14475;product=Kdo(2)-lipid IV(A) acyltransferase;protein_id=WP_099660628.1;transl_table=11 NZ_JAIKUA010000230.1 RefSeq gene 8370 8972 . - . ID=gene-L2557_RS14480;Name=ttrR;gbkey=Gene;gene=ttrR;gene_biotype=protein_coding;locus_tag=L2557_RS14480 NZ_JAIKUA010000230.1 Protein Homology CDS 8370 8972 . - 0 ID=cds-WP_075673842.1;Parent=gene-L2557_RS14480;Dbxref=GenBank:WP_075673842.1;Name=WP_075673842.1;gbkey=CDS;gene=ttrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248358.1;locus_tag=L2557_RS14480;product=tetrathionate respiration response regulator TtrR;protein_id=WP_075673842.1;transl_table=11 NZ_JAIKUA010000230.1 RefSeq gene 8983 10746 . - . ID=gene-L2557_RS14485;Name=ttrS;gbkey=Gene;gene=ttrS;gene_biotype=protein_coding;locus_tag=L2557_RS14485 NZ_JAIKUA010000230.1 Protein Homology CDS 8983 10746 . - 0 ID=cds-WP_075673843.1;Parent=gene-L2557_RS14485;Dbxref=GenBank:WP_075673843.1;Name=WP_075673843.1;gbkey=CDS;gene=ttrS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628017.1;locus_tag=L2557_RS14485;product=tetrathionate respiration histidine kinase TtrS;protein_id=WP_075673843.1;transl_table=11 NZ_JAIKUA010000230.1 RefSeq gene 10924 11667 . + . ID=gene-L2557_RS14490;Name=ttrB;gbkey=Gene;gene=ttrB;gene_biotype=protein_coding;locus_tag=L2557_RS14490 NZ_JAIKUA010000230.1 Protein Homology CDS 10924 11667 . + 0 ID=cds-WP_072068548.1;Parent=gene-L2557_RS14490;Dbxref=GenBank:WP_072068548.1;Name=WP_072068548.1;gbkey=CDS;gene=ttrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243581.1;locus_tag=L2557_RS14490;product=tetrathionate reductase subunit TtrB;protein_id=WP_072068548.1;transl_table=11 NZ_JAIKUA010000230.1 RefSeq gene 11664 12692 . + . ID=gene-L2557_RS14495;Name=ttrC;gbkey=Gene;gene=ttrC;gene_biotype=protein_coding;locus_tag=L2557_RS14495 NZ_JAIKUA010000230.1 Protein Homology CDS 11664 12692 . + 0 ID=cds-WP_075673844.1;Parent=gene-L2557_RS14495;Dbxref=GenBank:WP_075673844.1;Name=WP_075673844.1;gbkey=CDS;gene=ttrC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243580.1;locus_tag=L2557_RS14495;product=tetrathionate reductase subunit TtrC;protein_id=WP_075673844.1;transl_table=11 NZ_JAIKUA010000230.1 RefSeq gene 12685 15765 . + . ID=gene-L2557_RS14500;Name=ttrA;gbkey=Gene;gene=ttrA;gene_biotype=protein_coding;locus_tag=L2557_RS14500 NZ_JAIKUA010000230.1 Protein Homology CDS 12685 15765 . + 0 ID=cds-WP_075673845.1;Parent=gene-L2557_RS14500;Dbxref=GenBank:WP_075673845.1;Name=WP_075673845.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;gene=ttrA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011816071.1;locus_tag=L2557_RS14500;product=tetrathionate reductase subunit TtrA;protein_id=WP_075673845.1;transl_table=11 NZ_JAIKUA010000230.1 RefSeq gene 16030 16598 . - . ID=gene-L2557_RS14505;Name=L2557_RS14505;end_range=16598,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14505;partial=true NZ_JAIKUA010000230.1 Protein Homology CDS 16030 16598 . - 2 ID=cds-WP_235410147.1;Parent=gene-L2557_RS14505;Dbxref=GenBank:WP_235410147.1;Name=WP_235410147.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;end_range=16598,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243578.1;locus_tag=L2557_RS14505;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_235410147.1;transl_table=11 ##sequence-region NZ_JAIKUA010000231.1 1 4888 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000231.1 RefSeq region 1 4888 . + . ID=NZ_JAIKUA010000231.1:1..4888;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000231.1 RefSeq gene 213 1196 . + . ID=gene-L2557_RS14510;Name=zntB;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=L2557_RS14510 NZ_JAIKUA010000231.1 Protein Homology CDS 213 1196 . + 0 ID=cds-WP_075672146.1;Parent=gene-L2557_RS14510;Dbxref=GenBank:WP_075672146.1;Name=WP_075672146.1;Ontology_term=GO:0071577,GO:0005385,GO:0005886;gbkey=CDS;gene=zntB;go_component=plasma membrane|0005886||IEA;go_function=zinc ion transmembrane transporter activity|0005385||IEA;go_process=zinc ion transmembrane transport|0071577||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004702124.1;locus_tag=L2557_RS14510;product=zinc transporter ZntB;protein_id=WP_075672146.1;transl_table=11 NZ_JAIKUA010000231.1 RefSeq gene 1504 2427 . - . ID=gene-L2557_RS14515;Name=ttcA;gbkey=Gene;gene=ttcA;gene_biotype=protein_coding;locus_tag=L2557_RS14515 NZ_JAIKUA010000231.1 Protein Homology CDS 1504 2427 . - 0 ID=cds-WP_099659686.1;Parent=gene-L2557_RS14515;Dbxref=GenBank:WP_099659686.1;Name=WP_099659686.1;Ontology_term=GO:0008033;gbkey=CDS;gene=ttcA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243086.1;locus_tag=L2557_RS14515;product=tRNA 2-thiocytidine(32) synthetase TtcA;protein_id=WP_099659686.1;transl_table=11 NZ_JAIKUA010000231.1 RefSeq gene 2776 3417 . - . ID=gene-L2557_RS14520;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=L2557_RS14520 NZ_JAIKUA010000231.1 Protein Homology CDS 2776 3417 . - 0 ID=cds-WP_099075287.1;Parent=gene-L2557_RS14520;Dbxref=GenBank:WP_099075287.1;Name=WP_099075287.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017826963.1;locus_tag=L2557_RS14520;product=leucine efflux protein LeuE;protein_id=WP_099075287.1;transl_table=11 NZ_JAIKUA010000231.1 RefSeq gene 3527 3895 . + . ID=gene-L2557_RS14525;Name=L2557_RS14525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14525 NZ_JAIKUA010000231.1 GeneMarkS-2+ CDS 3527 3895 . + 0 ID=cds-WP_075672140.1;Parent=gene-L2557_RS14525;Dbxref=GenBank:WP_075672140.1;Name=WP_075672140.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS14525;product=hypothetical protein;protein_id=WP_075672140.1;transl_table=11 NZ_JAIKUA010000231.1 RefSeq gene 4169 4471 . + . ID=gene-L2557_RS14530;Name=L2557_RS14530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14530 NZ_JAIKUA010000231.1 Protein Homology CDS 4169 4471 . + 0 ID=cds-WP_075672138.1;Parent=gene-L2557_RS14530;Dbxref=GenBank:WP_075672138.1;Name=WP_075672138.1;Ontology_term=GO:0017000,GO:0004497,GO:0016491;gbkey=CDS;go_function=monooxygenase activity|0004497||IEA,oxidoreductase activity|0016491||IEA;go_process=antibiotic biosynthetic process|0017000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253191.1;locus_tag=L2557_RS14530;product=putative quinol monooxygenase;protein_id=WP_075672138.1;transl_table=11 NZ_JAIKUA010000231.1 RefSeq gene 4535 4852 . + . ID=gene-L2557_RS14535;Name=L2557_RS14535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14535 NZ_JAIKUA010000231.1 GeneMarkS-2+ CDS 4535 4852 . + 0 ID=cds-WP_099659687.1;Parent=gene-L2557_RS14535;Dbxref=GenBank:WP_099659687.1;Name=WP_099659687.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS14535;product=hypothetical protein;protein_id=WP_099659687.1;transl_table=11 ##sequence-region NZ_JAIKUA010000232.1 1 12700 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000232.1 RefSeq region 1 12700 . + . ID=NZ_JAIKUA010000232.1:1..12700;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000232.1 RefSeq gene 1 713 . - . ID=gene-L2557_RS14540;Name=L2557_RS14540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14540;partial=true;start_range=.,1 NZ_JAIKUA010000232.1 Protein Homology CDS 1 713 . - 0 ID=cds-WP_235410148.1;Parent=gene-L2557_RS14540;Dbxref=GenBank:WP_235410148.1;Name=WP_235410148.1;Ontology_term=GO:1901271;gbkey=CDS;go_process=lipooligosaccharide biosynthetic process|1901271||IEA;inference=COORDINATES: protein motif:HMM:NF013882.6;locus_tag=L2557_RS14540;partial=true;product=glycosyltransferase family 25 protein;protein_id=WP_235410148.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000232.1 RefSeq gene 718 1683 . - . ID=gene-L2557_RS14545;Name=rfaC;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=L2557_RS14545 NZ_JAIKUA010000232.1 Protein Homology CDS 718 1683 . - 0 ID=cds-WP_099659493.1;Parent=gene-L2557_RS14545;Dbxref=GenBank:WP_099659493.1;Name=WP_099659493.1;Ontology_term=GO:0009244,GO:0008920;gbkey=CDS;gene=rfaC;go_function=lipopolysaccharide heptosyltransferase activity|0008920||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249742.1;locus_tag=L2557_RS14545;product=lipopolysaccharide heptosyltransferase RfaC;protein_id=WP_099659493.1;transl_table=11 NZ_JAIKUA010000232.1 RefSeq gene 1680 2729 . - . ID=gene-L2557_RS14550;Name=rfaF;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=L2557_RS14550 NZ_JAIKUA010000232.1 Protein Homology CDS 1680 2729 . - 0 ID=cds-WP_099659492.1;Parent=gene-L2557_RS14550;Dbxref=GenBank:WP_099659492.1;Name=WP_099659492.1;Ontology_term=GO:0009103,GO:0016757;gbkey=CDS;gene=rfaF;go_function=glycosyltransferase activity|0016757||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534214.1;locus_tag=L2557_RS14550;product=ADP-heptose--LPS heptosyltransferase RfaF;protein_id=WP_099659492.1;transl_table=11 NZ_JAIKUA010000232.1 RefSeq gene 2739 3677 . - . ID=gene-L2557_RS14555;Name=rfaD;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=L2557_RS14555 NZ_JAIKUA010000232.1 Protein Homology CDS 2739 3677 . - 0 ID=cds-WP_099659491.1;Parent=gene-L2557_RS14555;Dbxref=GenBank:WP_099659491.1;Name=WP_099659491.1;Ontology_term=GO:0005975,GO:0008712;gbkey=CDS;gene=rfaD;go_function=ADP-glyceromanno-heptose 6-epimerase activity|0008712||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368661.1;locus_tag=L2557_RS14555;product=ADP-glyceromanno-heptose 6-epimerase;protein_id=WP_099659491.1;transl_table=11 NZ_JAIKUA010000232.1 RefSeq gene 3948 5147 . + . ID=gene-L2557_RS14560;Name=L2557_RS14560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14560 NZ_JAIKUA010000232.1 Protein Homology CDS 3948 5147 . + 0 ID=cds-WP_099659490.1;Parent=gene-L2557_RS14560;Dbxref=GenBank:WP_099659490.1;Name=WP_099659490.1;Ontology_term=GO:0009058,GO:0008890,GO:0030170;gbkey=CDS;go_function=glycine C-acetyltransferase activity|0008890||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249740.1;locus_tag=L2557_RS14560;product=glycine C-acetyltransferase;protein_id=WP_099659490.1;transl_table=11 NZ_JAIKUA010000232.1 RefSeq gene 5157 6182 . + . ID=gene-L2557_RS14565;Name=tdh;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=L2557_RS14565 NZ_JAIKUA010000232.1 Protein Homology CDS 5157 6182 . + 0 ID=cds-WP_099659489.1;Parent=gene-L2557_RS14565;Dbxref=GenBank:WP_099659489.1;Name=WP_099659489.1;Ontology_term=GO:0006567,GO:0008743;gbkey=CDS;gene=tdh;go_function=L-threonine 3-dehydrogenase activity|0008743||IEA;go_process=L-threonine catabolic process|0006567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534211.1;locus_tag=L2557_RS14565;product=L-threonine 3-dehydrogenase;protein_id=WP_099659489.1;transl_table=11 NZ_JAIKUA010000232.1 RefSeq gene 6233 7147 . - . ID=gene-L2557_RS14570;Name=L2557_RS14570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14570 NZ_JAIKUA010000232.1 Protein Homology CDS 6233 7147 . - 0 ID=cds-WP_235410149.1;Parent=gene-L2557_RS14570;Dbxref=GenBank:WP_235410149.1;Name=WP_235410149.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628699.1;locus_tag=L2557_RS14570;product=divergent polysaccharide deacetylase family protein;protein_id=WP_235410149.1;transl_table=11 NZ_JAIKUA010000232.1 RefSeq gene 7201 8493 . - . ID=gene-L2557_RS14575;Name=envC;gbkey=Gene;gene=envC;gene_biotype=protein_coding;locus_tag=L2557_RS14575 NZ_JAIKUA010000232.1 Protein Homology CDS 7201 8493 . - 0 ID=cds-WP_099659487.1;Parent=gene-L2557_RS14575;Dbxref=GenBank:WP_099659487.1;Name=WP_099659487.1;gbkey=CDS;gene=envC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246458.1;locus_tag=L2557_RS14575;product=murein hydrolase activator EnvC;protein_id=WP_099659487.1;transl_table=11 NZ_JAIKUA010000232.1 RefSeq gene 8709 10037 . - . ID=gene-L2557_RS14580;Name=rimO;gbkey=Gene;gene=rimO;gene_biotype=protein_coding;locus_tag=L2557_RS14580 NZ_JAIKUA010000232.1 Protein Homology CDS 8709 10037 . - 0 ID=cds-WP_099659486.1;Parent=gene-L2557_RS14580;Dbxref=GenBank:WP_099659486.1;Name=WP_099659486.1;Ontology_term=GO:0018339,GO:0008172,GO:0016740,GO:0016782,GO:0051539,GO:1904047,GO:0005737;gbkey=CDS;gene=rimO;go_component=cytoplasm|0005737||IEA;go_function=S-methyltransferase activity|0008172||IEA,transferase activity|0016740||IEA,transferase activity%2C transferring sulphur-containing groups|0016782||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid|0018339||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534208.1;locus_tag=L2557_RS14580;product=30S ribosomal protein S12 methylthiotransferase RimO;protein_id=WP_099659486.1;transl_table=11 NZ_JAIKUA010000232.1 RefSeq gene 10397 10834 . + . ID=gene-L2557_RS14585;Name=L2557_RS14585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14585 NZ_JAIKUA010000232.1 Protein Homology CDS 10397 10834 . + 0 ID=cds-WP_099659563.1;Parent=gene-L2557_RS14585;Dbxref=GenBank:WP_099659563.1;Name=WP_099659563.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628697.1;locus_tag=L2557_RS14585;product=rhodanese-like domain-containing protein;protein_id=WP_099659563.1;transl_table=11 NZ_JAIKUA010000232.1 RefSeq gene 10904 11374 . + . ID=gene-L2557_RS14590;Name=secB;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=L2557_RS14590 NZ_JAIKUA010000232.1 Protein Homology CDS 10904 11374 . + 0 ID=cds-WP_006534205.1;Parent=gene-L2557_RS14590;Dbxref=GenBank:WP_006534205.1;Name=WP_006534205.1;gbkey=CDS;gene=secB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246454.1;locus_tag=L2557_RS14590;product=protein-export chaperone SecB;protein_id=WP_006534205.1;transl_table=11 NZ_JAIKUA010000232.1 RefSeq gene 11374 12390 . + . ID=gene-L2557_RS14595;Name=gpsA;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=L2557_RS14595 NZ_JAIKUA010000232.1 Protein Homology CDS 11374 12390 . + 0 ID=cds-WP_088494106.1;Parent=gene-L2557_RS14595;Dbxref=GenBank:WP_088494106.1;Name=WP_088494106.1;Ontology_term=GO:0006072,GO:0047952;gbkey=CDS;gene=gpsA;go_function=glycerol-3-phosphate dehydrogenase [NAD(P)+] activity|0047952||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534204.1;locus_tag=L2557_RS14595;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=WP_088494106.1;transl_table=11 NZ_JAIKUA010000232.1 RefSeq gene 12481 12700 . + . ID=gene-L2557_RS14600;Name=L2557_RS14600;end_range=12700,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14600;partial=true NZ_JAIKUA010000232.1 Protein Homology CDS 12481 12700 . + 0 ID=cds-WP_412761649.1;Parent=gene-L2557_RS14600;Dbxref=GenBank:WP_412761649.1;Name=WP_412761649.1;Ontology_term=GO:0006535,GO:0009001,GO:0005737;end_range=12700,.;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014701938.1;locus_tag=L2557_RS14600;partial=true;product=serine O-acetyltransferase;protein_id=WP_412761649.1;transl_table=11 ##sequence-region NZ_JAIKUA010000233.1 1 9064 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000233.1 RefSeq region 1 9064 . + . ID=NZ_JAIKUA010000233.1:1..9064;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000233.1 RefSeq gene 373 1323 . + . ID=gene-L2557_RS14605;Name=cyoA;gbkey=Gene;gene=cyoA;gene_biotype=protein_coding;locus_tag=L2557_RS14605 NZ_JAIKUA010000233.1 Protein Homology CDS 373 1323 . + 0 ID=cds-WP_075671995.1;Parent=gene-L2557_RS14605;Dbxref=GenBank:WP_075671995.1;Name=WP_075671995.1;Ontology_term=GO:0022900,GO:0004129;gbkey=CDS;gene=cyoA;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=electron transport chain|0022900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535098.1;locus_tag=L2557_RS14605;product=cytochrome o ubiquinol oxidase subunit II;protein_id=WP_075671995.1;transl_table=11 NZ_JAIKUA010000233.1 RefSeq gene 1328 3310 . + . ID=gene-L2557_RS14610;Name=cyoB;gbkey=Gene;gene=cyoB;gene_biotype=protein_coding;locus_tag=L2557_RS14610 NZ_JAIKUA010000233.1 Protein Homology CDS 1328 3310 . + 0 ID=cds-WP_075671997.1;Parent=gene-L2557_RS14610;Dbxref=GenBank:WP_075671997.1;Name=WP_075671997.1;Ontology_term=GO:0004129;gbkey=CDS;gene=cyoB;go_function=cytochrome-c oxidase activity|0004129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367478.1;locus_tag=L2557_RS14610;product=cytochrome o ubiquinol oxidase subunit I;protein_id=WP_075671997.1;transl_table=11 NZ_JAIKUA010000233.1 RefSeq gene 3310 3921 . + . ID=gene-L2557_RS14615;Name=L2557_RS14615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14615 NZ_JAIKUA010000233.1 Protein Homology CDS 3310 3921 . + 0 ID=cds-WP_036932890.1;Parent=gene-L2557_RS14615;Dbxref=GenBank:WP_036932890.1;Name=WP_036932890.1;Ontology_term=GO:0022904,GO:0004129;gbkey=CDS;go_function=cytochrome-c oxidase activity|0004129||IEA;go_process=respiratory electron transport chain|0022904||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163525.1;locus_tag=L2557_RS14615;product=cytochrome o ubiquinol oxidase subunit III;protein_id=WP_036932890.1;transl_table=11 NZ_JAIKUA010000233.1 RefSeq gene 3921 4253 . + . ID=gene-L2557_RS14620;Name=L2557_RS14620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14620 NZ_JAIKUA010000233.1 Protein Homology CDS 3921 4253 . + 0 ID=cds-WP_006535101.1;Parent=gene-L2557_RS14620;Dbxref=GenBank:WP_006535101.1;Name=WP_006535101.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208652.1;locus_tag=L2557_RS14620;product=cytochrome o ubiquinol oxidase subunit IV;protein_id=WP_006535101.1;transl_table=11 NZ_JAIKUA010000233.1 RefSeq gene 4265 5149 . + . ID=gene-L2557_RS14625;Name=cyoE;gbkey=Gene;gene=cyoE;gene_biotype=protein_coding;locus_tag=L2557_RS14625 NZ_JAIKUA010000233.1 Protein Homology CDS 4265 5149 . + 0 ID=cds-WP_069368580.1;Parent=gene-L2557_RS14625;Dbxref=GenBank:WP_069368580.1;Name=WP_069368580.1;Ontology_term=GO:0048034,GO:0008495,GO:0016020;gbkey=CDS;gene=cyoE;go_component=membrane|0016020||IEA;go_function=protoheme IX farnesyltransferase activity|0008495||IEA;go_process=heme O biosynthetic process|0048034||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148018.1;locus_tag=L2557_RS14625;product=heme o synthase;protein_id=WP_069368580.1;transl_table=11 NZ_JAIKUA010000233.1 RefSeq gene 5323 6693 . + . ID=gene-L2557_RS14630;Name=L2557_RS14630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14630 NZ_JAIKUA010000233.1 Protein Homology CDS 5323 6693 . + 0 ID=cds-WP_075671999.1;Parent=gene-L2557_RS14630;Dbxref=GenBank:WP_075671999.1;Name=WP_075671999.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662775.1;locus_tag=L2557_RS14630;product=MFS transporter;protein_id=WP_075671999.1;transl_table=11 NZ_JAIKUA010000233.1 RefSeq gene 6772 7263 . - . ID=gene-L2557_RS14635;Name=L2557_RS14635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14635 NZ_JAIKUA010000233.1 Protein Homology CDS 6772 7263 . - 0 ID=cds-WP_069368582.1;Parent=gene-L2557_RS14635;Dbxref=GenBank:WP_069368582.1;Name=WP_069368582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082537.1;locus_tag=L2557_RS14635;product=YajQ family cyclic di-GMP-binding protein;protein_id=WP_069368582.1;transl_table=11 NZ_JAIKUA010000233.1 RefSeq gene 7527 8447 . + . ID=gene-L2557_RS14640;Name=panE;gbkey=Gene;gene=panE;gene_biotype=protein_coding;locus_tag=L2557_RS14640 NZ_JAIKUA010000233.1 Protein Homology CDS 7527 8447 . + 0 ID=cds-WP_075672001.1;Parent=gene-L2557_RS14640;Dbxref=GenBank:WP_075672001.1;Name=WP_075672001.1;Ontology_term=GO:0015940,GO:0008677;gbkey=CDS;gene=panE;go_function=2-dehydropantoate 2-reductase activity|0008677||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247218.1;locus_tag=L2557_RS14640;product=2-dehydropantoate 2-reductase;protein_id=WP_075672001.1;transl_table=11 NZ_JAIKUA010000233.1 RefSeq gene 8416 9033 . + . ID=gene-L2557_RS14645;Name=yajL;gbkey=Gene;gene=yajL;gene_biotype=protein_coding;locus_tag=L2557_RS14645 NZ_JAIKUA010000233.1 Protein Homology CDS 8416 9033 . + 0 ID=cds-WP_075672003.1;Parent=gene-L2557_RS14645;Dbxref=GenBank:WP_075672003.1;Name=WP_075672003.1;gbkey=CDS;gene=yajL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252560.1;locus_tag=L2557_RS14645;product=protein deglycase YajL;protein_id=WP_075672003.1;transl_table=11 ##sequence-region NZ_JAIKUA010000234.1 1 2715 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000234.1 RefSeq region 1 2715 . + . ID=NZ_JAIKUA010000234.1:1..2715;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000234.1 RefSeq gene 212 1468 . + . ID=gene-L2557_RS14650;Name=L2557_RS14650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14650 NZ_JAIKUA010000234.1 Protein Homology CDS 212 1468 . + 0 ID=cds-WP_075672325.1;Parent=gene-L2557_RS14650;Dbxref=GenBank:WP_075672325.1;Name=WP_075672325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247342.1;locus_tag=L2557_RS14650;product=Zn-dependent hydrolase;protein_id=WP_075672325.1;transl_table=11 NZ_JAIKUA010000234.1 RefSeq gene 1462 2346 . - . ID=gene-L2557_RS14655;Name=L2557_RS14655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14655 NZ_JAIKUA010000234.1 Protein Homology CDS 1462 2346 . - 0 ID=cds-WP_075672323.1;Parent=gene-L2557_RS14655;Dbxref=GenBank:WP_075672323.1;Name=WP_075672323.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252429.1;locus_tag=L2557_RS14655;product=helix-turn-helix domain-containing protein;protein_id=WP_075672323.1;transl_table=11 ##sequence-region NZ_JAIKUA010000235.1 1 9259 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000235.1 RefSeq region 1 9259 . + . ID=NZ_JAIKUA010000235.1:1..9259;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000235.1 RefSeq pseudogene 1 118 . + . ID=gene-L2557_RS14660;Name=L2557_RS14660;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS14660;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000235.1 Protein Homology CDS 1 118 . + 1 ID=cds-L2557_RS14660;Parent=gene-L2557_RS14660;Note=cytochrome b556(FDO) component%3B heme containing%3B incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246538.1;locus_tag=L2557_RS14660;partial=true;product=formate dehydrogenase cytochrome b556 subunit;pseudo=true;start_range=.,1;transl_table=11 NZ_JAIKUA010000235.1 RefSeq gene 325 1245 . + . ID=gene-L2557_RS14665;Name=fdhE;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=L2557_RS14665 NZ_JAIKUA010000235.1 Protein Homology CDS 325 1245 . + 0 ID=cds-WP_075673731.1;Parent=gene-L2557_RS14665;Dbxref=GenBank:WP_075673731.1;Name=WP_075673731.1;gbkey=CDS;gene=fdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249961.1;locus_tag=L2557_RS14665;product=formate dehydrogenase accessory protein FdhE;protein_id=WP_075673731.1;transl_table=11 NZ_JAIKUA010000235.1 RefSeq gene 1261 2652 . + . ID=gene-L2557_RS14670;Name=selA;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=L2557_RS14670 NZ_JAIKUA010000235.1 Protein Homology CDS 1261 2652 . + 0 ID=cds-WP_099659549.1;Parent=gene-L2557_RS14670;Dbxref=GenBank:WP_099659549.1;Name=WP_099659549.1;Ontology_term=GO:0001514,GO:0004125,GO:0005737;gbkey=CDS;gene=selA;go_component=cytoplasm|0005737||IEA;go_function=L-seryl-tRNA(Sec) selenium transferase activity|0004125||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368627.1;locus_tag=L2557_RS14670;product=L-seryl-tRNA(Sec) selenium transferase;protein_id=WP_099659549.1;transl_table=11 NZ_JAIKUA010000235.1 RefSeq gene 2649 4511 . + . ID=gene-L2557_RS14675;Name=selB;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=L2557_RS14675 NZ_JAIKUA010000235.1 Protein Homology CDS 2649 4511 . + 0 ID=cds-WP_223673939.1;Parent=gene-L2557_RS14675;Dbxref=GenBank:WP_223673939.1;Name=WP_223673939.1;Ontology_term=GO:0001514,GO:0003723,GO:0003746,GO:0003924,GO:0005525,GO:0005737;gbkey=CDS;gene=selB;go_component=cytoplasm|0005737||IEA;go_function=RNA binding|0003723||IEA,translation elongation factor activity|0003746||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=selenocysteine incorporation|0001514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246541.1;locus_tag=L2557_RS14675;product=selenocysteine-specific translation elongation factor;protein_id=WP_223673939.1;transl_table=11 NZ_JAIKUA010000235.1 RefSeq gene 4621 6270 . + . ID=gene-L2557_RS14680;Name=L2557_RS14680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14680 NZ_JAIKUA010000235.1 Protein Homology CDS 4621 6270 . + 0 ID=cds-WP_235410150.1;Parent=gene-L2557_RS14680;Dbxref=GenBank:WP_235410150.1;Name=WP_235410150.1;Ontology_term=GO:0016772;gbkey=CDS;go_function=transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249790.1;locus_tag=L2557_RS14680;product=LTA synthase family protein;protein_id=WP_235410150.1;transl_table=11 NZ_JAIKUA010000235.1 RefSeq gene 6387 6815 . - . ID=gene-L2557_RS14685;Name=L2557_RS14685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14685 NZ_JAIKUA010000235.1 Protein Homology CDS 6387 6815 . - 0 ID=cds-WP_191901679.1;Parent=gene-L2557_RS14685;Dbxref=GenBank:WP_191901679.1;Name=WP_191901679.1;Ontology_term=GO:0015689;gbkey=CDS;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010681543.1;locus_tag=L2557_RS14685;product=TOBE domain-containing protein;protein_id=WP_191901679.1;transl_table=11 NZ_JAIKUA010000235.1 RefSeq gene 7130 8158 . - . ID=gene-L2557_RS14690;Name=L2557_RS14690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14690 NZ_JAIKUA010000235.1 Protein Homology CDS 7130 8158 . - 0 ID=cds-WP_075673736.1;Parent=gene-L2557_RS14690;Dbxref=GenBank:WP_075673736.1;Name=WP_075673736.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246544.1;locus_tag=L2557_RS14690;product=glycosyl hydrolase family 8;protein_id=WP_075673736.1;transl_table=11 NZ_JAIKUA010000235.1 RefSeq gene 8232 9191 . - . ID=gene-L2557_RS14695;Name=galU;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=L2557_RS14695 NZ_JAIKUA010000235.1 Protein Homology CDS 8232 9191 . - 0 ID=cds-WP_223673937.1;Parent=gene-L2557_RS14695;Dbxref=GenBank:WP_223673937.1;Name=WP_223673937.1;Ontology_term=GO:0006011,GO:0003983;gbkey=CDS;gene=galU;go_function=UTP:glucose-1-phosphate uridylyltransferase activity|0003983||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020455092.1;locus_tag=L2557_RS14695;product=UTP--glucose-1-phosphate uridylyltransferase GalU;protein_id=WP_223673937.1;transl_table=11 ##sequence-region NZ_JAIKUA010000236.1 1 9002 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000236.1 RefSeq region 1 9002 . + . ID=NZ_JAIKUA010000236.1:1..9002;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000236.1 RefSeq gene 276 515 . + . ID=gene-L2557_RS14700;Name=L2557_RS14700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14700 NZ_JAIKUA010000236.1 Protein Homology CDS 276 515 . + 0 ID=cds-WP_036913221.1;Parent=gene-L2557_RS14700;Dbxref=GenBank:WP_036913221.1;Name=WP_036913221.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248171.1;locus_tag=L2557_RS14700;product=Lpp/OprI family alanine-zipper lipoprotein;protein_id=WP_036913221.1;transl_table=11 NZ_JAIKUA010000236.1 RefSeq gene 601 1128 . - . ID=gene-L2557_RS14705;Name=L2557_RS14705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14705 NZ_JAIKUA010000236.1 GeneMarkS-2+ CDS 601 1128 . - 0 ID=cds-WP_235410151.1;Parent=gene-L2557_RS14705;Dbxref=GenBank:WP_235410151.1;Name=WP_235410151.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS14705;product=hypothetical protein;protein_id=WP_235410151.1;transl_table=11 NZ_JAIKUA010000236.1 RefSeq gene 1282 2199 . - . ID=gene-L2557_RS14710;Name=L2557_RS14710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14710 NZ_JAIKUA010000236.1 Protein Homology CDS 1282 2199 . - 0 ID=cds-WP_075673227.1;Parent=gene-L2557_RS14710;Dbxref=GenBank:WP_075673227.1;Name=WP_075673227.1;Ontology_term=GO:0016740;gbkey=CDS;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248173.1;locus_tag=L2557_RS14710;product=L%2CD-transpeptidase family protein;protein_id=WP_075673227.1;transl_table=11 NZ_JAIKUA010000236.1 RefSeq gene 2316 2744 . - . ID=gene-L2557_RS14715;Name=sufE;gbkey=Gene;gene=sufE;gene_biotype=protein_coding;locus_tag=L2557_RS14715 NZ_JAIKUA010000236.1 Protein Homology CDS 2316 2744 . - 0 ID=cds-WP_075673226.1;Parent=gene-L2557_RS14715;Dbxref=GenBank:WP_075673226.1;Name=WP_075673226.1;gbkey=CDS;gene=sufE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243158.1;locus_tag=L2557_RS14715;product=cysteine desulfuration protein SufE;protein_id=WP_075673226.1;transl_table=11 NZ_JAIKUA010000236.1 RefSeq gene 2766 4004 . - . ID=gene-L2557_RS14720;Name=sufS;gbkey=Gene;gene=sufS;gene_biotype=protein_coding;locus_tag=L2557_RS14720 NZ_JAIKUA010000236.1 Protein Homology CDS 2766 4004 . - 0 ID=cds-WP_180272998.1;Parent=gene-L2557_RS14720;Dbxref=GenBank:WP_180272998.1;Name=WP_180272998.1;Ontology_term=GO:0006534,GO:0030170,GO:0031071;gbkey=CDS;gene=sufS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658216.1;locus_tag=L2557_RS14720;product=cysteine desulfurase SufS;protein_id=WP_180272998.1;transl_table=11 NZ_JAIKUA010000236.1 RefSeq gene 4016 5323 . - . ID=gene-L2557_RS14725;Name=sufD;gbkey=Gene;gene=sufD;gene_biotype=protein_coding;locus_tag=L2557_RS14725 NZ_JAIKUA010000236.1 Protein Homology CDS 4016 5323 . - 0 ID=cds-WP_099659671.1;Parent=gene-L2557_RS14725;Dbxref=GenBank:WP_099659671.1;Name=WP_099659671.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufD;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250980.1;locus_tag=L2557_RS14725;product=Fe-S cluster assembly protein SufD;protein_id=WP_099659671.1;transl_table=11 NZ_JAIKUA010000236.1 RefSeq gene 5298 6044 . - . ID=gene-L2557_RS14730;Name=sufC;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=L2557_RS14730 NZ_JAIKUA010000236.1 Protein Homology CDS 5298 6044 . - 0 ID=cds-WP_075673223.1;Parent=gene-L2557_RS14730;Dbxref=GenBank:WP_075673223.1;Name=WP_075673223.1;Ontology_term=GO:0005524;gbkey=CDS;gene=sufC;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009112393.1;locus_tag=L2557_RS14730;product=Fe-S cluster assembly ATPase SufC;protein_id=WP_075673223.1;transl_table=11 NZ_JAIKUA010000236.1 RefSeq gene 6089 7591 . - . ID=gene-L2557_RS14735;Name=sufB;gbkey=Gene;gene=sufB;gene_biotype=protein_coding;locus_tag=L2557_RS14735 NZ_JAIKUA010000236.1 Protein Homology CDS 6089 7591 . - 0 ID=cds-WP_075673222.1;Parent=gene-L2557_RS14735;Dbxref=GenBank:WP_075673222.1;Name=WP_075673222.1;Ontology_term=GO:0016226;gbkey=CDS;gene=sufB;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243165.1;locus_tag=L2557_RS14735;product=Fe-S cluster assembly protein SufB;protein_id=WP_075673222.1;transl_table=11 NZ_JAIKUA010000236.1 RefSeq gene 7609 7977 . - . ID=gene-L2557_RS14740;Name=sufA;gbkey=Gene;gene=sufA;gene_biotype=protein_coding;locus_tag=L2557_RS14740 NZ_JAIKUA010000236.1 Protein Homology CDS 7609 7977 . - 0 ID=cds-WP_075673221.1;Parent=gene-L2557_RS14740;Dbxref=GenBank:WP_075673221.1;Name=WP_075673221.1;gbkey=CDS;gene=sufA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243167.1;locus_tag=L2557_RS14740;product=Fe-S cluster assembly scaffold SufA;protein_id=WP_075673221.1;transl_table=11 NZ_JAIKUA010000236.1 RefSeq gene 8399 9002 . - . ID=gene-L2557_RS14745;Name=L2557_RS14745;end_range=9002,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14745;partial=true NZ_JAIKUA010000236.1 Protein Homology CDS 8399 9002 . - 1 ID=cds-WP_268830892.1;Parent=gene-L2557_RS14745;Dbxref=GenBank:WP_268830892.1;Name=WP_268830892.1;end_range=9002,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250977.1;locus_tag=L2557_RS14745;partial=true;product=hypothetical protein;protein_id=WP_268830892.1;transl_table=11 ##sequence-region NZ_JAIKUA010000237.1 1 3084 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000237.1 RefSeq region 1 3084 . + . ID=NZ_JAIKUA010000237.1:1..3084;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000237.1 RefSeq gene 63 665 . + . ID=gene-L2557_RS14750;Name=L2557_RS14750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14750 NZ_JAIKUA010000237.1 Protein Homology CDS 63 665 . + 0 ID=cds-WP_075674385.1;Parent=gene-L2557_RS14750;Dbxref=GenBank:WP_075674385.1;Name=WP_075674385.1;Ontology_term=GO:0051920;gbkey=CDS;go_function=peroxiredoxin activity|0051920||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005160596.1;locus_tag=L2557_RS14750;product=peroxiredoxin C;protein_id=WP_075674385.1;transl_table=11 NZ_JAIKUA010000237.1 RefSeq gene 963 2723 . + . ID=gene-L2557_RS14755;Name=ggt;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=L2557_RS14755 NZ_JAIKUA010000237.1 Protein Homology CDS 963 2723 . + 0 ID=cds-WP_075674384.1;Parent=gene-L2557_RS14755;Dbxref=GenBank:WP_075674384.1;Name=WP_075674384.1;Ontology_term=GO:0006750,GO:0006751,GO:0036374;gbkey=CDS;gene=ggt;go_function=glutathione hydrolase activity|0036374||IEA;go_process=glutathione biosynthetic process|0006750||IEA,glutathione catabolic process|0006751||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252590.1;locus_tag=L2557_RS14755;product=gamma-glutamyltransferase;protein_id=WP_075674384.1;transl_table=11 ##sequence-region NZ_JAIKUA010000238.1 1 624 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000238.1 RefSeq region 1 624 . + . ID=NZ_JAIKUA010000238.1:1..624;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000238.1 RefSeq gene 1 624 . + . ID=gene-L2557_RS14760;Name=L2557_RS14760;end_range=624,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=L2557_RS14760;partial=true;start_range=.,1 NZ_JAIKUA010000238.1 cmsearch rRNA 1 624 . + . ID=rna-L2557_RS14760;Parent=gene-L2557_RS14760;Dbxref=RFAM:RF02541;end_range=624,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=L2557_RS14760;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JAIKUA010000238.1 cmsearch exon 1 624 . + . ID=exon-L2557_RS14760-1;Parent=rna-L2557_RS14760;Dbxref=RFAM:RF02541;end_range=624,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=L2557_RS14760;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JAIKUA010000239.1 1 2356 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000239.1 RefSeq region 1 2356 . + . ID=NZ_JAIKUA010000239.1:1..2356;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000239.1 RefSeq gene 1 1141 . - . ID=gene-L2557_RS14765;Name=L2557_RS14765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14765;partial=true;start_range=.,1 NZ_JAIKUA010000239.1 Protein Homology CDS 1 1141 . - 0 ID=cds-WP_235410153.1;Parent=gene-L2557_RS14765;Dbxref=GenBank:WP_235410153.1;Name=WP_235410153.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF016462.6;locus_tag=L2557_RS14765;partial=true;product=surface lipoprotein assembly modifier;protein_id=WP_235410153.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000239.1 RefSeq gene 1353 2126 . - . ID=gene-L2557_RS14770;Name=L2557_RS14770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14770 NZ_JAIKUA010000239.1 Protein Homology CDS 1353 2126 . - 0 ID=cds-WP_235410154.1;Parent=gene-L2557_RS14770;Dbxref=GenBank:WP_235410154.1;Name=WP_235410154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628727.1;locus_tag=L2557_RS14770;product=Slam-dependent surface lipoprotein;protein_id=WP_235410154.1;transl_table=11 ##sequence-region NZ_JAIKUA010000024.1 1 6279 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000024.1 RefSeq region 1 6279 . + . ID=NZ_JAIKUA010000024.1:1..6279;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000024.1 RefSeq gene 112 1113 . - . ID=gene-L2557_RS02680;Name=dppF;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=L2557_RS02680 NZ_JAIKUA010000024.1 Protein Homology CDS 112 1113 . - 0 ID=cds-WP_075671342.1;Parent=gene-L2557_RS02680;Dbxref=GenBank:WP_075671342.1;Name=WP_075671342.1;Ontology_term=GO:0042938,GO:0071916,GO:0016020;gbkey=CDS;gene=dppF;go_component=membrane|0016020||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534629.1;locus_tag=L2557_RS02680;product=dipeptide ABC transporter ATP-binding subunit DppF;protein_id=WP_075671342.1;transl_table=11 NZ_JAIKUA010000024.1 RefSeq gene 1106 2089 . - . ID=gene-L2557_RS02685;Name=dppD;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=L2557_RS02685 NZ_JAIKUA010000024.1 Protein Homology CDS 1106 2089 . - 0 ID=cds-WP_075671340.1;Parent=gene-L2557_RS02685;Dbxref=GenBank:WP_075671340.1;Name=WP_075671340.1;Ontology_term=GO:0015833,GO:0000166,GO:0005524;gbkey=CDS;gene=dppD;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA;go_process=peptide transport|0015833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368521.1;locus_tag=L2557_RS02685;product=dipeptide ABC transporter ATP-binding protein;protein_id=WP_075671340.1;transl_table=11 NZ_JAIKUA010000024.1 RefSeq gene 2102 3004 . - . ID=gene-L2557_RS02690;Name=dppC;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=L2557_RS02690 NZ_JAIKUA010000024.1 Protein Homology CDS 2102 3004 . - 0 ID=cds-WP_075671338.1;Parent=gene-L2557_RS02690;Dbxref=GenBank:WP_075671338.1;Name=WP_075671338.1;Ontology_term=GO:0055085;gbkey=CDS;gene=dppC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827112.1;locus_tag=L2557_RS02690;product=dipeptide ABC transporter permease DppC;protein_id=WP_075671338.1;transl_table=11 NZ_JAIKUA010000024.1 RefSeq gene 3016 4035 . - . ID=gene-L2557_RS02695;Name=dppB;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=L2557_RS02695 NZ_JAIKUA010000024.1 Protein Homology CDS 3016 4035 . - 0 ID=cds-WP_075671336.1;Parent=gene-L2557_RS02695;Dbxref=GenBank:WP_075671336.1;Name=WP_075671336.1;gbkey=CDS;gene=dppB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005133865.1;locus_tag=L2557_RS02695;product=dipeptide ABC transporter permease DppB;protein_id=WP_075671336.1;transl_table=11 NZ_JAIKUA010000024.1 RefSeq gene 4201 5808 . - . ID=gene-L2557_RS02700;Name=dppA;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=L2557_RS02700 NZ_JAIKUA010000024.1 Protein Homology CDS 4201 5808 . - 0 ID=cds-WP_075671334.1;Parent=gene-L2557_RS02700;Dbxref=GenBank:WP_075671334.1;Name=WP_075671334.1;Ontology_term=GO:0042938,GO:0071916,GO:0030288;gbkey=CDS;gene=dppA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=dipeptide transmembrane transporter activity|0071916||IEA;go_process=dipeptide transport|0042938||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628663.1;locus_tag=L2557_RS02700;product=dipeptide ABC transporter periplasmic-binding protein DppA;protein_id=WP_075671334.1;transl_table=11 ##sequence-region NZ_JAIKUA010000240.1 1 10226 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000240.1 RefSeq region 1 10226 . + . ID=NZ_JAIKUA010000240.1:1..10226;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000240.1 RefSeq pseudogene 1 279 . + . ID=gene-L2557_RS14775;Name=L2557_RS14775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS14775;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000240.1 Protein Homology CDS 1 279 . + 0 ID=cds-L2557_RS14775;Parent=gene-L2557_RS14775;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246827.1;locus_tag=L2557_RS14775;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAIKUA010000240.1 RefSeq gene 346 666 . - . ID=gene-L2557_RS14780;Name=L2557_RS14780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14780 NZ_JAIKUA010000240.1 Protein Homology CDS 346 666 . - 0 ID=cds-WP_075671318.1;Parent=gene-L2557_RS14780;Dbxref=GenBank:WP_075671318.1;Name=WP_075671318.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246828.1;locus_tag=L2557_RS14780;product=helix-turn-helix domain-containing protein;protein_id=WP_075671318.1;transl_table=11 NZ_JAIKUA010000240.1 RefSeq gene 659 1087 . - . ID=gene-L2557_RS14785;Name=L2557_RS14785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14785 NZ_JAIKUA010000240.1 Protein Homology CDS 659 1087 . - 0 ID=cds-WP_235410155.1;Parent=gene-L2557_RS14785;Dbxref=GenBank:WP_235410155.1;Name=WP_235410155.1;Ontology_term=GO:0004519,GO:0090729,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_function=endonuclease activity|0004519||IEA,toxin activity|0090729||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246829.1;locus_tag=L2557_RS14785;product=type II toxin-antitoxin system RelE/ParE family toxin;protein_id=WP_235410155.1;transl_table=11 NZ_JAIKUA010000240.1 RefSeq gene 1197 3269 . - . ID=gene-L2557_RS14790;Name=glyS;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=L2557_RS14790 NZ_JAIKUA010000240.1 Protein Homology CDS 1197 3269 . - 0 ID=cds-WP_075671322.1;Parent=gene-L2557_RS14790;Dbxref=GenBank:WP_075671322.1;Name=WP_075671322.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004543.1;locus_tag=L2557_RS14790;product=glycine--tRNA ligase subunit beta;protein_id=WP_075671322.1;transl_table=11 NZ_JAIKUA010000240.1 RefSeq gene 3279 4184 . - . ID=gene-L2557_RS14795;Name=glyQ;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=L2557_RS14795 NZ_JAIKUA010000240.1 Protein Homology CDS 3279 4184 . - 0 ID=cds-WP_004246832.1;Parent=gene-L2557_RS14795;Dbxref=GenBank:WP_004246832.1;Name=WP_004246832.1;Ontology_term=GO:0006426,GO:0000166,GO:0004820,GO:0005524,GO:0005737;gbkey=CDS;gene=glyQ;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,glycine-tRNA ligase activity|0004820||IEA,ATP binding|0005524||IEA;go_process=glycyl-tRNA aminoacylation|0006426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246832.1;locus_tag=L2557_RS14795;product=glycine--tRNA ligase subunit alpha;protein_id=WP_004246832.1;transl_table=11 NZ_JAIKUA010000240.1 RefSeq gene 4423 5007 . + . ID=gene-L2557_RS14800;Name=L2557_RS14800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14800 NZ_JAIKUA010000240.1 Protein Homology CDS 4423 5007 . + 0 ID=cds-WP_075671324.1;Parent=gene-L2557_RS14800;Dbxref=GenBank:WP_075671324.1;Name=WP_075671324.1;Ontology_term=GO:0006284,GO:0008725;gbkey=CDS;go_function=DNA-3-methyladenine glycosylase activity|0008725||IEA;go_process=base-excision repair|0006284||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368524.1;locus_tag=L2557_RS14800;product=DNA-3-methyladenine glycosylase I;protein_id=WP_075671324.1;transl_table=11 NZ_JAIKUA010000240.1 RefSeq gene 5178 6437 . + . ID=gene-L2557_RS14805;Name=L2557_RS14805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14805 NZ_JAIKUA010000240.1 Protein Homology CDS 5178 6437 . + 0 ID=cds-WP_109419306.1;Parent=gene-L2557_RS14805;Dbxref=GenBank:WP_109419306.1;Name=WP_109419306.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534617.1;locus_tag=L2557_RS14805;product=valine--pyruvate transaminase;protein_id=WP_109419306.1;transl_table=11 NZ_JAIKUA010000240.1 RefSeq gene 6703 8361 . - . ID=gene-L2557_RS14810;Name=L2557_RS14810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14810 NZ_JAIKUA010000240.1 Protein Homology CDS 6703 8361 . - 0 ID=cds-WP_075671328.1;Parent=gene-L2557_RS14810;Dbxref=GenBank:WP_075671328.1;Name=WP_075671328.1;Ontology_term=GO:0006813,GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005186793.1;locus_tag=L2557_RS14810;product=putative transporter;protein_id=WP_075671328.1;transl_table=11 NZ_JAIKUA010000240.1 RefSeq gene 8765 9088 . + . ID=gene-L2557_RS14815;Name=L2557_RS14815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14815 NZ_JAIKUA010000240.1 Protein Homology CDS 8765 9088 . + 0 ID=cds-WP_075671330.1;Parent=gene-L2557_RS14815;Dbxref=GenBank:WP_075671330.1;Name=WP_075671330.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020303920.1;locus_tag=L2557_RS14815;product=YceK/YidQ family lipoprotein;protein_id=WP_075671330.1;transl_table=11 NZ_JAIKUA010000240.1 RefSeq gene 9147 9452 . - . ID=gene-L2557_RS14820;Name=L2557_RS14820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14820 NZ_JAIKUA010000240.1 Protein Homology CDS 9147 9452 . - 0 ID=cds-WP_099659196.1;Parent=gene-L2557_RS14820;Dbxref=GenBank:WP_099659196.1;Name=WP_099659196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534621.1;locus_tag=L2557_RS14820;product=DUF5339 family protein;protein_id=WP_099659196.1;transl_table=11 NZ_JAIKUA010000240.1 RefSeq gene 9755 9831 . + . ID=gene-L2557_RS14825;Name=L2557_RS14825;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS14825 NZ_JAIKUA010000240.1 tRNAscan-SE tRNA 9755 9831 . + . ID=rna-L2557_RS14825;Parent=gene-L2557_RS14825;anticodon=(pos:9789..9791);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS14825;product=tRNA-Pro NZ_JAIKUA010000240.1 tRNAscan-SE exon 9755 9831 . + . ID=exon-L2557_RS14825-1;Parent=rna-L2557_RS14825;anticodon=(pos:9789..9791);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS14825;product=tRNA-Pro ##sequence-region NZ_JAIKUA010000241.1 1 1028 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000241.1 RefSeq region 1 1028 . + . ID=NZ_JAIKUA010000241.1:1..1028;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000241.1 RefSeq gene 1 494 . + . ID=gene-L2557_RS14830;Name=L2557_RS14830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14830;partial=true;start_range=.,1 NZ_JAIKUA010000241.1 Protein Homology CDS 1 494 . + 2 ID=cds-WP_235410156.1;Parent=gene-L2557_RS14830;Dbxref=GenBank:WP_235410156.1;Name=WP_235410156.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250338.1;locus_tag=L2557_RS14830;partial=true;product=LysR substrate-binding domain-containing protein;protein_id=WP_235410156.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000242.1 1 4656 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000242.1 RefSeq region 1 4656 . + . ID=NZ_JAIKUA010000242.1:1..4656;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000242.1 RefSeq gene 1 632 . + . ID=gene-L2557_RS14835;Name=cysE;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=L2557_RS14835;partial=true;start_range=.,1 NZ_JAIKUA010000242.1 Protein Homology CDS 1 632 . + 2 ID=cds-WP_235410157.1;Parent=gene-L2557_RS14835;Dbxref=GenBank:WP_235410157.1;Name=WP_235410157.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;gene=cysE;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013359486.1;locus_tag=L2557_RS14835;partial=true;product=serine O-acetyltransferase;protein_id=WP_235410157.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000242.1 RefSeq gene 632 1189 . + . ID=gene-L2557_RS14840;Name=L2557_RS14840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14840 NZ_JAIKUA010000242.1 Protein Homology CDS 632 1189 . + 0 ID=cds-WP_099659485.1;Parent=gene-L2557_RS14840;Dbxref=GenBank:WP_099659485.1;Name=WP_099659485.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534202.1;locus_tag=L2557_RS14840;product=serine acetyltransferase;protein_id=WP_099659485.1;transl_table=11 NZ_JAIKUA010000242.1 RefSeq gene 1261 1764 . - . ID=gene-L2557_RS14845;Name=trmL;gbkey=Gene;gene=trmL;gene_biotype=protein_coding;locus_tag=L2557_RS14845 NZ_JAIKUA010000242.1 Protein Homology CDS 1261 1764 . - 0 ID=cds-WP_036933349.1;Parent=gene-L2557_RS14845;Dbxref=GenBank:WP_036933349.1;Name=WP_036933349.1;Ontology_term=GO:0001510,GO:0008173;gbkey=CDS;gene=trmL;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA methylation|0001510||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004705053.1;locus_tag=L2557_RS14845;product=tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL;protein_id=WP_036933349.1;transl_table=11 NZ_JAIKUA010000242.1 RefSeq gene 1768 2718 . - . ID=gene-L2557_RS14850;Name=L2557_RS14850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14850 NZ_JAIKUA010000242.1 Protein Homology CDS 1768 2718 . - 0 ID=cds-WP_099659484.1;Parent=gene-L2557_RS14850;Dbxref=GenBank:WP_099659484.1;Name=WP_099659484.1;Ontology_term=GO:0016491,GO:0051287,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246448.1;locus_tag=L2557_RS14850;product=NAD-dependent epimerase/dehydratase family protein;protein_id=WP_099659484.1;transl_table=11 NZ_JAIKUA010000242.1 RefSeq gene 2732 3484 . - . ID=gene-L2557_RS14855;Name=L2557_RS14855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14855 NZ_JAIKUA010000242.1 Protein Homology CDS 2732 3484 . - 0 ID=cds-WP_099659483.1;Parent=gene-L2557_RS14855;Dbxref=GenBank:WP_099659483.1;Name=WP_099659483.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012990563.1;locus_tag=L2557_RS14855;product=glycosyltransferase family 2 protein;protein_id=WP_099659483.1;transl_table=11 NZ_JAIKUA010000242.1 RefSeq gene 3508 4656 . - . ID=gene-L2557_RS14860;Name=L2557_RS14860;end_range=4656,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14860;partial=true NZ_JAIKUA010000242.1 Protein Homology CDS 3508 4656 . - 0 ID=cds-WP_235410158.1;Parent=gene-L2557_RS14860;Dbxref=GenBank:WP_235410158.1;Name=WP_235410158.1;Ontology_term=GO:0000271,GO:0016616,GO:0051287;end_range=4656,.;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C NAD or NADP as acceptor|0016616||IEA,NAD binding|0051287||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227854.1;locus_tag=L2557_RS14860;partial=true;product=nucleotide sugar dehydrogenase;protein_id=WP_235410158.1;transl_table=11 ##sequence-region NZ_JAIKUA010000243.1 1 1337 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000243.1 RefSeq region 1 1337 . + . ID=NZ_JAIKUA010000243.1:1..1337;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000243.1 RefSeq pseudogene 1 1337 . + . ID=gene-L2557_RS14865;Name=L2557_RS14865;end_range=1337,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS14865;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000243.1 Protein Homology CDS 1 1337 . + 0 ID=cds-L2557_RS14865;Parent=gene-L2557_RS14865;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1337,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017412.6;locus_tag=L2557_RS14865;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000244.1 1 12660 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000244.1 RefSeq region 1 12660 . + . ID=NZ_JAIKUA010000244.1:1..12660;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000244.1 RefSeq gene 90 179 . - . ID=gene-L2557_RS14870;Name=L2557_RS14870;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS14870 NZ_JAIKUA010000244.1 tRNAscan-SE tRNA 90 179 . - . ID=rna-L2557_RS14870;Parent=gene-L2557_RS14870;anticodon=(pos:complement(143..145));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS14870;product=tRNA-Leu NZ_JAIKUA010000244.1 tRNAscan-SE exon 90 179 . - . ID=exon-L2557_RS14870-1;Parent=rna-L2557_RS14870;anticodon=(pos:complement(143..145));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS14870;product=tRNA-Leu NZ_JAIKUA010000244.1 RefSeq gene 238 582 . - . ID=gene-L2557_RS14875;Name=secG;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=L2557_RS14875 NZ_JAIKUA010000244.1 Protein Homology CDS 238 582 . - 0 ID=cds-WP_036914692.1;Parent=gene-L2557_RS14875;Dbxref=GenBank:WP_036914692.1;Name=WP_036914692.1;Ontology_term=GO:0015739,GO:0015136,GO:0016020;gbkey=CDS;gene=secG;go_component=membrane|0016020||IEA;go_function=sialic acid transmembrane transporter activity|0015136||IEA;go_process=sialic acid transport|0015739||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015670611.1;locus_tag=L2557_RS14875;product=preprotein translocase subunit SecG;protein_id=WP_036914692.1;transl_table=11 NZ_JAIKUA010000244.1 RefSeq gene 748 2085 . - . ID=gene-L2557_RS14880;Name=glmM;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=L2557_RS14880 NZ_JAIKUA010000244.1 Protein Homology CDS 748 2085 . - 0 ID=cds-WP_075673622.1;Parent=gene-L2557_RS14880;Dbxref=GenBank:WP_075673622.1;Name=WP_075673622.1;Ontology_term=GO:0005975,GO:0000287,GO:0008966,GO:0016868;gbkey=CDS;gene=glmM;go_function=magnesium ion binding|0000287||IEA,phosphoglucosamine mutase activity|0008966||IEA,intramolecular phosphotransferase activity|0016868||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148609.1;locus_tag=L2557_RS14880;product=phosphoglucosamine mutase;protein_id=WP_075673622.1;transl_table=11 NZ_JAIKUA010000244.1 RefSeq gene 2082 2924 . - . ID=gene-L2557_RS14885;Name=folP;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=L2557_RS14885 NZ_JAIKUA010000244.1 Protein Homology CDS 2082 2924 . - 0 ID=cds-WP_075673623.1;Parent=gene-L2557_RS14885;Dbxref=GenBank:WP_075673623.1;Name=WP_075673623.1;Ontology_term=GO:0004156;gbkey=CDS;gene=folP;go_function=dihydropteroate synthase activity|0004156||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246242.1;locus_tag=L2557_RS14885;product=dihydropteroate synthase;protein_id=WP_075673623.1;transl_table=11 NZ_JAIKUA010000244.1 RefSeq gene 3007 4953 . - . ID=gene-L2557_RS14890;Name=ftsH;gbkey=Gene;gene=ftsH;gene_biotype=protein_coding;locus_tag=L2557_RS14890 NZ_JAIKUA010000244.1 Protein Homology CDS 3007 4953 . - 0 ID=cds-WP_235410159.1;Parent=gene-L2557_RS14890;Dbxref=GenBank:WP_235410159.1;Name=WP_235410159.1;Ontology_term=GO:0006508,GO:0004176,GO:0004222;gbkey=CDS;gene=ftsH;go_function=ATP-dependent peptidase activity|0004176||IEA,metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249605.1;locus_tag=L2557_RS14890;product=ATP-dependent zinc metalloprotease FtsH;protein_id=WP_235410159.1;transl_table=11 NZ_JAIKUA010000244.1 RefSeq gene 5001 5630 . - . ID=gene-L2557_RS14895;Name=rlmE;gbkey=Gene;gene=rlmE;gene_biotype=protein_coding;locus_tag=L2557_RS14895 NZ_JAIKUA010000244.1 Protein Homology CDS 5001 5630 . - 0 ID=cds-WP_099660270.1;Parent=gene-L2557_RS14895;Dbxref=GenBank:WP_099660270.1;Name=WP_099660270.1;Ontology_term=GO:0001510,GO:0006364,GO:0016436;gbkey=CDS;gene=rlmE;go_function=rRNA (uridine) methyltransferase activity|0016436||IEA;go_process=RNA methylation|0001510||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005971510.1;locus_tag=L2557_RS14895;product=23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE;protein_id=WP_099660270.1;transl_table=11 NZ_JAIKUA010000244.1 RefSeq gene 5776 6069 . + . ID=gene-L2557_RS14900;Name=yhbY;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=L2557_RS14900 NZ_JAIKUA010000244.1 Protein Homology CDS 5776 6069 . + 0 ID=cds-WP_036914752.1;Parent=gene-L2557_RS14900;Dbxref=GenBank:WP_036914752.1;Name=WP_036914752.1;Ontology_term=GO:0003723;gbkey=CDS;gene=yhbY;go_function=RNA binding|0003723||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014833438.1;locus_tag=L2557_RS14900;product=ribosome assembly RNA-binding protein YhbY;protein_id=WP_036914752.1;transl_table=11 NZ_JAIKUA010000244.1 RefSeq gene 6191 6667 . - . ID=gene-L2557_RS14905;Name=greA;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=L2557_RS14905 NZ_JAIKUA010000244.1 Protein Homology CDS 6191 6667 . - 0 ID=cds-WP_075672816.1;Parent=gene-L2557_RS14905;Dbxref=GenBank:WP_075672816.1;Name=WP_075672816.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=greA;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462210.1;locus_tag=L2557_RS14905;product=transcription elongation factor GreA;protein_id=WP_075672816.1;transl_table=11 NZ_JAIKUA010000244.1 RefSeq gene 7077 8519 . + . ID=gene-L2557_RS14910;Name=dacB;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=L2557_RS14910 NZ_JAIKUA010000244.1 Protein Homology CDS 7077 8519 . + 0 ID=cds-WP_075672815.1;Parent=gene-L2557_RS14910;Dbxref=GenBank:WP_075672815.1;Name=WP_075672815.1;Ontology_term=GO:0006508,GO:0004185;gbkey=CDS;gene=dacB;go_function=serine-type carboxypeptidase activity|0004185||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249607.1;locus_tag=L2557_RS14910;product=serine-type D-Ala-D-Ala carboxypeptidase;protein_id=WP_075672815.1;transl_table=11 NZ_JAIKUA010000244.1 RefSeq gene 8605 9777 . - . ID=gene-L2557_RS14915;Name=cgtA;gbkey=Gene;gene=cgtA;gene_biotype=protein_coding;locus_tag=L2557_RS14915 NZ_JAIKUA010000244.1 Protein Homology CDS 8605 9777 . - 0 ID=cds-WP_075672814.1;Parent=gene-L2557_RS14915;Dbxref=GenBank:WP_075672814.1;Name=WP_075672814.1;Ontology_term=GO:0000287,GO:0003924,GO:0005525;gbkey=CDS;gene=cgtA;go_function=magnesium ion binding|0000287||IEA,GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253016.1;locus_tag=L2557_RS14915;product=Obg family GTPase CgtA;protein_id=WP_075672814.1;transl_table=11 NZ_JAIKUA010000244.1 RefSeq gene 9908 10165 . - . ID=gene-L2557_RS14920;Name=rpmA;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=L2557_RS14920 NZ_JAIKUA010000244.1 Protein Homology CDS 9908 10165 . - 0 ID=cds-WP_006535706.1;Parent=gene-L2557_RS14920;Dbxref=GenBank:WP_006535706.1;Name=WP_006535706.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmA;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004933559.1;locus_tag=L2557_RS14920;product=50S ribosomal protein L27;protein_id=WP_006535706.1;transl_table=11 NZ_JAIKUA010000244.1 RefSeq gene 10185 10493 . - . ID=gene-L2557_RS14925;Name=rplU;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=L2557_RS14925 NZ_JAIKUA010000244.1 Protein Homology CDS 10185 10493 . - 0 ID=cds-WP_006535707.1;Parent=gene-L2557_RS14925;Dbxref=GenBank:WP_006535707.1;Name=WP_006535707.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rplU;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845219.1;locus_tag=L2557_RS14925;product=50S ribosomal protein L21;protein_id=WP_006535707.1;transl_table=11 NZ_JAIKUA010000244.1 RefSeq gene 10757 11728 . + . ID=gene-L2557_RS14930;Name=ispB;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=L2557_RS14930 NZ_JAIKUA010000244.1 Protein Homology CDS 10757 11728 . + 0 ID=cds-WP_075672813.1;Parent=gene-L2557_RS14930;Dbxref=GenBank:WP_075672813.1;Name=WP_075672813.1;Ontology_term=GO:0008299;gbkey=CDS;gene=ispB;go_process=isoprenoid biosynthetic process|0008299||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535708.1;locus_tag=L2557_RS14930;product=octaprenyl diphosphate synthase;protein_id=WP_075672813.1;transl_table=11 NZ_JAIKUA010000244.1 RefSeq gene 11777 12193 . - . ID=gene-L2557_RS14935;Name=L2557_RS14935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14935 NZ_JAIKUA010000244.1 Protein Homology CDS 11777 12193 . - 0 ID=cds-WP_023583583.1;Parent=gene-L2557_RS14935;Dbxref=GenBank:WP_023583583.1;Name=WP_023583583.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246253.1;locus_tag=L2557_RS14935;product=DNA-binding protein;protein_id=WP_023583583.1;transl_table=11 NZ_JAIKUA010000244.1 RefSeq gene 12276 12626 . - . ID=gene-L2557_RS14940;Name=L2557_RS14940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14940 NZ_JAIKUA010000244.1 Protein Homology CDS 12276 12626 . - 0 ID=cds-WP_075672812.1;Parent=gene-L2557_RS14940;Dbxref=GenBank:WP_075672812.1;Name=WP_075672812.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246254.1;locus_tag=L2557_RS14940;product=DNA-binding protein;protein_id=WP_075672812.1;transl_table=11 ##sequence-region NZ_JAIKUA010000245.1 1 5407 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000245.1 RefSeq region 1 5407 . + . ID=NZ_JAIKUA010000245.1:1..5407;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000245.1 RefSeq gene 192 1442 . + . ID=gene-L2557_RS14945;Name=codB;gbkey=Gene;gene=codB;gene_biotype=protein_coding;locus_tag=L2557_RS14945 NZ_JAIKUA010000245.1 Protein Homology CDS 192 1442 . + 0 ID=cds-WP_109419794.1;Parent=gene-L2557_RS14945;Dbxref=GenBank:WP_109419794.1;Name=WP_109419794.1;Ontology_term=GO:0055085,GO:0015209,GO:0016020;gbkey=CDS;gene=codB;go_component=membrane|0016020||IEA;go_function=cytosine transmembrane transporter activity|0015209||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243213.1;locus_tag=L2557_RS14945;product=cytosine permease;protein_id=WP_109419794.1;transl_table=11 NZ_JAIKUA010000245.1 RefSeq gene 1432 2709 . + . ID=gene-L2557_RS14950;Name=L2557_RS14950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14950 NZ_JAIKUA010000245.1 Protein Homology CDS 1432 2709 . + 0 ID=cds-WP_223673600.1;Parent=gene-L2557_RS14950;Dbxref=GenBank:WP_223673600.1;Name=WP_223673600.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368001.1;locus_tag=L2557_RS14950;product=cytosine deaminase;protein_id=WP_223673600.1;transl_table=11 NZ_JAIKUA010000245.1 RefSeq gene 2950 3168 . + . ID=gene-L2557_RS14955;Name=L2557_RS14955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14955 NZ_JAIKUA010000245.1 GeneMarkS-2+ CDS 2950 3168 . + 0 ID=cds-WP_069369007.1;Parent=gene-L2557_RS14955;Dbxref=GenBank:WP_069369007.1;Name=WP_069369007.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS14955;product=hypothetical protein;protein_id=WP_069369007.1;transl_table=11 NZ_JAIKUA010000245.1 RefSeq gene 3171 3515 . + . ID=gene-L2557_RS14960;Name=L2557_RS14960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14960 NZ_JAIKUA010000245.1 Protein Homology CDS 3171 3515 . + 0 ID=cds-WP_083629117.1;Parent=gene-L2557_RS14960;Dbxref=GenBank:WP_083629117.1;Name=WP_083629117.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536478.1;locus_tag=L2557_RS14960;product=low molecular weight protein tyrosine phosphatase family protein;protein_id=WP_083629117.1;transl_table=11 NZ_JAIKUA010000245.1 RefSeq gene 3619 4083 . - . ID=gene-L2557_RS14965;Name=L2557_RS14965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14965 NZ_JAIKUA010000245.1 Protein Homology CDS 3619 4083 . - 0 ID=cds-WP_075673782.1;Parent=gene-L2557_RS14965;Dbxref=GenBank:WP_075673782.1;Name=WP_075673782.1;Ontology_term=GO:1904047;gbkey=CDS;go_function=S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248203.1;locus_tag=L2557_RS14965;product=HIT family protein;protein_id=WP_075673782.1;transl_table=11 NZ_JAIKUA010000245.1 RefSeq gene 4194 5171 . - . ID=gene-L2557_RS14970;Name=hemB;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=L2557_RS14970 NZ_JAIKUA010000245.1 Protein Homology CDS 4194 5171 . - 0 ID=cds-WP_072064069.1;Parent=gene-L2557_RS14970;Dbxref=GenBank:WP_072064069.1;Name=WP_072064069.1;Ontology_term=GO:0033014,GO:0004655;gbkey=CDS;gene=hemB;go_function=porphobilinogen synthase activity|0004655||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368000.1;locus_tag=L2557_RS14970;product=porphobilinogen synthase;protein_id=WP_072064069.1;transl_table=11 ##sequence-region NZ_JAIKUA010000246.1 1 816 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000246.1 RefSeq region 1 816 . + . ID=NZ_JAIKUA010000246.1:1..816;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000246.1 RefSeq gene 161 523 . - . ID=gene-L2557_RS14975;Name=L2557_RS14975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14975 NZ_JAIKUA010000246.1 Protein Homology CDS 161 523 . - 0 ID=cds-WP_099660324.1;Parent=gene-L2557_RS14975;Dbxref=GenBank:WP_099660324.1;Name=WP_099660324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248202.1;locus_tag=L2557_RS14975;product=hypothetical protein;protein_id=WP_099660324.1;transl_table=11 ##sequence-region NZ_JAIKUA010000247.1 1 941 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000247.1 RefSeq region 1 941 . + . ID=NZ_JAIKUA010000247.1:1..941;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000247.1 RefSeq gene 1 759 . - . ID=gene-L2557_RS14980;Name=L2557_RS14980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14980;partial=true;start_range=.,1 NZ_JAIKUA010000247.1 Protein Homology CDS 1 759 . - 0 ID=cds-WP_235410160.1;Parent=gene-L2557_RS14980;Dbxref=GenBank:WP_235410160.1;Name=WP_235410160.1;Ontology_term=GO:0032259,GO:0008168,GO:0008757,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=methylation|0032259||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820349.1;locus_tag=L2557_RS14980;partial=true;product=class I SAM-dependent methyltransferase;protein_id=WP_235410160.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000248.1 1 388 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000248.1 RefSeq region 1 388 . + . ID=NZ_JAIKUA010000248.1:1..388;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000248.1 RefSeq pseudogene 1 388 . + . ID=gene-L2557_RS14985;Name=L2557_RS14985;end_range=388,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS14985;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000248.1 Protein Homology CDS 1 388 . + 1 ID=cds-L2557_RS14985;Parent=gene-L2557_RS14985;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=388,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845874.1;locus_tag=L2557_RS14985;partial=true;product=electron transport complex subunit RsxC;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000249.1 1 4533 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000249.1 RefSeq region 1 4533 . + . ID=NZ_JAIKUA010000249.1:1..4533;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000249.1 RefSeq gene 1 409 . + . ID=gene-L2557_RS14990;Name=L2557_RS14990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS14990;partial=true;start_range=.,1 NZ_JAIKUA010000249.1 GeneMarkS-2+ CDS 1 409 . + 1 ID=cds-WP_235410161.1;Parent=gene-L2557_RS14990;Dbxref=GenBank:WP_235410161.1;Name=WP_235410161.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS14990;partial=true;product=hypothetical protein;protein_id=WP_235410161.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000249.1 RefSeq gene 452 1033 . - . ID=gene-L2557_RS14995;Name=yfbR;gbkey=Gene;gene=yfbR;gene_biotype=protein_coding;locus_tag=L2557_RS14995 NZ_JAIKUA010000249.1 Protein Homology CDS 452 1033 . - 0 ID=cds-WP_075670630.1;Parent=gene-L2557_RS14995;Dbxref=GenBank:WP_075670630.1;Name=WP_075670630.1;Ontology_term=GO:0002953;gbkey=CDS;gene=yfbR;go_function=5'-deoxynucleotidase activity|0002953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243705.1;locus_tag=L2557_RS14995;product=5'-deoxynucleotidase;protein_id=WP_075670630.1;transl_table=11 NZ_JAIKUA010000249.1 RefSeq gene 1170 2384 . - . ID=gene-L2557_RS15000;Name=L2557_RS15000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15000 NZ_JAIKUA010000249.1 Protein Homology CDS 1170 2384 . - 0 ID=cds-WP_075670632.1;Parent=gene-L2557_RS15000;Dbxref=GenBank:WP_075670632.1;Name=WP_075670632.1;Ontology_term=GO:0009058,GO:0003824,GO:0030170;gbkey=CDS;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461273.1;locus_tag=L2557_RS15000;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_075670632.1;transl_table=11 NZ_JAIKUA010000249.1 RefSeq gene 3246 4163 . + . ID=gene-L2557_RS15005;Name=hexA;gbkey=Gene;gene=hexA;gene_biotype=protein_coding;locus_tag=L2557_RS15005 NZ_JAIKUA010000249.1 Protein Homology CDS 3246 4163 . + 0 ID=cds-WP_075670634.1;Parent=gene-L2557_RS15005;Dbxref=GenBank:WP_075670634.1;Name=WP_075670634.1;gbkey=CDS;gene=hexA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243703.1;locus_tag=L2557_RS15005;product=transcriptional regulator HexA;protein_id=WP_075670634.1;transl_table=11 ##sequence-region NZ_JAIKUA010000025.1 1 18533 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000025.1 RefSeq region 1 18533 . + . ID=NZ_JAIKUA010000025.1:1..18533;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000025.1 RefSeq gene 298 1671 . + . ID=gene-L2557_RS02705;Name=L2557_RS02705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02705 NZ_JAIKUA010000025.1 Protein Homology CDS 298 1671 . + 0 ID=cds-WP_235409778.1;Parent=gene-L2557_RS02705;Dbxref=GenBank:WP_235409778.1;Name=WP_235409778.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248292.1;locus_tag=L2557_RS02705;product=MFS transporter;protein_id=WP_235409778.1;transl_table=11 NZ_JAIKUA010000025.1 RefSeq gene 1821 3287 . - . ID=gene-L2557_RS02710;Name=dtpA;gbkey=Gene;gene=dtpA;gene_biotype=protein_coding;locus_tag=L2557_RS02710 NZ_JAIKUA010000025.1 Protein Homology CDS 1821 3287 . - 0 ID=cds-WP_075671918.1;Parent=gene-L2557_RS02710;Dbxref=GenBank:WP_075671918.1;Name=WP_075671918.1;Ontology_term=GO:0015833,GO:0055085,GO:1904680,GO:0016020;gbkey=CDS;gene=dtpA;go_component=membrane|0016020||IEA;go_function=peptide transmembrane transporter activity|1904680||IEA;go_process=peptide transport|0015833||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533065.1;locus_tag=L2557_RS02710;product=dipeptide/tripeptide permease DtpA;protein_id=WP_075671918.1;transl_table=11 NZ_JAIKUA010000025.1 RefSeq gene 3849 5084 . + . ID=gene-L2557_RS02715;Name=L2557_RS02715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02715 NZ_JAIKUA010000025.1 Protein Homology CDS 3849 5084 . + 0 ID=cds-WP_075671920.1;Parent=gene-L2557_RS02715;Dbxref=GenBank:WP_075671920.1;Name=WP_075671920.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243444.1;locus_tag=L2557_RS02715;product=MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit;protein_id=WP_075671920.1;transl_table=11 NZ_JAIKUA010000025.1 RefSeq gene 5084 8215 . + . ID=gene-L2557_RS02720;Name=L2557_RS02720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02720 NZ_JAIKUA010000025.1 Protein Homology CDS 5084 8215 . + 0 ID=cds-WP_159364082.1;Parent=gene-L2557_RS02720;Dbxref=GenBank:WP_159364082.1;Name=WP_159364082.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243446.1;locus_tag=L2557_RS02720;product=MdtB/MuxB family multidrug efflux RND transporter permease subunit;protein_id=WP_159364082.1;transl_table=11 NZ_JAIKUA010000025.1 RefSeq gene 8212 11295 . + . ID=gene-L2557_RS02725;Name=mdtC;gbkey=Gene;gene=mdtC;gene_biotype=protein_coding;locus_tag=L2557_RS02725 NZ_JAIKUA010000025.1 Protein Homology CDS 8212 11295 . + 0 ID=cds-WP_075671924.1;Parent=gene-L2557_RS02725;Dbxref=GenBank:WP_075671924.1;Name=WP_075671924.1;Ontology_term=GO:0055085;gbkey=CDS;gene=mdtC;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243447.1;locus_tag=L2557_RS02725;product=multidrug efflux RND transporter permease subunit MdtC;protein_id=WP_075671924.1;transl_table=11 NZ_JAIKUA010000025.1 RefSeq gene 11292 12668 . + . ID=gene-L2557_RS02730;Name=baeS;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=L2557_RS02730 NZ_JAIKUA010000025.1 Protein Homology CDS 11292 12668 . + 0 ID=cds-WP_099660597.1;Parent=gene-L2557_RS02730;Dbxref=GenBank:WP_099660597.1;Name=WP_099660597.1;Ontology_term=GO:0007165,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=baeS;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243448.1;locus_tag=L2557_RS02730;product=envelope stress sensor histidine kinase BaeS;protein_id=WP_099660597.1;transl_table=11 NZ_JAIKUA010000025.1 RefSeq gene 12692 13399 . + . ID=gene-L2557_RS02735;Name=baeR;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=L2557_RS02735 NZ_JAIKUA010000025.1 Protein Homology CDS 12692 13399 . + 0 ID=cds-WP_075674054.1;Parent=gene-L2557_RS02735;Dbxref=GenBank:WP_075674054.1;Name=WP_075674054.1;Ontology_term=GO:0000160,GO:2000142,GO:0003700;gbkey=CDS;gene=baeR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription initiation|2000142||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243449.1;locus_tag=L2557_RS02735;product=envelope stress response regulator BaeR;protein_id=WP_075674054.1;transl_table=11 NZ_JAIKUA010000025.1 RefSeq gene 13520 14899 . + . ID=gene-L2557_RS02740;Name=trhP;gbkey=Gene;gene=trhP;gene_biotype=protein_coding;gene_synonym=yegQ;locus_tag=L2557_RS02740 NZ_JAIKUA010000025.1 Protein Homology CDS 13520 14899 . + 0 ID=cds-WP_075674055.1;Parent=gene-L2557_RS02740;Dbxref=GenBank:WP_075674055.1;Name=WP_075674055.1;Ontology_term=GO:0006400;gbkey=CDS;gene=trhP;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368042.1;locus_tag=L2557_RS02740;product=prephenate-dependent tRNA uridine(34) hydroxylase TrhP;protein_id=WP_075674055.1;transl_table=11 NZ_JAIKUA010000025.1 RefSeq gene 15196 16089 . + . ID=gene-L2557_RS02745;Name=yegS;gbkey=Gene;gene=yegS;gene_biotype=protein_coding;locus_tag=L2557_RS02745 NZ_JAIKUA010000025.1 Protein Homology CDS 15196 16089 . + 0 ID=cds-WP_099660598.1;Parent=gene-L2557_RS02745;Dbxref=GenBank:WP_099660598.1;Name=WP_099660598.1;Ontology_term=GO:0001727,GO:0046872;gbkey=CDS;gene=yegS;go_function=lipid kinase activity|0001727||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243451.1;locus_tag=L2557_RS02745;product=lipid kinase YegS;protein_id=WP_099660598.1;transl_table=11 NZ_JAIKUA010000025.1 RefSeq gene 16139 17188 . + . ID=gene-L2557_RS02750;Name=fbaB;gbkey=Gene;gene=fbaB;gene_biotype=protein_coding;locus_tag=L2557_RS02750 NZ_JAIKUA010000025.1 Protein Homology CDS 16139 17188 . + 0 ID=cds-WP_006533078.1;Parent=gene-L2557_RS02750;Dbxref=GenBank:WP_006533078.1;Name=WP_006533078.1;Ontology_term=GO:0004332;gbkey=CDS;gene=fbaB;go_function=fructose-bisphosphate aldolase activity|0004332||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820796.1;locus_tag=L2557_RS02750;product=class I fructose-bisphosphate aldolase;protein_id=WP_006533078.1;transl_table=11 NZ_JAIKUA010000025.1 RefSeq gene 17252 18049 . - . ID=gene-L2557_RS02755;Name=thiD;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=L2557_RS02755 NZ_JAIKUA010000025.1 Protein Homology CDS 17252 18049 . - 0 ID=cds-WP_075674057.1;Parent=gene-L2557_RS02755;Dbxref=GenBank:WP_075674057.1;Name=WP_075674057.1;Ontology_term=GO:0009228,GO:0008902,GO:0008972;gbkey=CDS;gene=thiD;go_function=hydroxymethylpyrimidine kinase activity|0008902||IEA,phosphomethylpyrimidine kinase activity|0008972||IEA;go_process=thiamine biosynthetic process|0009228||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250817.1;locus_tag=L2557_RS02755;product=bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase;protein_id=WP_075674057.1;transl_table=11 NZ_JAIKUA010000025.1 cmsearch riboswitch 18101 18189 . - . ID=id-NZ_JAIKUA010000025.1:18101..18189;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch ##sequence-region NZ_JAIKUA010000250.1 1 399 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000250.1 RefSeq region 1 399 . + . ID=NZ_JAIKUA010000250.1:1..399;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000251.1 1 311 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000251.1 RefSeq region 1 311 . + . ID=NZ_JAIKUA010000251.1:1..311;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000251.1 RefSeq gene 1 311 . + . ID=gene-L2557_RS15010;Name=L2557_RS15010;end_range=311,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15010;partial=true;start_range=.,1 NZ_JAIKUA010000251.1 Protein Homology CDS 1 311 . + 1 ID=cds-WP_459559365.1;Parent=gene-L2557_RS15010;Dbxref=GenBank:WP_459559365.1;Name=WP_459559365.1;end_range=311,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049694.1;locus_tag=L2557_RS15010;partial=true;product=T6SS immunity protein Tli3 family protein;protein_id=WP_459559365.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000252.1 1 7469 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000252.1 RefSeq region 1 7469 . + . ID=NZ_JAIKUA010000252.1:1..7469;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000252.1 RefSeq gene 1 659 . + . ID=gene-L2557_RS15015;Name=L2557_RS15015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15015;partial=true;start_range=.,1 NZ_JAIKUA010000252.1 Protein Homology CDS 1 659 . + 2 ID=cds-WP_235410162.1;Parent=gene-L2557_RS15015;Dbxref=GenBank:WP_235410162.1;Name=WP_235410162.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023580.6;locus_tag=L2557_RS15015;partial=true;product=DUF3592 domain-containing protein;protein_id=WP_235410162.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000252.1 RefSeq gene 872 1483 . + . ID=gene-L2557_RS15020;Name=gstA;gbkey=Gene;gene=gstA;gene_biotype=protein_coding;locus_tag=L2557_RS15020 NZ_JAIKUA010000252.1 Protein Homology CDS 872 1483 . + 0 ID=cds-WP_075672181.1;Parent=gene-L2557_RS15020;Dbxref=GenBank:WP_075672181.1;Name=WP_075672181.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=gstA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537028.1;locus_tag=L2557_RS15020;product=glutathione transferase GstA;protein_id=WP_075672181.1;transl_table=11 NZ_JAIKUA010000252.1 RefSeq gene 1552 2421 . - . ID=gene-L2557_RS15025;Name=pdxY;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=L2557_RS15025 NZ_JAIKUA010000252.1 Protein Homology CDS 1552 2421 . - 0 ID=cds-WP_075672183.1;Parent=gene-L2557_RS15025;Dbxref=GenBank:WP_075672183.1;Name=WP_075672183.1;Ontology_term=GO:0009443,GO:0008478;gbkey=CDS;gene=pdxY;go_function=pyridoxal kinase activity|0008478||IEA;go_process=pyridoxal 5'-phosphate salvage|0009443||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243115.1;locus_tag=L2557_RS15025;product=pyridoxal kinase PdxY;protein_id=WP_075672183.1;transl_table=11 NZ_JAIKUA010000252.1 RefSeq gene 2544 3818 . - . ID=gene-L2557_RS15030;Name=tyrS;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=L2557_RS15030 NZ_JAIKUA010000252.1 Protein Homology CDS 2544 3818 . - 0 ID=cds-WP_036913193.1;Parent=gene-L2557_RS15030;Dbxref=GenBank:WP_036913193.1;Name=WP_036913193.1;Ontology_term=GO:0006437,GO:0000166,GO:0004831,GO:0005524;gbkey=CDS;gene=tyrS;go_function=nucleotide binding|0000166||IEA,tyrosine-tRNA ligase activity|0004831||IEA,ATP binding|0005524||IEA;go_process=tyrosyl-tRNA aminoacylation|0006437||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460412.1;locus_tag=L2557_RS15030;product=tyrosine--tRNA ligase;protein_id=WP_036913193.1;transl_table=11 NZ_JAIKUA010000252.1 RefSeq gene 3951 4604 . - . ID=gene-L2557_RS15035;Name=pdxH;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=L2557_RS15035 NZ_JAIKUA010000252.1 Protein Homology CDS 3951 4604 . - 0 ID=cds-WP_069369294.1;Parent=gene-L2557_RS15035;Dbxref=GenBank:WP_069369294.1;Name=WP_069369294.1;Ontology_term=GO:0008615,GO:0004733,GO:0010181;gbkey=CDS;gene=pdxH;go_function=pyridoxamine phosphate oxidase activity|0004733||IEA,FMN binding|0010181||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012105041.1;locus_tag=L2557_RS15035;product=pyridoxamine 5'-phosphate oxidase;protein_id=WP_069369294.1;transl_table=11 NZ_JAIKUA010000252.1 RefSeq gene 4648 5760 . - . ID=gene-L2557_RS15040;Name=anmK;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;locus_tag=L2557_RS15040 NZ_JAIKUA010000252.1 Protein Homology CDS 4648 5760 . - 0 ID=cds-WP_075672185.1;Parent=gene-L2557_RS15040;Dbxref=GenBank:WP_075672185.1;Name=WP_075672185.1;gbkey=CDS;gene=anmK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243120.1;locus_tag=L2557_RS15040;product=anhydro-N-acetylmuramic acid kinase;protein_id=WP_075672185.1;transl_table=11 NZ_JAIKUA010000252.1 RefSeq gene 5982 6449 . + . ID=gene-L2557_RS15045;Name=L2557_RS15045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15045 NZ_JAIKUA010000252.1 Protein Homology CDS 5982 6449 . + 0 ID=cds-WP_075672187.1;Parent=gene-L2557_RS15045;Dbxref=GenBank:WP_075672187.1;Name=WP_075672187.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537034.1;locus_tag=L2557_RS15045;product=outer membrane lipoprotein;protein_id=WP_075672187.1;transl_table=11 NZ_JAIKUA010000252.1 RefSeq gene 6766 7194 . - . ID=gene-L2557_RS15050;Name=slyA;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=L2557_RS15050 NZ_JAIKUA010000252.1 Protein Homology CDS 6766 7194 . - 0 ID=cds-WP_235410163.1;Parent=gene-L2557_RS15050;Dbxref=GenBank:WP_235410163.1;Name=WP_235410163.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=slyA;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243123.1;locus_tag=L2557_RS15050;product=transcriptional regulator SlyA;protein_id=WP_235410163.1;transl_table=11 ##sequence-region NZ_JAIKUA010000253.1 1 12531 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000253.1 RefSeq region 1 12531 . + . ID=NZ_JAIKUA010000253.1:1..12531;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000253.1 RefSeq gene 1 808 . + . ID=gene-L2557_RS15055;Name=L2557_RS15055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15055;partial=true;start_range=.,1 NZ_JAIKUA010000253.1 Protein Homology CDS 1 808 . + 1 ID=cds-WP_235410164.1;Parent=gene-L2557_RS15055;Dbxref=GenBank:WP_235410164.1;Name=WP_235410164.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252518.1;locus_tag=L2557_RS15055;partial=true;product=EfeM/EfeO family lipoprotein;protein_id=WP_235410164.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000253.1 RefSeq gene 798 2063 . + . ID=gene-L2557_RS15060;Name=efeB;gbkey=Gene;gene=efeB;gene_biotype=protein_coding;locus_tag=L2557_RS15060 NZ_JAIKUA010000253.1 Protein Homology CDS 798 2063 . + 0 ID=cds-WP_099659944.1;Parent=gene-L2557_RS15060;Dbxref=GenBank:WP_099659944.1;Name=WP_099659944.1;Ontology_term=GO:0033212,GO:0004601,GO:0020037;gbkey=CDS;gene=efeB;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;go_process=iron import into cell|0033212||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367493.1;locus_tag=L2557_RS15060;product=iron uptake transporter deferrochelatase/peroxidase subunit;protein_id=WP_099659944.1;transl_table=11 NZ_JAIKUA010000253.1 RefSeq gene 2125 2814 . - . ID=gene-L2557_RS15065;Name=L2557_RS15065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15065 NZ_JAIKUA010000253.1 Protein Homology CDS 2125 2814 . - 0 ID=cds-WP_075674131.1;Parent=gene-L2557_RS15065;Dbxref=GenBank:WP_075674131.1;Name=WP_075674131.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245028.1;locus_tag=L2557_RS15065;product=helix-turn-helix domain-containing protein;protein_id=WP_075674131.1;transl_table=11 NZ_JAIKUA010000253.1 RefSeq gene 3046 5382 . + . ID=gene-L2557_RS15070;Name=L2557_RS15070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15070 NZ_JAIKUA010000253.1 Protein Homology CDS 3046 5382 . + 0 ID=cds-WP_075674130.1;Parent=gene-L2557_RS15070;Dbxref=GenBank:WP_075674130.1;Name=WP_075674130.1;Ontology_term=GO:0016491,GO:0043546;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367492.1;locus_tag=L2557_RS15070;product=molybdopterin-containing oxidoreductase family protein;protein_id=WP_075674130.1;transl_table=11 NZ_JAIKUA010000253.1 RefSeq gene 5385 5936 . + . ID=gene-L2557_RS15075;Name=L2557_RS15075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15075 NZ_JAIKUA010000253.1 Protein Homology CDS 5385 5936 . + 0 ID=cds-WP_072070981.1;Parent=gene-L2557_RS15075;Dbxref=GenBank:WP_072070981.1;Name=WP_072070981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245030.1;locus_tag=L2557_RS15075;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_072070981.1;transl_table=11 NZ_JAIKUA010000253.1 RefSeq gene 5939 6757 . + . ID=gene-L2557_RS15080;Name=L2557_RS15080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15080 NZ_JAIKUA010000253.1 Protein Homology CDS 5939 6757 . + 0 ID=cds-WP_099659945.1;Parent=gene-L2557_RS15080;Dbxref=GenBank:WP_099659945.1;Name=WP_099659945.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245031.1;locus_tag=L2557_RS15080;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_099659945.1;transl_table=11 NZ_JAIKUA010000253.1 RefSeq gene 7044 7604 . + . ID=gene-L2557_RS15085;Name=L2557_RS15085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15085 NZ_JAIKUA010000253.1 Protein Homology CDS 7044 7604 . + 0 ID=cds-WP_075674128.1;Parent=gene-L2557_RS15085;Dbxref=GenBank:WP_075674128.1;Name=WP_075674128.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245032.1;locus_tag=L2557_RS15085;product=LemA family protein;protein_id=WP_075674128.1;transl_table=11 NZ_JAIKUA010000253.1 RefSeq gene 7681 8646 . + . ID=gene-L2557_RS15090;Name=htpX;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=L2557_RS15090 NZ_JAIKUA010000253.1 Protein Homology CDS 7681 8646 . + 0 ID=cds-WP_075674127.1;Parent=gene-L2557_RS15090;Dbxref=GenBank:WP_075674127.1;Name=WP_075674127.1;gbkey=CDS;gene=htpX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247268.1;locus_tag=L2557_RS15090;product=zinc metalloprotease HtpX;protein_id=WP_075674127.1;transl_table=11 NZ_JAIKUA010000253.1 RefSeq gene 8747 8929 . - . ID=gene-L2557_RS15095;Name=L2557_RS15095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15095 NZ_JAIKUA010000253.1 Protein Homology CDS 8747 8929 . - 0 ID=cds-WP_075674126.1;Parent=gene-L2557_RS15095;Dbxref=GenBank:WP_075674126.1;Name=WP_075674126.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245034.1;locus_tag=L2557_RS15095;product=DUF2526 family protein;protein_id=WP_075674126.1;transl_table=11 NZ_JAIKUA010000253.1 RefSeq gene 9017 10249 . - . ID=gene-L2557_RS15100;Name=L2557_RS15100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15100 NZ_JAIKUA010000253.1 Protein Homology CDS 9017 10249 . - 0 ID=cds-WP_075674125.1;Parent=gene-L2557_RS15100;Dbxref=GenBank:WP_075674125.1;Name=WP_075674125.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367491.1;locus_tag=L2557_RS15100;product=MFS transporter;protein_id=WP_075674125.1;transl_table=11 NZ_JAIKUA010000253.1 RefSeq gene 10436 11206 . - . ID=gene-L2557_RS15105;Name=L2557_RS15105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15105 NZ_JAIKUA010000253.1 Protein Homology CDS 10436 11206 . - 0 ID=cds-WP_075674124.1;Parent=gene-L2557_RS15105;Dbxref=GenBank:WP_075674124.1;Name=WP_075674124.1;Ontology_term=GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209344.1;locus_tag=L2557_RS15105;product=ABC transporter permease;protein_id=WP_075674124.1;transl_table=11 NZ_JAIKUA010000253.1 RefSeq gene 11203 12138 . - . ID=gene-L2557_RS15110;Name=L2557_RS15110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15110 NZ_JAIKUA010000253.1 Protein Homology CDS 11203 12138 . - 0 ID=cds-WP_075674123.1;Parent=gene-L2557_RS15110;Dbxref=GenBank:WP_075674123.1;Name=WP_075674123.1;Ontology_term=GO:0005524,GO:0016887,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827770.1;locus_tag=L2557_RS15110;product=ABC transporter ATP-binding protein;protein_id=WP_075674123.1;transl_table=11 ##sequence-region NZ_JAIKUA010000254.1 1 19026 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000254.1 RefSeq region 1 19026 . + . ID=NZ_JAIKUA010000254.1:1..19026;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000254.1 RefSeq gene 154 1701 . + . ID=gene-L2557_RS15115;Name=L2557_RS15115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15115 NZ_JAIKUA010000254.1 Protein Homology CDS 154 1701 . + 0 ID=cds-WP_075673266.1;Parent=gene-L2557_RS15115;Dbxref=GenBank:WP_075673266.1;Name=WP_075673266.1;Ontology_term=GO:1902604,GO:0015558;gbkey=CDS;go_function=secondary active p-aminobenzoyl-glutamate transmembrane transporter activity|0015558||IEA;go_process=p-aminobenzoyl-glutamate transmembrane transport|1902604||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813338.1;locus_tag=L2557_RS15115;product=AbgT family transporter;protein_id=WP_075673266.1;transl_table=11 NZ_JAIKUA010000254.1 RefSeq gene 1743 2978 . + . ID=gene-L2557_RS15120;Name=pepT;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=L2557_RS15120 NZ_JAIKUA010000254.1 Protein Homology CDS 1743 2978 . + 0 ID=cds-WP_075673267.1;Parent=gene-L2557_RS15120;Dbxref=GenBank:WP_075673267.1;Name=WP_075673267.1;Ontology_term=GO:0006508,GO:0008270,GO:0045148;gbkey=CDS;gene=pepT;go_function=zinc ion binding|0008270||IEA,tripeptide aminopeptidase activity|0045148||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004918790.1;locus_tag=L2557_RS15120;product=peptidase T;protein_id=WP_075673267.1;transl_table=11 NZ_JAIKUA010000254.1 RefSeq gene 3052 5466 . - . ID=gene-L2557_RS15125;Name=gyrB;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=L2557_RS15125 NZ_JAIKUA010000254.1 Protein Homology CDS 3052 5466 . - 0 ID=cds-WP_075673268.1;Parent=gene-L2557_RS15125;Dbxref=GenBank:WP_075673268.1;Name=WP_075673268.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=gyrB;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312661.1;locus_tag=L2557_RS15125;product=DNA topoisomerase (ATP-hydrolyzing) subunit B;protein_id=WP_075673268.1;transl_table=11 NZ_JAIKUA010000254.1 RefSeq gene 5487 6575 . - . ID=gene-L2557_RS15130;Name=recF;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=L2557_RS15130 NZ_JAIKUA010000254.1 Protein Homology CDS 5487 6575 . - 0 ID=cds-WP_075673269.1;Parent=gene-L2557_RS15130;Dbxref=GenBank:WP_075673269.1;Name=WP_075673269.1;Note=All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair.;Ontology_term=GO:0006260,GO:0006281,GO:0006310,GO:0009432,GO:0003697,GO:0005524;gbkey=CDS;gene=recF;go_function=single-stranded DNA binding|0003697||IEA,ATP binding|0005524||IEA;go_process=DNA replication|0006260||IEA,DNA repair|0006281||IEA,DNA recombination|0006310||IEA,SOS response|0009432||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246505.1;locus_tag=L2557_RS15130;product=DNA replication/repair protein RecF;protein_id=WP_075673269.1;transl_table=11 NZ_JAIKUA010000254.1 RefSeq gene 6587 7690 . - . ID=gene-L2557_RS15135;Name=dnaN;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=L2557_RS15135 NZ_JAIKUA010000254.1 Protein Homology CDS 6587 7690 . - 0 ID=cds-WP_075673270.1;Parent=gene-L2557_RS15135;Dbxref=GenBank:WP_075673270.1;Name=WP_075673270.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887,GO:0009360;gbkey=CDS;gene=dnaN;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006177590.1;locus_tag=L2557_RS15135;product=DNA polymerase III subunit beta;protein_id=WP_075673270.1;transl_table=11 NZ_JAIKUA010000254.1 RefSeq gene 7695 9095 . - . ID=gene-L2557_RS15140;Name=dnaA;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=L2557_RS15140 NZ_JAIKUA010000254.1 Protein Homology CDS 7695 9095 . - 0 ID=cds-WP_075673271.1;Parent=gene-L2557_RS15140;Dbxref=GenBank:WP_075673271.1;Name=WP_075673271.1;Ontology_term=GO:0006270,GO:0006275,GO:0003677,GO:0003688,GO:0005524;gbkey=CDS;gene=dnaA;go_function=DNA binding|0003677||IEA,DNA replication origin binding|0003688||IEA,ATP binding|0005524||IEA;go_process=DNA replication initiation|0006270||IEA,regulation of DNA replication|0006275||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013183029.1;locus_tag=L2557_RS15140;product=chromosomal replication initiator protein DnaA;protein_id=WP_075673271.1;transl_table=11 NZ_JAIKUA010000254.1 RefSeq gene 9836 9979 . + . ID=gene-L2557_RS15145;Name=rpmH;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=L2557_RS15145 NZ_JAIKUA010000254.1 Protein Homology CDS 9836 9979 . + 0 ID=cds-WP_004246509.1;Parent=gene-L2557_RS15145;Dbxref=GenBank:WP_004246509.1;Name=WP_004246509.1;Ontology_term=GO:0006412,GO:0003735,GO:0000315,GO:0022625;gbkey=CDS;gene=rpmH;go_component=organellar large ribosomal subunit|0000315||IEA,cytosolic large ribosomal subunit|0022625||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246509.1;locus_tag=L2557_RS15145;product=50S ribosomal protein L34;protein_id=WP_004246509.1;transl_table=11 NZ_JAIKUA010000254.1 RefSeq gene 9997 10356 . + . ID=gene-L2557_RS15150;Name=rnpA;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=L2557_RS15150 NZ_JAIKUA010000254.1 Protein Homology CDS 9997 10356 . + 0 ID=cds-WP_071788569.1;Parent=gene-L2557_RS15150;Dbxref=GenBank:WP_071788569.1;Name=WP_071788569.1;Ontology_term=GO:0008033,GO:0000049,GO:0004526;gbkey=CDS;gene=rnpA;go_function=tRNA binding|0000049||IEA,ribonuclease P activity|0004526||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246510.1;locus_tag=L2557_RS15150;product=ribonuclease P protein component;protein_id=WP_071788569.1;transl_table=11 NZ_JAIKUA010000254.1 RefSeq gene 10320 10580 . + . ID=gene-L2557_RS15155;Name=yidD;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=L2557_RS15155 NZ_JAIKUA010000254.1 Protein Homology CDS 10320 10580 . + 0 ID=cds-WP_072064717.1;Parent=gene-L2557_RS15155;Dbxref=GenBank:WP_072064717.1;Name=WP_072064717.1;gbkey=CDS;gene=yidD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368639.1;locus_tag=L2557_RS15155;product=membrane protein insertion efficiency factor YidD;protein_id=WP_072064717.1;transl_table=11 NZ_JAIKUA010000254.1 RefSeq gene 10583 12223 . + . ID=gene-L2557_RS15160;Name=yidC;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=L2557_RS15160 NZ_JAIKUA010000254.1 Protein Homology CDS 10583 12223 . + 0 ID=cds-WP_075673272.1;Parent=gene-L2557_RS15160;Dbxref=GenBank:WP_075673272.1;Name=WP_075673272.1;Ontology_term=GO:0032977,GO:0016020;gbkey=CDS;gene=yidC;go_component=membrane|0016020||IEA;go_function=membrane insertase activity|0032977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246512.1;locus_tag=L2557_RS15160;product=membrane protein insertase YidC;protein_id=WP_075673272.1;transl_table=11 NZ_JAIKUA010000254.1 RefSeq gene 12354 13718 . + . ID=gene-L2557_RS15165;Name=mnmE;gbkey=Gene;gene=mnmE;gene_biotype=protein_coding;locus_tag=L2557_RS15165 NZ_JAIKUA010000254.1 Protein Homology CDS 12354 13718 . + 0 ID=cds-WP_075673273.1;Parent=gene-L2557_RS15165;Dbxref=GenBank:WP_075673273.1;Name=WP_075673273.1;Ontology_term=GO:0006400,GO:0003924,GO:0005515,GO:0005525;gbkey=CDS;gene=mnmE;go_function=GTPase activity|0003924||IEA,protein binding|0005515||IEA,GTP binding|0005525||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015848543.1;locus_tag=L2557_RS15165;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE;protein_id=WP_075673273.1;transl_table=11 NZ_JAIKUA010000254.1 RefSeq gene 13839 14096 . + . ID=gene-L2557_RS15170;Name=L2557_RS15170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15170 NZ_JAIKUA010000254.1 Protein Homology CDS 13839 14096 . + 0 ID=cds-WP_072070485.1;Parent=gene-L2557_RS15170;Dbxref=GenBank:WP_072070485.1;Name=WP_072070485.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249771.1;locus_tag=L2557_RS15170;product=helix-turn-helix domain-containing protein;protein_id=WP_072070485.1;transl_table=11 NZ_JAIKUA010000254.1 RefSeq gene 14504 14965 . + . ID=gene-L2557_RS15175;Name=L2557_RS15175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15175 NZ_JAIKUA010000254.1 Protein Homology CDS 14504 14965 . + 0 ID=cds-WP_075673274.1;Parent=gene-L2557_RS15175;Dbxref=GenBank:WP_075673274.1;Name=WP_075673274.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001297187.1;locus_tag=L2557_RS15175;product=DUF1097 domain-containing protein;protein_id=WP_075673274.1;transl_table=11 NZ_JAIKUA010000254.1 RefSeq gene 15135 15929 . - . ID=gene-L2557_RS15180;Name=L2557_RS15180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15180 NZ_JAIKUA010000254.1 Protein Homology CDS 15135 15929 . - 0 ID=cds-WP_099659540.1;Parent=gene-L2557_RS15180;Dbxref=GenBank:WP_099659540.1;Name=WP_099659540.1;Ontology_term=GO:0006810,GO:0015291;gbkey=CDS;go_function=secondary active transmembrane transporter activity|0015291||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246520.1;locus_tag=L2557_RS15180;product=energy transducer TonB;protein_id=WP_099659540.1;transl_table=11 NZ_JAIKUA010000254.1 RefSeq gene 15957 19010 . - . ID=gene-L2557_RS15185;Name=L2557_RS15185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15185 NZ_JAIKUA010000254.1 Protein Homology CDS 15957 19010 . - 0 ID=cds-WP_268830899.1;Parent=gene-L2557_RS15185;Dbxref=GenBank:WP_268830899.1;Name=WP_268830899.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249954.1;locus_tag=L2557_RS15185;product=TonB-dependent receptor domain-containing protein;protein_id=WP_268830899.1;transl_table=11 ##sequence-region NZ_JAIKUA010000255.1 1 19496 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000255.1 RefSeq region 1 19496 . + . ID=NZ_JAIKUA010000255.1:1..19496;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000255.1 RefSeq gene 96 1475 . - . ID=gene-L2557_RS15190;Name=L2557_RS15190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15190 NZ_JAIKUA010000255.1 Protein Homology CDS 96 1475 . - 0 ID=cds-WP_075673567.1;Parent=gene-L2557_RS15190;Dbxref=GenBank:WP_075673567.1;Name=WP_075673567.1;Ontology_term=GO:0006865,GO:0055085,GO:0015171,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=amino acid transmembrane transporter activity|0015171||IEA,transmembrane transporter activity|0022857||IEA;go_process=amino acid transport|0006865||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251872.1;locus_tag=L2557_RS15190;product=APC family permease;protein_id=WP_075673567.1;transl_table=11 NZ_JAIKUA010000255.1 RefSeq gene 1465 1674 . - . ID=gene-L2557_RS17980;Name=L2557_RS17980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17980 NZ_JAIKUA010000255.1 Protein Homology CDS 1465 1674 . - 0 ID=cds-WP_075673568.1;Parent=gene-L2557_RS17980;Dbxref=GenBank:WP_075673568.1;Name=WP_075673568.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628390.1;locus_tag=L2557_RS17980;product=hypothetical protein;protein_id=WP_075673568.1;transl_table=11 NZ_JAIKUA010000255.1 RefSeq gene 2443 4461 . - . ID=gene-L2557_RS15195;Name=L2557_RS15195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15195 NZ_JAIKUA010000255.1 Protein Homology CDS 2443 4461 . - 0 ID=cds-WP_099660741.1;Parent=gene-L2557_RS15195;Dbxref=GenBank:WP_099660741.1;Name=WP_099660741.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628391.1;locus_tag=L2557_RS15195;product=ligand-gated channel protein;protein_id=WP_099660741.1;transl_table=11 NZ_JAIKUA010000255.1 RefSeq gene 4633 5415 . - . ID=gene-L2557_RS15200;Name=L2557_RS15200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15200 NZ_JAIKUA010000255.1 Protein Homology CDS 4633 5415 . - 0 ID=cds-WP_075673570.1;Parent=gene-L2557_RS15200;Dbxref=GenBank:WP_075673570.1;Name=WP_075673570.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537297.1;locus_tag=L2557_RS15200;product=ABC transporter ATP-binding protein;protein_id=WP_075673570.1;transl_table=11 NZ_JAIKUA010000255.1 RefSeq gene 5415 6422 . - . ID=gene-L2557_RS15205;Name=L2557_RS15205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15205 NZ_JAIKUA010000255.1 Protein Homology CDS 5415 6422 . - 0 ID=cds-WP_371317014.1;Parent=gene-L2557_RS15205;Dbxref=GenBank:WP_371317014.1;Name=WP_371317014.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010846711.1;locus_tag=L2557_RS15205;product=FecCD family ABC transporter permease;protein_id=WP_371317014.1;transl_table=11 NZ_JAIKUA010000255.1 RefSeq gene 6992 8479 . - . ID=gene-L2557_RS15210;Name=L2557_RS15210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15210 NZ_JAIKUA010000255.1 Protein Homology CDS 6992 8479 . - 0 ID=cds-WP_023581400.1;Parent=gene-L2557_RS15210;Dbxref=GenBank:WP_023581400.1;Name=WP_023581400.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247812.1;locus_tag=L2557_RS15210;product=amino acid permease;protein_id=WP_023581400.1;transl_table=11 NZ_JAIKUA010000255.1 RefSeq gene 8598 9491 . - . ID=gene-L2557_RS15215;Name=yieE;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=L2557_RS15215 NZ_JAIKUA010000255.1 Protein Homology CDS 8598 9491 . - 0 ID=cds-WP_075673572.1;Parent=gene-L2557_RS15215;Dbxref=GenBank:WP_075673572.1;Name=WP_075673572.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=yieE;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537300.1;locus_tag=L2557_RS15215;product=DNA-binding transcriptional regulator YeiE;protein_id=WP_075673572.1;transl_table=11 NZ_JAIKUA010000255.1 RefSeq gene 9676 10770 . + . ID=gene-L2557_RS15220;Name=L2557_RS15220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15220 NZ_JAIKUA010000255.1 Protein Homology CDS 9676 10770 . + 0 ID=cds-WP_171455282.1;Parent=gene-L2557_RS15220;Dbxref=GenBank:WP_171455282.1;Name=WP_171455282.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537301.1;locus_tag=L2557_RS15220;product=YeiH family protein;protein_id=WP_171455282.1;transl_table=11 NZ_JAIKUA010000255.1 RefSeq gene 10938 11780 . + . ID=gene-L2557_RS15225;Name=nfo;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=L2557_RS15225 NZ_JAIKUA010000255.1 Protein Homology CDS 10938 11780 . + 0 ID=cds-WP_075673574.1;Parent=gene-L2557_RS15225;Dbxref=GenBank:WP_075673574.1;Name=WP_075673574.1;Ontology_term=GO:0006281,GO:0003677,GO:0008270;gbkey=CDS;gene=nfo;go_function=DNA binding|0003677||IEA,zinc ion binding|0008270||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015833821.1;locus_tag=L2557_RS15225;product=deoxyribonuclease IV;protein_id=WP_075673574.1;transl_table=11 NZ_JAIKUA010000255.1 RefSeq gene 11885 12823 . - . ID=gene-L2557_RS15230;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=L2557_RS15230 NZ_JAIKUA010000255.1 Protein Homology CDS 11885 12823 . - 0 ID=cds-WP_075673575.1;Parent=gene-L2557_RS15230;Dbxref=GenBank:WP_075673575.1;Name=WP_075673575.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147078.1;locus_tag=L2557_RS15230;product=1-phosphofructokinase;protein_id=WP_075673575.1;transl_table=11 NZ_JAIKUA010000255.1 RefSeq gene 13016 13432 . + . ID=gene-L2557_RS15235;Name=L2557_RS15235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15235 NZ_JAIKUA010000255.1 Protein Homology CDS 13016 13432 . + 0 ID=cds-WP_075673576.1;Parent=gene-L2557_RS15235;Dbxref=GenBank:WP_075673576.1;Name=WP_075673576.1;Ontology_term=GO:0006203,GO:0009132,GO:0042262,GO:0017110,GO:0046872,GO:0047429;gbkey=CDS;go_function=nucleoside diphosphate phosphatase activity|0017110||IEA,metal ion binding|0046872||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=dGTP catabolic process|0006203||IEA,nucleoside diphosphate metabolic process|0009132||IEA,DNA protection|0042262||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628392.1;locus_tag=L2557_RS15235;product=nucleotide triphosphate diphosphatase NUDT15;protein_id=WP_075673576.1;transl_table=11 NZ_JAIKUA010000255.1 RefSeq gene 13722 14963 . + . ID=gene-L2557_RS15240;Name=mtr;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=L2557_RS15240 NZ_JAIKUA010000255.1 Protein Homology CDS 13722 14963 . + 0 ID=cds-WP_075673577.1;Parent=gene-L2557_RS15240;Dbxref=GenBank:WP_075673577.1;Name=WP_075673577.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;gbkey=CDS;gene=mtr;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247056.1;locus_tag=L2557_RS15240;product=tryptophan permease;protein_id=WP_075673577.1;transl_table=11 NZ_JAIKUA010000255.1 RefSeq gene 15125 15697 . + . ID=gene-L2557_RS15245;Name=yeiP;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=L2557_RS15245 NZ_JAIKUA010000255.1 Protein Homology CDS 15125 15697 . + 0 ID=cds-WP_075673578.1;Parent=gene-L2557_RS15245;Dbxref=GenBank:WP_075673578.1;Name=WP_075673578.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=yeiP;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228019.1;locus_tag=L2557_RS15245;product=elongation factor P-like protein YeiP;protein_id=WP_075673578.1;transl_table=11 NZ_JAIKUA010000255.1 RefSeq gene 15839 16093 . - . ID=gene-L2557_RS15250;Name=L2557_RS15250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15250 NZ_JAIKUA010000255.1 GeneMarkS-2+ CDS 15839 16093 . - 0 ID=cds-WP_231133572.1;Parent=gene-L2557_RS15250;Dbxref=GenBank:WP_231133572.1;Name=WP_231133572.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS15250;product=hypothetical protein;protein_id=WP_231133572.1;transl_table=11 NZ_JAIKUA010000255.1 RefSeq gene 16433 16744 . - . ID=gene-L2557_RS15255;Name=L2557_RS15255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15255 NZ_JAIKUA010000255.1 Protein Homology CDS 16433 16744 . - 0 ID=cds-WP_075673580.1;Parent=gene-L2557_RS15255;Dbxref=GenBank:WP_075673580.1;Name=WP_075673580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247052.1;locus_tag=L2557_RS15255;product=hypothetical protein;protein_id=WP_075673580.1;transl_table=11 NZ_JAIKUA010000255.1 RefSeq gene 17092 17799 . + . ID=gene-L2557_RS15260;Name=L2557_RS15260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15260 NZ_JAIKUA010000255.1 Protein Homology CDS 17092 17799 . + 0 ID=cds-WP_099660743.1;Parent=gene-L2557_RS15260;Dbxref=GenBank:WP_099660743.1;Name=WP_099660743.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537311.1;locus_tag=L2557_RS15260;product=phosphatase PAP2 family protein;protein_id=WP_099660743.1;transl_table=11 NZ_JAIKUA010000255.1 RefSeq gene 18161 18775 . + . ID=gene-L2557_RS15265;Name=mepS;gbkey=Gene;gene=mepS;gene_biotype=protein_coding;locus_tag=L2557_RS15265 NZ_JAIKUA010000255.1 Protein Homology CDS 18161 18775 . + 0 ID=cds-WP_075673582.1;Parent=gene-L2557_RS15265;Dbxref=GenBank:WP_075673582.1;Name=WP_075673582.1;gbkey=CDS;gene=mepS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247050.1;locus_tag=L2557_RS15265;product=bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase;protein_id=WP_075673582.1;transl_table=11 NZ_JAIKUA010000255.1 RefSeq gene 18897 19244 . - . ID=gene-L2557_RS15270;Name=L2557_RS15270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15270 NZ_JAIKUA010000255.1 Protein Homology CDS 18897 19244 . - 0 ID=cds-WP_075673583.1;Parent=gene-L2557_RS15270;Dbxref=GenBank:WP_075673583.1;Name=WP_075673583.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247049.1;locus_tag=L2557_RS15270;product=YejG family protein;protein_id=WP_075673583.1;transl_table=11 ##sequence-region NZ_JAIKUA010000256.1 1 361 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000256.1 RefSeq region 1 361 . + . ID=NZ_JAIKUA010000256.1:1..361;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000256.1 RefSeq gene 118 361 . + . ID=gene-L2557_RS15275;Name=L2557_RS15275;end_range=361,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15275;partial=true NZ_JAIKUA010000256.1 Protein Homology CDS 118 361 . + 0 ID=cds-WP_235410166.1;Parent=gene-L2557_RS15275;Dbxref=GenBank:WP_235410166.1;Name=WP_235410166.1;Ontology_term=GO:0000166,GO:0016491;end_range=361,.;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,oxidoreductase activity|0016491||IEA;inference=COORDINATES: protein motif:HMM:NF013567.7;locus_tag=L2557_RS15275;partial=true;product=Gfo/Idh/MocA family oxidoreductase;protein_id=WP_235410166.1;transl_table=11 ##sequence-region NZ_JAIKUA010000257.1 1 5511 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000257.1 RefSeq region 1 5511 . + . ID=NZ_JAIKUA010000257.1:1..5511;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000257.1 RefSeq gene 129 818 . - . ID=gene-L2557_RS15280;Name=L2557_RS15280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15280 NZ_JAIKUA010000257.1 Protein Homology CDS 129 818 . - 0 ID=cds-WP_099660604.1;Parent=gene-L2557_RS15280;Dbxref=GenBank:WP_099660604.1;Name=WP_099660604.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: protein motif:HMM:NF012565.6;locus_tag=L2557_RS15280;product=fimbrial biogenesis chaperone;protein_id=WP_099660604.1;transl_table=11 NZ_JAIKUA010000257.1 RefSeq gene 821 2200 . - . ID=gene-L2557_RS15285;Name=L2557_RS15285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15285 NZ_JAIKUA010000257.1 Protein Homology CDS 821 2200 . - 0 ID=cds-WP_223672316.1;Parent=gene-L2557_RS15285;Dbxref=GenBank:WP_223672316.1;Name=WP_223672316.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671583.1;locus_tag=L2557_RS15285;product=fimbrial protein;protein_id=WP_223672316.1;transl_table=11 NZ_JAIKUA010000257.1 RefSeq gene 2197 4725 . - . ID=gene-L2557_RS15290;Name=L2557_RS15290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15290 NZ_JAIKUA010000257.1 Protein Homology CDS 2197 4725 . - 0 ID=cds-WP_235410167.1;Parent=gene-L2557_RS15290;Dbxref=GenBank:WP_235410167.1;Name=WP_235410167.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: protein motif:HMM:NF012786.6;locus_tag=L2557_RS15290;product=fimbria/pilus outer membrane usher protein;protein_id=WP_235410167.1;transl_table=11 NZ_JAIKUA010000257.1 RefSeq gene 4742 5467 . - . ID=gene-L2557_RS15295;Name=L2557_RS15295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15295 NZ_JAIKUA010000257.1 Protein Homology CDS 4742 5467 . - 0 ID=cds-WP_083629133.1;Parent=gene-L2557_RS15295;Dbxref=GenBank:WP_083629133.1;Name=WP_083629133.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: protein motif:HMM:NF012565.6;locus_tag=L2557_RS15295;product=fimbrial biogenesis chaperone;protein_id=WP_083629133.1;transl_table=11 ##sequence-region NZ_JAIKUA010000258.1 1 4904 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000258.1 RefSeq region 1 4904 . + . ID=NZ_JAIKUA010000258.1:1..4904;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000258.1 RefSeq gene 1 331 . + . ID=gene-L2557_RS15300;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=L2557_RS15300;partial=true;start_range=.,1 NZ_JAIKUA010000258.1 Protein Homology CDS 1 331 . + 1 ID=cds-WP_235410168.1;Parent=gene-L2557_RS15300;Dbxref=GenBank:WP_235410168.1;Name=WP_235410168.1;Ontology_term=GO:0044571,GO:0001671,GO:0051087;gbkey=CDS;gene=hscB;go_function=ATPase activator activity|0001671||IEA,protein-folding chaperone binding|0051087||IEA;go_process=[2Fe-2S] cluster assembly|0044571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243844.1;locus_tag=L2557_RS15300;partial=true;product=Fe-S protein assembly co-chaperone HscB;protein_id=WP_235410168.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000258.1 RefSeq gene 343 2193 . + . ID=gene-L2557_RS15305;Name=hscA;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=L2557_RS15305 NZ_JAIKUA010000258.1 Protein Homology CDS 343 2193 . + 0 ID=cds-WP_235410169.1;Parent=gene-L2557_RS15305;Dbxref=GenBank:WP_235410169.1;Name=WP_235410169.1;Ontology_term=GO:0006457,GO:0016226,GO:0005515,GO:0005524,GO:0016887;gbkey=CDS;gene=hscA;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004707906.1;locus_tag=L2557_RS15305;product=Fe-S protein assembly chaperone HscA;protein_id=WP_235410169.1;transl_table=11 NZ_JAIKUA010000258.1 RefSeq gene 2196 2531 . + . ID=gene-L2557_RS15310;Name=fdx;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=L2557_RS15310 NZ_JAIKUA010000258.1 Protein Homology CDS 2196 2531 . + 0 ID=cds-WP_006533442.1;Parent=gene-L2557_RS15310;Dbxref=GenBank:WP_006533442.1;Name=WP_006533442.1;Ontology_term=GO:0016226,GO:0009055,GO:0051537;gbkey=CDS;gene=fdx;go_function=electron transfer activity|0009055||IEA,2 iron%2C 2 sulfur cluster binding|0051537||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015683702.1;locus_tag=L2557_RS15310;product=ISC system 2Fe-2S type ferredoxin;protein_id=WP_006533442.1;transl_table=11 NZ_JAIKUA010000258.1 RefSeq gene 2547 2741 . + . ID=gene-L2557_RS15315;Name=iscX;gbkey=Gene;gene=iscX;gene_biotype=protein_coding;locus_tag=L2557_RS15315 NZ_JAIKUA010000258.1 Protein Homology CDS 2547 2741 . + 0 ID=cds-WP_006533441.1;Parent=gene-L2557_RS15315;Dbxref=GenBank:WP_006533441.1;Name=WP_006533441.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=iscX;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243841.1;locus_tag=L2557_RS15315;product=Fe-S cluster assembly protein IscX;protein_id=WP_006533441.1;transl_table=11 NZ_JAIKUA010000258.1 RefSeq gene 3022 4317 . + . ID=gene-L2557_RS15320;Name=pepB;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=L2557_RS15320 NZ_JAIKUA010000258.1 Protein Homology CDS 3022 4317 . + 0 ID=cds-WP_235410170.1;Parent=gene-L2557_RS15320;Dbxref=GenBank:WP_235410170.1;Name=WP_235410170.1;Ontology_term=GO:0006508,GO:0019538,GO:0030145,GO:0070006;gbkey=CDS;gene=pepB;go_function=manganese ion binding|0030145||IEA,metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA,protein metabolic process|0019538||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814153.1;locus_tag=L2557_RS15320;product=aminopeptidase PepB;protein_id=WP_235410170.1;transl_table=11 NZ_JAIKUA010000258.1 RefSeq gene 4345 4770 . + . ID=gene-L2557_RS15325;Name=L2557_RS15325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15325 NZ_JAIKUA010000258.1 Protein Homology CDS 4345 4770 . + 0 ID=cds-WP_075670482.1;Parent=gene-L2557_RS15325;Dbxref=GenBank:WP_075670482.1;Name=WP_075670482.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248435.1;locus_tag=L2557_RS15325;product=enhanced serine sensitivity protein SseB C-terminal domain-containing protein;protein_id=WP_075670482.1;transl_table=11 ##sequence-region NZ_JAIKUA010000259.1 1 5299 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000259.1 RefSeq region 1 5299 . + . ID=NZ_JAIKUA010000259.1:1..5299;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000259.1 RefSeq gene 31 1596 . + . ID=gene-L2557_RS15330;Name=tyrR;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=L2557_RS15330 NZ_JAIKUA010000259.1 Protein Homology CDS 31 1596 . + 0 ID=cds-WP_075672157.1;Parent=gene-L2557_RS15330;Dbxref=GenBank:WP_075672157.1;Name=WP_075672157.1;Ontology_term=GO:0006355,GO:0008134;gbkey=CDS;gene=tyrR;go_function=transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243093.1;locus_tag=L2557_RS15330;product=transcriptional regulator TyrR;protein_id=WP_075672157.1;transl_table=11 NZ_JAIKUA010000259.1 RefSeq gene 1665 2168 . - . ID=gene-L2557_RS15335;Name=tpx;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=L2557_RS15335 NZ_JAIKUA010000259.1 Protein Homology CDS 1665 2168 . - 0 ID=cds-WP_099659684.1;Parent=gene-L2557_RS15335;Dbxref=GenBank:WP_099659684.1;Name=WP_099659684.1;Ontology_term=GO:0008379,GO:0016684;gbkey=CDS;gene=tpx;go_function=thioredoxin peroxidase activity|0008379||IEA,oxidoreductase activity%2C acting on peroxide as acceptor|0016684||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243092.1;locus_tag=L2557_RS15335;product=thiol peroxidase;protein_id=WP_099659684.1;transl_table=11 NZ_JAIKUA010000259.1 RefSeq gene 2402 4021 . + . ID=gene-L2557_RS15340;Name=L2557_RS15340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15340 NZ_JAIKUA010000259.1 Protein Homology CDS 2402 4021 . + 0 ID=cds-WP_075672153.1;Parent=gene-L2557_RS15340;Dbxref=GenBank:WP_075672153.1;Name=WP_075672153.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005270469.1;locus_tag=L2557_RS15340;product=peptide ABC transporter substrate-binding protein;protein_id=WP_075672153.1;transl_table=11 NZ_JAIKUA010000259.1 RefSeq gene 4615 5175 . - . ID=gene-L2557_RS15345;Name=L2557_RS15345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15345 NZ_JAIKUA010000259.1 Protein Homology CDS 4615 5175 . - 0 ID=cds-WP_075672150.1;Parent=gene-L2557_RS15345;Dbxref=GenBank:WP_075672150.1;Name=WP_075672150.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537001.1;locus_tag=L2557_RS15345;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_075672150.1;transl_table=11 ##sequence-region NZ_JAIKUA010000026.1 1 13057 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000026.1 RefSeq region 1 13057 . + . ID=NZ_JAIKUA010000026.1:1..13057;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000026.1 RefSeq gene 121 708 . + . ID=gene-L2557_RS02760;Name=L2557_RS02760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02760 NZ_JAIKUA010000026.1 Protein Homology CDS 121 708 . + 0 ID=cds-WP_075673542.1;Parent=gene-L2557_RS02760;Dbxref=GenBank:WP_075673542.1;Name=WP_075673542.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536334.1;locus_tag=L2557_RS02760;product=TetR/AcrR family transcriptional regulator;protein_id=WP_075673542.1;transl_table=11 NZ_JAIKUA010000026.1 RefSeq gene 735 1589 . + . ID=gene-L2557_RS02765;Name=L2557_RS02765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02765 NZ_JAIKUA010000026.1 Protein Homology CDS 735 1589 . + 0 ID=cds-WP_109419943.1;Parent=gene-L2557_RS02765;Dbxref=GenBank:WP_109419943.1;Name=WP_109419943.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249178.1;locus_tag=L2557_RS02765;product=transcriptional regulator;protein_id=WP_109419943.1;transl_table=11 NZ_JAIKUA010000026.1 RefSeq gene 1589 2107 . + . ID=gene-L2557_RS02770;Name=L2557_RS02770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02770 NZ_JAIKUA010000026.1 Protein Homology CDS 1589 2107 . + 0 ID=cds-WP_006536331.1;Parent=gene-L2557_RS02770;Dbxref=GenBank:WP_006536331.1;Name=WP_006536331.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536331.1;locus_tag=L2557_RS02770;product=FidL-like protein;protein_id=WP_006536331.1;transl_table=11 NZ_JAIKUA010000026.1 RefSeq gene 2784 3062 . + . ID=gene-L2557_RS02775;Name=L2557_RS02775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02775 NZ_JAIKUA010000026.1 Protein Homology CDS 2784 3062 . + 0 ID=cds-WP_004249182.1;Parent=gene-L2557_RS02775;Dbxref=GenBank:WP_004249182.1;Name=WP_004249182.1;Ontology_term=GO:0031469;gbkey=CDS;go_component=bacterial microcompartment|0031469||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249182.1;locus_tag=L2557_RS02775;product=BMC domain-containing protein;protein_id=WP_004249182.1;transl_table=11 NZ_JAIKUA010000026.1 RefSeq gene 3083 3367 . + . ID=gene-L2557_RS02780;Name=L2557_RS02780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02780 NZ_JAIKUA010000026.1 Protein Homology CDS 3083 3367 . + 0 ID=cds-WP_006536329.1;Parent=gene-L2557_RS02780;Dbxref=GenBank:WP_006536329.1;Name=WP_006536329.1;Ontology_term=GO:0031469;gbkey=CDS;go_component=bacterial microcompartment|0031469||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002442227.1;locus_tag=L2557_RS02780;product=BMC domain-containing protein;protein_id=WP_006536329.1;transl_table=11 NZ_JAIKUA010000026.1 RefSeq gene 3382 3660 . + . ID=gene-L2557_RS02785;Name=L2557_RS02785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02785 NZ_JAIKUA010000026.1 Protein Homology CDS 3382 3660 . + 0 ID=cds-WP_006536328.1;Parent=gene-L2557_RS02785;Dbxref=GenBank:WP_006536328.1;Name=WP_006536328.1;Ontology_term=GO:0031469;gbkey=CDS;go_component=bacterial microcompartment|0031469||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245869.1;locus_tag=L2557_RS02785;product=BMC domain-containing protein;protein_id=WP_006536328.1;transl_table=11 NZ_JAIKUA010000026.1 RefSeq gene 3733 5400 . + . ID=gene-L2557_RS02790;Name=L2557_RS02790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02790 NZ_JAIKUA010000026.1 Protein Homology CDS 3733 5400 . + 0 ID=cds-WP_075673540.1;Parent=gene-L2557_RS02790;Dbxref=GenBank:WP_075673540.1;Name=WP_075673540.1;Ontology_term=GO:0016620;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000570989.1;locus_tag=L2557_RS02790;product=acetaldehyde dehydrogenase (acetylating);protein_id=WP_075673540.1;transl_table=11 NZ_JAIKUA010000026.1 RefSeq gene 5427 5690 . + . ID=gene-L2557_RS02795;Name=L2557_RS02795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02795 NZ_JAIKUA010000026.1 Protein Homology CDS 5427 5690 . + 0 ID=cds-WP_099660496.1;Parent=gene-L2557_RS02795;Dbxref=GenBank:WP_099660496.1;Name=WP_099660496.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245867.1;locus_tag=L2557_RS02795;product=EutN/CcmL family microcompartment protein;protein_id=WP_099660496.1;transl_table=11 NZ_JAIKUA010000026.1 RefSeq gene 5698 6846 . + . ID=gene-L2557_RS02800;Name=L2557_RS02800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02800 NZ_JAIKUA010000026.1 Protein Homology CDS 5698 6846 . + 0 ID=cds-WP_159363609.1;Parent=gene-L2557_RS02800;Dbxref=GenBank:WP_159363609.1;Name=WP_159363609.1;Ontology_term=GO:0051144,GO:0004022,GO:0005506,GO:0030554;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,iron ion binding|0005506||IEA,adenyl nucleotide binding|0030554||IEA;go_process=1%2C2-propanediol catabolic process|0051144||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536324.1;locus_tag=L2557_RS02800;product=1-propanol dehydrogenase PduQ;protein_id=WP_159363609.1;transl_table=11 NZ_JAIKUA010000026.1 RefSeq gene 6903 10331 . + . ID=gene-L2557_RS02805;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=L2557_RS02805 NZ_JAIKUA010000026.1 Protein Homology CDS 6903 10331 . + 0 ID=cds-WP_075673538.1;Parent=gene-L2557_RS02805;Dbxref=GenBank:WP_075673538.1;Name=WP_075673538.1;Ontology_term=GO:0042426,GO:0016829,GO:0016840;gbkey=CDS;gene=cutC;go_function=lyase activity|0016829||IEA,carbon-nitrogen lyase activity|0016840||IEA;go_process=choline catabolic process|0042426||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628496.1;locus_tag=L2557_RS02805;product=choline trimethylamine-lyase;protein_id=WP_075673538.1;transl_table=11 NZ_JAIKUA010000026.1 RefSeq gene 10432 11382 . + . ID=gene-L2557_RS02810;Name=cutD;gbkey=Gene;gene=cutD;gene_biotype=protein_coding;locus_tag=L2557_RS02810 NZ_JAIKUA010000026.1 Protein Homology CDS 10432 11382 . + 0 ID=cds-WP_075673537.1;Parent=gene-L2557_RS02810;Dbxref=GenBank:WP_075673537.1;Name=WP_075673537.1;Ontology_term=GO:0042426,GO:0043687,GO:0051539,GO:1904047;gbkey=CDS;gene=cutD;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,S-adenosyl-L-methionine binding|1904047||IEA;go_process=choline catabolic process|0042426||IEA,post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536322.1;locus_tag=L2557_RS02810;product=choline TMA-lyase-activating enzyme;protein_id=WP_075673537.1;transl_table=11 NZ_JAIKUA010000026.1 RefSeq gene 11396 11887 . + . ID=gene-L2557_RS02815;Name=L2557_RS02815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02815 NZ_JAIKUA010000026.1 Protein Homology CDS 11396 11887 . + 0 ID=cds-WP_099660493.1;Parent=gene-L2557_RS02815;Dbxref=GenBank:WP_099660493.1;Name=WP_099660493.1;Ontology_term=GO:0031469;gbkey=CDS;go_component=bacterial microcompartment|0031469||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009486241.1;locus_tag=L2557_RS02815;product=BMC domain-containing protein;protein_id=WP_099660493.1;transl_table=11 NZ_JAIKUA010000026.1 RefSeq gene 11887 12531 . + . ID=gene-L2557_RS02820;Name=L2557_RS02820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02820 NZ_JAIKUA010000026.1 Protein Homology CDS 11887 12531 . + 0 ID=cds-WP_075673535.1;Parent=gene-L2557_RS02820;Dbxref=GenBank:WP_075673535.1;Name=WP_075673535.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009652887.1;locus_tag=L2557_RS02820;product=phosphate propanoyltransferase;protein_id=WP_075673535.1;transl_table=11 NZ_JAIKUA010000026.1 RefSeq gene 12549 13057 . + . ID=gene-L2557_RS02825;Name=L2557_RS02825;end_range=13057,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02825;partial=true NZ_JAIKUA010000026.1 Protein Homology CDS 12549 13057 . + 0 ID=cds-WP_235409779.1;Parent=gene-L2557_RS02825;Dbxref=GenBank:WP_235409779.1;Name=WP_235409779.1;end_range=13057,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628498.1;locus_tag=L2557_RS02825;partial=true;product=hypothetical protein;protein_id=WP_235409779.1;transl_table=11 ##sequence-region NZ_JAIKUA010000260.1 1 868 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000260.1 RefSeq region 1 868 . + . ID=NZ_JAIKUA010000260.1:1..868;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000260.1 RefSeq gene 163 507 . - . ID=gene-L2557_RS15350;Name=L2557_RS15350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15350 NZ_JAIKUA010000260.1 Protein Homology CDS 163 507 . - 0 ID=cds-WP_075670926.1;Parent=gene-L2557_RS15350;Dbxref=GenBank:WP_075670926.1;Name=WP_075670926.1;Ontology_term=GO:0055085,GO:0005215,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transporter activity|0005215||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248496.1;locus_tag=L2557_RS15350;product=DMT family protein;protein_id=WP_075670926.1;transl_table=11 ##sequence-region NZ_JAIKUA010000261.1 1 3646 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000261.1 RefSeq region 1 3646 . + . ID=NZ_JAIKUA010000261.1:1..3646;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000261.1 RefSeq gene 60 3284 . + . ID=gene-L2557_RS15355;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=L2557_RS15355 NZ_JAIKUA010000261.1 Protein Homology CDS 60 3284 . + 0 ID=cds-WP_235410171.1;Parent=gene-L2557_RS15355;Dbxref=GenBank:WP_235410171.1;Name=WP_235410171.1;gbkey=CDS;gene=pta;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249480.1;locus_tag=L2557_RS15355;product=autotransporter Pta;protein_id=WP_235410171.1;transl_table=11 NZ_JAIKUA010000261.1 RefSeq gene 3395 3646 . + . ID=gene-L2557_RS15360;Name=L2557_RS15360;end_range=3646,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15360;partial=true NZ_JAIKUA010000261.1 GeneMarkS-2+ CDS 3395 3646 . + 0 ID=cds-WP_235410172.1;Parent=gene-L2557_RS15360;Dbxref=GenBank:WP_235410172.1;Name=WP_235410172.1;end_range=3646,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS15360;partial=true;product=hypothetical protein;protein_id=WP_235410172.1;transl_table=11 ##sequence-region NZ_JAIKUA010000262.1 1 12222 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000262.1 RefSeq region 1 12222 . + . ID=NZ_JAIKUA010000262.1:1..12222;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000262.1 RefSeq gene 1 777 . - . ID=gene-L2557_RS15365;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=L2557_RS15365;partial=true;start_range=.,1 NZ_JAIKUA010000262.1 Protein Homology CDS 1 777 . - 0 ID=cds-WP_235410173.1;Parent=gene-L2557_RS15365;Dbxref=GenBank:WP_235410173.1;Name=WP_235410173.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312846.1;locus_tag=L2557_RS15365;partial=true;product=formate dehydrogenase subunit beta;protein_id=WP_235410173.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000262.1 RefSeq pseudogene 788 2494 . - . ID=gene-L2557_RS15370;Name=L2557_RS15370;end_range=2494,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS15370;partial=true;pseudo=true NZ_JAIKUA010000262.1 Protein Homology CDS 788 2494 . - 0 ID=cds-L2557_RS15370;Parent=gene-L2557_RS15370;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016491,GO:0043546;end_range=2494,.;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003020303.1;locus_tag=L2557_RS15370;partial=true;product=molybdopterin dinucleotide binding domain-containing protein;pseudo=true;transl_table=11 NZ_JAIKUA010000262.1 RefSeq pseudogene 2479 3015 . + . ID=gene-L2557_RS15375;Name=L2557_RS15375;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS15375;partial=true;pseudo=true;start_range=.,2479 NZ_JAIKUA010000262.1 Protein Homology CDS 2479 3015 . + 0 ID=cds-L2557_RS15375;Parent=gene-L2557_RS15375;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628621.1;locus_tag=L2557_RS15375;partial=true;product=dihydrodipicolinate synthase family protein;pseudo=true;start_range=.,2479;transl_table=11 NZ_JAIKUA010000262.1 RefSeq gene 3194 3910 . + . ID=gene-L2557_RS15380;Name=L2557_RS15380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15380 NZ_JAIKUA010000262.1 Protein Homology CDS 3194 3910 . + 0 ID=cds-WP_196563855.1;Parent=gene-L2557_RS15380;Dbxref=GenBank:WP_196563855.1;Name=WP_196563855.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534461.1;locus_tag=L2557_RS15380;product=hypothetical protein;protein_id=WP_196563855.1;transl_table=11 NZ_JAIKUA010000262.1 RefSeq gene 4012 5994 . + . ID=gene-L2557_RS15385;Name=L2557_RS15385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15385 NZ_JAIKUA010000262.1 Protein Homology CDS 4012 5994 . + 0 ID=cds-WP_099659229.1;Parent=gene-L2557_RS15385;Dbxref=GenBank:WP_099659229.1;Name=WP_099659229.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628623.1;locus_tag=L2557_RS15385;product=acyltransferase family protein;protein_id=WP_099659229.1;transl_table=11 NZ_JAIKUA010000262.1 RefSeq gene 6076 6789 . - . ID=gene-L2557_RS15390;Name=L2557_RS15390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15390 NZ_JAIKUA010000262.1 Protein Homology CDS 6076 6789 . - 0 ID=cds-WP_075672558.1;Parent=gene-L2557_RS15390;Dbxref=GenBank:WP_075672558.1;Name=WP_075672558.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003037218.1;locus_tag=L2557_RS15390;product=MgtC/SapB family protein;protein_id=WP_075672558.1;transl_table=11 NZ_JAIKUA010000262.1 RefSeq gene 6824 8071 . - . ID=gene-L2557_RS15395;Name=L2557_RS15395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15395 NZ_JAIKUA010000262.1 Protein Homology CDS 6824 8071 . - 0 ID=cds-WP_075672557.1;Parent=gene-L2557_RS15395;Dbxref=GenBank:WP_075672557.1;Name=WP_075672557.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827141.1;locus_tag=L2557_RS15395;product=MFS transporter;protein_id=WP_075672557.1;transl_table=11 NZ_JAIKUA010000262.1 RefSeq gene 8085 8906 . - . ID=gene-L2557_RS15400;Name=L2557_RS15400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15400 NZ_JAIKUA010000262.1 Protein Homology CDS 8085 8906 . - 0 ID=cds-WP_075672556.1;Parent=gene-L2557_RS15400;Dbxref=GenBank:WP_075672556.1;Name=WP_075672556.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249024.1;locus_tag=L2557_RS15400;product=MBL fold metallo-hydrolase;protein_id=WP_075672556.1;transl_table=11 NZ_JAIKUA010000262.1 RefSeq gene 9252 11459 . + . ID=gene-L2557_RS15405;Name=L2557_RS15405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15405 NZ_JAIKUA010000262.1 Protein Homology CDS 9252 11459 . + 0 ID=cds-WP_159242143.1;Parent=gene-L2557_RS15405;Dbxref=GenBank:WP_159242143.1;Name=WP_159242143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827139.1;locus_tag=L2557_RS15405;product=extracellular solute-binding protein;protein_id=WP_159242143.1;transl_table=11 NZ_JAIKUA010000262.1 RefSeq gene 11518 12180 . - . ID=gene-L2557_RS15410;Name=ytfE;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=L2557_RS15410 NZ_JAIKUA010000262.1 Protein Homology CDS 11518 12180 . - 0 ID=cds-WP_099659227.1;Parent=gene-L2557_RS15410;Dbxref=GenBank:WP_099659227.1;Name=WP_099659227.1;gbkey=CDS;gene=ytfE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000331463.1;locus_tag=L2557_RS15410;product=iron-sulfur cluster repair protein YtfE;protein_id=WP_099659227.1;transl_table=11 ##sequence-region NZ_JAIKUA010000263.1 1 8287 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000263.1 RefSeq region 1 8287 . + . ID=NZ_JAIKUA010000263.1:1..8287;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000263.1 RefSeq gene 7 1599 . + . ID=gene-L2557_RS15415;Name=rtcR;gbkey=Gene;gene=rtcR;gene_biotype=protein_coding;locus_tag=L2557_RS15415 NZ_JAIKUA010000263.1 Protein Homology CDS 7 1599 . + 0 ID=cds-WP_099659920.1;Parent=gene-L2557_RS15415;Dbxref=GenBank:WP_099659920.1;Name=WP_099659920.1;Ontology_term=GO:0006355,GO:0003700,GO:0005524,GO:0008134;gbkey=CDS;gene=rtcR;go_function=DNA-binding transcription factor activity|0003700||IEA,ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014913984.1;locus_tag=L2557_RS15415;product=RNA repair transcriptional activator RtcR;protein_id=WP_099659920.1;transl_table=11 NZ_JAIKUA010000263.1 RefSeq gene 1609 2526 . + . ID=gene-L2557_RS15420;Name=rnz;gbkey=Gene;gene=rnz;gene_biotype=protein_coding;locus_tag=L2557_RS15420 NZ_JAIKUA010000263.1 Protein Homology CDS 1609 2526 . + 0 ID=cds-WP_099659921.1;Parent=gene-L2557_RS15420;Dbxref=GenBank:WP_099659921.1;Name=WP_099659921.1;Ontology_term=GO:0042780,GO:0016891;gbkey=CDS;gene=rnz;go_function=RNA endonuclease activity producing 5'-phosphomonoesters%2C hydrolytic mechanism|0016891||IEA;go_process=tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247319.1;locus_tag=L2557_RS15420;product=ribonuclease Z;protein_id=WP_099659921.1;transl_table=11 NZ_JAIKUA010000263.1 RefSeq gene 2616 3278 . - . ID=gene-L2557_RS15425;Name=L2557_RS15425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15425 NZ_JAIKUA010000263.1 Protein Homology CDS 2616 3278 . - 0 ID=cds-WP_099659922.1;Parent=gene-L2557_RS15425;Dbxref=GenBank:WP_099659922.1;Name=WP_099659922.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008815567.1;locus_tag=L2557_RS15425;product=DUF421 domain-containing protein;protein_id=WP_099659922.1;transl_table=11 NZ_JAIKUA010000263.1 RefSeq gene 3546 4181 . + . ID=gene-L2557_RS15430;Name=L2557_RS15430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15430 NZ_JAIKUA010000263.1 Protein Homology CDS 3546 4181 . + 0 ID=cds-WP_075673409.1;Parent=gene-L2557_RS15430;Dbxref=GenBank:WP_075673409.1;Name=WP_075673409.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247317.1;locus_tag=L2557_RS15430;product=hypothetical protein;protein_id=WP_075673409.1;transl_table=11 NZ_JAIKUA010000263.1 RefSeq gene 4547 6550 . + . ID=gene-L2557_RS15435;Name=betT;gbkey=Gene;gene=betT;gene_biotype=protein_coding;locus_tag=L2557_RS15435 NZ_JAIKUA010000263.1 Protein Homology CDS 4547 6550 . + 0 ID=cds-WP_235410174.1;Parent=gene-L2557_RS15435;Dbxref=GenBank:WP_235410174.1;Name=WP_235410174.1;Ontology_term=GO:0071705,GO:0022857,GO:0016020;gbkey=CDS;gene=betT;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=nitrogen compound transport|0071705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247316.1;locus_tag=L2557_RS15435;product=choline BCCT transporter BetT;protein_id=WP_235410174.1;transl_table=11 NZ_JAIKUA010000263.1 RefSeq pseudogene 6616 7052 . - . ID=gene-L2557_RS15440;Name=hpaR;gbkey=Gene;gene=hpaR;gene_biotype=pseudogene;locus_tag=L2557_RS15440;pseudo=true NZ_JAIKUA010000263.1 Protein Homology CDS 6616 7052 . - 0 ID=cds-L2557_RS15440;Parent=gene-L2557_RS15440;Note=frameshifted;Ontology_term=GO:0045892,GO:0003677,GO:0003700;gbkey=CDS;gene=hpaR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244947.1;locus_tag=L2557_RS15440;product=homoprotocatechuate degradation operon regulator HpaR;pseudo=true;transl_table=11 NZ_JAIKUA010000263.1 RefSeq gene 7643 8161 . + . ID=gene-L2557_RS15445;Name=hpaC;gbkey=Gene;gene=hpaC;gene_biotype=protein_coding;locus_tag=L2557_RS15445 NZ_JAIKUA010000263.1 Protein Homology CDS 7643 8161 . + 0 ID=cds-WP_075673406.1;Parent=gene-L2557_RS15445;Dbxref=GenBank:WP_075673406.1;Name=WP_075673406.1;Ontology_term=GO:0042537,GO:0016651,GO:0051287;gbkey=CDS;gene=hpaC;go_function=oxidoreductase activity%2C acting on NAD(P)H|0016651||IEA,NAD binding|0051287||IEA;go_process=benzene-containing compound metabolic process|0042537||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534912.1;locus_tag=L2557_RS15445;product=4-hydroxyphenylacetate 3-monooxygenase%2C reductase component;protein_id=WP_075673406.1;transl_table=11 ##sequence-region NZ_JAIKUA010000264.1 1 10505 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000264.1 RefSeq region 1 10505 . + . ID=NZ_JAIKUA010000264.1:1..10505;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000264.1 RefSeq gene 180 1079 . + . ID=gene-L2557_RS15450;Name=L2557_RS15450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15450 NZ_JAIKUA010000264.1 Protein Homology CDS 180 1079 . + 0 ID=cds-WP_159364045.1;Parent=gene-L2557_RS15450;Dbxref=GenBank:WP_159364045.1;Name=WP_159364045.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015366366.1;locus_tag=L2557_RS15450;product=endonuclease/exonuclease/phosphatase family protein;protein_id=WP_159364045.1;transl_table=11 NZ_JAIKUA010000264.1 RefSeq gene 1162 2319 . - . ID=gene-L2557_RS15455;Name=L2557_RS15455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15455 NZ_JAIKUA010000264.1 Protein Homology CDS 1162 2319 . - 0 ID=cds-WP_156733501.1;Parent=gene-L2557_RS15455;Dbxref=GenBank:WP_156733501.1;Name=WP_156733501.1;Ontology_term=GO:0008483,GO:0030170;gbkey=CDS;go_function=transaminase activity|0008483||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248208.1;locus_tag=L2557_RS15455;product=pyridoxal phosphate-dependent aminotransferase;protein_id=WP_156733501.1;transl_table=11 NZ_JAIKUA010000264.1 RefSeq gene 2479 3357 . - . ID=gene-L2557_RS15460;Name=L2557_RS15460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15460 NZ_JAIKUA010000264.1 Protein Homology CDS 2479 3357 . - 0 ID=cds-WP_235410175.1;Parent=gene-L2557_RS15460;Dbxref=GenBank:WP_235410175.1;Name=WP_235410175.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661763.1;locus_tag=L2557_RS15460;product=LysR family transcriptional regulator;protein_id=WP_235410175.1;transl_table=11 NZ_JAIKUA010000264.1 RefSeq gene 3563 4177 . + . ID=gene-L2557_RS15465;Name=L2557_RS15465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15465 NZ_JAIKUA010000264.1 Protein Homology CDS 3563 4177 . + 0 ID=cds-WP_075673775.1;Parent=gene-L2557_RS15465;Dbxref=GenBank:WP_075673775.1;Name=WP_075673775.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658344.1;locus_tag=L2557_RS15465;product=LysE family translocator;protein_id=WP_075673775.1;transl_table=11 NZ_JAIKUA010000264.1 RefSeq gene 4240 6282 . - . ID=gene-L2557_RS15470;Name=L2557_RS15470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15470 NZ_JAIKUA010000264.1 Protein Homology CDS 4240 6282 . - 0 ID=cds-WP_099660319.1;Parent=gene-L2557_RS15470;Dbxref=GenBank:WP_099660319.1;Name=WP_099660319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248207.1;locus_tag=L2557_RS15470;product=choline transporter;protein_id=WP_099660319.1;transl_table=11 NZ_JAIKUA010000264.1 RefSeq gene 6492 7094 . + . ID=gene-L2557_RS15475;Name=betI;gbkey=Gene;gene=betI;gene_biotype=protein_coding;locus_tag=L2557_RS15475 NZ_JAIKUA010000264.1 Protein Homology CDS 6492 7094 . + 0 ID=cds-WP_075673777.1;Parent=gene-L2557_RS15475;Dbxref=GenBank:WP_075673777.1;Name=WP_075673777.1;Ontology_term=GO:0003677;gbkey=CDS;gene=betI;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536469.1;locus_tag=L2557_RS15475;product=transcriptional regulator BetI;protein_id=WP_075673777.1;transl_table=11 NZ_JAIKUA010000264.1 RefSeq gene 7119 8594 . + . ID=gene-L2557_RS15480;Name=betB;gbkey=Gene;gene=betB;gene_biotype=protein_coding;locus_tag=L2557_RS15480 NZ_JAIKUA010000264.1 Protein Homology CDS 7119 8594 . + 0 ID=cds-WP_075673778.1;Parent=gene-L2557_RS15480;Dbxref=GenBank:WP_075673778.1;Name=WP_075673778.1;Ontology_term=GO:0019285,GO:0008802,GO:0046872;gbkey=CDS;gene=betB;go_function=betaine-aldehyde dehydrogenase (NAD+) activity|0008802||IEA,metal ion binding|0046872||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243216.1;locus_tag=L2557_RS15480;product=betaine-aldehyde dehydrogenase;protein_id=WP_075673778.1;transl_table=11 NZ_JAIKUA010000264.1 RefSeq gene 8634 10313 . + . ID=gene-L2557_RS15485;Name=betA;gbkey=Gene;gene=betA;gene_biotype=protein_coding;locus_tag=L2557_RS15485 NZ_JAIKUA010000264.1 Protein Homology CDS 8634 10313 . + 0 ID=cds-WP_235410176.1;Parent=gene-L2557_RS15485;Dbxref=GenBank:WP_235410176.1;Name=WP_235410176.1;Ontology_term=GO:0019285,GO:0008812;gbkey=CDS;gene=betA;go_function=choline dehydrogenase activity|0008812||IEA;go_process=glycine betaine biosynthetic process from choline|0019285||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008911637.1;locus_tag=L2557_RS15485;product=choline dehydrogenase;protein_id=WP_235410176.1;transl_table=11 ##sequence-region NZ_JAIKUA010000265.1 1 1572 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000265.1 RefSeq region 1 1572 . + . ID=NZ_JAIKUA010000265.1:1..1572;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000265.1 RefSeq gene 91 234 . - . ID=gene-L2557_RS15490;Name=L2557_RS15490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15490 NZ_JAIKUA010000265.1 Protein Homology CDS 91 234 . - 0 ID=cds-WP_071788544.1;Parent=gene-L2557_RS15490;Dbxref=GenBank:WP_071788544.1;Name=WP_071788544.1;Ontology_term=GO:1990961,GO:0042910,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic detoxification by transmembrane export across the plasma membrane|1990961||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247559.1;locus_tag=L2557_RS15490;product=AcrZ family multidrug efflux pump-associated protein;protein_id=WP_071788544.1;transl_table=11 NZ_JAIKUA010000265.1 RefSeq gene 394 1185 . + . ID=gene-L2557_RS15495;Name=modE;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=L2557_RS15495 NZ_JAIKUA010000265.1 Protein Homology CDS 394 1185 . + 0 ID=cds-WP_075672736.1;Parent=gene-L2557_RS15495;Dbxref=GenBank:WP_075672736.1;Name=WP_075672736.1;Ontology_term=GO:0006355,GO:0015689,GO:0003700,GO:0030151;gbkey=CDS;gene=modE;go_function=DNA-binding transcription factor activity|0003700||IEA,molybdenum ion binding|0030151||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244449.1;locus_tag=L2557_RS15495;product=molybdenum-dependent transcriptional regulator;protein_id=WP_075672736.1;transl_table=11 NZ_JAIKUA010000265.1 RefSeq gene 1331 1572 . - . ID=gene-L2557_RS15500;Name=L2557_RS15500;end_range=1572,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15500;partial=true NZ_JAIKUA010000265.1 Protein Homology CDS 1331 1572 . - 2 ID=cds-WP_235410177.1;Parent=gene-L2557_RS15500;Dbxref=GenBank:WP_235410177.1;Name=WP_235410177.1;end_range=1572,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252175.1;locus_tag=L2557_RS15500;partial=true;product=contact-dependent growth inhibition system immunity protein;protein_id=WP_235410177.1;transl_table=11 ##sequence-region NZ_JAIKUA010000266.1 1 12711 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000266.1 RefSeq region 1 12711 . + . ID=NZ_JAIKUA010000266.1:1..12711;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000266.1 cmsearch riboswitch 129 300 . + . ID=id-NZ_JAIKUA010000266.1:129..300;Dbxref=RFAM:RF00380;Note=The M-box (ykoK) riboswitch appears to function as a genetic 'off' switch that is important for maintaining magnesium homeostasis in bacteria;bound_moiety=magnesium;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAIKUA010000266.1 RefSeq gene 377 1450 . + . ID=gene-L2557_RS15505;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=L2557_RS15505 NZ_JAIKUA010000266.1 Protein Homology CDS 377 1450 . + 0 ID=cds-WP_075670729.1;Parent=gene-L2557_RS15505;Dbxref=GenBank:WP_075670729.1;Name=WP_075670729.1;Ontology_term=GO:0015693,GO:0015095,GO:0016020;gbkey=CDS;gene=mgtE;go_component=membrane|0016020||IEA;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017627917.1;locus_tag=L2557_RS15505;product=magnesium transporter;protein_id=WP_075670729.1;transl_table=11 NZ_JAIKUA010000266.1 RefSeq gene 1521 2036 . - . ID=gene-L2557_RS15510;Name=L2557_RS15510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15510 NZ_JAIKUA010000266.1 Protein Homology CDS 1521 2036 . - 0 ID=cds-WP_143484134.1;Parent=gene-L2557_RS15510;Dbxref=GenBank:WP_143484134.1;Name=WP_143484134.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368246.1;locus_tag=L2557_RS15510;product=SprT family zinc-dependent metalloprotease;protein_id=WP_143484134.1;transl_table=11 NZ_JAIKUA010000266.1 RefSeq gene 2142 2465 . + . ID=gene-L2557_RS15515;Name=L2557_RS15515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15515 NZ_JAIKUA010000266.1 Protein Homology CDS 2142 2465 . + 0 ID=cds-WP_036912417.1;Parent=gene-L2557_RS15515;Dbxref=GenBank:WP_036912417.1;Name=WP_036912417.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248583.1;locus_tag=L2557_RS15515;product=ArsR/SmtB family transcription factor;protein_id=WP_036912417.1;transl_table=11 NZ_JAIKUA010000266.1 RefSeq gene 2469 2903 . + . ID=gene-L2557_RS15520;Name=L2557_RS15520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15520 NZ_JAIKUA010000266.1 Protein Homology CDS 2469 2903 . + 0 ID=cds-WP_075670733.1;Parent=gene-L2557_RS15520;Dbxref=GenBank:WP_075670733.1;Name=WP_075670733.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017627919.1;locus_tag=L2557_RS15520;product=YeeE/YedE family protein;protein_id=WP_075670733.1;transl_table=11 NZ_JAIKUA010000266.1 RefSeq gene 2908 3321 . + . ID=gene-L2557_RS15525;Name=L2557_RS15525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15525 NZ_JAIKUA010000266.1 Protein Homology CDS 2908 3321 . + 0 ID=cds-WP_075670735.1;Parent=gene-L2557_RS15525;Dbxref=GenBank:WP_075670735.1;Name=WP_075670735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248580.1;locus_tag=L2557_RS15525;product=YeeE/YedE family protein;protein_id=WP_075670735.1;transl_table=11 NZ_JAIKUA010000266.1 RefSeq gene 3405 6713 . - . ID=gene-L2557_RS15530;Name=bcsC;gbkey=Gene;gene=bcsC;gene_biotype=protein_coding;locus_tag=L2557_RS15530 NZ_JAIKUA010000266.1 Protein Homology CDS 3405 6713 . - 0 ID=cds-WP_223673994.1;Parent=gene-L2557_RS15530;Dbxref=GenBank:WP_223673994.1;Name=WP_223673994.1;Ontology_term=GO:0030244,GO:0005515,GO:0019867;gbkey=CDS;gene=bcsC;go_component=outer membrane|0019867||IEA;go_function=protein binding|0005515||IEA;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244155.1;locus_tag=L2557_RS15530;product=cellulose synthase complex outer membrane protein BcsC;protein_id=WP_223673994.1;transl_table=11 NZ_JAIKUA010000266.1 RefSeq gene 6717 9038 . - . ID=gene-L2557_RS15535;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=L2557_RS15535 NZ_JAIKUA010000266.1 Protein Homology CDS 6717 9038 . - 0 ID=cds-WP_235410178.1;Parent=gene-L2557_RS15535;Dbxref=GenBank:WP_235410178.1;Name=WP_235410178.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006322991.1;locus_tag=L2557_RS15535;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_235410178.1;transl_table=11 NZ_JAIKUA010000266.1 RefSeq gene 9098 11641 . - . ID=gene-L2557_RS15540;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=L2557_RS15540 NZ_JAIKUA010000266.1 Protein Homology CDS 9098 11641 . - 0 ID=cds-WP_075670938.1;Parent=gene-L2557_RS15540;Dbxref=GenBank:WP_075670938.1;Name=WP_075670938.1;Ontology_term=GO:0006011,GO:0030244,GO:0016760,GO:0035438,GO:0016020;gbkey=CDS;gene=bcsA;go_component=membrane|0016020||IEA;go_function=cellulose synthase (UDP-forming) activity|0016760||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248577.1;locus_tag=L2557_RS15540;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_075670938.1;transl_table=11 NZ_JAIKUA010000266.1 RefSeq gene 11683 12420 . - . ID=gene-L2557_RS15545;Name=L2557_RS15545;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15545 NZ_JAIKUA010000266.1 Protein Homology CDS 11683 12420 . - 0 ID=cds-WP_196728421.1;Parent=gene-L2557_RS15545;Dbxref=GenBank:WP_196728421.1;Name=WP_196728421.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017627923.1;locus_tag=L2557_RS15545;product=cellulose synthase operon protein YhjQ/BcsQ;protein_id=WP_196728421.1;transl_table=11 NZ_JAIKUA010000266.1 RefSeq gene 12429 12620 . - . ID=gene-L2557_RS15550;Name=bcsR;gbkey=Gene;gene=bcsR;gene_biotype=protein_coding;locus_tag=L2557_RS15550 NZ_JAIKUA010000266.1 Protein Homology CDS 12429 12620 . - 0 ID=cds-WP_075670743.1;Parent=gene-L2557_RS15550;Dbxref=GenBank:WP_075670743.1;Name=WP_075670743.1;gbkey=CDS;gene=bcsR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244150.1;locus_tag=L2557_RS15550;product=cellulose biosynthesis protein BcsR;protein_id=WP_075670743.1;transl_table=11 ##sequence-region NZ_JAIKUA010000267.1 1 2130 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000267.1 RefSeq region 1 2130 . + . ID=NZ_JAIKUA010000267.1:1..2130;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000267.1 RefSeq gene 69 806 . - . ID=gene-L2557_RS15555;Name=L2557_RS15555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15555 NZ_JAIKUA010000267.1 Protein Homology CDS 69 806 . - 0 ID=cds-WP_075674218.1;Parent=gene-L2557_RS15555;Dbxref=GenBank:WP_075674218.1;Name=WP_075674218.1;Ontology_term=GO:0006282,GO:0006355,GO:0003677,GO:0003700,GO:0004252;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,serine-type endopeptidase activity|0004252||IEA;go_process=regulation of DNA repair|0006282||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248370.1;locus_tag=L2557_RS15555;product=LexA family transcriptional regulator;protein_id=WP_075674218.1;transl_table=11 NZ_JAIKUA010000267.1 RefSeq gene 1045 1860 . + . ID=gene-L2557_RS15560;Name=L2557_RS15560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15560 NZ_JAIKUA010000267.1 Protein Homology CDS 1045 1860 . + 0 ID=cds-WP_099660645.1;Parent=gene-L2557_RS15560;Dbxref=GenBank:WP_099660645.1;Name=WP_099660645.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248368.1;locus_tag=L2557_RS15560;product=antitermination protein Q;protein_id=WP_099660645.1;transl_table=11 ##sequence-region NZ_JAIKUA010000268.1 1 5109 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000268.1 RefSeq region 1 5109 . + . ID=NZ_JAIKUA010000268.1:1..5109;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000268.1 RefSeq gene 55 1128 . + . ID=gene-L2557_RS15565;Name=L2557_RS15565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15565 NZ_JAIKUA010000268.1 Protein Homology CDS 55 1128 . + 0 ID=cds-WP_159364005.1;Parent=gene-L2557_RS15565;Dbxref=GenBank:WP_159364005.1;Name=WP_159364005.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367911.1;locus_tag=L2557_RS15565;product=HlyD family secretion protein;protein_id=WP_159364005.1;transl_table=11 NZ_JAIKUA010000268.1 RefSeq gene 1137 3893 . + . ID=gene-L2557_RS15570;Name=rbbA;gbkey=Gene;gene=rbbA;gene_biotype=protein_coding;locus_tag=L2557_RS15570 NZ_JAIKUA010000268.1 Protein Homology CDS 1137 3893 . + 0 ID=cds-WP_075673123.1;Parent=gene-L2557_RS15570;Dbxref=GenBank:WP_075673123.1;Name=WP_075673123.1;Ontology_term=GO:0055085,GO:0005524,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;gene=rbbA;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251251.1;locus_tag=L2557_RS15570;product=ribosome-associated ATPase/putative transporter RbbA;protein_id=WP_075673123.1;transl_table=11 NZ_JAIKUA010000268.1 RefSeq gene 3894 5021 . + . ID=gene-L2557_RS15575;Name=L2557_RS15575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15575 NZ_JAIKUA010000268.1 Protein Homology CDS 3894 5021 . + 0 ID=cds-WP_099660390.1;Parent=gene-L2557_RS15575;Dbxref=GenBank:WP_099660390.1;Name=WP_099660390.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658324.1;locus_tag=L2557_RS15575;product=ABC transporter permease;protein_id=WP_099660390.1;transl_table=11 ##sequence-region NZ_JAIKUA010000269.1 1 3465 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000269.1 RefSeq region 1 3465 . + . ID=NZ_JAIKUA010000269.1:1..3465;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000269.1 RefSeq gene 43 912 . - . ID=gene-L2557_RS15580;Name=L2557_RS15580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15580 NZ_JAIKUA010000269.1 Protein Homology CDS 43 912 . - 0 ID=cds-WP_075673324.1;Parent=gene-L2557_RS15580;Dbxref=GenBank:WP_075673324.1;Name=WP_075673324.1;Ontology_term=GO:0005975,GO:0005524,GO:0008974;gbkey=CDS;go_function=ATP binding|0005524||IEA,phosphoribulokinase activity|0008974||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534664.1;locus_tag=L2557_RS15580;product=phosphoribulokinase;protein_id=WP_075673324.1;transl_table=11 NZ_JAIKUA010000269.1 RefSeq gene 978 1199 . - . ID=gene-L2557_RS15585;Name=L2557_RS15585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15585 NZ_JAIKUA010000269.1 Protein Homology CDS 978 1199 . - 0 ID=cds-WP_075673323.1;Parent=gene-L2557_RS15585;Dbxref=GenBank:WP_075673323.1;Name=WP_075673323.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246876.1;locus_tag=L2557_RS15585;product=YheU family protein;protein_id=WP_075673323.1;transl_table=11 NZ_JAIKUA010000269.1 RefSeq gene 1196 2176 . - . ID=gene-L2557_RS15590;Name=L2557_RS15590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15590 NZ_JAIKUA010000269.1 Protein Homology CDS 1196 2176 . - 0 ID=cds-WP_075673322.1;Parent=gene-L2557_RS15590;Dbxref=GenBank:WP_075673322.1;Name=WP_075673322.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246877.1;locus_tag=L2557_RS15590;product=hydrolase;protein_id=WP_075673322.1;transl_table=11 NZ_JAIKUA010000269.1 RefSeq gene 2276 2881 . + . ID=gene-L2557_RS15595;Name=L2557_RS15595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15595 NZ_JAIKUA010000269.1 Protein Homology CDS 2276 2881 . + 0 ID=cds-WP_235410179.1;Parent=gene-L2557_RS15595;Dbxref=GenBank:WP_235410179.1;Name=WP_235410179.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368518.1;locus_tag=L2557_RS15595;product=LysE family translocator;protein_id=WP_235410179.1;transl_table=11 ##sequence-region NZ_JAIKUA010000027.1 1 22752 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000027.1 RefSeq region 1 22752 . + . ID=NZ_JAIKUA010000027.1:1..22752;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000027.1 RefSeq gene 154 840 . + . ID=gene-L2557_RS02830;Name=L2557_RS02830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02830 NZ_JAIKUA010000027.1 Protein Homology CDS 154 840 . + 0 ID=cds-WP_075673976.1;Parent=gene-L2557_RS02830;Dbxref=GenBank:WP_075673976.1;Name=WP_075673976.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249867.1;locus_tag=L2557_RS02830;product=FadR/GntR family transcriptional regulator;protein_id=WP_075673976.1;transl_table=11 NZ_JAIKUA010000027.1 RefSeq gene 923 2317 . + . ID=gene-L2557_RS02835;Name=mdtD;gbkey=Gene;gene=mdtD;gene_biotype=protein_coding;locus_tag=L2557_RS02835 NZ_JAIKUA010000027.1 Protein Homology CDS 923 2317 . + 0 ID=cds-WP_075673975.1;Parent=gene-L2557_RS02835;Dbxref=GenBank:WP_075673975.1;Name=WP_075673975.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=mdtD;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008913720.1;locus_tag=L2557_RS02835;product=multidrug transporter subunit MdtD;protein_id=WP_075673975.1;transl_table=11 NZ_JAIKUA010000027.1 RefSeq gene 2383 3312 . - . ID=gene-L2557_RS02840;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=L2557_RS02840 NZ_JAIKUA010000027.1 Protein Homology CDS 2383 3312 . - 0 ID=cds-WP_159363645.1;Parent=gene-L2557_RS02840;Dbxref=GenBank:WP_159363645.1;Name=WP_159363645.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534360.1;locus_tag=L2557_RS02840;product=ribokinase;protein_id=WP_159363645.1;transl_table=11 NZ_JAIKUA010000027.1 RefSeq gene 3594 5093 . + . ID=gene-L2557_RS02845;Name=ravA;gbkey=Gene;gene=ravA;gene_biotype=protein_coding;locus_tag=L2557_RS02845 NZ_JAIKUA010000027.1 Protein Homology CDS 3594 5093 . + 0 ID=cds-WP_075673973.1;Parent=gene-L2557_RS02845;Dbxref=GenBank:WP_075673973.1;Name=WP_075673973.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;gene=ravA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628746.1;locus_tag=L2557_RS02845;product=ATPase RavA;protein_id=WP_075673973.1;transl_table=11 NZ_JAIKUA010000027.1 RefSeq gene 5101 6558 . + . ID=gene-L2557_RS02850;Name=viaA;gbkey=Gene;gene=viaA;gene_biotype=protein_coding;locus_tag=L2557_RS02850 NZ_JAIKUA010000027.1 Protein Homology CDS 5101 6558 . + 0 ID=cds-WP_075673972.1;Parent=gene-L2557_RS02850;Dbxref=GenBank:WP_075673972.1;Name=WP_075673972.1;gbkey=CDS;gene=viaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004875728.1;locus_tag=L2557_RS02850;product=ATPase RavA stimulator ViaA;protein_id=WP_075673972.1;transl_table=11 NZ_JAIKUA010000027.1 RefSeq gene 6559 7551 . - . ID=gene-L2557_RS02855;Name=asnA;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=L2557_RS02855 NZ_JAIKUA010000027.1 Protein Homology CDS 6559 7551 . - 0 ID=cds-WP_075673971.1;Parent=gene-L2557_RS02855;Dbxref=GenBank:WP_075673971.1;Name=WP_075673971.1;Ontology_term=GO:0070981,GO:0004071,GO:0005737;gbkey=CDS;gene=asnA;go_component=cytoplasm|0005737||IEA;go_function=aspartate-ammonia ligase activity|0004071||IEA;go_process=L-asparagine biosynthetic process|0070981||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249870.1;locus_tag=L2557_RS02855;product=aspartate--ammonia ligase;protein_id=WP_075673971.1;transl_table=11 NZ_JAIKUA010000027.1 RefSeq gene 7711 8172 . + . ID=gene-L2557_RS02860;Name=asnC;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=L2557_RS02860 NZ_JAIKUA010000027.1 Protein Homology CDS 7711 8172 . + 0 ID=cds-WP_023583317.1;Parent=gene-L2557_RS02860;Dbxref=GenBank:WP_023583317.1;Name=WP_023583317.1;Ontology_term=GO:0043565;gbkey=CDS;gene=asnC;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011144463.1;locus_tag=L2557_RS02860;product=transcriptional regulator AsnC;protein_id=WP_023583317.1;transl_table=11 NZ_JAIKUA010000027.1 RefSeq gene 8273 8713 . + . ID=gene-L2557_RS02865;Name=mioC;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=L2557_RS02865 NZ_JAIKUA010000027.1 Protein Homology CDS 8273 8713 . + 0 ID=cds-WP_075673970.1;Parent=gene-L2557_RS02865;Dbxref=GenBank:WP_075673970.1;Name=WP_075673970.1;Ontology_term=GO:0010181;gbkey=CDS;gene=mioC;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534353.1;locus_tag=L2557_RS02865;product=FMN-binding protein MioC;protein_id=WP_075673970.1;transl_table=11 NZ_JAIKUA010000027.1 RefSeq gene 9091 10989 . + . ID=gene-L2557_RS02870;Name=mnmG;gbkey=Gene;gene=mnmG;gene_biotype=protein_coding;locus_tag=L2557_RS02870 NZ_JAIKUA010000027.1 Protein Homology CDS 9091 10989 . + 0 ID=cds-WP_075673969.1;Parent=gene-L2557_RS02870;Dbxref=GenBank:WP_075673969.1;Name=WP_075673969.1;Ontology_term=GO:0002098,GO:0008033;gbkey=CDS;gene=mnmG;go_process=tRNA wobble uridine modification|0002098||IEA,tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628745.1;locus_tag=L2557_RS02870;product=tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG;protein_id=WP_075673969.1;transl_table=11 NZ_JAIKUA010000027.1 RefSeq gene 10986 11612 . + . ID=gene-L2557_RS02875;Name=rsmG;gbkey=Gene;gene=rsmG;gene_biotype=protein_coding;locus_tag=L2557_RS02875 NZ_JAIKUA010000027.1 Protein Homology CDS 10986 11612 . + 0 ID=cds-WP_075673968.1;Parent=gene-L2557_RS02875;Dbxref=GenBank:WP_075673968.1;Name=WP_075673968.1;Ontology_term=GO:0031167,GO:0046118,GO:0008168;gbkey=CDS;gene=rsmG;go_function=methyltransferase activity|0008168||IEA;go_process=rRNA methylation|0031167||IEA,7-methylguanosine biosynthetic process|0046118||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004240213.1;locus_tag=L2557_RS02875;product=16S rRNA (guanine(527)-N(7))-methyltransferase RsmG;protein_id=WP_075673968.1;transl_table=11 NZ_JAIKUA010000027.1 RefSeq gene 12226 12603 . + . ID=gene-L2557_RS02880;Name=atpI;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=L2557_RS02880 NZ_JAIKUA010000027.1 Protein Homology CDS 12226 12603 . + 0 ID=cds-WP_075673967.1;Parent=gene-L2557_RS02880;Dbxref=GenBank:WP_075673967.1;Name=WP_075673967.1;gbkey=CDS;gene=atpI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246598.1;locus_tag=L2557_RS02880;product=F0F1 ATP synthase subunit I;protein_id=WP_075673967.1;transl_table=11 NZ_JAIKUA010000027.1 RefSeq gene 12635 13459 . + . ID=gene-L2557_RS02885;Name=atpB;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=L2557_RS02885 NZ_JAIKUA010000027.1 Protein Homology CDS 12635 13459 . + 0 ID=cds-WP_023583322.1;Parent=gene-L2557_RS02885;Dbxref=GenBank:WP_023583322.1;Name=WP_023583322.1;Ontology_term=GO:0015986,GO:0015078,GO:0045259;gbkey=CDS;gene=atpB;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228150.1;locus_tag=L2557_RS02885;product=F0F1 ATP synthase subunit A;protein_id=WP_023583322.1;transl_table=11 NZ_JAIKUA010000027.1 RefSeq gene 13505 13744 . + . ID=gene-L2557_RS02890;Name=atpE;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=L2557_RS02890 NZ_JAIKUA010000027.1 Protein Homology CDS 13505 13744 . + 0 ID=cds-WP_004246596.1;Parent=gene-L2557_RS02890;Dbxref=GenBank:WP_004246596.1;Name=WP_004246596.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpE;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246596.1;locus_tag=L2557_RS02890;product=F0F1 ATP synthase subunit C;protein_id=WP_004246596.1;transl_table=11 NZ_JAIKUA010000027.1 RefSeq gene 13806 14276 . + . ID=gene-L2557_RS02895;Name=atpF;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=L2557_RS02895 NZ_JAIKUA010000027.1 Protein Homology CDS 13806 14276 . + 0 ID=cds-WP_036914499.1;Parent=gene-L2557_RS02895;Dbxref=GenBank:WP_036914499.1;Name=WP_036914499.1;Ontology_term=GO:0015986,GO:0015078;gbkey=CDS;gene=atpF;go_function=proton transmembrane transporter activity|0015078||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001052215.1;locus_tag=L2557_RS02895;product=F0F1 ATP synthase subunit B;protein_id=WP_036914499.1;transl_table=11 NZ_JAIKUA010000027.1 RefSeq gene 14289 14822 . + . ID=gene-L2557_RS02900;Name=atpH;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=L2557_RS02900 NZ_JAIKUA010000027.1 Protein Homology CDS 14289 14822 . + 0 ID=cds-WP_006534344.1;Parent=gene-L2557_RS02900;Dbxref=GenBank:WP_006534344.1;Name=WP_006534344.1;Ontology_term=GO:0015986,GO:0046933,GO:0016020;gbkey=CDS;gene=atpH;go_component=membrane|0016020||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011144456.1;locus_tag=L2557_RS02900;product=F0F1 ATP synthase subunit delta;protein_id=WP_006534344.1;transl_table=11 NZ_JAIKUA010000027.1 RefSeq gene 14837 16378 . + . ID=gene-L2557_RS02905;Name=atpA;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=L2557_RS02905 NZ_JAIKUA010000027.1 Protein Homology CDS 14837 16378 . + 0 ID=cds-WP_075673966.1;Parent=gene-L2557_RS02905;Dbxref=GenBank:WP_075673966.1;Name=WP_075673966.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpA;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001176751.1;locus_tag=L2557_RS02905;product=F0F1 ATP synthase subunit alpha;protein_id=WP_075673966.1;transl_table=11 NZ_JAIKUA010000027.1 RefSeq gene 16437 17300 . + . ID=gene-L2557_RS02910;Name=atpG;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=L2557_RS02910 NZ_JAIKUA010000027.1 Protein Homology CDS 16437 17300 . + 0 ID=cds-WP_006534342.1;Parent=gene-L2557_RS02910;Dbxref=GenBank:WP_006534342.1;Name=WP_006534342.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpG;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020882764.1;locus_tag=L2557_RS02910;product=F0F1 ATP synthase subunit gamma;protein_id=WP_006534342.1;transl_table=11 NZ_JAIKUA010000027.1 RefSeq gene 17335 18717 . + . ID=gene-L2557_RS02915;Name=atpD;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=L2557_RS02915 NZ_JAIKUA010000027.1 Protein Homology CDS 17335 18717 . + 0 ID=cds-WP_023583323.1;Parent=gene-L2557_RS02915;Dbxref=GenBank:WP_023583323.1;Name=WP_023583323.1;Ontology_term=GO:0015986,GO:0046933,GO:0045259;gbkey=CDS;gene=atpD;go_component=proton-transporting ATP synthase complex|0045259||IEA;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312701.1;locus_tag=L2557_RS02915;product=F0F1 ATP synthase subunit beta;protein_id=WP_023583323.1;transl_table=11 NZ_JAIKUA010000027.1 RefSeq gene 18739 19155 . + . ID=gene-L2557_RS02920;Name=L2557_RS02920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02920 NZ_JAIKUA010000027.1 Protein Homology CDS 18739 19155 . + 0 ID=cds-WP_006534340.1;Parent=gene-L2557_RS02920;Dbxref=GenBank:WP_006534340.1;Name=WP_006534340.1;Ontology_term=GO:0015986,GO:0046933;gbkey=CDS;go_function=proton-transporting ATP synthase activity%2C rotational mechanism|0046933||IEA;go_process=proton motive force-driven ATP synthesis|0015986||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534340.1;locus_tag=L2557_RS02920;product=F0F1 ATP synthase subunit epsilon;protein_id=WP_006534340.1;transl_table=11 NZ_JAIKUA010000027.1 RefSeq gene 19308 20681 . + . ID=gene-L2557_RS02925;Name=glmU;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=L2557_RS02925 NZ_JAIKUA010000027.1 Protein Homology CDS 19308 20681 . + 0 ID=cds-WP_235409780.1;Parent=gene-L2557_RS02925;Dbxref=GenBank:WP_235409780.1;Name=WP_235409780.1;Ontology_term=GO:0000902,GO:0006048,GO:0009252,GO:0000287,GO:0003977,GO:0019134;gbkey=CDS;gene=glmU;go_function=magnesium ion binding|0000287||IEA,UDP-N-acetylglucosamine diphosphorylase activity|0003977||IEA,glucosamine-1-phosphate N-acetyltransferase activity|0019134||IEA;go_process=cell morphogenesis|0000902||IEA,UDP-N-acetylglucosamine biosynthetic process|0006048||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246587.1;locus_tag=L2557_RS02925;product=bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU;protein_id=WP_235409780.1;transl_table=11 NZ_JAIKUA010000027.1 RefSeq gene 20841 22667 . + . ID=gene-L2557_RS02930;Name=glmS;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=L2557_RS02930 NZ_JAIKUA010000027.1 Protein Homology CDS 20841 22667 . + 0 ID=cds-WP_099659559.1;Parent=gene-L2557_RS02930;Dbxref=GenBank:WP_099659559.1;Name=WP_099659559.1;Ontology_term=GO:1901137,GO:0004360;gbkey=CDS;gene=glmS;go_function=glutamine-fructose-6-phosphate transaminase (isomerizing) activity|0004360||IEA;go_process=carbohydrate derivative biosynthetic process|1901137||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005121462.1;locus_tag=L2557_RS02930;product=glutamine--fructose-6-phosphate transaminase (isomerizing);protein_id=WP_099659559.1;transl_table=11 ##sequence-region NZ_JAIKUA010000270.1 1 11092 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000270.1 RefSeq region 1 11092 . + . ID=NZ_JAIKUA010000270.1:1..11092;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000270.1 RefSeq gene 223 2283 . - . ID=gene-L2557_RS15600;Name=prc;gbkey=Gene;gene=prc;gene_biotype=protein_coding;gene_synonym=tsp;locus_tag=L2557_RS15600 NZ_JAIKUA010000270.1 Protein Homology CDS 223 2283 . - 0 ID=cds-WP_075673374.1;Parent=gene-L2557_RS15600;Dbxref=GenBank:WP_075673374.1;Name=WP_075673374.1;Ontology_term=GO:0006508,GO:0005515,GO:0008236;gbkey=CDS;gene=prc;go_function=protein binding|0005515||IEA,serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242574.1;locus_tag=L2557_RS15600;product=carboxy terminal-processing peptidase;protein_id=WP_075673374.1;transl_table=11 NZ_JAIKUA010000270.1 RefSeq gene 2303 2998 . - . ID=gene-L2557_RS15605;Name=proQ;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=L2557_RS15605 NZ_JAIKUA010000270.1 Protein Homology CDS 2303 2998 . - 0 ID=cds-WP_075673375.1;Parent=gene-L2557_RS15605;Dbxref=GenBank:WP_075673375.1;Name=WP_075673375.1;Ontology_term=GO:0010608,GO:0003723,GO:0033592,GO:0034057;gbkey=CDS;gene=proQ;go_function=RNA binding|0003723||IEA,RNA strand annealing activity|0033592||IEA,RNA strand-exchange activity|0034057||IEA;go_process=post-transcriptional regulation of gene expression|0010608||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242572.1;locus_tag=L2557_RS15605;product=RNA chaperone ProQ;protein_id=WP_075673375.1;transl_table=11 NZ_JAIKUA010000270.1 RefSeq gene 3094 3591 . - . ID=gene-L2557_RS15610;Name=L2557_RS15610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15610 NZ_JAIKUA010000270.1 Protein Homology CDS 3094 3591 . - 0 ID=cds-WP_075673376.1;Parent=gene-L2557_RS15610;Dbxref=GenBank:WP_075673376.1;Name=WP_075673376.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011146906.1;locus_tag=L2557_RS15610;product=GAF domain-containing protein;protein_id=WP_075673376.1;transl_table=11 NZ_JAIKUA010000270.1 RefSeq gene 3870 5126 . + . ID=gene-L2557_RS15615;Name=yebS;gbkey=Gene;gene=yebS;gene_biotype=protein_coding;locus_tag=L2557_RS15615 NZ_JAIKUA010000270.1 Protein Homology CDS 3870 5126 . + 0 ID=cds-WP_196576371.1;Parent=gene-L2557_RS15615;Dbxref=GenBank:WP_196576371.1;Name=WP_196576371.1;gbkey=CDS;gene=yebS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242569.1;locus_tag=L2557_RS15615;product=membrane integrity lipid transport subunit YebS;protein_id=WP_196576371.1;transl_table=11 NZ_JAIKUA010000270.1 RefSeq gene 5068 7386 . + . ID=gene-L2557_RS15620;Name=L2557_RS15620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15620 NZ_JAIKUA010000270.1 Protein Homology CDS 5068 7386 . + 0 ID=cds-WP_075673378.1;Parent=gene-L2557_RS15620;Dbxref=GenBank:WP_075673378.1;Name=WP_075673378.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242568.1;locus_tag=L2557_RS15620;product=PqiB family protein;protein_id=WP_075673378.1;transl_table=11 NZ_JAIKUA010000270.1 RefSeq gene 7597 7839 . + . ID=gene-L2557_RS15625;Name=L2557_RS15625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15625 NZ_JAIKUA010000270.1 Protein Homology CDS 7597 7839 . + 0 ID=cds-WP_075673379.1;Parent=gene-L2557_RS15625;Dbxref=GenBank:WP_075673379.1;Name=WP_075673379.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242567.1;locus_tag=L2557_RS15625;product=DUF1480 family protein;protein_id=WP_075673379.1;transl_table=11 NZ_JAIKUA010000270.1 RefSeq gene 8143 8487 . - . ID=gene-L2557_RS15630;Name=L2557_RS15630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15630 NZ_JAIKUA010000270.1 Protein Homology CDS 8143 8487 . - 0 ID=cds-WP_075673380.1;Parent=gene-L2557_RS15630;Dbxref=GenBank:WP_075673380.1;Name=WP_075673380.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242565.1;locus_tag=L2557_RS15630;product=YebY family protein;protein_id=WP_075673380.1;transl_table=11 NZ_JAIKUA010000270.1 RefSeq gene 8535 9431 . - . ID=gene-L2557_RS15635;Name=copD;gbkey=Gene;gene=copD;gene_biotype=protein_coding;locus_tag=L2557_RS15635 NZ_JAIKUA010000270.1 Protein Homology CDS 8535 9431 . - 0 ID=cds-WP_223673673.1;Parent=gene-L2557_RS15635;Dbxref=GenBank:WP_223673673.1;Name=WP_223673673.1;Ontology_term=GO:0006825,GO:0016020;gbkey=CDS;gene=copD;go_component=membrane|0016020||IEA;go_process=copper ion transport|0006825||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251471.1;locus_tag=L2557_RS15635;product=copper homeostasis membrane protein CopD;protein_id=WP_223673673.1;transl_table=11 NZ_JAIKUA010000270.1 RefSeq gene 9431 9823 . - . ID=gene-L2557_RS15640;Name=copC;gbkey=Gene;gene=copC;gene_biotype=protein_coding;locus_tag=L2557_RS15640 NZ_JAIKUA010000270.1 Protein Homology CDS 9431 9823 . - 0 ID=cds-WP_023582413.1;Parent=gene-L2557_RS15640;Dbxref=GenBank:WP_023582413.1;Name=WP_023582413.1;Ontology_term=GO:0006825,GO:0046688,GO:0005507,GO:0042597;gbkey=CDS;gene=copC;go_component=periplasmic space|0042597||IEA;go_function=copper ion binding|0005507||IEA;go_process=copper ion transport|0006825||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004713112.1;locus_tag=L2557_RS15640;product=copper homeostasis periplasmic binding protein CopC;protein_id=WP_023582413.1;transl_table=11 NZ_JAIKUA010000270.1 RefSeq gene 10259 10762 . - . ID=gene-L2557_RS15645;Name=ftnA;gbkey=Gene;gene=ftnA;gene_biotype=protein_coding;locus_tag=L2557_RS15645 NZ_JAIKUA010000270.1 Protein Homology CDS 10259 10762 . - 0 ID=cds-WP_075673382.1;Parent=gene-L2557_RS15645;Dbxref=GenBank:WP_075673382.1;Name=WP_075673382.1;Ontology_term=GO:0006879,GO:0008199;gbkey=CDS;gene=ftnA;go_function=ferric iron binding|0008199||IEA;go_process=intracellular iron ion homeostasis|0006879||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242561.1;locus_tag=L2557_RS15645;product=non-heme ferritin;protein_id=WP_075673382.1;transl_table=11 ##sequence-region NZ_JAIKUA010000271.1 1 1665 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000271.1 RefSeq region 1 1665 . + . ID=NZ_JAIKUA010000271.1:1..1665;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000271.1 RefSeq gene 168 255 . - . ID=gene-L2557_RS15650;Name=L2557_RS15650;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS15650 NZ_JAIKUA010000271.1 tRNAscan-SE tRNA 168 255 . - . ID=rna-L2557_RS15650;Parent=gene-L2557_RS15650;anticodon=(pos:complement(219..221));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS15650;product=tRNA-Ser NZ_JAIKUA010000271.1 tRNAscan-SE exon 168 255 . - . ID=exon-L2557_RS15650-1;Parent=rna-L2557_RS15650;anticodon=(pos:complement(219..221));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS15650;product=tRNA-Ser NZ_JAIKUA010000271.1 RefSeq gene 571 1512 . + . ID=gene-L2557_RS15655;Name=ghrA;gbkey=Gene;gene=ghrA;gene_biotype=protein_coding;locus_tag=L2557_RS15655 NZ_JAIKUA010000271.1 Protein Homology CDS 571 1512 . + 0 ID=cds-WP_075671023.1;Parent=gene-L2557_RS15655;Dbxref=GenBank:WP_075671023.1;Name=WP_075671023.1;Ontology_term=GO:0016618,GO:0030267,GO:0051287;gbkey=CDS;gene=ghrA;go_function=hydroxypyruvate reductase [NAD(P)H] activity|0016618||IEA,glyoxylate reductase (NADPH) activity|0030267||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011146341.1;locus_tag=L2557_RS15655;product=glyoxylate/hydroxypyruvate reductase GhrA;protein_id=WP_075671023.1;transl_table=11 ##sequence-region NZ_JAIKUA010000272.1 1 2828 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000272.1 RefSeq region 1 2828 . + . ID=NZ_JAIKUA010000272.1:1..2828;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000272.1 RefSeq gene 129 1064 . - . ID=gene-L2557_RS15660;Name=L2557_RS15660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15660 NZ_JAIKUA010000272.1 Protein Homology CDS 129 1064 . - 0 ID=cds-WP_023582641.1;Parent=gene-L2557_RS15660;Dbxref=GenBank:WP_023582641.1;Name=WP_023582641.1;Ontology_term=GO:0016024,GO:0004605;gbkey=CDS;go_function=phosphatidate cytidylyltransferase activity|0004605||IEA;go_process=CDP-diacylglycerol biosynthetic process|0016024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244293.1;locus_tag=L2557_RS15660;product=phosphatidate cytidylyltransferase;protein_id=WP_023582641.1;transl_table=11 NZ_JAIKUA010000272.1 RefSeq gene 1051 1773 . - . ID=gene-L2557_RS15665;Name=L2557_RS15665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15665 NZ_JAIKUA010000272.1 Protein Homology CDS 1051 1773 . - 0 ID=cds-WP_099660082.1;Parent=gene-L2557_RS15665;Dbxref=GenBank:WP_099660082.1;Name=WP_099660082.1;Ontology_term=GO:0008654,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014701598.1;locus_tag=L2557_RS15665;product=lysophospholipid acyltransferase family protein;protein_id=WP_099660082.1;transl_table=11 NZ_JAIKUA010000272.1 RefSeq gene 1777 2439 . - . ID=gene-L2557_RS15670;Name=L2557_RS15670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15670 NZ_JAIKUA010000272.1 Protein Homology CDS 1777 2439 . - 0 ID=cds-WP_075673300.1;Parent=gene-L2557_RS15670;Dbxref=GenBank:WP_075673300.1;Name=WP_075673300.1;Ontology_term=GO:0008654,GO:0000287,GO:0016780,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=magnesium ion binding|0000287||IEA,phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244291.1;locus_tag=L2557_RS15670;product=CDP-alcohol phosphatidyltransferase family protein;protein_id=WP_075673300.1;transl_table=11 ##sequence-region NZ_JAIKUA010000273.1 1 500 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000273.1 RefSeq region 1 500 . + . ID=NZ_JAIKUA010000273.1:1..500;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000273.1 RefSeq gene 165 500 . + . ID=gene-L2557_RS15675;Name=L2557_RS15675;end_range=500,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15675;partial=true NZ_JAIKUA010000273.1 Protein Homology CDS 165 500 . + 0 ID=cds-WP_235410180.1;Parent=gene-L2557_RS15675;Dbxref=GenBank:WP_235410180.1;Name=WP_235410180.1;end_range=500,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628085.1;locus_tag=L2557_RS15675;partial=true;product=DUF4377 domain-containing protein;protein_id=WP_235410180.1;transl_table=11 ##sequence-region NZ_JAIKUA010000274.1 1 12207 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000274.1 RefSeq region 1 12207 . + . ID=NZ_JAIKUA010000274.1:1..12207;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000274.1 RefSeq gene 80 604 . + . ID=gene-L2557_RS15680;Name=L2557_RS15680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15680 NZ_JAIKUA010000274.1 Protein Homology CDS 80 604 . + 0 ID=cds-WP_075673279.1;Parent=gene-L2557_RS15680;Dbxref=GenBank:WP_075673279.1;Name=WP_075673279.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244318.1;locus_tag=L2557_RS15680;product=fimbrial protein;protein_id=WP_075673279.1;transl_table=11 NZ_JAIKUA010000274.1 RefSeq gene 673 1341 . + . ID=gene-L2557_RS15685;Name=L2557_RS15685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15685 NZ_JAIKUA010000274.1 Protein Homology CDS 673 1341 . + 0 ID=cds-WP_235410181.1;Parent=gene-L2557_RS15685;Dbxref=GenBank:WP_235410181.1;Name=WP_235410181.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244317.1;locus_tag=L2557_RS15685;product=fimbrial biogenesis chaperone;protein_id=WP_235410181.1;transl_table=11 NZ_JAIKUA010000274.1 RefSeq gene 1366 3873 . + . ID=gene-L2557_RS15690;Name=L2557_RS15690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15690 NZ_JAIKUA010000274.1 Protein Homology CDS 1366 3873 . + 0 ID=cds-WP_223673917.1;Parent=gene-L2557_RS15690;Dbxref=GenBank:WP_223673917.1;Name=WP_223673917.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659634.1;locus_tag=L2557_RS15690;product=fimbria/pilus outer membrane usher protein;protein_id=WP_223673917.1;transl_table=11 NZ_JAIKUA010000274.1 RefSeq gene 3960 4481 . + . ID=gene-L2557_RS15695;Name=L2557_RS15695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15695 NZ_JAIKUA010000274.1 Protein Homology CDS 3960 4481 . + 0 ID=cds-WP_099660072.1;Parent=gene-L2557_RS15695;Dbxref=GenBank:WP_099660072.1;Name=WP_099660072.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813797.1;locus_tag=L2557_RS15695;product=fimbrial protein;protein_id=WP_099660072.1;transl_table=11 NZ_JAIKUA010000274.1 RefSeq gene 4494 4991 . + . ID=gene-L2557_RS15700;Name=L2557_RS15700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15700 NZ_JAIKUA010000274.1 Protein Homology CDS 4494 4991 . + 0 ID=cds-WP_099660073.1;Parent=gene-L2557_RS15700;Dbxref=GenBank:WP_099660073.1;Name=WP_099660073.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244312.1;locus_tag=L2557_RS15700;product=fimbrial protein;protein_id=WP_099660073.1;transl_table=11 NZ_JAIKUA010000274.1 RefSeq gene 5013 5306 . + . ID=gene-L2557_RS15705;Name=L2557_RS15705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15705 NZ_JAIKUA010000274.1 Protein Homology CDS 5013 5306 . + 0 ID=cds-WP_075673284.1;Parent=gene-L2557_RS15705;Dbxref=GenBank:WP_075673284.1;Name=WP_075673284.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248670.1;locus_tag=L2557_RS15705;product=helix-turn-helix domain-containing protein;protein_id=WP_075673284.1;transl_table=11 NZ_JAIKUA010000274.1 RefSeq gene 5287 6270 . + . ID=gene-L2557_RS15710;Name=L2557_RS15710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15710 NZ_JAIKUA010000274.1 Protein Homology CDS 5287 6270 . + 0 ID=cds-WP_099660075.1;Parent=gene-L2557_RS15710;Dbxref=GenBank:WP_099660075.1;Name=WP_099660075.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827518.1;locus_tag=L2557_RS15710;product=fimbrial protein;protein_id=WP_099660075.1;transl_table=11 NZ_JAIKUA010000274.1 RefSeq gene 6319 6621 . + . ID=gene-L2557_RS15715;Name=L2557_RS15715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15715 NZ_JAIKUA010000274.1 Protein Homology CDS 6319 6621 . + 0 ID=cds-WP_075673286.1;Parent=gene-L2557_RS15715;Dbxref=GenBank:WP_075673286.1;Name=WP_075673286.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248668.1;locus_tag=L2557_RS15715;product=helix-turn-helix domain-containing protein;protein_id=WP_075673286.1;transl_table=11 NZ_JAIKUA010000274.1 RefSeq gene 6692 8164 . - . ID=gene-L2557_RS15720;Name=L2557_RS15720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15720 NZ_JAIKUA010000274.1 Protein Homology CDS 6692 8164 . - 0 ID=cds-WP_109395419.1;Parent=gene-L2557_RS15720;Dbxref=GenBank:WP_109395419.1;Name=WP_109395419.1;Ontology_term=GO:0022857,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004950104.1;locus_tag=L2557_RS15720;product=anion permease;protein_id=WP_109395419.1;transl_table=11 NZ_JAIKUA010000274.1 RefSeq gene 8686 9591 . + . ID=gene-L2557_RS15725;Name=L2557_RS15725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15725 NZ_JAIKUA010000274.1 Protein Homology CDS 8686 9591 . + 0 ID=cds-WP_075673288.1;Parent=gene-L2557_RS15725;Dbxref=GenBank:WP_075673288.1;Name=WP_075673288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248666.1;locus_tag=L2557_RS15725;product=LysR substrate-binding domain-containing protein;protein_id=WP_075673288.1;transl_table=11 NZ_JAIKUA010000274.1 RefSeq gene 9667 10539 . - . ID=gene-L2557_RS15730;Name=L2557_RS15730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15730 NZ_JAIKUA010000274.1 Protein Homology CDS 9667 10539 . - 0 ID=cds-WP_223673919.1;Parent=gene-L2557_RS15730;Dbxref=GenBank:WP_223673919.1;Name=WP_223673919.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004240918.1;locus_tag=L2557_RS15730;product=pirin family protein;protein_id=WP_223673919.1;transl_table=11 NZ_JAIKUA010000274.1 RefSeq gene 10807 11484 . + . ID=gene-L2557_RS15735;Name=L2557_RS15735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15735 NZ_JAIKUA010000274.1 Protein Homology CDS 10807 11484 . + 0 ID=cds-WP_223673920.1;Parent=gene-L2557_RS15735;Dbxref=GenBank:WP_223673920.1;Name=WP_223673920.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226229.1;locus_tag=L2557_RS15735;product=hydrolase;protein_id=WP_223673920.1;transl_table=11 NZ_JAIKUA010000274.1 RefSeq gene 11590 12156 . + . ID=gene-L2557_RS15740;Name=L2557_RS15740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15740 NZ_JAIKUA010000274.1 Protein Homology CDS 11590 12156 . + 0 ID=cds-WP_223673921.1;Parent=gene-L2557_RS15740;Dbxref=GenBank:WP_223673921.1;Name=WP_223673921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004916073.1;locus_tag=L2557_RS15740;product=YceI family protein;protein_id=WP_223673921.1;transl_table=11 ##sequence-region NZ_JAIKUA010000275.1 1 3671 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000275.1 RefSeq region 1 3671 . + . ID=NZ_JAIKUA010000275.1:1..3671;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000275.1 RefSeq gene 68 1129 . - . ID=gene-L2557_RS15745;Name=L2557_RS15745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15745 NZ_JAIKUA010000275.1 Protein Homology CDS 68 1129 . - 0 ID=cds-WP_159241832.1;Parent=gene-L2557_RS15745;Dbxref=GenBank:WP_159241832.1;Name=WP_159241832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250135.1;locus_tag=L2557_RS15745;product=EscU/YscU/HrcU family type III secretion system export apparatus switch protein;protein_id=WP_159241832.1;transl_table=11 NZ_JAIKUA010000275.1 RefSeq gene 1122 1895 . - . ID=gene-L2557_RS15750;Name=sctT;gbkey=Gene;gene=sctT;gene_biotype=protein_coding;locus_tag=L2557_RS15750 NZ_JAIKUA010000275.1 Protein Homology CDS 1122 1895 . - 0 ID=cds-WP_075673509.1;Parent=gene-L2557_RS15750;Dbxref=GenBank:WP_075673509.1;Name=WP_075673509.1;Ontology_term=GO:0030254,GO:0016020;gbkey=CDS;gene=sctT;go_component=membrane|0016020||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827362.1;locus_tag=L2557_RS15750;product=type III secretion system export apparatus subunit SctT;protein_id=WP_075673509.1;transl_table=11 NZ_JAIKUA010000275.1 RefSeq gene 1901 2158 . - . ID=gene-L2557_RS15755;Name=L2557_RS15755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15755 NZ_JAIKUA010000275.1 Protein Homology CDS 1901 2158 . - 0 ID=cds-WP_075673510.1;Parent=gene-L2557_RS15755;Dbxref=GenBank:WP_075673510.1;Name=WP_075673510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311751.1;locus_tag=L2557_RS15755;product=EscS/YscS/HrcS family type III secretion system export apparatus protein;protein_id=WP_075673510.1;transl_table=11 NZ_JAIKUA010000275.1 RefSeq gene 2158 2817 . - . ID=gene-L2557_RS15760;Name=L2557_RS15760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15760 NZ_JAIKUA010000275.1 Protein Homology CDS 2158 2817 . - 0 ID=cds-WP_075673511.1;Parent=gene-L2557_RS15760;Dbxref=GenBank:WP_075673511.1;Name=WP_075673511.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245833.1;locus_tag=L2557_RS15760;product=EscR/YscR/HrcR family type III secretion system export apparatus protein;protein_id=WP_075673511.1;transl_table=11 NZ_JAIKUA010000275.1 RefSeq gene 2823 3671 . - . ID=gene-L2557_RS15765;Name=L2557_RS15765;end_range=3671,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15765;partial=true NZ_JAIKUA010000275.1 Protein Homology CDS 2823 3671 . - 0 ID=cds-WP_235410182.1;Parent=gene-L2557_RS15765;Dbxref=GenBank:WP_235410182.1;Name=WP_235410182.1;end_range=3671,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013236.6;locus_tag=L2557_RS15765;partial=true;product=FliM/FliN family flagellar motor switch protein;protein_id=WP_235410182.1;transl_table=11 ##sequence-region NZ_JAIKUA010000276.1 1 6904 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000276.1 RefSeq region 1 6904 . + . ID=NZ_JAIKUA010000276.1:1..6904;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000276.1 RefSeq gene 1 639 . - . ID=gene-L2557_RS15770;Name=L2557_RS15770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15770;partial=true;start_range=.,1 NZ_JAIKUA010000276.1 Protein Homology CDS 1 639 . - 0 ID=cds-WP_235410183.1;Parent=gene-L2557_RS15770;Dbxref=GenBank:WP_235410183.1;Name=WP_235410183.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025622.6;locus_tag=L2557_RS15770;partial=true;product=glucosyltransferase domain-containing protein;protein_id=WP_235410183.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000276.1 RefSeq gene 641 1558 . - . ID=gene-L2557_RS15775;Name=L2557_RS15775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15775 NZ_JAIKUA010000276.1 Protein Homology CDS 641 1558 . - 0 ID=cds-WP_235410184.1;Parent=gene-L2557_RS15775;Dbxref=GenBank:WP_235410184.1;Name=WP_235410184.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000703659.1;locus_tag=L2557_RS15775;product=glycosyltransferase family 2 protein;protein_id=WP_235410184.1;transl_table=11 NZ_JAIKUA010000276.1 RefSeq gene 1558 1920 . - . ID=gene-L2557_RS15780;Name=L2557_RS15780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15780 NZ_JAIKUA010000276.1 Protein Homology CDS 1558 1920 . - 0 ID=cds-WP_235365863.1;Parent=gene-L2557_RS15780;Dbxref=GenBank:WP_235365863.1;Name=WP_235365863.1;Ontology_term=GO:0000271,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_process=polysaccharide biosynthetic process|0000271||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243328.1;locus_tag=L2557_RS15780;product=GtrA family protein;protein_id=WP_235365863.1;transl_table=11 NZ_JAIKUA010000276.1 RefSeq gene 2119 2487 . + . ID=gene-L2557_RS15785;Name=L2557_RS15785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15785 NZ_JAIKUA010000276.1 Protein Homology CDS 2119 2487 . + 0 ID=cds-WP_235410185.1;Parent=gene-L2557_RS15785;Dbxref=GenBank:WP_235410185.1;Name=WP_235410185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250891.1;locus_tag=L2557_RS15785;product=putative holin;protein_id=WP_235410185.1;transl_table=11 NZ_JAIKUA010000276.1 RefSeq gene 2484 2756 . + . ID=gene-L2557_RS15790;Name=L2557_RS15790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15790 NZ_JAIKUA010000276.1 Protein Homology CDS 2484 2756 . + 0 ID=cds-WP_235410186.1;Parent=gene-L2557_RS15790;Dbxref=GenBank:WP_235410186.1;Name=WP_235410186.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243326.1;locus_tag=L2557_RS15790;product=phage holin family protein;protein_id=WP_235410186.1;transl_table=11 NZ_JAIKUA010000276.1 RefSeq gene 2759 3103 . + . ID=gene-L2557_RS15795;Name=L2557_RS15795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15795 NZ_JAIKUA010000276.1 Protein Homology CDS 2759 3103 . + 0 ID=cds-WP_020945794.1;Parent=gene-L2557_RS15795;Dbxref=GenBank:WP_020945794.1;Name=WP_020945794.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007710822.1;locus_tag=L2557_RS15795;product=M15 family metallopeptidase;protein_id=WP_020945794.1;transl_table=11 NZ_JAIKUA010000276.1 RefSeq gene 3133 3597 . + . ID=gene-L2557_RS15800;Name=L2557_RS15800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15800 NZ_JAIKUA010000276.1 Protein Homology CDS 3133 3597 . + 0 ID=cds-WP_235410187.1;Parent=gene-L2557_RS15800;Dbxref=GenBank:WP_235410187.1;Name=WP_235410187.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243321.1;locus_tag=L2557_RS15800;product=hypothetical protein;protein_id=WP_235410187.1;transl_table=11 NZ_JAIKUA010000276.1 RefSeq gene 3876 4469 . - . ID=gene-L2557_RS15805;Name=L2557_RS15805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15805 NZ_JAIKUA010000276.1 GeneMarkS-2+ CDS 3876 4469 . - 0 ID=cds-WP_099660552.1;Parent=gene-L2557_RS15805;Dbxref=GenBank:WP_099660552.1;Name=WP_099660552.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS15805;product=hypothetical protein;protein_id=WP_099660552.1;transl_table=11 NZ_JAIKUA010000276.1 RefSeq gene 4616 5395 . + . ID=gene-L2557_RS15810;Name=L2557_RS15810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15810 NZ_JAIKUA010000276.1 Protein Homology CDS 4616 5395 . + 0 ID=cds-WP_235410188.1;Parent=gene-L2557_RS15810;Dbxref=GenBank:WP_235410188.1;Name=WP_235410188.1;Ontology_term=GO:0000166,GO:0016779,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleotidyltransferase activity|0016779||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248264.1;locus_tag=L2557_RS15810;product=nucleotidyltransferase domain-containing protein;protein_id=WP_235410188.1;transl_table=11 NZ_JAIKUA010000276.1 RefSeq gene 5379 6431 . + . ID=gene-L2557_RS15815;Name=L2557_RS15815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15815 NZ_JAIKUA010000276.1 Protein Homology CDS 5379 6431 . + 0 ID=cds-WP_159364069.1;Parent=gene-L2557_RS15815;Dbxref=GenBank:WP_159364069.1;Name=WP_159364069.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250906.1;locus_tag=L2557_RS15815;product=DNA polymerase beta superfamily protein;protein_id=WP_159364069.1;transl_table=11 NZ_JAIKUA010000276.1 RefSeq gene 6560 6793 . - . ID=gene-L2557_RS15820;Name=sra;gbkey=Gene;gene=sra;gene_biotype=protein_coding;locus_tag=L2557_RS15820 NZ_JAIKUA010000276.1 Protein Homology CDS 6560 6793 . - 0 ID=cds-WP_075674263.1;Parent=gene-L2557_RS15820;Dbxref=GenBank:WP_075674263.1;Name=WP_075674263.1;gbkey=CDS;gene=sra;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533006.1;locus_tag=L2557_RS15820;product=stationary-phase-induced ribosome-associated protein;protein_id=WP_075674263.1;transl_table=11 ##sequence-region NZ_JAIKUA010000277.1 1 6413 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000277.1 RefSeq region 1 6413 . + . ID=NZ_JAIKUA010000277.1:1..6413;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000277.1 RefSeq gene 1 70 . + . ID=gene-L2557_RS15825;Name=L2557_RS15825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15825;partial=true;start_range=.,1 NZ_JAIKUA010000277.1 Protein Homology CDS 1 70 . + 1 ID=cds-WP_268830901.1;Parent=gene-L2557_RS15825;Dbxref=GenBank:WP_268830901.1;Name=WP_268830901.1;Ontology_term=GO:0071973,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461698.1;locus_tag=L2557_RS15825;partial=true;product=flagellin;protein_id=WP_268830901.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000277.1 RefSeq gene 513 1235 . + . ID=gene-L2557_RS15830;Name=L2557_RS15830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15830 NZ_JAIKUA010000277.1 Protein Homology CDS 513 1235 . + 0 ID=cds-WP_036912728.1;Parent=gene-L2557_RS15830;Dbxref=GenBank:WP_036912728.1;Name=WP_036912728.1;Ontology_term=GO:0006352,GO:0006355,GO:0003677,GO:0003899,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011146217.1;locus_tag=L2557_RS15830;product=RNA polymerase sigma factor FliA;protein_id=WP_036912728.1;transl_table=11 NZ_JAIKUA010000277.1 RefSeq gene 1294 1824 . + . ID=gene-L2557_RS15835;Name=fliZ;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=L2557_RS15835 NZ_JAIKUA010000277.1 Protein Homology CDS 1294 1824 . + 0 ID=cds-WP_075673009.1;Parent=gene-L2557_RS15835;Dbxref=GenBank:WP_075673009.1;Name=WP_075673009.1;gbkey=CDS;gene=fliZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243493.1;locus_tag=L2557_RS15835;product=flagella biosynthesis regulatory protein FliZ;protein_id=WP_075673009.1;transl_table=11 NZ_JAIKUA010000277.1 RefSeq gene 2268 6236 . - . ID=gene-L2557_RS15840;Name=putA;gbkey=Gene;gene=putA;gene_biotype=protein_coding;locus_tag=L2557_RS15840 NZ_JAIKUA010000277.1 Protein Homology CDS 2268 6236 . - 0 ID=cds-WP_099660611.1;Parent=gene-L2557_RS15840;Dbxref=GenBank:WP_099660611.1;Name=WP_099660611.1;Ontology_term=GO:0006355,GO:0055129,GO:0003700,GO:0003842,GO:0004657,GO:0016620;gbkey=CDS;gene=putA;go_function=DNA-binding transcription factor activity|0003700||IEA,L-glutamate gamma-semialdehyde dehydrogenase activity|0003842||IEA,proline dehydrogenase activity|0004657||IEA,oxidoreductase activity%2C acting on the aldehyde or oxo group of donors%2C NAD or NADP as acceptor|0016620||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,L-proline biosynthetic process|0055129||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368050.1;locus_tag=L2557_RS15840;product=trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase;protein_id=WP_099660611.1;transl_table=11 ##sequence-region NZ_JAIKUA010000278.1 1 6110 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000278.1 RefSeq region 1 6110 . + . ID=NZ_JAIKUA010000278.1:1..6110;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000278.1 RefSeq gene 378 1076 . - . ID=gene-L2557_RS15845;Name=L2557_RS15845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15845 NZ_JAIKUA010000278.1 Protein Homology CDS 378 1076 . - 0 ID=cds-WP_088495205.1;Parent=gene-L2557_RS15845;Dbxref=GenBank:WP_088495205.1;Name=WP_088495205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210891.1;locus_tag=L2557_RS15845;product=MgtC family protein;protein_id=WP_088495205.1;transl_table=11 NZ_JAIKUA010000278.1 RefSeq gene 1480 1674 . - . ID=gene-L2557_RS15850;Name=dsrB;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=L2557_RS15850 NZ_JAIKUA010000278.1 Protein Homology CDS 1480 1674 . - 0 ID=cds-WP_075673852.1;Parent=gene-L2557_RS15850;Dbxref=GenBank:WP_075673852.1;Name=WP_075673852.1;gbkey=CDS;gene=dsrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243572.1;locus_tag=L2557_RS15850;product=protein DsrB;protein_id=WP_075673852.1;transl_table=11 NZ_JAIKUA010000278.1 RefSeq gene 1785 1997 . - . ID=gene-L2557_RS15855;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=L2557_RS15855 NZ_JAIKUA010000278.1 Protein Homology CDS 1785 1997 . - 0 ID=cds-WP_004243573.1;Parent=gene-L2557_RS15855;Dbxref=GenBank:WP_004243573.1;Name=WP_004243573.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004935122.1;locus_tag=L2557_RS15855;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_004243573.1;transl_table=11 NZ_JAIKUA010000278.1 RefSeq gene 2453 2959 . + . ID=gene-L2557_RS15860;Name=L2557_RS15860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15860 NZ_JAIKUA010000278.1 Protein Homology CDS 2453 2959 . + 0 ID=cds-WP_075673851.1;Parent=gene-L2557_RS15860;Dbxref=GenBank:WP_075673851.1;Name=WP_075673851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533212.1;locus_tag=L2557_RS15860;product=YlaC family protein;protein_id=WP_075673851.1;transl_table=11 NZ_JAIKUA010000278.1 RefSeq gene 3115 3190 . + . ID=gene-L2557_RS15865;Name=L2557_RS15865;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS15865 NZ_JAIKUA010000278.1 tRNAscan-SE tRNA 3115 3190 . + . ID=rna-L2557_RS15865;Parent=gene-L2557_RS15865;anticodon=(pos:3148..3150);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS15865;product=tRNA-Asn NZ_JAIKUA010000278.1 tRNAscan-SE exon 3115 3190 . + . ID=exon-L2557_RS15865-1;Parent=rna-L2557_RS15865;anticodon=(pos:3148..3150);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS15865;product=tRNA-Asn NZ_JAIKUA010000278.1 RefSeq gene 3333 3926 . - . ID=gene-L2557_RS15870;Name=L2557_RS15870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15870 NZ_JAIKUA010000278.1 Protein Homology CDS 3333 3926 . - 0 ID=cds-WP_075673850.1;Parent=gene-L2557_RS15870;Dbxref=GenBank:WP_075673850.1;Name=WP_075673850.1;Ontology_term=GO:0008753,GO:0009055,GO:0010181,GO:0050136;gbkey=CDS;go_function=NADPH dehydrogenase (quinone) activity|0008753||IEA,electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004236893.1;locus_tag=L2557_RS15870;product=NAD(P)H-dependent oxidoreductase;protein_id=WP_075673850.1;transl_table=11 NZ_JAIKUA010000278.1 RefSeq gene 4017 4958 . - . ID=gene-L2557_RS15875;Name=L2557_RS15875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15875 NZ_JAIKUA010000278.1 Protein Homology CDS 4017 4958 . - 0 ID=cds-WP_099660627.1;Parent=gene-L2557_RS15875;Dbxref=GenBank:WP_099660627.1;Name=WP_099660627.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004241465.1;locus_tag=L2557_RS15875;product=AraC family transcriptional regulator;protein_id=WP_099660627.1;transl_table=11 NZ_JAIKUA010000278.1 RefSeq gene 5256 5331 . + . ID=gene-L2557_RS15880;Name=L2557_RS15880;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS15880 NZ_JAIKUA010000278.1 tRNAscan-SE tRNA 5256 5331 . + . ID=rna-L2557_RS15880;Parent=gene-L2557_RS15880;anticodon=(pos:5289..5291);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS15880;product=tRNA-Asn NZ_JAIKUA010000278.1 tRNAscan-SE exon 5256 5331 . + . ID=exon-L2557_RS15880-1;Parent=rna-L2557_RS15880;anticodon=(pos:5289..5291);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS15880;product=tRNA-Asn NZ_JAIKUA010000278.1 RefSeq gene 5685 5760 . + . ID=gene-L2557_RS15885;Name=L2557_RS15885;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS15885 NZ_JAIKUA010000278.1 tRNAscan-SE tRNA 5685 5760 . + . ID=rna-L2557_RS15885;Parent=gene-L2557_RS15885;anticodon=(pos:5718..5720);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS15885;product=tRNA-Asn NZ_JAIKUA010000278.1 tRNAscan-SE exon 5685 5760 . + . ID=exon-L2557_RS15885-1;Parent=rna-L2557_RS15885;anticodon=(pos:5718..5720);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS15885;product=tRNA-Asn ##sequence-region NZ_JAIKUA010000279.1 1 461 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000279.1 RefSeq region 1 461 . + . ID=NZ_JAIKUA010000279.1:1..461;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000279.1 RefSeq pseudogene 1 461 . + . ID=gene-L2557_RS15890;Name=L2557_RS15890;end_range=461,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS15890;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000279.1 GeneMarkS-2+ CDS 1 461 . + 1 ID=cds-L2557_RS15890;Parent=gene-L2557_RS15890;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=461,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS15890;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000028.1 1 18207 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000028.1 RefSeq region 1 18207 . + . ID=NZ_JAIKUA010000028.1:1..18207;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000028.1 RefSeq gene 340 837 . - . ID=gene-L2557_RS02935;Name=L2557_RS02935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02935 NZ_JAIKUA010000028.1 Protein Homology CDS 340 837 . - 0 ID=cds-WP_099659788.1;Parent=gene-L2557_RS02935;Dbxref=GenBank:WP_099659788.1;Name=WP_099659788.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244520.1;locus_tag=L2557_RS02935;product=YbaK/prolyl-tRNA synthetase associated domain-containing protein;protein_id=WP_099659788.1;transl_table=11 NZ_JAIKUA010000028.1 RefSeq gene 1151 2302 . + . ID=gene-L2557_RS02940;Name=yiaY;gbkey=Gene;gene=yiaY;gene_biotype=protein_coding;locus_tag=L2557_RS02940 NZ_JAIKUA010000028.1 Protein Homology CDS 1151 2302 . + 0 ID=cds-WP_075672525.1;Parent=gene-L2557_RS02940;Dbxref=GenBank:WP_075672525.1;Name=WP_075672525.1;Ontology_term=GO:0016491;gbkey=CDS;gene=yiaY;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628450.1;locus_tag=L2557_RS02940;product=L-threonine dehydrogenase;protein_id=WP_075672525.1;transl_table=11 NZ_JAIKUA010000028.1 RefSeq gene 2450 3067 . - . ID=gene-L2557_RS02945;Name=hisIE;gbkey=Gene;gene=hisIE;gene_biotype=protein_coding;locus_tag=L2557_RS02945 NZ_JAIKUA010000028.1 Protein Homology CDS 2450 3067 . - 0 ID=cds-WP_075672523.1;Parent=gene-L2557_RS02945;Dbxref=GenBank:WP_075672523.1;Name=WP_075672523.1;Ontology_term=GO:0000105,GO:0004635,GO:0004636;gbkey=CDS;gene=hisIE;go_function=phosphoribosyl-AMP cyclohydrolase activity|0004635||IEA,phosphoribosyl-ATP diphosphatase activity|0004636||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252088.1;locus_tag=L2557_RS02945;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE;protein_id=WP_075672523.1;transl_table=11 NZ_JAIKUA010000028.1 RefSeq gene 3067 3840 . - . ID=gene-L2557_RS02950;Name=hisF;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=L2557_RS02950 NZ_JAIKUA010000028.1 Protein Homology CDS 3067 3840 . - 0 ID=cds-WP_075672521.1;Parent=gene-L2557_RS02950;Dbxref=GenBank:WP_075672521.1;Name=WP_075672521.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisF;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537505.1;locus_tag=L2557_RS02950;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=WP_075672521.1;transl_table=11 NZ_JAIKUA010000028.1 RefSeq gene 3822 4559 . - . ID=gene-L2557_RS02955;Name=hisA;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=L2557_RS02955 NZ_JAIKUA010000028.1 Protein Homology CDS 3822 4559 . - 0 ID=cds-WP_099659786.1;Parent=gene-L2557_RS02955;Dbxref=GenBank:WP_099659786.1;Name=WP_099659786.1;Ontology_term=GO:0000105,GO:0003949;gbkey=CDS;gene=hisA;go_function=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity|0003949||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252086.1;locus_tag=L2557_RS02955;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;protein_id=WP_099659786.1;transl_table=11 NZ_JAIKUA010000028.1 RefSeq gene 4566 5156 . - . ID=gene-L2557_RS02960;Name=hisH;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=L2557_RS02960 NZ_JAIKUA010000028.1 Protein Homology CDS 4566 5156 . - 0 ID=cds-WP_075672517.1;Parent=gene-L2557_RS02960;Dbxref=GenBank:WP_075672517.1;Name=WP_075672517.1;Ontology_term=GO:0000105,GO:0000107;gbkey=CDS;gene=hisH;go_function=imidazoleglycerol-phosphate synthase activity|0000107||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244525.1;locus_tag=L2557_RS02960;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=WP_075672517.1;transl_table=11 NZ_JAIKUA010000028.1 RefSeq gene 5156 6223 . - . ID=gene-L2557_RS02965;Name=hisB;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=L2557_RS02965 NZ_JAIKUA010000028.1 Protein Homology CDS 5156 6223 . - 0 ID=cds-WP_075672515.1;Parent=gene-L2557_RS02965;Dbxref=GenBank:WP_075672515.1;Name=WP_075672515.1;Ontology_term=GO:0000105,GO:0004401,GO:0004424;gbkey=CDS;gene=hisB;go_function=histidinol-phosphatase activity|0004401||IEA,imidazoleglycerol-phosphate dehydratase activity|0004424||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_707917.2;locus_tag=L2557_RS02965;product=bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB;protein_id=WP_075672515.1;transl_table=11 NZ_JAIKUA010000028.1 RefSeq gene 6270 7352 . - . ID=gene-L2557_RS02970;Name=hisC;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=L2557_RS02970 NZ_JAIKUA010000028.1 Protein Homology CDS 6270 7352 . - 0 ID=cds-WP_099659784.1;Parent=gene-L2557_RS02970;Dbxref=GenBank:WP_099659784.1;Name=WP_099659784.1;Ontology_term=GO:0000105,GO:0004400;gbkey=CDS;gene=hisC;go_function=histidinol-phosphate transaminase activity|0004400||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367691.1;locus_tag=L2557_RS02970;product=histidinol-phosphate transaminase;protein_id=WP_099659784.1;transl_table=11 NZ_JAIKUA010000028.1 RefSeq gene 7342 8670 . - . ID=gene-L2557_RS02975;Name=hisD;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=L2557_RS02975 NZ_JAIKUA010000028.1 Protein Homology CDS 7342 8670 . - 0 ID=cds-WP_075672511.1;Parent=gene-L2557_RS02975;Dbxref=GenBank:WP_075672511.1;Name=WP_075672511.1;Ontology_term=GO:0000105,GO:0004399,GO:0046872,GO:0051287;gbkey=CDS;gene=hisD;go_function=histidinol dehydrogenase activity|0004399||IEA,metal ion binding|0046872||IEA,NAD binding|0051287||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537500.1;locus_tag=L2557_RS02975;product=histidinol dehydrogenase;protein_id=WP_075672511.1;transl_table=11 NZ_JAIKUA010000028.1 RefSeq gene 8677 9576 . - . ID=gene-L2557_RS02980;Name=hisG;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=L2557_RS02980 NZ_JAIKUA010000028.1 Protein Homology CDS 8677 9576 . - 0 ID=cds-WP_075672509.1;Parent=gene-L2557_RS02980;Dbxref=GenBank:WP_075672509.1;Name=WP_075672509.1;Ontology_term=GO:0000105,GO:0003879,GO:0005737;gbkey=CDS;gene=hisG;go_component=cytoplasm|0005737||IEA;go_function=ATP phosphoribosyltransferase activity|0003879||IEA;go_process=L-histidine biosynthetic process|0000105||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005128078.1;locus_tag=L2557_RS02980;product=ATP phosphoribosyltransferase;protein_id=WP_075672509.1;transl_table=11 NZ_JAIKUA010000028.1 cmsearch sequence_feature 9620 9749 . - . ID=id-NZ_JAIKUA010000028.1:9620..9749;Dbxref=RFAM:RF00514;Note=His leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JAIKUA010000028.1 RefSeq gene 10107 10928 . + . ID=gene-L2557_RS02985;Name=L2557_RS02985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02985 NZ_JAIKUA010000028.1 Protein Homology CDS 10107 10928 . + 0 ID=cds-WP_075672507.1;Parent=gene-L2557_RS02985;Dbxref=GenBank:WP_075672507.1;Name=WP_075672507.1;Ontology_term=GO:0016491,GO:0051287;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247604.1;locus_tag=L2557_RS02985;product=SDR family oxidoreductase;protein_id=WP_075672507.1;transl_table=11 NZ_JAIKUA010000028.1 RefSeq gene 10930 11550 . - . ID=gene-L2557_RS02990;Name=L2557_RS02990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02990 NZ_JAIKUA010000028.1 Protein Homology CDS 10930 11550 . - 0 ID=cds-WP_075672505.1;Parent=gene-L2557_RS02990;Dbxref=GenBank:WP_075672505.1;Name=WP_075672505.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244532.1;locus_tag=L2557_RS02990;product=glutathione S-transferase family protein;protein_id=WP_075672505.1;transl_table=11 NZ_JAIKUA010000028.1 RefSeq gene 11708 12910 . + . ID=gene-L2557_RS02995;Name=L2557_RS02995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS02995 NZ_JAIKUA010000028.1 Protein Homology CDS 11708 12910 . + 0 ID=cds-WP_075672503.1;Parent=gene-L2557_RS02995;Dbxref=GenBank:WP_075672503.1;Name=WP_075672503.1;Ontology_term=GO:0030655,GO:0008800;gbkey=CDS;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244534.1;locus_tag=L2557_RS02995;product=serine hydrolase;protein_id=WP_075672503.1;transl_table=11 NZ_JAIKUA010000028.1 RefSeq gene 13060 14730 . - . ID=gene-L2557_RS03000;Name=L2557_RS03000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03000 NZ_JAIKUA010000028.1 Protein Homology CDS 13060 14730 . - 0 ID=cds-WP_099659783.1;Parent=gene-L2557_RS03000;Dbxref=GenBank:WP_099659783.1;Name=WP_099659783.1;Ontology_term=GO:0004329,GO:0005524;gbkey=CDS;go_function=formate-tetrahydrofolate ligase activity|0004329||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628447.1;locus_tag=L2557_RS03000;product=formate--tetrahydrofolate ligase;protein_id=WP_099659783.1;transl_table=11 NZ_JAIKUA010000028.1 RefSeq gene 15091 16455 . - . ID=gene-L2557_RS03005;Name=L2557_RS03005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03005 NZ_JAIKUA010000028.1 Protein Homology CDS 15091 16455 . - 0 ID=cds-WP_075672499.1;Parent=gene-L2557_RS03005;Dbxref=GenBank:WP_075672499.1;Name=WP_075672499.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252061.1;locus_tag=L2557_RS03005;product=L-serine ammonia-lyase;protein_id=WP_075672499.1;transl_table=11 NZ_JAIKUA010000028.1 RefSeq gene 16580 17896 . - . ID=gene-L2557_RS03010;Name=L2557_RS03010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03010 NZ_JAIKUA010000028.1 Protein Homology CDS 16580 17896 . - 0 ID=cds-WP_235409781.1;Parent=gene-L2557_RS03010;Dbxref=GenBank:WP_235409781.1;Name=WP_235409781.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537486.1;locus_tag=L2557_RS03010;product=HAAAP family serine/threonine permease;protein_id=WP_235409781.1;transl_table=11 ##sequence-region NZ_JAIKUA010000280.1 1 9361 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000280.1 RefSeq region 1 9361 . + . ID=NZ_JAIKUA010000280.1:1..9361;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000280.1 RefSeq gene 356 5290 . - . ID=gene-L2557_RS15895;Name=L2557_RS15895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15895 NZ_JAIKUA010000280.1 Protein Homology CDS 356 5290 . - 0 ID=cds-WP_235410190.1;Parent=gene-L2557_RS15895;Dbxref=GenBank:WP_235410190.1;Name=WP_235410190.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245786.1;locus_tag=L2557_RS15895;product=DNA repair ATPase;protein_id=WP_235410190.1;transl_table=11 NZ_JAIKUA010000280.1 RefSeq gene 5381 7576 . - . ID=gene-L2557_RS15900;Name=L2557_RS15900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15900 NZ_JAIKUA010000280.1 Protein Homology CDS 5381 7576 . - 0 ID=cds-WP_099659727.1;Parent=gene-L2557_RS15900;Dbxref=GenBank:WP_099659727.1;Name=WP_099659727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245785.1;locus_tag=L2557_RS15900;product=flotillin family protein;protein_id=WP_099659727.1;transl_table=11 NZ_JAIKUA010000280.1 RefSeq gene 7663 8298 . - . ID=gene-L2557_RS15905;Name=L2557_RS15905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15905 NZ_JAIKUA010000280.1 Protein Homology CDS 7663 8298 . - 0 ID=cds-WP_156734149.1;Parent=gene-L2557_RS15905;Dbxref=GenBank:WP_156734149.1;Name=WP_156734149.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368448.1;locus_tag=L2557_RS15905;product=OB-fold-containig protein;protein_id=WP_156734149.1;transl_table=11 NZ_JAIKUA010000280.1 RefSeq gene 8601 9020 . - . ID=gene-L2557_RS15910;Name=L2557_RS15910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15910 NZ_JAIKUA010000280.1 Protein Homology CDS 8601 9020 . - 0 ID=cds-WP_223673973.1;Parent=gene-L2557_RS15910;Dbxref=GenBank:WP_223673973.1;Name=WP_223673973.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014566.6;locus_tag=L2557_RS15910;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_223673973.1;transl_table=11 NZ_JAIKUA010000280.1 RefSeq gene 8993 9247 . - . ID=gene-L2557_RS15915;Name=L2557_RS15915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15915 NZ_JAIKUA010000280.1 GeneMarkS-2+ CDS 8993 9247 . - 0 ID=cds-WP_223673974.1;Parent=gene-L2557_RS15915;Dbxref=GenBank:WP_223673974.1;Name=WP_223673974.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS15915;product=hypothetical protein;protein_id=WP_223673974.1;transl_table=11 ##sequence-region NZ_JAIKUA010000281.1 1 350 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000281.1 RefSeq region 1 350 . + . ID=NZ_JAIKUA010000281.1:1..350;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000281.1 RefSeq gene 1 72 . - . ID=gene-L2557_RS15920;Name=L2557_RS15920;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS15920 NZ_JAIKUA010000281.1 tRNAscan-SE tRNA 1 72 . - . ID=rna-L2557_RS15920;Parent=gene-L2557_RS15920;anticodon=(pos:complement(37..39));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS15920;product=tRNA-Ala NZ_JAIKUA010000281.1 tRNAscan-SE exon 1 72 . - . ID=exon-L2557_RS15920-1;Parent=rna-L2557_RS15920;anticodon=(pos:complement(37..39));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS15920;product=tRNA-Ala NZ_JAIKUA010000281.1 RefSeq gene 231 307 . - . ID=gene-L2557_RS15925;Name=L2557_RS15925;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS15925 NZ_JAIKUA010000281.1 tRNAscan-SE tRNA 231 307 . - . ID=rna-L2557_RS15925;Parent=gene-L2557_RS15925;anticodon=(pos:complement(271..273));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS15925;product=tRNA-Ile NZ_JAIKUA010000281.1 tRNAscan-SE exon 231 307 . - . ID=exon-L2557_RS15925-1;Parent=rna-L2557_RS15925;anticodon=(pos:complement(271..273));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS15925;product=tRNA-Ile ##sequence-region NZ_JAIKUA010000282.1 1 3228 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000282.1 RefSeq region 1 3228 . + . ID=NZ_JAIKUA010000282.1:1..3228;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000282.1 RefSeq gene 1 1818 . - . ID=gene-L2557_RS15930;Name=L2557_RS15930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15930;partial=true;start_range=.,1 NZ_JAIKUA010000282.1 Protein Homology CDS 1 1818 . - 0 ID=cds-WP_235410191.1;Parent=gene-L2557_RS15930;Dbxref=GenBank:WP_235410191.1;Name=WP_235410191.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247328.1;locus_tag=L2557_RS15930;partial=true;product=fimbria/pilus outer membrane usher protein;protein_id=WP_235410191.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000282.1 RefSeq gene 1840 2388 . - . ID=gene-L2557_RS15935;Name=L2557_RS15935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15935 NZ_JAIKUA010000282.1 Protein Homology CDS 1840 2388 . - 0 ID=cds-WP_143484144.1;Parent=gene-L2557_RS15935;Dbxref=GenBank:WP_143484144.1;Name=WP_143484144.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_023843516.1;locus_tag=L2557_RS15935;product=fimbrial protein;protein_id=WP_143484144.1;transl_table=11 NZ_JAIKUA010000282.1 RefSeq gene 2483 3022 . - . ID=gene-L2557_RS15940;Name=L2557_RS15940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15940 NZ_JAIKUA010000282.1 Protein Homology CDS 2483 3022 . - 0 ID=cds-WP_075673416.1;Parent=gene-L2557_RS15940;Dbxref=GenBank:WP_075673416.1;Name=WP_075673416.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247325.1;locus_tag=L2557_RS15940;product=fimbrial protein;protein_id=WP_075673416.1;transl_table=11 ##sequence-region NZ_JAIKUA010000283.1 1 7892 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000283.1 RefSeq region 1 7892 . + . ID=NZ_JAIKUA010000283.1:1..7892;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000283.1 RefSeq gene 293 2572 . + . ID=gene-L2557_RS15945;Name=phsA;gbkey=Gene;gene=phsA;gene_biotype=protein_coding;locus_tag=L2557_RS15945 NZ_JAIKUA010000283.1 Protein Homology CDS 293 2572 . + 0 ID=cds-WP_099659386.1;Parent=gene-L2557_RS15945;Dbxref=GenBank:WP_099659386.1;Name=WP_099659386.1;Ontology_term=GO:0016491,GO:0043546,GO:0051539;gbkey=CDS;gene=phsA;go_function=oxidoreductase activity|0016491||IEA,molybdopterin cofactor binding|0043546||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002953910.1;locus_tag=L2557_RS15945;product=thiosulfate reductase PhsA;protein_id=WP_099659386.1;transl_table=11 NZ_JAIKUA010000283.1 RefSeq gene 2587 3165 . + . ID=gene-L2557_RS15950;Name=L2557_RS15950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15950 NZ_JAIKUA010000283.1 Protein Homology CDS 2587 3165 . + 0 ID=cds-WP_023581663.1;Parent=gene-L2557_RS15950;Dbxref=GenBank:WP_023581663.1;Name=WP_023581663.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243779.1;locus_tag=L2557_RS15950;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_023581663.1;transl_table=11 NZ_JAIKUA010000283.1 RefSeq gene 3162 3941 . + . ID=gene-L2557_RS15955;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=protein_coding;locus_tag=L2557_RS15955 NZ_JAIKUA010000283.1 Protein Homology CDS 3162 3941 . + 0 ID=cds-WP_075670540.1;Parent=gene-L2557_RS15955;Dbxref=GenBank:WP_075670540.1;Name=WP_075670540.1;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001092557.1;locus_tag=L2557_RS15955;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_075670540.1;transl_table=11 NZ_JAIKUA010000283.1 RefSeq gene 4212 6353 . + . ID=gene-L2557_RS15960;Name=L2557_RS15960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15960 NZ_JAIKUA010000283.1 Protein Homology CDS 4212 6353 . + 0 ID=cds-WP_235410192.1;Parent=gene-L2557_RS15960;Dbxref=GenBank:WP_235410192.1;Name=WP_235410192.1;Ontology_term=GO:0015343,GO:0038023,GO:0009279;gbkey=CDS;go_component=cell outer membrane|0009279||IEA;go_function=siderophore-iron transmembrane transporter activity|0015343||IEA,signaling receptor activity|0038023||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016536448.1;locus_tag=L2557_RS15960;product=TonB-dependent receptor;protein_id=WP_235410192.1;transl_table=11 NZ_JAIKUA010000283.1 RefSeq gene 6366 7412 . + . ID=gene-L2557_RS15965;Name=L2557_RS15965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15965 NZ_JAIKUA010000283.1 Protein Homology CDS 6366 7412 . + 0 ID=cds-WP_235410193.1;Parent=gene-L2557_RS15965;Dbxref=GenBank:WP_235410193.1;Name=WP_235410193.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013648.6;locus_tag=L2557_RS15965;product=ABC transporter substrate-binding protein;protein_id=WP_235410193.1;transl_table=11 ##sequence-region NZ_JAIKUA010000284.1 1 8510 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000284.1 RefSeq region 1 8510 . + . ID=NZ_JAIKUA010000284.1:1..8510;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000284.1 RefSeq gene 98 463 . + . ID=gene-L2557_RS15970;Name=copM;gbkey=Gene;gene=copM;gene_biotype=protein_coding;locus_tag=L2557_RS15970 NZ_JAIKUA010000284.1 Protein Homology CDS 98 463 . + 0 ID=cds-WP_075674028.1;Parent=gene-L2557_RS15970;Dbxref=GenBank:WP_075674028.1;Name=WP_075674028.1;Ontology_term=GO:0055070,GO:0016530;gbkey=CDS;gene=copM;go_function=metallochaperone activity|0016530||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010846784.1;locus_tag=L2557_RS15970;product=CopM family metallochaperone;protein_id=WP_075674028.1;transl_table=11 NZ_JAIKUA010000284.1 RefSeq gene 630 1541 . + . ID=gene-L2557_RS15975;Name=L2557_RS15975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15975 NZ_JAIKUA010000284.1 Protein Homology CDS 630 1541 . + 0 ID=cds-WP_099660538.1;Parent=gene-L2557_RS15975;Dbxref=GenBank:WP_099660538.1;Name=WP_099660538.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018431.6;locus_tag=L2557_RS15975;product=AraC family transcriptional regulator;protein_id=WP_099660538.1;transl_table=11 NZ_JAIKUA010000284.1 RefSeq gene 1770 2939 . + . ID=gene-L2557_RS15980;Name=L2557_RS15980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15980 NZ_JAIKUA010000284.1 Protein Homology CDS 1770 2939 . + 0 ID=cds-WP_099660539.1;Parent=gene-L2557_RS15980;Dbxref=GenBank:WP_099660539.1;Name=WP_099660539.1;Ontology_term=GO:0018455,GO:0030554,GO:0046872;gbkey=CDS;go_function=alcohol dehydrogenase [NAD(P)+] activity|0018455||IEA,adenyl nucleotide binding|0030554||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF051259.1;locus_tag=L2557_RS15980;product=iron-containing alcohol dehydrogenase;protein_id=WP_099660539.1;transl_table=11 NZ_JAIKUA010000284.1 RefSeq gene 3393 3743 . + . ID=gene-L2557_RS15985;Name=L2557_RS15985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15985 NZ_JAIKUA010000284.1 GeneMarkS-2+ CDS 3393 3743 . + 0 ID=cds-WP_223673590.1;Parent=gene-L2557_RS15985;Dbxref=GenBank:WP_223673590.1;Name=WP_223673590.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS15985;product=glycosyltransferase family 9 protein;protein_id=WP_223673590.1;transl_table=11 NZ_JAIKUA010000284.1 RefSeq gene 3771 4259 . + . ID=gene-L2557_RS15990;Name=L2557_RS15990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS15990 NZ_JAIKUA010000284.1 Protein Homology CDS 3771 4259 . + 0 ID=cds-WP_328253306.1;Parent=gene-L2557_RS15990;Dbxref=GenBank:WP_328253306.1;Name=WP_328253306.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF013257.6;locus_tag=L2557_RS15990;product=glycosyltransferase family 9 protein;protein_id=WP_328253306.1;transl_table=11 NZ_JAIKUA010000284.1 RefSeq pseudogene 4534 4978 . - . ID=gene-L2557_RS15995;Name=tnpA;gbkey=Gene;gene=tnpA;gene_biotype=pseudogene;locus_tag=L2557_RS15995;pseudo=true NZ_JAIKUA010000284.1 Protein Homology CDS 4534 4978 . - 0 ID=cds-L2557_RS15995;Parent=gene-L2557_RS15995;Note=frameshifted%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;gene=tnpA;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148688.1;locus_tag=L2557_RS15995;product=IS200/IS605 family transposase;pseudo=true;transl_table=11 NZ_JAIKUA010000284.1 RefSeq gene 5186 8056 . - . ID=gene-L2557_RS16000;Name=L2557_RS16000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16000 NZ_JAIKUA010000284.1 Protein Homology CDS 5186 8056 . - 0 ID=cds-WP_235410194.1;Parent=gene-L2557_RS16000;Dbxref=GenBank:WP_235410194.1;Name=WP_235410194.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023335.6;locus_tag=L2557_RS16000;product=DUF3427 domain-containing protein;protein_id=WP_235410194.1;transl_table=11 NZ_JAIKUA010000284.1 RefSeq gene 8049 8459 . - . ID=gene-L2557_RS16005;Name=L2557_RS16005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16005 NZ_JAIKUA010000284.1 Protein Homology CDS 8049 8459 . - 0 ID=cds-WP_099660541.1;Parent=gene-L2557_RS16005;Dbxref=GenBank:WP_099660541.1;Name=WP_099660541.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: protein motif:HMM:NF012514.6;locus_tag=L2557_RS16005;product=(deoxy)nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_099660541.1;transl_table=11 ##sequence-region NZ_JAIKUA010000285.1 1 6498 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000285.1 RefSeq region 1 6498 . + . ID=NZ_JAIKUA010000285.1:1..6498;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000285.1 RefSeq gene 203 1336 . + . ID=gene-L2557_RS16010;Name=L2557_RS16010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16010 NZ_JAIKUA010000285.1 Protein Homology CDS 203 1336 . + 0 ID=cds-WP_099660616.1;Parent=gene-L2557_RS16010;Dbxref=GenBank:WP_099660616.1;Name=WP_099660616.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243501.1;locus_tag=L2557_RS16010;product=hypothetical protein;protein_id=WP_099660616.1;transl_table=11 NZ_JAIKUA010000285.1 RefSeq gene 1522 1803 . + . ID=gene-L2557_RS16015;Name=L2557_RS16015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16015 NZ_JAIKUA010000285.1 GeneMarkS-2+ CDS 1522 1803 . + 0 ID=cds-WP_075673016.1;Parent=gene-L2557_RS16015;Dbxref=GenBank:WP_075673016.1;Name=WP_075673016.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS16015;product=hypothetical protein;protein_id=WP_075673016.1;transl_table=11 NZ_JAIKUA010000285.1 RefSeq gene 2069 2533 . + . ID=gene-L2557_RS16020;Name=L2557_RS16020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16020 NZ_JAIKUA010000285.1 Protein Homology CDS 2069 2533 . + 0 ID=cds-WP_099660615.1;Parent=gene-L2557_RS16020;Dbxref=GenBank:WP_099660615.1;Name=WP_099660615.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013203078.1;locus_tag=L2557_RS16020;product=GNAT family N-acetyltransferase;protein_id=WP_099660615.1;transl_table=11 NZ_JAIKUA010000285.1 RefSeq gene 2672 3025 . - . ID=gene-L2557_RS16025;Name=fliT;gbkey=Gene;gene=fliT;gene_biotype=protein_coding;locus_tag=L2557_RS16025 NZ_JAIKUA010000285.1 Protein Homology CDS 2672 3025 . - 0 ID=cds-WP_159241975.1;Parent=gene-L2557_RS16025;Dbxref=GenBank:WP_159241975.1;Name=WP_159241975.1;gbkey=CDS;gene=fliT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533138.1;locus_tag=L2557_RS16025;product=flagellar protein FliT;protein_id=WP_159241975.1;transl_table=11 NZ_JAIKUA010000285.1 RefSeq gene 3044 3442 . - . ID=gene-L2557_RS16030;Name=fliS;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=L2557_RS16030 NZ_JAIKUA010000285.1 Protein Homology CDS 3044 3442 . - 0 ID=cds-WP_023581844.1;Parent=gene-L2557_RS16030;Dbxref=GenBank:WP_023581844.1;Name=WP_023581844.1;Ontology_term=GO:0044780;gbkey=CDS;gene=fliS;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243499.1;locus_tag=L2557_RS16030;product=flagellar export chaperone FliS;protein_id=WP_023581844.1;transl_table=11 NZ_JAIKUA010000285.1 RefSeq gene 3462 4880 . - . ID=gene-L2557_RS16035;Name=fliD;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=L2557_RS16035 NZ_JAIKUA010000285.1 Protein Homology CDS 3462 4880 . - 0 ID=cds-WP_099660614.1;Parent=gene-L2557_RS16035;Dbxref=GenBank:WP_099660614.1;Name=WP_099660614.1;Ontology_term=GO:0007155,GO:0009288,GO:0009421;gbkey=CDS;gene=fliD;go_component=bacterial-type flagellum|0009288||IEA,bacterial-type flagellum filament cap|0009421||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013183977.1;locus_tag=L2557_RS16035;product=flagellar filament capping protein FliD;protein_id=WP_099660614.1;transl_table=11 NZ_JAIKUA010000285.1 RefSeq gene 5268 6368 . + . ID=gene-L2557_RS16040;Name=L2557_RS16040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16040 NZ_JAIKUA010000285.1 Protein Homology CDS 5268 6368 . + 0 ID=cds-WP_099660613.1;Parent=gene-L2557_RS16040;Dbxref=GenBank:WP_099660613.1;Name=WP_099660613.1;Ontology_term=GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243496.1;locus_tag=L2557_RS16040;product=FliC/FljB family flagellin;protein_id=WP_099660613.1;transl_table=11 ##sequence-region NZ_JAIKUA010000286.1 1 6140 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000286.1 RefSeq region 1 6140 . + . ID=NZ_JAIKUA010000286.1:1..6140;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000286.1 RefSeq gene 302 1876 . + . ID=gene-L2557_RS16045;Name=L2557_RS16045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16045 NZ_JAIKUA010000286.1 Protein Homology CDS 302 1876 . + 0 ID=cds-WP_075671051.1;Parent=gene-L2557_RS16045;Dbxref=GenBank:WP_075671051.1;Name=WP_075671051.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912997.1;locus_tag=L2557_RS16045;product=ATP-binding cassette domain-containing protein;protein_id=WP_075671051.1;transl_table=11 NZ_JAIKUA010000286.1 RefSeq gene 1925 2677 . - . ID=gene-L2557_RS16050;Name=cutC;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=L2557_RS16050 NZ_JAIKUA010000286.1 Protein Homology CDS 1925 2677 . - 0 ID=cds-WP_099660349.1;Parent=gene-L2557_RS16050;Dbxref=GenBank:WP_099660349.1;Name=WP_099660349.1;Ontology_term=GO:0055070,GO:0005507;gbkey=CDS;gene=cutC;go_function=copper ion binding|0005507||IEA;go_process=copper ion homeostasis|0055070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211209.1;locus_tag=L2557_RS16050;product=copper homeostasis protein CutC;protein_id=WP_099660349.1;transl_table=11 NZ_JAIKUA010000286.1 RefSeq gene 2832 3386 . - . ID=gene-L2557_RS16055;Name=L2557_RS16055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16055 NZ_JAIKUA010000286.1 Protein Homology CDS 2832 3386 . - 0 ID=cds-WP_156733477.1;Parent=gene-L2557_RS16055;Dbxref=GenBank:WP_156733477.1;Name=WP_156733477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242708.1;locus_tag=L2557_RS16055;product=VOC family protein;protein_id=WP_156733477.1;transl_table=11 NZ_JAIKUA010000286.1 RefSeq gene 3559 5289 . + . ID=gene-L2557_RS16060;Name=argS;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=L2557_RS16060 NZ_JAIKUA010000286.1 Protein Homology CDS 3559 5289 . + 0 ID=cds-WP_223673610.1;Parent=gene-L2557_RS16060;Dbxref=GenBank:WP_223673610.1;Name=WP_223673610.1;Ontology_term=GO:0006420,GO:0004814,GO:0005524,GO:0005737;gbkey=CDS;gene=argS;go_component=cytoplasm|0005737||IEA;go_function=arginine-tRNA ligase activity|0004814||IEA,ATP binding|0005524||IEA;go_process=arginyl-tRNA aminoacylation|0006420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227709.1;locus_tag=L2557_RS16060;product=arginine--tRNA ligase;protein_id=WP_223673610.1;transl_table=11 NZ_JAIKUA010000286.1 RefSeq gene 5430 5702 . - . ID=gene-L2557_RS16065;Name=L2557_RS16065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16065 NZ_JAIKUA010000286.1 Protein Homology CDS 5430 5702 . - 0 ID=cds-WP_235410196.1;Parent=gene-L2557_RS16065;Dbxref=GenBank:WP_235410196.1;Name=WP_235410196.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536582.1;locus_tag=L2557_RS16065;product=hypothetical protein;protein_id=WP_235410196.1;transl_table=11 ##sequence-region NZ_JAIKUA010000287.1 1 1816 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000287.1 RefSeq region 1 1816 . + . ID=NZ_JAIKUA010000287.1:1..1816;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000287.1 RefSeq gene 5 1531 . + . ID=gene-L2557_RS16070;Name=L2557_RS16070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16070 NZ_JAIKUA010000287.1 Protein Homology CDS 5 1531 . + 0 ID=cds-WP_235410197.1;Parent=gene-L2557_RS16070;Dbxref=GenBank:WP_235410197.1;Name=WP_235410197.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014169836.1;locus_tag=L2557_RS16070;product=methyl-accepting chemotaxis protein;protein_id=WP_235410197.1;transl_table=11 ##sequence-region NZ_JAIKUA010000288.1 1 2243 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000288.1 RefSeq region 1 2243 . + . ID=NZ_JAIKUA010000288.1:1..2243;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000288.1 RefSeq gene 1 492 . - . ID=gene-L2557_RS16075;Name=L2557_RS16075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16075;partial=true;start_range=.,1 NZ_JAIKUA010000288.1 Protein Homology CDS 1 492 . - 0 ID=cds-WP_235410198.1;Parent=gene-L2557_RS16075;Dbxref=GenBank:WP_235410198.1;Name=WP_235410198.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247920.1;locus_tag=L2557_RS16075;partial=true;product=AAA family ATPase;protein_id=WP_235410198.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000288.1 RefSeq gene 1071 1268 . + . ID=gene-L2557_RS16080;Name=L2557_RS16080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16080 NZ_JAIKUA010000288.1 Protein Homology CDS 1071 1268 . + 0 ID=cds-WP_036913277.1;Parent=gene-L2557_RS16080;Dbxref=GenBank:WP_036913277.1;Name=WP_036913277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015671441.1;locus_tag=L2557_RS16080;product=ParD-like family protein;protein_id=WP_036913277.1;transl_table=11 NZ_JAIKUA010000288.1 RefSeq gene 1281 2057 . + . ID=gene-L2557_RS16085;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=L2557_RS16085 NZ_JAIKUA010000288.1 Protein Homology CDS 1281 2057 . + 0 ID=cds-WP_075672616.1;Parent=gene-L2557_RS16085;Dbxref=GenBank:WP_075672616.1;Name=WP_075672616.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242544.1;locus_tag=L2557_RS16085;product=type I methionyl aminopeptidase;protein_id=WP_075672616.1;transl_table=11 ##sequence-region NZ_JAIKUA010000289.1 1 5951 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000289.1 RefSeq region 1 5951 . + . ID=NZ_JAIKUA010000289.1:1..5951;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000289.1 RefSeq gene 266 2002 . + . ID=gene-L2557_RS16090;Name=L2557_RS16090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16090 NZ_JAIKUA010000289.1 Protein Homology CDS 266 2002 . + 0 ID=cds-WP_235410199.1;Parent=gene-L2557_RS16090;Dbxref=GenBank:WP_235410199.1;Name=WP_235410199.1;Ontology_term=GO:0019752,GO:0016830,GO:0030170;gbkey=CDS;go_function=carbon-carbon lyase activity|0016830||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249425.1;locus_tag=L2557_RS16090;product=pyridoxal phosphate-dependent decarboxylase family protein;protein_id=WP_235410199.1;transl_table=11 NZ_JAIKUA010000289.1 RefSeq gene 2099 2365 . - . ID=gene-L2557_RS16095;Name=L2557_RS16095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16095 NZ_JAIKUA010000289.1 Protein Homology CDS 2099 2365 . - 0 ID=cds-WP_075672693.1;Parent=gene-L2557_RS16095;Dbxref=GenBank:WP_075672693.1;Name=WP_075672693.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004893274.1;locus_tag=L2557_RS16095;product=DksA/TraR family C4-type zinc finger protein;protein_id=WP_075672693.1;transl_table=11 NZ_JAIKUA010000289.1 RefSeq gene 2525 3685 . - . ID=gene-L2557_RS16100;Name=L2557_RS16100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16100 NZ_JAIKUA010000289.1 Protein Homology CDS 2525 3685 . - 0 ID=cds-WP_099660231.1;Parent=gene-L2557_RS16100;Dbxref=GenBank:WP_099660231.1;Name=WP_099660231.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004866618.1;locus_tag=L2557_RS16100;product=MFS transporter;protein_id=WP_099660231.1;transl_table=11 NZ_JAIKUA010000289.1 RefSeq gene 3713 5014 . - . ID=gene-L2557_RS16105;Name=L2557_RS16105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16105 NZ_JAIKUA010000289.1 Protein Homology CDS 3713 5014 . - 0 ID=cds-WP_235410200.1;Parent=gene-L2557_RS16105;Dbxref=GenBank:WP_235410200.1;Name=WP_235410200.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015585914.1;locus_tag=L2557_RS16105;product=hypothetical protein;protein_id=WP_235410200.1;transl_table=11 NZ_JAIKUA010000289.1 RefSeq gene 5054 5951 . - . ID=gene-L2557_RS16110;Name=L2557_RS16110;end_range=5951,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16110;partial=true NZ_JAIKUA010000289.1 Protein Homology CDS 5054 5951 . - 1 ID=cds-WP_235410201.1;Parent=gene-L2557_RS16110;Dbxref=GenBank:WP_235410201.1;Name=WP_235410201.1;Ontology_term=GO:0005524;end_range=5951,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015585915.1;locus_tag=L2557_RS16110;partial=true;product=ROK family protein;protein_id=WP_235410201.1;transl_table=11 ##sequence-region NZ_JAIKUA010000029.1 1 7532 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000029.1 RefSeq region 1 7532 . + . ID=NZ_JAIKUA010000029.1:1..7532;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000029.1 RefSeq gene 206 2374 . - . ID=gene-L2557_RS03015;Name=fdhF;gbkey=Gene;gene=fdhF;gene_biotype=protein_coding;locus_tag=L2557_RS03015 NZ_JAIKUA010000029.1 Protein Homology CDS 206 2374 . - 0 ID=cds-WP_099659238.1;Parent=gene-L2557_RS03015;Dbxref=GenBank:WP_099659238.1;Name=WP_099659238.1;Ontology_term=GO:0015942,GO:0008863,GO:0009326;gbkey=CDS;gene=fdhF;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246682.1;locus_tag=L2557_RS03015;product=formate dehydrogenase subunit alpha;protein_id=WP_099659238.1;transl_table=11 NZ_JAIKUA010000029.1 RefSeq gene 2990 4306 . + . ID=gene-L2557_RS03020;Name=L2557_RS03020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03020 NZ_JAIKUA010000029.1 Protein Homology CDS 2990 4306 . + 0 ID=cds-WP_099659239.1;Parent=gene-L2557_RS03020;Dbxref=GenBank:WP_099659239.1;Name=WP_099659239.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246681.1;locus_tag=L2557_RS03020;product=sodium-dependent transporter;protein_id=WP_099659239.1;transl_table=11 NZ_JAIKUA010000029.1 RefSeq gene 4417 5787 . - . ID=gene-L2557_RS03025;Name=L2557_RS03025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03025 NZ_JAIKUA010000029.1 Protein Homology CDS 4417 5787 . - 0 ID=cds-WP_075672576.1;Parent=gene-L2557_RS03025;Dbxref=GenBank:WP_075672576.1;Name=WP_075672576.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246680.1;locus_tag=L2557_RS03025;product=class-II fumarase/aspartase family protein;protein_id=WP_075672576.1;transl_table=11 NZ_JAIKUA010000029.1 RefSeq gene 5799 7355 . - . ID=gene-L2557_RS03030;Name=L2557_RS03030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03030 NZ_JAIKUA010000029.1 Protein Homology CDS 5799 7355 . - 0 ID=cds-WP_235409783.1;Parent=gene-L2557_RS03030;Dbxref=GenBank:WP_235409783.1;Name=WP_235409783.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814354.1;locus_tag=L2557_RS03030;product=PTS transporter subunit EIIC;protein_id=WP_235409783.1;transl_table=11 ##sequence-region NZ_JAIKUA010000290.1 1 4170 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000290.1 RefSeq region 1 4170 . + . ID=NZ_JAIKUA010000290.1:1..4170;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000290.1 RefSeq gene 73 1014 . - . ID=gene-L2557_RS16115;Name=fruK;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=L2557_RS16115 NZ_JAIKUA010000290.1 Protein Homology CDS 73 1014 . - 0 ID=cds-WP_075673946.1;Parent=gene-L2557_RS16115;Dbxref=GenBank:WP_075673946.1;Name=WP_075673946.1;Ontology_term=GO:0008662,GO:0016773;gbkey=CDS;gene=fruK;go_function=1-phosphofructokinase activity|0008662||IEA,phosphotransferase activity%2C alcohol group as acceptor|0016773||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248638.1;locus_tag=L2557_RS16115;product=1-phosphofructokinase;protein_id=WP_075673946.1;transl_table=11 NZ_JAIKUA010000290.1 RefSeq gene 1667 1879 . - . ID=gene-L2557_RS16120;Name=ybcJ;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=L2557_RS16120 NZ_JAIKUA010000290.1 Protein Homology CDS 1667 1879 . - 0 ID=cds-WP_075673947.1;Parent=gene-L2557_RS16120;Dbxref=GenBank:WP_075673947.1;Name=WP_075673947.1;gbkey=CDS;gene=ybcJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847198.1;locus_tag=L2557_RS16120;product=ribosome-associated protein YbcJ;protein_id=WP_075673947.1;transl_table=11 NZ_JAIKUA010000290.1 RefSeq gene 1883 2755 . - . ID=gene-L2557_RS16125;Name=folD;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=L2557_RS16125 NZ_JAIKUA010000290.1 Protein Homology CDS 1883 2755 . - 0 ID=cds-WP_075673948.1;Parent=gene-L2557_RS16125;Dbxref=GenBank:WP_075673948.1;Name=WP_075673948.1;Ontology_term=GO:0004488;gbkey=CDS;gene=folD;go_function=methylenetetrahydrofolate dehydrogenase (NADP+) activity|0004488||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827221.1;locus_tag=L2557_RS16125;product=bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD;protein_id=WP_075673948.1;transl_table=11 NZ_JAIKUA010000290.1 RefSeq gene 2946 3022 . + . ID=gene-L2557_RS16130;Name=L2557_RS16130;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS16130 NZ_JAIKUA010000290.1 tRNAscan-SE tRNA 2946 3022 . + . ID=rna-L2557_RS16130;Parent=gene-L2557_RS16130;anticodon=(pos:2980..2982);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS16130;product=tRNA-Arg NZ_JAIKUA010000290.1 tRNAscan-SE exon 2946 3022 . + . ID=exon-L2557_RS16130-1;Parent=rna-L2557_RS16130;anticodon=(pos:2980..2982);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS16130;product=tRNA-Arg NZ_JAIKUA010000290.1 RefSeq gene 3099 3287 . - . ID=gene-L2557_RS16135;Name=L2557_RS16135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16135 NZ_JAIKUA010000290.1 Protein Homology CDS 3099 3287 . - 0 ID=cds-WP_156733946.1;Parent=gene-L2557_RS16135;Dbxref=GenBank:WP_156733946.1;Name=WP_156733946.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012987787.1;locus_tag=L2557_RS16135;product=helix-turn-helix transcriptional regulator;protein_id=WP_156733946.1;transl_table=11 NZ_JAIKUA010000290.1 RefSeq gene 3341 3796 . - . ID=gene-L2557_RS16140;Name=L2557_RS16140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16140 NZ_JAIKUA010000290.1 Protein Homology CDS 3341 3796 . - 0 ID=cds-WP_412761650.1;Parent=gene-L2557_RS16140;Dbxref=GenBank:WP_412761650.1;Name=WP_412761650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006820565.1;locus_tag=L2557_RS16140;product=SAM-dependent methyltransferase;protein_id=WP_412761650.1;transl_table=11 NZ_JAIKUA010000290.1 RefSeq gene 3798 4170 . - . ID=gene-L2557_RS16145;Name=L2557_RS16145;end_range=4170,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16145;partial=true NZ_JAIKUA010000290.1 GeneMarkS-2+ CDS 3798 4170 . - 1 ID=cds-WP_235410202.1;Parent=gene-L2557_RS16145;Dbxref=GenBank:WP_235410202.1;Name=WP_235410202.1;end_range=4170,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS16145;partial=true;product=DUF2591 domain-containing protein;protein_id=WP_235410202.1;transl_table=11 ##sequence-region NZ_JAIKUA010000291.1 1 3673 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000291.1 RefSeq region 1 3673 . + . ID=NZ_JAIKUA010000291.1:1..3673;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000291.1 RefSeq gene 202 1626 . - . ID=gene-L2557_RS16150;Name=L2557_RS16150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16150 NZ_JAIKUA010000291.1 Protein Homology CDS 202 1626 . - 0 ID=cds-WP_099659744.1;Parent=gene-L2557_RS16150;Dbxref=GenBank:WP_099659744.1;Name=WP_099659744.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF020904.6;locus_tag=L2557_RS16150;product=SMI1/KNR4 family protein;protein_id=WP_099659744.1;transl_table=11 NZ_JAIKUA010000291.1 RefSeq gene 2012 2173 . - . ID=gene-L2557_RS16155;Name=L2557_RS16155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16155 NZ_JAIKUA010000291.1 Protein Homology CDS 2012 2173 . - 0 ID=cds-WP_164530199.1;Parent=gene-L2557_RS16155;Dbxref=GenBank:WP_164530199.1;Name=WP_164530199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537328.1;locus_tag=L2557_RS16155;product=hypothetical protein;protein_id=WP_164530199.1;transl_table=11 NZ_JAIKUA010000291.1 RefSeq gene 2399 3334 . + . ID=gene-L2557_RS16160;Name=L2557_RS16160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16160 NZ_JAIKUA010000291.1 Protein Homology CDS 2399 3334 . + 0 ID=cds-WP_075673596.1;Parent=gene-L2557_RS16160;Dbxref=GenBank:WP_075673596.1;Name=WP_075673596.1;Ontology_term=GO:0009117,GO:0000166,GO:0000287,GO:0008253;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,magnesium ion binding|0000287||IEA,5'-nucleotidase activity|0008253||IEA;go_process=nucleotide metabolic process|0009117||IEA;inference=COORDINATES: protein motif:HMM:NF017953.6;locus_tag=L2557_RS16160;product=5'-nucleotidase;protein_id=WP_075673596.1;transl_table=11 ##sequence-region NZ_JAIKUA010000292.1 1 7957 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000292.1 RefSeq region 1 7957 . + . ID=NZ_JAIKUA010000292.1:1..7957;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000292.1 RefSeq gene 114 2222 . - . ID=gene-L2557_RS16165;Name=dinG;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=L2557_RS16165 NZ_JAIKUA010000292.1 Protein Homology CDS 114 2222 . - 0 ID=cds-WP_109420142.1;Parent=gene-L2557_RS16165;Dbxref=GenBank:WP_109420142.1;Name=WP_109420142.1;Ontology_term=GO:0006139,GO:0003677,GO:0003678,GO:0005524,GO:0016818;gbkey=CDS;gene=dinG;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides%2C in phosphorus-containing anhydrides|0016818||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010846825.1;locus_tag=L2557_RS16165;product=ATP-dependent DNA helicase DinG;protein_id=WP_109420142.1;transl_table=11 NZ_JAIKUA010000292.1 RefSeq gene 2475 3383 . + . ID=gene-L2557_RS16170;Name=L2557_RS16170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16170 NZ_JAIKUA010000292.1 Protein Homology CDS 2475 3383 . + 0 ID=cds-WP_075672769.1;Parent=gene-L2557_RS16170;Dbxref=GenBank:WP_075672769.1;Name=WP_075672769.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367684.1;locus_tag=L2557_RS16170;product=LysR family transcriptional regulator;protein_id=WP_075672769.1;transl_table=11 NZ_JAIKUA010000292.1 RefSeq gene 3458 4339 . + . ID=gene-L2557_RS16175;Name=L2557_RS16175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16175 NZ_JAIKUA010000292.1 Protein Homology CDS 3458 4339 . + 0 ID=cds-WP_075672768.1;Parent=gene-L2557_RS16175;Dbxref=GenBank:WP_075672768.1;Name=WP_075672768.1;Ontology_term=GO:0071704,GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;go_process=obsolete organic substance metabolic process|0071704||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014917114.1;locus_tag=L2557_RS16175;product=dihydrodipicolinate synthase family protein;protein_id=WP_075672768.1;transl_table=11 NZ_JAIKUA010000292.1 RefSeq gene 4526 4951 . + . ID=gene-L2557_RS16180;Name=fabZ;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=L2557_RS16180 NZ_JAIKUA010000292.1 Protein Homology CDS 4526 4951 . + 0 ID=cds-WP_075672767.1;Parent=gene-L2557_RS16180;Dbxref=GenBank:WP_075672767.1;Name=WP_075672767.1;gbkey=CDS;gene=fabZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537564.1;locus_tag=L2557_RS16180;product=3-hydroxyacyl-ACP dehydratase FabZ;protein_id=WP_075672767.1;transl_table=11 NZ_JAIKUA010000292.1 RefSeq gene 5008 6396 . - . ID=gene-L2557_RS16185;Name=L2557_RS16185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16185 NZ_JAIKUA010000292.1 Protein Homology CDS 5008 6396 . - 0 ID=cds-WP_075672766.1;Parent=gene-L2557_RS16185;Dbxref=GenBank:WP_075672766.1;Name=WP_075672766.1;Ontology_term=GO:0016829;gbkey=CDS;go_function=lyase activity|0016829||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244493.1;locus_tag=L2557_RS16185;product=MmgE/PrpD family protein;protein_id=WP_075672766.1;transl_table=11 NZ_JAIKUA010000292.1 RefSeq gene 6478 7845 . - . ID=gene-L2557_RS16190;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=L2557_RS16190 NZ_JAIKUA010000292.1 Protein Homology CDS 6478 7845 . - 0 ID=cds-WP_075672765.1;Parent=gene-L2557_RS16190;Dbxref=GenBank:WP_075672765.1;Name=WP_075672765.1;Ontology_term=GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004264205.1;locus_tag=L2557_RS16190;product=adenylosuccinate lyase;protein_id=WP_075672765.1;transl_table=11 ##sequence-region NZ_JAIKUA010000293.1 1 5066 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000293.1 RefSeq region 1 5066 . + . ID=NZ_JAIKUA010000293.1:1..5066;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000293.1 RefSeq gene 38 382 . + . ID=gene-L2557_RS16195;Name=L2557_RS16195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16195 NZ_JAIKUA010000293.1 Protein Homology CDS 38 382 . + 0 ID=cds-WP_075672615.1;Parent=gene-L2557_RS16195;Dbxref=GenBank:WP_075672615.1;Name=WP_075672615.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242548.1;locus_tag=L2557_RS16195;product=antiterminator Q family protein;protein_id=WP_075672615.1;transl_table=11 NZ_JAIKUA010000293.1 RefSeq gene 613 1476 . + . ID=gene-L2557_RS16200;Name=L2557_RS16200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16200 NZ_JAIKUA010000293.1 Protein Homology CDS 613 1476 . + 0 ID=cds-WP_099659650.1;Parent=gene-L2557_RS16200;Dbxref=GenBank:WP_099659650.1;Name=WP_099659650.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242549.1;locus_tag=L2557_RS16200;product=lipase family alpha/beta hydrolase;protein_id=WP_099659650.1;transl_table=11 NZ_JAIKUA010000293.1 RefSeq gene 1547 1984 . - . ID=gene-L2557_RS16205;Name=L2557_RS16205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16205 NZ_JAIKUA010000293.1 Protein Homology CDS 1547 1984 . - 0 ID=cds-WP_099659651.1;Parent=gene-L2557_RS16205;Dbxref=GenBank:WP_099659651.1;Name=WP_099659651.1;Ontology_term=GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628180.1;locus_tag=L2557_RS16205;product=type II toxin-antitoxin system HicB family antitoxin;protein_id=WP_099659651.1;transl_table=11 NZ_JAIKUA010000293.1 RefSeq gene 2228 2965 . + . ID=gene-L2557_RS16210;Name=L2557_RS16210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16210 NZ_JAIKUA010000293.1 Protein Homology CDS 2228 2965 . + 0 ID=cds-WP_235410203.1;Parent=gene-L2557_RS16210;Dbxref=GenBank:WP_235410203.1;Name=WP_235410203.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242553.1;locus_tag=L2557_RS16210;product=phosphatase;protein_id=WP_235410203.1;transl_table=11 NZ_JAIKUA010000293.1 RefSeq gene 3040 4638 . - . ID=gene-L2557_RS16215;Name=L2557_RS16215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16215 NZ_JAIKUA010000293.1 Protein Homology CDS 3040 4638 . - 0 ID=cds-WP_235410204.1;Parent=gene-L2557_RS16215;Dbxref=GenBank:WP_235410204.1;Name=WP_235410204.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920760.1;locus_tag=L2557_RS16215;product=methyl-accepting chemotaxis protein;protein_id=WP_235410204.1;transl_table=11 ##sequence-region NZ_JAIKUA010000294.1 1 1600 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000294.1 RefSeq region 1 1600 . + . ID=NZ_JAIKUA010000294.1:1..1600;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000294.1 RefSeq gene 434 973 . + . ID=gene-L2557_RS16220;Name=L2557_RS16220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16220 NZ_JAIKUA010000294.1 Protein Homology CDS 434 973 . + 0 ID=cds-WP_075672134.1;Parent=gene-L2557_RS16220;Dbxref=GenBank:WP_075672134.1;Name=WP_075672134.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243080.1;locus_tag=L2557_RS16220;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_075672134.1;transl_table=11 NZ_JAIKUA010000294.1 RefSeq gene 1176 1600 . + . ID=gene-L2557_RS16225;Name=L2557_RS16225;end_range=1600,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16225;partial=true NZ_JAIKUA010000294.1 Protein Homology CDS 1176 1600 . + 0 ID=cds-WP_235410205.1;Parent=gene-L2557_RS16225;Dbxref=GenBank:WP_235410205.1;Name=WP_235410205.1;Ontology_term=GO:0016747;end_range=1600,.;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004236899.1;locus_tag=L2557_RS16225;partial=true;product=GNAT family N-acetyltransferase;protein_id=WP_235410205.1;transl_table=11 ##sequence-region NZ_JAIKUA010000295.1 1 10564 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000295.1 RefSeq region 1 10564 . + . ID=NZ_JAIKUA010000295.1:1..10564;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000295.1 RefSeq gene 73 1374 . - . ID=gene-L2557_RS16230;Name=uraA;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=L2557_RS16230 NZ_JAIKUA010000295.1 Protein Homology CDS 73 1374 . - 0 ID=cds-WP_075671898.1;Parent=gene-L2557_RS16230;Dbxref=GenBank:WP_075671898.1;Name=WP_075671898.1;Ontology_term=GO:0022857;gbkey=CDS;gene=uraA;go_function=transmembrane transporter activity|0022857||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243429.1;locus_tag=L2557_RS16230;product=uracil permease;protein_id=WP_075671898.1;transl_table=11 NZ_JAIKUA010000295.1 RefSeq gene 1566 2192 . - . ID=gene-L2557_RS16235;Name=upp;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=L2557_RS16235 NZ_JAIKUA010000295.1 Protein Homology CDS 1566 2192 . - 0 ID=cds-WP_075671900.1;Parent=gene-L2557_RS16235;Dbxref=GenBank:WP_075671900.1;Name=WP_075671900.1;Ontology_term=GO:0009116,GO:0004845;gbkey=CDS;gene=upp;go_function=uracil phosphoribosyltransferase activity|0004845||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001295473.1;locus_tag=L2557_RS16235;product=uracil phosphoribosyltransferase;protein_id=WP_075671900.1;transl_table=11 NZ_JAIKUA010000295.1 RefSeq gene 2424 3464 . + . ID=gene-L2557_RS16240;Name=purM;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=L2557_RS16240 NZ_JAIKUA010000295.1 Protein Homology CDS 2424 3464 . + 0 ID=cds-WP_075671902.1;Parent=gene-L2557_RS16240;Dbxref=GenBank:WP_075671902.1;Name=WP_075671902.1;Ontology_term=GO:0006189,GO:0004641;gbkey=CDS;gene=purM;go_function=phosphoribosylformylglycinamidine cyclo-ligase activity|0004641||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248288.1;locus_tag=L2557_RS16240;product=phosphoribosylformylglycinamidine cyclo-ligase;protein_id=WP_075671902.1;transl_table=11 NZ_JAIKUA010000295.1 RefSeq gene 3478 4107 . + . ID=gene-L2557_RS16245;Name=purN;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=L2557_RS16245 NZ_JAIKUA010000295.1 Protein Homology CDS 3478 4107 . + 0 ID=cds-WP_099660592.1;Parent=gene-L2557_RS16245;Dbxref=GenBank:WP_099660592.1;Name=WP_099660592.1;Ontology_term=GO:0006189,GO:0004644;gbkey=CDS;gene=purN;go_function=phosphoribosylglycinamide formyltransferase activity|0004644||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533053.1;locus_tag=L2557_RS16245;product=phosphoribosylglycinamide formyltransferase;protein_id=WP_099660592.1;transl_table=11 NZ_JAIKUA010000295.1 RefSeq gene 4214 4804 . + . ID=gene-L2557_RS16250;Name=speG;gbkey=Gene;gene=speG;gene_biotype=protein_coding;locus_tag=L2557_RS16250 NZ_JAIKUA010000295.1 Protein Homology CDS 4214 4804 . + 0 ID=cds-WP_075671906.1;Parent=gene-L2557_RS16250;Dbxref=GenBank:WP_075671906.1;Name=WP_075671906.1;Ontology_term=GO:0008080;gbkey=CDS;gene=speG;go_function=N-acetyltransferase activity|0008080||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243436.1;locus_tag=L2557_RS16250;product=spermidine N1-acetyltransferase;protein_id=WP_075671906.1;transl_table=11 NZ_JAIKUA010000295.1 RefSeq gene 4851 6932 . + . ID=gene-L2557_RS16255;Name=ppk1;gbkey=Gene;gene=ppk1;gene_biotype=protein_coding;locus_tag=L2557_RS16255 NZ_JAIKUA010000295.1 Protein Homology CDS 4851 6932 . + 0 ID=cds-WP_075671908.1;Parent=gene-L2557_RS16255;Dbxref=GenBank:WP_075671908.1;Name=WP_075671908.1;Ontology_term=GO:0006799,GO:0008976,GO:0009358;gbkey=CDS;gene=ppk1;go_component=polyphosphate kinase complex|0009358||IEA;go_function=polyphosphate kinase activity|0008976||IEA;go_process=polyphosphate biosynthetic process|0006799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243437.1;locus_tag=L2557_RS16255;product=polyphosphate kinase 1;protein_id=WP_075671908.1;transl_table=11 NZ_JAIKUA010000295.1 RefSeq gene 6937 8469 . + . ID=gene-L2557_RS16260;Name=ppx;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=L2557_RS16260 NZ_JAIKUA010000295.1 Protein Homology CDS 6937 8469 . + 0 ID=cds-WP_099660593.1;Parent=gene-L2557_RS16260;Dbxref=GenBank:WP_099660593.1;Name=WP_099660593.1;Ontology_term=GO:0006798,GO:0000287,GO:0004309;gbkey=CDS;gene=ppx;go_function=magnesium ion binding|0000287||IEA,exopolyphosphatase activity|0004309||IEA;go_process=polyphosphate catabolic process|0006798||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243438.1;locus_tag=L2557_RS16260;product=exopolyphosphatase;protein_id=WP_099660593.1;transl_table=11 NZ_JAIKUA010000295.1 RefSeq gene 8702 10165 . + . ID=gene-L2557_RS16265;Name=mgtE;gbkey=Gene;gene=mgtE;gene_biotype=protein_coding;locus_tag=L2557_RS16265 NZ_JAIKUA010000295.1 Protein Homology CDS 8702 10165 . + 0 ID=cds-WP_075671912.1;Parent=gene-L2557_RS16265;Dbxref=GenBank:WP_075671912.1;Name=WP_075671912.1;Ontology_term=GO:0015693,GO:0015095,GO:0016020;gbkey=CDS;gene=mgtE;go_component=membrane|0016020||IEA;go_function=magnesium ion transmembrane transporter activity|0015095||IEA;go_process=magnesium ion transport|0015693||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243440.1;locus_tag=L2557_RS16265;product=magnesium transporter;protein_id=WP_075671912.1;transl_table=11 NZ_JAIKUA010000295.1 RefSeq gene 10234 10455 . - . ID=gene-L2557_RS16270;Name=L2557_RS16270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16270 NZ_JAIKUA010000295.1 Protein Homology CDS 10234 10455 . - 0 ID=cds-WP_099660594.1;Parent=gene-L2557_RS16270;Dbxref=GenBank:WP_099660594.1;Name=WP_099660594.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827488.1;locus_tag=L2557_RS16270;product=hypothetical protein;protein_id=WP_099660594.1;transl_table=11 ##sequence-region NZ_JAIKUA010000296.1 1 2480 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000296.1 RefSeq region 1 2480 . + . ID=NZ_JAIKUA010000296.1:1..2480;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000296.1 RefSeq gene 193 744 . - . ID=gene-L2557_RS16275;Name=L2557_RS16275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16275 NZ_JAIKUA010000296.1 Protein Homology CDS 193 744 . - 0 ID=cds-WP_075673384.1;Parent=gene-L2557_RS16275;Dbxref=GenBank:WP_075673384.1;Name=WP_075673384.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367827.1;locus_tag=L2557_RS16275;product=class IV adenylate cyclase;protein_id=WP_075673384.1;transl_table=11 NZ_JAIKUA010000296.1 RefSeq gene 987 1367 . - . ID=gene-L2557_RS16280;Name=L2557_RS16280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16280 NZ_JAIKUA010000296.1 Protein Homology CDS 987 1367 . - 0 ID=cds-WP_235410206.1;Parent=gene-L2557_RS16280;Dbxref=GenBank:WP_235410206.1;Name=WP_235410206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247927.1;locus_tag=L2557_RS16280;product=DUF2628 domain-containing protein;protein_id=WP_235410206.1;transl_table=11 NZ_JAIKUA010000296.1 RefSeq gene 1683 2117 . - . ID=gene-L2557_RS16285;Name=L2557_RS16285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16285 NZ_JAIKUA010000296.1 Protein Homology CDS 1683 2117 . - 0 ID=cds-WP_072062602.1;Parent=gene-L2557_RS16285;Dbxref=GenBank:WP_072062602.1;Name=WP_072062602.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827228.1;locus_tag=L2557_RS16285;product=universal stress protein;protein_id=WP_072062602.1;transl_table=11 ##sequence-region NZ_JAIKUA010000297.1 1 5240 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000297.1 RefSeq region 1 5240 . + . ID=NZ_JAIKUA010000297.1:1..5240;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000297.1 RefSeq gene 1020 2570 . - . ID=gene-L2557_RS16290;Name=L2557_RS16290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16290 NZ_JAIKUA010000297.1 Protein Homology CDS 1020 2570 . - 0 ID=cds-WP_235410207.1;Parent=gene-L2557_RS16290;Dbxref=GenBank:WP_235410207.1;Name=WP_235410207.1;Ontology_term=GO:0006935;gbkey=CDS;go_process=chemotaxis|0006935||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006780830.1;locus_tag=L2557_RS16290;product=methyl-accepting chemotaxis protein;protein_id=WP_235410207.1;transl_table=11 NZ_JAIKUA010000297.1 RefSeq gene 3078 3656 . + . ID=gene-L2557_RS16295;Name=L2557_RS16295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16295 NZ_JAIKUA010000297.1 Protein Homology CDS 3078 3656 . + 0 ID=cds-WP_075673651.1;Parent=gene-L2557_RS16295;Dbxref=GenBank:WP_075673651.1;Name=WP_075673651.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250416.1;locus_tag=L2557_RS16295;product=phosphoglycerate mutase family protein;protein_id=WP_075673651.1;transl_table=11 NZ_JAIKUA010000297.1 RefSeq gene 3747 4634 . + . ID=gene-L2557_RS16300;Name=L2557_RS16300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16300 NZ_JAIKUA010000297.1 Protein Homology CDS 3747 4634 . + 0 ID=cds-WP_099659346.1;Parent=gene-L2557_RS16300;Dbxref=GenBank:WP_099659346.1;Name=WP_099659346.1;Ontology_term=GO:0009058,GO:0016853,GO:0005737;gbkey=CDS;go_component=cytoplasm|0005737||IEA;go_function=isomerase activity|0016853||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827207.1;locus_tag=L2557_RS16300;product=PhzF family phenazine biosynthesis protein;protein_id=WP_099659346.1;transl_table=11 ##sequence-region NZ_JAIKUA010000298.1 1 4843 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000298.1 RefSeq region 1 4843 . + . ID=NZ_JAIKUA010000298.1:1..4843;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000298.1 RefSeq gene 242 1567 . + . ID=gene-L2557_RS16305;Name=rlmD;gbkey=Gene;gene=rlmD;gene_biotype=protein_coding;locus_tag=L2557_RS16305 NZ_JAIKUA010000298.1 Protein Homology CDS 242 1567 . + 0 ID=cds-WP_099659929.1;Parent=gene-L2557_RS16305;Dbxref=GenBank:WP_099659929.1;Name=WP_099659929.1;Ontology_term=GO:0006396,GO:0008173;gbkey=CDS;gene=rlmD;go_function=RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247291.1;locus_tag=L2557_RS16305;product=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD;protein_id=WP_099659929.1;transl_table=11 NZ_JAIKUA010000298.1 RefSeq gene 1639 3876 . + . ID=gene-L2557_RS16310;Name=relA;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=L2557_RS16310 NZ_JAIKUA010000298.1 Protein Homology CDS 1639 3876 . + 0 ID=cds-WP_075673388.1;Parent=gene-L2557_RS16310;Dbxref=GenBank:WP_075673388.1;Name=WP_075673388.1;Ontology_term=GO:0015969;gbkey=CDS;gene=relA;go_process=guanosine tetraphosphate metabolic process|0015969||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244986.1;locus_tag=L2557_RS16310;product=GTP diphosphokinase;protein_id=WP_075673388.1;transl_table=11 NZ_JAIKUA010000298.1 RefSeq gene 3979 4776 . + . ID=gene-L2557_RS16315;Name=mazG;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=L2557_RS16315 NZ_JAIKUA010000298.1 Protein Homology CDS 3979 4776 . + 0 ID=cds-WP_099659928.1;Parent=gene-L2557_RS16315;Dbxref=GenBank:WP_099659928.1;Name=WP_099659928.1;gbkey=CDS;gene=mazG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252484.1;locus_tag=L2557_RS16315;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=WP_099659928.1;transl_table=11 ##sequence-region NZ_JAIKUA010000299.1 1 739 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000299.1 RefSeq region 1 739 . + . ID=NZ_JAIKUA010000299.1:1..739;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000299.1 RefSeq gene 1 739 . + . ID=gene-L2557_RS16320;Name=L2557_RS16320;end_range=739,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16320;partial=true;start_range=.,1 NZ_JAIKUA010000299.1 GeneMarkS-2+ CDS 1 739 . + 1 ID=cds-WP_235410208.1;Parent=gene-L2557_RS16320;Dbxref=GenBank:WP_235410208.1;Name=WP_235410208.1;end_range=739,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS16320;partial=true;product=hypothetical protein;protein_id=WP_235410208.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000003.1 1 58908 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000003.1 RefSeq region 1 58908 . + . ID=NZ_JAIKUA010000003.1:1..58908;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000003.1 RefSeq gene 135 431 . - . ID=gene-L2557_RS00225;Name=fis;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=L2557_RS00225 NZ_JAIKUA010000003.1 Protein Homology CDS 135 431 . - 0 ID=cds-WP_004245342.1;Parent=gene-L2557_RS00225;Dbxref=GenBank:WP_004245342.1;Name=WP_004245342.1;gbkey=CDS;gene=fis;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001465625.1;locus_tag=L2557_RS00225;product=DNA-binding transcriptional regulator Fis;protein_id=WP_004245342.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 452 1423 . - . ID=gene-L2557_RS00230;Name=dusB;gbkey=Gene;gene=dusB;gene_biotype=protein_coding;locus_tag=L2557_RS00230 NZ_JAIKUA010000003.1 Protein Homology CDS 452 1423 . - 0 ID=cds-WP_069368388.1;Parent=gene-L2557_RS00230;Dbxref=GenBank:WP_069368388.1;Name=WP_069368388.1;Ontology_term=GO:0008033,GO:0017150,GO:0050660;gbkey=CDS;gene=dusB;go_function=tRNA dihydrouridine synthase activity|0017150||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245341.1;locus_tag=L2557_RS00230;product=tRNA dihydrouridine synthase DusB;protein_id=WP_069368388.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 1745 2626 . - . ID=gene-L2557_RS00235;Name=prmA;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=L2557_RS00235 NZ_JAIKUA010000003.1 Protein Homology CDS 1745 2626 . - 0 ID=cds-WP_235409716.1;Parent=gene-L2557_RS00235;Dbxref=GenBank:WP_235409716.1;Name=WP_235409716.1;Ontology_term=GO:0036211,GO:0008757;gbkey=CDS;gene=prmA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005163101.1;locus_tag=L2557_RS00235;product=50S ribosomal protein L11 methyltransferase;protein_id=WP_235409716.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 2650 4095 . - . ID=gene-L2557_RS00240;Name=panF;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=L2557_RS00240 NZ_JAIKUA010000003.1 Protein Homology CDS 2650 4095 . - 0 ID=cds-WP_235409722.1;Parent=gene-L2557_RS00240;Dbxref=GenBank:WP_235409722.1;Name=WP_235409722.1;Ontology_term=GO:0015887,GO:0036376,GO:0015081,GO:0015233,GO:0016020;gbkey=CDS;gene=panF;go_component=membrane|0016020||IEA;go_function=sodium ion transmembrane transporter activity|0015081||IEA,pantothenate transmembrane transporter activity|0015233||IEA;go_process=pantothenate transmembrane transport|0015887||IEA,sodium ion export across plasma membrane|0036376||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245338.1;locus_tag=L2557_RS00240;product=sodium/pantothenate symporter;protein_id=WP_235409722.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 4085 4333 . - . ID=gene-L2557_RS00245;Name=L2557_RS00245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00245 NZ_JAIKUA010000003.1 Protein Homology CDS 4085 4333 . - 0 ID=cds-WP_075671499.1;Parent=gene-L2557_RS00245;Dbxref=GenBank:WP_075671499.1;Name=WP_075671499.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245337.1;locus_tag=L2557_RS00245;product=YhdT family protein;protein_id=WP_075671499.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 4664 5866 . - . ID=gene-L2557_RS00250;Name=L2557_RS00250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00250 NZ_JAIKUA010000003.1 Protein Homology CDS 4664 5866 . - 0 ID=cds-WP_235409717.1;Parent=gene-L2557_RS00250;Dbxref=GenBank:WP_235409717.1;Name=WP_235409717.1;Ontology_term=GO:0009086,GO:0030170,GO:0047804;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019105533.1;locus_tag=L2557_RS00250;product=MalY/PatB family protein;protein_id=WP_235409717.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 5895 7118 . - . ID=gene-L2557_RS00255;Name=L2557_RS00255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00255 NZ_JAIKUA010000003.1 Protein Homology CDS 5895 7118 . - 0 ID=cds-WP_371317019.1;Parent=gene-L2557_RS00255;Dbxref=GenBank:WP_371317019.1;Name=WP_371317019.1;Ontology_term=GO:0003333;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001549686.1;locus_tag=L2557_RS00255;product=aromatic amino acid transport family protein;protein_id=WP_371317019.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 7462 7920 . + . ID=gene-L2557_RS00260;Name=L2557_RS00260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00260 NZ_JAIKUA010000003.1 Protein Homology CDS 7462 7920 . + 0 ID=cds-WP_075671493.1;Parent=gene-L2557_RS00260;Dbxref=GenBank:WP_075671493.1;Name=WP_075671493.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: protein motif:HMM:NF013224.6;locus_tag=L2557_RS00260;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_075671493.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 7994 9343 . - . ID=gene-L2557_RS00265;Name=accC;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=L2557_RS00265 NZ_JAIKUA010000003.1 Protein Homology CDS 7994 9343 . - 0 ID=cds-WP_075671491.1;Parent=gene-L2557_RS00265;Dbxref=GenBank:WP_075671491.1;Name=WP_075671491.1;Ontology_term=GO:0004075,GO:0016874,GO:0009317;gbkey=CDS;gene=accC;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=biotin carboxylase activity|0004075||IEA,ligase activity|0016874||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013577297.1;locus_tag=L2557_RS00265;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=WP_075671491.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 9356 9826 . - . ID=gene-L2557_RS00270;Name=accB;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=L2557_RS00270 NZ_JAIKUA010000003.1 Protein Homology CDS 9356 9826 . - 0 ID=cds-WP_075671489.1;Parent=gene-L2557_RS00270;Dbxref=GenBank:WP_075671489.1;Name=WP_075671489.1;Ontology_term=GO:0006633,GO:0003989,GO:0009317;gbkey=CDS;gene=accB;go_component=acetyl-CoA carboxylase complex|0009317||IEA;go_function=acetyl-CoA carboxylase activity|0003989||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006120982.1;locus_tag=L2557_RS00270;product=acetyl-CoA carboxylase biotin carboxyl carrier protein;protein_id=WP_075671489.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 9860 10303 . - . ID=gene-L2557_RS00275;Name=aroQ;gbkey=Gene;gene=aroQ;gene_biotype=protein_coding;locus_tag=L2557_RS00275 NZ_JAIKUA010000003.1 Protein Homology CDS 9860 10303 . - 0 ID=cds-WP_075671487.1;Parent=gene-L2557_RS00275;Dbxref=GenBank:WP_075671487.1;Name=WP_075671487.1;Ontology_term=GO:0009423,GO:0003855;gbkey=CDS;gene=aroQ;go_function=3-dehydroquinate dehydratase activity|0003855||IEA;go_process=chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245332.1;locus_tag=L2557_RS00275;product=type II 3-dehydroquinate dehydratase;protein_id=WP_075671487.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 10734 11708 . - . ID=gene-L2557_RS00280;Name=acuI;gbkey=Gene;gene=acuI;gene_biotype=protein_coding;locus_tag=L2557_RS00280 NZ_JAIKUA010000003.1 Protein Homology CDS 10734 11708 . - 0 ID=cds-WP_075671485.1;Parent=gene-L2557_RS00280;Dbxref=GenBank:WP_075671485.1;Name=WP_075671485.1;gbkey=CDS;gene=acuI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245331.1;locus_tag=L2557_RS00280;product=acrylyl-CoA reductase (NADPH);protein_id=WP_075671485.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 12398 13441 . + . ID=gene-L2557_RS00285;Name=mreB;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=L2557_RS00285 NZ_JAIKUA010000003.1 Protein Homology CDS 12398 13441 . + 0 ID=cds-WP_023582893.1;Parent=gene-L2557_RS00285;Dbxref=GenBank:WP_023582893.1;Name=WP_023582893.1;gbkey=CDS;gene=mreB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000913396.1;locus_tag=L2557_RS00285;product=rod shape-determining protein MreB;protein_id=WP_023582893.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 13533 14585 . + . ID=gene-L2557_RS00290;Name=mreC;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=L2557_RS00290 NZ_JAIKUA010000003.1 Protein Homology CDS 13533 14585 . + 0 ID=cds-WP_075671483.1;Parent=gene-L2557_RS00290;Dbxref=GenBank:WP_075671483.1;Name=WP_075671483.1;Ontology_term=GO:0008360;gbkey=CDS;gene=mreC;go_process=regulation of cell shape|0008360||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248904.1;locus_tag=L2557_RS00290;product=rod shape-determining protein MreC;protein_id=WP_075671483.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 14591 15079 . + . ID=gene-L2557_RS00295;Name=mreD;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=L2557_RS00295 NZ_JAIKUA010000003.1 Protein Homology CDS 14591 15079 . + 0 ID=cds-WP_075671481.1;Parent=gene-L2557_RS00295;Dbxref=GenBank:WP_075671481.1;Name=WP_075671481.1;gbkey=CDS;gene=mreD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148192.1;locus_tag=L2557_RS00295;product=rod shape-determining protein MreD;protein_id=WP_075671481.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 15132 15719 . + . ID=gene-L2557_RS00300;Name=L2557_RS00300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00300 NZ_JAIKUA010000003.1 Protein Homology CDS 15132 15719 . + 0 ID=cds-WP_075671479.1;Parent=gene-L2557_RS00300;Dbxref=GenBank:WP_075671479.1;Name=WP_075671479.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248907.1;locus_tag=L2557_RS00300;product=Maf family protein;protein_id=WP_075671479.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 15716 17185 . + . ID=gene-L2557_RS00305;Name=rng;gbkey=Gene;gene=rng;gene_biotype=protein_coding;locus_tag=L2557_RS00305 NZ_JAIKUA010000003.1 Protein Homology CDS 15716 17185 . + 0 ID=cds-WP_075671477.1;Parent=gene-L2557_RS00305;Dbxref=GenBank:WP_075671477.1;Name=WP_075671477.1;Ontology_term=GO:0006396,GO:0003723,GO:0004540;gbkey=CDS;gene=rng;go_function=RNA binding|0003723||IEA,RNA nuclease activity|0004540||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229086.1;locus_tag=L2557_RS00305;product=ribonuclease G;protein_id=WP_075671477.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 17231 21031 . + . ID=gene-L2557_RS00310;Name=yhdP;gbkey=Gene;gene=yhdP;gene_biotype=protein_coding;locus_tag=L2557_RS00310 NZ_JAIKUA010000003.1 Protein Homology CDS 17231 21031 . + 0 ID=cds-WP_235409718.1;Parent=gene-L2557_RS00310;Dbxref=GenBank:WP_235409718.1;Name=WP_235409718.1;gbkey=CDS;gene=yhdP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827058.1;locus_tag=L2557_RS00310;product=AsmA2 domain-containing protein YhdP;protein_id=WP_235409718.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 21028 21888 . + . ID=gene-L2557_RS00315;Name=nit1;gbkey=Gene;gene=nit1;gene_biotype=protein_coding;locus_tag=L2557_RS00315 NZ_JAIKUA010000003.1 Protein Homology CDS 21028 21888 . + 0 ID=cds-WP_072063785.1;Parent=gene-L2557_RS00315;Dbxref=GenBank:WP_072063785.1;Name=WP_072063785.1;Ontology_term=GO:0008152,GO:0110050;gbkey=CDS;gene=nit1;go_function=deaminated glutathione amidase activity|0110050||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245324.1;locus_tag=L2557_RS00315;product=deaminated glutathione amidase;protein_id=WP_072063785.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 21885 23330 . + . ID=gene-L2557_RS00320;Name=tldD;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=L2557_RS00320 NZ_JAIKUA010000003.1 Protein Homology CDS 21885 23330 . + 0 ID=cds-WP_075671473.1;Parent=gene-L2557_RS00320;Dbxref=GenBank:WP_075671473.1;Name=WP_075671473.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=tldD;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007888214.1;locus_tag=L2557_RS00320;product=metalloprotease TldD;protein_id=WP_075671473.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 23417 23917 . + . ID=gene-L2557_RS00325;Name=L2557_RS00325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00325 NZ_JAIKUA010000003.1 Protein Homology CDS 23417 23917 . + 0 ID=cds-WP_075671471.1;Parent=gene-L2557_RS00325;Dbxref=GenBank:WP_075671471.1;Name=WP_075671471.1;Ontology_term=GO:0003723,GO:0004521;gbkey=CDS;go_function=RNA binding|0003723||IEA,RNA endonuclease activity|0004521||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252704.1;locus_tag=L2557_RS00325;product=ribonuclease domain-containing protein;protein_id=WP_075671471.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 23917 24198 . + . ID=gene-L2557_RS00330;Name=L2557_RS00330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00330 NZ_JAIKUA010000003.1 Protein Homology CDS 23917 24198 . + 0 ID=cds-WP_075671469.1;Parent=gene-L2557_RS00330;Dbxref=GenBank:WP_075671469.1;Name=WP_075671469.1;Ontology_term=GO:0046983;gbkey=CDS;go_function=protein dimerization activity|0046983||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245317.1;locus_tag=L2557_RS00330;product=barstar family protein;protein_id=WP_075671469.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 24272 24832 . - . ID=gene-L2557_RS00335;Name=yjgA;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=L2557_RS00335 NZ_JAIKUA010000003.1 Protein Homology CDS 24272 24832 . - 0 ID=cds-WP_075671509.1;Parent=gene-L2557_RS00335;Dbxref=GenBank:WP_075671509.1;Name=WP_075671509.1;Ontology_term=GO:0042254;gbkey=CDS;gene=yjgA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248913.1;locus_tag=L2557_RS00335;product=ribosome biogenesis factor YjgA;protein_id=WP_075671509.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 25019 26347 . + . ID=gene-L2557_RS00340;Name=pmbA;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;locus_tag=L2557_RS00340 NZ_JAIKUA010000003.1 Protein Homology CDS 25019 26347 . + 0 ID=cds-WP_075671467.1;Parent=gene-L2557_RS00340;Dbxref=GenBank:WP_075671467.1;Name=WP_075671467.1;Ontology_term=GO:0006508,GO:0008237;gbkey=CDS;gene=pmbA;go_function=metallopeptidase activity|0008237||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252702.1;locus_tag=L2557_RS00340;product=metalloprotease PmbA;protein_id=WP_075671467.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 26465 26875 . - . ID=gene-L2557_RS00345;Name=rnk;gbkey=Gene;gene=rnk;gene_biotype=protein_coding;locus_tag=L2557_RS00345 NZ_JAIKUA010000003.1 Protein Homology CDS 26465 26875 . - 0 ID=cds-WP_075671465.1;Parent=gene-L2557_RS00345;Dbxref=GenBank:WP_075671465.1;Name=WP_075671465.1;Ontology_term=GO:0032784,GO:0003677,GO:0070063;gbkey=CDS;gene=rnk;go_function=DNA binding|0003677||IEA,RNA polymerase binding|0070063||IEA;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245312.1;locus_tag=L2557_RS00345;product=nucleoside diphosphate kinase regulator;protein_id=WP_075671465.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 27051 27323 . - . ID=gene-L2557_RS00350;Name=npr;gbkey=Gene;gene=npr;gene_biotype=protein_coding;locus_tag=L2557_RS00350 NZ_JAIKUA010000003.1 Protein Homology CDS 27051 27323 . - 0 ID=cds-WP_006535359.1;Parent=gene-L2557_RS00350;Dbxref=GenBank:WP_006535359.1;Name=WP_006535359.1;gbkey=CDS;gene=npr;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245309.1;locus_tag=L2557_RS00350;product=PTS phosphocarrier protein NPr;protein_id=WP_006535359.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 27320 28174 . - . ID=gene-L2557_RS00355;Name=rapZ;gbkey=Gene;gene=rapZ;gene_biotype=protein_coding;locus_tag=L2557_RS00355 NZ_JAIKUA010000003.1 Protein Homology CDS 27320 28174 . - 0 ID=cds-WP_064718868.1;Parent=gene-L2557_RS00355;Dbxref=GenBank:WP_064718868.1;Name=WP_064718868.1;Ontology_term=GO:0005524;gbkey=CDS;gene=rapZ;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245308.1;locus_tag=L2557_RS00355;product=RNase adapter RapZ;protein_id=WP_064718868.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 28254 28721 . - . ID=gene-L2557_RS00360;Name=ptsN;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=L2557_RS00360 NZ_JAIKUA010000003.1 Protein Homology CDS 28254 28721 . - 0 ID=cds-WP_099660013.1;Parent=gene-L2557_RS00360;Dbxref=GenBank:WP_099660013.1;Name=WP_099660013.1;gbkey=CDS;gene=ptsN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245307.1;locus_tag=L2557_RS00360;product=PTS IIA-like nitrogen regulatory protein PtsN;protein_id=WP_099660013.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 28871 29158 . - . ID=gene-L2557_RS00365;Name=hpf;gbkey=Gene;gene=hpf;gene_biotype=protein_coding;locus_tag=L2557_RS00365 NZ_JAIKUA010000003.1 Protein Homology CDS 28871 29158 . - 0 ID=cds-WP_036913954.1;Parent=gene-L2557_RS00365;Dbxref=GenBank:WP_036913954.1;Name=WP_036913954.1;Ontology_term=GO:0044238;gbkey=CDS;gene=hpf;go_process=primary metabolic process|0044238||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004125711.1;locus_tag=L2557_RS00365;product=ribosome hibernation promoting factor;protein_id=WP_036913954.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 29182 30663 . - . ID=gene-L2557_RS00370;Name=rpoN;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=L2557_RS00370 NZ_JAIKUA010000003.1 Protein Homology CDS 29182 30663 . - 0 ID=cds-WP_099660012.1;Parent=gene-L2557_RS00370;Dbxref=GenBank:WP_099660012.1;Name=WP_099660012.1;Ontology_term=GO:0006352,GO:0001216,GO:0003677,GO:0016987;gbkey=CDS;gene=rpoN;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245305.1;locus_tag=L2557_RS00370;product=RNA polymerase factor sigma-54;protein_id=WP_099660012.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 30723 31448 . - . ID=gene-L2557_RS00375;Name=lptB;gbkey=Gene;gene=lptB;gene_biotype=protein_coding;locus_tag=L2557_RS00375 NZ_JAIKUA010000003.1 Protein Homology CDS 30723 31448 . - 0 ID=cds-WP_006535352.1;Parent=gene-L2557_RS00375;Dbxref=GenBank:WP_006535352.1;Name=WP_006535352.1;Ontology_term=GO:0055085,GO:0005524,GO:0043190;gbkey=CDS;gene=lptB;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003861862.1;locus_tag=L2557_RS00375;product=LPS export ABC transporter ATP-binding protein;protein_id=WP_006535352.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 31455 31988 . - . ID=gene-L2557_RS00380;Name=lptA;gbkey=Gene;gene=lptA;gene_biotype=protein_coding;locus_tag=L2557_RS00380 NZ_JAIKUA010000003.1 Protein Homology CDS 31455 31988 . - 0 ID=cds-WP_075671459.1;Parent=gene-L2557_RS00380;Dbxref=GenBank:WP_075671459.1;Name=WP_075671459.1;gbkey=CDS;gene=lptA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245303.1;locus_tag=L2557_RS00380;product=lipopolysaccharide ABC transporter substrate-binding protein LptA;protein_id=WP_075671459.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 31969 32547 . - . ID=gene-L2557_RS00385;Name=lptC;gbkey=Gene;gene=lptC;gene_biotype=protein_coding;locus_tag=L2557_RS00385 NZ_JAIKUA010000003.1 Protein Homology CDS 31969 32547 . - 0 ID=cds-WP_075671457.1;Parent=gene-L2557_RS00385;Dbxref=GenBank:WP_075671457.1;Name=WP_075671457.1;gbkey=CDS;gene=lptC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535350.1;locus_tag=L2557_RS00385;product=LPS export ABC transporter periplasmic protein LptC;protein_id=WP_075671457.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 32564 33121 . - . ID=gene-L2557_RS00390;Name=kdsC;gbkey=Gene;gene=kdsC;gene_biotype=protein_coding;locus_tag=L2557_RS00390 NZ_JAIKUA010000003.1 Protein Homology CDS 32564 33121 . - 0 ID=cds-WP_075671455.1;Parent=gene-L2557_RS00390;Dbxref=GenBank:WP_075671455.1;Name=WP_075671455.1;Ontology_term=GO:0016788;gbkey=CDS;gene=kdsC;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535349.1;locus_tag=L2557_RS00390;product=3-deoxy-manno-octulosonate-8-phosphatase KdsC;protein_id=WP_075671455.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 33149 34123 . - . ID=gene-L2557_RS00395;Name=kdsD;gbkey=Gene;gene=kdsD;gene_biotype=protein_coding;locus_tag=L2557_RS00395 NZ_JAIKUA010000003.1 Protein Homology CDS 33149 34123 . - 0 ID=cds-WP_075671453.1;Parent=gene-L2557_RS00395;Dbxref=GenBank:WP_075671453.1;Name=WP_075671453.1;Ontology_term=GO:1901135,GO:0016853,GO:0097367;gbkey=CDS;gene=kdsD;go_function=isomerase activity|0016853||IEA,carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245300.1;locus_tag=L2557_RS00395;product=arabinose-5-phosphate isomerase KdsD;protein_id=WP_075671453.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 34142 35122 . - . ID=gene-L2557_RS00400;Name=L2557_RS00400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00400 NZ_JAIKUA010000003.1 Protein Homology CDS 34142 35122 . - 0 ID=cds-WP_075671451.1;Parent=gene-L2557_RS00400;Dbxref=GenBank:WP_075671451.1;Name=WP_075671451.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368835.1;locus_tag=L2557_RS00400;product=calcium/sodium antiporter;protein_id=WP_075671451.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 35363 36175 . + . ID=gene-L2557_RS00405;Name=mlaF;gbkey=Gene;gene=mlaF;gene_biotype=protein_coding;locus_tag=L2557_RS00405 NZ_JAIKUA010000003.1 Protein Homology CDS 35363 36175 . + 0 ID=cds-WP_075671449.1;Parent=gene-L2557_RS00405;Dbxref=GenBank:WP_075671449.1;Name=WP_075671449.1;Ontology_term=GO:0005524;gbkey=CDS;gene=mlaF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245298.1;locus_tag=L2557_RS00405;product=phospholipid ABC transporter ATP-binding protein MlaF;protein_id=WP_075671449.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 36179 36958 . + . ID=gene-L2557_RS00410;Name=mlaE;gbkey=Gene;gene=mlaE;gene_biotype=protein_coding;locus_tag=L2557_RS00410 NZ_JAIKUA010000003.1 Protein Homology CDS 36179 36958 . + 0 ID=cds-WP_075671447.1;Parent=gene-L2557_RS00410;Dbxref=GenBank:WP_075671447.1;Name=WP_075671447.1;Ontology_term=GO:0043190;gbkey=CDS;gene=mlaE;go_component=ATP-binding cassette (ABC) transporter complex|0043190||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245297.1;locus_tag=L2557_RS00410;product=lipid asymmetry maintenance ABC transporter permease subunit MlaE;protein_id=WP_075671447.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 36962 37498 . + . ID=gene-L2557_RS00415;Name=mlaD;gbkey=Gene;gene=mlaD;gene_biotype=protein_coding;locus_tag=L2557_RS00415 NZ_JAIKUA010000003.1 Protein Homology CDS 36962 37498 . + 0 ID=cds-WP_075671445.1;Parent=gene-L2557_RS00415;Dbxref=GenBank:WP_075671445.1;Name=WP_075671445.1;Ontology_term=GO:0015914;gbkey=CDS;gene=mlaD;go_process=phospholipid transport|0015914||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252690.1;locus_tag=L2557_RS00415;product=outer membrane lipid asymmetry maintenance protein MlaD;protein_id=WP_075671445.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 37585 38214 . + . ID=gene-L2557_RS00420;Name=mlaC;gbkey=Gene;gene=mlaC;gene_biotype=protein_coding;locus_tag=L2557_RS00420 NZ_JAIKUA010000003.1 Protein Homology CDS 37585 38214 . + 0 ID=cds-WP_075671443.1;Parent=gene-L2557_RS00420;Dbxref=GenBank:WP_075671443.1;Name=WP_075671443.1;gbkey=CDS;gene=mlaC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245295.1;locus_tag=L2557_RS00420;product=phospholipid-binding protein MlaC;protein_id=WP_075671443.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 38216 38509 . + . ID=gene-L2557_RS00425;Name=mlaB;gbkey=Gene;gene=mlaB;gene_biotype=protein_coding;locus_tag=L2557_RS00425 NZ_JAIKUA010000003.1 Protein Homology CDS 38216 38509 . + 0 ID=cds-WP_075671441.1;Parent=gene-L2557_RS00425;Dbxref=GenBank:WP_075671441.1;Name=WP_075671441.1;gbkey=CDS;gene=mlaB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004722372.1;locus_tag=L2557_RS00425;product=lipid asymmetry maintenance protein MlaB;protein_id=WP_075671441.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 38650 38904 . + . ID=gene-L2557_RS00430;Name=ibaG;gbkey=Gene;gene=ibaG;gene_biotype=protein_coding;locus_tag=L2557_RS00430 NZ_JAIKUA010000003.1 Protein Homology CDS 38650 38904 . + 0 ID=cds-WP_235409719.1;Parent=gene-L2557_RS00430;Dbxref=GenBank:WP_235409719.1;Name=WP_235409719.1;gbkey=CDS;gene=ibaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245293.1;locus_tag=L2557_RS00430;product=BolA family iron metabolism protein IbaG;protein_id=WP_235409719.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 38953 40215 . + . ID=gene-L2557_RS00435;Name=murA;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=L2557_RS00435 NZ_JAIKUA010000003.1 Protein Homology CDS 38953 40215 . + 0 ID=cds-WP_099660011.1;Parent=gene-L2557_RS00435;Dbxref=GenBank:WP_099660011.1;Name=WP_099660011.1;Ontology_term=GO:0019277,GO:0008760;gbkey=CDS;gene=murA;go_function=UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity|0008760||IEA;go_process=UDP-N-acetylgalactosamine biosynthetic process|0019277||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245292.1;locus_tag=L2557_RS00435;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=WP_099660011.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 40413 41474 . + . ID=gene-L2557_RS00440;Name=L2557_RS00440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00440 NZ_JAIKUA010000003.1 Protein Homology CDS 40413 41474 . + 0 ID=cds-WP_075671437.1;Parent=gene-L2557_RS00440;Dbxref=GenBank:WP_075671437.1;Name=WP_075671437.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535335.1;locus_tag=L2557_RS00440;product=DUF2157 domain-containing protein;protein_id=WP_075671437.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 41508 41753 . + . ID=gene-L2557_RS00445;Name=L2557_RS00445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00445 NZ_JAIKUA010000003.1 Protein Homology CDS 41508 41753 . + 0 ID=cds-WP_075671435.1;Parent=gene-L2557_RS00445;Dbxref=GenBank:WP_075671435.1;Name=WP_075671435.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535334.1;locus_tag=L2557_RS00445;product=CPCC family cysteine-rich protein;protein_id=WP_075671435.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 41780 42850 . - . ID=gene-L2557_RS00450;Name=degS;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=L2557_RS00450 NZ_JAIKUA010000003.1 Protein Homology CDS 41780 42850 . - 0 ID=cds-WP_075671433.1;Parent=gene-L2557_RS00450;Dbxref=GenBank:WP_075671433.1;Name=WP_075671433.1;Ontology_term=GO:0006508,GO:0004252;gbkey=CDS;gene=degS;go_function=serine-type endopeptidase activity|0004252||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628225.1;locus_tag=L2557_RS00450;product=outer membrane-stress sensor serine endopeptidase DegS;protein_id=WP_075671433.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 43058 44449 . - . ID=gene-L2557_RS00455;Name=degQ;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=L2557_RS00455 NZ_JAIKUA010000003.1 Protein Homology CDS 43058 44449 . - 0 ID=cds-WP_075671431.1;Parent=gene-L2557_RS00455;Dbxref=GenBank:WP_075671431.1;Name=WP_075671431.1;Ontology_term=GO:0006508,GO:0004252,GO:0005515;gbkey=CDS;gene=degQ;go_function=serine-type endopeptidase activity|0004252||IEA,protein binding|0005515||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628226.1;locus_tag=L2557_RS00455;product=serine endoprotease DegQ;protein_id=WP_075671431.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 44679 45083 . - . ID=gene-L2557_RS00460;Name=zapG;gbkey=Gene;gene=zapG;gene_biotype=protein_coding;locus_tag=L2557_RS00460 NZ_JAIKUA010000003.1 Protein Homology CDS 44679 45083 . - 0 ID=cds-WP_075671429.1;Parent=gene-L2557_RS00460;Dbxref=GenBank:WP_075671429.1;Name=WP_075671429.1;gbkey=CDS;gene=zapG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004236342.1;locus_tag=L2557_RS00460;product=Z-ring associated protein ZapG;protein_id=WP_075671429.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 45287 46402 . + . ID=gene-L2557_RS00465;Name=zapE;gbkey=Gene;gene=zapE;gene_biotype=protein_coding;locus_tag=L2557_RS00465 NZ_JAIKUA010000003.1 Protein Homology CDS 45287 46402 . + 0 ID=cds-WP_235409720.1;Parent=gene-L2557_RS00465;Dbxref=GenBank:WP_235409720.1;Name=WP_235409720.1;Ontology_term=GO:0051301,GO:0005524,GO:0016887;gbkey=CDS;gene=zapE;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245286.1;locus_tag=L2557_RS00465;product=cell division protein ZapE;protein_id=WP_235409720.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 46837 47265 . + . ID=gene-L2557_RS00470;Name=rplM;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=L2557_RS00470 NZ_JAIKUA010000003.1 Protein Homology CDS 46837 47265 . + 0 ID=cds-WP_006535327.1;Parent=gene-L2557_RS00470;Dbxref=GenBank:WP_006535327.1;Name=WP_006535327.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplM;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847760.1;locus_tag=L2557_RS00470;product=50S ribosomal protein L13;protein_id=WP_006535327.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 47281 47673 . + . ID=gene-L2557_RS00475;Name=rpsI;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=L2557_RS00475 NZ_JAIKUA010000003.1 Protein Homology CDS 47281 47673 . + 0 ID=cds-WP_004245284.1;Parent=gene-L2557_RS00475;Dbxref=GenBank:WP_004245284.1;Name=WP_004245284.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000829824.1;locus_tag=L2557_RS00475;product=30S ribosomal protein S9;protein_id=WP_004245284.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 48330 48971 . + . ID=gene-L2557_RS00480;Name=sspA;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=L2557_RS00480 NZ_JAIKUA010000003.1 Protein Homology CDS 48330 48971 . + 0 ID=cds-WP_075671425.1;Parent=gene-L2557_RS00480;Dbxref=GenBank:WP_075671425.1;Name=WP_075671425.1;Ontology_term=GO:0006749,GO:0005515;gbkey=CDS;gene=sspA;go_function=protein binding|0005515||IEA;go_process=glutathione metabolic process|0006749||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005162411.1;locus_tag=L2557_RS00480;product=stringent starvation protein SspA;protein_id=WP_075671425.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 48978 49487 . + . ID=gene-L2557_RS00485;Name=sspB;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=L2557_RS00485 NZ_JAIKUA010000003.1 Protein Homology CDS 48978 49487 . + 0 ID=cds-WP_099660009.1;Parent=gene-L2557_RS00485;Dbxref=GenBank:WP_099660009.1;Name=WP_099660009.1;gbkey=CDS;gene=sspB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004701342.1;locus_tag=L2557_RS00485;product=ClpXP protease specificity-enhancing factor;protein_id=WP_099660009.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 49604 50872 . - . ID=gene-L2557_RS00490;Name=L2557_RS00490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00490 NZ_JAIKUA010000003.1 Protein Homology CDS 49604 50872 . - 0 ID=cds-WP_075671421.1;Parent=gene-L2557_RS00490;Dbxref=GenBank:WP_075671421.1;Name=WP_075671421.1;Ontology_term=GO:0004180;gbkey=CDS;go_function=carboxypeptidase activity|0004180||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535322.1;locus_tag=L2557_RS00490;product=amidohydrolase;protein_id=WP_075671421.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 50887 52161 . - . ID=gene-L2557_RS00495;Name=dcuC;gbkey=Gene;gene=dcuC;gene_biotype=protein_coding;locus_tag=L2557_RS00495 NZ_JAIKUA010000003.1 Protein Homology CDS 50887 52161 . - 0 ID=cds-WP_099660008.1;Parent=gene-L2557_RS00495;Dbxref=GenBank:WP_099660008.1;Name=WP_099660008.1;Ontology_term=GO:0015740,GO:0015556,GO:0016020;gbkey=CDS;gene=dcuC;go_component=membrane|0016020||IEA;go_function=C4-dicarboxylate transmembrane transporter activity|0015556||IEA;go_process=C4-dicarboxylate transport|0015740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245277.1;locus_tag=L2557_RS00495;product=C4-dicarboxylate transporter DcuC;protein_id=WP_099660008.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 52664 54061 . - . ID=gene-L2557_RS00500;Name=L2557_RS00500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00500 NZ_JAIKUA010000003.1 Protein Homology CDS 52664 54061 . - 0 ID=cds-WP_099660007.1;Parent=gene-L2557_RS00500;Dbxref=GenBank:WP_099660007.1;Name=WP_099660007.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252677.1;locus_tag=L2557_RS00500;product=FAD-dependent oxidoreductase;protein_id=WP_099660007.1;transl_table=11 NZ_JAIKUA010000003.1 RefSeq gene 54071 58531 . - . ID=gene-L2557_RS00505;Name=gltB;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=L2557_RS00505 NZ_JAIKUA010000003.1 Protein Homology CDS 54071 58531 . - 0 ID=cds-WP_099660006.1;Parent=gene-L2557_RS00505;Dbxref=GenBank:WP_099660006.1;Name=WP_099660006.1;Ontology_term=GO:0006537,GO:0008152,GO:0003824,GO:0015930,GO:0016491;gbkey=CDS;gene=gltB;go_function=catalytic activity|0003824||IEA,glutamate synthase activity|0015930||IEA,oxidoreductase activity|0016491||IEA;go_process=glutamate biosynthetic process|0006537||IEA,metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002228691.1;locus_tag=L2557_RS00505;product=glutamate synthase large subunit;protein_id=WP_099660006.1;transl_table=11 ##sequence-region NZ_JAIKUA010000030.1 1 42031 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000030.1 RefSeq region 1 42031 . + . ID=NZ_JAIKUA010000030.1:1..42031;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000030.1 RefSeq gene 270 1853 . - . ID=gene-L2557_RS03035;Name=L2557_RS03035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03035 NZ_JAIKUA010000030.1 Protein Homology CDS 270 1853 . - 0 ID=cds-WP_099659254.1;Parent=gene-L2557_RS03035;Dbxref=GenBank:WP_099659254.1;Name=WP_099659254.1;Ontology_term=GO:0009244,GO:1900727,GO:0016776;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534369.1;locus_tag=L2557_RS03035;product=phosphoethanolamine transferase;protein_id=WP_099659254.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 2255 3910 . - . ID=gene-L2557_RS03040;Name=L2557_RS03040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03040 NZ_JAIKUA010000030.1 Protein Homology CDS 2255 3910 . - 0 ID=cds-WP_075672607.1;Parent=gene-L2557_RS03040;Dbxref=GenBank:WP_075672607.1;Name=WP_075672607.1;Ontology_term=GO:0006847,GO:0015293;gbkey=CDS;go_function=symporter activity|0015293||IEA;go_process=plasma membrane acetate transport|0006847||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004930048.1;locus_tag=L2557_RS03040;product=cation acetate symporter;protein_id=WP_075672607.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 3907 4218 . - . ID=gene-L2557_RS03045;Name=L2557_RS03045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03045 NZ_JAIKUA010000030.1 Protein Homology CDS 3907 4218 . - 0 ID=cds-WP_075672606.1;Parent=gene-L2557_RS03045;Dbxref=GenBank:WP_075672606.1;Name=WP_075672606.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209030.1;locus_tag=L2557_RS03045;product=DUF485 domain-containing protein;protein_id=WP_075672606.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 4378 6336 . - . ID=gene-L2557_RS03050;Name=acs;gbkey=Gene;gene=acs;gene_biotype=protein_coding;locus_tag=L2557_RS03050 NZ_JAIKUA010000030.1 Protein Homology CDS 4378 6336 . - 0 ID=cds-WP_075672605.1;Parent=gene-L2557_RS03050;Dbxref=GenBank:WP_075672605.1;Name=WP_075672605.1;Ontology_term=GO:0019427,GO:0003987,GO:0016208;gbkey=CDS;gene=acs;go_function=acetate-CoA ligase activity|0003987||IEA,AMP binding|0016208||IEA;go_process=acetyl-CoA biosynthetic process from acetate|0019427||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246622.1;locus_tag=L2557_RS03050;product=acetate--CoA ligase;protein_id=WP_075672605.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 6709 7332 . + . ID=gene-L2557_RS03055;Name=sodA;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=L2557_RS03055 NZ_JAIKUA010000030.1 Protein Homology CDS 6709 7332 . + 0 ID=cds-WP_075672604.1;Parent=gene-L2557_RS03055;Dbxref=GenBank:WP_075672604.1;Name=WP_075672604.1;Ontology_term=GO:0006801,GO:0004784;gbkey=CDS;gene=sodA;go_function=superoxide dismutase activity|0004784||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249861.1;locus_tag=L2557_RS03055;product=superoxide dismutase [Mn];protein_id=WP_075672604.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 7447 8121 . + . ID=gene-L2557_RS03060;Name=yiiM;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=L2557_RS03060 NZ_JAIKUA010000030.1 Protein Homology CDS 7447 8121 . + 0 ID=cds-WP_099659253.1;Parent=gene-L2557_RS03060;Dbxref=GenBank:WP_099659253.1;Name=WP_099659253.1;Ontology_term=GO:0003824,GO:0030151,GO:0030170;gbkey=CDS;gene=yiiM;go_function=catalytic activity|0003824||IEA,molybdenum ion binding|0030151||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249991.1;locus_tag=L2557_RS03060;product=6-hydroxyaminopurine reductase;protein_id=WP_099659253.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 8255 9283 . - . ID=gene-L2557_RS03065;Name=trpS;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=L2557_RS03065 NZ_JAIKUA010000030.1 Protein Homology CDS 8255 9283 . - 0 ID=cds-WP_075672602.1;Parent=gene-L2557_RS03065;Dbxref=GenBank:WP_075672602.1;Name=WP_075672602.1;Ontology_term=GO:0006436,GO:0000166,GO:0004830,GO:0005524;gbkey=CDS;gene=trpS;go_function=nucleotide binding|0000166||IEA,tryptophan-tRNA ligase activity|0004830||IEA,ATP binding|0005524||IEA;go_process=tryptophanyl-tRNA aminoacylation|0006436||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827156.1;locus_tag=L2557_RS03065;product=tryptophan--tRNA ligase;protein_id=WP_075672602.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 9285 9995 . - . ID=gene-L2557_RS03070;Name=L2557_RS03070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03070 NZ_JAIKUA010000030.1 Protein Homology CDS 9285 9995 . - 0 ID=cds-WP_099659252.1;Parent=gene-L2557_RS03070;Dbxref=GenBank:WP_099659252.1;Name=WP_099659252.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246628.1;locus_tag=L2557_RS03070;product=phosphoglycolate phosphatase;protein_id=WP_099659252.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 9995 10666 . - . ID=gene-L2557_RS03075;Name=rpe;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=L2557_RS03075 NZ_JAIKUA010000030.1 Protein Homology CDS 9995 10666 . - 0 ID=cds-WP_075672600.1;Parent=gene-L2557_RS03075;Dbxref=GenBank:WP_075672600.1;Name=WP_075672600.1;Ontology_term=GO:0006098,GO:0004750;gbkey=CDS;gene=rpe;go_function=D-ribulose-phosphate 3-epimerase activity|0004750||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534381.1;locus_tag=L2557_RS03075;product=ribulose-phosphate 3-epimerase;protein_id=WP_075672600.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 10711 11526 . - . ID=gene-L2557_RS03080;Name=dam;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=L2557_RS03080 NZ_JAIKUA010000030.1 Protein Homology CDS 10711 11526 . - 0 ID=cds-WP_075672599.1;Parent=gene-L2557_RS03080;Dbxref=GenBank:WP_075672599.1;Name=WP_075672599.1;Ontology_term=GO:0003676,GO:0009007;gbkey=CDS;gene=dam;go_function=nucleic acid binding|0003676||IEA,site-specific DNA-methyltransferase (adenine-specific) activity|0009007||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249858.1;locus_tag=L2557_RS03080;product=adenine-specific DNA-methyltransferase;protein_id=WP_075672599.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 11609 12538 . - . ID=gene-L2557_RS03085;Name=L2557_RS03085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03085 NZ_JAIKUA010000030.1 Protein Homology CDS 11609 12538 . - 0 ID=cds-WP_099659250.1;Parent=gene-L2557_RS03085;Dbxref=GenBank:WP_099659250.1;Name=WP_099659250.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827155.1;locus_tag=L2557_RS03085;product=SPOR domain-containing protein;protein_id=WP_099659250.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 12709 13803 . - . ID=gene-L2557_RS03090;Name=aroB;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=L2557_RS03090 NZ_JAIKUA010000030.1 Protein Homology CDS 12709 13803 . - 0 ID=cds-WP_161729782.1;Parent=gene-L2557_RS03090;Dbxref=GenBank:WP_161729782.1;Name=WP_161729782.1;Ontology_term=GO:0009073,GO:0009423,GO:0003856,GO:0005737;gbkey=CDS;gene=aroB;go_component=cytoplasm|0005737||IEA;go_function=3-dehydroquinate synthase activity|0003856||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA,chorismate biosynthetic process|0009423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827154.1;locus_tag=L2557_RS03090;product=3-dehydroquinate synthase;protein_id=WP_161729782.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 13858 14379 . - . ID=gene-L2557_RS03095;Name=aroK;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=L2557_RS03095 NZ_JAIKUA010000030.1 Protein Homology CDS 13858 14379 . - 0 ID=cds-WP_036914409.1;Parent=gene-L2557_RS03095;Dbxref=GenBank:WP_036914409.1;Name=WP_036914409.1;gbkey=CDS;gene=aroK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004709337.1;locus_tag=L2557_RS03095;product=shikimate kinase AroK;protein_id=WP_036914409.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 14961 16061 . - . ID=gene-L2557_RS03100;Name=pilQ;gbkey=Gene;gene=pilQ;gene_biotype=protein_coding;locus_tag=L2557_RS03100 NZ_JAIKUA010000030.1 Protein Homology CDS 14961 16061 . - 0 ID=cds-WP_099659248.1;Parent=gene-L2557_RS03100;Dbxref=GenBank:WP_099659248.1;Name=WP_099659248.1;Ontology_term=GO:0009297,GO:0009306;gbkey=CDS;gene=pilQ;go_process=pilus assembly|0009297||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534388.1;locus_tag=L2557_RS03100;product=type IV pilus secretin PilQ;protein_id=WP_099659248.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 16058 16588 . - . ID=gene-L2557_RS03105;Name=L2557_RS03105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03105 NZ_JAIKUA010000030.1 GeneMarkS-2+ CDS 16058 16588 . - 0 ID=cds-WP_099659247.1;Parent=gene-L2557_RS03105;Dbxref=GenBank:WP_099659247.1;Name=WP_099659247.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS03105;product=hypothetical protein;protein_id=WP_099659247.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 16585 17160 . - . ID=gene-L2557_RS03110;Name=L2557_RS03110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03110 NZ_JAIKUA010000030.1 GeneMarkS-2+ CDS 16585 17160 . - 0 ID=cds-WP_099659246.1;Parent=gene-L2557_RS03110;Dbxref=GenBank:WP_099659246.1;Name=WP_099659246.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS03110;product=fimbrial assembly protein;protein_id=WP_099659246.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 17148 17972 . - . ID=gene-L2557_RS03115;Name=L2557_RS03115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03115 NZ_JAIKUA010000030.1 Protein Homology CDS 17148 17972 . - 0 ID=cds-WP_099659245.1;Parent=gene-L2557_RS03115;Dbxref=GenBank:WP_099659245.1;Name=WP_099659245.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628605.1;locus_tag=L2557_RS03115;product=hypothetical protein;protein_id=WP_099659245.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 18088 20622 . + . ID=gene-L2557_RS03120;Name=mrcA;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=L2557_RS03120 NZ_JAIKUA010000030.1 Protein Homology CDS 18088 20622 . + 0 ID=cds-WP_099659244.1;Parent=gene-L2557_RS03120;Dbxref=GenBank:WP_099659244.1;Name=WP_099659244.1;Ontology_term=GO:0008658;gbkey=CDS;gene=mrcA;go_function=penicillin binding|0008658||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001400412.1;locus_tag=L2557_RS03120;product=peptidoglycan glycosyltransferase/peptidoglycan DD-transpeptidase MrcA;protein_id=WP_099659244.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 20669 21220 . - . ID=gene-L2557_RS03125;Name=nudE;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=L2557_RS03125 NZ_JAIKUA010000030.1 Protein Homology CDS 20669 21220 . - 0 ID=cds-WP_075672592.1;Parent=gene-L2557_RS03125;Dbxref=GenBank:WP_075672592.1;Name=WP_075672592.1;Ontology_term=GO:0016787;gbkey=CDS;gene=nudE;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534397.1;locus_tag=L2557_RS03125;product=ADP compounds hydrolase NudE;protein_id=WP_075672592.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 21574 23682 . + . ID=gene-L2557_RS03130;Name=umoB;gbkey=Gene;gene=umoB;gene_biotype=protein_coding;locus_tag=L2557_RS03130 NZ_JAIKUA010000030.1 Protein Homology CDS 21574 23682 . + 0 ID=cds-WP_075672591.1;Parent=gene-L2557_RS03130;Dbxref=GenBank:WP_075672591.1;Name=WP_075672591.1;gbkey=CDS;gene=umoB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_196545278.1;locus_tag=L2557_RS03130;product=flagellar biogenesis regulator UmoB;protein_id=WP_075672591.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 23754 24167 . + . ID=gene-L2557_RS03135;Name=hslR;gbkey=Gene;gene=hslR;gene_biotype=protein_coding;locus_tag=L2557_RS03135 NZ_JAIKUA010000030.1 Protein Homology CDS 23754 24167 . + 0 ID=cds-WP_072068950.1;Parent=gene-L2557_RS03135;Dbxref=GenBank:WP_072068950.1;Name=WP_072068950.1;gbkey=CDS;gene=hslR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246651.1;locus_tag=L2557_RS03135;product=ribosome-associated heat shock protein Hsp15;protein_id=WP_072068950.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 24194 25078 . + . ID=gene-L2557_RS03140;Name=hslO;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=L2557_RS03140 NZ_JAIKUA010000030.1 Protein Homology CDS 24194 25078 . + 0 ID=cds-WP_099659243.1;Parent=gene-L2557_RS03140;Dbxref=GenBank:WP_099659243.1;Name=WP_099659243.1;Ontology_term=GO:0006457,GO:0051082;gbkey=CDS;gene=hslO;go_function=unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246652.1;locus_tag=L2557_RS03140;product=Hsp33 family molecular chaperone HslO;protein_id=WP_099659243.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 25283 26902 . + . ID=gene-L2557_RS03145;Name=pckA;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=L2557_RS03145 NZ_JAIKUA010000030.1 Protein Homology CDS 25283 26902 . + 0 ID=cds-WP_075672589.1;Parent=gene-L2557_RS03145;Dbxref=GenBank:WP_075672589.1;Name=WP_075672589.1;Ontology_term=GO:0006094,GO:0004612;gbkey=CDS;gene=pckA;go_function=phosphoenolpyruvate carboxykinase (ATP) activity|0004612||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246655.1;locus_tag=L2557_RS03145;product=phosphoenolpyruvate carboxykinase (ATP);protein_id=WP_075672589.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 27094 27795 . - . ID=gene-L2557_RS03150;Name=L2557_RS03150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03150 NZ_JAIKUA010000030.1 Protein Homology CDS 27094 27795 . - 0 ID=cds-WP_023583128.1;Parent=gene-L2557_RS03150;Dbxref=GenBank:WP_023583128.1;Name=WP_023583128.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249849.1;locus_tag=L2557_RS03150;product=pirin family protein;protein_id=WP_023583128.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 28396 29613 . - . ID=gene-L2557_RS03155;Name=L2557_RS03155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03155 NZ_JAIKUA010000030.1 Protein Homology CDS 28396 29613 . - 0 ID=cds-WP_075672588.1;Parent=gene-L2557_RS03155;Dbxref=GenBank:WP_075672588.1;Name=WP_075672588.1;Ontology_term=GO:0016628,GO:0050660,GO:0050661;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors%2C NAD or NADP as acceptor|0016628||IEA,flavin adenine dinucleotide binding|0050660||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185748.1;locus_tag=L2557_RS03155;product=BaiN/RdsA family NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_075672588.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 29923 31422 . + . ID=gene-L2557_RS03160;Name=pitA;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=L2557_RS03160 NZ_JAIKUA010000030.1 Protein Homology CDS 29923 31422 . + 0 ID=cds-WP_075672587.1;Parent=gene-L2557_RS03160;Dbxref=GenBank:WP_075672587.1;Name=WP_075672587.1;Ontology_term=GO:0006817,GO:0016020;gbkey=CDS;gene=pitA;go_component=membrane|0016020||IEA;go_process=phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246659.1;locus_tag=L2557_RS03160;product=inorganic phosphate transporter PitA;protein_id=WP_075672587.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 31490 31822 . - . ID=gene-L2557_RS03165;Name=uspB;gbkey=Gene;gene=uspB;gene_biotype=protein_coding;locus_tag=L2557_RS03165 NZ_JAIKUA010000030.1 Protein Homology CDS 31490 31822 . - 0 ID=cds-WP_099659242.1;Parent=gene-L2557_RS03165;Dbxref=GenBank:WP_099659242.1;Name=WP_099659242.1;gbkey=CDS;gene=uspB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246660.1;locus_tag=L2557_RS03165;product=universal stress protein UspB;protein_id=WP_099659242.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 32229 32660 . + . ID=gene-L2557_RS03170;Name=uspA;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=L2557_RS03170 NZ_JAIKUA010000030.1 Protein Homology CDS 32229 32660 . + 0 ID=cds-WP_023583131.1;Parent=gene-L2557_RS03170;Dbxref=GenBank:WP_023583131.1;Name=WP_023583131.1;gbkey=CDS;gene=uspA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010848402.1;locus_tag=L2557_RS03170;product=universal stress protein UspA;protein_id=WP_023583131.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 32917 34257 . + . ID=gene-L2557_RS03175;Name=gdhA;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=L2557_RS03175 NZ_JAIKUA010000030.1 Protein Homology CDS 32917 34257 . + 0 ID=cds-WP_235409786.1;Parent=gene-L2557_RS03175;Dbxref=GenBank:WP_235409786.1;Name=WP_235409786.1;Ontology_term=GO:0006520,GO:0016639;gbkey=CDS;gene=gdhA;go_function=oxidoreductase activity%2C acting on the CH-NH2 group of donors%2C NAD or NADP as acceptor|0016639||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628608.1;locus_tag=L2557_RS03175;product=NADP-specific glutamate dehydrogenase;protein_id=WP_235409786.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 34334 35080 . - . ID=gene-L2557_RS03180;Name=rsmJ;gbkey=Gene;gene=rsmJ;gene_biotype=protein_coding;locus_tag=L2557_RS03180 NZ_JAIKUA010000030.1 Protein Homology CDS 34334 35080 . - 0 ID=cds-WP_075672584.1;Parent=gene-L2557_RS03180;Dbxref=GenBank:WP_075672584.1;Name=WP_075672584.1;Ontology_term=GO:0031167,GO:0008990;gbkey=CDS;gene=rsmJ;go_function=rRNA (guanine-N2-)-methyltransferase activity|0008990||IEA;go_process=rRNA methylation|0031167||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534419.1;locus_tag=L2557_RS03180;product=16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ;protein_id=WP_075672584.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 35084 37126 . - . ID=gene-L2557_RS03185;Name=prlC;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=L2557_RS03185 NZ_JAIKUA010000030.1 Protein Homology CDS 35084 37126 . - 0 ID=cds-WP_223673779.1;Parent=gene-L2557_RS03185;Dbxref=GenBank:WP_223673779.1;Name=WP_223673779.1;Ontology_term=GO:0006508,GO:0004222;gbkey=CDS;gene=prlC;go_function=metalloendopeptidase activity|0004222||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368587.1;locus_tag=L2557_RS03185;product=oligopeptidase A;protein_id=WP_223673779.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 37368 37462 . + . ID=gene-L2557_RS03190;Name=L2557_RS03190;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS03190 NZ_JAIKUA010000030.1 tRNAscan-SE tRNA 37368 37462 . + . ID=rna-L2557_RS03190;Parent=gene-L2557_RS03190;anticodon=(pos:37402..37404);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS03190;product=tRNA-Sec NZ_JAIKUA010000030.1 tRNAscan-SE exon 37368 37462 . + . ID=exon-L2557_RS03190-1;Parent=rna-L2557_RS03190;anticodon=(pos:37402..37404);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS03190;product=tRNA-Sec NZ_JAIKUA010000030.1 RefSeq gene 37751 38113 . - . ID=gene-L2557_RS03195;Name=L2557_RS03195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03195 NZ_JAIKUA010000030.1 Protein Homology CDS 37751 38113 . - 0 ID=cds-WP_075672582.1;Parent=gene-L2557_RS03195;Dbxref=GenBank:WP_075672582.1;Name=WP_075672582.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000665680.1;locus_tag=L2557_RS03195;product=YibL family ribosome-associated protein;protein_id=WP_075672582.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 38219 38566 . - . ID=gene-L2557_RS03200;Name=yajD;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=L2557_RS03200 NZ_JAIKUA010000030.1 Protein Homology CDS 38219 38566 . - 0 ID=cds-WP_006534437.1;Parent=gene-L2557_RS03200;Dbxref=GenBank:WP_006534437.1;Name=WP_006534437.1;gbkey=CDS;gene=yajD;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308490.1;locus_tag=L2557_RS03200;product=HNH nuclease YajD;protein_id=WP_006534437.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 38752 39285 . + . ID=gene-L2557_RS03205;Name=L2557_RS03205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03205 NZ_JAIKUA010000030.1 Protein Homology CDS 38752 39285 . + 0 ID=cds-WP_075672581.1;Parent=gene-L2557_RS03205;Dbxref=GenBank:WP_075672581.1;Name=WP_075672581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_463057.1;locus_tag=L2557_RS03205;product=DUF2058 domain-containing protein;protein_id=WP_075672581.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 39393 39869 . + . ID=gene-L2557_RS03210;Name=L2557_RS03210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03210 NZ_JAIKUA010000030.1 Protein Homology CDS 39393 39869 . + 0 ID=cds-WP_164530208.1;Parent=gene-L2557_RS03210;Dbxref=GenBank:WP_164530208.1;Name=WP_164530208.1;Ontology_term=GO:0003676;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003021353.1;locus_tag=L2557_RS03210;product=cold-shock protein;protein_id=WP_164530208.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 39880 40596 . - . ID=gene-L2557_RS03215;Name=L2557_RS03215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03215 NZ_JAIKUA010000030.1 Protein Homology CDS 39880 40596 . - 0 ID=cds-WP_099659240.1;Parent=gene-L2557_RS03215;Dbxref=GenBank:WP_099659240.1;Name=WP_099659240.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014541895.1;locus_tag=L2557_RS03215;product=RluA family pseudouridine synthase;protein_id=WP_099659240.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 40722 40967 . + . ID=gene-L2557_RS03220;Name=L2557_RS03220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03220 NZ_JAIKUA010000030.1 Protein Homology CDS 40722 40967 . + 0 ID=cds-WP_075672579.1;Parent=gene-L2557_RS03220;Dbxref=GenBank:WP_075672579.1;Name=WP_075672579.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005127954.1;locus_tag=L2557_RS03220;product=DUF2543 family protein;protein_id=WP_075672579.1;transl_table=11 NZ_JAIKUA010000030.1 RefSeq gene 41167 41907 . + . ID=gene-L2557_RS03225;Name=L2557_RS03225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03225 NZ_JAIKUA010000030.1 Protein Homology CDS 41167 41907 . + 0 ID=cds-WP_075672578.1;Parent=gene-L2557_RS03225;Dbxref=GenBank:WP_075672578.1;Name=WP_075672578.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658526.1;locus_tag=L2557_RS03225;product=MurR/RpiR family transcriptional regulator;protein_id=WP_075672578.1;transl_table=11 ##sequence-region NZ_JAIKUA010000300.1 1 9845 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000300.1 RefSeq region 1 9845 . + . ID=NZ_JAIKUA010000300.1:1..9845;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000300.1 RefSeq gene 105 2903 . + . ID=gene-L2557_RS16325;Name=polA;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=L2557_RS16325 NZ_JAIKUA010000300.1 Protein Homology CDS 105 2903 . + 0 ID=cds-WP_235410209.1;Parent=gene-L2557_RS16325;Dbxref=GenBank:WP_235410209.1;Name=WP_235410209.1;Ontology_term=GO:0006261,GO:0003676,GO:0003677,GO:0003887,GO:0008408;gbkey=CDS;gene=polA;go_function=nucleic acid binding|0003676||IEA,DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA-templated DNA replication|0006261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912896.1;locus_tag=L2557_RS16325;product=DNA polymerase I;protein_id=WP_235410209.1;transl_table=11 NZ_JAIKUA010000300.1 RefSeq gene 2958 3416 . - . ID=gene-L2557_RS16330;Name=L2557_RS16330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16330 NZ_JAIKUA010000300.1 GeneMarkS-2+ CDS 2958 3416 . - 0 ID=cds-WP_196576348.1;Parent=gene-L2557_RS16330;Dbxref=GenBank:WP_196576348.1;Name=WP_196576348.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS16330;product=hypothetical protein;protein_id=WP_196576348.1;transl_table=11 NZ_JAIKUA010000300.1 RefSeq gene 3588 4106 . - . ID=gene-L2557_RS16335;Name=def;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=L2557_RS16335 NZ_JAIKUA010000300.1 Protein Homology CDS 3588 4106 . - 0 ID=cds-WP_075673328.1;Parent=gene-L2557_RS16335;Dbxref=GenBank:WP_075673328.1;Name=WP_075673328.1;Ontology_term=GO:0036211,GO:0042586;gbkey=CDS;gene=def;go_function=peptide deformylase activity|0042586||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246867.1;locus_tag=L2557_RS16335;product=peptide deformylase;protein_id=WP_075673328.1;transl_table=11 NZ_JAIKUA010000300.1 RefSeq gene 4393 4440 . + . ID=gene-L2557_RS18015;Name=spfP;gbkey=Gene;gene=spfP;gene_biotype=protein_coding;locus_tag=L2557_RS18015 NZ_JAIKUA010000300.1 Protein Homology CDS 4393 4440 . + 0 ID=cds-WP_438361642.1;Parent=gene-L2557_RS18015;Dbxref=GenBank:WP_438361642.1;Name=WP_438361642.1;gbkey=CDS;gene=spfP;inference=COORDINATES: similar to AA sequence:RefSeq:YP_013606034.1;locus_tag=L2557_RS18015;product=small protein SpfP;protein_id=WP_438361642.1;transl_table=11 NZ_JAIKUA010000300.1 RefSeq gene 4591 5223 . - . ID=gene-L2557_RS16340;Name=yihA;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=L2557_RS16340 NZ_JAIKUA010000300.1 Protein Homology CDS 4591 5223 . - 0 ID=cds-WP_075673327.1;Parent=gene-L2557_RS16340;Dbxref=GenBank:WP_075673327.1;Name=WP_075673327.1;Ontology_term=GO:0042254,GO:0003924,GO:0005525,GO:0043022,GO:0005737;gbkey=CDS;gene=yihA;go_component=cytoplasm|0005737||IEA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA,ribosome binding|0043022||IEA;go_process=ribosome biogenesis|0042254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012850295.1;locus_tag=L2557_RS16340;product=ribosome biogenesis GTP-binding protein YihA/YsxC;protein_id=WP_075673327.1;transl_table=11 NZ_JAIKUA010000300.1 RefSeq gene 5494 6063 . + . ID=gene-L2557_RS16345;Name=ppiA;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;gene_synonym=rotA;locus_tag=L2557_RS16345 NZ_JAIKUA010000300.1 Protein Homology CDS 5494 6063 . + 0 ID=cds-WP_072064793.1;Parent=gene-L2557_RS16345;Dbxref=GenBank:WP_072064793.1;Name=WP_072064793.1;gbkey=CDS;gene=ppiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246869.1;locus_tag=L2557_RS16345;product=peptidylprolyl isomerase A;protein_id=WP_072064793.1;transl_table=11 NZ_JAIKUA010000300.1 RefSeq gene 6438 7013 . + . ID=gene-L2557_RS16350;Name=L2557_RS16350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16350 NZ_JAIKUA010000300.1 Protein Homology CDS 6438 7013 . + 0 ID=cds-WP_036933913.1;Parent=gene-L2557_RS16350;Dbxref=GenBank:WP_036933913.1;Name=WP_036933913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262565.1;locus_tag=L2557_RS16350;product=aminodeoxychorismate synthase component II;protein_id=WP_036933913.1;transl_table=11 NZ_JAIKUA010000300.1 RefSeq gene 7131 8345 . + . ID=gene-L2557_RS16355;Name=argD;gbkey=Gene;gene=argD;gene_biotype=protein_coding;gene_synonym=dapC;locus_tag=L2557_RS16355 NZ_JAIKUA010000300.1 Protein Homology CDS 7131 8345 . + 0 ID=cds-WP_156734282.1;Parent=gene-L2557_RS16355;Dbxref=GenBank:WP_156734282.1;Name=WP_156734282.1;gbkey=CDS;gene=argD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250076.1;locus_tag=L2557_RS16355;product=bifunctional acetylornithine/succinyldiaminopimelate transaminase;protein_id=WP_156734282.1;transl_table=11 NZ_JAIKUA010000300.1 RefSeq gene 8441 9073 . - . ID=gene-L2557_RS16360;Name=crp;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=L2557_RS16360 NZ_JAIKUA010000300.1 Protein Homology CDS 8441 9073 . - 0 ID=cds-WP_004246872.1;Parent=gene-L2557_RS16360;Dbxref=GenBank:WP_004246872.1;Name=WP_004246872.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=crp;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016506431.1;locus_tag=L2557_RS16360;product=cAMP-activated global transcriptional regulator CRP;protein_id=WP_004246872.1;transl_table=11 NZ_JAIKUA010000300.1 RefSeq gene 9387 9794 . + . ID=gene-L2557_RS16365;Name=L2557_RS16365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16365 NZ_JAIKUA010000300.1 Protein Homology CDS 9387 9794 . + 0 ID=cds-WP_075673325.1;Parent=gene-L2557_RS16365;Dbxref=GenBank:WP_075673325.1;Name=WP_075673325.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534663.1;locus_tag=L2557_RS16365;product=OsmC family protein;protein_id=WP_075673325.1;transl_table=11 ##sequence-region NZ_JAIKUA010000301.1 1 3222 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000301.1 RefSeq region 1 3222 . + . ID=NZ_JAIKUA010000301.1:1..3222;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000301.1 RefSeq gene 141 719 . + . ID=gene-L2557_RS16370;Name=L2557_RS16370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16370 NZ_JAIKUA010000301.1 Protein Homology CDS 141 719 . + 0 ID=cds-WP_075674376.1;Parent=gene-L2557_RS16370;Dbxref=GenBank:WP_075674376.1;Name=WP_075674376.1;Ontology_term=GO:0009691,GO:0016799;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;go_process=cytokinin biosynthetic process|0009691||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537557.1;locus_tag=L2557_RS16370;product=LOG family protein;protein_id=WP_075674376.1;transl_table=11 NZ_JAIKUA010000301.1 RefSeq gene 729 1193 . + . ID=gene-L2557_RS16375;Name=L2557_RS16375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16375 NZ_JAIKUA010000301.1 Protein Homology CDS 729 1193 . + 0 ID=cds-WP_075674377.1;Parent=gene-L2557_RS16375;Dbxref=GenBank:WP_075674377.1;Name=WP_075674377.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244499.1;locus_tag=L2557_RS16375;product=GNAT family N-acetyltransferase;protein_id=WP_075674377.1;transl_table=11 NZ_JAIKUA010000301.1 RefSeq gene 1283 2983 . - . ID=gene-L2557_RS16380;Name=L2557_RS16380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16380 NZ_JAIKUA010000301.1 Protein Homology CDS 1283 2983 . - 0 ID=cds-WP_099659800.1;Parent=gene-L2557_RS16380;Dbxref=GenBank:WP_099659800.1;Name=WP_099659800.1;Ontology_term=GO:0016810,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247580.1;locus_tag=L2557_RS16380;product=amidohydrolase;protein_id=WP_099659800.1;transl_table=11 ##sequence-region NZ_JAIKUA010000302.1 1 393 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000302.1 RefSeq region 1 393 . + . ID=NZ_JAIKUA010000302.1:1..393;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000302.1 RefSeq gene 1 393 . + . ID=gene-L2557_RS16385;Name=L2557_RS16385;end_range=393,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16385;partial=true;start_range=.,1 NZ_JAIKUA010000302.1 GeneMarkS-2+ CDS 1 393 . + 0 ID=cds-WP_235410210.1;Parent=gene-L2557_RS16385;Dbxref=GenBank:WP_235410210.1;Name=WP_235410210.1;end_range=393,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS16385;partial=true;product=hypothetical protein;protein_id=WP_235410210.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000303.1 1 318 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000303.1 RefSeq region 1 318 . + . ID=NZ_JAIKUA010000303.1:1..318;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000303.1 RefSeq pseudogene 1 318 . + . ID=gene-L2557_RS16390;Name=L2557_RS16390;end_range=318,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS16390;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000303.1 GeneMarkS-2+ CDS 1 318 . + 0 ID=cds-L2557_RS16390;Parent=gene-L2557_RS16390;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=318,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS16390;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000304.1 1 278 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000304.1 RefSeq region 1 278 . + . ID=NZ_JAIKUA010000304.1:1..278;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000304.1 RefSeq gene 1 278 . + . ID=gene-L2557_RS16395;Name=L2557_RS16395;end_range=278,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=L2557_RS16395;partial=true;start_range=.,1 NZ_JAIKUA010000304.1 cmsearch rRNA 1 278 . + . ID=rna-L2557_RS16395;Parent=gene-L2557_RS16395;Dbxref=RFAM:RF02541;end_range=278,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=L2557_RS16395;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JAIKUA010000304.1 cmsearch exon 1 278 . + . ID=exon-L2557_RS16395-1;Parent=rna-L2557_RS16395;Dbxref=RFAM:RF02541;end_range=278,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=L2557_RS16395;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JAIKUA010000305.1 1 744 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000305.1 RefSeq region 1 744 . + . ID=NZ_JAIKUA010000305.1:1..744;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000305.1 RefSeq gene 1 567 . - . ID=gene-L2557_RS16400;Name=L2557_RS16400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16400;partial=true;start_range=.,1 NZ_JAIKUA010000305.1 Protein Homology CDS 1 567 . - 0 ID=cds-WP_235410211.1;Parent=gene-L2557_RS16400;Dbxref=GenBank:WP_235410211.1;Name=WP_235410211.1;Ontology_term=GO:0009061,GO:0008863,GO:0009055,GO:0009326;gbkey=CDS;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246538.1;locus_tag=L2557_RS16400;partial=true;product=formate dehydrogenase subunit gamma;protein_id=WP_235410211.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000305.1 RefSeq gene 564 744 . - . ID=gene-L2557_RS16405;Name=L2557_RS16405;end_range=744,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16405;partial=true NZ_JAIKUA010000305.1 Protein Homology CDS 564 744 . - 1 ID=cds-WP_328253342.1;Parent=gene-L2557_RS16405;Dbxref=GenBank:WP_328253342.1;Name=WP_328253342.1;end_range=744,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534310.1;locus_tag=L2557_RS16405;partial=true;product=formate dehydrogenase N subunit beta transmembrane domain-containing protein;protein_id=WP_328253342.1;transl_table=11 ##sequence-region NZ_JAIKUA010000306.1 1 1404 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000306.1 RefSeq region 1 1404 . + . ID=NZ_JAIKUA010000306.1:1..1404;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000306.1 RefSeq gene 30 515 . - . ID=gene-L2557_RS16410;Name=folA;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=L2557_RS16410 NZ_JAIKUA010000306.1 Protein Homology CDS 30 515 . - 0 ID=cds-WP_099660205.1;Parent=gene-L2557_RS16410;Dbxref=GenBank:WP_099660205.1;Name=WP_099660205.1;Ontology_term=GO:0046654,GO:0004146;gbkey=CDS;gene=folA;go_function=dihydrofolate reductase activity|0004146||IEA;go_process=tetrahydrofolate biosynthetic process|0046654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535980.1;locus_tag=L2557_RS16410;product=type 3 dihydrofolate reductase;protein_id=WP_099660205.1;transl_table=11 NZ_JAIKUA010000306.1 RefSeq gene 691 1305 . + . ID=gene-L2557_RS16415;Name=L2557_RS16415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16415 NZ_JAIKUA010000306.1 Protein Homology CDS 691 1305 . + 0 ID=cds-WP_099660206.1;Parent=gene-L2557_RS16415;Dbxref=GenBank:WP_099660206.1;Name=WP_099660206.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005192983.1;locus_tag=L2557_RS16415;product=LysE family translocator;protein_id=WP_099660206.1;transl_table=11 ##sequence-region NZ_JAIKUA010000307.1 1 1787 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000307.1 RefSeq region 1 1787 . + . ID=NZ_JAIKUA010000307.1:1..1787;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000307.1 RefSeq gene 133 933 . - . ID=gene-L2557_RS16420;Name=L2557_RS16420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16420 NZ_JAIKUA010000307.1 Protein Homology CDS 133 933 . - 0 ID=cds-WP_075672857.1;Parent=gene-L2557_RS16420;Dbxref=GenBank:WP_075672857.1;Name=WP_075672857.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004102954.1;locus_tag=L2557_RS16420;product=MetQ/NlpA family lipoprotein;protein_id=WP_075672857.1;transl_table=11 NZ_JAIKUA010000307.1 RefSeq gene 1152 1685 . - . ID=gene-L2557_RS16425;Name=L2557_RS16425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16425 NZ_JAIKUA010000307.1 Protein Homology CDS 1152 1685 . - 0 ID=cds-WP_075672858.1;Parent=gene-L2557_RS16425;Dbxref=GenBank:WP_075672858.1;Name=WP_075672858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242928.1;locus_tag=L2557_RS16425;product=carbapenem self-resistance protein CarG family protein;protein_id=WP_075672858.1;transl_table=11 ##sequence-region NZ_JAIKUA010000308.1 1 9510 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000308.1 RefSeq region 1 9510 . + . ID=NZ_JAIKUA010000308.1:1..9510;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000308.1 RefSeq gene 148 1404 . - . ID=gene-L2557_RS16430;Name=L2557_RS16430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16430 NZ_JAIKUA010000308.1 Protein Homology CDS 148 1404 . - 0 ID=cds-WP_235410212.1;Parent=gene-L2557_RS16430;Dbxref=GenBank:WP_235410212.1;Name=WP_235410212.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910768.1;locus_tag=L2557_RS16430;product=mechanosensitive ion channel family protein;protein_id=WP_235410212.1;transl_table=11 NZ_JAIKUA010000308.1 RefSeq gene 2005 3627 . + . ID=gene-L2557_RS16435;Name=L2557_RS16435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16435 NZ_JAIKUA010000308.1 Protein Homology CDS 2005 3627 . + 0 ID=cds-WP_075674185.1;Parent=gene-L2557_RS16435;Dbxref=GenBank:WP_075674185.1;Name=WP_075674185.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533253.1;locus_tag=L2557_RS16435;product=hypothetical protein;protein_id=WP_075674185.1;transl_table=11 NZ_JAIKUA010000308.1 RefSeq gene 3719 4297 . - . ID=gene-L2557_RS16440;Name=L2557_RS16440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16440 NZ_JAIKUA010000308.1 Protein Homology CDS 3719 4297 . - 0 ID=cds-WP_075674184.1;Parent=gene-L2557_RS16440;Dbxref=GenBank:WP_075674184.1;Name=WP_075674184.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368080.1;locus_tag=L2557_RS16440;product=HdeD family acid-resistance protein;protein_id=WP_075674184.1;transl_table=11 NZ_JAIKUA010000308.1 RefSeq gene 4491 5345 . + . ID=gene-L2557_RS16445;Name=L2557_RS16445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16445 NZ_JAIKUA010000308.1 Protein Homology CDS 4491 5345 . + 0 ID=cds-WP_075674183.1;Parent=gene-L2557_RS16445;Dbxref=GenBank:WP_075674183.1;Name=WP_075674183.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368079.1;locus_tag=L2557_RS16445;product=D-amino-acid transaminase;protein_id=WP_075674183.1;transl_table=11 NZ_JAIKUA010000308.1 RefSeq gene 5440 6000 . - . ID=gene-L2557_RS16450;Name=L2557_RS16450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16450 NZ_JAIKUA010000308.1 Protein Homology CDS 5440 6000 . - 0 ID=cds-WP_075674182.1;Parent=gene-L2557_RS16450;Dbxref=GenBank:WP_075674182.1;Name=WP_075674182.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250737.1;locus_tag=L2557_RS16450;product=helix-turn-helix domain-containing protein;protein_id=WP_075674182.1;transl_table=11 NZ_JAIKUA010000308.1 RefSeq gene 6086 6748 . + . ID=gene-L2557_RS16455;Name=L2557_RS16455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16455 NZ_JAIKUA010000308.1 Protein Homology CDS 6086 6748 . + 0 ID=cds-WP_075674181.1;Parent=gene-L2557_RS16455;Dbxref=GenBank:WP_075674181.1;Name=WP_075674181.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020,GO:1902495;gbkey=CDS;go_component=membrane|0016020||IEA,transmembrane transporter complex|1902495||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243600.1;locus_tag=L2557_RS16455;product=AzlC family ABC transporter permease;protein_id=WP_075674181.1;transl_table=11 NZ_JAIKUA010000308.1 RefSeq gene 6745 7074 . + . ID=gene-L2557_RS16460;Name=L2557_RS16460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16460 NZ_JAIKUA010000308.1 Protein Homology CDS 6745 7074 . + 0 ID=cds-WP_083629136.1;Parent=gene-L2557_RS16460;Dbxref=GenBank:WP_083629136.1;Name=WP_083629136.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250741.1;locus_tag=L2557_RS16460;product=AzlD domain-containing protein;protein_id=WP_083629136.1;transl_table=11 NZ_JAIKUA010000308.1 RefSeq gene 7157 8560 . - . ID=gene-L2557_RS16465;Name=L2557_RS16465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16465 NZ_JAIKUA010000308.1 Protein Homology CDS 7157 8560 . - 0 ID=cds-WP_235410213.1;Parent=gene-L2557_RS16465;Dbxref=GenBank:WP_235410213.1;Name=WP_235410213.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368077.1;locus_tag=L2557_RS16465;product=ATP-binding protein;protein_id=WP_235410213.1;transl_table=11 NZ_JAIKUA010000308.1 RefSeq gene 8561 9226 . - . ID=gene-L2557_RS16470;Name=L2557_RS16470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16470 NZ_JAIKUA010000308.1 Protein Homology CDS 8561 9226 . - 0 ID=cds-WP_075674178.1;Parent=gene-L2557_RS16470;Dbxref=GenBank:WP_075674178.1;Name=WP_075674178.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243597.1;locus_tag=L2557_RS16470;product=response regulator;protein_id=WP_075674178.1;transl_table=11 ##sequence-region NZ_JAIKUA010000309.1 1 2111 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000309.1 RefSeq region 1 2111 . + . ID=NZ_JAIKUA010000309.1:1..2111;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000309.1 RefSeq gene 1 701 . - . ID=gene-L2557_RS16475;Name=allS;gbkey=Gene;gene=allS;gene_biotype=protein_coding;locus_tag=L2557_RS16475;partial=true;start_range=.,1 NZ_JAIKUA010000309.1 Protein Homology CDS 1 701 . - 0 ID=cds-WP_235410214.1;Parent=gene-L2557_RS16475;Dbxref=GenBank:WP_235410214.1;Name=WP_235410214.1;gbkey=CDS;gene=allS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534047.1;locus_tag=L2557_RS16475;partial=true;product=HTH-type transcriptional activator AllS;protein_id=WP_235410214.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000309.1 RefSeq gene 1070 1891 . - . ID=gene-L2557_RS16480;Name=L2557_RS16480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16480 NZ_JAIKUA010000309.1 Protein Homology CDS 1070 1891 . - 0 ID=cds-WP_075673297.1;Parent=gene-L2557_RS16480;Dbxref=GenBank:WP_075673297.1;Name=WP_075673297.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244294.1;locus_tag=L2557_RS16480;product=CPBP family intramembrane glutamic endopeptidase;protein_id=WP_075673297.1;transl_table=11 ##sequence-region NZ_JAIKUA010000031.1 1 13510 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000031.1 RefSeq region 1 13510 . + . ID=NZ_JAIKUA010000031.1:1..13510;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000031.1 RefSeq gene 1 1154 . + . ID=gene-L2557_RS03230;Name=L2557_RS03230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03230;partial=true;start_range=.,1 NZ_JAIKUA010000031.1 Protein Homology CDS 1 1154 . + 2 ID=cds-WP_235409787.1;Parent=gene-L2557_RS03230;Dbxref=GenBank:WP_235409787.1;Name=WP_235409787.1;Ontology_term=GO:0006304,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: protein motif:HMM:NF013579.6;locus_tag=L2557_RS03230;partial=true;product=restriction endonuclease subunit S;protein_id=WP_235409787.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000031.1 RefSeq gene 1685 2713 . - . ID=gene-L2557_RS03235;Name=L2557_RS03235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03235 NZ_JAIKUA010000031.1 Protein Homology CDS 1685 2713 . - 0 ID=cds-WP_235409792.1;Parent=gene-L2557_RS03235;Dbxref=GenBank:WP_235409792.1;Name=WP_235409792.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536701.1;locus_tag=L2557_RS03235;product=phage portal protein;protein_id=WP_235409792.1;transl_table=11 NZ_JAIKUA010000031.1 RefSeq gene 2713 4467 . - . ID=gene-L2557_RS03240;Name=L2557_RS03240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03240 NZ_JAIKUA010000031.1 Protein Homology CDS 2713 4467 . - 0 ID=cds-WP_235409794.1;Parent=gene-L2557_RS03240;Dbxref=GenBank:WP_235409794.1;Name=WP_235409794.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536702.1;locus_tag=L2557_RS03240;product=terminase ATPase subunit family protein;protein_id=WP_235409794.1;transl_table=11 NZ_JAIKUA010000031.1 RefSeq gene 4642 5451 . + . ID=gene-L2557_RS03245;Name=L2557_RS03245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03245 NZ_JAIKUA010000031.1 Protein Homology CDS 4642 5451 . + 0 ID=cds-WP_235409795.1;Parent=gene-L2557_RS03245;Dbxref=GenBank:WP_235409795.1;Name=WP_235409795.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368199.1;locus_tag=L2557_RS03245;product=GPO family capsid scaffolding protein;protein_id=WP_235409795.1;transl_table=11 NZ_JAIKUA010000031.1 RefSeq gene 5467 6585 . + . ID=gene-L2557_RS03250;Name=L2557_RS03250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03250 NZ_JAIKUA010000031.1 Protein Homology CDS 5467 6585 . + 0 ID=cds-WP_235409797.1;Parent=gene-L2557_RS03250;Dbxref=GenBank:WP_235409797.1;Name=WP_235409797.1;Ontology_term=GO:0019069,GO:0005198,GO:0019028;gbkey=CDS;go_component=viral capsid|0019028||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368198.1;locus_tag=L2557_RS03250;product=phage major capsid protein%2C P2 family;protein_id=WP_235409797.1;transl_table=11 NZ_JAIKUA010000031.1 RefSeq gene 6585 7256 . + . ID=gene-L2557_RS03255;Name=gpM;gbkey=Gene;gene=gpM;gene_biotype=protein_coding;locus_tag=L2557_RS03255 NZ_JAIKUA010000031.1 Protein Homology CDS 6585 7256 . + 0 ID=cds-WP_235409799.1;Parent=gene-L2557_RS03255;Dbxref=GenBank:WP_235409799.1;Name=WP_235409799.1;Ontology_term=GO:0019069,GO:0003677,GO:0004519;gbkey=CDS;gene=gpM;go_function=DNA binding|0003677||IEA,endonuclease activity|0004519||IEA;go_process=viral capsid assembly|0019069||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368197.1;locus_tag=L2557_RS03255;product=phage terminase small subunit;protein_id=WP_235409799.1;transl_table=11 NZ_JAIKUA010000031.1 RefSeq gene 7331 7786 . + . ID=gene-L2557_RS03260;Name=L2557_RS03260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03260 NZ_JAIKUA010000031.1 Protein Homology CDS 7331 7786 . + 0 ID=cds-WP_235409802.1;Parent=gene-L2557_RS03260;Dbxref=GenBank:WP_235409802.1;Name=WP_235409802.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368196.1;locus_tag=L2557_RS03260;product=head completion/stabilization protein;protein_id=WP_235409802.1;transl_table=11 NZ_JAIKUA010000031.1 RefSeq gene 7786 7992 . + . ID=gene-L2557_RS03265;Name=L2557_RS03265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03265 NZ_JAIKUA010000031.1 Protein Homology CDS 7786 7992 . + 0 ID=cds-WP_235409804.1;Parent=gene-L2557_RS03265;Dbxref=GenBank:WP_235409804.1;Name=WP_235409804.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536706.1;locus_tag=L2557_RS03265;product=tail protein X;protein_id=WP_235409804.1;transl_table=11 NZ_JAIKUA010000031.1 RefSeq gene 8012 8326 . + . ID=gene-L2557_RS03270;Name=L2557_RS03270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03270 NZ_JAIKUA010000031.1 Protein Homology CDS 8012 8326 . + 0 ID=cds-WP_109397508.1;Parent=gene-L2557_RS03270;Dbxref=GenBank:WP_109397508.1;Name=WP_109397508.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536707.1;locus_tag=L2557_RS03270;product=phage holin family protein;protein_id=WP_109397508.1;transl_table=11 NZ_JAIKUA010000031.1 RefSeq gene 8313 8723 . + . ID=gene-L2557_RS03275;Name=L2557_RS03275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03275 NZ_JAIKUA010000031.1 Protein Homology CDS 8313 8723 . + 0 ID=cds-WP_235409806.1;Parent=gene-L2557_RS03275;Dbxref=GenBank:WP_235409806.1;Name=WP_235409806.1;Ontology_term=GO:0071554,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=cell wall organization or biogenesis|0071554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001194317.1;locus_tag=L2557_RS03275;product=M15 family metallopeptidase;protein_id=WP_235409806.1;transl_table=11 NZ_JAIKUA010000031.1 RefSeq gene 8720 9235 . + . ID=gene-L2557_RS03280;Name=L2557_RS03280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03280 NZ_JAIKUA010000031.1 Protein Homology CDS 8720 9235 . + 0 ID=cds-WP_235409807.1;Parent=gene-L2557_RS03280;Dbxref=GenBank:WP_235409807.1;Name=WP_235409807.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015218.6;locus_tag=L2557_RS03280;product=lysis protein;protein_id=WP_235409807.1;transl_table=11 NZ_JAIKUA010000031.1 RefSeq gene 9198 9635 . + . ID=gene-L2557_RS03285;Name=L2557_RS03285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03285 NZ_JAIKUA010000031.1 Protein Homology CDS 9198 9635 . + 0 ID=cds-WP_235409808.1;Parent=gene-L2557_RS03285;Dbxref=GenBank:WP_235409808.1;Name=WP_235409808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368191.1;locus_tag=L2557_RS03285;product=phage tail protein;protein_id=WP_235409808.1;transl_table=11 NZ_JAIKUA010000031.1 RefSeq gene 9625 10260 . + . ID=gene-L2557_RS03290;Name=L2557_RS03290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03290 NZ_JAIKUA010000031.1 Protein Homology CDS 9625 10260 . + 0 ID=cds-WP_235409810.1;Parent=gene-L2557_RS03290;Dbxref=GenBank:WP_235409810.1;Name=WP_235409810.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368190.1;locus_tag=L2557_RS03290;product=phage virion morphogenesis protein;protein_id=WP_235409810.1;transl_table=11 NZ_JAIKUA010000031.1 RefSeq gene 10326 10952 . + . ID=gene-L2557_RS03295;Name=L2557_RS03295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03295 NZ_JAIKUA010000031.1 Protein Homology CDS 10326 10952 . + 0 ID=cds-WP_235409812.1;Parent=gene-L2557_RS03295;Dbxref=GenBank:WP_235409812.1;Name=WP_235409812.1;Ontology_term=GO:0098003,GO:0046872,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_function=metal ion binding|0046872||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536714.1;locus_tag=L2557_RS03295;product=phage baseplate assembly protein V;protein_id=WP_235409812.1;transl_table=11 NZ_JAIKUA010000031.1 RefSeq gene 10949 11287 . + . ID=gene-L2557_RS03300;Name=L2557_RS03300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03300 NZ_JAIKUA010000031.1 Protein Homology CDS 10949 11287 . + 0 ID=cds-WP_235409813.1;Parent=gene-L2557_RS03300;Dbxref=GenBank:WP_235409813.1;Name=WP_235409813.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006813035.1;locus_tag=L2557_RS03300;product=GPW/gp25 family protein;protein_id=WP_235409813.1;transl_table=11 NZ_JAIKUA010000031.1 RefSeq gene 11289 12197 . + . ID=gene-L2557_RS03305;Name=L2557_RS03305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03305 NZ_JAIKUA010000031.1 Protein Homology CDS 11289 12197 . + 0 ID=cds-WP_159363700.1;Parent=gene-L2557_RS03305;Dbxref=GenBank:WP_159363700.1;Name=WP_159363700.1;Ontology_term=GO:0098045,GO:0098025;gbkey=CDS;go_component=virus tail%2C baseplate|0098025||IEA;go_process=virus baseplate assembly|0098045||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368187.1;locus_tag=L2557_RS03305;product=baseplate assembly protein;protein_id=WP_159363700.1;transl_table=11 NZ_JAIKUA010000031.1 RefSeq gene 12190 12801 . + . ID=gene-L2557_RS03310;Name=L2557_RS03310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03310 NZ_JAIKUA010000031.1 Protein Homology CDS 12190 12801 . + 0 ID=cds-WP_235409814.1;Parent=gene-L2557_RS03310;Dbxref=GenBank:WP_235409814.1;Name=WP_235409814.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368186.1;locus_tag=L2557_RS03310;product=phage tail protein I;protein_id=WP_235409814.1;transl_table=11 NZ_JAIKUA010000031.1 RefSeq gene 12791 13510 . + . ID=gene-L2557_RS03315;Name=L2557_RS03315;end_range=13510,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03315;partial=true NZ_JAIKUA010000031.1 Protein Homology CDS 12791 13510 . + 0 ID=cds-WP_235409816.1;Parent=gene-L2557_RS03315;Dbxref=GenBank:WP_235409816.1;Name=WP_235409816.1;Ontology_term=GO:0098024;end_range=13510,.;gbkey=CDS;go_component=virus tail%2C fiber|0098024||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536718.1;locus_tag=L2557_RS03315;partial=true;product=phage tail protein;protein_id=WP_235409816.1;transl_table=11 ##sequence-region NZ_JAIKUA010000310.1 1 3148 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000310.1 RefSeq region 1 3148 . + . ID=NZ_JAIKUA010000310.1:1..3148;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000310.1 RefSeq gene 88 717 . - . ID=gene-L2557_RS16485;Name=L2557_RS16485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16485 NZ_JAIKUA010000310.1 Protein Homology CDS 88 717 . - 0 ID=cds-WP_099660631.1;Parent=gene-L2557_RS16485;Dbxref=GenBank:WP_099660631.1;Name=WP_099660631.1;Ontology_term=GO:0046677,GO:0016746;gbkey=CDS;go_function=acyltransferase activity|0016746||IEA;go_process=response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533243.1;locus_tag=L2557_RS16485;product=CatB-related O-acetyltransferase;protein_id=WP_099660631.1;transl_table=11 NZ_JAIKUA010000310.1 RefSeq gene 974 2065 . - . ID=gene-L2557_RS16490;Name=L2557_RS16490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16490 NZ_JAIKUA010000310.1 Protein Homology CDS 974 2065 . - 0 ID=cds-WP_075674362.1;Parent=gene-L2557_RS16490;Dbxref=GenBank:WP_075674362.1;Name=WP_075674362.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250747.1;locus_tag=L2557_RS16490;product=NADH:flavin oxidoreductase/NADH oxidase;protein_id=WP_075674362.1;transl_table=11 NZ_JAIKUA010000310.1 RefSeq gene 2238 2516 . - . ID=gene-L2557_RS16495;Name=L2557_RS16495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16495 NZ_JAIKUA010000310.1 Protein Homology CDS 2238 2516 . - 0 ID=cds-WP_075674363.1;Parent=gene-L2557_RS16495;Dbxref=GenBank:WP_075674363.1;Name=WP_075674363.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368076.1;locus_tag=L2557_RS16495;product=DUF2798 domain-containing protein;protein_id=WP_075674363.1;transl_table=11 NZ_JAIKUA010000310.1 RefSeq gene 2759 3097 . - . ID=gene-L2557_RS16500;Name=L2557_RS16500;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16500 NZ_JAIKUA010000310.1 Protein Homology CDS 2759 3097 . - 0 ID=cds-WP_109420335.1;Parent=gene-L2557_RS16500;Dbxref=GenBank:WP_109420335.1;Name=WP_109420335.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004234675.1;locus_tag=L2557_RS16500;product=DUF5713 family protein;protein_id=WP_109420335.1;transl_table=11 ##sequence-region NZ_JAIKUA010000311.1 1 232 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000311.1 RefSeq region 1 232 . + . ID=NZ_JAIKUA010000311.1:1..232;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000311.1 RefSeq gene 1 221 . - . ID=gene-L2557_RS16505;Name=hscB;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=L2557_RS16505;partial=true;start_range=.,1 NZ_JAIKUA010000311.1 Protein Homology CDS 1 221 . - 0 ID=cds-WP_235410215.1;Parent=gene-L2557_RS16505;Dbxref=GenBank:WP_235410215.1;Name=WP_235410215.1;Ontology_term=GO:0044571,GO:0001671,GO:0051087;gbkey=CDS;gene=hscB;go_function=ATPase activator activity|0001671||IEA,protein-folding chaperone binding|0051087||IEA;go_process=[2Fe-2S] cluster assembly|0044571||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243844.1;locus_tag=L2557_RS16505;partial=true;product=Fe-S protein assembly co-chaperone HscB;protein_id=WP_235410215.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000312.1 1 5798 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000312.1 RefSeq region 1 5798 . + . ID=NZ_JAIKUA010000312.1:1..5798;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000312.1 RefSeq gene 654 2180 . + . ID=gene-L2557_RS16510;Name=L2557_RS16510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16510 NZ_JAIKUA010000312.1 Protein Homology CDS 654 2180 . + 0 ID=cds-WP_099659344.1;Parent=gene-L2557_RS16510;Dbxref=GenBank:WP_099659344.1;Name=WP_099659344.1;Ontology_term=GO:0015727,GO:0015129,GO:0015295,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=lactate transmembrane transporter activity|0015129||IEA,solute:proton symporter activity|0015295||IEA;go_process=lactate transport|0015727||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243961.1;locus_tag=L2557_RS16510;product=L-lactate permease;protein_id=WP_099659344.1;transl_table=11 NZ_JAIKUA010000312.1 RefSeq gene 2300 3019 . + . ID=gene-L2557_RS16515;Name=L2557_RS16515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16515 NZ_JAIKUA010000312.1 Protein Homology CDS 2300 3019 . + 0 ID=cds-WP_099659343.1;Parent=gene-L2557_RS16515;Dbxref=GenBank:WP_099659343.1;Name=WP_099659343.1;Ontology_term=GO:0016491,GO:0046872,GO:0051536;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001102087.1;locus_tag=L2557_RS16515;product=(Fe-S)-binding protein;protein_id=WP_099659343.1;transl_table=11 NZ_JAIKUA010000312.1 RefSeq gene 3032 4453 . + . ID=gene-L2557_RS16520;Name=L2557_RS16520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16520 NZ_JAIKUA010000312.1 Protein Homology CDS 3032 4453 . + 0 ID=cds-WP_075670932.1;Parent=gene-L2557_RS16520;Dbxref=GenBank:WP_075670932.1;Name=WP_075670932.1;Ontology_term=GO:0006089,GO:0051536;gbkey=CDS;go_function=iron-sulfur cluster binding|0051536||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243964.1;locus_tag=L2557_RS16520;product=LutB/LldF family L-lactate oxidation iron-sulfur protein;protein_id=WP_075670932.1;transl_table=11 NZ_JAIKUA010000312.1 RefSeq gene 4455 5159 . + . ID=gene-L2557_RS16525;Name=L2557_RS16525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16525 NZ_JAIKUA010000312.1 Protein Homology CDS 4455 5159 . + 0 ID=cds-WP_075670930.1;Parent=gene-L2557_RS16525;Dbxref=GenBank:WP_075670930.1;Name=WP_075670930.1;Ontology_term=GO:0006089;gbkey=CDS;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250409.1;locus_tag=L2557_RS16525;product=LutC/YkgG family protein;protein_id=WP_075670930.1;transl_table=11 NZ_JAIKUA010000312.1 RefSeq gene 5283 5687 . - . ID=gene-L2557_RS16530;Name=umoC;gbkey=Gene;gene=umoC;gene_biotype=protein_coding;locus_tag=L2557_RS16530 NZ_JAIKUA010000312.1 Protein Homology CDS 5283 5687 . - 0 ID=cds-WP_075670928.1;Parent=gene-L2557_RS16530;Dbxref=GenBank:WP_075670928.1;Name=WP_075670928.1;gbkey=CDS;gene=umoC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368164.1;locus_tag=L2557_RS16530;product=lysozyme inhibitor LprI family protein;protein_id=WP_075670928.1;transl_table=11 ##sequence-region NZ_JAIKUA010000313.1 1 1656 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000313.1 RefSeq region 1 1656 . + . ID=NZ_JAIKUA010000313.1:1..1656;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000313.1 RefSeq gene 191 1656 . + . ID=gene-L2557_RS16535;Name=L2557_RS16535;end_range=1656,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16535;partial=true NZ_JAIKUA010000313.1 Protein Homology CDS 191 1656 . + 0 ID=cds-WP_235410216.1;Parent=gene-L2557_RS16535;Dbxref=GenBank:WP_235410216.1;Name=WP_235410216.1;Ontology_term=GO:0007165,GO:0016020;end_range=1656,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249116.1;locus_tag=L2557_RS16535;partial=true;product=methyl-accepting chemotaxis protein;protein_id=WP_235410216.1;transl_table=11 ##sequence-region NZ_JAIKUA010000314.1 1 4099 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000314.1 RefSeq region 1 4099 . + . ID=NZ_JAIKUA010000314.1:1..4099;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000314.1 RefSeq gene 67 142 . + . ID=gene-L2557_RS16540;Name=L2557_RS16540;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS16540 NZ_JAIKUA010000314.1 tRNAscan-SE tRNA 67 142 . + . ID=rna-L2557_RS16540;Parent=gene-L2557_RS16540;anticodon=(pos:100..102);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS16540;product=tRNA-Thr NZ_JAIKUA010000314.1 tRNAscan-SE exon 67 142 . + . ID=exon-L2557_RS16540-1;Parent=rna-L2557_RS16540;anticodon=(pos:100..102);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS16540;product=tRNA-Thr NZ_JAIKUA010000314.1 RefSeq gene 194 309 . + . ID=gene-L2557_RS16545;Name=rrf;gbkey=Gene;gene=rrf;gene_biotype=rRNA;locus_tag=L2557_RS16545 NZ_JAIKUA010000314.1 cmsearch rRNA 194 309 . + . ID=rna-L2557_RS16545;Parent=gene-L2557_RS16545;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=L2557_RS16545;product=5S ribosomal RNA NZ_JAIKUA010000314.1 cmsearch exon 194 309 . + . ID=exon-L2557_RS16545-1;Parent=rna-L2557_RS16545;Dbxref=RFAM:RF00001;gbkey=rRNA;gene=rrf;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=L2557_RS16545;product=5S ribosomal RNA NZ_JAIKUA010000314.1 RefSeq gene 472 1506 . + . ID=gene-L2557_RS16550;Name=murB;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=L2557_RS16550 NZ_JAIKUA010000314.1 Protein Homology CDS 472 1506 . + 0 ID=cds-WP_075674346.1;Parent=gene-L2557_RS16550;Dbxref=GenBank:WP_075674346.1;Name=WP_075674346.1;Ontology_term=GO:0008762,GO:0071949;gbkey=CDS;gene=murB;go_function=UDP-N-acetylmuramate dehydrogenase activity|0008762||IEA,FAD binding|0071949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246973.1;locus_tag=L2557_RS16550;product=UDP-N-acetylmuramate dehydrogenase;protein_id=WP_075674346.1;transl_table=11 NZ_JAIKUA010000314.1 RefSeq gene 1503 2465 . + . ID=gene-L2557_RS16555;Name=birA;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=L2557_RS16555 NZ_JAIKUA010000314.1 Protein Homology CDS 1503 2465 . + 0 ID=cds-WP_075674347.1;Parent=gene-L2557_RS16555;Dbxref=GenBank:WP_075674347.1;Name=WP_075674347.1;Ontology_term=GO:0036211,GO:0004077;gbkey=CDS;gene=birA;go_function=biotin--[biotin carboxyl-carrier protein] ligase activity|0004077||IEA;go_process=protein modification process|0036211||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000655754.1;locus_tag=L2557_RS16555;product=bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA;protein_id=WP_075674347.1;transl_table=11 NZ_JAIKUA010000314.1 RefSeq gene 2597 3544 . - . ID=gene-L2557_RS16560;Name=coaA;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=L2557_RS16560 NZ_JAIKUA010000314.1 Protein Homology CDS 2597 3544 . - 0 ID=cds-WP_099660050.1;Parent=gene-L2557_RS16560;Dbxref=GenBank:WP_099660050.1;Name=WP_099660050.1;Ontology_term=GO:0015937,GO:0004594;gbkey=CDS;gene=coaA;go_function=pantothenate kinase activity|0004594||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011148799.1;locus_tag=L2557_RS16560;product=type I pantothenate kinase;protein_id=WP_099660050.1;transl_table=11 NZ_JAIKUA010000314.1 RefSeq gene 3981 4056 . + . ID=gene-L2557_RS16565;Name=L2557_RS16565;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS16565 NZ_JAIKUA010000314.1 tRNAscan-SE tRNA 3981 4056 . + . ID=rna-L2557_RS16565;Parent=gene-L2557_RS16565;anticodon=(pos:4014..4016);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS16565;product=tRNA-Thr NZ_JAIKUA010000314.1 tRNAscan-SE exon 3981 4056 . + . ID=exon-L2557_RS16565-1;Parent=rna-L2557_RS16565;anticodon=(pos:4014..4016);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS16565;product=tRNA-Thr ##sequence-region NZ_JAIKUA010000315.1 1 2378 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000315.1 RefSeq region 1 2378 . + . ID=NZ_JAIKUA010000315.1:1..2378;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000315.1 RefSeq gene 14 850 . - . ID=gene-L2557_RS16570;Name=tcdA;gbkey=Gene;gene=tcdA;gene_biotype=protein_coding;locus_tag=L2557_RS16570 NZ_JAIKUA010000315.1 Protein Homology CDS 14 850 . - 0 ID=cds-WP_099660241.1;Parent=gene-L2557_RS16570;Dbxref=GenBank:WP_099660241.1;Name=WP_099660241.1;Ontology_term=GO:0008641;gbkey=CDS;gene=tcdA;go_function=ubiquitin-like modifier activating enzyme activity|0008641||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245501.1;locus_tag=L2557_RS16570;product=tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA;protein_id=WP_099660241.1;transl_table=11 NZ_JAIKUA010000315.1 RefSeq gene 961 2055 . - . ID=gene-L2557_RS16575;Name=mltA;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=L2557_RS16575 NZ_JAIKUA010000315.1 Protein Homology CDS 961 2055 . - 0 ID=cds-WP_075671740.1;Parent=gene-L2557_RS16575;Dbxref=GenBank:WP_075671740.1;Name=WP_075671740.1;Ontology_term=GO:0009254,GO:0004553,GO:0019867;gbkey=CDS;gene=mltA;go_component=outer membrane|0019867||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=peptidoglycan turnover|0009254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535933.1;locus_tag=L2557_RS16575;product=murein transglycosylase A;protein_id=WP_075671740.1;transl_table=11 ##sequence-region NZ_JAIKUA010000316.1 1 7009 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000316.1 RefSeq region 1 7009 . + . ID=NZ_JAIKUA010000316.1:1..7009;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000316.1 RefSeq gene 1 789 . - . ID=gene-L2557_RS16580;Name=dkgA;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=L2557_RS16580;partial=true;start_range=.,1 NZ_JAIKUA010000316.1 Protein Homology CDS 1 789 . - 0 ID=cds-WP_235410217.1;Parent=gene-L2557_RS16580;Dbxref=GenBank:WP_235410217.1;Name=WP_235410217.1;Ontology_term=GO:0050580;gbkey=CDS;gene=dkgA;go_function=2%2C5-didehydrogluconate reductase activity|0050580||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123119.1;locus_tag=L2557_RS16580;partial=true;product=2%2C5-didehydrogluconate reductase DkgA;protein_id=WP_235410217.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000316.1 RefSeq gene 817 1974 . - . ID=gene-L2557_RS16585;Name=L2557_RS16585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16585 NZ_JAIKUA010000316.1 Protein Homology CDS 817 1974 . - 0 ID=cds-WP_235410218.1;Parent=gene-L2557_RS16585;Dbxref=GenBank:WP_235410218.1;Name=WP_235410218.1;Ontology_term=GO:0004022,GO:0018455,GO:0030554,GO:0046872;gbkey=CDS;go_function=alcohol dehydrogenase (NAD+) activity|0004022||IEA,alcohol dehydrogenase [NAD(P)+] activity|0018455||IEA,adenyl nucleotide binding|0030554||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248982.1;locus_tag=L2557_RS16585;product=iron-containing alcohol dehydrogenase;protein_id=WP_235410218.1;transl_table=11 NZ_JAIKUA010000316.1 RefSeq gene 2155 2937 . + . ID=gene-L2557_RS16590;Name=L2557_RS16590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16590 NZ_JAIKUA010000316.1 Protein Homology CDS 2155 2937 . + 0 ID=cds-WP_075673719.1;Parent=gene-L2557_RS16590;Dbxref=GenBank:WP_075673719.1;Name=WP_075673719.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252617.1;locus_tag=L2557_RS16590;product=class I SAM-dependent methyltransferase;protein_id=WP_075673719.1;transl_table=11 NZ_JAIKUA010000316.1 RefSeq gene 3106 3774 . - . ID=gene-L2557_RS16595;Name=L2557_RS16595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16595 NZ_JAIKUA010000316.1 Protein Homology CDS 3106 3774 . - 0 ID=cds-WP_075673720.1;Parent=gene-L2557_RS16595;Dbxref=GenBank:WP_075673720.1;Name=WP_075673720.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535197.1;locus_tag=L2557_RS16595;product=DedA family protein;protein_id=WP_075673720.1;transl_table=11 NZ_JAIKUA010000316.1 RefSeq gene 3900 5090 . - . ID=gene-L2557_RS16600;Name=metC;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=L2557_RS16600 NZ_JAIKUA010000316.1 Protein Homology CDS 3900 5090 . - 0 ID=cds-WP_099659986.1;Parent=gene-L2557_RS16600;Dbxref=GenBank:WP_099659986.1;Name=WP_099659986.1;Ontology_term=GO:0006520,GO:0019346,GO:0030170,GO:0047804;gbkey=CDS;gene=metC;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine-S-conjugate beta-lyase activity|0047804||IEA;go_process=amino acid metabolic process|0006520||IEA,transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245190.1;locus_tag=L2557_RS16600;product=cystathionine beta-lyase;protein_id=WP_099659986.1;transl_table=11 NZ_JAIKUA010000316.1 RefSeq gene 5421 6431 . + . ID=gene-L2557_RS16605;Name=exbB;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=L2557_RS16605 NZ_JAIKUA010000316.1 Protein Homology CDS 5421 6431 . + 0 ID=cds-WP_099659985.1;Parent=gene-L2557_RS16605;Dbxref=GenBank:WP_099659985.1;Name=WP_099659985.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=exbB;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926872.1;locus_tag=L2557_RS16605;product=tonB-system energizer ExbB;protein_id=WP_099659985.1;transl_table=11 NZ_JAIKUA010000316.1 RefSeq gene 6438 6866 . + . ID=gene-L2557_RS16610;Name=exbD;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=L2557_RS16610 NZ_JAIKUA010000316.1 Protein Homology CDS 6438 6866 . + 0 ID=cds-WP_075674386.1;Parent=gene-L2557_RS16610;Dbxref=GenBank:WP_075674386.1;Name=WP_075674386.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=exbD;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012146909.1;locus_tag=L2557_RS16610;product=TonB system transport protein ExbD;protein_id=WP_075674386.1;transl_table=11 ##sequence-region NZ_JAIKUA010000317.1 1 1969 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000317.1 RefSeq region 1 1969 . + . ID=NZ_JAIKUA010000317.1:1..1969;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000317.1 RefSeq gene 305 1918 . + . ID=gene-L2557_RS16615;Name=L2557_RS16615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16615 NZ_JAIKUA010000317.1 Protein Homology CDS 305 1918 . + 0 ID=cds-WP_075672945.1;Parent=gene-L2557_RS16615;Dbxref=GenBank:WP_075672945.1;Name=WP_075672945.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245418.1;locus_tag=L2557_RS16615;product=sigma 54-interacting transcriptional regulator;protein_id=WP_075672945.1;transl_table=11 ##sequence-region NZ_JAIKUA010000318.1 1 8351 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000318.1 RefSeq region 1 8351 . + . ID=NZ_JAIKUA010000318.1:1..8351;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000318.1 RefSeq gene 84 1730 . + . ID=gene-L2557_RS16620;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=L2557_RS16620 NZ_JAIKUA010000318.1 Protein Homology CDS 84 1730 . + 0 ID=cds-WP_099659915.1;Parent=gene-L2557_RS16620;Dbxref=GenBank:WP_099659915.1;Name=WP_099659915.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628311.1;locus_tag=L2557_RS16620;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_099659915.1;transl_table=11 NZ_JAIKUA010000318.1 RefSeq gene 2227 3576 . - . ID=gene-L2557_RS16625;Name=L2557_RS16625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16625 NZ_JAIKUA010000318.1 Protein Homology CDS 2227 3576 . - 0 ID=cds-WP_235410219.1;Parent=gene-L2557_RS16625;Dbxref=GenBank:WP_235410219.1;Name=WP_235410219.1;Ontology_term=GO:0055085,GO:0015562,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252441.1;locus_tag=L2557_RS16625;product=TolC family outer membrane protein;protein_id=WP_235410219.1;transl_table=11 NZ_JAIKUA010000318.1 RefSeq gene 3579 4904 . - . ID=gene-L2557_RS16630;Name=L2557_RS16630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16630 NZ_JAIKUA010000318.1 Protein Homology CDS 3579 4904 . - 0 ID=cds-WP_075674099.1;Parent=gene-L2557_RS16630;Dbxref=GenBank:WP_075674099.1;Name=WP_075674099.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247333.1;locus_tag=L2557_RS16630;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_075674099.1;transl_table=11 NZ_JAIKUA010000318.1 RefSeq gene 4921 6660 . - . ID=gene-L2557_RS16635;Name=L2557_RS16635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16635 NZ_JAIKUA010000318.1 Protein Homology CDS 4921 6660 . - 0 ID=cds-WP_196563587.1;Parent=gene-L2557_RS16635;Dbxref=GenBank:WP_196563587.1;Name=WP_196563587.1;Ontology_term=GO:0030253,GO:0005524,GO:0016887,GO:0034040,GO:0140359,GO:0030256;gbkey=CDS;go_component=type I protein secretion system complex|0030256||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled lipid transmembrane transporter activity|0034040||IEA,ABC-type transporter activity|0140359||IEA;go_process=protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252439.1;locus_tag=L2557_RS16635;product=type I secretion system permease/ATPase;protein_id=WP_196563587.1;transl_table=11 NZ_JAIKUA010000318.1 RefSeq gene 6825 8252 . - . ID=gene-L2557_RS16640;Name=L2557_RS16640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16640 NZ_JAIKUA010000318.1 Protein Homology CDS 6825 8252 . - 0 ID=cds-WP_075674101.1;Parent=gene-L2557_RS16640;Dbxref=GenBank:WP_075674101.1;Name=WP_075674101.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872,GO:0005615;gbkey=CDS;go_component=extracellular space|0005615||IEA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247335.1;locus_tag=L2557_RS16640;product=serralysin family metalloprotease;protein_id=WP_075674101.1;transl_table=11 ##sequence-region NZ_JAIKUA010000319.1 1 2321 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000319.1 RefSeq region 1 2321 . + . ID=NZ_JAIKUA010000319.1:1..2321;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000319.1 RefSeq gene 83 430 . + . ID=gene-L2557_RS16645;Name=L2557_RS16645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16645 NZ_JAIKUA010000319.1 GeneMarkS-2+ CDS 83 430 . + 0 ID=cds-WP_088494739.1;Parent=gene-L2557_RS16645;Dbxref=GenBank:WP_088494739.1;Name=WP_088494739.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS16645;product=hypothetical protein;protein_id=WP_088494739.1;transl_table=11 NZ_JAIKUA010000319.1 RefSeq gene 502 1431 . - . ID=gene-L2557_RS16650;Name=L2557_RS16650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16650 NZ_JAIKUA010000319.1 Protein Homology CDS 502 1431 . - 0 ID=cds-WP_099660070.1;Parent=gene-L2557_RS16650;Dbxref=GenBank:WP_099660070.1;Name=WP_099660070.1;Ontology_term=GO:0004601,GO:0020037;gbkey=CDS;go_function=peroxidase activity|0004601||IEA,heme binding|0020037||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250276.1;locus_tag=L2557_RS16650;product=Dyp-type peroxidase;protein_id=WP_099660070.1;transl_table=11 NZ_JAIKUA010000319.1 RefSeq gene 1623 2201 . - . ID=gene-L2557_RS16655;Name=L2557_RS16655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16655 NZ_JAIKUA010000319.1 Protein Homology CDS 1623 2201 . - 0 ID=cds-WP_180273014.1;Parent=gene-L2557_RS16655;Dbxref=GenBank:WP_180273014.1;Name=WP_180273014.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006659866.1;locus_tag=L2557_RS16655;product=YebB family permuted papain-like enzyme;protein_id=WP_180273014.1;transl_table=11 ##sequence-region NZ_JAIKUA010000032.1 1 4422 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000032.1 RefSeq region 1 4422 . + . ID=NZ_JAIKUA010000032.1:1..4422;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000032.1 RefSeq gene 32 856 . - . ID=gene-L2557_RS03320;Name=L2557_RS03320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03320 NZ_JAIKUA010000032.1 Protein Homology CDS 32 856 . - 0 ID=cds-WP_075674353.1;Parent=gene-L2557_RS03320;Dbxref=GenBank:WP_075674353.1;Name=WP_075674353.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662019.1;locus_tag=L2557_RS03320;product=VanW family protein;protein_id=WP_075674353.1;transl_table=11 NZ_JAIKUA010000032.1 RefSeq gene 977 1891 . - . ID=gene-L2557_RS03325;Name=L2557_RS03325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03325 NZ_JAIKUA010000032.1 Protein Homology CDS 977 1891 . - 0 ID=cds-WP_075674354.1;Parent=gene-L2557_RS03325;Dbxref=GenBank:WP_075674354.1;Name=WP_075674354.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912699.1;locus_tag=L2557_RS03325;product=LysR family transcriptional regulator;protein_id=WP_075674354.1;transl_table=11 NZ_JAIKUA010000032.1 RefSeq gene 2001 3494 . + . ID=gene-L2557_RS03330;Name=L2557_RS03330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03330 NZ_JAIKUA010000032.1 Protein Homology CDS 2001 3494 . + 0 ID=cds-WP_098942054.1;Parent=gene-L2557_RS03330;Dbxref=GenBank:WP_098942054.1;Name=WP_098942054.1;Ontology_term=GO:0006811,GO:0055085,GO:0015293,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA,transmembrane transporter activity|0022857||IEA;go_process=monoatomic ion transport|0006811||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008912700.1;locus_tag=L2557_RS03330;product=SLC13 family permease;protein_id=WP_098942054.1;transl_table=11 NZ_JAIKUA010000032.1 RefSeq gene 3517 4122 . + . ID=gene-L2557_RS03335;Name=L2557_RS03335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03335 NZ_JAIKUA010000032.1 Protein Homology CDS 3517 4122 . + 0 ID=cds-WP_075674356.1;Parent=gene-L2557_RS03335;Dbxref=GenBank:WP_075674356.1;Name=WP_075674356.1;Ontology_term=GO:0016791;gbkey=CDS;go_function=phosphatase activity|0016791||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013814426.1;locus_tag=L2557_RS03335;product=histidine phosphatase family protein;protein_id=WP_075674356.1;transl_table=11 ##sequence-region NZ_JAIKUA010000320.1 1 753 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000320.1 RefSeq region 1 753 . + . ID=NZ_JAIKUA010000320.1:1..753;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000320.1 RefSeq gene 1 190 . + . ID=gene-L2557_RS16660;Name=L2557_RS16660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16660;partial=true;start_range=.,1 NZ_JAIKUA010000320.1 Protein Homology CDS 1 190 . + 1 ID=cds-WP_328253367.1;Parent=gene-L2557_RS16660;Dbxref=GenBank:WP_328253367.1;Name=WP_328253367.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534310.1;locus_tag=L2557_RS16660;partial=true;product=formate dehydrogenase N subunit beta transmembrane domain-containing protein;protein_id=WP_328253367.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000320.1 RefSeq gene 187 753 . + . ID=gene-L2557_RS16665;Name=L2557_RS16665;end_range=753,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16665;partial=true NZ_JAIKUA010000320.1 Protein Homology CDS 187 753 . + 0 ID=cds-WP_235410220.1;Parent=gene-L2557_RS16665;Dbxref=GenBank:WP_235410220.1;Name=WP_235410220.1;Ontology_term=GO:0009061,GO:0008863,GO:0009055,GO:0009326;end_range=753,.;gbkey=CDS;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA;go_process=anaerobic respiration|0009061||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246538.1;locus_tag=L2557_RS16665;partial=true;product=formate dehydrogenase subunit gamma;protein_id=WP_235410220.1;transl_table=11 ##sequence-region NZ_JAIKUA010000321.1 1 1217 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000321.1 RefSeq region 1 1217 . + . ID=NZ_JAIKUA010000321.1:1..1217;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000321.1 RefSeq gene 200 862 . + . ID=gene-L2557_RS16670;Name=fsa;gbkey=Gene;gene=fsa;gene_biotype=protein_coding;locus_tag=L2557_RS16670 NZ_JAIKUA010000321.1 Protein Homology CDS 200 862 . + 0 ID=cds-WP_164530733.1;Parent=gene-L2557_RS16670;Dbxref=GenBank:WP_164530733.1;Name=WP_164530733.1;Ontology_term=GO:0005975,GO:0016832;gbkey=CDS;gene=fsa;go_function=aldehyde-lyase activity|0016832||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368459.1;locus_tag=L2557_RS16670;product=fructose-6-phosphate aldolase;protein_id=WP_164530733.1;transl_table=11 ##sequence-region NZ_JAIKUA010000322.1 1 884 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000322.1 RefSeq region 1 884 . + . ID=NZ_JAIKUA010000322.1:1..884;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000322.1 RefSeq gene 1 840 . + . ID=gene-L2557_RS16675;Name=L2557_RS16675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16675;partial=true;start_range=.,1 NZ_JAIKUA010000322.1 Protein Homology CDS 1 840 . + 0 ID=cds-WP_268830907.1;Parent=gene-L2557_RS16675;Dbxref=GenBank:WP_268830907.1;Name=WP_268830907.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015696793.1;locus_tag=L2557_RS16675;partial=true;product=pentapeptide repeat-containing protein;protein_id=WP_268830907.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000323.1 1 5560 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000323.1 RefSeq region 1 5560 . + . ID=NZ_JAIKUA010000323.1:1..5560;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000323.1 RefSeq gene 814 1047 . + . ID=gene-L2557_RS16680;Name=L2557_RS16680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16680 NZ_JAIKUA010000323.1 Protein Homology CDS 814 1047 . + 0 ID=cds-WP_075674064.1;Parent=gene-L2557_RS16680;Dbxref=GenBank:WP_075674064.1;Name=WP_075674064.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533094.1;locus_tag=L2557_RS16680;product=DNA polymerase III subunit theta;protein_id=WP_075674064.1;transl_table=11 NZ_JAIKUA010000323.1 RefSeq gene 1150 1539 . - . ID=gene-L2557_RS16685;Name=yebF;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=L2557_RS16685 NZ_JAIKUA010000323.1 Protein Homology CDS 1150 1539 . - 0 ID=cds-WP_075674065.1;Parent=gene-L2557_RS16685;Dbxref=GenBank:WP_075674065.1;Name=WP_075674065.1;gbkey=CDS;gene=yebF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368045.1;locus_tag=L2557_RS16685;product=protein YebF;protein_id=WP_075674065.1;transl_table=11 NZ_JAIKUA010000323.1 RefSeq gene 1636 1818 . - . ID=gene-L2557_RS16690;Name=L2557_RS16690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16690 NZ_JAIKUA010000323.1 Protein Homology CDS 1636 1818 . - 0 ID=cds-WP_069367593.1;Parent=gene-L2557_RS16690;Dbxref=GenBank:WP_069367593.1;Name=WP_069367593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243469.1;locus_tag=L2557_RS16690;product=YoaH family protein;protein_id=WP_069367593.1;transl_table=11 NZ_JAIKUA010000323.1 RefSeq gene 1931 3316 . + . ID=gene-L2557_RS16695;Name=pabB;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=L2557_RS16695 NZ_JAIKUA010000323.1 Protein Homology CDS 1931 3316 . + 0 ID=cds-WP_075674066.1;Parent=gene-L2557_RS16695;Dbxref=GenBank:WP_075674066.1;Name=WP_075674066.1;Ontology_term=GO:0009396;gbkey=CDS;gene=pabB;go_process=folic acid-containing compound biosynthetic process|0009396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368046.1;locus_tag=L2557_RS16695;product=aminodeoxychorismate synthase component 1;protein_id=WP_075674066.1;transl_table=11 NZ_JAIKUA010000323.1 RefSeq gene 3303 3866 . + . ID=gene-L2557_RS16700;Name=L2557_RS16700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16700 NZ_JAIKUA010000323.1 Protein Homology CDS 3303 3866 . + 0 ID=cds-WP_075674067.1;Parent=gene-L2557_RS16700;Dbxref=GenBank:WP_075674067.1;Name=WP_075674067.1;Ontology_term=GO:0000287,GO:0010945;gbkey=CDS;go_function=magnesium ion binding|0000287||IEA,coenzyme A diphosphatase activity|0010945||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250809.1;locus_tag=L2557_RS16700;product=CoA pyrophosphatase;protein_id=WP_075674067.1;transl_table=11 NZ_JAIKUA010000323.1 RefSeq gene 4051 5412 . + . ID=gene-L2557_RS16705;Name=L2557_RS16705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16705 NZ_JAIKUA010000323.1 Protein Homology CDS 4051 5412 . + 0 ID=cds-WP_075674068.1;Parent=gene-L2557_RS16705;Dbxref=GenBank:WP_075674068.1;Name=WP_075674068.1;Ontology_term=GO:0006094,GO:0003941;gbkey=CDS;go_function=L-serine ammonia-lyase activity|0003941||IEA;go_process=gluconeogenesis|0006094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227643.1;locus_tag=L2557_RS16705;product=L-serine ammonia-lyase;protein_id=WP_075674068.1;transl_table=11 ##sequence-region NZ_JAIKUA010000324.1 1 3241 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000324.1 RefSeq region 1 3241 . + . ID=NZ_JAIKUA010000324.1:1..3241;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000324.1 RefSeq gene 1 1800 . + . ID=gene-L2557_RS16710;Name=L2557_RS16710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16710;partial=true;start_range=.,1 NZ_JAIKUA010000324.1 Protein Homology CDS 1 1800 . + 0 ID=cds-WP_235410222.1;Parent=gene-L2557_RS16710;Dbxref=GenBank:WP_235410222.1;Name=WP_235410222.1;Ontology_term=GO:0005524,GO:0015645;gbkey=CDS;go_function=ATP binding|0005524||IEA,fatty acid ligase activity|0015645||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242048.1;locus_tag=L2557_RS16710;partial=true;product=AMP-dependent synthetase/ligase;protein_id=WP_235410222.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000324.1 RefSeq gene 2023 3030 . + . ID=gene-L2557_RS16715;Name=cra;gbkey=Gene;gene=cra;gene_biotype=protein_coding;locus_tag=L2557_RS16715 NZ_JAIKUA010000324.1 Protein Homology CDS 2023 3030 . + 0 ID=cds-WP_075670767.1;Parent=gene-L2557_RS16715;Dbxref=GenBank:WP_075670767.1;Name=WP_075670767.1;Ontology_term=GO:0006355,GO:0009750,GO:0003677;gbkey=CDS;gene=cra;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,response to fructose|0009750||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244128.1;locus_tag=L2557_RS16715;product=catabolite repressor/activator;protein_id=WP_075670767.1;transl_table=11 ##sequence-region NZ_JAIKUA010000325.1 1 1743 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000325.1 RefSeq region 1 1743 . + . ID=NZ_JAIKUA010000325.1:1..1743;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000325.1 RefSeq gene 125 1743 . + . ID=gene-L2557_RS16720;Name=L2557_RS16720;end_range=1743,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16720;partial=true NZ_JAIKUA010000325.1 Protein Homology CDS 125 1743 . + 0 ID=cds-WP_235410223.1;Parent=gene-L2557_RS16720;Dbxref=GenBank:WP_235410223.1;Name=WP_235410223.1;Ontology_term=GO:0005509,GO:0005615;end_range=1743,.;gbkey=CDS;go_component=extracellular space|0005615||IEA;go_function=calcium ion binding|0005509||IEA;inference=COORDINATES: protein motif:HMM:NF020137.6;locus_tag=L2557_RS16720;partial=true;product=M10 family metallopeptidase C-terminal domain-containing protein;protein_id=WP_235410223.1;transl_table=11 ##sequence-region NZ_JAIKUA010000326.1 1 871 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000326.1 RefSeq region 1 871 . + . ID=NZ_JAIKUA010000326.1:1..871;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000326.1 RefSeq gene 1 577 . + . ID=gene-L2557_RS16725;Name=L2557_RS16725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16725;partial=true;start_range=.,1 NZ_JAIKUA010000326.1 Protein Homology CDS 1 577 . + 1 ID=cds-WP_235410224.1;Parent=gene-L2557_RS16725;Dbxref=GenBank:WP_235410224.1;Name=WP_235410224.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249213.1;locus_tag=L2557_RS16725;partial=true;product=type III secretion protein;protein_id=WP_235410224.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000326.1 RefSeq gene 582 871 . + . ID=gene-L2557_RS16730;Name=L2557_RS16730;end_range=871,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16730;partial=true NZ_JAIKUA010000326.1 GeneMarkS-2+ CDS 582 871 . + 0 ID=cds-WP_235410225.1;Parent=gene-L2557_RS16730;Dbxref=GenBank:WP_235410225.1;Name=WP_235410225.1;end_range=871,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS16730;partial=true;product=hypothetical protein;protein_id=WP_235410225.1;transl_table=11 ##sequence-region NZ_JAIKUA010000327.1 1 3147 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000327.1 RefSeq region 1 3147 . + . ID=NZ_JAIKUA010000327.1:1..3147;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000327.1 RefSeq gene 166 630 . + . ID=gene-L2557_RS16735;Name=L2557_RS16735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16735 NZ_JAIKUA010000327.1 Protein Homology CDS 166 630 . + 0 ID=cds-WP_075673238.1;Parent=gene-L2557_RS16735;Dbxref=GenBank:WP_075673238.1;Name=WP_075673238.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF024275.6;locus_tag=L2557_RS16735;product=OB-fold protein;protein_id=WP_075673238.1;transl_table=11 NZ_JAIKUA010000327.1 RefSeq gene 986 1327 . + . ID=gene-L2557_RS16740;Name=L2557_RS16740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16740 NZ_JAIKUA010000327.1 Protein Homology CDS 986 1327 . + 0 ID=cds-WP_006537039.1;Parent=gene-L2557_RS16740;Dbxref=GenBank:WP_006537039.1;Name=WP_006537039.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658226.1;locus_tag=L2557_RS16740;product=Grx4 family monothiol glutaredoxin;protein_id=WP_006537039.1;transl_table=11 NZ_JAIKUA010000327.1 RefSeq gene 1450 2088 . - . ID=gene-L2557_RS16745;Name=rnt;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=L2557_RS16745 NZ_JAIKUA010000327.1 Protein Homology CDS 1450 2088 . - 0 ID=cds-WP_075673239.1;Parent=gene-L2557_RS16745;Dbxref=GenBank:WP_075673239.1;Name=WP_075673239.1;Ontology_term=GO:0006364,GO:0042780,GO:0016896;gbkey=CDS;gene=rnt;go_function=RNA exonuclease activity%2C producing 5'-phosphomonoesters|0016896||IEA;go_process=rRNA processing|0006364||IEA,tRNA 3'-end processing|0042780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243132.1;locus_tag=L2557_RS16745;product=ribonuclease T;protein_id=WP_075673239.1;transl_table=11 NZ_JAIKUA010000327.1 RefSeq gene 2185 2592 . - . ID=gene-L2557_RS16750;Name=gloA;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=L2557_RS16750 NZ_JAIKUA010000327.1 Protein Homology CDS 2185 2592 . - 0 ID=cds-WP_036937247.1;Parent=gene-L2557_RS16750;Dbxref=GenBank:WP_036937247.1;Name=WP_036937247.1;gbkey=CDS;gene=gloA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210948.1;locus_tag=L2557_RS16750;product=lactoylglutathione lyase;protein_id=WP_036937247.1;transl_table=11 NZ_JAIKUA010000327.1 RefSeq gene 2778 3017 . + . ID=gene-L2557_RS16755;Name=L2557_RS16755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16755 NZ_JAIKUA010000327.1 Protein Homology CDS 2778 3017 . + 0 ID=cds-WP_109418925.1;Parent=gene-L2557_RS16755;Dbxref=GenBank:WP_109418925.1;Name=WP_109418925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243130.1;locus_tag=L2557_RS16755;product=DUF1289 domain-containing protein;protein_id=WP_109418925.1;transl_table=11 ##sequence-region NZ_JAIKUA010000328.1 1 1892 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000328.1 RefSeq region 1 1892 . + . ID=NZ_JAIKUA010000328.1:1..1892;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000328.1 RefSeq gene 111 419 . - . ID=gene-L2557_RS16760;Name=cutA;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=L2557_RS16760 NZ_JAIKUA010000328.1 Protein Homology CDS 111 419 . - 0 ID=cds-WP_075674264.1;Parent=gene-L2557_RS16760;Dbxref=GenBank:WP_075674264.1;Name=WP_075674264.1;Ontology_term=GO:0010038;gbkey=CDS;gene=cutA;go_process=response to metal ion|0010038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628044.1;locus_tag=L2557_RS16760;product=divalent-cation tolerance protein CutA;protein_id=WP_075674264.1;transl_table=11 NZ_JAIKUA010000328.1 RefSeq gene 791 1774 . + . ID=gene-L2557_RS16765;Name=L2557_RS16765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16765 NZ_JAIKUA010000328.1 Protein Homology CDS 791 1774 . + 0 ID=cds-WP_075674265.1;Parent=gene-L2557_RS16765;Dbxref=GenBank:WP_075674265.1;Name=WP_075674265.1;Ontology_term=GO:0006355,GO:0003677,GO:0030246;gbkey=CDS;go_function=DNA binding|0003677||IEA,carbohydrate binding|0030246||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243314.1;locus_tag=L2557_RS16765;product=sugar-binding transcriptional regulator;protein_id=WP_075674265.1;transl_table=11 ##sequence-region NZ_JAIKUA010000329.1 1 216 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000329.1 RefSeq region 1 216 . + . ID=NZ_JAIKUA010000329.1:1..216;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000329.1 RefSeq gene 21 96 . - . ID=gene-L2557_RS16770;Name=L2557_RS16770;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS16770 NZ_JAIKUA010000329.1 tRNAscan-SE tRNA 21 96 . - . ID=rna-L2557_RS16770;Parent=gene-L2557_RS16770;anticodon=(pos:complement(61..63));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS16770;product=tRNA-Thr NZ_JAIKUA010000329.1 tRNAscan-SE exon 21 96 . - . ID=exon-L2557_RS16770-1;Parent=rna-L2557_RS16770;anticodon=(pos:complement(61..63));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS16770;product=tRNA-Thr NZ_JAIKUA010000329.1 RefSeq gene 103 190 . - . ID=gene-L2557_RS16775;Name=L2557_RS16775;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS16775 NZ_JAIKUA010000329.1 tRNAscan-SE tRNA 103 190 . - . ID=rna-L2557_RS16775;Parent=gene-L2557_RS16775;anticodon=(pos:complement(154..156));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS16775;product=tRNA-Ser NZ_JAIKUA010000329.1 tRNAscan-SE exon 103 190 . - . ID=exon-L2557_RS16775-1;Parent=rna-L2557_RS16775;anticodon=(pos:complement(154..156));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS16775;product=tRNA-Ser ##sequence-region NZ_JAIKUA010000033.1 1 2611 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000033.1 RefSeq region 1 2611 . + . ID=NZ_JAIKUA010000033.1:1..2611;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000033.1 RefSeq gene 146 1060 . + . ID=gene-L2557_RS03340;Name=yddG;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=L2557_RS03340 NZ_JAIKUA010000033.1 Protein Homology CDS 146 1060 . + 0 ID=cds-WP_099660500.1;Parent=gene-L2557_RS03340;Dbxref=GenBank:WP_099660500.1;Name=WP_099660500.1;Ontology_term=GO:0016020;gbkey=CDS;gene=yddG;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536337.1;locus_tag=L2557_RS03340;product=aromatic amino acid DMT transporter YddG;protein_id=WP_099660500.1;transl_table=11 NZ_JAIKUA010000033.1 RefSeq gene 1324 2598 . + . ID=gene-L2557_RS03345;Name=L2557_RS03345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03345 NZ_JAIKUA010000033.1 Protein Homology CDS 1324 2598 . + 0 ID=cds-WP_191901598.1;Parent=gene-L2557_RS03345;Dbxref=GenBank:WP_191901598.1;Name=WP_191901598.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250120.1;locus_tag=L2557_RS03345;product=bifunctional O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase;protein_id=WP_191901598.1;transl_table=11 ##sequence-region NZ_JAIKUA010000330.1 1 12989 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000330.1 RefSeq region 1 12989 . + . ID=NZ_JAIKUA010000330.1:1..12989;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000330.1 RefSeq gene 88 396 . + . ID=gene-L2557_RS16780;Name=L2557_RS16780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16780 NZ_JAIKUA010000330.1 Protein Homology CDS 88 396 . + 0 ID=cds-WP_075674216.1;Parent=gene-L2557_RS16780;Dbxref=GenBank:WP_075674216.1;Name=WP_075674216.1;Ontology_term=GO:0019835;gbkey=CDS;go_process=cytolysis|0019835||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012987799.1;locus_tag=L2557_RS16780;product=phage holin%2C lambda family;protein_id=WP_075674216.1;transl_table=11 NZ_JAIKUA010000330.1 RefSeq gene 389 793 . + . ID=gene-L2557_RS16785;Name=L2557_RS16785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16785 NZ_JAIKUA010000330.1 Protein Homology CDS 389 793 . + 0 ID=cds-WP_075674215.1;Parent=gene-L2557_RS16785;Dbxref=GenBank:WP_075674215.1;Name=WP_075674215.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248366.1;locus_tag=L2557_RS16785;product=structural protein;protein_id=WP_075674215.1;transl_table=11 NZ_JAIKUA010000330.1 RefSeq gene 790 1239 . + . ID=gene-L2557_RS16790;Name=L2557_RS16790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16790 NZ_JAIKUA010000330.1 Protein Homology CDS 790 1239 . + 0 ID=cds-WP_099660644.1;Parent=gene-L2557_RS16790;Dbxref=GenBank:WP_099660644.1;Name=WP_099660644.1;Ontology_term=GO:0019835,GO:0044659;gbkey=CDS;go_process=cytolysis|0019835||IEA,viral release from host cell by cytolysis|0044659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248365.1;locus_tag=L2557_RS16790;product=lysis system i-spanin subunit Rz;protein_id=WP_099660644.1;transl_table=11 NZ_JAIKUA010000330.1 RefSeq gene 1335 1847 . + . ID=gene-L2557_RS16795;Name=L2557_RS16795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16795 NZ_JAIKUA010000330.1 Protein Homology CDS 1335 1847 . + 0 ID=cds-WP_099660643.1;Parent=gene-L2557_RS16795;Dbxref=GenBank:WP_099660643.1;Name=WP_099660643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368090.1;locus_tag=L2557_RS16795;product=phage gateway protein;protein_id=WP_099660643.1;transl_table=11 NZ_JAIKUA010000330.1 RefSeq gene 1856 3343 . + . ID=gene-L2557_RS16800;Name=L2557_RS16800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16800 NZ_JAIKUA010000330.1 Protein Homology CDS 1856 3343 . + 0 ID=cds-WP_075674212.1;Parent=gene-L2557_RS16800;Dbxref=GenBank:WP_075674212.1;Name=WP_075674212.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368089.1;locus_tag=L2557_RS16800;product=DUF3383 domain-containing protein;protein_id=WP_075674212.1;transl_table=11 NZ_JAIKUA010000330.1 RefSeq gene 3354 3806 . + . ID=gene-L2557_RS16805;Name=L2557_RS16805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16805 NZ_JAIKUA010000330.1 Protein Homology CDS 3354 3806 . + 0 ID=cds-WP_075674211.1;Parent=gene-L2557_RS16805;Dbxref=GenBank:WP_075674211.1;Name=WP_075674211.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368088.1;locus_tag=L2557_RS16805;product=phage tail fiber protein;protein_id=WP_075674211.1;transl_table=11 NZ_JAIKUA010000330.1 RefSeq gene 3869 4327 . + . ID=gene-L2557_RS16810;Name=L2557_RS16810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16810 NZ_JAIKUA010000330.1 Protein Homology CDS 3869 4327 . + 0 ID=cds-WP_099660642.1;Parent=gene-L2557_RS16810;Dbxref=GenBank:WP_099660642.1;Name=WP_099660642.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243627.1;locus_tag=L2557_RS16810;product=hypothetical protein;protein_id=WP_099660642.1;transl_table=11 NZ_JAIKUA010000330.1 RefSeq gene 4410 6713 . + . ID=gene-L2557_RS16815;Name=L2557_RS16815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16815 NZ_JAIKUA010000330.1 Protein Homology CDS 4410 6713 . + 0 ID=cds-WP_099660641.1;Parent=gene-L2557_RS16815;Dbxref=GenBank:WP_099660641.1;Name=WP_099660641.1;Ontology_term=GO:0098003,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628009.1;locus_tag=L2557_RS16815;product=phage tail family protein;protein_id=WP_099660641.1;transl_table=11 NZ_JAIKUA010000330.1 RefSeq gene 6716 7198 . + . ID=gene-L2557_RS16820;Name=L2557_RS16820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16820 NZ_JAIKUA010000330.1 Protein Homology CDS 6716 7198 . + 0 ID=cds-WP_075674208.1;Parent=gene-L2557_RS16820;Dbxref=GenBank:WP_075674208.1;Name=WP_075674208.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250719.1;locus_tag=L2557_RS16820;product=phage baseplate protein;protein_id=WP_075674208.1;transl_table=11 NZ_JAIKUA010000330.1 RefSeq gene 7217 7537 . + . ID=gene-L2557_RS16825;Name=L2557_RS16825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16825 NZ_JAIKUA010000330.1 Protein Homology CDS 7217 7537 . + 0 ID=cds-WP_075674207.1;Parent=gene-L2557_RS16825;Dbxref=GenBank:WP_075674207.1;Name=WP_075674207.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250595.1;locus_tag=L2557_RS16825;product=phage baseplate plug family protein;protein_id=WP_075674207.1;transl_table=11 NZ_JAIKUA010000330.1 RefSeq gene 7506 8318 . + . ID=gene-L2557_RS16830;Name=L2557_RS16830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16830 NZ_JAIKUA010000330.1 Protein Homology CDS 7506 8318 . + 0 ID=cds-WP_075674206.1;Parent=gene-L2557_RS16830;Dbxref=GenBank:WP_075674206.1;Name=WP_075674206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243622.1;locus_tag=L2557_RS16830;product=baseplate hub protein;protein_id=WP_075674206.1;transl_table=11 NZ_JAIKUA010000330.1 RefSeq gene 8321 9013 . + . ID=gene-L2557_RS16835;Name=L2557_RS16835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16835 NZ_JAIKUA010000330.1 Protein Homology CDS 8321 9013 . + 0 ID=cds-WP_075674205.1;Parent=gene-L2557_RS16835;Dbxref=GenBank:WP_075674205.1;Name=WP_075674205.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827849.1;locus_tag=L2557_RS16835;product=Gp138 family membrane-puncturing spike protein;protein_id=WP_075674205.1;transl_table=11 NZ_JAIKUA010000330.1 RefSeq gene 9010 9354 . + . ID=gene-L2557_RS16840;Name=L2557_RS16840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16840 NZ_JAIKUA010000330.1 Protein Homology CDS 9010 9354 . + 0 ID=cds-WP_099660640.1;Parent=gene-L2557_RS16840;Dbxref=GenBank:WP_099660640.1;Name=WP_099660640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243617.1;locus_tag=L2557_RS16840;product=hypothetical protein;protein_id=WP_099660640.1;transl_table=11 NZ_JAIKUA010000330.1 RefSeq gene 9347 10534 . + . ID=gene-L2557_RS16845;Name=L2557_RS16845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16845 NZ_JAIKUA010000330.1 Protein Homology CDS 9347 10534 . + 0 ID=cds-WP_235410226.1;Parent=gene-L2557_RS16845;Dbxref=GenBank:WP_235410226.1;Name=WP_235410226.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243616.1;locus_tag=L2557_RS16845;product=baseplate J/gp47 family protein;protein_id=WP_235410226.1;transl_table=11 NZ_JAIKUA010000330.1 RefSeq gene 10531 11187 . + . ID=gene-L2557_RS16850;Name=L2557_RS16850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16850 NZ_JAIKUA010000330.1 Protein Homology CDS 10531 11187 . + 0 ID=cds-WP_159241953.1;Parent=gene-L2557_RS16850;Dbxref=GenBank:WP_159241953.1;Name=WP_159241953.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243615.1;locus_tag=L2557_RS16850;product=DUF2612 domain-containing protein;protein_id=WP_159241953.1;transl_table=11 NZ_JAIKUA010000330.1 RefSeq gene 11193 12524 . + . ID=gene-L2557_RS16855;Name=L2557_RS16855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16855 NZ_JAIKUA010000330.1 Protein Homology CDS 11193 12524 . + 0 ID=cds-WP_219410368.1;Parent=gene-L2557_RS16855;Dbxref=GenBank:WP_219410368.1;Name=WP_219410368.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628012.1;locus_tag=L2557_RS16855;product=phage baseplate protein;protein_id=WP_219410368.1;transl_table=11 NZ_JAIKUA010000330.1 RefSeq gene 12586 12989 . + . ID=gene-L2557_RS16860;Name=L2557_RS16860;end_range=12989,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16860;partial=true NZ_JAIKUA010000330.1 Protein Homology CDS 12586 12989 . + 0 ID=cds-WP_235410227.1;Parent=gene-L2557_RS16860;Dbxref=GenBank:WP_235410227.1;Name=WP_235410227.1;Ontology_term=GO:0008080,GO:0016746;end_range=12989,.;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: protein motif:HMM:NF012792.6;locus_tag=L2557_RS16860;partial=true;product=GNAT family N-acetyltransferase;protein_id=WP_235410227.1;transl_table=11 ##sequence-region NZ_JAIKUA010000331.1 1 3583 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000331.1 RefSeq region 1 3583 . + . ID=NZ_JAIKUA010000331.1:1..3583;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000331.1 RefSeq gene 32 391 . + . ID=gene-L2557_RS16865;Name=L2557_RS16865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16865 NZ_JAIKUA010000331.1 GeneMarkS-2+ CDS 32 391 . + 0 ID=cds-WP_075672891.1;Parent=gene-L2557_RS16865;Dbxref=GenBank:WP_075672891.1;Name=WP_075672891.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS16865;product=hypothetical protein;protein_id=WP_075672891.1;transl_table=11 NZ_JAIKUA010000331.1 RefSeq gene 477 1196 . + . ID=gene-L2557_RS16870;Name=L2557_RS16870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16870 NZ_JAIKUA010000331.1 Protein Homology CDS 477 1196 . + 0 ID=cds-WP_075672890.1;Parent=gene-L2557_RS16870;Dbxref=GenBank:WP_075672890.1;Name=WP_075672890.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014914.6;locus_tag=L2557_RS16870;product=scabin-related ADP-ribosyltransferase;protein_id=WP_075672890.1;transl_table=11 NZ_JAIKUA010000331.1 RefSeq pseudogene 1402 1629 . + . ID=gene-L2557_RS16875;Name=L2557_RS16875;end_range=1629,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS16875;partial=true;pseudo=true NZ_JAIKUA010000331.1 Protein Homology CDS 1402 1629 . + 0 ID=cds-L2557_RS16875;Parent=gene-L2557_RS16875;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;end_range=1629,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227090.1;locus_tag=L2557_RS16875;partial=true;product=bestrophin family protein;pseudo=true;transl_table=11 NZ_JAIKUA010000331.1 RefSeq gene 1867 3396 . - . ID=gene-L2557_RS16880;Name=L2557_RS16880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16880 NZ_JAIKUA010000331.1 Protein Homology CDS 1867 3396 . - 0 ID=cds-WP_075672889.1;Parent=gene-L2557_RS16880;Dbxref=GenBank:WP_075672889.1;Name=WP_075672889.1;Ontology_term=GO:0007165,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628548.1;locus_tag=L2557_RS16880;product=methyl-accepting chemotaxis protein;protein_id=WP_075672889.1;transl_table=11 ##sequence-region NZ_JAIKUA010000332.1 1 1094 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000332.1 RefSeq region 1 1094 . + . ID=NZ_JAIKUA010000332.1:1..1094;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000332.1 RefSeq gene 1 1094 . - . ID=gene-L2557_RS16885;Name=L2557_RS16885;end_range=1094,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16885;partial=true;start_range=.,1 NZ_JAIKUA010000332.1 Protein Homology CDS 1 1094 . - 1 ID=cds-WP_235410228.1;Parent=gene-L2557_RS16885;Dbxref=GenBank:WP_235410228.1;Name=WP_235410228.1;Ontology_term=GO:0005509,GO:0005615;end_range=1094,.;gbkey=CDS;go_component=extracellular space|0005615||IEA;go_function=calcium ion binding|0005509||IEA;inference=COORDINATES: protein motif:HMM:NF020137.6;locus_tag=L2557_RS16885;partial=true;product=M10 family metallopeptidase C-terminal domain-containing protein;protein_id=WP_235410228.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000333.1 1 2202 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000333.1 RefSeq region 1 2202 . + . ID=NZ_JAIKUA010000333.1:1..2202;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000333.1 RefSeq gene 205 2001 . - . ID=gene-L2557_RS16890;Name=L2557_RS16890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16890 NZ_JAIKUA010000333.1 Protein Homology CDS 205 2001 . - 0 ID=cds-WP_099660260.1;Parent=gene-L2557_RS16890;Dbxref=GenBank:WP_099660260.1;Name=WP_099660260.1;Ontology_term=GO:0006355,GO:0005524,GO:0008134;gbkey=CDS;go_function=ATP binding|0005524||IEA,transcription factor binding|0008134||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_003839752.1;locus_tag=L2557_RS16890;product=sigma-54 interaction domain-containing protein;protein_id=WP_099660260.1;transl_table=11 ##sequence-region NZ_JAIKUA010000334.1 1 1455 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000334.1 RefSeq region 1 1455 . + . ID=NZ_JAIKUA010000334.1:1..1455;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000334.1 RefSeq gene 207 533 . - . ID=gene-L2557_RS16895;Name=L2557_RS16895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16895 NZ_JAIKUA010000334.1 GeneMarkS-2+ CDS 207 533 . - 0 ID=cds-WP_235410229.1;Parent=gene-L2557_RS16895;Dbxref=GenBank:WP_235410229.1;Name=WP_235410229.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS16895;product=adhesin;protein_id=WP_235410229.1;transl_table=11 NZ_JAIKUA010000334.1 RefSeq gene 634 951 . - . ID=gene-L2557_RS16900;Name=L2557_RS16900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16900 NZ_JAIKUA010000334.1 Protein Homology CDS 634 951 . - 0 ID=cds-WP_099660247.1;Parent=gene-L2557_RS16900;Dbxref=GenBank:WP_099660247.1;Name=WP_099660247.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303952.1;locus_tag=L2557_RS16900;product=hypothetical protein;protein_id=WP_099660247.1;transl_table=11 NZ_JAIKUA010000334.1 RefSeq pseudogene 948 1455 . - . ID=gene-L2557_RS16905;Name=L2557_RS16905;end_range=1455,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS16905;partial=true;pseudo=true NZ_JAIKUA010000334.1 Protein Homology CDS 948 1455 . - 1 ID=cds-L2557_RS16905;Parent=gene-L2557_RS16905;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1455,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147761.1;locus_tag=L2557_RS16905;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAIKUA010000335.1 1 595 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000335.1 RefSeq region 1 595 . + . ID=NZ_JAIKUA010000335.1:1..595;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000336.1 1 4204 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000336.1 RefSeq region 1 4204 . + . ID=NZ_JAIKUA010000336.1:1..4204;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000336.1 RefSeq gene 520 1659 . + . ID=gene-L2557_RS16910;Name=L2557_RS16910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16910 NZ_JAIKUA010000336.1 Protein Homology CDS 520 1659 . + 0 ID=cds-WP_099660044.1;Parent=gene-L2557_RS16910;Dbxref=GenBank:WP_099660044.1;Name=WP_099660044.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004127751.1;locus_tag=L2557_RS16910;product=slipin family protein;protein_id=WP_099660044.1;transl_table=11 NZ_JAIKUA010000336.1 RefSeq gene 1656 2879 . + . ID=gene-L2557_RS16915;Name=L2557_RS16915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16915 NZ_JAIKUA010000336.1 Protein Homology CDS 1656 2879 . + 0 ID=cds-WP_099659919.1;Parent=gene-L2557_RS16915;Dbxref=GenBank:WP_099659919.1;Name=WP_099659919.1;Ontology_term=GO:0006396,GO:0008452;gbkey=CDS;go_function=RNA ligase activity|0008452||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534901.1;locus_tag=L2557_RS16915;product=RtcB family protein;protein_id=WP_099659919.1;transl_table=11 NZ_JAIKUA010000336.1 RefSeq gene 3313 3873 . - . ID=gene-L2557_RS16920;Name=mrpI;gbkey=Gene;gene=mrpI;gene_biotype=protein_coding;locus_tag=L2557_RS16920 NZ_JAIKUA010000336.1 Protein Homology CDS 3313 3873 . - 0 ID=cds-WP_075673415.1;Parent=gene-L2557_RS16920;Dbxref=GenBank:WP_075673415.1;Name=WP_075673415.1;gbkey=CDS;gene=mrpI;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534900.1;locus_tag=L2557_RS16920;product=phase variation DNA invertase MrpI;protein_id=WP_075673415.1;transl_table=11 ##sequence-region NZ_JAIKUA010000337.1 1 949 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000337.1 RefSeq region 1 949 . + . ID=NZ_JAIKUA010000337.1:1..949;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000337.1 RefSeq gene 187 924 . - . ID=gene-L2557_RS16925;Name=L2557_RS16925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16925 NZ_JAIKUA010000337.1 Protein Homology CDS 187 924 . - 0 ID=cds-WP_180272991.1;Parent=gene-L2557_RS16925;Dbxref=GenBank:WP_180272991.1;Name=WP_180272991.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004263461.1;locus_tag=L2557_RS16925;product=ankyrin repeat domain-containing protein;protein_id=WP_180272991.1;transl_table=11 ##sequence-region NZ_JAIKUA010000338.1 1 2485 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000338.1 RefSeq region 1 2485 . + . ID=NZ_JAIKUA010000338.1:1..2485;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000338.1 RefSeq gene 1 723 . + . ID=gene-L2557_RS16930;Name=L2557_RS16930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16930;partial=true;start_range=.,1 NZ_JAIKUA010000338.1 GeneMarkS-2+ CDS 1 723 . + 0 ID=cds-WP_235410230.1;Parent=gene-L2557_RS16930;Dbxref=GenBank:WP_235410230.1;Name=WP_235410230.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS16930;partial=true;product=hypothetical protein;protein_id=WP_235410230.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000338.1 RefSeq gene 1029 1556 . - . ID=gene-L2557_RS16935;Name=L2557_RS16935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16935 NZ_JAIKUA010000338.1 Protein Homology CDS 1029 1556 . - 0 ID=cds-WP_075671501.1;Parent=gene-L2557_RS16935;Dbxref=GenBank:WP_075671501.1;Name=WP_075671501.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367870.1;locus_tag=L2557_RS16935;product=SMI1/KNR4 family protein;protein_id=WP_075671501.1;transl_table=11 NZ_JAIKUA010000338.1 RefSeq gene 1694 2449 . + . ID=gene-L2557_RS16940;Name=L2557_RS16940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16940 NZ_JAIKUA010000338.1 Protein Homology CDS 1694 2449 . + 0 ID=cds-WP_235410231.1;Parent=gene-L2557_RS16940;Dbxref=GenBank:WP_235410231.1;Name=WP_235410231.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535390.1;locus_tag=L2557_RS16940;product=hypothetical protein;protein_id=WP_235410231.1;transl_table=11 ##sequence-region NZ_JAIKUA010000339.1 1 859 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000339.1 RefSeq region 1 859 . + . ID=NZ_JAIKUA010000339.1:1..859;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000339.1 RefSeq gene 173 859 . - . ID=gene-L2557_RS16945;Name=L2557_RS16945;end_range=859,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16945;partial=true NZ_JAIKUA010000339.1 GeneMarkS-2+ CDS 173 859 . - 0 ID=cds-WP_235410232.1;Parent=gene-L2557_RS16945;Dbxref=GenBank:WP_235410232.1;Name=WP_235410232.1;end_range=859,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS16945;partial=true;product=hypothetical protein;protein_id=WP_235410232.1;transl_table=11 ##sequence-region NZ_JAIKUA010000034.1 1 1831 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000034.1 RefSeq region 1 1831 . + . ID=NZ_JAIKUA010000034.1:1..1831;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000034.1 RefSeq gene 194 1030 . - . ID=gene-L2557_RS03350;Name=L2557_RS03350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03350 NZ_JAIKUA010000034.1 GeneMarkS-2+ CDS 194 1030 . - 0 ID=cds-WP_164530185.1;Parent=gene-L2557_RS03350;Dbxref=GenBank:WP_164530185.1;Name=WP_164530185.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS03350;product=hypothetical protein;protein_id=WP_164530185.1;transl_table=11 NZ_JAIKUA010000034.1 RefSeq gene 1320 1766 . + . ID=gene-L2557_RS03355;Name=L2557_RS03355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03355 NZ_JAIKUA010000034.1 Protein Homology CDS 1320 1766 . + 0 ID=cds-WP_075674143.1;Parent=gene-L2557_RS03355;Dbxref=GenBank:WP_075674143.1;Name=WP_075674143.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927801.1;locus_tag=L2557_RS03355;product=DUF6386 family protein;protein_id=WP_075674143.1;transl_table=11 ##sequence-region NZ_JAIKUA010000340.1 1 3073 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000340.1 RefSeq region 1 3073 . + . ID=NZ_JAIKUA010000340.1:1..3073;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000340.1 RefSeq gene 111 971 . + . ID=gene-L2557_RS16950;Name=L2557_RS16950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16950 NZ_JAIKUA010000340.1 Protein Homology CDS 111 971 . + 0 ID=cds-WP_075673320.1;Parent=gene-L2557_RS16950;Dbxref=GenBank:WP_075673320.1;Name=WP_075673320.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019082256.1;locus_tag=L2557_RS16950;product=SIS domain-containing protein;protein_id=WP_075673320.1;transl_table=11 NZ_JAIKUA010000340.1 RefSeq gene 1121 2665 . + . ID=gene-L2557_RS16955;Name=L2557_RS16955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16955 NZ_JAIKUA010000340.1 Protein Homology CDS 1121 2665 . + 0 ID=cds-WP_075673319.1;Parent=gene-L2557_RS16955;Dbxref=GenBank:WP_075673319.1;Name=WP_075673319.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0016020,GO:0098561;gbkey=CDS;go_component=membrane|0016020||IEA,methyl accepting chemotaxis protein complex|0098561||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368517.1;locus_tag=L2557_RS16955;product=methyl-accepting chemotaxis protein;protein_id=WP_075673319.1;transl_table=11 NZ_JAIKUA010000340.1 RefSeq pseudogene 2765 3073 . - . ID=gene-L2557_RS16960;Name=L2557_RS16960;end_range=3073,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS16960;partial=true;pseudo=true NZ_JAIKUA010000340.1 Protein Homology CDS 2765 3073 . - 0 ID=cds-L2557_RS16960;Parent=gene-L2557_RS16960;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=3073,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368515.1;locus_tag=L2557_RS16960;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAIKUA010000341.1 1 1580 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000341.1 RefSeq region 1 1580 . + . ID=NZ_JAIKUA010000341.1:1..1580;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000341.1 RefSeq gene 115 1580 . + . ID=gene-L2557_RS16965;Name=L2557_RS16965;end_range=1580,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16965;partial=true NZ_JAIKUA010000341.1 Protein Homology CDS 115 1580 . + 0 ID=cds-WP_235410233.1;Parent=gene-L2557_RS16965;Dbxref=GenBank:WP_235410233.1;Name=WP_235410233.1;Ontology_term=GO:0007165,GO:0016020;end_range=1580,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368515.1;locus_tag=L2557_RS16965;partial=true;product=methyl-accepting chemotaxis protein;protein_id=WP_235410233.1;transl_table=11 ##sequence-region NZ_JAIKUA010000342.1 1 915 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000342.1 RefSeq region 1 915 . + . ID=NZ_JAIKUA010000342.1:1..915;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000342.1 RefSeq gene 1 259 . - . ID=gene-L2557_RS16970;Name=L2557_RS16970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16970;partial=true;start_range=.,1 NZ_JAIKUA010000342.1 Protein Homology CDS 1 259 . - 0 ID=cds-WP_235410234.1;Parent=gene-L2557_RS16970;Dbxref=GenBank:WP_235410234.1;Name=WP_235410234.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368487.1;locus_tag=L2557_RS16970;partial=true;product=FimD/PapC N-terminal domain-containing protein;protein_id=WP_235410234.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000342.1 RefSeq gene 296 915 . - . ID=gene-L2557_RS16975;Name=L2557_RS16975;end_range=915,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS16975;partial=true NZ_JAIKUA010000342.1 Protein Homology CDS 296 915 . - 2 ID=cds-WP_235410235.1;Parent=gene-L2557_RS16975;Dbxref=GenBank:WP_235410235.1;Name=WP_235410235.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;end_range=915,.;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628494.1;locus_tag=L2557_RS16975;partial=true;product=fimbrial biogenesis chaperone;protein_id=WP_235410235.1;transl_table=11 ##sequence-region NZ_JAIKUA010000343.1 1 3874 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000343.1 RefSeq region 1 3874 . + . ID=NZ_JAIKUA010000343.1:1..3874;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000343.1 RefSeq gene 242 2869 . + . ID=gene-L2557_RS16980;Name=alaS;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=L2557_RS16980 NZ_JAIKUA010000343.1 Protein Homology CDS 242 2869 . + 0 ID=cds-WP_156733087.1;Parent=gene-L2557_RS16980;Dbxref=GenBank:WP_156733087.1;Name=WP_156733087.1;Ontology_term=GO:0006419,GO:0000166,GO:0004813,GO:0005737;gbkey=CDS;gene=alaS;go_component=cytoplasm|0005737||IEA;go_function=nucleotide binding|0000166||IEA,alanine-tRNA ligase activity|0004813||IEA;go_process=alanyl-tRNA aminoacylation|0006419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011145575.1;locus_tag=L2557_RS16980;product=alanine--tRNA ligase;protein_id=WP_156733087.1;transl_table=11 NZ_JAIKUA010000343.1 RefSeq gene 3091 3279 . + . ID=gene-L2557_RS16985;Name=csrA;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=L2557_RS16985 NZ_JAIKUA010000343.1 Protein Homology CDS 3091 3279 . + 0 ID=cds-WP_004244778.1;Parent=gene-L2557_RS16985;Dbxref=GenBank:WP_004244778.1;Name=WP_004244778.1;gbkey=CDS;gene=csrA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244778.1;locus_tag=L2557_RS16985;product=carbon storage regulator CsrA;protein_id=WP_004244778.1;transl_table=11 NZ_JAIKUA010000343.1 RefSeq gene 3744 3836 . + . ID=gene-L2557_RS16990;Name=L2557_RS16990;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS16990 NZ_JAIKUA010000343.1 tRNAscan-SE tRNA 3744 3836 . + . ID=rna-L2557_RS16990;Parent=gene-L2557_RS16990;anticodon=(pos:3778..3780);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS16990;product=tRNA-Ser NZ_JAIKUA010000343.1 tRNAscan-SE exon 3744 3836 . + . ID=exon-L2557_RS16990-1;Parent=rna-L2557_RS16990;anticodon=(pos:3778..3780);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS16990;product=tRNA-Ser ##sequence-region NZ_JAIKUA010000344.1 1 3325 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000344.1 RefSeq region 1 3325 . + . ID=NZ_JAIKUA010000344.1:1..3325;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000344.1 RefSeq gene 36 111 . + . ID=gene-L2557_RS16995;Name=L2557_RS16995;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS16995 NZ_JAIKUA010000344.1 tRNAscan-SE tRNA 36 111 . + . ID=rna-L2557_RS16995;Parent=gene-L2557_RS16995;anticodon=(pos:69..71);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS16995;product=tRNA-Trp NZ_JAIKUA010000344.1 tRNAscan-SE exon 36 111 . + . ID=exon-L2557_RS16995-1;Parent=rna-L2557_RS16995;anticodon=(pos:69..71);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS16995;product=tRNA-Trp NZ_JAIKUA010000344.1 RefSeq gene 360 1181 . - . ID=gene-L2557_RS17000;Name=hdfR;gbkey=Gene;gene=hdfR;gene_biotype=protein_coding;locus_tag=L2557_RS17000 NZ_JAIKUA010000344.1 Protein Homology CDS 360 1181 . - 0 ID=cds-WP_075674375.1;Parent=gene-L2557_RS17000;Dbxref=GenBank:WP_075674375.1;Name=WP_075674375.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=hdfR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827033.1;locus_tag=L2557_RS17000;product=HTH-type transcriptional regulator HdfR;protein_id=WP_075674375.1;transl_table=11 NZ_JAIKUA010000344.1 RefSeq gene 1297 1635 . + . ID=gene-L2557_RS17005;Name=L2557_RS17005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17005 NZ_JAIKUA010000344.1 Protein Homology CDS 1297 1635 . + 0 ID=cds-WP_072070866.1;Parent=gene-L2557_RS17005;Dbxref=GenBank:WP_072070866.1;Name=WP_072070866.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312726.1;locus_tag=L2557_RS17005;product=MaoP family protein;protein_id=WP_072070866.1;transl_table=11 NZ_JAIKUA010000344.1 RefSeq gene 1682 3214 . - . ID=gene-L2557_RS17010;Name=L2557_RS17010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17010 NZ_JAIKUA010000344.1 Protein Homology CDS 1682 3214 . - 0 ID=cds-WP_099660304.1;Parent=gene-L2557_RS17010;Dbxref=GenBank:WP_099660304.1;Name=WP_099660304.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017627863.1;locus_tag=L2557_RS17010;product=YifB family Mg chelatase-like AAA ATPase;protein_id=WP_099660304.1;transl_table=11 ##sequence-region NZ_JAIKUA010000345.1 1 384 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000345.1 RefSeq region 1 384 . + . ID=NZ_JAIKUA010000345.1:1..384;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000345.1 RefSeq pseudogene 155 384 . - . ID=gene-L2557_RS17015;Name=L2557_RS17015;end_range=384,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17015;partial=true;pseudo=true NZ_JAIKUA010000345.1 Protein Homology CDS 155 384 . - 2 ID=cds-L2557_RS17015;Parent=gene-L2557_RS17015;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=384,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628001.1;locus_tag=L2557_RS17015;partial=true;product=alpha-xenorhabdolysin family binary toxin subunit A;pseudo=true;transl_table=11 ##sequence-region NZ_JAIKUA010000346.1 1 5673 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000346.1 RefSeq region 1 5673 . + . ID=NZ_JAIKUA010000346.1:1..5673;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000346.1 RefSeq gene 334 825 . + . ID=gene-L2557_RS17020;Name=L2557_RS17020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17020 NZ_JAIKUA010000346.1 Protein Homology CDS 334 825 . + 0 ID=cds-WP_223673487.1;Parent=gene-L2557_RS17020;Dbxref=GenBank:WP_223673487.1;Name=WP_223673487.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248519.1;locus_tag=L2557_RS17020;product=hypothetical protein;protein_id=WP_223673487.1;transl_table=11 NZ_JAIKUA010000346.1 RefSeq gene 831 3530 . + . ID=gene-L2557_RS17025;Name=L2557_RS17025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17025 NZ_JAIKUA010000346.1 Protein Homology CDS 831 3530 . + 0 ID=cds-WP_235410236.1;Parent=gene-L2557_RS17025;Dbxref=GenBank:WP_235410236.1;Name=WP_235410236.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827167.1;locus_tag=L2557_RS17025;product=sugar transporter;protein_id=WP_235410236.1;transl_table=11 NZ_JAIKUA010000346.1 RefSeq gene 3590 4465 . - . ID=gene-L2557_RS17030;Name=L2557_RS17030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17030 NZ_JAIKUA010000346.1 Protein Homology CDS 3590 4465 . - 0 ID=cds-WP_223673490.1;Parent=gene-L2557_RS17030;Dbxref=GenBank:WP_223673490.1;Name=WP_223673490.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533657.1;locus_tag=L2557_RS17030;product=T3SS regulon anti-activator ExsD domain-containing protein;protein_id=WP_223673490.1;transl_table=11 NZ_JAIKUA010000346.1 RefSeq gene 4550 5386 . - . ID=gene-L2557_RS17035;Name=L2557_RS17035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17035 NZ_JAIKUA010000346.1 Protein Homology CDS 4550 5386 . - 0 ID=cds-WP_075670890.1;Parent=gene-L2557_RS17035;Dbxref=GenBank:WP_075670890.1;Name=WP_075670890.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244000.1;locus_tag=L2557_RS17035;product=helix-turn-helix transcriptional regulator;protein_id=WP_075670890.1;transl_table=11 ##sequence-region NZ_JAIKUA010000347.1 1 226 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000347.1 RefSeq region 1 226 . + . ID=NZ_JAIKUA010000347.1:1..226;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000348.1 1 866 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000348.1 RefSeq region 1 866 . + . ID=NZ_JAIKUA010000348.1:1..866;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000348.1 RefSeq gene 24 290 . - . ID=gene-L2557_RS17040;Name=L2557_RS17040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17040 NZ_JAIKUA010000348.1 Protein Homology CDS 24 290 . - 0 ID=cds-WP_235410237.1;Parent=gene-L2557_RS17040;Dbxref=GenBank:WP_235410237.1;Name=WP_235410237.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023251.6;locus_tag=L2557_RS17040;product=putative Se/S carrier-like protein;protein_id=WP_235410237.1;transl_table=11 NZ_JAIKUA010000348.1 RefSeq gene 265 866 . - . ID=gene-L2557_RS17045;Name=yedE;end_range=866,.;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=L2557_RS17045;partial=true NZ_JAIKUA010000348.1 Protein Homology CDS 265 866 . - 2 ID=cds-WP_235410238.1;Parent=gene-L2557_RS17045;Dbxref=GenBank:WP_235410238.1;Name=WP_235410238.1;end_range=866,.;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237334.1;locus_tag=L2557_RS17045;partial=true;product=YedE family putative selenium transporter;protein_id=WP_235410238.1;transl_table=11 ##sequence-region NZ_JAIKUA010000349.1 1 297 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000349.1 RefSeq region 1 297 . + . ID=NZ_JAIKUA010000349.1:1..297;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000035.1 1 15350 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000035.1 RefSeq region 1 15350 . + . ID=NZ_JAIKUA010000035.1:1..15350;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000035.1 RefSeq gene 424 1983 . + . ID=gene-L2557_RS03360;Name=leuA;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=L2557_RS03360 NZ_JAIKUA010000035.1 Protein Homology CDS 424 1983 . + 0 ID=cds-WP_075670761.1;Parent=gene-L2557_RS03360;Dbxref=GenBank:WP_075670761.1;Name=WP_075670761.1;Ontology_term=GO:0019752,GO:0003852;gbkey=CDS;gene=leuA;go_function=2-isopropylmalate synthase activity|0003852||IEA;go_process=carboxylic acid metabolic process|0019752||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005196.1;locus_tag=L2557_RS03360;product=2-isopropylmalate synthase;protein_id=WP_075670761.1;transl_table=11 NZ_JAIKUA010000035.1 RefSeq gene 1986 3077 . + . ID=gene-L2557_RS03365;Name=leuB;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=L2557_RS03365 NZ_JAIKUA010000035.1 Protein Homology CDS 1986 3077 . + 0 ID=cds-WP_099659305.1;Parent=gene-L2557_RS03365;Dbxref=GenBank:WP_099659305.1;Name=WP_099659305.1;Ontology_term=GO:0009098,GO:0003862;gbkey=CDS;gene=leuB;go_function=3-isopropylmalate dehydrogenase activity|0003862||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244138.1;locus_tag=L2557_RS03365;product=3-isopropylmalate dehydrogenase;protein_id=WP_099659305.1;transl_table=11 NZ_JAIKUA010000035.1 RefSeq gene 3079 4488 . + . ID=gene-L2557_RS03370;Name=leuC;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=L2557_RS03370 NZ_JAIKUA010000035.1 Protein Homology CDS 3079 4488 . + 0 ID=cds-WP_075670757.1;Parent=gene-L2557_RS03370;Dbxref=GenBank:WP_075670757.1;Name=WP_075670757.1;Ontology_term=GO:0009098,GO:0003861,GO:0051539,GO:0009316;gbkey=CDS;gene=leuC;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244139.1;locus_tag=L2557_RS03370;product=3-isopropylmalate dehydratase large subunit;protein_id=WP_075670757.1;transl_table=11 NZ_JAIKUA010000035.1 RefSeq gene 4497 5102 . + . ID=gene-L2557_RS03375;Name=leuD;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=L2557_RS03375 NZ_JAIKUA010000035.1 Protein Homology CDS 4497 5102 . + 0 ID=cds-WP_099659304.1;Parent=gene-L2557_RS03375;Dbxref=GenBank:WP_099659304.1;Name=WP_099659304.1;Ontology_term=GO:0009098,GO:0003861,GO:0009316;gbkey=CDS;gene=leuD;go_component=3-isopropylmalate dehydratase complex|0009316||IEA;go_function=3-isopropylmalate dehydratase activity|0003861||IEA;go_process=L-leucine biosynthetic process|0009098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459115.1;locus_tag=L2557_RS03375;product=3-isopropylmalate dehydratase small subunit;protein_id=WP_099659304.1;transl_table=11 NZ_JAIKUA010000035.1 RefSeq gene 5392 7065 . + . ID=gene-L2557_RS03380;Name=sgrR;gbkey=Gene;gene=sgrR;gene_biotype=protein_coding;locus_tag=L2557_RS03380 NZ_JAIKUA010000035.1 Protein Homology CDS 5392 7065 . + 0 ID=cds-WP_075670753.1;Parent=gene-L2557_RS03380;Dbxref=GenBank:WP_075670753.1;Name=WP_075670753.1;gbkey=CDS;gene=sgrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004262062.1;locus_tag=L2557_RS03380;product=HTH-type transcriptional regulator SgrR;protein_id=WP_075670753.1;transl_table=11 NZ_JAIKUA010000035.1 RefSeq gene 7689 8366 . + . ID=gene-L2557_RS03385;Name=mutH;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=L2557_RS03385 NZ_JAIKUA010000035.1 Protein Homology CDS 7689 8366 . + 0 ID=cds-WP_099659302.1;Parent=gene-L2557_RS03385;Dbxref=GenBank:WP_099659302.1;Name=WP_099659302.1;Ontology_term=GO:0006304,GO:0004519;gbkey=CDS;gene=mutH;go_function=endonuclease activity|0004519||IEA;go_process=DNA modification|0006304||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533777.1;locus_tag=L2557_RS03385;product=DNA mismatch repair endonuclease MutH;protein_id=WP_099659302.1;transl_table=11 NZ_JAIKUA010000035.1 RefSeq gene 8469 9389 . - . ID=gene-L2557_RS03390;Name=speB;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=L2557_RS03390 NZ_JAIKUA010000035.1 Protein Homology CDS 8469 9389 . - 0 ID=cds-WP_099659301.1;Parent=gene-L2557_RS03390;Dbxref=GenBank:WP_099659301.1;Name=WP_099659301.1;Ontology_term=GO:0008295,GO:0008783;gbkey=CDS;gene=speB;go_function=agmatinase activity|0008783||IEA;go_process=spermidine biosynthetic process|0008295||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250334.1;locus_tag=L2557_RS03390;product=agmatinase;protein_id=WP_099659301.1;transl_table=11 NZ_JAIKUA010000035.1 RefSeq gene 9493 11400 . - . ID=gene-L2557_RS03395;Name=speA;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=L2557_RS03395 NZ_JAIKUA010000035.1 Protein Homology CDS 9493 11400 . - 0 ID=cds-WP_075670749.1;Parent=gene-L2557_RS03395;Dbxref=GenBank:WP_075670749.1;Name=WP_075670749.1;Ontology_term=GO:0006527,GO:0008792;gbkey=CDS;gene=speA;go_function=arginine decarboxylase activity|0008792||IEA;go_process=L-arginine catabolic process|0006527||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244147.1;locus_tag=L2557_RS03395;product=biosynthetic arginine decarboxylase;protein_id=WP_075670749.1;transl_table=11 NZ_JAIKUA010000035.1 RefSeq gene 12090 13244 . + . ID=gene-L2557_RS03400;Name=metK;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=L2557_RS03400 NZ_JAIKUA010000035.1 Protein Homology CDS 12090 13244 . + 0 ID=cds-WP_075670747.1;Parent=gene-L2557_RS03400;Dbxref=GenBank:WP_075670747.1;Name=WP_075670747.1;Ontology_term=GO:0006556,GO:0004478,GO:0005524;gbkey=CDS;gene=metK;go_function=methionine adenosyltransferase activity|0004478||IEA,ATP binding|0005524||IEA;go_process=S-adenosylmethionine biosynthetic process|0006556||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311845.1;locus_tag=L2557_RS03400;product=methionine adenosyltransferase;protein_id=WP_075670747.1;transl_table=11 NZ_JAIKUA010000035.1 RefSeq gene 13421 15154 . - . ID=gene-L2557_RS03405;Name=bcsG;gbkey=Gene;gene=bcsG;gene_biotype=protein_coding;locus_tag=L2557_RS03405 NZ_JAIKUA010000035.1 Protein Homology CDS 13421 15154 . - 0 ID=cds-WP_235409818.1;Parent=gene-L2557_RS03405;Dbxref=GenBank:WP_235409818.1;Name=WP_235409818.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsG;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004699573.1;locus_tag=L2557_RS03405;product=cellulose biosynthesis protein BcsG;protein_id=WP_235409818.1;transl_table=11 ##sequence-region NZ_JAIKUA010000350.1 1 4184 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000350.1 RefSeq region 1 4184 . + . ID=NZ_JAIKUA010000350.1:1..4184;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000350.1 RefSeq gene 228 1394 . - . ID=gene-L2557_RS17050;Name=L2557_RS17050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17050 NZ_JAIKUA010000350.1 GeneMarkS-2+ CDS 228 1394 . - 0 ID=cds-WP_075674300.1;Parent=gene-L2557_RS17050;Dbxref=GenBank:WP_075674300.1;Name=WP_075674300.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17050;product=hypothetical protein;protein_id=WP_075674300.1;transl_table=11 NZ_JAIKUA010000350.1 RefSeq gene 1430 4015 . - . ID=gene-L2557_RS17055;Name=L2557_RS17055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17055 NZ_JAIKUA010000350.1 Protein Homology CDS 1430 4015 . - 0 ID=cds-WP_223673692.1;Parent=gene-L2557_RS17055;Dbxref=GenBank:WP_223673692.1;Name=WP_223673692.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656926.1;locus_tag=L2557_RS17055;product=fimbria/pilus outer membrane usher protein;protein_id=WP_223673692.1;transl_table=11 ##sequence-region NZ_JAIKUA010000351.1 1 8180 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000351.1 RefSeq region 1 8180 . + . ID=NZ_JAIKUA010000351.1:1..8180;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000351.1 RefSeq gene 1 441 . - . ID=gene-L2557_RS17060;Name=L2557_RS17060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17060;partial=true;start_range=.,1 NZ_JAIKUA010000351.1 GeneMarkS-2+ CDS 1 441 . - 0 ID=cds-WP_235410239.1;Parent=gene-L2557_RS17060;Dbxref=GenBank:WP_235410239.1;Name=WP_235410239.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17060;partial=true;product=hypothetical protein;protein_id=WP_235410239.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000351.1 RefSeq gene 419 883 . - . ID=gene-L2557_RS17065;Name=L2557_RS17065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17065 NZ_JAIKUA010000351.1 Protein Homology CDS 419 883 . - 0 ID=cds-WP_075673514.1;Parent=gene-L2557_RS17065;Dbxref=GenBank:WP_075673514.1;Name=WP_075673514.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536285.1;locus_tag=L2557_RS17065;product=type III secretion protein;protein_id=WP_075673514.1;transl_table=11 NZ_JAIKUA010000351.1 RefSeq gene 867 2168 . - . ID=gene-L2557_RS17070;Name=sctN;gbkey=Gene;gene=sctN;gene_biotype=protein_coding;locus_tag=L2557_RS17070 NZ_JAIKUA010000351.1 Protein Homology CDS 867 2168 . - 0 ID=cds-WP_099660487.1;Parent=gene-L2557_RS17070;Dbxref=GenBank:WP_099660487.1;Name=WP_099660487.1;gbkey=CDS;gene=sctN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628508.1;locus_tag=L2557_RS17070;product=type III secretion system ATPase SctN;protein_id=WP_099660487.1;transl_table=11 NZ_JAIKUA010000351.1 RefSeq gene 2172 2585 . - . ID=gene-L2557_RS17075;Name=L2557_RS17075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17075 NZ_JAIKUA010000351.1 Protein Homology CDS 2172 2585 . - 0 ID=cds-WP_075673516.1;Parent=gene-L2557_RS17075;Dbxref=GenBank:WP_075673516.1;Name=WP_075673516.1;Ontology_term=GO:0030254;gbkey=CDS;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245838.1;locus_tag=L2557_RS17075;product=InvB/SpaK family type III secretion system chaperone;protein_id=WP_075673516.1;transl_table=11 NZ_JAIKUA010000351.1 RefSeq gene 2594 4699 . - . ID=gene-L2557_RS17080;Name=L2557_RS17080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17080 NZ_JAIKUA010000351.1 Protein Homology CDS 2594 4699 . - 0 ID=cds-WP_235410240.1;Parent=gene-L2557_RS17080;Dbxref=GenBank:WP_235410240.1;Name=WP_235410240.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249202.1;locus_tag=L2557_RS17080;product=EscV/YscV/HrcV family type III secretion system export apparatus protein;protein_id=WP_235410240.1;transl_table=11 NZ_JAIKUA010000351.1 RefSeq gene 4725 5801 . - . ID=gene-L2557_RS17085;Name=sctW;gbkey=Gene;gene=sctW;gene_biotype=protein_coding;locus_tag=L2557_RS17085 NZ_JAIKUA010000351.1 Protein Homology CDS 4725 5801 . - 0 ID=cds-WP_235410241.1;Parent=gene-L2557_RS17085;Dbxref=GenBank:WP_235410241.1;Name=WP_235410241.1;Ontology_term=GO:0030254,GO:0050709,GO:0009986;gbkey=CDS;gene=sctW;go_component=cell surface|0009986||IEA;go_process=protein secretion by the type III secretion system|0030254||IEA,negative regulation of protein secretion|0050709||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245840.1;locus_tag=L2557_RS17085;product=type III secretion system gatekeeper subunit SctW;protein_id=WP_235410241.1;transl_table=11 NZ_JAIKUA010000351.1 RefSeq gene 5806 7518 . - . ID=gene-L2557_RS17090;Name=sctC;gbkey=Gene;gene=sctC;gene_biotype=protein_coding;locus_tag=L2557_RS17090 NZ_JAIKUA010000351.1 Protein Homology CDS 5806 7518 . - 0 ID=cds-WP_099660488.1;Parent=gene-L2557_RS17090;Dbxref=GenBank:WP_099660488.1;Name=WP_099660488.1;Ontology_term=GO:0030254;gbkey=CDS;gene=sctC;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: protein motif:HMM:TIGR02516.1;locus_tag=L2557_RS17090;product=type III secretion system outer membrane ring subunit SctC;protein_id=WP_099660488.1;transl_table=11 NZ_JAIKUA010000351.1 RefSeq gene 7502 8180 . - . ID=gene-L2557_RS17095;Name=L2557_RS17095;end_range=8180,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17095;partial=true NZ_JAIKUA010000351.1 Protein Homology CDS 7502 8180 . - 1 ID=cds-WP_235410242.1;Parent=gene-L2557_RS17095;Dbxref=GenBank:WP_235410242.1;Name=WP_235410242.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;end_range=8180,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245842.1;locus_tag=L2557_RS17095;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_235410242.1;transl_table=11 ##sequence-region NZ_JAIKUA010000352.1 1 1999 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000352.1 RefSeq region 1 1999 . + . ID=NZ_JAIKUA010000352.1:1..1999;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000352.1 RefSeq pseudogene 1 201 . - . ID=gene-L2557_RS17100;Name=L2557_RS17100;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17100;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000352.1 Protein Homology CDS 1 201 . - 0 ID=cds-L2557_RS17100;Parent=gene-L2557_RS17100;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827048.1;locus_tag=L2557_RS17100;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAIKUA010000352.1 RefSeq gene 606 1655 . + . ID=gene-L2557_RS17105;Name=allD;gbkey=Gene;gene=allD;gene_biotype=protein_coding;locus_tag=L2557_RS17105 NZ_JAIKUA010000352.1 Protein Homology CDS 606 1655 . + 0 ID=cds-WP_099659773.1;Parent=gene-L2557_RS17105;Dbxref=GenBank:WP_099659773.1;Name=WP_099659773.1;Ontology_term=GO:0016491;gbkey=CDS;gene=allD;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537442.1;locus_tag=L2557_RS17105;product=ureidoglycolate dehydrogenase;protein_id=WP_099659773.1;transl_table=11 ##sequence-region NZ_JAIKUA010000353.1 1 4541 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000353.1 RefSeq region 1 4541 . + . ID=NZ_JAIKUA010000353.1:1..4541;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000353.1 RefSeq pseudogene 1 367 . + . ID=gene-L2557_RS17110;Name=L2557_RS17110;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17110;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000353.1 Protein Homology CDS 1 367 . + 1 ID=cds-L2557_RS17110;Parent=gene-L2557_RS17110;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827056.1;locus_tag=L2557_RS17110;partial=true;product=acetyltransferase;pseudo=true;start_range=.,1;transl_table=11 NZ_JAIKUA010000353.1 RefSeq gene 546 4391 . - . ID=gene-L2557_RS17115;Name=L2557_RS17115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17115 NZ_JAIKUA010000353.1 Protein Homology CDS 546 4391 . - 0 ID=cds-WP_235410243.1;Parent=gene-L2557_RS17115;Dbxref=GenBank:WP_235410243.1;Name=WP_235410243.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: protein motif:HMM:TIGR01414.1;locus_tag=L2557_RS17115;product=autotransporter outer membrane beta-barrel domain-containing protein;protein_id=WP_235410243.1;transl_table=11 ##sequence-region NZ_JAIKUA010000354.1 1 1193 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000354.1 RefSeq region 1 1193 . + . ID=NZ_JAIKUA010000354.1:1..1193;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000354.1 RefSeq gene 1 994 . - . ID=gene-L2557_RS17120;Name=L2557_RS17120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17120;partial=true;start_range=.,1 NZ_JAIKUA010000354.1 GeneMarkS-2+ CDS 1 994 . - 0 ID=cds-WP_235410244.1;Parent=gene-L2557_RS17120;Dbxref=GenBank:WP_235410244.1;Name=WP_235410244.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17120;partial=true;product=YiiG family protein;protein_id=WP_235410244.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000355.1 1 3574 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000355.1 RefSeq region 1 3574 . + . ID=NZ_JAIKUA010000355.1:1..3574;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000355.1 RefSeq gene 33 788 . + . ID=gene-L2557_RS17125;Name=modA;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=L2557_RS17125 NZ_JAIKUA010000355.1 Protein Homology CDS 33 788 . + 0 ID=cds-WP_075674266.1;Parent=gene-L2557_RS17125;Dbxref=GenBank:WP_075674266.1;Name=WP_075674266.1;Ontology_term=GO:0015689,GO:0015412,GO:0030973,GO:0030288,GO:0055052;gbkey=CDS;gene=modA;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ABC-type molybdate transporter activity|0015412||IEA,molybdate ion binding|0030973||IEA;go_process=molybdate ion transport|0015689||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250908.1;locus_tag=L2557_RS17125;product=molybdate ABC transporter substrate-binding protein;protein_id=WP_075674266.1;transl_table=11 NZ_JAIKUA010000355.1 RefSeq gene 888 1664 . + . ID=gene-L2557_RS17130;Name=L2557_RS17130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17130 NZ_JAIKUA010000355.1 Protein Homology CDS 888 1664 . + 0 ID=cds-WP_099660549.1;Parent=gene-L2557_RS17130;Dbxref=GenBank:WP_099660549.1;Name=WP_099660549.1;Ontology_term=GO:0055085,GO:0042626,GO:0016020,GO:0043190;gbkey=CDS;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628046.1;locus_tag=L2557_RS17130;product=ABC transporter permease;protein_id=WP_099660549.1;transl_table=11 NZ_JAIKUA010000355.1 RefSeq gene 1658 2284 . + . ID=gene-L2557_RS17135;Name=L2557_RS17135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17135 NZ_JAIKUA010000355.1 Protein Homology CDS 1658 2284 . + 0 ID=cds-WP_099660548.1;Parent=gene-L2557_RS17135;Dbxref=GenBank:WP_099660548.1;Name=WP_099660548.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368025.1;locus_tag=L2557_RS17135;product=ABC transporter ATP-binding protein;protein_id=WP_099660548.1;transl_table=11 NZ_JAIKUA010000355.1 RefSeq gene 2306 2998 . - . ID=gene-L2557_RS17140;Name=L2557_RS17140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17140 NZ_JAIKUA010000355.1 Protein Homology CDS 2306 2998 . - 0 ID=cds-WP_075674269.1;Parent=gene-L2557_RS17140;Dbxref=GenBank:WP_075674269.1;Name=WP_075674269.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243309.1;locus_tag=L2557_RS17140;product=XRE family transcriptional regulator;protein_id=WP_075674269.1;transl_table=11 NZ_JAIKUA010000355.1 RefSeq gene 3109 3366 . - . ID=gene-L2557_RS17145;Name=L2557_RS17145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17145 NZ_JAIKUA010000355.1 Protein Homology CDS 3109 3366 . - 0 ID=cds-WP_075674270.1;Parent=gene-L2557_RS17145;Dbxref=GenBank:WP_075674270.1;Name=WP_075674270.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243308.1;locus_tag=L2557_RS17145;product=hypothetical protein;protein_id=WP_075674270.1;transl_table=11 ##sequence-region NZ_JAIKUA010000356.1 1 3178 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000356.1 RefSeq region 1 3178 . + . ID=NZ_JAIKUA010000356.1:1..3178;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000356.1 RefSeq gene 37 735 . + . ID=gene-L2557_RS17150;Name=L2557_RS17150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17150 NZ_JAIKUA010000356.1 Protein Homology CDS 37 735 . + 0 ID=cds-WP_099660740.1;Parent=gene-L2557_RS17150;Dbxref=GenBank:WP_099660740.1;Name=WP_099660740.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: protein motif:HMM:NF012565.6;locus_tag=L2557_RS17150;product=fimbrial biogenesis chaperone;protein_id=WP_099660740.1;transl_table=11 NZ_JAIKUA010000356.1 RefSeq gene 713 1267 . + . ID=gene-L2557_RS17155;Name=L2557_RS17155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17155 NZ_JAIKUA010000356.1 Protein Homology CDS 713 1267 . + 0 ID=cds-WP_223673693.1;Parent=gene-L2557_RS17155;Dbxref=GenBank:WP_223673693.1;Name=WP_223673693.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF012635.6;locus_tag=L2557_RS17155;product=fimbrial protein;protein_id=WP_223673693.1;transl_table=11 NZ_JAIKUA010000356.1 RefSeq gene 1278 1820 . + . ID=gene-L2557_RS17160;Name=L2557_RS17160;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17160 NZ_JAIKUA010000356.1 Protein Homology CDS 1278 1820 . + 0 ID=cds-WP_075674303.1;Parent=gene-L2557_RS17160;Dbxref=GenBank:WP_075674303.1;Name=WP_075674303.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF012635.6;locus_tag=L2557_RS17160;product=fimbrial protein;protein_id=WP_075674303.1;transl_table=11 NZ_JAIKUA010000356.1 RefSeq gene 1829 2521 . + . ID=gene-L2557_RS17165;Name=L2557_RS17165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17165 NZ_JAIKUA010000356.1 Protein Homology CDS 1829 2521 . + 0 ID=cds-WP_099660738.1;Parent=gene-L2557_RS17165;Dbxref=GenBank:WP_099660738.1;Name=WP_099660738.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: protein motif:HMM:NF012565.6;locus_tag=L2557_RS17165;product=fimbrial biogenesis chaperone;protein_id=WP_099660738.1;transl_table=11 NZ_JAIKUA010000356.1 RefSeq gene 2526 3178 . + . ID=gene-L2557_RS17170;Name=L2557_RS17170;end_range=3178,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17170;partial=true NZ_JAIKUA010000356.1 Protein Homology CDS 2526 3178 . + 0 ID=cds-WP_235410245.1;Parent=gene-L2557_RS17170;Dbxref=GenBank:WP_235410245.1;Name=WP_235410245.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;end_range=3178,.;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: protein motif:HMM:NF012565.6;locus_tag=L2557_RS17170;partial=true;product=fimbrial biogenesis chaperone;protein_id=WP_235410245.1;transl_table=11 ##sequence-region NZ_JAIKUA010000357.1 1 697 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000357.1 RefSeq region 1 697 . + . ID=NZ_JAIKUA010000357.1:1..697;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000357.1 RefSeq gene 143 526 . - . ID=gene-L2557_RS17175;Name=L2557_RS17175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17175 NZ_JAIKUA010000357.1 Protein Homology CDS 143 526 . - 0 ID=cds-WP_099659342.1;Parent=gene-L2557_RS17175;Dbxref=GenBank:WP_099659342.1;Name=WP_099659342.1;Ontology_term=GO:0046872,GO:0051536;gbkey=CDS;go_function=metal ion binding|0046872||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243972.1;locus_tag=L2557_RS17175;product=YkgJ family cysteine cluster protein;protein_id=WP_099659342.1;transl_table=11 ##sequence-region NZ_JAIKUA010000358.1 1 693 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000358.1 RefSeq region 1 693 . + . ID=NZ_JAIKUA010000358.1:1..693;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000358.1 RefSeq gene 155 454 . - . ID=gene-L2557_RS17180;Name=L2557_RS17180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17180 NZ_JAIKUA010000358.1 Protein Homology CDS 155 454 . - 0 ID=cds-WP_075672888.1;Parent=gene-L2557_RS17180;Dbxref=GenBank:WP_075672888.1;Name=WP_075672888.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: protein motif:HMM:NF013540.6;locus_tag=L2557_RS17180;product=helix-turn-helix domain-containing protein;protein_id=WP_075672888.1;transl_table=11 ##sequence-region NZ_JAIKUA010000359.1 1 1053 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000359.1 RefSeq region 1 1053 . + . ID=NZ_JAIKUA010000359.1:1..1053;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000359.1 RefSeq gene 69 152 . + . ID=gene-L2557_RS17985;Name=cydH;gbkey=Gene;gene=cydH;gene_biotype=protein_coding;gene_synonym=ynhF;locus_tag=L2557_RS17985 NZ_JAIKUA010000359.1 Protein Homology CDS 69 152 . + 0 ID=cds-WP_103004765.1;Parent=gene-L2557_RS17985;Dbxref=GenBank:WP_103004765.1;Name=WP_103004765.1;gbkey=CDS;gene=cydH;inference=COORDINATES: protein motif:HMM:NF033411.1;locus_tag=L2557_RS17985;product=cytochrome bd-I oxidase subunit CydH;protein_id=WP_103004765.1;transl_table=11 NZ_JAIKUA010000359.1 RefSeq gene 290 868 . - . ID=gene-L2557_RS17185;Name=sodB;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=L2557_RS17185 NZ_JAIKUA010000359.1 Protein Homology CDS 290 868 . - 0 ID=cds-WP_072062546.1;Parent=gene-L2557_RS17185;Dbxref=GenBank:WP_072062546.1;Name=WP_072062546.1;Ontology_term=GO:0006801,GO:0004784,GO:0046872;gbkey=CDS;gene=sodB;go_function=superoxide dismutase activity|0004784||IEA,metal ion binding|0046872||IEA;go_process=superoxide metabolic process|0006801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010931119.1;locus_tag=L2557_RS17185;product=superoxide dismutase [Fe];protein_id=WP_072062546.1;transl_table=11 ##sequence-region NZ_JAIKUA010000036.1 1 25439 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000036.1 RefSeq region 1 25439 . + . ID=NZ_JAIKUA010000036.1:1..25439;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000036.1 RefSeq gene 148 1365 . + . ID=gene-L2557_RS03410;Name=dpaL;gbkey=Gene;gene=dpaL;gene_biotype=protein_coding;locus_tag=L2557_RS03410 NZ_JAIKUA010000036.1 Protein Homology CDS 148 1365 . + 0 ID=cds-WP_075672230.1;Parent=gene-L2557_RS03410;Dbxref=GenBank:WP_075672230.1;Name=WP_075672230.1;Ontology_term=GO:0008838,GO:0030170;gbkey=CDS;gene=dpaL;go_function=diaminopropionate ammonia-lyase activity|0008838||IEA,pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259682.1;locus_tag=L2557_RS03410;product=diaminopropionate ammonia-lyase;protein_id=WP_075672230.1;transl_table=11 NZ_JAIKUA010000036.1 RefSeq gene 1396 2580 . + . ID=gene-L2557_RS03415;Name=L2557_RS03415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03415 NZ_JAIKUA010000036.1 Protein Homology CDS 1396 2580 . + 0 ID=cds-WP_075672232.1;Parent=gene-L2557_RS03415;Dbxref=GenBank:WP_075672232.1;Name=WP_075672232.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259679.1;locus_tag=L2557_RS03415;product=YgeY family selenium metabolism-linked hydrolase;protein_id=WP_075672232.1;transl_table=11 NZ_JAIKUA010000036.1 RefSeq gene 2653 4239 . + . ID=gene-L2557_RS03420;Name=L2557_RS03420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03420 NZ_JAIKUA010000036.1 Protein Homology CDS 2653 4239 . + 0 ID=cds-WP_075672234.1;Parent=gene-L2557_RS03420;Dbxref=GenBank:WP_075672234.1;Name=WP_075672234.1;Ontology_term=GO:0047420;gbkey=CDS;go_function=N-acyl-D-amino-acid deacylase activity|0047420||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122999.1;locus_tag=L2557_RS03420;product=N-acyl-D-amino-acid deacylase family protein;protein_id=WP_075672234.1;transl_table=11 NZ_JAIKUA010000036.1 RefSeq gene 4335 5609 . + . ID=gene-L2557_RS03425;Name=L2557_RS03425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03425 NZ_JAIKUA010000036.1 Protein Homology CDS 4335 5609 . + 0 ID=cds-WP_075672236.1;Parent=gene-L2557_RS03425;Dbxref=GenBank:WP_075672236.1;Name=WP_075672236.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008785572.1;locus_tag=L2557_RS03425;product=MFS transporter;protein_id=WP_075672236.1;transl_table=11 NZ_JAIKUA010000036.1 RefSeq gene 5797 6408 . - . ID=gene-L2557_RS03430;Name=prfH;gbkey=Gene;gene=prfH;gene_biotype=protein_coding;locus_tag=L2557_RS03430 NZ_JAIKUA010000036.1 Protein Homology CDS 5797 6408 . - 0 ID=cds-WP_075672238.1;Parent=gene-L2557_RS03430;Dbxref=GenBank:WP_075672238.1;Name=WP_075672238.1;Ontology_term=GO:0006415,GO:0003747;gbkey=CDS;gene=prfH;go_function=translation release factor activity|0003747||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252939.1;locus_tag=L2557_RS03430;product=peptide chain release factor H;protein_id=WP_075672238.1;transl_table=11 NZ_JAIKUA010000036.1 RefSeq gene 6408 7544 . - . ID=gene-L2557_RS03435;Name=L2557_RS03435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03435 NZ_JAIKUA010000036.1 Protein Homology CDS 6408 7544 . - 0 ID=cds-WP_235409820.1;Parent=gene-L2557_RS03435;Dbxref=GenBank:WP_235409820.1;Name=WP_235409820.1;Ontology_term=GO:0006396,GO:0008452;gbkey=CDS;go_function=RNA ligase activity|0008452||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249547.1;locus_tag=L2557_RS03435;product=RNA ligase RtcB family protein;protein_id=WP_235409820.1;transl_table=11 NZ_JAIKUA010000036.1 RefSeq gene 7856 8632 . - . ID=gene-L2557_RS03440;Name=L2557_RS03440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03440 NZ_JAIKUA010000036.1 Protein Homology CDS 7856 8632 . - 0 ID=cds-WP_075672242.1;Parent=gene-L2557_RS03440;Dbxref=GenBank:WP_075672242.1;Name=WP_075672242.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246149.1;locus_tag=L2557_RS03440;product=DeoR family transcriptional regulator;protein_id=WP_075672242.1;transl_table=11 NZ_JAIKUA010000036.1 RefSeq gene 8688 9356 . - . ID=gene-L2557_RS03445;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=L2557_RS03445 NZ_JAIKUA010000036.1 Protein Homology CDS 8688 9356 . - 0 ID=cds-WP_075672244.1;Parent=gene-L2557_RS03445;Dbxref=GenBank:WP_075672244.1;Name=WP_075672244.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011094225.1;locus_tag=L2557_RS03445;product=deoxyribose-phosphate aldolase;protein_id=WP_075672244.1;transl_table=11 NZ_JAIKUA010000036.1 RefSeq gene 9536 10456 . + . ID=gene-L2557_RS03450;Name=rbsK;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=L2557_RS03450 NZ_JAIKUA010000036.1 Protein Homology CDS 9536 10456 . + 0 ID=cds-WP_075672247.1;Parent=gene-L2557_RS03450;Dbxref=GenBank:WP_075672247.1;Name=WP_075672247.1;Ontology_term=GO:0006014,GO:0004747;gbkey=CDS;gene=rbsK;go_function=ribokinase activity|0004747||IEA;go_process=D-ribose metabolic process|0006014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249546.1;locus_tag=L2557_RS03450;product=ribokinase;protein_id=WP_075672247.1;transl_table=11 NZ_JAIKUA010000036.1 RefSeq gene 10696 11610 . + . ID=gene-L2557_RS03455;Name=murQ;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;locus_tag=L2557_RS03455 NZ_JAIKUA010000036.1 Protein Homology CDS 10696 11610 . + 0 ID=cds-WP_235409821.1;Parent=gene-L2557_RS03455;Dbxref=GenBank:WP_235409821.1;Name=WP_235409821.1;Ontology_term=GO:0009254,GO:0046348,GO:0016835;gbkey=CDS;gene=murQ;go_function=carbon-oxygen lyase activity|0016835||IEA;go_process=peptidoglycan turnover|0009254||IEA,amino sugar catabolic process|0046348||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246146.1;locus_tag=L2557_RS03455;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=WP_235409821.1;transl_table=11 NZ_JAIKUA010000036.1 RefSeq gene 11650 13014 . + . ID=gene-L2557_RS03460;Name=L2557_RS03460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03460 NZ_JAIKUA010000036.1 Protein Homology CDS 11650 13014 . + 0 ID=cds-WP_075672251.1;Parent=gene-L2557_RS03460;Dbxref=GenBank:WP_075672251.1;Name=WP_075672251.1;Ontology_term=GO:0009401,GO:0008982,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246145.1;locus_tag=L2557_RS03460;product=PTS transporter subunit EIIC;protein_id=WP_075672251.1;transl_table=11 NZ_JAIKUA010000036.1 RefSeq gene 13039 13890 . + . ID=gene-L2557_RS03465;Name=L2557_RS03465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03465 NZ_JAIKUA010000036.1 Protein Homology CDS 13039 13890 . + 0 ID=cds-WP_099660257.1;Parent=gene-L2557_RS03465;Dbxref=GenBank:WP_099660257.1;Name=WP_099660257.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246144.1;locus_tag=L2557_RS03465;product=MurR/RpiR family transcriptional regulator;protein_id=WP_099660257.1;transl_table=11 NZ_JAIKUA010000036.1 RefSeq gene 13890 14678 . + . ID=gene-L2557_RS03470;Name=L2557_RS03470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03470 NZ_JAIKUA010000036.1 Protein Homology CDS 13890 14678 . + 0 ID=cds-WP_099660256.1;Parent=gene-L2557_RS03470;Dbxref=GenBank:WP_099660256.1;Name=WP_099660256.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246143.1;locus_tag=L2557_RS03470;product=sulfite exporter TauE/SafE family protein;protein_id=WP_099660256.1;transl_table=11 NZ_JAIKUA010000036.1 RefSeq gene 14981 15082 . + . ID=gene-L2557_RS17915;Name=speFL;gbkey=Gene;gene=speFL;gene_biotype=protein_coding;locus_tag=L2557_RS17915 NZ_JAIKUA010000036.1 Protein Homology CDS 14981 15082 . + 0 ID=cds-WP_109372621.1;Parent=gene-L2557_RS17915;Dbxref=GenBank:WP_109372621.1;Name=WP_109372621.1;gbkey=CDS;gene=speFL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001312672.1;locus_tag=L2557_RS17915;product=leader peptide SpeFL;protein_id=WP_109372621.1;transl_table=11 NZ_JAIKUA010000036.1 RefSeq gene 15219 16211 . + . ID=gene-L2557_RS03475;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=L2557_RS03475 NZ_JAIKUA010000036.1 Protein Homology CDS 15219 16211 . + 0 ID=cds-WP_088493920.1;Parent=gene-L2557_RS03475;Dbxref=GenBank:WP_088493920.1;Name=WP_088493920.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012883135.1;locus_tag=L2557_RS03475;product=ornithine carbamoyltransferase;protein_id=WP_088493920.1;transl_table=11 NZ_JAIKUA010000036.1 RefSeq gene 16227 17174 . + . ID=gene-L2557_RS03480;Name=arcC;gbkey=Gene;gene=arcC;gene_biotype=protein_coding;locus_tag=L2557_RS03480 NZ_JAIKUA010000036.1 Protein Homology CDS 16227 17174 . + 0 ID=cds-WP_075672259.1;Parent=gene-L2557_RS03480;Dbxref=GenBank:WP_075672259.1;Name=WP_075672259.1;Ontology_term=GO:0006520,GO:0008804;gbkey=CDS;gene=arcC;go_function=carbamate kinase activity|0008804||IEA;go_process=amino acid metabolic process|0006520||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535582.1;locus_tag=L2557_RS03480;product=carbamate kinase;protein_id=WP_075672259.1;transl_table=11 NZ_JAIKUA010000036.1 RefSeq gene 17279 18790 . + . ID=gene-L2557_RS03485;Name=L2557_RS03485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03485 NZ_JAIKUA010000036.1 Protein Homology CDS 17279 18790 . + 0 ID=cds-WP_075672261.1;Parent=gene-L2557_RS03485;Dbxref=GenBank:WP_075672261.1;Name=WP_075672261.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535581.1;locus_tag=L2557_RS03485;product=YfcC family protein;protein_id=WP_075672261.1;transl_table=11 NZ_JAIKUA010000036.1 RefSeq gene 18981 19148 . - . ID=gene-L2557_RS18000;Name=L2557_RS18000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS18000 NZ_JAIKUA010000036.1 GeneMarkS-2+ CDS 18981 19148 . - 0 ID=cds-WP_432652518.1;Parent=gene-L2557_RS18000;Dbxref=GenBank:WP_432652518.1;Name=WP_432652518.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS18000;product=hypothetical protein;protein_id=WP_432652518.1;transl_table=11 NZ_JAIKUA010000036.1 RefSeq gene 19240 20937 . + . ID=gene-L2557_RS03495;Name=ilvB;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=L2557_RS03495 NZ_JAIKUA010000036.1 Protein Homology CDS 19240 20937 . + 0 ID=cds-WP_075672263.1;Parent=gene-L2557_RS03495;Dbxref=GenBank:WP_075672263.1;Name=WP_075672263.1;Ontology_term=GO:0009082,GO:0000287,GO:0003984,GO:0030976,GO:0050660;gbkey=CDS;gene=ilvB;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA,flavin adenine dinucleotide binding|0050660||IEA;go_process=branched-chain amino acid biosynthetic process|0009082||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246142.1;locus_tag=L2557_RS03495;product=acetolactate synthase large subunit;protein_id=WP_075672263.1;transl_table=11 NZ_JAIKUA010000036.1 RefSeq gene 20941 21225 . + . ID=gene-L2557_RS03500;Name=ilvN;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=L2557_RS03500 NZ_JAIKUA010000036.1 Protein Homology CDS 20941 21225 . + 0 ID=cds-WP_069368073.1;Parent=gene-L2557_RS03500;Dbxref=GenBank:WP_069368073.1;Name=WP_069368073.1;gbkey=CDS;gene=ilvN;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246140.1;locus_tag=L2557_RS03500;product=acetolactate synthase small subunit;protein_id=WP_069368073.1;transl_table=11 NZ_JAIKUA010000036.1 RefSeq gene 21297 22193 . - . ID=gene-L2557_RS03505;Name=L2557_RS03505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03505 NZ_JAIKUA010000036.1 Protein Homology CDS 21297 22193 . - 0 ID=cds-WP_075672265.1;Parent=gene-L2557_RS03505;Dbxref=GenBank:WP_075672265.1;Name=WP_075672265.1;Ontology_term=GO:0008324,GO:0046872;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249537.1;locus_tag=L2557_RS03505;product=cation diffusion facilitator family transporter;protein_id=WP_075672265.1;transl_table=11 NZ_JAIKUA010000036.1 RefSeq gene 22403 22981 . - . ID=gene-L2557_RS03510;Name=L2557_RS03510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03510 NZ_JAIKUA010000036.1 Protein Homology CDS 22403 22981 . - 0 ID=cds-WP_069368071.1;Parent=gene-L2557_RS03510;Dbxref=GenBank:WP_069368071.1;Name=WP_069368071.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246138.1;locus_tag=L2557_RS03510;product=helix-turn-helix domain-containing protein;protein_id=WP_069368071.1;transl_table=11 NZ_JAIKUA010000036.1 RefSeq gene 23166 23912 . + . ID=gene-L2557_RS03515;Name=L2557_RS03515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03515 NZ_JAIKUA010000036.1 Protein Homology CDS 23166 23912 . + 0 ID=cds-WP_109419207.1;Parent=gene-L2557_RS03515;Dbxref=GenBank:WP_109419207.1;Name=WP_109419207.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012004767.1;locus_tag=L2557_RS03515;product=sulfite exporter TauE/SafE family protein;protein_id=WP_109419207.1;transl_table=11 NZ_JAIKUA010000036.1 RefSeq gene 24113 25300 . + . ID=gene-L2557_RS03520;Name=L2557_RS03520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03520 NZ_JAIKUA010000036.1 Protein Homology CDS 24113 25300 . + 0 ID=cds-WP_235409823.1;Parent=gene-L2557_RS03520;Dbxref=GenBank:WP_235409823.1;Name=WP_235409823.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249536.1;locus_tag=L2557_RS03520;product=MFS transporter;protein_id=WP_235409823.1;transl_table=11 ##sequence-region NZ_JAIKUA010000360.1 1 837 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000360.1 RefSeq region 1 837 . + . ID=NZ_JAIKUA010000360.1:1..837;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000360.1 RefSeq pseudogene 1 516 . - . ID=gene-L2557_RS17190;Name=L2557_RS17190;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17190;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000360.1 GeneMarkS-2+ CDS 1 516 . - 0 ID=cds-L2557_RS17190;Parent=gene-L2557_RS17190;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17190;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000361.1 1 1025 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000361.1 RefSeq region 1 1025 . + . ID=NZ_JAIKUA010000361.1:1..1025;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000361.1 RefSeq gene 809 1025 . + . ID=gene-L2557_RS17195;Name=L2557_RS17195;end_range=1025,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17195;partial=true NZ_JAIKUA010000361.1 GeneMarkS-2+ CDS 809 1025 . + 0 ID=cds-WP_235410246.1;Parent=gene-L2557_RS17195;Dbxref=GenBank:WP_235410246.1;Name=WP_235410246.1;end_range=1025,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17195;partial=true;product=hypothetical protein;protein_id=WP_235410246.1;transl_table=11 ##sequence-region NZ_JAIKUA010000362.1 1 422 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000362.1 RefSeq region 1 422 . + . ID=NZ_JAIKUA010000362.1:1..422;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000363.1 1 5465 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000363.1 RefSeq region 1 5465 . + . ID=NZ_JAIKUA010000363.1:1..5465;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000363.1 RefSeq gene 1 2136 . + . ID=gene-L2557_RS17200;Name=L2557_RS17200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17200;partial=true;start_range=.,1 NZ_JAIKUA010000363.1 Protein Homology CDS 1 2136 . + 0 ID=cds-WP_235410247.1;Parent=gene-L2557_RS17200;Dbxref=GenBank:WP_235410247.1;Name=WP_235410247.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049695.2;locus_tag=L2557_RS17200;partial=true;product=T6SS effector phospholipase Tle3 domain-containing protein;protein_id=WP_235410247.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000363.1 RefSeq gene 2190 2927 . + . ID=gene-L2557_RS17205;Name=L2557_RS17205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17205 NZ_JAIKUA010000363.1 Protein Homology CDS 2190 2927 . + 0 ID=cds-WP_156733878.1;Parent=gene-L2557_RS17205;Dbxref=GenBank:WP_156733878.1;Name=WP_156733878.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049694.1;locus_tag=L2557_RS17205;product=T6SS immunity protein Tli3 family protein;protein_id=WP_156733878.1;transl_table=11 NZ_JAIKUA010000363.1 RefSeq gene 2939 5077 . + . ID=gene-L2557_RS17210;Name=L2557_RS17210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17210 NZ_JAIKUA010000363.1 Protein Homology CDS 2939 5077 . + 0 ID=cds-WP_099659273.1;Parent=gene-L2557_RS17210;Dbxref=GenBank:WP_099659273.1;Name=WP_099659273.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049695.2;locus_tag=L2557_RS17210;product=T6SS effector phospholipase Tle3 domain-containing protein;protein_id=WP_099659273.1;transl_table=11 NZ_JAIKUA010000363.1 RefSeq gene 5116 5370 . + . ID=gene-L2557_RS17215;Name=L2557_RS17215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17215 NZ_JAIKUA010000363.1 Protein Homology CDS 5116 5370 . + 0 ID=cds-WP_075674106.1;Parent=gene-L2557_RS17215;Dbxref=GenBank:WP_075674106.1;Name=WP_075674106.1;Ontology_term=GO:0008270;gbkey=CDS;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000443231.1;locus_tag=L2557_RS17215;product=PAAR domain-containing protein;protein_id=WP_075674106.1;transl_table=11 ##sequence-region NZ_JAIKUA010000364.1 1 264 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000364.1 RefSeq region 1 264 . + . ID=NZ_JAIKUA010000364.1:1..264;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000364.1 RefSeq gene 1 264 . + . ID=gene-L2557_RS17220;Name=L2557_RS17220;end_range=264,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17220;partial=true;start_range=.,1 NZ_JAIKUA010000364.1 GeneMarkS-2+ CDS 1 264 . + 0 ID=cds-WP_235410248.1;Parent=gene-L2557_RS17220;Dbxref=GenBank:WP_235410248.1;Name=WP_235410248.1;end_range=264,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17220;partial=true;product=hypothetical protein;protein_id=WP_235410248.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000365.1 1 729 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000365.1 RefSeq region 1 729 . + . ID=NZ_JAIKUA010000365.1:1..729;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000365.1 RefSeq gene 1 687 . - . ID=gene-L2557_RS17225;Name=L2557_RS17225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17225;partial=true;start_range=.,1 NZ_JAIKUA010000365.1 GeneMarkS-2+ CDS 1 687 . - 0 ID=cds-WP_235410249.1;Parent=gene-L2557_RS17225;Dbxref=GenBank:WP_235410249.1;Name=WP_235410249.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17225;partial=true;product=hypothetical protein;protein_id=WP_235410249.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000366.1 1 2412 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000366.1 RefSeq region 1 2412 . + . ID=NZ_JAIKUA010000366.1:1..2412;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000366.1 RefSeq gene 165 497 . + . ID=gene-L2557_RS17230;Name=L2557_RS17230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17230 NZ_JAIKUA010000366.1 Protein Homology CDS 165 497 . + 0 ID=cds-WP_075673155.1;Parent=gene-L2557_RS17230;Dbxref=GenBank:WP_075673155.1;Name=WP_075673155.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005227813.1;locus_tag=L2557_RS17230;product=DUF1971 domain-containing protein;protein_id=WP_075673155.1;transl_table=11 NZ_JAIKUA010000366.1 RefSeq gene 505 843 . + . ID=gene-L2557_RS17235;Name=L2557_RS17235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17235 NZ_JAIKUA010000366.1 Protein Homology CDS 505 843 . + 0 ID=cds-WP_075673154.1;Parent=gene-L2557_RS17235;Dbxref=GenBank:WP_075673154.1;Name=WP_075673154.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014229999.1;locus_tag=L2557_RS17235;product=DUF1869 domain-containing protein;protein_id=WP_075673154.1;transl_table=11 NZ_JAIKUA010000366.1 RefSeq gene 912 1784 . - . ID=gene-L2557_RS17240;Name=L2557_RS17240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17240 NZ_JAIKUA010000366.1 Protein Homology CDS 912 1784 . - 0 ID=cds-WP_075673153.1;Parent=gene-L2557_RS17240;Dbxref=GenBank:WP_075673153.1;Name=WP_075673153.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004936358.1;locus_tag=L2557_RS17240;product=LysR family transcriptional regulator;protein_id=WP_075673153.1;transl_table=11 NZ_JAIKUA010000366.1 RefSeq gene 1885 2337 . + . ID=gene-L2557_RS17245;Name=L2557_RS17245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17245 NZ_JAIKUA010000366.1 Protein Homology CDS 1885 2337 . + 0 ID=cds-WP_075673152.1;Parent=gene-L2557_RS17245;Dbxref=GenBank:WP_075673152.1;Name=WP_075673152.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004878201.1;locus_tag=L2557_RS17245;product=multidrug/biocide efflux PACE transporter;protein_id=WP_075673152.1;transl_table=11 ##sequence-region NZ_JAIKUA010000367.1 1 279 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000367.1 RefSeq region 1 279 . + . ID=NZ_JAIKUA010000367.1:1..279;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000367.1 RefSeq gene 1 279 . + . ID=gene-L2557_RS17250;Name=L2557_RS17250;end_range=279,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17250;partial=true;start_range=.,1 NZ_JAIKUA010000367.1 GeneMarkS-2+ CDS 1 279 . + 2 ID=cds-WP_235410250.1;Parent=gene-L2557_RS17250;Dbxref=GenBank:WP_235410250.1;Name=WP_235410250.1;end_range=279,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17250;partial=true;product=hypothetical protein;protein_id=WP_235410250.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000368.1 1 439 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000368.1 RefSeq region 1 439 . + . ID=NZ_JAIKUA010000368.1:1..439;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000368.1 RefSeq pseudogene 1 394 . + . ID=gene-L2557_RS17255;Name=L2557_RS17255;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17255;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000368.1 GeneMarkS-2+ CDS 1 394 . + 1 ID=cds-L2557_RS17255;Parent=gene-L2557_RS17255;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17255;partial=true;product=nucleotidyltransferase domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000369.1 1 785 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000369.1 RefSeq region 1 785 . + . ID=NZ_JAIKUA010000369.1:1..785;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000369.1 RefSeq gene 366 668 . + . ID=gene-L2557_RS17260;Name=L2557_RS17260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17260 NZ_JAIKUA010000369.1 Protein Homology CDS 366 668 . + 0 ID=cds-WP_075674359.1;Parent=gene-L2557_RS17260;Dbxref=GenBank:WP_075674359.1;Name=WP_075674359.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018534.6;locus_tag=L2557_RS17260;product=hypothetical protein;protein_id=WP_075674359.1;transl_table=11 ##sequence-region NZ_JAIKUA010000037.1 1 40122 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000037.1 RefSeq region 1 40122 . + . ID=NZ_JAIKUA010000037.1:1..40122;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000037.1 RefSeq gene 241 1503 . - . ID=gene-L2557_RS03525;Name=amiC;gbkey=Gene;gene=amiC;gene_biotype=protein_coding;locus_tag=L2557_RS03525 NZ_JAIKUA010000037.1 Protein Homology CDS 241 1503 . - 0 ID=cds-WP_075671742.1;Parent=gene-L2557_RS03525;Dbxref=GenBank:WP_075671742.1;Name=WP_075671742.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=amiC;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245505.1;locus_tag=L2557_RS03525;product=N-acetylmuramoyl-L-alanine amidase AmiC;protein_id=WP_075671742.1;transl_table=11 NZ_JAIKUA010000037.1 RefSeq gene 1744 3078 . + . ID=gene-L2557_RS03530;Name=argA;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=L2557_RS03530 NZ_JAIKUA010000037.1 Protein Homology CDS 1744 3078 . + 0 ID=cds-WP_099660195.1;Parent=gene-L2557_RS03530;Dbxref=GenBank:WP_099660195.1;Name=WP_099660195.1;Ontology_term=GO:0006526,GO:0004042;gbkey=CDS;gene=argA;go_function=L-glutamate N-acetyltransferase activity|0004042||IEA;go_process=L-arginine biosynthetic process|0006526||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249500.1;locus_tag=L2557_RS03530;product=amino-acid N-acetyltransferase;protein_id=WP_099660195.1;transl_table=11 NZ_JAIKUA010000037.1 RefSeq gene 3151 5061 . - . ID=gene-L2557_RS03535;Name=recD;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=L2557_RS03535 NZ_JAIKUA010000037.1 Protein Homology CDS 3151 5061 . - 0 ID=cds-WP_099660196.1;Parent=gene-L2557_RS03535;Dbxref=GenBank:WP_099660196.1;Name=WP_099660196.1;Ontology_term=GO:0006302,GO:0006310,GO:0004386,GO:0008854,GO:0009338;gbkey=CDS;gene=recD;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=helicase activity|0004386||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=double-strand break repair|0006302||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245508.1;locus_tag=L2557_RS03535;product=exodeoxyribonuclease V subunit alpha;protein_id=WP_099660196.1;transl_table=11 NZ_JAIKUA010000037.1 RefSeq gene 5064 8675 . - . ID=gene-L2557_RS03540;Name=recB;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=L2557_RS03540 NZ_JAIKUA010000037.1 Protein Homology CDS 5064 8675 . - 0 ID=cds-WP_235409824.1;Parent=gene-L2557_RS03540;Dbxref=GenBank:WP_235409824.1;Name=WP_235409824.1;Ontology_term=GO:0006281,GO:0003677,GO:0003678,GO:0005524,GO:0008854;gbkey=CDS;gene=recB;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,exodeoxyribonuclease V activity|0008854||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535941.1;locus_tag=L2557_RS03540;product=exodeoxyribonuclease V subunit beta;protein_id=WP_235409824.1;transl_table=11 NZ_JAIKUA010000037.1 RefSeq gene 8672 11560 . - . ID=gene-L2557_RS03545;Name=ptrA;gbkey=Gene;gene=ptrA;gene_biotype=protein_coding;locus_tag=L2557_RS03545 NZ_JAIKUA010000037.1 Protein Homology CDS 8672 11560 . - 0 ID=cds-WP_235409826.1;Parent=gene-L2557_RS03545;Dbxref=GenBank:WP_235409826.1;Name=WP_235409826.1;Ontology_term=GO:0006508,GO:0004222,GO:0046872;gbkey=CDS;gene=ptrA;go_function=metalloendopeptidase activity|0004222||IEA,metal ion binding|0046872||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827526.1;locus_tag=L2557_RS03545;product=pitrilysin;protein_id=WP_235409826.1;transl_table=11 NZ_JAIKUA010000037.1 RefSeq gene 11576 14959 . - . ID=gene-L2557_RS03550;Name=recC;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=L2557_RS03550 NZ_JAIKUA010000037.1 Protein Homology CDS 11576 14959 . - 0 ID=cds-WP_235409827.1;Parent=gene-L2557_RS03550;Dbxref=GenBank:WP_235409827.1;Name=WP_235409827.1;Ontology_term=GO:0008854,GO:0009338;gbkey=CDS;gene=recC;go_component=exodeoxyribonuclease V complex|0009338||IEA;go_function=exodeoxyribonuclease V activity|0008854||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245513.1;locus_tag=L2557_RS03550;product=exodeoxyribonuclease V subunit gamma;protein_id=WP_235409827.1;transl_table=11 NZ_JAIKUA010000037.1 RefSeq gene 14975 15316 . - . ID=gene-L2557_RS03555;Name=L2557_RS03555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03555 NZ_JAIKUA010000037.1 Protein Homology CDS 14975 15316 . - 0 ID=cds-WP_226891814.1;Parent=gene-L2557_RS03555;Dbxref=GenBank:WP_226891814.1;Name=WP_226891814.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250233.1;locus_tag=L2557_RS03555;product=hypothetical protein;protein_id=WP_226891814.1;transl_table=11 NZ_JAIKUA010000037.1 RefSeq gene 15304 15765 . - . ID=gene-L2557_RS03560;Name=L2557_RS03560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03560 NZ_JAIKUA010000037.1 Protein Homology CDS 15304 15765 . - 0 ID=cds-WP_099660199.1;Parent=gene-L2557_RS03560;Dbxref=GenBank:WP_099660199.1;Name=WP_099660199.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535950.1;locus_tag=L2557_RS03560;product=DUF2509 family protein;protein_id=WP_099660199.1;transl_table=11 NZ_JAIKUA010000037.1 RefSeq gene 15762 16406 . - . ID=gene-L2557_RS03565;Name=L2557_RS03565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03565 NZ_JAIKUA010000037.1 Protein Homology CDS 15762 16406 . - 0 ID=cds-WP_075671756.1;Parent=gene-L2557_RS03565;Dbxref=GenBank:WP_075671756.1;Name=WP_075671756.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250231.1;locus_tag=L2557_RS03565;product=prepilin peptidase-dependent protein;protein_id=WP_075671756.1;transl_table=11 NZ_JAIKUA010000037.1 RefSeq gene 16400 16909 . - . ID=gene-L2557_RS03570;Name=L2557_RS03570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03570 NZ_JAIKUA010000037.1 Protein Homology CDS 16400 16909 . - 0 ID=cds-WP_223672689.1;Parent=gene-L2557_RS03570;Dbxref=GenBank:WP_223672689.1;Name=WP_223672689.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827529.1;locus_tag=L2557_RS03570;product=potassium:proton antiporter;protein_id=WP_223672689.1;transl_table=11 NZ_JAIKUA010000037.1 RefSeq gene 17144 17995 . - . ID=gene-L2557_RS03575;Name=L2557_RS03575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03575 NZ_JAIKUA010000037.1 Protein Homology CDS 17144 17995 . - 0 ID=cds-WP_075671758.1;Parent=gene-L2557_RS03575;Dbxref=GenBank:WP_075671758.1;Name=WP_075671758.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004924967.1;locus_tag=L2557_RS03575;product=thymidylate synthase;protein_id=WP_075671758.1;transl_table=11 NZ_JAIKUA010000037.1 RefSeq gene 18041 18931 . - . ID=gene-L2557_RS03580;Name=lgt;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=L2557_RS03580 NZ_JAIKUA010000037.1 Protein Homology CDS 18041 18931 . - 0 ID=cds-WP_075671760.1;Parent=gene-L2557_RS03580;Dbxref=GenBank:WP_075671760.1;Name=WP_075671760.1;Ontology_term=GO:0009249,GO:0008961,GO:0016020;gbkey=CDS;gene=lgt;go_component=membrane|0016020||IEA;go_function=phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity|0008961||IEA;go_process=protein lipoylation|0009249||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535954.1;locus_tag=L2557_RS03580;product=prolipoprotein diacylglyceryl transferase;protein_id=WP_075671760.1;transl_table=11 NZ_JAIKUA010000037.1 RefSeq gene 19011 21257 . - . ID=gene-L2557_RS03585;Name=ptsP;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=L2557_RS03585 NZ_JAIKUA010000037.1 Protein Homology CDS 19011 21257 . - 0 ID=cds-WP_235409829.1;Parent=gene-L2557_RS03585;Dbxref=GenBank:WP_235409829.1;Name=WP_235409829.1;gbkey=CDS;gene=ptsP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245523.1;locus_tag=L2557_RS03585;product=phosphoenolpyruvate--protein phosphotransferase;protein_id=WP_235409829.1;transl_table=11 NZ_JAIKUA010000037.1 RefSeq gene 21266 21796 . - . ID=gene-L2557_RS03590;Name=rppH;gbkey=Gene;gene=rppH;gene_biotype=protein_coding;locus_tag=L2557_RS03590 NZ_JAIKUA010000037.1 Protein Homology CDS 21266 21796 . - 0 ID=cds-WP_036934096.1;Parent=gene-L2557_RS03590;Dbxref=GenBank:WP_036934096.1;Name=WP_036934096.1;Ontology_term=GO:0016787;gbkey=CDS;gene=rppH;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245524.1;locus_tag=L2557_RS03590;product=RNA pyrophosphohydrolase;protein_id=WP_036934096.1;transl_table=11 NZ_JAIKUA010000037.1 cmsearch riboswitch 21909 22006 . + . ID=id-NZ_JAIKUA010000037.1:21909..22006;Dbxref=RFAM:RF00059;Note=TPP riboswitch;bound_moiety=thiamine pyrophosphate;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAIKUA010000037.1 RefSeq gene 22122 23084 . + . ID=gene-L2557_RS03595;Name=thiB;gbkey=Gene;gene=thiB;gene_biotype=protein_coding;locus_tag=L2557_RS03595 NZ_JAIKUA010000037.1 Protein Homology CDS 22122 23084 . + 0 ID=cds-WP_075671792.1;Parent=gene-L2557_RS03595;Dbxref=GenBank:WP_075671792.1;Name=WP_075671792.1;Ontology_term=GO:0015888,GO:0030975,GO:0048502,GO:0030288,GO:0055052;gbkey=CDS;gene=thiB;go_component=outer membrane-bounded periplasmic space|0030288||IEA,ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=thiamine binding|0030975||IEA,ABC-type thiamine transporter activity|0048502||IEA;go_process=thiamine transport|0015888||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011144995.1;locus_tag=L2557_RS03595;product=thiamine ABC transporter substrate binding subunit;protein_id=WP_075671792.1;transl_table=11 NZ_JAIKUA010000037.1 RefSeq gene 23084 24664 . + . ID=gene-L2557_RS03600;Name=thiP;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;locus_tag=L2557_RS03600 NZ_JAIKUA010000037.1 Protein Homology CDS 23084 24664 . + 0 ID=cds-WP_099660201.1;Parent=gene-L2557_RS03600;Dbxref=GenBank:WP_099660201.1;Name=WP_099660201.1;Ontology_term=GO:0015888,GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=thiP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=thiamine transport|0015888||IEA,transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185457.1;locus_tag=L2557_RS03600;product=thiamine/thiamine pyrophosphate ABC transporter permease ThiP;protein_id=WP_099660201.1;transl_table=11 NZ_JAIKUA010000037.1 RefSeq gene 24657 25358 . + . ID=gene-L2557_RS03605;Name=thiQ;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=L2557_RS03605 NZ_JAIKUA010000037.1 Protein Homology CDS 24657 25358 . + 0 ID=cds-WP_075671766.1;Parent=gene-L2557_RS03605;Dbxref=GenBank:WP_075671766.1;Name=WP_075671766.1;gbkey=CDS;gene=thiQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245527.1;locus_tag=L2557_RS03605;product=thiamine ABC transporter ATP-binding protein ThiQ;protein_id=WP_075671766.1;transl_table=11 NZ_JAIKUA010000037.1 RefSeq gene 25447 27801 . + . ID=gene-L2557_RS03610;Name=L2557_RS03610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03610 NZ_JAIKUA010000037.1 Protein Homology CDS 25447 27801 . + 0 ID=cds-WP_235409830.1;Parent=gene-L2557_RS03610;Dbxref=GenBank:WP_235409830.1;Name=WP_235409830.1;Ontology_term=GO:0000166,GO:0003676,GO:0003887;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleic acid binding|0003676||IEA,DNA-directed DNA polymerase activity|0003887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250226.1;locus_tag=L2557_RS03610;product=DNA polymerase II;protein_id=WP_235409830.1;transl_table=11 NZ_JAIKUA010000037.1 RefSeq gene 27987 30890 . + . ID=gene-L2557_RS03615;Name=rapA;gbkey=Gene;gene=rapA;gene_biotype=protein_coding;locus_tag=L2557_RS03615 NZ_JAIKUA010000037.1 Protein Homology CDS 27987 30890 . + 0 ID=cds-WP_075671770.1;Parent=gene-L2557_RS03615;Dbxref=GenBank:WP_075671770.1;Name=WP_075671770.1;Ontology_term=GO:0006355,GO:0005524,GO:0016817,GO:0140658;gbkey=CDS;gene=rapA;go_function=ATP binding|0005524||IEA,hydrolase activity%2C acting on acid anhydrides|0016817||IEA,ATP-dependent chromatin remodeler activity|0140658||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005181.1;locus_tag=L2557_RS03615;product=RNA polymerase-associated protein RapA;protein_id=WP_075671770.1;transl_table=11 NZ_JAIKUA010000037.1 RefSeq gene 30946 31599 . + . ID=gene-L2557_RS03620;Name=rluA;gbkey=Gene;gene=rluA;gene_biotype=protein_coding;locus_tag=L2557_RS03620 NZ_JAIKUA010000037.1 Protein Homology CDS 30946 31599 . + 0 ID=cds-WP_072064290.1;Parent=gene-L2557_RS03620;Dbxref=GenBank:WP_072064290.1;Name=WP_072064290.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluA;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535967.1;locus_tag=L2557_RS03620;product=bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA;protein_id=WP_072064290.1;transl_table=11 NZ_JAIKUA010000037.1 RefSeq gene 31843 32643 . - . ID=gene-L2557_RS03625;Name=djlA;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=L2557_RS03625 NZ_JAIKUA010000037.1 Protein Homology CDS 31843 32643 . - 0 ID=cds-WP_075671772.1;Parent=gene-L2557_RS03625;Dbxref=GenBank:WP_075671772.1;Name=WP_075671772.1;Ontology_term=GO:0051087;gbkey=CDS;gene=djlA;go_function=protein-folding chaperone binding|0051087||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250224.1;locus_tag=L2557_RS03625;product=co-chaperone DjlA;protein_id=WP_075671772.1;transl_table=11 NZ_JAIKUA010000037.1 RefSeq gene 33074 35440 . + . ID=gene-L2557_RS03630;Name=lptD;gbkey=Gene;gene=lptD;gene_biotype=protein_coding;locus_tag=L2557_RS03630 NZ_JAIKUA010000037.1 Protein Homology CDS 33074 35440 . + 0 ID=cds-WP_075671774.1;Parent=gene-L2557_RS03630;Dbxref=GenBank:WP_075671774.1;Name=WP_075671774.1;Ontology_term=GO:0015920,GO:0043165,GO:0019867;gbkey=CDS;gene=lptD;go_component=outer membrane|0019867||IEA;go_process=lipopolysaccharide transport|0015920||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368321.1;locus_tag=L2557_RS03630;product=LPS assembly protein LptD;protein_id=WP_075671774.1;transl_table=11 NZ_JAIKUA010000037.1 RefSeq gene 35491 36828 . + . ID=gene-L2557_RS03635;Name=surA;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=L2557_RS03635 NZ_JAIKUA010000037.1 Protein Homology CDS 35491 36828 . + 0 ID=cds-WP_075671776.1;Parent=gene-L2557_RS03635;Dbxref=GenBank:WP_075671776.1;Name=WP_075671776.1;Ontology_term=GO:0006457,GO:0043165,GO:0050821,GO:0003755,GO:0042277,GO:0051082,GO:0030288;gbkey=CDS;gene=surA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA,peptide binding|0042277||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,Gram-negative-bacterium-type cell outer membrane assembly|0043165||IEA,protein stabilization|0050821||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827534.1;locus_tag=L2557_RS03635;product=peptidylprolyl isomerase SurA;protein_id=WP_075671776.1;transl_table=11 NZ_JAIKUA010000037.1 RefSeq gene 36818 37816 . + . ID=gene-L2557_RS03640;Name=pdxA;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=L2557_RS03640 NZ_JAIKUA010000037.1 Protein Homology CDS 36818 37816 . + 0 ID=cds-WP_109419676.1;Parent=gene-L2557_RS03640;Dbxref=GenBank:WP_109419676.1;Name=WP_109419676.1;Ontology_term=GO:0008615,GO:0050570;gbkey=CDS;gene=pdxA;go_function=4-hydroxythreonine-4-phosphate dehydrogenase activity|0050570||IEA;go_process=pyridoxine biosynthetic process|0008615||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245539.1;locus_tag=L2557_RS03640;product=4-hydroxythreonine-4-phosphate dehydrogenase PdxA;protein_id=WP_109419676.1;transl_table=11 NZ_JAIKUA010000037.1 RefSeq gene 37809 38627 . + . ID=gene-L2557_RS03645;Name=rsmA;gbkey=Gene;gene=rsmA;gene_biotype=protein_coding;locus_tag=L2557_RS03645 NZ_JAIKUA010000037.1 Protein Homology CDS 37809 38627 . + 0 ID=cds-WP_156734007.1;Parent=gene-L2557_RS03645;Dbxref=GenBank:WP_156734007.1;Name=WP_156734007.1;Ontology_term=GO:0000154,GO:0006364,GO:0000179;gbkey=CDS;gene=rsmA;go_function=rRNA (adenine-N6%2CN6-)-dimethyltransferase activity|0000179||IEA;go_process=rRNA modification|0000154||IEA,rRNA processing|0006364||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011144986.1;locus_tag=L2557_RS03645;product=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA;protein_id=WP_156734007.1;transl_table=11 NZ_JAIKUA010000037.1 RefSeq gene 38653 39030 . + . ID=gene-L2557_RS03650;Name=apaG;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=L2557_RS03650 NZ_JAIKUA010000037.1 Protein Homology CDS 38653 39030 . + 0 ID=cds-WP_099660203.1;Parent=gene-L2557_RS03650;Dbxref=GenBank:WP_099660203.1;Name=WP_099660203.1;gbkey=CDS;gene=apaG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000610901.1;locus_tag=L2557_RS03650;product=Co2+/Mg2+ efflux protein ApaG;protein_id=WP_099660203.1;transl_table=11 NZ_JAIKUA010000037.1 RefSeq gene 39033 39854 . + . ID=gene-L2557_RS03655;Name=apaH;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=L2557_RS03655 NZ_JAIKUA010000037.1 Protein Homology CDS 39033 39854 . + 0 ID=cds-WP_099660204.1;Parent=gene-L2557_RS03655;Dbxref=GenBank:WP_099660204.1;Name=WP_099660204.1;Ontology_term=GO:0008803;gbkey=CDS;gene=apaH;go_function=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity|0008803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535979.1;locus_tag=L2557_RS03655;product=bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH;protein_id=WP_099660204.1;transl_table=11 ##sequence-region NZ_JAIKUA010000370.1 1 1225 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000370.1 RefSeq region 1 1225 . + . ID=NZ_JAIKUA010000370.1:1..1225;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000370.1 RefSeq gene 1 291 . + . ID=gene-L2557_RS17265;Name=L2557_RS17265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17265;partial=true;start_range=.,1 NZ_JAIKUA010000370.1 GeneMarkS-2+ CDS 1 291 . + 0 ID=cds-WP_235410251.1;Parent=gene-L2557_RS17265;Dbxref=GenBank:WP_235410251.1;Name=WP_235410251.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17265;partial=true;product=hypothetical protein;protein_id=WP_235410251.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000370.1 RefSeq gene 341 1225 . + . ID=gene-L2557_RS17270;Name=L2557_RS17270;end_range=1225,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17270;partial=true NZ_JAIKUA010000370.1 Protein Homology CDS 341 1225 . + 0 ID=cds-WP_235410252.1;Parent=gene-L2557_RS17270;Dbxref=GenBank:WP_235410252.1;Name=WP_235410252.1;end_range=1225,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015501.6;locus_tag=L2557_RS17270;partial=true;product=Tc toxin subunit A;protein_id=WP_235410252.1;transl_table=11 ##sequence-region NZ_JAIKUA010000371.1 1 203 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000371.1 RefSeq region 1 203 . + . ID=NZ_JAIKUA010000371.1:1..203;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000371.1 RefSeq gene 65 140 . + . ID=gene-L2557_RS17275;Name=L2557_RS17275;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS17275 NZ_JAIKUA010000371.1 tRNAscan-SE tRNA 65 140 . + . ID=rna-L2557_RS17275;Parent=gene-L2557_RS17275;anticodon=(pos:98..100);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS17275;product=tRNA-Gly NZ_JAIKUA010000371.1 tRNAscan-SE exon 65 140 . + . ID=exon-L2557_RS17275-1;Parent=rna-L2557_RS17275;anticodon=(pos:98..100);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS17275;product=tRNA-Gly ##sequence-region NZ_JAIKUA010000372.1 1 5428 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000372.1 RefSeq region 1 5428 . + . ID=NZ_JAIKUA010000372.1:1..5428;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000372.1 RefSeq pseudogene 294 474 . + . ID=gene-L2557_RS17280;Name=L2557_RS17280;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17280;pseudo=true NZ_JAIKUA010000372.1 Protein Homology CDS 294 474 . + 0 ID=cds-L2557_RS17280;Parent=gene-L2557_RS17280;Note=frameshifted;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012769948.1;locus_tag=L2557_RS17280;product=DNA polymerase III subunit theta;pseudo=true;transl_table=11 NZ_JAIKUA010000372.1 RefSeq gene 477 740 . - . ID=gene-L2557_RS17285;Name=L2557_RS17285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17285 NZ_JAIKUA010000372.1 Protein Homology CDS 477 740 . - 0 ID=cds-WP_075670550.1;Parent=gene-L2557_RS17285;Dbxref=GenBank:WP_075670550.1;Name=WP_075670550.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017891408.1;locus_tag=L2557_RS17285;product=immunity protein;protein_id=WP_075670550.1;transl_table=11 NZ_JAIKUA010000372.1 RefSeq gene 740 2623 . - . ID=gene-L2557_RS17290;Name=L2557_RS17290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17290 NZ_JAIKUA010000372.1 Protein Homology CDS 740 2623 . - 0 ID=cds-WP_099659387.1;Parent=gene-L2557_RS17290;Dbxref=GenBank:WP_099659387.1;Name=WP_099659387.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF015479.6;locus_tag=L2557_RS17290;product=colicin-like bacteriocin tRNase domain-containing protein;protein_id=WP_099659387.1;transl_table=11 NZ_JAIKUA010000372.1 RefSeq gene 2642 2890 . - . ID=gene-L2557_RS17990;Name=L2557_RS17990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17990 NZ_JAIKUA010000372.1 Protein Homology CDS 2642 2890 . - 0 ID=cds-WP_369468309.1;Parent=gene-L2557_RS17990;Dbxref=GenBank:WP_369468309.1;Name=WP_369468309.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF022022.6;locus_tag=L2557_RS17990;product=phage antirepressor N-terminal domain-containing protein;protein_id=WP_369468309.1;transl_table=11 NZ_JAIKUA010000372.1 RefSeq gene 3244 3315 . - . ID=gene-L2557_RS17295;Name=L2557_RS17295;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS17295 NZ_JAIKUA010000372.1 tRNAscan-SE tRNA 3244 3315 . - . ID=rna-L2557_RS17295;Parent=gene-L2557_RS17295;anticodon=(pos:complement(3280..3282));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS17295;product=tRNA-Arg NZ_JAIKUA010000372.1 tRNAscan-SE exon 3244 3315 . - . ID=exon-L2557_RS17295-1;Parent=rna-L2557_RS17295;anticodon=(pos:complement(3280..3282));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS17295;product=tRNA-Arg NZ_JAIKUA010000372.1 RefSeq gene 3511 4287 . - . ID=gene-L2557_RS17300;Name=L2557_RS17300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17300 NZ_JAIKUA010000372.1 Protein Homology CDS 3511 4287 . - 0 ID=cds-WP_075670546.1;Parent=gene-L2557_RS17300;Dbxref=GenBank:WP_075670546.1;Name=WP_075670546.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658280.1;locus_tag=L2557_RS17300;product=AraC family transcriptional regulator;protein_id=WP_075670546.1;transl_table=11 NZ_JAIKUA010000372.1 RefSeq gene 4392 5195 . + . ID=gene-L2557_RS17305;Name=L2557_RS17305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17305 NZ_JAIKUA010000372.1 Protein Homology CDS 4392 5195 . + 0 ID=cds-WP_075670544.1;Parent=gene-L2557_RS17305;Dbxref=GenBank:WP_075670544.1;Name=WP_075670544.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020079533.1;locus_tag=L2557_RS17305;product=sulfite exporter TauE/SafE family protein;protein_id=WP_075670544.1;transl_table=11 ##sequence-region NZ_JAIKUA010000373.1 1 267 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000373.1 RefSeq region 1 267 . + . ID=NZ_JAIKUA010000373.1:1..267;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000374.1 1 291 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000374.1 RefSeq region 1 291 . + . ID=NZ_JAIKUA010000374.1:1..291;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000374.1 RefSeq gene 1 291 . + . ID=gene-L2557_RS17310;Name=L2557_RS17310;end_range=291,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17310;partial=true;start_range=.,1 NZ_JAIKUA010000374.1 GeneMarkS-2+ CDS 1 291 . + 1 ID=cds-WP_235410253.1;Parent=gene-L2557_RS17310;Dbxref=GenBank:WP_235410253.1;Name=WP_235410253.1;end_range=291,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17310;partial=true;product=hypothetical protein;protein_id=WP_235410253.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000375.1 1 559 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000375.1 RefSeq region 1 559 . + . ID=NZ_JAIKUA010000375.1:1..559;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000375.1 RefSeq gene 1 559 . + . ID=gene-L2557_RS17315;Name=L2557_RS17315;end_range=559,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17315;partial=true;start_range=.,1 NZ_JAIKUA010000375.1 Protein Homology CDS 1 559 . + 1 ID=cds-WP_459559366.1;Parent=gene-L2557_RS17315;Dbxref=GenBank:WP_459559366.1;Name=WP_459559366.1;end_range=559,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049694.1;locus_tag=L2557_RS17315;partial=true;product=T6SS immunity protein Tli3 family protein;protein_id=WP_459559366.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000376.1 1 1094 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000376.1 RefSeq region 1 1094 . + . ID=NZ_JAIKUA010000376.1:1..1094;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000376.1 RefSeq pseudogene 1 1094 . + . ID=gene-L2557_RS17320;Name=L2557_RS17320;end_range=1094,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17320;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000376.1 Protein Homology CDS 1 1094 . + 0 ID=cds-L2557_RS17320;Parent=gene-L2557_RS17320;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=1094,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252635.1;locus_tag=L2557_RS17320;partial=true;product=calcium-binding protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000377.1 1 9649 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000377.1 RefSeq region 1 9649 . + . ID=NZ_JAIKUA010000377.1:1..9649;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000377.1 RefSeq gene 17 1735 . - . ID=gene-L2557_RS17325;Name=L2557_RS17325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17325 NZ_JAIKUA010000377.1 Protein Homology CDS 17 1735 . - 0 ID=cds-WP_235410254.1;Parent=gene-L2557_RS17325;Dbxref=GenBank:WP_235410254.1;Name=WP_235410254.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017658.6;locus_tag=L2557_RS17325;product=filamentous hemagglutinin N-terminal domain-containing protein;protein_id=WP_235410254.1;transl_table=11 NZ_JAIKUA010000377.1 RefSeq pseudogene 1751 3291 . - . ID=gene-L2557_RS17330;Name=L2557_RS17330;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17330;pseudo=true NZ_JAIKUA010000377.1 Protein Homology CDS 1751 3291 . - 0 ID=cds-L2557_RS17330;Parent=gene-L2557_RS17330;Note=frameshifted;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: protein motif:HMM:NF015803.6;locus_tag=L2557_RS17330;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;pseudo=true;transl_table=11 NZ_JAIKUA010000377.1 RefSeq gene 3485 4951 . + . ID=gene-L2557_RS17335;Name=modF;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=L2557_RS17335 NZ_JAIKUA010000377.1 Protein Homology CDS 3485 4951 . + 0 ID=cds-WP_099659817.1;Parent=gene-L2557_RS17335;Dbxref=GenBank:WP_099659817.1;Name=WP_099659817.1;Ontology_term=GO:0005524;gbkey=CDS;gene=modF;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244444.1;locus_tag=L2557_RS17335;product=molybdate ABC transporter ATP-binding protein ModF;protein_id=WP_099659817.1;transl_table=11 NZ_JAIKUA010000377.1 RefSeq gene 5341 6093 . + . ID=gene-L2557_RS17340;Name=gpmA;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=L2557_RS17340 NZ_JAIKUA010000377.1 Protein Homology CDS 5341 6093 . + 0 ID=cds-WP_036938379.1;Parent=gene-L2557_RS17340;Dbxref=GenBank:WP_036938379.1;Name=WP_036938379.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmA;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000301556.1;locus_tag=L2557_RS17340;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase;protein_id=WP_036938379.1;transl_table=11 NZ_JAIKUA010000377.1 RefSeq gene 6168 7226 . - . ID=gene-L2557_RS17345;Name=aroG;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=L2557_RS17345 NZ_JAIKUA010000377.1 Protein Homology CDS 6168 7226 . - 0 ID=cds-WP_075672732.1;Parent=gene-L2557_RS17345;Dbxref=GenBank:WP_075672732.1;Name=WP_075672732.1;gbkey=CDS;gene=aroG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244442.1;locus_tag=L2557_RS17345;product=3-deoxy-7-phosphoheptulonate synthase AroG;protein_id=WP_075672732.1;transl_table=11 NZ_JAIKUA010000377.1 RefSeq gene 7470 8198 . - . ID=gene-L2557_RS17350;Name=pnuC;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=L2557_RS17350 NZ_JAIKUA010000377.1 Protein Homology CDS 7470 8198 . - 0 ID=cds-WP_083629089.1;Parent=gene-L2557_RS17350;Dbxref=GenBank:WP_083629089.1;Name=WP_083629089.1;Ontology_term=GO:0015890,GO:0015663,GO:0016020;gbkey=CDS;gene=pnuC;go_component=membrane|0016020||IEA;go_function=nicotinamide mononucleotide transmembrane transporter activity|0015663||IEA;go_process=nicotinamide mononucleotide transport|0015890||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247553.1;locus_tag=L2557_RS17350;product=nicotinamide riboside transporter PnuC;protein_id=WP_083629089.1;transl_table=11 NZ_JAIKUA010000377.1 RefSeq gene 8451 9338 . + . ID=gene-L2557_RS17355;Name=L2557_RS17355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17355 NZ_JAIKUA010000377.1 Protein Homology CDS 8451 9338 . + 0 ID=cds-WP_075672731.1;Parent=gene-L2557_RS17355;Dbxref=GenBank:WP_075672731.1;Name=WP_075672731.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537637.1;locus_tag=L2557_RS17355;product=aminoglycoside 6-adenylyltransferase;protein_id=WP_075672731.1;transl_table=11 NZ_JAIKUA010000377.1 RefSeq gene 9516 9591 . - . ID=gene-L2557_RS17360;Name=L2557_RS17360;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS17360 NZ_JAIKUA010000377.1 tRNAscan-SE tRNA 9516 9591 . - . ID=rna-L2557_RS17360;Parent=gene-L2557_RS17360;anticodon=(pos:complement(9556..9558));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS17360;product=tRNA-Lys NZ_JAIKUA010000377.1 tRNAscan-SE exon 9516 9591 . - . ID=exon-L2557_RS17360-1;Parent=rna-L2557_RS17360;anticodon=(pos:complement(9556..9558));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS17360;product=tRNA-Lys ##sequence-region NZ_JAIKUA010000378.1 1 1400 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000378.1 RefSeq region 1 1400 . + . ID=NZ_JAIKUA010000378.1:1..1400;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000378.1 RefSeq gene 1 587 . + . ID=gene-L2557_RS17365;Name=L2557_RS17365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17365;partial=true;start_range=.,1 NZ_JAIKUA010000378.1 GeneMarkS-2+ CDS 1 587 . + 2 ID=cds-WP_235410255.1;Parent=gene-L2557_RS17365;Dbxref=GenBank:WP_235410255.1;Name=WP_235410255.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17365;partial=true;product=hypothetical protein;protein_id=WP_235410255.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000378.1 RefSeq gene 771 1127 . - . ID=gene-L2557_RS17370;Name=L2557_RS17370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17370 NZ_JAIKUA010000378.1 Protein Homology CDS 771 1127 . - 0 ID=cds-WP_075673594.1;Parent=gene-L2557_RS17370;Dbxref=GenBank:WP_075673594.1;Name=WP_075673594.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242530.1;locus_tag=L2557_RS17370;product=MmcQ/YjbR family DNA-binding protein;protein_id=WP_075673594.1;transl_table=11 ##sequence-region NZ_JAIKUA010000379.1 1 397 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000379.1 RefSeq region 1 397 . + . ID=NZ_JAIKUA010000379.1:1..397;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000379.1 RefSeq gene 57 323 . - . ID=gene-L2557_RS17375;Name=L2557_RS17375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17375 NZ_JAIKUA010000379.1 Protein Homology CDS 57 323 . - 0 ID=cds-WP_075672811.1;Parent=gene-L2557_RS17375;Dbxref=GenBank:WP_075672811.1;Name=WP_075672811.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246255.1;locus_tag=L2557_RS17375;product=helix-turn-helix domain-containing protein;protein_id=WP_075672811.1;transl_table=11 ##sequence-region NZ_JAIKUA010000038.1 1 9513 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000038.1 RefSeq region 1 9513 . + . ID=NZ_JAIKUA010000038.1:1..9513;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000038.1 RefSeq gene 1 248 . + . ID=gene-L2557_RS03660;Name=L2557_RS03660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03660;partial=true;start_range=.,1 NZ_JAIKUA010000038.1 Protein Homology CDS 1 248 . + 2 ID=cds-WP_235409832.1;Parent=gene-L2557_RS03660;Dbxref=GenBank:WP_235409832.1;Name=WP_235409832.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536117.1;locus_tag=L2557_RS03660;partial=true;product=BON domain-containing protein;protein_id=WP_235409832.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000038.1 RefSeq gene 378 1442 . + . ID=gene-L2557_RS03665;Name=L2557_RS03665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03665 NZ_JAIKUA010000038.1 Protein Homology CDS 378 1442 . + 0 ID=cds-WP_075672700.1;Parent=gene-L2557_RS03665;Dbxref=GenBank:WP_075672700.1;Name=WP_075672700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008460089.1;locus_tag=L2557_RS03665;product=patatin-like phospholipase family protein;protein_id=WP_075672700.1;transl_table=11 NZ_JAIKUA010000038.1 RefSeq gene 1435 2217 . + . ID=gene-L2557_RS03670;Name=L2557_RS03670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03670 NZ_JAIKUA010000038.1 Protein Homology CDS 1435 2217 . + 0 ID=cds-WP_099660235.1;Parent=gene-L2557_RS03670;Dbxref=GenBank:WP_099660235.1;Name=WP_099660235.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245642.1;locus_tag=L2557_RS03670;product=TatD family hydrolase;protein_id=WP_099660235.1;transl_table=11 NZ_JAIKUA010000038.1 RefSeq gene 2469 3770 . + . ID=gene-L2557_RS03675;Name=L2557_RS03675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03675 NZ_JAIKUA010000038.1 Protein Homology CDS 2469 3770 . + 0 ID=cds-WP_075672698.1;Parent=gene-L2557_RS03675;Dbxref=GenBank:WP_075672698.1;Name=WP_075672698.1;Ontology_term=GO:1901642,GO:0005337,GO:0015293,GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;go_function=nucleoside transmembrane transporter activity|0005337||IEA,symporter activity|0015293||IEA;go_process=nucleoside transmembrane transport|1901642||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250187.1;locus_tag=L2557_RS03675;product=NupC/NupG family nucleoside CNT transporter;protein_id=WP_075672698.1;transl_table=11 NZ_JAIKUA010000038.1 RefSeq gene 4291 5070 . + . ID=gene-L2557_RS03680;Name=deoC;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=L2557_RS03680 NZ_JAIKUA010000038.1 Protein Homology CDS 4291 5070 . + 0 ID=cds-WP_064721106.1;Parent=gene-L2557_RS03680;Dbxref=GenBank:WP_064721106.1;Name=WP_064721106.1;Ontology_term=GO:0009264,GO:0004139,GO:0005737;gbkey=CDS;gene=deoC;go_component=cytoplasm|0005737||IEA;go_function=deoxyribose-phosphate aldolase activity|0004139||IEA;go_process=deoxyribonucleotide catabolic process|0009264||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536109.1;locus_tag=L2557_RS03680;product=deoxyribose-phosphate aldolase;protein_id=WP_064721106.1;transl_table=11 NZ_JAIKUA010000038.1 RefSeq gene 5141 6463 . + . ID=gene-L2557_RS03685;Name=deoA;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=L2557_RS03685 NZ_JAIKUA010000038.1 Protein Homology CDS 5141 6463 . + 0 ID=cds-WP_075672697.1;Parent=gene-L2557_RS03685;Dbxref=GenBank:WP_075672697.1;Name=WP_075672697.1;Ontology_term=GO:0006213,GO:0009032;gbkey=CDS;gene=deoA;go_function=thymidine phosphorylase activity|0009032||IEA;go_process=pyrimidine nucleoside metabolic process|0006213||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245639.1;locus_tag=L2557_RS03685;product=thymidine phosphorylase;protein_id=WP_075672697.1;transl_table=11 NZ_JAIKUA010000038.1 RefSeq gene 6530 7756 . + . ID=gene-L2557_RS03690;Name=deoB;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=L2557_RS03690 NZ_JAIKUA010000038.1 Protein Homology CDS 6530 7756 . + 0 ID=cds-WP_075672696.1;Parent=gene-L2557_RS03690;Dbxref=GenBank:WP_075672696.1;Name=WP_075672696.1;Ontology_term=GO:0009117,GO:0043094,GO:0000287,GO:0008973,GO:0005737;gbkey=CDS;gene=deoB;go_component=cytoplasm|0005737||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopentomutase activity|0008973||IEA;go_process=nucleotide metabolic process|0009117||IEA,metabolic compound salvage|0043094||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249422.1;locus_tag=L2557_RS03690;product=phosphopentomutase;protein_id=WP_075672696.1;transl_table=11 NZ_JAIKUA010000038.1 RefSeq gene 7834 8550 . + . ID=gene-L2557_RS03695;Name=deoD;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=L2557_RS03695 NZ_JAIKUA010000038.1 Protein Homology CDS 7834 8550 . + 0 ID=cds-WP_036934279.1;Parent=gene-L2557_RS03695;Dbxref=GenBank:WP_036934279.1;Name=WP_036934279.1;Ontology_term=GO:0006139,GO:0004731;gbkey=CDS;gene=deoD;go_function=purine-nucleoside phosphorylase activity|0004731||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249423.1;locus_tag=L2557_RS03695;product=purine-nucleoside phosphorylase;protein_id=WP_036934279.1;transl_table=11 NZ_JAIKUA010000038.1 RefSeq gene 8634 9083 . - . ID=gene-L2557_RS03700;Name=L2557_RS03700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03700 NZ_JAIKUA010000038.1 Protein Homology CDS 8634 9083 . - 0 ID=cds-WP_099660233.1;Parent=gene-L2557_RS03700;Dbxref=GenBank:WP_099660233.1;Name=WP_099660233.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536105.1;locus_tag=L2557_RS03700;product=hypothetical protein;protein_id=WP_099660233.1;transl_table=11 ##sequence-region NZ_JAIKUA010000380.1 1 794 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000380.1 RefSeq region 1 794 . + . ID=NZ_JAIKUA010000380.1:1..794;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000380.1 RefSeq gene 153 713 . - . ID=gene-L2557_RS17380;Name=L2557_RS17380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17380 NZ_JAIKUA010000380.1 Protein Homology CDS 153 713 . - 0 ID=cds-WP_075673048.1;Parent=gene-L2557_RS17380;Dbxref=GenBank:WP_075673048.1;Name=WP_075673048.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536338.1;locus_tag=L2557_RS17380;product=fimbrial protein;protein_id=WP_075673048.1;transl_table=11 ##sequence-region NZ_JAIKUA010000381.1 1 1151 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000381.1 RefSeq region 1 1151 . + . ID=NZ_JAIKUA010000381.1:1..1151;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000381.1 RefSeq gene 1 206 . - . ID=gene-L2557_RS17385;Name=L2557_RS17385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17385;partial=true;start_range=.,1 NZ_JAIKUA010000381.1 GeneMarkS-2+ CDS 1 206 . - 0 ID=cds-WP_235410256.1;Parent=gene-L2557_RS17385;Dbxref=GenBank:WP_235410256.1;Name=WP_235410256.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17385;partial=true;product=hypothetical protein;protein_id=WP_235410256.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000381.1 RefSeq gene 237 941 . - . ID=gene-L2557_RS17390;Name=L2557_RS17390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17390 NZ_JAIKUA010000381.1 GeneMarkS-2+ CDS 237 941 . - 0 ID=cds-WP_235410257.1;Parent=gene-L2557_RS17390;Dbxref=GenBank:WP_235410257.1;Name=WP_235410257.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17390;product=hypothetical protein;protein_id=WP_235410257.1;transl_table=11 ##sequence-region NZ_JAIKUA010000382.1 1 2200 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000382.1 RefSeq region 1 2200 . + . ID=NZ_JAIKUA010000382.1:1..2200;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000382.1 RefSeq gene 118 222 . + . ID=gene-L2557_RS17995;Name=tnaC;gbkey=Gene;gene=tnaC;gene_biotype=protein_coding;locus_tag=L2557_RS17995 NZ_JAIKUA010000382.1 Protein Homology CDS 118 222 . + 0 ID=cds-WP_075670806.1;Parent=gene-L2557_RS17995;Dbxref=GenBank:WP_075670806.1;Name=WP_075670806.1;Ontology_term=GO:0006569,GO:0031554,GO:0031556;gbkey=CDS;gene=tnaC;go_process=L-tryptophan catabolic process|0006569||IEA,regulation of termination of DNA-templated transcription|0031554||IEA,transcriptional attenuation by ribosome|0031556||IEA;inference=COORDINATES: protein motif:HMM:TIGR02616.1;locus_tag=L2557_RS17995;product=tryptophanase leader peptide;protein_id=WP_075670806.1;transl_table=11 NZ_JAIKUA010000382.1 RefSeq gene 335 1738 . + . ID=gene-L2557_RS17395;Name=L2557_RS17395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17395 NZ_JAIKUA010000382.1 Protein Homology CDS 335 1738 . + 0 ID=cds-WP_075670808.1;Parent=gene-L2557_RS17395;Dbxref=GenBank:WP_075670808.1;Name=WP_075670808.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014657544.1;locus_tag=L2557_RS17395;product=tryptophanase;protein_id=WP_075670808.1;transl_table=11 NZ_JAIKUA010000382.1 RefSeq gene 1811 2200 . + . ID=gene-L2557_RS17400;Name=L2557_RS17400;end_range=2200,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17400;partial=true NZ_JAIKUA010000382.1 Protein Homology CDS 1811 2200 . + 0 ID=cds-WP_328253410.1;Parent=gene-L2557_RS17400;Dbxref=GenBank:WP_328253410.1;Name=WP_328253410.1;Ontology_term=GO:0003333;end_range=2200,.;gbkey=CDS;go_process=amino acid transmembrane transport|0003333||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662888.1;locus_tag=L2557_RS17400;partial=true;product=aromatic amino acid transport family protein;protein_id=WP_328253410.1;transl_table=11 ##sequence-region NZ_JAIKUA010000383.1 1 1821 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000383.1 RefSeq region 1 1821 . + . ID=NZ_JAIKUA010000383.1:1..1821;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000384.1 1 1058 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000384.1 RefSeq region 1 1058 . + . ID=NZ_JAIKUA010000384.1:1..1058;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000384.1 RefSeq gene 1 493 . - . ID=gene-L2557_RS17405;Name=yedE;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=L2557_RS17405;partial=true;start_range=.,1 NZ_JAIKUA010000384.1 Protein Homology CDS 1 493 . - 0 ID=cds-WP_235410258.1;Parent=gene-L2557_RS17405;Dbxref=GenBank:WP_235410258.1;Name=WP_235410258.1;gbkey=CDS;gene=yedE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237334.1;locus_tag=L2557_RS17405;partial=true;product=YedE family putative selenium transporter;protein_id=WP_235410258.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000384.1 RefSeq gene 725 922 . - . ID=gene-L2557_RS17410;Name=L2557_RS17410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17410 NZ_JAIKUA010000384.1 Protein Homology CDS 725 922 . - 0 ID=cds-WP_223673674.1;Parent=gene-L2557_RS17410;Dbxref=GenBank:WP_223673674.1;Name=WP_223673674.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658299.1;locus_tag=L2557_RS17410;product=hypothetical protein;protein_id=WP_223673674.1;transl_table=11 ##sequence-region NZ_JAIKUA010000385.1 1 2005 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000385.1 RefSeq region 1 2005 . + . ID=NZ_JAIKUA010000385.1:1..2005;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000385.1 RefSeq gene 199 846 . + . ID=gene-L2557_RS17415;Name=leuE;gbkey=Gene;gene=leuE;gene_biotype=protein_coding;locus_tag=L2557_RS17415 NZ_JAIKUA010000385.1 Protein Homology CDS 199 846 . + 0 ID=cds-WP_075674315.1;Parent=gene-L2557_RS17415;Dbxref=GenBank:WP_075674315.1;Name=WP_075674315.1;Ontology_term=GO:0006865;gbkey=CDS;gene=leuE;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251219.1;locus_tag=L2557_RS17415;product=leucine efflux protein LeuE;protein_id=WP_075674315.1;transl_table=11 NZ_JAIKUA010000385.1 RefSeq gene 926 1948 . - . ID=gene-L2557_RS17420;Name=L2557_RS17420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17420 NZ_JAIKUA010000385.1 Protein Homology CDS 926 1948 . - 0 ID=cds-WP_235410259.1;Parent=gene-L2557_RS17420;Dbxref=GenBank:WP_235410259.1;Name=WP_235410259.1;Ontology_term=GO:0008171;gbkey=CDS;go_function=O-methyltransferase activity|0008171||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910561.1;locus_tag=L2557_RS17420;product=ArsR family transcriptional regulator;protein_id=WP_235410259.1;transl_table=11 ##sequence-region NZ_JAIKUA010000386.1 1 873 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000386.1 RefSeq region 1 873 . + . ID=NZ_JAIKUA010000386.1:1..873;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000386.1 RefSeq gene 56 873 . + . ID=gene-L2557_RS17425;Name=L2557_RS17425;end_range=873,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17425;partial=true NZ_JAIKUA010000386.1 Protein Homology CDS 56 873 . + 0 ID=cds-WP_235410260.1;Parent=gene-L2557_RS17425;Dbxref=GenBank:WP_235410260.1;Name=WP_235410260.1;Ontology_term=GO:0006355,GO:0003700;end_range=873,.;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250915.1;locus_tag=L2557_RS17425;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_235410260.1;transl_table=11 ##sequence-region NZ_JAIKUA010000387.1 1 1627 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000387.1 RefSeq region 1 1627 . + . ID=NZ_JAIKUA010000387.1:1..1627;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000387.1 RefSeq gene 675 1025 . + . ID=gene-L2557_RS17430;Name=L2557_RS17430;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17430 NZ_JAIKUA010000387.1 Protein Homology CDS 675 1025 . + 0 ID=cds-WP_099659646.1;Parent=gene-L2557_RS17430;Dbxref=GenBank:WP_099659646.1;Name=WP_099659646.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014914006.1;locus_tag=L2557_RS17430;product=immunity protein Imm33 domain-containing protein;protein_id=WP_099659646.1;transl_table=11 NZ_JAIKUA010000387.1 RefSeq gene 1267 1488 . + . ID=gene-L2557_RS17435;Name=L2557_RS17435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17435 NZ_JAIKUA010000387.1 Protein Homology CDS 1267 1488 . + 0 ID=cds-WP_075672624.1;Parent=gene-L2557_RS17435;Dbxref=GenBank:WP_075672624.1;Name=WP_075672624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242534.1;locus_tag=L2557_RS17435;product=DUF465 domain-containing protein;protein_id=WP_075672624.1;transl_table=11 ##sequence-region NZ_JAIKUA010000388.1 1 876 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000388.1 RefSeq region 1 876 . + . ID=NZ_JAIKUA010000388.1:1..876;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000388.1 RefSeq gene 64 876 . - . ID=gene-L2557_RS17440;Name=L2557_RS17440;end_range=876,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17440;partial=true NZ_JAIKUA010000388.1 Protein Homology CDS 64 876 . - 0 ID=cds-WP_235410261.1;Parent=gene-L2557_RS17440;Dbxref=GenBank:WP_235410261.1;Name=WP_235410261.1;Ontology_term=GO:0008168,GO:1904047;end_range=876,.;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537329.1;locus_tag=L2557_RS17440;partial=true;product=class I SAM-dependent methyltransferase;protein_id=WP_235410261.1;transl_table=11 ##sequence-region NZ_JAIKUA010000389.1 1 1668 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000389.1 RefSeq region 1 1668 . + . ID=NZ_JAIKUA010000389.1:1..1668;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000389.1 RefSeq gene 188 544 . + . ID=gene-L2557_RS17445;Name=L2557_RS17445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17445 NZ_JAIKUA010000389.1 GeneMarkS-2+ CDS 188 544 . + 0 ID=cds-WP_099659675.1;Parent=gene-L2557_RS17445;Dbxref=GenBank:WP_099659675.1;Name=WP_099659675.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17445;product=hypothetical protein;protein_id=WP_099659675.1;transl_table=11 NZ_JAIKUA010000389.1 RefSeq gene 687 1502 . - . ID=gene-L2557_RS17450;Name=L2557_RS17450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17450 NZ_JAIKUA010000389.1 Protein Homology CDS 687 1502 . - 0 ID=cds-WP_075673237.1;Parent=gene-L2557_RS17450;Dbxref=GenBank:WP_075673237.1;Name=WP_075673237.1;Ontology_term=GO:0006810,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248165.1;locus_tag=L2557_RS17450;product=sulfite exporter TauE/SafE family protein;protein_id=WP_075673237.1;transl_table=11 ##sequence-region NZ_JAIKUA010000039.1 1 20470 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000039.1 RefSeq region 1 20470 . + . ID=NZ_JAIKUA010000039.1:1..20470;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000039.1 RefSeq gene 537 1196 . + . ID=gene-L2557_RS03705;Name=L2557_RS03705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03705 NZ_JAIKUA010000039.1 Protein Homology CDS 537 1196 . + 0 ID=cds-WP_075671379.1;Parent=gene-L2557_RS03705;Dbxref=GenBank:WP_075671379.1;Name=WP_075671379.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535289.1;locus_tag=L2557_RS03705;product=DedA family protein;protein_id=WP_075671379.1;transl_table=11 NZ_JAIKUA010000039.1 RefSeq gene 1460 1765 . + . ID=gene-L2557_RS03710;Name=L2557_RS03710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03710 NZ_JAIKUA010000039.1 Protein Homology CDS 1460 1765 . + 0 ID=cds-WP_075671381.1;Parent=gene-L2557_RS03710;Dbxref=GenBank:WP_075671381.1;Name=WP_075671381.1;Ontology_term=GO:0043022,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ribosome binding|0043022||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245246.1;locus_tag=L2557_RS03710;product=ElaB/YgaM/YqjD family protein;protein_id=WP_075671381.1;transl_table=11 NZ_JAIKUA010000039.1 RefSeq gene 1772 2182 . + . ID=gene-L2557_RS03715;Name=L2557_RS03715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03715 NZ_JAIKUA010000039.1 Protein Homology CDS 1772 2182 . + 0 ID=cds-WP_099659999.1;Parent=gene-L2557_RS03715;Dbxref=GenBank:WP_099659999.1;Name=WP_099659999.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535291.1;locus_tag=L2557_RS03715;product=phage holin family protein;protein_id=WP_099659999.1;transl_table=11 NZ_JAIKUA010000039.1 RefSeq gene 2163 2468 . + . ID=gene-L2557_RS03720;Name=L2557_RS03720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03720 NZ_JAIKUA010000039.1 Protein Homology CDS 2163 2468 . + 0 ID=cds-WP_223672548.1;Parent=gene-L2557_RS03720;Dbxref=GenBank:WP_223672548.1;Name=WP_223672548.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252663.1;locus_tag=L2557_RS03720;product=YqjK-like family protein;protein_id=WP_223672548.1;transl_table=11 NZ_JAIKUA010000039.1 RefSeq gene 2653 3045 . + . ID=gene-L2557_RS03725;Name=L2557_RS03725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03725 NZ_JAIKUA010000039.1 Protein Homology CDS 2653 3045 . + 0 ID=cds-WP_075671385.1;Parent=gene-L2557_RS03725;Dbxref=GenBank:WP_075671385.1;Name=WP_075671385.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008503138.1;locus_tag=L2557_RS03725;product=DoxX family protein;protein_id=WP_075671385.1;transl_table=11 NZ_JAIKUA010000039.1 RefSeq gene 3134 4036 . - . ID=gene-L2557_RS03730;Name=L2557_RS03730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03730 NZ_JAIKUA010000039.1 Protein Homology CDS 3134 4036 . - 0 ID=cds-WP_036933024.1;Parent=gene-L2557_RS03730;Dbxref=GenBank:WP_036933024.1;Name=WP_036933024.1;Ontology_term=GO:0001216,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription activator activity|0001216||IEA,DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245250.1;locus_tag=L2557_RS03730;product=LysR family transcriptional regulator;protein_id=WP_036933024.1;transl_table=11 NZ_JAIKUA010000039.1 RefSeq gene 4150 4854 . + . ID=gene-L2557_RS03735;Name=L2557_RS03735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03735 NZ_JAIKUA010000039.1 Protein Homology CDS 4150 4854 . + 0 ID=cds-WP_075671387.1;Parent=gene-L2557_RS03735;Dbxref=GenBank:WP_075671387.1;Name=WP_075671387.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245251.1;locus_tag=L2557_RS03735;product=pirin family protein;protein_id=WP_075671387.1;transl_table=11 NZ_JAIKUA010000039.1 RefSeq gene 4922 5297 . - . ID=gene-L2557_RS03740;Name=rnpB;gbkey=Gene;gene=rnpB;gene_biotype=RNase_P_RNA;locus_tag=L2557_RS03740 NZ_JAIKUA010000039.1 cmsearch RNase_P_RNA 4922 5297 . - . ID=rna-L2557_RS03740;Parent=gene-L2557_RS03740;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=L2557_RS03740;product=RNase P RNA component class A NZ_JAIKUA010000039.1 cmsearch exon 4922 5297 . - . ID=exon-L2557_RS03740-1;Parent=rna-L2557_RS03740;Dbxref=RFAM:RF00010;gbkey=ncRNA;gene=rnpB;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=L2557_RS03740;product=RNase P RNA component class A NZ_JAIKUA010000039.1 RefSeq gene 5358 6236 . - . ID=gene-L2557_RS03745;Name=rsmI;gbkey=Gene;gene=rsmI;gene_biotype=protein_coding;locus_tag=L2557_RS03745 NZ_JAIKUA010000039.1 Protein Homology CDS 5358 6236 . - 0 ID=cds-WP_075671389.1;Parent=gene-L2557_RS03745;Dbxref=GenBank:WP_075671389.1;Name=WP_075671389.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rsmI;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245252.1;locus_tag=L2557_RS03745;product=16S rRNA (cytidine(1402)-2'-O)-methyltransferase;protein_id=WP_075671389.1;transl_table=11 NZ_JAIKUA010000039.1 RefSeq gene 6298 8052 . + . ID=gene-L2557_RS03750;Name=L2557_RS03750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03750 NZ_JAIKUA010000039.1 Protein Homology CDS 6298 8052 . + 0 ID=cds-WP_099660000.1;Parent=gene-L2557_RS03750;Dbxref=GenBank:WP_099660000.1;Name=WP_099660000.1;Ontology_term=GO:0008360,GO:0009252,GO:0004553,GO:0019899,GO:0030234;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,enzyme binding|0019899||IEA,enzyme regulator activity|0030234||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368849.1;locus_tag=L2557_RS03750;product=penicillin-binding protein activator;protein_id=WP_099660000.1;transl_table=11 NZ_JAIKUA010000039.1 RefSeq gene 8133 8510 . + . ID=gene-L2557_RS03755;Name=L2557_RS03755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03755 NZ_JAIKUA010000039.1 Protein Homology CDS 8133 8510 . + 0 ID=cds-WP_075671393.1;Parent=gene-L2557_RS03755;Dbxref=GenBank:WP_075671393.1;Name=WP_075671393.1;Ontology_term=GO:0003676,GO:0004518;gbkey=CDS;go_function=nucleic acid binding|0003676||IEA,nuclease activity|0004518||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245256.1;locus_tag=L2557_RS03755;product=YraN family protein;protein_id=WP_075671393.1;transl_table=11 NZ_JAIKUA010000039.1 RefSeq gene 8533 9123 . + . ID=gene-L2557_RS03760;Name=diaA;gbkey=Gene;gene=diaA;gene_biotype=protein_coding;locus_tag=L2557_RS03760 NZ_JAIKUA010000039.1 Protein Homology CDS 8533 9123 . + 0 ID=cds-WP_004245257.1;Parent=gene-L2557_RS03760;Dbxref=GenBank:WP_004245257.1;Name=WP_004245257.1;gbkey=CDS;gene=diaA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312057.1;locus_tag=L2557_RS03760;product=DnaA initiator-associating protein DiaA;protein_id=WP_004245257.1;transl_table=11 NZ_JAIKUA010000039.1 RefSeq gene 9133 9711 . + . ID=gene-L2557_RS03765;Name=dolP;gbkey=Gene;gene=dolP;gene_biotype=protein_coding;locus_tag=L2557_RS03765 NZ_JAIKUA010000039.1 Protein Homology CDS 9133 9711 . + 0 ID=cds-WP_036933029.1;Parent=gene-L2557_RS03765;Dbxref=GenBank:WP_036933029.1;Name=WP_036933029.1;Ontology_term=GO:0006970;gbkey=CDS;gene=dolP;go_process=response to osmotic stress|0006970||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245258.1;locus_tag=L2557_RS03765;product=division/outer membrane stress-associated lipid-binding lipoprotein;protein_id=WP_036933029.1;transl_table=11 NZ_JAIKUA010000039.1 RefSeq gene 9826 10443 . - . ID=gene-L2557_RS03770;Name=ureG;gbkey=Gene;gene=ureG;gene_biotype=protein_coding;locus_tag=L2557_RS03770 NZ_JAIKUA010000039.1 Protein Homology CDS 9826 10443 . - 0 ID=cds-WP_006535303.1;Parent=gene-L2557_RS03770;Dbxref=GenBank:WP_006535303.1;Name=WP_006535303.1;Ontology_term=GO:0019627,GO:0003924,GO:0016530,GO:0046872;gbkey=CDS;gene=ureG;go_function=GTPase activity|0003924||IEA,metallochaperone activity|0016530||IEA,metal ion binding|0046872||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257918.1;locus_tag=L2557_RS03770;product=urease accessory protein UreG;protein_id=WP_006535303.1;transl_table=11 NZ_JAIKUA010000039.1 RefSeq gene 10453 11118 . - . ID=gene-L2557_RS03775;Name=L2557_RS03775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03775 NZ_JAIKUA010000039.1 Protein Homology CDS 10453 11118 . - 0 ID=cds-WP_075671395.1;Parent=gene-L2557_RS03775;Dbxref=GenBank:WP_075671395.1;Name=WP_075671395.1;Ontology_term=GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248934.1;locus_tag=L2557_RS03775;product=urease accessory protein UreF;protein_id=WP_075671395.1;transl_table=11 NZ_JAIKUA010000039.1 RefSeq gene 11143 11637 . - . ID=gene-L2557_RS03780;Name=ureE;gbkey=Gene;gene=ureE;gene_biotype=protein_coding;locus_tag=L2557_RS03780 NZ_JAIKUA010000039.1 Protein Homology CDS 11143 11637 . - 0 ID=cds-WP_159241736.1;Parent=gene-L2557_RS03780;Dbxref=GenBank:WP_159241736.1;Name=WP_159241736.1;Ontology_term=GO:0006457,GO:0019627,GO:0065003,GO:0016151;gbkey=CDS;gene=ureE;go_function=nickel cation binding|0016151||IEA;go_process=protein folding|0006457||IEA,urea metabolic process|0019627||IEA,protein-containing complex assembly|0065003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535305.1;locus_tag=L2557_RS03780;product=urease accessory protein UreE;protein_id=WP_159241736.1;transl_table=11 NZ_JAIKUA010000039.1 RefSeq gene 11663 13366 . - . ID=gene-L2557_RS03785;Name=ureC;gbkey=Gene;gene=ureC;gene_biotype=protein_coding;locus_tag=L2557_RS03785 NZ_JAIKUA010000039.1 Protein Homology CDS 11663 13366 . - 0 ID=cds-WP_075671399.1;Parent=gene-L2557_RS03785;Dbxref=GenBank:WP_075671399.1;Name=WP_075671399.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureC;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008806533.1;locus_tag=L2557_RS03785;product=urease subunit alpha;protein_id=WP_075671399.1;transl_table=11 NZ_JAIKUA010000039.1 RefSeq gene 13363 13689 . - . ID=gene-L2557_RS03790;Name=L2557_RS03790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03790 NZ_JAIKUA010000039.1 Protein Homology CDS 13363 13689 . - 0 ID=cds-WP_099660003.1;Parent=gene-L2557_RS03790;Dbxref=GenBank:WP_099660003.1;Name=WP_099660003.1;Ontology_term=GO:0043419,GO:0035550;gbkey=CDS;go_component=urease complex|0035550||IEA;go_process=urea catabolic process|0043419||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245263.1;locus_tag=L2557_RS03790;product=urease subunit beta;protein_id=WP_099660003.1;transl_table=11 NZ_JAIKUA010000039.1 RefSeq gene 13698 14000 . - . ID=gene-L2557_RS03795;Name=ureA;gbkey=Gene;gene=ureA;gene_biotype=protein_coding;locus_tag=L2557_RS03795 NZ_JAIKUA010000039.1 Protein Homology CDS 13698 14000 . - 0 ID=cds-WP_075671403.1;Parent=gene-L2557_RS03795;Dbxref=GenBank:WP_075671403.1;Name=WP_075671403.1;Ontology_term=GO:0019627,GO:0009039,GO:0016151;gbkey=CDS;gene=ureA;go_function=urease activity|0009039||IEA,nickel cation binding|0016151||IEA;go_process=urea metabolic process|0019627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228896.1;locus_tag=L2557_RS03795;product=urease subunit gamma;protein_id=WP_075671403.1;transl_table=11 NZ_JAIKUA010000039.1 RefSeq gene 14022 14858 . - . ID=gene-L2557_RS03800;Name=L2557_RS03800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03800 NZ_JAIKUA010000039.1 Protein Homology CDS 14022 14858 . - 0 ID=cds-WP_075671405.1;Parent=gene-L2557_RS03800;Dbxref=GenBank:WP_075671405.1;Name=WP_075671405.1;Ontology_term=GO:0008152,GO:0016151;gbkey=CDS;go_function=nickel cation binding|0016151||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248933.1;locus_tag=L2557_RS03800;product=urease accessory protein UreD;protein_id=WP_075671405.1;transl_table=11 NZ_JAIKUA010000039.1 RefSeq gene 15353 16243 . + . ID=gene-L2557_RS03805;Name=L2557_RS03805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03805 NZ_JAIKUA010000039.1 Protein Homology CDS 15353 16243 . + 0 ID=cds-WP_075671407.1;Parent=gene-L2557_RS03805;Dbxref=GenBank:WP_075671407.1;Name=WP_075671407.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245268.1;locus_tag=L2557_RS03805;product=AraC family transcriptional regulator;protein_id=WP_075671407.1;transl_table=11 NZ_JAIKUA010000039.1 RefSeq gene 16246 16947 . - . ID=gene-L2557_RS03810;Name=mtgA;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=L2557_RS03810 NZ_JAIKUA010000039.1 Protein Homology CDS 16246 16947 . - 0 ID=cds-WP_099660004.1;Parent=gene-L2557_RS03810;Dbxref=GenBank:WP_099660004.1;Name=WP_099660004.1;Ontology_term=GO:0009252,GO:0016763,GO:0009274,GO:0016020;gbkey=CDS;gene=mtgA;go_component=peptidoglycan-based cell wall|0009274||IEA,membrane|0016020||IEA;go_function=pentosyltransferase activity|0016763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245269.1;locus_tag=L2557_RS03810;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=WP_099660004.1;transl_table=11 NZ_JAIKUA010000039.1 RefSeq gene 16968 17618 . - . ID=gene-L2557_RS03815;Name=elbB;gbkey=Gene;gene=elbB;gene_biotype=protein_coding;locus_tag=L2557_RS03815 NZ_JAIKUA010000039.1 Protein Homology CDS 16968 17618 . - 0 ID=cds-WP_099660005.1;Parent=gene-L2557_RS03815;Dbxref=GenBank:WP_099660005.1;Name=WP_099660005.1;gbkey=CDS;gene=elbB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368845.1;locus_tag=L2557_RS03815;product=isoprenoid biosynthesis glyoxalase ElbB;protein_id=WP_099660005.1;transl_table=11 NZ_JAIKUA010000039.1 RefSeq gene 17856 20192 . - . ID=gene-L2557_RS03820;Name=arcB;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=L2557_RS03820 NZ_JAIKUA010000039.1 Protein Homology CDS 17856 20192 . - 0 ID=cds-WP_075671413.1;Parent=gene-L2557_RS03820;Dbxref=GenBank:WP_075671413.1;Name=WP_075671413.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0016020;gbkey=CDS;gene=arcB;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210142.1;locus_tag=L2557_RS03820;product=aerobic respiration two-component sensor histidine kinase ArcB;protein_id=WP_075671413.1;transl_table=11 ##sequence-region NZ_JAIKUA010000390.1 1 722 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000390.1 RefSeq region 1 722 . + . ID=NZ_JAIKUA010000390.1:1..722;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000390.1 RefSeq gene 123 671 . + . ID=gene-L2557_RS17455;Name=L2557_RS17455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17455 NZ_JAIKUA010000390.1 Protein Homology CDS 123 671 . + 0 ID=cds-WP_075670446.1;Parent=gene-L2557_RS17455;Dbxref=GenBank:WP_075670446.1;Name=WP_075670446.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243875.1;locus_tag=L2557_RS17455;product=fimbrial protein;protein_id=WP_075670446.1;transl_table=11 ##sequence-region NZ_JAIKUA010000391.1 1 3175 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000391.1 RefSeq region 1 3175 . + . ID=NZ_JAIKUA010000391.1:1..3175;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000391.1 RefSeq gene 101 1462 . - . ID=gene-L2557_RS17460;Name=L2557_RS17460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17460 NZ_JAIKUA010000391.1 Protein Homology CDS 101 1462 . - 0 ID=cds-WP_075670844.1;Parent=gene-L2557_RS17460;Dbxref=GenBank:WP_075670844.1;Name=WP_075670844.1;Ontology_term=GO:0015031,GO:0030253,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=protein transport|0015031||IEA,protein secretion by the type I secretion system|0030253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017627939.1;locus_tag=L2557_RS17460;product=HlyD family type I secretion periplasmic adaptor subunit;protein_id=WP_075670844.1;transl_table=11 NZ_JAIKUA010000391.1 RefSeq gene 1465 3175 . - . ID=gene-L2557_RS17465;Name=L2557_RS17465;end_range=3175,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17465;partial=true NZ_JAIKUA010000391.1 Protein Homology CDS 1465 3175 . - 1 ID=cds-WP_235410262.1;Parent=gene-L2557_RS17465;Dbxref=GenBank:WP_235410262.1;Name=WP_235410262.1;Ontology_term=GO:0005524,GO:0008233,GO:0016887,GO:0042626,GO:0140359,GO:0055052;end_range=3175,.;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATP binding|0005524||IEA,peptidase activity|0008233||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248532.1;locus_tag=L2557_RS17465;partial=true;product=peptidase domain-containing ABC transporter;protein_id=WP_235410262.1;transl_table=11 ##sequence-region NZ_JAIKUA010000392.1 1 495 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000392.1 RefSeq region 1 495 . + . ID=NZ_JAIKUA010000392.1:1..495;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000392.1 RefSeq pseudogene 1 252 . + . ID=gene-L2557_RS17470;Name=L2557_RS17470;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17470;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000392.1 Protein Homology CDS 1 252 . + 0 ID=cds-L2557_RS17470;Parent=gene-L2557_RS17470;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249116.1;locus_tag=L2557_RS17470;partial=true;product=methyl-accepting chemotaxis protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000393.1 1 1160 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000393.1 RefSeq region 1 1160 . + . ID=NZ_JAIKUA010000393.1:1..1160;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000393.1 RefSeq pseudogene 1 634 . - . ID=gene-L2557_RS17475;Name=L2557_RS17475;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17475;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000393.1 GeneMarkS-2+ CDS 1 634 . - 0 ID=cds-L2557_RS17475;Parent=gene-L2557_RS17475;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17475;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAIKUA010000393.1 RefSeq gene 636 1142 . - . ID=gene-L2557_RS17480;Name=sicA;gbkey=Gene;gene=sicA;gene_biotype=protein_coding;locus_tag=L2557_RS17480 NZ_JAIKUA010000393.1 Protein Homology CDS 636 1142 . - 0 ID=cds-WP_075673505.1;Parent=gene-L2557_RS17480;Dbxref=GenBank:WP_075673505.1;Name=WP_075673505.1;gbkey=CDS;gene=sicA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245829.1;locus_tag=L2557_RS17480;product=type III secretion system translocator chaperone SicA;protein_id=WP_075673505.1;transl_table=11 ##sequence-region NZ_JAIKUA010000394.1 1 973 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000394.1 RefSeq region 1 973 . + . ID=NZ_JAIKUA010000394.1:1..973;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000394.1 RefSeq gene 92 493 . - . ID=gene-L2557_RS17485;Name=L2557_RS17485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17485 NZ_JAIKUA010000394.1 GeneMarkS-2+ CDS 92 493 . - 0 ID=cds-WP_075674330.1;Parent=gene-L2557_RS17485;Dbxref=GenBank:WP_075674330.1;Name=WP_075674330.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17485;product=hypothetical protein;protein_id=WP_075674330.1;transl_table=11 NZ_JAIKUA010000394.1 RefSeq pseudogene 508 973 . - . ID=gene-L2557_RS17490;Name=L2557_RS17490;end_range=973,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17490;partial=true;pseudo=true NZ_JAIKUA010000394.1 GeneMarkS-2+ CDS 508 973 . - 1 ID=cds-L2557_RS17490;Parent=gene-L2557_RS17490;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=973,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17490;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAIKUA010000395.1 1 713 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000395.1 RefSeq region 1 713 . + . ID=NZ_JAIKUA010000395.1:1..713;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000395.1 RefSeq gene 1 713 . + . ID=gene-L2557_RS17495;Name=L2557_RS17495;end_range=713,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17495;partial=true;start_range=.,1 NZ_JAIKUA010000395.1 Protein Homology CDS 1 713 . + 2 ID=cds-WP_235410263.1;Parent=gene-L2557_RS17495;Dbxref=GenBank:WP_235410263.1;Name=WP_235410263.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;end_range=713,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: protein motif:HMM:NF012786.6;locus_tag=L2557_RS17495;partial=true;product=fimbria/pilus outer membrane usher protein;protein_id=WP_235410263.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000396.1 1 1015 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000396.1 RefSeq region 1 1015 . + . ID=NZ_JAIKUA010000396.1:1..1015;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000396.1 RefSeq gene 275 874 . - . ID=gene-L2557_RS17500;Name=nqrE;gbkey=Gene;gene=nqrE;gene_biotype=protein_coding;locus_tag=L2557_RS17500 NZ_JAIKUA010000396.1 Protein Homology CDS 275 874 . - 0 ID=cds-WP_099659653.1;Parent=gene-L2557_RS17500;Dbxref=GenBank:WP_099659653.1;Name=WP_099659653.1;Ontology_term=GO:0006814,GO:0016655;gbkey=CDS;gene=nqrE;go_function=oxidoreductase activity%2C acting on NAD(P)H%2C quinone or similar compound as acceptor|0016655||IEA;go_process=sodium ion transport|0006814||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011906232.1;locus_tag=L2557_RS17500;product=NADH:ubiquinone reductase (Na(+)-transporting) subunit E;protein_id=WP_099659653.1;transl_table=11 ##sequence-region NZ_JAIKUA010000397.1 1 557 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000397.1 RefSeq region 1 557 . + . ID=NZ_JAIKUA010000397.1:1..557;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000397.1 RefSeq gene 3 380 . - . ID=gene-L2557_RS17505;Name=L2557_RS17505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17505 NZ_JAIKUA010000397.1 Protein Homology CDS 3 380 . - 0 ID=cds-WP_223672418.1;Parent=gene-L2557_RS17505;Dbxref=GenBank:WP_223672418.1;Name=WP_223672418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242924.1;locus_tag=L2557_RS17505;product=lysozyme inhibitor LprI family protein;protein_id=WP_223672418.1;transl_table=11 ##sequence-region NZ_JAIKUA010000398.1 1 1547 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000398.1 RefSeq region 1 1547 . + . ID=NZ_JAIKUA010000398.1:1..1547;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000398.1 RefSeq gene 1 456 . - . ID=gene-L2557_RS17510;Name=L2557_RS17510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17510;partial=true;start_range=.,1 NZ_JAIKUA010000398.1 Protein Homology CDS 1 456 . - 0 ID=cds-WP_235410264.1;Parent=gene-L2557_RS17510;Dbxref=GenBank:WP_235410264.1;Name=WP_235410264.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910448.1;locus_tag=L2557_RS17510;partial=true;product=hypothetical protein;protein_id=WP_235410264.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000398.1 RefSeq gene 535 777 . - . ID=gene-L2557_RS17515;Name=L2557_RS17515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17515 NZ_JAIKUA010000398.1 GeneMarkS-2+ CDS 535 777 . - 0 ID=cds-WP_099660464.1;Parent=gene-L2557_RS17515;Dbxref=GenBank:WP_099660464.1;Name=WP_099660464.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17515;product=hypothetical protein;protein_id=WP_099660464.1;transl_table=11 NZ_JAIKUA010000398.1 RefSeq gene 861 1133 . - . ID=gene-L2557_RS17520;Name=L2557_RS17520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17520 NZ_JAIKUA010000398.1 GeneMarkS-2+ CDS 861 1133 . - 0 ID=cds-WP_099660463.1;Parent=gene-L2557_RS17520;Dbxref=GenBank:WP_099660463.1;Name=WP_099660463.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17520;product=hypothetical protein;protein_id=WP_099660463.1;transl_table=11 ##sequence-region NZ_JAIKUA010000399.1 1 962 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000399.1 RefSeq region 1 962 . + . ID=NZ_JAIKUA010000399.1:1..962;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000399.1 RefSeq gene 407 883 . - . ID=gene-L2557_RS17525;Name=L2557_RS17525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17525 NZ_JAIKUA010000399.1 Protein Homology CDS 407 883 . - 0 ID=cds-WP_075671119.1;Parent=gene-L2557_RS17525;Dbxref=GenBank:WP_075671119.1;Name=WP_075671119.1;Ontology_term=GO:0009132,GO:0016817,GO:0046872;gbkey=CDS;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA,metal ion binding|0046872||IEA;go_process=nucleoside diphosphate metabolic process|0009132||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237553.1;locus_tag=L2557_RS17525;product=NUDIX hydrolase;protein_id=WP_075671119.1;transl_table=11 ##sequence-region NZ_JAIKUA010000004.1 1 681 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000004.1 RefSeq region 1 681 . + . ID=NZ_JAIKUA010000004.1:1..681;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000004.1 RefSeq gene 1 616 . + . ID=gene-L2557_RS00510;Name=L2557_RS00510;gbkey=Gene;gene_biotype=rRNA;locus_tag=L2557_RS00510;partial=true;start_range=.,1 NZ_JAIKUA010000004.1 cmsearch rRNA 1 616 . + . ID=rna-L2557_RS00510;Parent=gene-L2557_RS00510;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=L2557_RS00510;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JAIKUA010000004.1 cmsearch exon 1 616 . + . ID=exon-L2557_RS00510-1;Parent=rna-L2557_RS00510;Dbxref=RFAM:RF02541;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=L2557_RS00510;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JAIKUA010000040.1 1 41873 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000040.1 RefSeq region 1 41873 . + . ID=NZ_JAIKUA010000040.1:1..41873;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000040.1 RefSeq gene 342 1733 . - . ID=gene-L2557_RS03825;Name=cpxA;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=L2557_RS03825 NZ_JAIKUA010000040.1 Protein Homology CDS 342 1733 . - 0 ID=cds-WP_088494095.1;Parent=gene-L2557_RS03825;Dbxref=GenBank:WP_088494095.1;Name=WP_088494095.1;Ontology_term=GO:0007165,GO:0000155;gbkey=CDS;gene=cpxA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249722.1;locus_tag=L2557_RS03825;product=envelope stress sensor histidine kinase CpxA;protein_id=WP_088494095.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 1746 2444 . - . ID=gene-L2557_RS03830;Name=cpxR;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=L2557_RS03830 NZ_JAIKUA010000040.1 Protein Homology CDS 1746 2444 . - 0 ID=cds-WP_023583423.1;Parent=gene-L2557_RS03830;Dbxref=GenBank:WP_023583423.1;Name=WP_023583423.1;gbkey=CDS;gene=cpxR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208970.1;locus_tag=L2557_RS03830;product=envelope stress response regulator transcription factor CpxR;protein_id=WP_023583423.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 2656 3207 . + . ID=gene-L2557_RS03835;Name=cpxP;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=L2557_RS03835 NZ_JAIKUA010000040.1 Protein Homology CDS 2656 3207 . + 0 ID=cds-WP_075673003.1;Parent=gene-L2557_RS03835;Dbxref=GenBank:WP_075673003.1;Name=WP_075673003.1;gbkey=CDS;gene=cpxP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249721.1;locus_tag=L2557_RS03835;product=cell-envelope stress modulator CpxP;protein_id=WP_075673003.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 3378 4118 . - . ID=gene-L2557_RS03840;Name=L2557_RS03840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03840 NZ_JAIKUA010000040.1 Protein Homology CDS 3378 4118 . - 0 ID=cds-WP_099659473.1;Parent=gene-L2557_RS03840;Dbxref=GenBank:WP_099659473.1;Name=WP_099659473.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016377.6;locus_tag=L2557_RS03840;product=glycosyltransferase family 32 protein;protein_id=WP_099659473.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 4255 5799 . - . ID=gene-L2557_RS03845;Name=L2557_RS03845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03845 NZ_JAIKUA010000040.1 Protein Homology CDS 4255 5799 . - 0 ID=cds-WP_235409835.1;Parent=gene-L2557_RS03845;Dbxref=GenBank:WP_235409835.1;Name=WP_235409835.1;Ontology_term=GO:0009244,GO:1900727,GO:0016776;gbkey=CDS;go_function=phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA,osmoregulated periplasmic glucan biosynthetic process|1900727||IEA;inference=COORDINATES: protein motif:HMM:NF013080.6;locus_tag=L2557_RS03845;product=phosphoethanolamine transferase;protein_id=WP_235409835.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 5923 6678 . - . ID=gene-L2557_RS03850;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=L2557_RS03850 NZ_JAIKUA010000040.1 Protein Homology CDS 5923 6678 . - 0 ID=cds-WP_109419649.1;Parent=gene-L2557_RS03850;Dbxref=GenBank:WP_109419649.1;Name=WP_109419649.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fabG;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628683.1;locus_tag=L2557_RS03850;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_109419649.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 7212 8189 . + . ID=gene-L2557_RS03855;Name=pfkA;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=L2557_RS03855 NZ_JAIKUA010000040.1 Protein Homology CDS 7212 8189 . + 0 ID=cds-WP_159242283.1;Parent=gene-L2557_RS03855;Dbxref=GenBank:WP_159242283.1;Name=WP_159242283.1;Ontology_term=GO:0006002,GO:0006096,GO:0005524;gbkey=CDS;gene=pfkA;go_function=ATP binding|0005524||IEA;go_process=fructose 6-phosphate metabolic process|0006002||IEA,glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004265237.1;locus_tag=L2557_RS03855;product=6-phosphofructokinase;protein_id=WP_159242283.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 8453 9454 . + . ID=gene-L2557_RS03860;Name=L2557_RS03860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03860 NZ_JAIKUA010000040.1 Protein Homology CDS 8453 9454 . + 0 ID=cds-WP_099659470.1;Parent=gene-L2557_RS03860;Dbxref=GenBank:WP_099659470.1;Name=WP_099659470.1;Ontology_term=GO:1902358,GO:0015419;gbkey=CDS;go_function=ABC-type sulfate transporter activity|0015419||IEA;go_process=sulfate transmembrane transport|1902358||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534168.1;locus_tag=L2557_RS03860;product=sulfate ABC transporter substrate-binding protein;protein_id=WP_099659470.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 9560 10330 . - . ID=gene-L2557_RS03865;Name=tpiA;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=L2557_RS03865 NZ_JAIKUA010000040.1 Protein Homology CDS 9560 10330 . - 0 ID=cds-WP_069366847.1;Parent=gene-L2557_RS03865;Dbxref=GenBank:WP_069366847.1;Name=WP_069366847.1;Ontology_term=GO:0006096,GO:0004807;gbkey=CDS;gene=tpiA;go_function=triose-phosphate isomerase activity|0004807||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249716.1;locus_tag=L2557_RS03865;product=triose-phosphate isomerase;protein_id=WP_069366847.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 10437 11072 . - . ID=gene-L2557_RS03870;Name=L2557_RS03870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03870 NZ_JAIKUA010000040.1 Protein Homology CDS 10437 11072 . - 0 ID=cds-WP_099659469.1;Parent=gene-L2557_RS03870;Dbxref=GenBank:WP_099659469.1;Name=WP_099659469.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249899.1;locus_tag=L2557_RS03870;product=DUF1454 family protein;protein_id=WP_099659469.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 11170 11601 . + . ID=gene-L2557_RS03875;Name=L2557_RS03875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03875 NZ_JAIKUA010000040.1 Protein Homology CDS 11170 11601 . + 0 ID=cds-WP_075672997.1;Parent=gene-L2557_RS03875;Dbxref=GenBank:WP_075672997.1;Name=WP_075672997.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249714.1;locus_tag=L2557_RS03875;product=DUF805 domain-containing protein;protein_id=WP_075672997.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 11667 12413 . - . ID=gene-L2557_RS03880;Name=fpr;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=L2557_RS03880 NZ_JAIKUA010000040.1 Protein Homology CDS 11667 12413 . - 0 ID=cds-WP_235409836.1;Parent=gene-L2557_RS03880;Dbxref=GenBank:WP_235409836.1;Name=WP_235409836.1;Ontology_term=GO:0004324;gbkey=CDS;gene=fpr;go_function=ferredoxin-NADP+ reductase activity|0004324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208956.1;locus_tag=L2557_RS03880;product=ferredoxin--NADP(+) reductase;protein_id=WP_235409836.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 12752 13936 . + . ID=gene-L2557_RS03885;Name=emrD;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=L2557_RS03885 NZ_JAIKUA010000040.1 Protein Homology CDS 12752 13936 . + 0 ID=cds-WP_099659467.1;Parent=gene-L2557_RS03885;Dbxref=GenBank:WP_099659467.1;Name=WP_099659467.1;Ontology_term=GO:0042908,GO:0042910,GO:0016020;gbkey=CDS;gene=emrD;go_component=membrane|0016020||IEA;go_function=xenobiotic transmembrane transporter activity|0042910||IEA;go_process=xenobiotic transport|0042908||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165352.1;locus_tag=L2557_RS03885;product=multidrug efflux MFS transporter EmrD;protein_id=WP_099659467.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 14038 15570 . - . ID=gene-L2557_RS03890;Name=glpK;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=L2557_RS03890 NZ_JAIKUA010000040.1 Protein Homology CDS 14038 15570 . - 0 ID=cds-WP_075672994.1;Parent=gene-L2557_RS03890;Dbxref=GenBank:WP_075672994.1;Name=WP_075672994.1;Ontology_term=GO:0006072,GO:0004370;gbkey=CDS;gene=glpK;go_function=glycerol kinase activity|0004370||IEA;go_process=glycerol-3-phosphate metabolic process|0006072||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246422.1;locus_tag=L2557_RS03890;product=glycerol kinase GlpK;protein_id=WP_075672994.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 15613 16428 . - . ID=gene-L2557_RS03895;Name=L2557_RS03895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03895 NZ_JAIKUA010000040.1 Protein Homology CDS 15613 16428 . - 0 ID=cds-WP_099659466.1;Parent=gene-L2557_RS03895;Dbxref=GenBank:WP_099659466.1;Name=WP_099659466.1;Ontology_term=GO:0055085,GO:0015267;gbkey=CDS;go_function=channel activity|0015267||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246421.1;locus_tag=L2557_RS03895;product=MIP/aquaporin family protein;protein_id=WP_099659466.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 16723 16965 . + . ID=gene-L2557_RS03900;Name=zapB;gbkey=Gene;gene=zapB;gene_biotype=protein_coding;locus_tag=L2557_RS03900 NZ_JAIKUA010000040.1 Protein Homology CDS 16723 16965 . + 0 ID=cds-WP_036933299.1;Parent=gene-L2557_RS03900;Dbxref=GenBank:WP_036933299.1;Name=WP_036933299.1;Ontology_term=GO:0043093,GO:0090529,GO:0005737;gbkey=CDS;gene=zapB;go_component=cytoplasm|0005737||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA,cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368679.1;locus_tag=L2557_RS03900;product=cell division protein ZapB;protein_id=WP_036933299.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 17060 17563 . - . ID=gene-L2557_RS03905;Name=rraA;gbkey=Gene;gene=rraA;gene_biotype=protein_coding;locus_tag=L2557_RS03905 NZ_JAIKUA010000040.1 Protein Homology CDS 17060 17563 . - 0 ID=cds-WP_075672992.1;Parent=gene-L2557_RS03905;Dbxref=GenBank:WP_075672992.1;Name=WP_075672992.1;Ontology_term=GO:0051252,GO:0008428;gbkey=CDS;gene=rraA;go_function=ribonuclease inhibitor activity|0008428||IEA;go_process=regulation of RNA metabolic process|0051252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012990532.1;locus_tag=L2557_RS03905;product=ribonuclease E activity regulator RraA;protein_id=WP_075672992.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 17673 18590 . - . ID=gene-L2557_RS03910;Name=L2557_RS03910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03910 NZ_JAIKUA010000040.1 Protein Homology CDS 17673 18590 . - 0 ID=cds-WP_075672991.1;Parent=gene-L2557_RS03910;Dbxref=GenBank:WP_075672991.1;Name=WP_075672991.1;Ontology_term=GO:0009234,GO:0046428,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase activity|0046428||IEA;go_process=menaquinone biosynthetic process|0009234||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249897.1;locus_tag=L2557_RS03910;product=1%2C4-dihydroxy-2-naphthoate polyprenyltransferase;protein_id=WP_075672991.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 18688 20022 . - . ID=gene-L2557_RS03915;Name=hslU;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=L2557_RS03915 NZ_JAIKUA010000040.1 Protein Homology CDS 18688 20022 . - 0 ID=cds-WP_075672990.1;Parent=gene-L2557_RS03915;Dbxref=GenBank:WP_075672990.1;Name=WP_075672990.1;Ontology_term=GO:0006508,GO:0004176,GO:0005524,GO:0009376;gbkey=CDS;gene=hslU;go_component=HslUV protease complex|0009376||IEA;go_function=ATP-dependent peptidase activity|0004176||IEA,ATP binding|0005524||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019841241.1;locus_tag=L2557_RS03915;product=HslU--HslV peptidase ATPase subunit;protein_id=WP_075672990.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 20035 20565 . - . ID=gene-L2557_RS03920;Name=hslV;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=L2557_RS03920 NZ_JAIKUA010000040.1 Protein Homology CDS 20035 20565 . - 0 ID=cds-WP_006534149.1;Parent=gene-L2557_RS03920;Dbxref=GenBank:WP_006534149.1;Name=WP_006534149.1;Ontology_term=GO:0051603,GO:0004298,GO:0009376;gbkey=CDS;gene=hslV;go_component=HslUV protease complex|0009376||IEA;go_function=threonine-type endopeptidase activity|0004298||IEA;go_process=proteolysis involved in protein catabolic process|0051603||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246416.1;locus_tag=L2557_RS03920;product=ATP-dependent protease subunit HslV;protein_id=WP_006534149.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 20680 21471 . - . ID=gene-L2557_RS03925;Name=L2557_RS03925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03925 NZ_JAIKUA010000040.1 Protein Homology CDS 20680 21471 . - 0 ID=cds-WP_075672989.1;Parent=gene-L2557_RS03925;Dbxref=GenBank:WP_075672989.1;Name=WP_075672989.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002208941.1;locus_tag=L2557_RS03925;product=SPOR domain-containing protein;protein_id=WP_075672989.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 21542 22573 . - . ID=gene-L2557_RS03930;Name=cytR;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=L2557_RS03930 NZ_JAIKUA010000040.1 Protein Homology CDS 21542 22573 . - 0 ID=cds-WP_072064648.1;Parent=gene-L2557_RS03930;Dbxref=GenBank:WP_072064648.1;Name=WP_072064648.1;Ontology_term=GO:0006355,GO:0003677;gbkey=CDS;gene=cytR;go_function=DNA binding|0003677||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249710.1;locus_tag=L2557_RS03930;product=DNA-binding transcriptional regulator CytR;protein_id=WP_072064648.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 22880 25081 . - . ID=gene-L2557_RS03935;Name=priA;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=L2557_RS03935 NZ_JAIKUA010000040.1 Protein Homology CDS 22880 25081 . - 0 ID=cds-WP_075672988.1;Parent=gene-L2557_RS03935;Dbxref=GenBank:WP_075672988.1;Name=WP_075672988.1;gbkey=CDS;gene=priA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249709.1;locus_tag=L2557_RS03935;product=primosomal protein N';protein_id=WP_075672988.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 25285 25497 . + . ID=gene-L2557_RS03940;Name=rpmE;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=L2557_RS03940 NZ_JAIKUA010000040.1 Protein Homology CDS 25285 25497 . + 0 ID=cds-WP_006534140.1;Parent=gene-L2557_RS03940;Dbxref=GenBank:WP_006534140.1;Name=WP_006534140.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpmE;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312890.1;locus_tag=L2557_RS03940;product=50S ribosomal protein L31;protein_id=WP_006534140.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 25632 25949 . - . ID=gene-L2557_RS03945;Name=metJ;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=L2557_RS03945 NZ_JAIKUA010000040.1 Protein Homology CDS 25632 25949 . - 0 ID=cds-WP_006534139.1;Parent=gene-L2557_RS03945;Dbxref=GenBank:WP_006534139.1;Name=WP_006534139.1;gbkey=CDS;gene=metJ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015855437.1;locus_tag=L2557_RS03945;product=met regulon transcriptional regulator MetJ;protein_id=WP_006534139.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 26232 27392 . + . ID=gene-L2557_RS03950;Name=metB;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=L2557_RS03950 NZ_JAIKUA010000040.1 Protein Homology CDS 26232 27392 . + 0 ID=cds-WP_099659465.1;Parent=gene-L2557_RS03950;Dbxref=GenBank:WP_099659465.1;Name=WP_099659465.1;Ontology_term=GO:0019346,GO:0003824,GO:0030170;gbkey=CDS;gene=metB;go_function=catalytic activity|0003824||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=transsulfuration|0019346||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628678.1;locus_tag=L2557_RS03950;product=cystathionine gamma-synthase;protein_id=WP_099659465.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 27402 29840 . + . ID=gene-L2557_RS03955;Name=L2557_RS03955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03955 NZ_JAIKUA010000040.1 Protein Homology CDS 27402 29840 . + 0 ID=cds-WP_235409837.1;Parent=gene-L2557_RS03955;Dbxref=GenBank:WP_235409837.1;Name=WP_235409837.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534137.1;locus_tag=L2557_RS03955;product=bifunctional aspartate kinase/homoserine dehydrogenase II;protein_id=WP_235409837.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 30762 33398 . + . ID=gene-L2557_RS03960;Name=ppc;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=L2557_RS03960 NZ_JAIKUA010000040.1 Protein Homology CDS 30762 33398 . + 0 ID=cds-WP_075672985.1;Parent=gene-L2557_RS03960;Dbxref=GenBank:WP_075672985.1;Name=WP_075672985.1;Ontology_term=GO:0006099,GO:0015977,GO:0008964;gbkey=CDS;gene=ppc;go_function=phosphoenolpyruvate carboxylase activity|0008964||IEA;go_process=tricarboxylic acid cycle|0006099||IEA,carbon fixation|0015977||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080279.1;locus_tag=L2557_RS03960;product=phosphoenolpyruvate carboxylase;protein_id=WP_075672985.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 33460 34437 . - . ID=gene-L2557_RS03965;Name=L2557_RS03965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03965 NZ_JAIKUA010000040.1 Protein Homology CDS 33460 34437 . - 0 ID=cds-WP_099659462.1;Parent=gene-L2557_RS03965;Dbxref=GenBank:WP_099659462.1;Name=WP_099659462.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628677.1;locus_tag=L2557_RS03965;product=glycosyltransferase;protein_id=WP_099659462.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 34477 35907 . - . ID=gene-L2557_RS03970;Name=phrB;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=L2557_RS03970 NZ_JAIKUA010000040.1 Protein Homology CDS 34477 35907 . - 0 ID=cds-WP_159363714.1;Parent=gene-L2557_RS03970;Dbxref=GenBank:WP_159363714.1;Name=WP_159363714.1;gbkey=CDS;gene=phrB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368681.1;locus_tag=L2557_RS03970;product=deoxyribodipyrimidine photo-lyase;protein_id=WP_159363714.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 35918 37420 . - . ID=gene-L2557_RS03975;Name=proP;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=L2557_RS03975 NZ_JAIKUA010000040.1 Protein Homology CDS 35918 37420 . - 0 ID=cds-WP_075672982.1;Parent=gene-L2557_RS03975;Dbxref=GenBank:WP_075672982.1;Name=WP_075672982.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;gene=proP;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004942953.1;locus_tag=L2557_RS03975;product=glycine betaine/L-proline transporter ProP;protein_id=WP_075672982.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 38129 39142 . + . ID=gene-L2557_RS03980;Name=L2557_RS03980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03980 NZ_JAIKUA010000040.1 Protein Homology CDS 38129 39142 . + 0 ID=cds-WP_075672981.1;Parent=gene-L2557_RS03980;Dbxref=GenBank:WP_075672981.1;Name=WP_075672981.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246397.1;locus_tag=L2557_RS03980;product=LysR substrate-binding domain-containing protein;protein_id=WP_075672981.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 39207 40385 . - . ID=gene-L2557_RS03985;Name=L2557_RS03985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03985 NZ_JAIKUA010000040.1 Protein Homology CDS 39207 40385 . - 0 ID=cds-WP_075672980.1;Parent=gene-L2557_RS03985;Dbxref=GenBank:WP_075672980.1;Name=WP_075672980.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534125.1;locus_tag=L2557_RS03985;product=M20 metallopeptidase family protein;protein_id=WP_075672980.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 40385 40834 . - . ID=gene-L2557_RS03990;Name=L2557_RS03990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03990 NZ_JAIKUA010000040.1 Protein Homology CDS 40385 40834 . - 0 ID=cds-WP_075672979.1;Parent=gene-L2557_RS03990;Dbxref=GenBank:WP_075672979.1;Name=WP_075672979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246394.1;locus_tag=L2557_RS03990;product=hypothetical protein;protein_id=WP_075672979.1;transl_table=11 NZ_JAIKUA010000040.1 RefSeq gene 40831 41652 . - . ID=gene-L2557_RS03995;Name=L2557_RS03995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS03995 NZ_JAIKUA010000040.1 Protein Homology CDS 40831 41652 . - 0 ID=cds-WP_023583450.1;Parent=gene-L2557_RS03995;Dbxref=GenBank:WP_023583450.1;Name=WP_023583450.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534123.1;locus_tag=L2557_RS03995;product=DUF3100 domain-containing protein;protein_id=WP_023583450.1;transl_table=11 ##sequence-region NZ_JAIKUA010000400.1 1 871 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000400.1 RefSeq region 1 871 . + . ID=NZ_JAIKUA010000400.1:1..871;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000400.1 RefSeq gene 1 847 . + . ID=gene-L2557_RS17530;Name=L2557_RS17530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17530;partial=true;start_range=.,1 NZ_JAIKUA010000400.1 Protein Homology CDS 1 847 . + 1 ID=cds-WP_235410265.1;Parent=gene-L2557_RS17530;Dbxref=GenBank:WP_235410265.1;Name=WP_235410265.1;Ontology_term=GO:0016757;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;inference=COORDINATES: protein motif:HMM:NF012745.7;locus_tag=L2557_RS17530;partial=true;product=glycosyltransferase family 2 protein;protein_id=WP_235410265.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000401.1 1 511 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000401.1 RefSeq region 1 511 . + . ID=NZ_JAIKUA010000401.1:1..511;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000401.1 RefSeq gene 1 511 . - . ID=gene-L2557_RS17535;Name=L2557_RS17535;end_range=511,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17535;partial=true;start_range=.,1 NZ_JAIKUA010000401.1 GeneMarkS-2+ CDS 1 511 . - 0 ID=cds-WP_235410266.1;Parent=gene-L2557_RS17535;Dbxref=GenBank:WP_235410266.1;Name=WP_235410266.1;end_range=511,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17535;partial=true;product=hypothetical protein;protein_id=WP_235410266.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000402.1 1 1344 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000402.1 RefSeq region 1 1344 . + . ID=NZ_JAIKUA010000402.1:1..1344;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000402.1 RefSeq gene 4 1344 . - . ID=gene-L2557_RS17540;Name=sctE;end_range=1344,.;gbkey=Gene;gene=sctE;gene_biotype=protein_coding;locus_tag=L2557_RS17540;partial=true NZ_JAIKUA010000402.1 Protein Homology CDS 4 1344 . - 0 ID=cds-WP_235410267.1;Parent=gene-L2557_RS17540;Dbxref=GenBank:WP_235410267.1;Name=WP_235410267.1;Ontology_term=GO:0030254;end_range=1344,.;gbkey=CDS;gene=sctE;go_process=protein secretion by the type III secretion system|0030254||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628509.1;locus_tag=L2557_RS17540;partial=true;product=type III secretion system translocon subunit SctE;protein_id=WP_235410267.1;transl_table=11 ##sequence-region NZ_JAIKUA010000403.1 1 220 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000403.1 RefSeq region 1 220 . + . ID=NZ_JAIKUA010000403.1:1..220;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000404.1 1 776 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000404.1 RefSeq region 1 776 . + . ID=NZ_JAIKUA010000404.1:1..776;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000404.1 RefSeq pseudogene 1 751 . + . ID=gene-L2557_RS17545;Name=L2557_RS17545;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17545;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000404.1 GeneMarkS-2+ CDS 1 751 . + 1 ID=cds-L2557_RS17545;Parent=gene-L2557_RS17545;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17545;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000405.1 1 540 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000405.1 RefSeq region 1 540 . + . ID=NZ_JAIKUA010000405.1:1..540;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000406.1 1 461 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000406.1 RefSeq region 1 461 . + . ID=NZ_JAIKUA010000406.1:1..461;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000406.1 RefSeq gene 1 461 . - . ID=gene-L2557_RS17550;Name=L2557_RS17550;end_range=461,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17550;partial=true;start_range=.,1 NZ_JAIKUA010000406.1 GeneMarkS-2+ CDS 1 461 . - 1 ID=cds-WP_235410268.1;Parent=gene-L2557_RS17550;Dbxref=GenBank:WP_235410268.1;Name=WP_235410268.1;end_range=461,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17550;partial=true;product=hypothetical protein;protein_id=WP_235410268.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000407.1 1 342 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000407.1 RefSeq region 1 342 . + . ID=NZ_JAIKUA010000407.1:1..342;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000408.1 1 581 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000408.1 RefSeq region 1 581 . + . ID=NZ_JAIKUA010000408.1:1..581;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000408.1 RefSeq pseudogene 1 581 . + . ID=gene-L2557_RS17555;Name=L2557_RS17555;end_range=581,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17555;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000408.1 GeneMarkS-2+ CDS 1 581 . + 1 ID=cds-L2557_RS17555;Parent=gene-L2557_RS17555;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=581,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17555;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000409.1 1 673 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000409.1 RefSeq region 1 673 . + . ID=NZ_JAIKUA010000409.1:1..673;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000409.1 RefSeq gene 234 673 . + . ID=gene-L2557_RS17560;Name=leuO;end_range=673,.;gbkey=Gene;gene=leuO;gene_biotype=protein_coding;locus_tag=L2557_RS17560;partial=true NZ_JAIKUA010000409.1 Protein Homology CDS 234 673 . + 0 ID=cds-WP_235410269.1;Parent=gene-L2557_RS17560;Dbxref=GenBank:WP_235410269.1;Name=WP_235410269.1;Ontology_term=GO:0006355,GO:0003700;end_range=673,.;gbkey=CDS;gene=leuO;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250338.1;locus_tag=L2557_RS17560;partial=true;product=transcriptional regulator LeuO;protein_id=WP_235410269.1;transl_table=11 ##sequence-region NZ_JAIKUA010000041.1 1 13779 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000041.1 RefSeq region 1 13779 . + . ID=NZ_JAIKUA010000041.1:1..13779;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000041.1 RefSeq gene 293 1930 . + . ID=gene-L2557_RS04000;Name=L2557_RS04000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04000 NZ_JAIKUA010000041.1 Protein Homology CDS 293 1930 . + 0 ID=cds-WP_235409839.1;Parent=gene-L2557_RS04000;Dbxref=GenBank:WP_235409839.1;Name=WP_235409839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249237.1;locus_tag=L2557_RS04000;product=AMP-binding protein;protein_id=WP_235409839.1;transl_table=11 NZ_JAIKUA010000041.1 RefSeq gene 1997 3232 . + . ID=gene-L2557_RS04005;Name=L2557_RS04005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04005 NZ_JAIKUA010000041.1 Protein Homology CDS 1997 3232 . + 0 ID=cds-WP_235409840.1;Parent=gene-L2557_RS04005;Dbxref=GenBank:WP_235409840.1;Name=WP_235409840.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536191.1;locus_tag=L2557_RS04005;product=CaiB/BaiF CoA transferase family protein;protein_id=WP_235409840.1;transl_table=11 NZ_JAIKUA010000041.1 RefSeq gene 3269 4096 . + . ID=gene-L2557_RS04010;Name=L2557_RS04010;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04010 NZ_JAIKUA010000041.1 Protein Homology CDS 3269 4096 . + 0 ID=cds-WP_075673866.1;Parent=gene-L2557_RS04010;Dbxref=GenBank:WP_075673866.1;Name=WP_075673866.1;Ontology_term=GO:0008047;gbkey=CDS;go_function=enzyme activator activity|0008047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249241.1;locus_tag=L2557_RS04010;product=acyl-CoA dehydratase activase;protein_id=WP_075673866.1;transl_table=11 NZ_JAIKUA010000041.1 RefSeq gene 4093 5334 . + . ID=gene-L2557_RS04015;Name=L2557_RS04015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04015 NZ_JAIKUA010000041.1 Protein Homology CDS 4093 5334 . + 0 ID=cds-WP_036934372.1;Parent=gene-L2557_RS04015;Dbxref=GenBank:WP_036934372.1;Name=WP_036934372.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249243.1;locus_tag=L2557_RS04015;product=2-hydroxyacyl-CoA dehydratase subunit D;protein_id=WP_036934372.1;transl_table=11 NZ_JAIKUA010000041.1 RefSeq gene 5334 6467 . + . ID=gene-L2557_RS04020;Name=L2557_RS04020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04020 NZ_JAIKUA010000041.1 Protein Homology CDS 5334 6467 . + 0 ID=cds-WP_075673867.1;Parent=gene-L2557_RS04020;Dbxref=GenBank:WP_075673867.1;Name=WP_075673867.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628518.1;locus_tag=L2557_RS04020;product=2-hydroxyacyl-CoA dehydratase subunit D;protein_id=WP_075673867.1;transl_table=11 NZ_JAIKUA010000041.1 RefSeq gene 6548 7867 . + . ID=gene-L2557_RS04025;Name=L2557_RS04025;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04025 NZ_JAIKUA010000041.1 Protein Homology CDS 6548 7867 . + 0 ID=cds-WP_235409841.1;Parent=gene-L2557_RS04025;Dbxref=GenBank:WP_235409841.1;Name=WP_235409841.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536187.1;locus_tag=L2557_RS04025;product=GntP family permease;protein_id=WP_235409841.1;transl_table=11 NZ_JAIKUA010000041.1 RefSeq gene 7963 9102 . + . ID=gene-L2557_RS04030;Name=L2557_RS04030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04030 NZ_JAIKUA010000041.1 Protein Homology CDS 7963 9102 . + 0 ID=cds-WP_075673868.1;Parent=gene-L2557_RS04030;Dbxref=GenBank:WP_075673868.1;Name=WP_075673868.1;Ontology_term=GO:0016627;gbkey=CDS;go_function=oxidoreductase activity%2C acting on the CH-CH group of donors|0016627||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249246.1;locus_tag=L2557_RS04030;product=acyl-CoA dehydrogenase family protein;protein_id=WP_075673868.1;transl_table=11 NZ_JAIKUA010000041.1 RefSeq gene 9156 9932 . + . ID=gene-L2557_RS04035;Name=fixA;gbkey=Gene;gene=fixA;gene_biotype=protein_coding;locus_tag=L2557_RS04035 NZ_JAIKUA010000041.1 Protein Homology CDS 9156 9932 . + 0 ID=cds-WP_075673869.1;Parent=gene-L2557_RS04035;Dbxref=GenBank:WP_075673869.1;Name=WP_075673869.1;gbkey=CDS;gene=fixA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249247.1;locus_tag=L2557_RS04035;product=putative electron transfer flavoprotein FixA;protein_id=WP_075673869.1;transl_table=11 NZ_JAIKUA010000041.1 RefSeq gene 9944 10885 . + . ID=gene-L2557_RS04040;Name=L2557_RS04040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04040 NZ_JAIKUA010000041.1 Protein Homology CDS 9944 10885 . + 0 ID=cds-WP_075673870.1;Parent=gene-L2557_RS04040;Dbxref=GenBank:WP_075673870.1;Name=WP_075673870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628519.1;locus_tag=L2557_RS04040;product=FAD-binding protein;protein_id=WP_075673870.1;transl_table=11 NZ_JAIKUA010000041.1 RefSeq gene 10949 12235 . + . ID=gene-L2557_RS04045;Name=L2557_RS04045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04045 NZ_JAIKUA010000041.1 Protein Homology CDS 10949 12235 . + 0 ID=cds-WP_099659729.1;Parent=gene-L2557_RS04045;Dbxref=GenBank:WP_099659729.1;Name=WP_099659729.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005120278.1;locus_tag=L2557_RS04045;product=FAD-dependent oxidoreductase;protein_id=WP_099659729.1;transl_table=11 NZ_JAIKUA010000041.1 RefSeq gene 12232 12516 . + . ID=gene-L2557_RS04050;Name=L2557_RS04050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04050 NZ_JAIKUA010000041.1 Protein Homology CDS 12232 12516 . + 0 ID=cds-WP_235409843.1;Parent=gene-L2557_RS04050;Dbxref=GenBank:WP_235409843.1;Name=WP_235409843.1;Ontology_term=GO:0005506,GO:0009055,GO:0051539;gbkey=CDS;go_function=iron ion binding|0005506||IEA,electron transfer activity|0009055||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536179.1;locus_tag=L2557_RS04050;product=ferredoxin family protein;protein_id=WP_235409843.1;transl_table=11 NZ_JAIKUA010000041.1 RefSeq gene 12590 13555 . - . ID=gene-L2557_RS04055;Name=L2557_RS04055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04055 NZ_JAIKUA010000041.1 Protein Homology CDS 12590 13555 . - 0 ID=cds-WP_075673873.1;Parent=gene-L2557_RS04055;Dbxref=GenBank:WP_075673873.1;Name=WP_075673873.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249253.1;locus_tag=L2557_RS04055;product=helix-turn-helix domain-containing protein;protein_id=WP_075673873.1;transl_table=11 ##sequence-region NZ_JAIKUA010000410.1 1 258 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000410.1 RefSeq region 1 258 . + . ID=NZ_JAIKUA010000410.1:1..258;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000410.1 RefSeq gene 1 220 . - . ID=gene-L2557_RS17565;Name=L2557_RS17565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17565;partial=true;start_range=.,1 NZ_JAIKUA010000410.1 Protein Homology CDS 1 220 . - 0 ID=cds-WP_235410270.1;Parent=gene-L2557_RS17565;Dbxref=GenBank:WP_235410270.1;Name=WP_235410270.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF013003.6;locus_tag=L2557_RS17565;partial=true;product=hypothetical protein;protein_id=WP_235410270.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000411.1 1 1087 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000411.1 RefSeq region 1 1087 . + . ID=NZ_JAIKUA010000411.1:1..1087;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000411.1 RefSeq gene 9 335 . - . ID=gene-L2557_RS17570;Name=L2557_RS17570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17570 NZ_JAIKUA010000411.1 Protein Homology CDS 9 335 . - 0 ID=cds-WP_004245856.1;Parent=gene-L2557_RS17570;Dbxref=GenBank:WP_004245856.1;Name=WP_004245856.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245856.1;locus_tag=L2557_RS17570;product=DMT family transporter;protein_id=WP_004245856.1;transl_table=11 NZ_JAIKUA010000411.1 RefSeq gene 418 834 . - . ID=gene-L2557_RS17575;Name=L2557_RS17575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17575 NZ_JAIKUA010000411.1 Protein Homology CDS 418 834 . - 0 ID=cds-WP_075673533.1;Parent=gene-L2557_RS17575;Dbxref=GenBank:WP_075673533.1;Name=WP_075673533.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249190.1;locus_tag=L2557_RS17575;product=DMT family transporter;protein_id=WP_075673533.1;transl_table=11 NZ_JAIKUA010000411.1 RefSeq pseudogene 870 1087 . - . ID=gene-L2557_RS17580;Name=L2557_RS17580;end_range=1087,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17580;partial=true;pseudo=true NZ_JAIKUA010000411.1 Protein Homology CDS 870 1087 . - 2 ID=cds-L2557_RS17580;Parent=gene-L2557_RS17580;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=1087,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628498.1;locus_tag=L2557_RS17580;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAIKUA010000412.1 1 979 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000412.1 RefSeq region 1 979 . + . ID=NZ_JAIKUA010000412.1:1..979;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000412.1 RefSeq gene 126 674 . + . ID=gene-L2557_RS17585;Name=L2557_RS17585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17585 NZ_JAIKUA010000412.1 Protein Homology CDS 126 674 . + 0 ID=cds-WP_235410271.1;Parent=gene-L2557_RS17585;Dbxref=GenBank:WP_235410271.1;Name=WP_235410271.1;Ontology_term=GO:0008752,GO:0008753,GO:0010181,GO:0016491,GO:0050136,GO:0052873;gbkey=CDS;go_function=FMN reductase [NAD(P)H] activity|0008752||IEA,NADPH dehydrogenase (quinone) activity|0008753||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,NADH dehydrogenase (quinone) (non-electrogenic) activity|0050136||IEA,FMN reductase (NADPH) activity|0052873||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244004.1;locus_tag=L2557_RS17585;product=NADPH-dependent FMN reductase;protein_id=WP_235410271.1;transl_table=11 ##sequence-region NZ_JAIKUA010000413.1 1 1010 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000413.1 RefSeq region 1 1010 . + . ID=NZ_JAIKUA010000413.1:1..1010;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000413.1 RefSeq gene 58 966 . - . ID=gene-L2557_RS17590;Name=L2557_RS17590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17590 NZ_JAIKUA010000413.1 Protein Homology CDS 58 966 . - 0 ID=cds-WP_075673626.1;Parent=gene-L2557_RS17590;Dbxref=GenBank:WP_075673626.1;Name=WP_075673626.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661778.1;locus_tag=L2557_RS17590;product=AEC family transporter;protein_id=WP_075673626.1;transl_table=11 ##sequence-region NZ_JAIKUA010000414.1 1 909 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000414.1 RefSeq region 1 909 . + . ID=NZ_JAIKUA010000414.1:1..909;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000414.1 RefSeq gene 1 909 . - . ID=gene-L2557_RS17595;Name=L2557_RS17595;end_range=909,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17595;partial=true;start_range=.,1 NZ_JAIKUA010000414.1 GeneMarkS-2+ CDS 1 909 . - 0 ID=cds-WP_235410272.1;Parent=gene-L2557_RS17595;Dbxref=GenBank:WP_235410272.1;Name=WP_235410272.1;end_range=909,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17595;partial=true;product=hypothetical protein;protein_id=WP_235410272.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000415.1 1 422 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000415.1 RefSeq region 1 422 . + . ID=NZ_JAIKUA010000415.1:1..422;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000415.1 RefSeq gene 1 422 . + . ID=gene-L2557_RS17600;Name=L2557_RS17600;end_range=422,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17600;partial=true;start_range=.,1 NZ_JAIKUA010000415.1 Protein Homology CDS 1 422 . + 0 ID=cds-WP_459559367.1;Parent=gene-L2557_RS17600;Dbxref=GenBank:WP_459559367.1;Name=WP_459559367.1;Ontology_term=GO:0071973,GO:0005198;end_range=422,.;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000079837.1;locus_tag=L2557_RS17600;partial=true;product=flagellin N-terminal helical domain-containing protein;protein_id=WP_459559367.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000416.1 1 551 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000416.1 RefSeq region 1 551 . + . ID=NZ_JAIKUA010000416.1:1..551;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000416.1 RefSeq gene 112 447 . - . ID=gene-L2557_RS17605;Name=L2557_RS17605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17605 NZ_JAIKUA010000416.1 Protein Homology CDS 112 447 . - 0 ID=cds-WP_075670727.1;Parent=gene-L2557_RS17605;Dbxref=GenBank:WP_075670727.1;Name=WP_075670727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248591.1;locus_tag=L2557_RS17605;product=DUF6694 family lipoprotein;protein_id=WP_075670727.1;transl_table=11 ##sequence-region NZ_JAIKUA010000417.1 1 431 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000417.1 RefSeq region 1 431 . + . ID=NZ_JAIKUA010000417.1:1..431;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000417.1 RefSeq pseudogene 1 431 . + . ID=gene-L2557_RS17610;Name=L2557_RS17610;end_range=431,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17610;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000417.1 GeneMarkS-2+ CDS 1 431 . + 1 ID=cds-L2557_RS17610;Parent=gene-L2557_RS17610;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=431,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17610;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000418.1 1 1072 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000418.1 RefSeq region 1 1072 . + . ID=NZ_JAIKUA010000418.1:1..1072;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000418.1 RefSeq pseudogene 1 666 . + . ID=gene-L2557_RS17615;Name=L2557_RS17615;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17615;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000418.1 Protein Homology CDS 1 666 . + 0 ID=cds-L2557_RS17615;Parent=gene-L2557_RS17615;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012763950.1;locus_tag=L2557_RS17615;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAIKUA010000418.1 RefSeq gene 676 1023 . + . ID=gene-L2557_RS17620;Name=L2557_RS17620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17620 NZ_JAIKUA010000418.1 Protein Homology CDS 676 1023 . + 0 ID=cds-WP_098943403.1;Parent=gene-L2557_RS17620;Dbxref=GenBank:WP_098943403.1;Name=WP_098943403.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147859.1;locus_tag=L2557_RS17620;product=immunity 8 family protein;protein_id=WP_098943403.1;transl_table=11 ##sequence-region NZ_JAIKUA010000419.1 1 477 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000419.1 RefSeq region 1 477 . + . ID=NZ_JAIKUA010000419.1:1..477;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000419.1 RefSeq gene 153 228 . - . ID=gene-L2557_RS17625;Name=L2557_RS17625;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS17625 NZ_JAIKUA010000419.1 tRNAscan-SE tRNA 153 228 . - . ID=rna-L2557_RS17625;Parent=gene-L2557_RS17625;anticodon=(pos:complement(193..195));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS17625;product=tRNA-Thr NZ_JAIKUA010000419.1 tRNAscan-SE exon 153 228 . - . ID=exon-L2557_RS17625-1;Parent=rna-L2557_RS17625;anticodon=(pos:complement(193..195));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS17625;product=tRNA-Thr NZ_JAIKUA010000419.1 RefSeq gene 234 308 . - . ID=gene-L2557_RS17630;Name=L2557_RS17630;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS17630 NZ_JAIKUA010000419.1 tRNAscan-SE tRNA 234 308 . - . ID=rna-L2557_RS17630;Parent=gene-L2557_RS17630;anticodon=(pos:complement(273..275));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS17630;product=tRNA-Gly NZ_JAIKUA010000419.1 tRNAscan-SE exon 234 308 . - . ID=exon-L2557_RS17630-1;Parent=rna-L2557_RS17630;anticodon=(pos:complement(273..275));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS17630;product=tRNA-Gly NZ_JAIKUA010000419.1 RefSeq gene 391 475 . - . ID=gene-L2557_RS17635;Name=L2557_RS17635;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS17635 NZ_JAIKUA010000419.1 tRNAscan-SE tRNA 391 475 . - . ID=rna-L2557_RS17635;Parent=gene-L2557_RS17635;anticodon=(pos:complement(439..441));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS17635;product=tRNA-Tyr NZ_JAIKUA010000419.1 tRNAscan-SE exon 391 475 . - . ID=exon-L2557_RS17635-1;Parent=rna-L2557_RS17635;anticodon=(pos:complement(439..441));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS17635;product=tRNA-Tyr ##sequence-region NZ_JAIKUA010000042.1 1 203 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000042.1 RefSeq region 1 203 . + . ID=NZ_JAIKUA010000042.1:1..203;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000420.1 1 277 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000420.1 RefSeq region 1 277 . + . ID=NZ_JAIKUA010000420.1:1..277;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000420.1 RefSeq gene 104 180 . - . ID=gene-L2557_RS17640;Name=L2557_RS17640;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS17640 NZ_JAIKUA010000420.1 tRNAscan-SE tRNA 104 180 . - . ID=rna-L2557_RS17640;Parent=gene-L2557_RS17640;anticodon=(pos:complement(144..146));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS17640;product=tRNA-Pro NZ_JAIKUA010000420.1 tRNAscan-SE exon 104 180 . - . ID=exon-L2557_RS17640-1;Parent=rna-L2557_RS17640;anticodon=(pos:complement(144..146));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS17640;product=tRNA-Pro ##sequence-region NZ_JAIKUA010000421.1 1 553 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000421.1 RefSeq region 1 553 . + . ID=NZ_JAIKUA010000421.1:1..553;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000421.1 RefSeq gene 1 516 . - . ID=gene-L2557_RS17645;Name=L2557_RS17645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17645;partial=true;start_range=.,1 NZ_JAIKUA010000421.1 GeneMarkS-2+ CDS 1 516 . - 0 ID=cds-WP_235410273.1;Parent=gene-L2557_RS17645;Dbxref=GenBank:WP_235410273.1;Name=WP_235410273.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17645;partial=true;product=phenylacetate--CoA ligase family protein;protein_id=WP_235410273.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000422.1 1 537 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000422.1 RefSeq region 1 537 . + . ID=NZ_JAIKUA010000422.1:1..537;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000423.1 1 789 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000423.1 RefSeq region 1 789 . + . ID=NZ_JAIKUA010000423.1:1..789;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000423.1 RefSeq gene 211 687 . + . ID=gene-L2557_RS17650;Name=L2557_RS17650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17650 NZ_JAIKUA010000423.1 Protein Homology CDS 211 687 . + 0 ID=cds-WP_075673435.1;Parent=gene-L2557_RS17650;Dbxref=GenBank:WP_075673435.1;Name=WP_075673435.1;Ontology_term=GO:0005975,GO:0016853;gbkey=CDS;go_function=isomerase activity|0016853||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536167.1;locus_tag=L2557_RS17650;product=RpiB/LacA/LacB family sugar-phosphate isomerase;protein_id=WP_075673435.1;transl_table=11 ##sequence-region NZ_JAIKUA010000424.1 1 846 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000424.1 RefSeq region 1 846 . + . ID=NZ_JAIKUA010000424.1:1..846;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000424.1 RefSeq gene 1 846 . + . ID=gene-L2557_RS17655;Name=L2557_RS17655;end_range=846,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17655;partial=true;start_range=.,1 NZ_JAIKUA010000424.1 Protein Homology CDS 1 846 . + 1 ID=cds-WP_235410274.1;Parent=gene-L2557_RS17655;Dbxref=GenBank:WP_235410274.1;Name=WP_235410274.1;end_range=846,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017412.6;locus_tag=L2557_RS17655;partial=true;product=hypothetical protein;protein_id=WP_235410274.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000425.1 1 573 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000425.1 RefSeq region 1 573 . + . ID=NZ_JAIKUA010000425.1:1..573;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000426.1 1 763 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000426.1 RefSeq region 1 763 . + . ID=NZ_JAIKUA010000426.1:1..763;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000426.1 RefSeq gene 171 719 . + . ID=gene-L2557_RS17660;Name=L2557_RS17660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17660 NZ_JAIKUA010000426.1 Protein Homology CDS 171 719 . + 0 ID=cds-WP_075671136.1;Parent=gene-L2557_RS17660;Dbxref=GenBank:WP_075671136.1;Name=WP_075671136.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: protein motif:HMM:NF012635.6;locus_tag=L2557_RS17660;product=fimbrial protein;protein_id=WP_075671136.1;transl_table=11 ##sequence-region NZ_JAIKUA010000427.1 1 783 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000427.1 RefSeq region 1 783 . + . ID=NZ_JAIKUA010000427.1:1..783;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000427.1 RefSeq gene 37 588 . - . ID=gene-L2557_RS17665;Name=L2557_RS17665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17665 NZ_JAIKUA010000427.1 GeneMarkS-2+ CDS 37 588 . - 0 ID=cds-WP_075674306.1;Parent=gene-L2557_RS17665;Dbxref=GenBank:WP_075674306.1;Name=WP_075674306.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17665;product=fimbrial protein;protein_id=WP_075674306.1;transl_table=11 ##sequence-region NZ_JAIKUA010000428.1 1 340 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000428.1 RefSeq region 1 340 . + . ID=NZ_JAIKUA010000428.1:1..340;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000428.1 RefSeq gene 1 286 . + . ID=gene-L2557_RS17670;Name=L2557_RS17670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17670;partial=true;start_range=.,1 NZ_JAIKUA010000428.1 GeneMarkS-2+ CDS 1 286 . + 1 ID=cds-WP_235410275.1;Parent=gene-L2557_RS17670;Dbxref=GenBank:WP_235410275.1;Name=WP_235410275.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17670;partial=true;product=hypothetical protein;protein_id=WP_235410275.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000429.1 1 544 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000429.1 RefSeq region 1 544 . + . ID=NZ_JAIKUA010000429.1:1..544;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000429.1 RefSeq gene 1 342 . - . ID=gene-L2557_RS17675;Name=L2557_RS17675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17675;partial=true;start_range=.,1 NZ_JAIKUA010000429.1 GeneMarkS-2+ CDS 1 342 . - 0 ID=cds-WP_235410276.1;Parent=gene-L2557_RS17675;Dbxref=GenBank:WP_235410276.1;Name=WP_235410276.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17675;partial=true;product=hypothetical protein;protein_id=WP_235410276.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000043.1 1 6234 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000043.1 RefSeq region 1 6234 . + . ID=NZ_JAIKUA010000043.1:1..6234;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000043.1 RefSeq pseudogene 1 488 . + . ID=gene-L2557_RS04060;Name=L2557_RS04060;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS04060;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000043.1 Protein Homology CDS 1 488 . + 2 ID=cds-L2557_RS04060;Parent=gene-L2557_RS04060;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025345.6;locus_tag=L2557_RS04060;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAIKUA010000043.1 RefSeq gene 594 1490 . - . ID=gene-L2557_RS04065;Name=L2557_RS04065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04065 NZ_JAIKUA010000043.1 Protein Homology CDS 594 1490 . - 0 ID=cds-WP_075673547.1;Parent=gene-L2557_RS04065;Dbxref=GenBank:WP_075673547.1;Name=WP_075673547.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247623.1;locus_tag=L2557_RS04065;product=BPSS1780 family membrane protein;protein_id=WP_075673547.1;transl_table=11 NZ_JAIKUA010000043.1 RefSeq gene 1846 2586 . - . ID=gene-L2557_RS04070;Name=pflA;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=L2557_RS04070 NZ_JAIKUA010000043.1 Protein Homology CDS 1846 2586 . - 0 ID=cds-WP_036938126.1;Parent=gene-L2557_RS04070;Dbxref=GenBank:WP_036938126.1;Name=WP_036938126.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=pflA;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226110.1;locus_tag=L2557_RS04070;product=pyruvate formate lyase 1-activating protein;protein_id=WP_036938126.1;transl_table=11 NZ_JAIKUA010000043.1 RefSeq gene 2695 4977 . - . ID=gene-L2557_RS04075;Name=pflB;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=L2557_RS04075 NZ_JAIKUA010000043.1 Protein Homology CDS 2695 4977 . - 0 ID=cds-WP_075673548.1;Parent=gene-L2557_RS04075;Dbxref=GenBank:WP_075673548.1;Name=WP_075673548.1;Ontology_term=GO:0005975,GO:0008861,GO:0005737;gbkey=CDS;gene=pflB;go_component=cytoplasm|0005737||IEA;go_function=formate C-acetyltransferase activity|0008861||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015834968.1;locus_tag=L2557_RS04075;product=formate C-acetyltransferase;protein_id=WP_075673548.1;transl_table=11 NZ_JAIKUA010000043.1 RefSeq gene 5032 5886 . - . ID=gene-L2557_RS04080;Name=focA;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=L2557_RS04080 NZ_JAIKUA010000043.1 Protein Homology CDS 5032 5886 . - 0 ID=cds-WP_075673549.1;Parent=gene-L2557_RS04080;Dbxref=GenBank:WP_075673549.1;Name=WP_075673549.1;gbkey=CDS;gene=focA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020303849.1;locus_tag=L2557_RS04080;product=formate transporter FocA;protein_id=WP_075673549.1;transl_table=11 ##sequence-region NZ_JAIKUA010000430.1 1 607 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000430.1 RefSeq region 1 607 . + . ID=NZ_JAIKUA010000430.1:1..607;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000430.1 RefSeq gene 185 466 . + . ID=gene-L2557_RS17680;Name=L2557_RS17680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17680 NZ_JAIKUA010000430.1 GeneMarkS-2+ CDS 185 466 . + 0 ID=cds-WP_075672130.1;Parent=gene-L2557_RS17680;Dbxref=GenBank:WP_075672130.1;Name=WP_075672130.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17680;product=hypothetical protein;protein_id=WP_075672130.1;transl_table=11 ##sequence-region NZ_JAIKUA010000431.1 1 203 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000431.1 RefSeq region 1 203 . + . ID=NZ_JAIKUA010000431.1:1..203;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000431.1 RefSeq gene 1 187 . - . ID=gene-L2557_RS17685;Name=L2557_RS17685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17685;partial=true;start_range=.,1 NZ_JAIKUA010000431.1 GeneMarkS-2+ CDS 1 187 . - 0 ID=cds-WP_235410277.1;Parent=gene-L2557_RS17685;Dbxref=GenBank:WP_235410277.1;Name=WP_235410277.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17685;partial=true;product=hypothetical protein;protein_id=WP_235410277.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000432.1 1 576 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000432.1 RefSeq region 1 576 . + . ID=NZ_JAIKUA010000432.1:1..576;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000432.1 RefSeq gene 28 447 . + . ID=gene-L2557_RS17690;Name=L2557_RS17690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17690 NZ_JAIKUA010000432.1 GeneMarkS-2+ CDS 28 447 . + 0 ID=cds-WP_083629079.1;Parent=gene-L2557_RS17690;Dbxref=GenBank:WP_083629079.1;Name=WP_083629079.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17690;product=hypothetical protein;protein_id=WP_083629079.1;transl_table=11 ##sequence-region NZ_JAIKUA010000433.1 1 843 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000433.1 RefSeq region 1 843 . + . ID=NZ_JAIKUA010000433.1:1..843;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000434.1 1 1412 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000434.1 RefSeq region 1 1412 . + . ID=NZ_JAIKUA010000434.1:1..1412;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000434.1 RefSeq pseudogene 1 1398 . - . ID=gene-L2557_RS17695;Name=L2557_RS17695;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17695;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000434.1 GeneMarkS-2+ CDS 1 1398 . - 0 ID=cds-L2557_RS17695;Parent=gene-L2557_RS17695;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17695;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000435.1 1 248 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000435.1 RefSeq region 1 248 . + . ID=NZ_JAIKUA010000435.1:1..248;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000435.1 RefSeq pseudogene 1 227 . - . ID=gene-L2557_RS17700;Name=L2557_RS17700;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17700;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000435.1 GeneMarkS-2+ CDS 1 227 . - 0 ID=cds-L2557_RS17700;Parent=gene-L2557_RS17700;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17700;partial=true;product=type III effector;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000436.1 1 785 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000436.1 RefSeq region 1 785 . + . ID=NZ_JAIKUA010000436.1:1..785;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000437.1 1 913 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000437.1 RefSeq region 1 913 . + . ID=NZ_JAIKUA010000437.1:1..913;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000437.1 RefSeq gene 1 900 . + . ID=gene-L2557_RS17705;Name=L2557_RS17705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17705;partial=true;start_range=.,1 NZ_JAIKUA010000437.1 GeneMarkS-2+ CDS 1 900 . + 0 ID=cds-WP_235410278.1;Parent=gene-L2557_RS17705;Dbxref=GenBank:WP_235410278.1;Name=WP_235410278.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17705;partial=true;product=hypothetical protein;protein_id=WP_235410278.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000438.1 1 815 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000438.1 RefSeq region 1 815 . + . ID=NZ_JAIKUA010000438.1:1..815;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000438.1 RefSeq gene 1 768 . - . ID=gene-L2557_RS17710;Name=L2557_RS17710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17710;partial=true;start_range=.,1 NZ_JAIKUA010000438.1 GeneMarkS-2+ CDS 1 768 . - 0 ID=cds-WP_235410279.1;Parent=gene-L2557_RS17710;Dbxref=GenBank:WP_235410279.1;Name=WP_235410279.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17710;partial=true;product=MATE family efflux transporter;protein_id=WP_235410279.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000439.1 1 638 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000439.1 RefSeq region 1 638 . + . ID=NZ_JAIKUA010000439.1:1..638;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000439.1 RefSeq gene 366 638 . + . ID=gene-L2557_RS17715;Name=L2557_RS17715;end_range=638,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17715;partial=true NZ_JAIKUA010000439.1 Protein Homology CDS 366 638 . + 0 ID=cds-WP_235410280.1;Parent=gene-L2557_RS17715;Dbxref=GenBank:WP_235410280.1;Name=WP_235410280.1;Ontology_term=GO:0003677;end_range=638,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533898.1;locus_tag=L2557_RS17715;partial=true;product=helix-turn-helix domain-containing protein;protein_id=WP_235410280.1;transl_table=11 ##sequence-region NZ_JAIKUA010000044.1 1 23822 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000044.1 RefSeq region 1 23822 . + . ID=NZ_JAIKUA010000044.1:1..23822;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000044.1 RefSeq gene 389 2761 . - . ID=gene-L2557_RS04085;Name=ppsA;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=L2557_RS04085 NZ_JAIKUA010000044.1 Protein Homology CDS 389 2761 . - 0 ID=cds-WP_075673216.1;Parent=gene-L2557_RS04085;Dbxref=GenBank:WP_075673216.1;Name=WP_075673216.1;Ontology_term=GO:0006090,GO:0016310,GO:0005524,GO:0008986,GO:0016772;gbkey=CDS;gene=ppsA;go_function=ATP binding|0005524||IEA,pyruvate%2C water dikinase activity|0008986||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=pyruvate metabolic process|0006090||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243172.1;locus_tag=L2557_RS04085;product=phosphoenolpyruvate synthase;protein_id=WP_075673216.1;transl_table=11 NZ_JAIKUA010000044.1 RefSeq gene 2983 3849 . + . ID=gene-L2557_RS04090;Name=ppsR;gbkey=Gene;gene=ppsR;gene_biotype=protein_coding;locus_tag=L2557_RS04090 NZ_JAIKUA010000044.1 Protein Homology CDS 2983 3849 . + 0 ID=cds-WP_075673215.1;Parent=gene-L2557_RS04090;Dbxref=GenBank:WP_075673215.1;Name=WP_075673215.1;Ontology_term=GO:0004674,GO:0005524,GO:0016776,GO:0043531;gbkey=CDS;gene=ppsR;go_function=protein serine/threonine kinase activity|0004674||IEA,ATP binding|0005524||IEA,phosphotransferase activity%2C phosphate group as acceptor|0016776||IEA,ADP binding|0043531||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243173.1;locus_tag=L2557_RS04090;product=posphoenolpyruvate synthetase regulatory kinase/phosphorylase PpsR;protein_id=WP_075673215.1;transl_table=11 NZ_JAIKUA010000044.1 RefSeq gene 3971 5017 . + . ID=gene-L2557_RS04095;Name=L2557_RS04095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04095 NZ_JAIKUA010000044.1 Protein Homology CDS 3971 5017 . + 0 ID=cds-WP_075673214.1;Parent=gene-L2557_RS04095;Dbxref=GenBank:WP_075673214.1;Name=WP_075673214.1;Ontology_term=GO:0009073,GO:0016832;gbkey=CDS;go_function=aldehyde-lyase activity|0016832||IEA;go_process=aromatic amino acid family biosynthetic process|0009073||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004931381.1;locus_tag=L2557_RS04095;product=3-deoxy-7-phosphoheptulonate synthase;protein_id=WP_075673214.1;transl_table=11 NZ_JAIKUA010000044.1 RefSeq gene 5278 5460 . + . ID=gene-L2557_RS04100;Name=hemP;gbkey=Gene;gene=hemP;gene_biotype=protein_coding;locus_tag=L2557_RS04100 NZ_JAIKUA010000044.1 Protein Homology CDS 5278 5460 . + 0 ID=cds-WP_075673213.1;Parent=gene-L2557_RS04100;Dbxref=GenBank:WP_075673213.1;Name=WP_075673213.1;gbkey=CDS;gene=hemP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005187312.1;locus_tag=L2557_RS04100;product=hemin uptake protein HemP;protein_id=WP_075673213.1;transl_table=11 NZ_JAIKUA010000044.1 RefSeq gene 5542 7728 . + . ID=gene-L2557_RS04105;Name=L2557_RS04105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04105 NZ_JAIKUA010000044.1 Protein Homology CDS 5542 7728 . + 0 ID=cds-WP_156733373.1;Parent=gene-L2557_RS04105;Dbxref=GenBank:WP_156733373.1;Name=WP_156733373.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248180.1;locus_tag=L2557_RS04105;product=TonB-dependent receptor domain-containing protein;protein_id=WP_156733373.1;transl_table=11 NZ_JAIKUA010000044.1 RefSeq gene 7797 9824 . + . ID=gene-L2557_RS04110;Name=L2557_RS04110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04110 NZ_JAIKUA010000044.1 Protein Homology CDS 7797 9824 . + 0 ID=cds-WP_099659667.1;Parent=gene-L2557_RS04110;Dbxref=GenBank:WP_099659667.1;Name=WP_099659667.1;Ontology_term=GO:0055085,GO:0022857,GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011146854.1;locus_tag=L2557_RS04110;product=TonB-dependent hemoglobin/transferrin/lactoferrin family receptor;protein_id=WP_099659667.1;transl_table=11 NZ_JAIKUA010000044.1 RefSeq gene 9864 10913 . + . ID=gene-L2557_RS04115;Name=L2557_RS04115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04115 NZ_JAIKUA010000044.1 Protein Homology CDS 9864 10913 . + 0 ID=cds-WP_109418935.1;Parent=gene-L2557_RS04115;Dbxref=GenBank:WP_109418935.1;Name=WP_109418935.1;Ontology_term=GO:0006826;gbkey=CDS;go_process=iron ion transport|0006826||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248182.1;locus_tag=L2557_RS04115;product=hemin-degrading factor;protein_id=WP_109418935.1;transl_table=11 NZ_JAIKUA010000044.1 RefSeq gene 10929 11744 . + . ID=gene-L2557_RS04120;Name=L2557_RS04120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04120 NZ_JAIKUA010000044.1 Protein Homology CDS 10929 11744 . + 0 ID=cds-WP_075673209.1;Parent=gene-L2557_RS04120;Dbxref=GenBank:WP_075673209.1;Name=WP_075673209.1;Ontology_term=GO:0042626,GO:0140359,GO:0055052;gbkey=CDS;go_component=ATP-binding cassette (ABC) transporter complex%2C substrate-binding subunit-containing|0055052||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243179.1;locus_tag=L2557_RS04120;product=heme/hemin ABC transporter substrate-binding protein;protein_id=WP_075673209.1;transl_table=11 NZ_JAIKUA010000044.1 RefSeq gene 11744 12748 . + . ID=gene-L2557_RS04125;Name=L2557_RS04125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04125 NZ_JAIKUA010000044.1 Protein Homology CDS 11744 12748 . + 0 ID=cds-WP_075673208.1;Parent=gene-L2557_RS04125;Dbxref=GenBank:WP_075673208.1;Name=WP_075673208.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537086.1;locus_tag=L2557_RS04125;product=FecCD family ABC transporter permease;protein_id=WP_075673208.1;transl_table=11 NZ_JAIKUA010000044.1 RefSeq gene 12745 13539 . + . ID=gene-L2557_RS04130;Name=L2557_RS04130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04130 NZ_JAIKUA010000044.1 Protein Homology CDS 12745 13539 . + 0 ID=cds-WP_075673207.1;Parent=gene-L2557_RS04130;Dbxref=GenBank:WP_075673207.1;Name=WP_075673207.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243181.1;locus_tag=L2557_RS04130;product=heme ABC transporter ATP-binding protein;protein_id=WP_075673207.1;transl_table=11 NZ_JAIKUA010000044.1 RefSeq gene 14064 14432 . + . ID=gene-L2557_RS04135;Name=L2557_RS04135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04135 NZ_JAIKUA010000044.1 Protein Homology CDS 14064 14432 . + 0 ID=cds-WP_069369334.1;Parent=gene-L2557_RS04135;Dbxref=GenBank:WP_069369334.1;Name=WP_069369334.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004235398.1;locus_tag=L2557_RS04135;product=helix-turn-helix domain-containing protein;protein_id=WP_069369334.1;transl_table=11 NZ_JAIKUA010000044.1 RefSeq gene 14520 15539 . - . ID=gene-L2557_RS04140;Name=L2557_RS04140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04140 NZ_JAIKUA010000044.1 Protein Homology CDS 14520 15539 . - 0 ID=cds-WP_075673206.1;Parent=gene-L2557_RS04140;Dbxref=GenBank:WP_075673206.1;Name=WP_075673206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251432.1;locus_tag=L2557_RS04140;product=lipoate--protein ligase A;protein_id=WP_075673206.1;transl_table=11 NZ_JAIKUA010000044.1 RefSeq gene 15617 16108 . - . ID=gene-L2557_RS04145;Name=L2557_RS04145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04145 NZ_JAIKUA010000044.1 Protein Homology CDS 15617 16108 . - 0 ID=cds-WP_036937364.1;Parent=gene-L2557_RS04145;Dbxref=GenBank:WP_036937364.1;Name=WP_036937364.1;Ontology_term=GO:0000270,GO:0006508,GO:0008233,GO:0008234,GO:0016787;gbkey=CDS;go_function=peptidase activity|0008233||IEA,cysteine-type peptidase activity|0008234||IEA,hydrolase activity|0016787||IEA;go_process=peptidoglycan metabolic process|0000270||IEA,proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016927954.1;locus_tag=L2557_RS04145;product=C40 family peptidase;protein_id=WP_036937364.1;transl_table=11 NZ_JAIKUA010000044.1 RefSeq gene 16258 16656 . - . ID=gene-L2557_RS04150;Name=arnF;gbkey=Gene;gene=arnF;gene_biotype=protein_coding;locus_tag=L2557_RS04150 NZ_JAIKUA010000044.1 Protein Homology CDS 16258 16656 . - 0 ID=cds-WP_099659664.1;Parent=gene-L2557_RS04150;Dbxref=GenBank:WP_099659664.1;Name=WP_099659664.1;gbkey=CDS;gene=arnF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537094.1;locus_tag=L2557_RS04150;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF;protein_id=WP_099659664.1;transl_table=11 NZ_JAIKUA010000044.1 RefSeq gene 16653 16994 . - . ID=gene-L2557_RS04155;Name=arnE;gbkey=Gene;gene=arnE;gene_biotype=protein_coding;locus_tag=L2557_RS04155 NZ_JAIKUA010000044.1 Protein Homology CDS 16653 16994 . - 0 ID=cds-WP_075673204.1;Parent=gene-L2557_RS04155;Dbxref=GenBank:WP_075673204.1;Name=WP_075673204.1;gbkey=CDS;gene=arnE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247948.1;locus_tag=L2557_RS04155;product=4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE;protein_id=WP_075673204.1;transl_table=11 NZ_JAIKUA010000044.1 RefSeq gene 16994 18658 . - . ID=gene-L2557_RS04160;Name=arnT;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=L2557_RS04160 NZ_JAIKUA010000044.1 Protein Homology CDS 16994 18658 . - 0 ID=cds-WP_075673203.1;Parent=gene-L2557_RS04160;Dbxref=GenBank:WP_075673203.1;Name=WP_075673203.1;Ontology_term=GO:0006493,GO:0000030,GO:0016763,GO:0016020;gbkey=CDS;gene=arnT;go_component=membrane|0016020||IEA;go_function=mannosyltransferase activity|0000030||IEA,pentosyltransferase activity|0016763||IEA;go_process=protein O-linked glycosylation|0006493||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242623.1;locus_tag=L2557_RS04160;product=lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase;protein_id=WP_075673203.1;transl_table=11 NZ_JAIKUA010000044.1 RefSeq gene 18666 19559 . - . ID=gene-L2557_RS04165;Name=arnD;gbkey=Gene;gene=arnD;gene_biotype=protein_coding;locus_tag=L2557_RS04165 NZ_JAIKUA010000044.1 Protein Homology CDS 18666 19559 . - 0 ID=cds-WP_109418938.1;Parent=gene-L2557_RS04165;Dbxref=GenBank:WP_109418938.1;Name=WP_109418938.1;Ontology_term=GO:0016810;gbkey=CDS;gene=arnD;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242622.1;locus_tag=L2557_RS04165;product=4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase;protein_id=WP_109418938.1;transl_table=11 NZ_JAIKUA010000044.1 RefSeq gene 19569 21551 . - . ID=gene-L2557_RS04170;Name=arnA;gbkey=Gene;gene=arnA;gene_biotype=protein_coding;locus_tag=L2557_RS04170 NZ_JAIKUA010000044.1 Protein Homology CDS 19569 21551 . - 0 ID=cds-WP_235409844.1;Parent=gene-L2557_RS04170;Dbxref=GenBank:WP_235409844.1;Name=WP_235409844.1;Ontology_term=GO:0009058,GO:0016742;gbkey=CDS;gene=arnA;go_function=hydroxymethyl-%2C formyl- and related transferase activity|0016742||IEA;go_process=biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251444.1;locus_tag=L2557_RS04170;product=bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA;protein_id=WP_235409844.1;transl_table=11 NZ_JAIKUA010000044.1 RefSeq gene 21551 22531 . - . ID=gene-L2557_RS04175;Name=arnC;gbkey=Gene;gene=arnC;gene_biotype=protein_coding;locus_tag=L2557_RS04175 NZ_JAIKUA010000044.1 Protein Homology CDS 21551 22531 . - 0 ID=cds-WP_075673352.1;Parent=gene-L2557_RS04175;Dbxref=GenBank:WP_075673352.1;Name=WP_075673352.1;Ontology_term=GO:0016780;gbkey=CDS;gene=arnC;go_function=phosphotransferase activity%2C for other substituted phosphate groups|0016780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242618.1;locus_tag=L2557_RS04175;product=undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase;protein_id=WP_075673352.1;transl_table=11 NZ_JAIKUA010000044.1 RefSeq gene 22532 23677 . - . ID=gene-L2557_RS04180;Name=arnB;gbkey=Gene;gene=arnB;gene_biotype=protein_coding;locus_tag=L2557_RS04180 NZ_JAIKUA010000044.1 Protein Homology CDS 22532 23677 . - 0 ID=cds-WP_099659662.1;Parent=gene-L2557_RS04180;Dbxref=GenBank:WP_099659662.1;Name=WP_099659662.1;Ontology_term=GO:0008483;gbkey=CDS;gene=arnB;go_function=transaminase activity|0008483||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247945.1;locus_tag=L2557_RS04180;product=UDP-4-amino-4-deoxy-L-arabinose aminotransferase;protein_id=WP_099659662.1;transl_table=11 ##sequence-region NZ_JAIKUA010000440.1 1 617 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000440.1 RefSeq region 1 617 . + . ID=NZ_JAIKUA010000440.1:1..617;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000440.1 RefSeq gene 1 617 . - . ID=gene-L2557_RS17720;Name=L2557_RS17720;end_range=617,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17720;partial=true;start_range=.,1 NZ_JAIKUA010000440.1 GeneMarkS-2+ CDS 1 617 . - 0 ID=cds-WP_235410281.1;Parent=gene-L2557_RS17720;Dbxref=GenBank:WP_235410281.1;Name=WP_235410281.1;end_range=617,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17720;partial=true;product=hypothetical protein;protein_id=WP_235410281.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000441.1 1 677 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000441.1 RefSeq region 1 677 . + . ID=NZ_JAIKUA010000441.1:1..677;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000441.1 RefSeq gene 90 641 . + . ID=gene-L2557_RS17725;Name=L2557_RS17725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17725 NZ_JAIKUA010000441.1 Protein Homology CDS 90 641 . + 0 ID=cds-WP_075671153.1;Parent=gene-L2557_RS17725;Dbxref=GenBank:WP_075671153.1;Name=WP_075671153.1;Ontology_term=GO:0044384;gbkey=CDS;go_component=host outer membrane|0044384||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246725.1;locus_tag=L2557_RS17725;product=Ail/Lom family outer membrane beta-barrel protein;protein_id=WP_075671153.1;transl_table=11 ##sequence-region NZ_JAIKUA010000442.1 1 1220 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000442.1 RefSeq region 1 1220 . + . ID=NZ_JAIKUA010000442.1:1..1220;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000442.1 RefSeq gene 264 599 . + . ID=gene-L2557_RS17730;Name=L2557_RS17730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17730 NZ_JAIKUA010000442.1 Protein Homology CDS 264 599 . + 0 ID=cds-WP_075673430.1;Parent=gene-L2557_RS17730;Dbxref=GenBank:WP_075673430.1;Name=WP_075673430.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016535510.1;locus_tag=L2557_RS17730;product=type II toxin-antitoxin system PrlF family antitoxin;protein_id=WP_075673430.1;transl_table=11 NZ_JAIKUA010000442.1 RefSeq gene 606 1079 . + . ID=gene-L2557_RS17735;Name=L2557_RS17735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17735 NZ_JAIKUA010000442.1 Protein Homology CDS 606 1079 . + 0 ID=cds-WP_075673429.1;Parent=gene-L2557_RS17735;Dbxref=GenBank:WP_075673429.1;Name=WP_075673429.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000347274.1;locus_tag=L2557_RS17735;product=type II toxin-antitoxin system YhaV family toxin;protein_id=WP_075673429.1;transl_table=11 ##sequence-region NZ_JAIKUA010000443.1 1 1403 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000443.1 RefSeq region 1 1403 . + . ID=NZ_JAIKUA010000443.1:1..1403;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000443.1 RefSeq pseudogene 1 476 . - . ID=gene-L2557_RS17740;Name=L2557_RS17740;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17740;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000443.1 GeneMarkS-2+ CDS 1 476 . - 0 ID=cds-L2557_RS17740;Parent=gene-L2557_RS17740;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17740;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAIKUA010000443.1 RefSeq gene 528 1403 . - . ID=gene-L2557_RS17745;Name=L2557_RS17745;end_range=1403,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17745;partial=true NZ_JAIKUA010000443.1 GeneMarkS-2+ CDS 528 1403 . - 0 ID=cds-WP_235410283.1;Parent=gene-L2557_RS17745;Dbxref=GenBank:WP_235410283.1;Name=WP_235410283.1;end_range=1403,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17745;partial=true;product=hypothetical protein;protein_id=WP_235410283.1;transl_table=11 ##sequence-region NZ_JAIKUA010000444.1 1 228 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000444.1 RefSeq region 1 228 . + . ID=NZ_JAIKUA010000444.1:1..228;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000445.1 1 624 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000445.1 RefSeq region 1 624 . + . ID=NZ_JAIKUA010000445.1:1..624;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000445.1 RefSeq pseudogene 31 624 . + . ID=gene-L2557_RS17750;Name=L2557_RS17750;end_range=624,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17750;partial=true;pseudo=true NZ_JAIKUA010000445.1 GeneMarkS-2+ CDS 31 624 . + 0 ID=cds-L2557_RS17750;Parent=gene-L2557_RS17750;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=624,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17750;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAIKUA010000446.1 1 343 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000446.1 RefSeq region 1 343 . + . ID=NZ_JAIKUA010000446.1:1..343;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000446.1 RefSeq gene 1 343 . + . ID=gene-L2557_RS17755;Name=L2557_RS17755;end_range=343,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17755;partial=true;start_range=.,1 NZ_JAIKUA010000446.1 GeneMarkS-2+ CDS 1 343 . + 1 ID=cds-WP_235410284.1;Parent=gene-L2557_RS17755;Dbxref=GenBank:WP_235410284.1;Name=WP_235410284.1;end_range=343,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17755;partial=true;product=hypothetical protein;protein_id=WP_235410284.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000447.1 1 315 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000447.1 RefSeq region 1 315 . + . ID=NZ_JAIKUA010000447.1:1..315;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000448.1 1 304 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000448.1 RefSeq region 1 304 . + . ID=NZ_JAIKUA010000448.1:1..304;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000449.1 1 737 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000449.1 RefSeq region 1 737 . + . ID=NZ_JAIKUA010000449.1:1..737;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000449.1 RefSeq gene 1 364 . + . ID=gene-L2557_RS17760;Name=L2557_RS17760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17760;partial=true;start_range=.,1 NZ_JAIKUA010000449.1 GeneMarkS-2+ CDS 1 364 . + 1 ID=cds-WP_235410285.1;Parent=gene-L2557_RS17760;Dbxref=GenBank:WP_235410285.1;Name=WP_235410285.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17760;partial=true;product=hypothetical protein;protein_id=WP_235410285.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000045.1 1 1028 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000045.1 RefSeq region 1 1028 . + . ID=NZ_JAIKUA010000045.1:1..1028;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000045.1 RefSeq gene 641 943 . + . ID=gene-L2557_RS04185;Name=L2557_RS04185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04185 NZ_JAIKUA010000045.1 Protein Homology CDS 641 943 . + 0 ID=cds-WP_075670534.1;Parent=gene-L2557_RS04185;Dbxref=GenBank:WP_075670534.1;Name=WP_075670534.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243781.1;locus_tag=L2557_RS04185;product=helix-turn-helix domain-containing protein;protein_id=WP_075670534.1;transl_table=11 ##sequence-region NZ_JAIKUA010000450.1 1 227 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000450.1 RefSeq region 1 227 . + . ID=NZ_JAIKUA010000450.1:1..227;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000450.1 RefSeq gene 1 227 . - . ID=gene-L2557_RS17765;Name=L2557_RS17765;end_range=227,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17765;partial=true;start_range=.,1 NZ_JAIKUA010000450.1 GeneMarkS-2+ CDS 1 227 . - 0 ID=cds-WP_235410286.1;Parent=gene-L2557_RS17765;Dbxref=GenBank:WP_235410286.1;Name=WP_235410286.1;end_range=227,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17765;partial=true;product=hypothetical protein;protein_id=WP_235410286.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000451.1 1 870 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000451.1 RefSeq region 1 870 . + . ID=NZ_JAIKUA010000451.1:1..870;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000451.1 RefSeq gene 1 870 . - . ID=gene-L2557_RS17770;Name=L2557_RS17770;end_range=870,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17770;partial=true;start_range=.,1 NZ_JAIKUA010000451.1 GeneMarkS-2+ CDS 1 870 . - 2 ID=cds-WP_235410287.1;Parent=gene-L2557_RS17770;Dbxref=GenBank:WP_235410287.1;Name=WP_235410287.1;end_range=870,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17770;partial=true;product=hypothetical protein;protein_id=WP_235410287.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000452.1 1 334 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000452.1 RefSeq region 1 334 . + . ID=NZ_JAIKUA010000452.1:1..334;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000453.1 1 512 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000453.1 RefSeq region 1 512 . + . ID=NZ_JAIKUA010000453.1:1..512;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000454.1 1 1866 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000454.1 RefSeq region 1 1866 . + . ID=NZ_JAIKUA010000454.1:1..1866;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000454.1 RefSeq pseudogene 1 558 . + . ID=gene-L2557_RS17775;Name=L2557_RS17775;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17775;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000454.1 Protein Homology CDS 1 558 . + 0 ID=cds-L2557_RS17775;Parent=gene-L2557_RS17775;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000542997.1;locus_tag=L2557_RS17775;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 NZ_JAIKUA010000454.1 RefSeq gene 536 1087 . + . ID=gene-L2557_RS17780;Name=L2557_RS17780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17780 NZ_JAIKUA010000454.1 Protein Homology CDS 536 1087 . + 0 ID=cds-WP_235410288.1;Parent=gene-L2557_RS17780;Dbxref=GenBank:WP_235410288.1;Name=WP_235410288.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001043245.1;locus_tag=L2557_RS17780;product=hypothetical protein;protein_id=WP_235410288.1;transl_table=11 NZ_JAIKUA010000454.1 RefSeq gene 1434 1866 . - . ID=gene-L2557_RS17785;Name=L2557_RS17785;end_range=1866,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17785;partial=true NZ_JAIKUA010000454.1 GeneMarkS-2+ CDS 1434 1866 . - 1 ID=cds-WP_235410289.1;Parent=gene-L2557_RS17785;Dbxref=GenBank:WP_235410289.1;Name=WP_235410289.1;end_range=1866,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17785;partial=true;product=hypothetical protein;protein_id=WP_235410289.1;transl_table=11 ##sequence-region NZ_JAIKUA010000455.1 1 1123 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000455.1 RefSeq region 1 1123 . + . ID=NZ_JAIKUA010000455.1:1..1123;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000455.1 RefSeq gene 1 1123 . + . ID=gene-L2557_RS17790;Name=L2557_RS17790;end_range=1123,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17790;partial=true;start_range=.,1 NZ_JAIKUA010000455.1 Protein Homology CDS 1 1123 . + 2 ID=cds-WP_235410290.1;Parent=gene-L2557_RS17790;Dbxref=GenBank:WP_235410290.1;Name=WP_235410290.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;end_range=1123,.;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: protein motif:HMM:NF012786.6;locus_tag=L2557_RS17790;partial=true;product=fimbria/pilus outer membrane usher protein;protein_id=WP_235410290.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000456.1 1 578 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000456.1 RefSeq region 1 578 . + . ID=NZ_JAIKUA010000456.1:1..578;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000456.1 RefSeq gene 1 578 . + . ID=gene-L2557_RS17795;Name=L2557_RS17795;end_range=578,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17795;partial=true;start_range=.,1 NZ_JAIKUA010000456.1 GeneMarkS-2+ CDS 1 578 . + 2 ID=cds-WP_235410291.1;Parent=gene-L2557_RS17795;Dbxref=GenBank:WP_235410291.1;Name=WP_235410291.1;end_range=578,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17795;partial=true;product=hypothetical protein;protein_id=WP_235410291.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000457.1 1 707 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000457.1 RefSeq region 1 707 . + . ID=NZ_JAIKUA010000457.1:1..707;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000457.1 RefSeq gene 201 707 . + . ID=gene-L2557_RS17800;Name=L2557_RS17800;end_range=707,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17800;partial=true NZ_JAIKUA010000457.1 GeneMarkS-2+ CDS 201 707 . + 0 ID=cds-WP_235410292.1;Parent=gene-L2557_RS17800;Dbxref=GenBank:WP_235410292.1;Name=WP_235410292.1;end_range=707,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17800;partial=true;product=hypothetical protein;protein_id=WP_235410292.1;transl_table=11 ##sequence-region NZ_JAIKUA010000458.1 1 761 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000458.1 RefSeq region 1 761 . + . ID=NZ_JAIKUA010000458.1:1..761;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000458.1 RefSeq gene 204 734 . + . ID=gene-L2557_RS17805;Name=L2557_RS17805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17805 NZ_JAIKUA010000458.1 Protein Homology CDS 204 734 . + 0 ID=cds-WP_099660607.1;Parent=gene-L2557_RS17805;Dbxref=GenBank:WP_099660607.1;Name=WP_099660607.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533117.1;locus_tag=L2557_RS17805;product=fimbrial protein;protein_id=WP_099660607.1;transl_table=11 ##sequence-region NZ_JAIKUA010000459.1 1 534 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000459.1 RefSeq region 1 534 . + . ID=NZ_JAIKUA010000459.1:1..534;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000459.1 RefSeq gene 123 434 . - . ID=gene-L2557_RS17810;Name=L2557_RS17810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17810 NZ_JAIKUA010000459.1 Protein Homology CDS 123 434 . - 0 ID=cds-WP_109419858.1;Parent=gene-L2557_RS17810;Dbxref=GenBank:WP_109419858.1;Name=WP_109419858.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247052.1;locus_tag=L2557_RS17810;product=hypothetical protein;protein_id=WP_109419858.1;transl_table=11 ##sequence-region NZ_JAIKUA010000046.1 1 5645 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000046.1 RefSeq region 1 5645 . + . ID=NZ_JAIKUA010000046.1:1..5645;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000046.1 RefSeq gene 859 1176 . + . ID=gene-L2557_RS04190;Name=L2557_RS04190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04190 NZ_JAIKUA010000046.1 Protein Homology CDS 859 1176 . + 0 ID=cds-WP_075674235.1;Parent=gene-L2557_RS04190;Dbxref=GenBank:WP_075674235.1;Name=WP_075674235.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368704.1;locus_tag=L2557_RS04190;product=hypothetical protein;protein_id=WP_075674235.1;transl_table=11 NZ_JAIKUA010000046.1 RefSeq gene 1259 2479 . - . ID=gene-L2557_RS04195;Name=hemY;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=L2557_RS04195 NZ_JAIKUA010000046.1 Protein Homology CDS 1259 2479 . - 0 ID=cds-WP_075674236.1;Parent=gene-L2557_RS04195;Dbxref=GenBank:WP_075674236.1;Name=WP_075674236.1;Ontology_term=GO:0042168,GO:0005515,GO:0016020;gbkey=CDS;gene=hemY;go_component=membrane|0016020||IEA;go_function=protein binding|0005515||IEA;go_process=heme metabolic process|0042168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246334.1;locus_tag=L2557_RS04195;product=protoheme IX biogenesis protein HemY;protein_id=WP_075674236.1;transl_table=11 NZ_JAIKUA010000046.1 RefSeq gene 2484 3752 . - . ID=gene-L2557_RS04200;Name=hemX;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=L2557_RS04200 NZ_JAIKUA010000046.1 Protein Homology CDS 2484 3752 . - 0 ID=cds-WP_099660294.1;Parent=gene-L2557_RS04200;Dbxref=GenBank:WP_099660294.1;Name=WP_099660294.1;gbkey=CDS;gene=hemX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249662.1;locus_tag=L2557_RS04200;product=uroporphyrinogen-III C-methyltransferase;protein_id=WP_099660294.1;transl_table=11 NZ_JAIKUA010000046.1 RefSeq gene 3773 4510 . - . ID=gene-L2557_RS04205;Name=hemD;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=L2557_RS04205 NZ_JAIKUA010000046.1 Protein Homology CDS 3773 4510 . - 0 ID=cds-WP_099660293.1;Parent=gene-L2557_RS04205;Dbxref=GenBank:WP_099660293.1;Name=WP_099660293.1;Ontology_term=GO:0006780,GO:0004852;gbkey=CDS;gene=hemD;go_function=uroporphyrinogen-III synthase activity|0004852||IEA;go_process=uroporphyrinogen III biosynthetic process|0006780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246332.1;locus_tag=L2557_RS04205;product=uroporphyrinogen-III synthase;protein_id=WP_099660293.1;transl_table=11 NZ_JAIKUA010000046.1 RefSeq gene 4507 5448 . - . ID=gene-L2557_RS04210;Name=hemC;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=L2557_RS04210 NZ_JAIKUA010000046.1 Protein Homology CDS 4507 5448 . - 0 ID=cds-WP_099660292.1;Parent=gene-L2557_RS04210;Dbxref=GenBank:WP_099660292.1;Name=WP_099660292.1;Ontology_term=GO:0033014,GO:0004418;gbkey=CDS;gene=hemC;go_function=hydroxymethylbilane synthase activity|0004418||IEA;go_process=tetrapyrrole biosynthetic process|0033014||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845304.1;locus_tag=L2557_RS04210;product=hydroxymethylbilane synthase;protein_id=WP_099660292.1;transl_table=11 ##sequence-region NZ_JAIKUA010000460.1 1 320 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000460.1 RefSeq region 1 320 . + . ID=NZ_JAIKUA010000460.1:1..320;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000460.1 RefSeq gene 1 312 . + . ID=gene-L2557_RS17815;Name=L2557_RS17815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17815;partial=true;start_range=.,1 NZ_JAIKUA010000460.1 Protein Homology CDS 1 312 . + 0 ID=cds-WP_235410293.1;Parent=gene-L2557_RS17815;Dbxref=GenBank:WP_235410293.1;Name=WP_235410293.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827364.1;locus_tag=L2557_RS17815;partial=true;product=IpaD/SipD/SspD family type III secretion system needle tip protein;protein_id=WP_235410293.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000461.1 1 361 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000461.1 RefSeq region 1 361 . + . ID=NZ_JAIKUA010000461.1:1..361;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000461.1 RefSeq pseudogene 137 361 . + . ID=gene-L2557_RS17820;Name=L2557_RS17820;end_range=361,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17820;partial=true;pseudo=true NZ_JAIKUA010000461.1 Protein Homology CDS 137 361 . + 0 ID=cds-L2557_RS17820;Parent=gene-L2557_RS17820;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;end_range=361,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251837.1;locus_tag=L2557_RS17820;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAIKUA010000462.1 1 662 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000462.1 RefSeq region 1 662 . + . ID=NZ_JAIKUA010000462.1:1..662;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000462.1 RefSeq pseudogene 1 545 . - . ID=gene-L2557_RS17825;Name=L2557_RS17825;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17825;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000462.1 Protein Homology CDS 1 545 . - 0 ID=cds-L2557_RS17825;Parent=gene-L2557_RS17825;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001748002.1;locus_tag=L2557_RS17825;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000463.1 1 539 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000463.1 RefSeq region 1 539 . + . ID=NZ_JAIKUA010000463.1:1..539;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000463.1 RefSeq gene 314 539 . + . ID=gene-L2557_RS17830;Name=L2557_RS17830;end_range=539,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17830;partial=true NZ_JAIKUA010000463.1 GeneMarkS-2+ CDS 314 539 . + 0 ID=cds-WP_235410294.1;Parent=gene-L2557_RS17830;Dbxref=GenBank:WP_235410294.1;Name=WP_235410294.1;end_range=539,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17830;partial=true;product=hypothetical protein;protein_id=WP_235410294.1;transl_table=11 ##sequence-region NZ_JAIKUA010000464.1 1 319 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000464.1 RefSeq region 1 319 . + . ID=NZ_JAIKUA010000464.1:1..319;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000464.1 RefSeq gene 1 282 . + . ID=gene-L2557_RS17835;Name=L2557_RS17835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17835;partial=true;start_range=.,1 NZ_JAIKUA010000464.1 GeneMarkS-2+ CDS 1 282 . + 0 ID=cds-WP_235410295.1;Parent=gene-L2557_RS17835;Dbxref=GenBank:WP_235410295.1;Name=WP_235410295.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17835;partial=true;product=hypothetical protein;protein_id=WP_235410295.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000465.1 1 228 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000465.1 RefSeq region 1 228 . + . ID=NZ_JAIKUA010000465.1:1..228;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000466.1 1 708 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000466.1 RefSeq region 1 708 . + . ID=NZ_JAIKUA010000466.1:1..708;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000466.1 RefSeq gene 126 708 . + . ID=gene-L2557_RS17840;Name=L2557_RS17840;end_range=708,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17840;partial=true NZ_JAIKUA010000466.1 GeneMarkS-2+ CDS 126 708 . + 0 ID=cds-WP_235410296.1;Parent=gene-L2557_RS17840;Dbxref=GenBank:WP_235410296.1;Name=WP_235410296.1;end_range=708,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17840;partial=true;product=hypothetical protein;protein_id=WP_235410296.1;transl_table=11 ##sequence-region NZ_JAIKUA010000467.1 1 765 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000467.1 RefSeq region 1 765 . + . ID=NZ_JAIKUA010000467.1:1..765;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000467.1 RefSeq gene 292 711 . - . ID=gene-L2557_RS17845;Name=L2557_RS17845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17845 NZ_JAIKUA010000467.1 Protein Homology CDS 292 711 . - 0 ID=cds-WP_099660537.1;Parent=gene-L2557_RS17845;Dbxref=GenBank:WP_099660537.1;Name=WP_099660537.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006532973.1;locus_tag=L2557_RS17845;product=hypothetical protein;protein_id=WP_099660537.1;transl_table=11 ##sequence-region NZ_JAIKUA010000468.1 1 267 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000468.1 RefSeq region 1 267 . + . ID=NZ_JAIKUA010000468.1:1..267;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000468.1 RefSeq gene 1 267 . + . ID=gene-L2557_RS17850;Name=L2557_RS17850;end_range=267,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17850;partial=true;start_range=.,1 NZ_JAIKUA010000468.1 Protein Homology CDS 1 267 . + 2 ID=cds-WP_235410297.1;Parent=gene-L2557_RS17850;Dbxref=GenBank:WP_235410297.1;Name=WP_235410297.1;end_range=267,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367435.1;locus_tag=L2557_RS17850;partial=true;product=hypothetical protein;protein_id=WP_235410297.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000469.1 1 428 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000469.1 RefSeq region 1 428 . + . ID=NZ_JAIKUA010000469.1:1..428;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000469.1 RefSeq gene 1 214 . + . ID=gene-L2557_RS17855;Name=L2557_RS17855;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17855;partial=true;start_range=.,1 NZ_JAIKUA010000469.1 Protein Homology CDS 1 214 . + 1 ID=cds-WP_235410298.1;Parent=gene-L2557_RS17855;Dbxref=GenBank:WP_235410298.1;Name=WP_235410298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536734.1;locus_tag=L2557_RS17855;partial=true;product=CatA-like O-acetyltransferase;protein_id=WP_235410298.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000047.1 1 1872 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000047.1 RefSeq region 1 1872 . + . ID=NZ_JAIKUA010000047.1:1..1872;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000047.1 RefSeq gene 126 380 . - . ID=gene-L2557_RS04215;Name=bssS;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;locus_tag=L2557_RS04215 NZ_JAIKUA010000047.1 Protein Homology CDS 126 380 . - 0 ID=cds-WP_075673847.1;Parent=gene-L2557_RS04215;Dbxref=GenBank:WP_075673847.1;Name=WP_075673847.1;gbkey=CDS;gene=bssS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248355.1;locus_tag=L2557_RS04215;product=biofilm formation regulator BssS;protein_id=WP_075673847.1;transl_table=11 NZ_JAIKUA010000047.1 RefSeq gene 592 1644 . - . ID=gene-L2557_RS04220;Name=pyrC;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=L2557_RS04220 NZ_JAIKUA010000047.1 Protein Homology CDS 592 1644 . - 0 ID=cds-WP_075673848.1;Parent=gene-L2557_RS04220;Dbxref=GenBank:WP_075673848.1;Name=WP_075673848.1;Ontology_term=GO:0019856,GO:0004151;gbkey=CDS;gene=pyrC;go_function=dihydroorotase activity|0004151||IEA;go_process=pyrimidine nucleobase biosynthetic process|0019856||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243575.1;locus_tag=L2557_RS04220;product=dihydroorotase;protein_id=WP_075673848.1;transl_table=11 ##sequence-region NZ_JAIKUA010000470.1 1 232 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000470.1 RefSeq region 1 232 . + . ID=NZ_JAIKUA010000470.1:1..232;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000470.1 RefSeq gene 1 182 . - . ID=gene-L2557_RS17860;Name=L2557_RS17860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17860;partial=true;start_range=.,1 NZ_JAIKUA010000470.1 GeneMarkS-2+ CDS 1 182 . - 0 ID=cds-WP_235410299.1;Parent=gene-L2557_RS17860;Dbxref=GenBank:WP_235410299.1;Name=WP_235410299.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17860;partial=true;product=hypothetical protein;protein_id=WP_235410299.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000471.1 1 249 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000471.1 RefSeq region 1 249 . + . ID=NZ_JAIKUA010000471.1:1..249;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000471.1 RefSeq gene 1 249 . + . ID=gene-L2557_RS17865;Name=L2557_RS17865;end_range=249,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17865;partial=true;start_range=.,1 NZ_JAIKUA010000471.1 GeneMarkS-2+ CDS 1 249 . + 2 ID=cds-WP_235410300.1;Parent=gene-L2557_RS17865;Dbxref=GenBank:WP_235410300.1;Name=WP_235410300.1;end_range=249,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17865;partial=true;product=hypothetical protein;protein_id=WP_235410300.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000472.1 1 1436 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000472.1 RefSeq region 1 1436 . + . ID=NZ_JAIKUA010000472.1:1..1436;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000472.1 RefSeq gene 180 1109 . + . ID=gene-L2557_RS17870;Name=lpxL;gbkey=Gene;gene=lpxL;gene_biotype=protein_coding;locus_tag=L2557_RS17870 NZ_JAIKUA010000472.1 Protein Homology CDS 180 1109 . + 0 ID=cds-WP_075674312.1;Parent=gene-L2557_RS17870;Dbxref=GenBank:WP_075674312.1;Name=WP_075674312.1;Ontology_term=GO:0009245,GO:0016746,GO:0016020;gbkey=CDS;gene=lpxL;go_component=membrane|0016020||IEA;go_function=acyltransferase activity|0016746||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004259939.1;locus_tag=L2557_RS17870;product=LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase;protein_id=WP_075674312.1;transl_table=11 ##sequence-region NZ_JAIKUA010000473.1 1 567 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000473.1 RefSeq region 1 567 . + . ID=NZ_JAIKUA010000473.1:1..567;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000474.1 1 238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000474.1 RefSeq region 1 238 . + . ID=NZ_JAIKUA010000474.1:1..238;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000475.1 1 391 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000475.1 RefSeq region 1 391 . + . ID=NZ_JAIKUA010000475.1:1..391;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000475.1 RefSeq gene 1 391 . - . ID=gene-L2557_RS17875;Name=L2557_RS17875;end_range=391,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17875;partial=true;start_range=.,1 NZ_JAIKUA010000475.1 GeneMarkS-2+ CDS 1 391 . - 0 ID=cds-WP_235410301.1;Parent=gene-L2557_RS17875;Dbxref=GenBank:WP_235410301.1;Name=WP_235410301.1;end_range=391,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17875;partial=true;product=hypothetical protein;protein_id=WP_235410301.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000476.1 1 226 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000476.1 RefSeq region 1 226 . + . ID=NZ_JAIKUA010000476.1:1..226;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000477.1 1 528 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000477.1 RefSeq region 1 528 . + . ID=NZ_JAIKUA010000477.1:1..528;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000477.1 RefSeq pseudogene 1 505 . + . ID=gene-L2557_RS17880;Name=L2557_RS17880;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17880;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000477.1 Protein Homology CDS 1 505 . + 1 ID=cds-L2557_RS17880;Parent=gene-L2557_RS17880;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367854.1;locus_tag=L2557_RS17880;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000478.1 1 371 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000478.1 RefSeq region 1 371 . + . ID=NZ_JAIKUA010000478.1:1..371;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000479.1 1 510 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000479.1 RefSeq region 1 510 . + . ID=NZ_JAIKUA010000479.1:1..510;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000479.1 RefSeq pseudogene 1 510 . - . ID=gene-L2557_RS17885;Name=L2557_RS17885;end_range=510,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17885;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000479.1 GeneMarkS-2+ CDS 1 510 . - 0 ID=cds-L2557_RS17885;Parent=gene-L2557_RS17885;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=510,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17885;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000048.1 1 238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000048.1 RefSeq region 1 238 . + . ID=NZ_JAIKUA010000048.1:1..238;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000480.1 1 207 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000480.1 RefSeq region 1 207 . + . ID=NZ_JAIKUA010000480.1:1..207;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000480.1 RefSeq gene 8 163 . - . ID=gene-L2557_RS17890;Name=L2557_RS17890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17890 NZ_JAIKUA010000480.1 Protein Homology CDS 8 163 . - 0 ID=cds-WP_235410302.1;Parent=gene-L2557_RS17890;Dbxref=GenBank:WP_235410302.1;Name=WP_235410302.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247407.1;locus_tag=L2557_RS17890;product=hypothetical protein;protein_id=WP_235410302.1;transl_table=11 ##sequence-region NZ_JAIKUA010000481.1 1 271 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000481.1 RefSeq region 1 271 . + . ID=NZ_JAIKUA010000481.1:1..271;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000482.1 1 238 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000482.1 RefSeq region 1 238 . + . ID=NZ_JAIKUA010000482.1:1..238;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000483.1 1 221 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000483.1 RefSeq region 1 221 . + . ID=NZ_JAIKUA010000483.1:1..221;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000484.1 1 262 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000484.1 RefSeq region 1 262 . + . ID=NZ_JAIKUA010000484.1:1..262;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000484.1 RefSeq gene 1 262 . - . ID=gene-L2557_RS17895;Name=L2557_RS17895;end_range=262,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17895;partial=true;start_range=.,1 NZ_JAIKUA010000484.1 GeneMarkS-2+ CDS 1 262 . - 2 ID=cds-WP_235410303.1;Parent=gene-L2557_RS17895;Dbxref=GenBank:WP_235410303.1;Name=WP_235410303.1;end_range=262,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17895;partial=true;product=hypothetical protein;protein_id=WP_235410303.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000485.1 1 552 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000485.1 RefSeq region 1 552 . + . ID=NZ_JAIKUA010000485.1:1..552;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000485.1 RefSeq gene 1 552 . - . ID=gene-L2557_RS17900;Name=L2557_RS17900;end_range=552,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17900;partial=true;start_range=.,1 NZ_JAIKUA010000485.1 Protein Homology CDS 1 552 . - 1 ID=cds-WP_235410304.1;Parent=gene-L2557_RS17900;Dbxref=GenBank:WP_235410304.1;Name=WP_235410304.1;Ontology_term=GO:0009101,GO:0016757;end_range=552,.;gbkey=CDS;go_function=glycosyltransferase activity|0016757||IEA;go_process=glycoprotein biosynthetic process|0009101||IEA;inference=COORDINATES: protein motif:HMM:NF012744.6;locus_tag=L2557_RS17900;partial=true;product=glycosyltransferase family 4 protein;protein_id=WP_235410304.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000486.1 1 224 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000486.1 RefSeq region 1 224 . + . ID=NZ_JAIKUA010000486.1:1..224;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000486.1 RefSeq pseudogene 1 224 . + . ID=gene-L2557_RS17905;Name=L2557_RS17905;end_range=224,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS17905;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000486.1 GeneMarkS-2+ CDS 1 224 . + 1 ID=cds-L2557_RS17905;Parent=gene-L2557_RS17905;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=224,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17905;partial=true;product=nucleotidyltransferase domain-containing protein;pseudo=true;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000487.1 1 224 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000487.1 RefSeq region 1 224 . + . ID=NZ_JAIKUA010000487.1:1..224;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000487.1 RefSeq gene 1 224 . + . ID=gene-L2557_RS17910;Name=L2557_RS17910;end_range=224,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17910;partial=true;start_range=.,1 NZ_JAIKUA010000487.1 GeneMarkS-2+ CDS 1 224 . + 1 ID=cds-WP_235410305.1;Parent=gene-L2557_RS17910;Dbxref=GenBank:WP_235410305.1;Name=WP_235410305.1;end_range=224,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS17910;partial=true;product=hypothetical protein;protein_id=WP_235410305.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000049.1 1 9045 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000049.1 RefSeq region 1 9045 . + . ID=NZ_JAIKUA010000049.1:1..9045;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000049.1 RefSeq gene 1 1326 . + . ID=gene-L2557_RS04225;Name=L2557_RS04225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04225;partial=true;start_range=.,1 NZ_JAIKUA010000049.1 Protein Homology CDS 1 1326 . + 0 ID=cds-WP_235409847.1;Parent=gene-L2557_RS04225;Dbxref=GenBank:WP_235409847.1;Name=WP_235409847.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313132.1;locus_tag=L2557_RS04225;partial=true;product=anaerobic C4-dicarboxylate transporter;protein_id=WP_235409847.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000049.1 RefSeq gene 1399 2556 . - . ID=gene-L2557_RS04230;Name=pheA;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=L2557_RS04230 NZ_JAIKUA010000049.1 Protein Homology CDS 1399 2556 . - 0 ID=cds-WP_075672425.1;Parent=gene-L2557_RS04230;Dbxref=GenBank:WP_075672425.1;Name=WP_075672425.1;Ontology_term=GO:0009094,GO:0046417,GO:0004106,GO:0004664;gbkey=CDS;gene=pheA;go_function=chorismate mutase activity|0004106||IEA,prephenate dehydratase activity|0004664||IEA;go_process=L-phenylalanine biosynthetic process|0009094||IEA,chorismate metabolic process|0046417||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628348.1;locus_tag=L2557_RS04230;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=WP_075672425.1;transl_table=11 NZ_JAIKUA010000049.1 cmsearch sequence_feature 2592 2707 . - . ID=id-NZ_JAIKUA010000049.1:2592..2707;Dbxref=RFAM:RF01859;Note=Phe leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JAIKUA010000049.1 RefSeq gene 2862 3197 . - . ID=gene-L2557_RS04235;Name=raiA;gbkey=Gene;gene=raiA;gene_biotype=protein_coding;locus_tag=L2557_RS04235 NZ_JAIKUA010000049.1 Protein Homology CDS 2862 3197 . - 0 ID=cds-WP_075672427.1;Parent=gene-L2557_RS04235;Dbxref=GenBank:WP_075672427.1;Name=WP_075672427.1;gbkey=CDS;gene=raiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244763.1;locus_tag=L2557_RS04235;product=ribosome-associated translation inhibitor RaiA;protein_id=WP_075672427.1;transl_table=11 NZ_JAIKUA010000049.1 RefSeq gene 3469 4203 . - . ID=gene-L2557_RS04240;Name=bamD;gbkey=Gene;gene=bamD;gene_biotype=protein_coding;locus_tag=L2557_RS04240 NZ_JAIKUA010000049.1 Protein Homology CDS 3469 4203 . - 0 ID=cds-WP_075672429.1;Parent=gene-L2557_RS04240;Dbxref=GenBank:WP_075672429.1;Name=WP_075672429.1;gbkey=CDS;gene=bamD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367573.1;locus_tag=L2557_RS04240;product=outer membrane protein assembly factor BamD;protein_id=WP_075672429.1;transl_table=11 NZ_JAIKUA010000049.1 RefSeq gene 4339 5316 . + . ID=gene-L2557_RS04245;Name=rluD;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=L2557_RS04245 NZ_JAIKUA010000049.1 Protein Homology CDS 4339 5316 . + 0 ID=cds-WP_075672439.1;Parent=gene-L2557_RS04245;Dbxref=GenBank:WP_075672439.1;Name=WP_075672439.1;Ontology_term=GO:0001522,GO:0009451,GO:0003723,GO:0009982;gbkey=CDS;gene=rluD;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA,RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016603421.1;locus_tag=L2557_RS04245;product=23S rRNA pseudouridine(1911/1915/1917) synthase RluD;protein_id=WP_075672439.1;transl_table=11 NZ_JAIKUA010000049.1 RefSeq gene 5317 6048 . + . ID=gene-L2557_RS04250;Name=yfiH;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=L2557_RS04250 NZ_JAIKUA010000049.1 Protein Homology CDS 5317 6048 . + 0 ID=cds-WP_075672441.1;Parent=gene-L2557_RS04250;Dbxref=GenBank:WP_075672441.1;Name=WP_075672441.1;Ontology_term=GO:0004000,GO:0004731,GO:0042803;gbkey=CDS;gene=yfiH;go_function=adenosine deaminase activity|0004000||IEA,purine-nucleoside phosphorylase activity|0004731||IEA,protein homodimerization activity|0042803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827483.1;locus_tag=L2557_RS04250;product=purine nucleoside phosphorylase YfiH;protein_id=WP_075672441.1;transl_table=11 NZ_JAIKUA010000049.1 RefSeq gene 6195 8768 . + . ID=gene-L2557_RS04255;Name=clpB;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=L2557_RS04255 NZ_JAIKUA010000049.1 Protein Homology CDS 6195 8768 . + 0 ID=cds-WP_075672443.1;Parent=gene-L2557_RS04255;Dbxref=GenBank:WP_075672443.1;Name=WP_075672443.1;Ontology_term=GO:0009408,GO:0042026,GO:0005524,GO:0016887;gbkey=CDS;gene=clpB;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=response to heat|0009408||IEA,protein refolding|0042026||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002461515.1;locus_tag=L2557_RS04255;product=ATP-dependent chaperone ClpB;protein_id=WP_075672443.1;transl_table=11 ##sequence-region NZ_JAIKUA010000005.1 1 9942 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000005.1 RefSeq region 1 9942 . + . ID=NZ_JAIKUA010000005.1:1..9942;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000005.1 RefSeq gene 107 664 . - . ID=gene-L2557_RS00515;Name=frr;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=L2557_RS00515 NZ_JAIKUA010000005.1 Protein Homology CDS 107 664 . - 0 ID=cds-WP_075671704.1;Parent=gene-L2557_RS00515;Dbxref=GenBank:WP_075671704.1;Name=WP_075671704.1;Ontology_term=GO:0006412,GO:0008135;gbkey=CDS;gene=frr;go_function=translation factor activity%2C RNA binding|0008135||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011145051.1;locus_tag=L2557_RS00515;product=ribosome recycling factor;protein_id=WP_075671704.1;transl_table=11 NZ_JAIKUA010000005.1 RefSeq gene 778 1506 . - . ID=gene-L2557_RS00520;Name=pyrH;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=L2557_RS00520 NZ_JAIKUA010000005.1 Protein Homology CDS 778 1506 . - 0 ID=cds-WP_023582710.1;Parent=gene-L2557_RS00520;Dbxref=GenBank:WP_023582710.1;Name=WP_023582710.1;Ontology_term=GO:0006221,GO:0015949,GO:0033862,GO:0005737;gbkey=CDS;gene=pyrH;go_component=cytoplasm|0005737||IEA;go_function=UMP kinase activity|0033862||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA,nucleobase-containing small molecule interconversion|0015949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245471.1;locus_tag=L2557_RS00520;product=UMP kinase;protein_id=WP_023582710.1;transl_table=11 NZ_JAIKUA010000005.1 RefSeq gene 1643 2494 . - . ID=gene-L2557_RS00525;Name=tsf;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=L2557_RS00525 NZ_JAIKUA010000005.1 Protein Homology CDS 1643 2494 . - 0 ID=cds-WP_075671706.1;Parent=gene-L2557_RS00525;Dbxref=GenBank:WP_075671706.1;Name=WP_075671706.1;Ontology_term=GO:0006414,GO:0003746;gbkey=CDS;gene=tsf;go_function=translation elongation factor activity|0003746||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814046.1;locus_tag=L2557_RS00525;product=translation elongation factor Ts;protein_id=WP_075671706.1;transl_table=11 NZ_JAIKUA010000005.1 RefSeq gene 2630 3355 . - . ID=gene-L2557_RS00530;Name=rpsB;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=L2557_RS00530 NZ_JAIKUA010000005.1 Protein Homology CDS 2630 3355 . - 0 ID=cds-WP_023582712.1;Parent=gene-L2557_RS00530;Dbxref=GenBank:WP_023582712.1;Name=WP_023582712.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsB;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132117.1;locus_tag=L2557_RS00530;product=30S ribosomal protein S2;protein_id=WP_023582712.1;transl_table=11 NZ_JAIKUA010000005.1 RefSeq gene 3953 4750 . + . ID=gene-L2557_RS00535;Name=map;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=L2557_RS00535 NZ_JAIKUA010000005.1 Protein Homology CDS 3953 4750 . + 0 ID=cds-WP_075671708.1;Parent=gene-L2557_RS00535;Dbxref=GenBank:WP_075671708.1;Name=WP_075671708.1;Ontology_term=GO:0006508,GO:0070006;gbkey=CDS;gene=map;go_function=metalloaminopeptidase activity|0070006||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245478.1;locus_tag=L2557_RS00535;product=type I methionyl aminopeptidase;protein_id=WP_075671708.1;transl_table=11 NZ_JAIKUA010000005.1 RefSeq gene 4904 7549 . + . ID=gene-L2557_RS00540;Name=glnD;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=L2557_RS00540 NZ_JAIKUA010000005.1 Protein Homology CDS 4904 7549 . + 0 ID=cds-WP_235409724.1;Parent=gene-L2557_RS00540;Dbxref=GenBank:WP_235409724.1;Name=WP_235409724.1;Ontology_term=GO:0008152,GO:0016779;gbkey=CDS;gene=glnD;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=metabolic process|0008152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628587.1;locus_tag=L2557_RS00540;product=bifunctional uridylyltransferase/uridylyl-removing protein GlnD;protein_id=WP_235409724.1;transl_table=11 NZ_JAIKUA010000005.1 RefSeq gene 7584 8408 . + . ID=gene-L2557_RS00545;Name=dapD;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=L2557_RS00545 NZ_JAIKUA010000005.1 Protein Homology CDS 7584 8408 . + 0 ID=cds-WP_098942006.1;Parent=gene-L2557_RS00545;Dbxref=GenBank:WP_098942006.1;Name=WP_098942006.1;Ontology_term=GO:0009089,GO:0008666;gbkey=CDS;gene=dapD;go_function=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase activity|0008666||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132123.1;locus_tag=L2557_RS00545;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylate N-succinyltransferase;protein_id=WP_098942006.1;transl_table=11 NZ_JAIKUA010000005.1 RefSeq gene 8479 8865 . + . ID=gene-L2557_RS00550;Name=L2557_RS00550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00550 NZ_JAIKUA010000005.1 Protein Homology CDS 8479 8865 . + 0 ID=cds-WP_006535910.1;Parent=gene-L2557_RS00550;Dbxref=GenBank:WP_006535910.1;Name=WP_006535910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011145044.1;locus_tag=L2557_RS00550;product=DUF3461 family protein;protein_id=WP_006535910.1;transl_table=11 NZ_JAIKUA010000005.1 RefSeq gene 9010 9453 . - . ID=gene-L2557_RS00555;Name=L2557_RS00555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00555 NZ_JAIKUA010000005.1 Protein Homology CDS 9010 9453 . - 0 ID=cds-WP_099660189.1;Parent=gene-L2557_RS00555;Dbxref=GenBank:WP_099660189.1;Name=WP_099660189.1;Ontology_term=GO:0010181;gbkey=CDS;go_function=FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249511.1;locus_tag=L2557_RS00555;product=flavodoxin;protein_id=WP_099660189.1;transl_table=11 NZ_JAIKUA010000005.1 RefSeq pseudogene 9636 9942 . - . ID=gene-L2557_RS00560;Name=L2557_RS00560;end_range=9942,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS00560;partial=true;pseudo=true NZ_JAIKUA010000005.1 GeneMarkS-2+ CDS 9636 9942 . - 1 ID=cds-L2557_RS00560;Parent=gene-L2557_RS00560;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=9942,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS00560;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAIKUA010000050.1 1 29328 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000050.1 RefSeq region 1 29328 . + . ID=NZ_JAIKUA010000050.1:1..29328;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000050.1 RefSeq gene 472 1299 . + . ID=gene-L2557_RS04260;Name=budA;gbkey=Gene;gene=budA;gene_biotype=protein_coding;locus_tag=L2557_RS04260 NZ_JAIKUA010000050.1 Protein Homology CDS 472 1299 . + 0 ID=cds-WP_235409849.1;Parent=gene-L2557_RS04260;Dbxref=GenBank:WP_235409849.1;Name=WP_235409849.1;Ontology_term=GO:0045151,GO:0047605;gbkey=CDS;gene=budA;go_function=acetolactate decarboxylase activity|0047605||IEA;go_process=acetoin biosynthetic process|0045151||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004960170.1;locus_tag=L2557_RS04260;product=acetolactate decarboxylase;protein_id=WP_235409849.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 1367 3046 . + . ID=gene-L2557_RS04265;Name=alsS;gbkey=Gene;gene=alsS;gene_biotype=protein_coding;locus_tag=L2557_RS04265 NZ_JAIKUA010000050.1 Protein Homology CDS 1367 3046 . + 0 ID=cds-WP_099660339.1;Parent=gene-L2557_RS04265;Dbxref=GenBank:WP_099660339.1;Name=WP_099660339.1;Ontology_term=GO:0034077,GO:0000287,GO:0003984,GO:0030976;gbkey=CDS;gene=alsS;go_function=magnesium ion binding|0000287||IEA,acetolactate synthase activity|0003984||IEA,thiamine pyrophosphate binding|0030976||IEA;go_process=butanediol metabolic process|0034077||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367840.1;locus_tag=L2557_RS04265;product=acetolactate synthase AlsS;protein_id=WP_099660339.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 3408 3836 . + . ID=gene-L2557_RS04270;Name=L2557_RS04270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04270 NZ_JAIKUA010000050.1 Protein Homology CDS 3408 3836 . + 0 ID=cds-WP_235409851.1;Parent=gene-L2557_RS04270;Dbxref=GenBank:WP_235409851.1;Name=WP_235409851.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012135038.1;locus_tag=L2557_RS04270;product=PPC domain-containing DNA-binding protein;protein_id=WP_235409851.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 3913 4494 . + . ID=gene-L2557_RS04275;Name=L2557_RS04275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04275 NZ_JAIKUA010000050.1 Protein Homology CDS 3913 4494 . + 0 ID=cds-WP_075670995.1;Parent=gene-L2557_RS04275;Dbxref=GenBank:WP_075670995.1;Name=WP_075670995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536533.1;locus_tag=L2557_RS04275;product=ECF transporter S component;protein_id=WP_075670995.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 4497 5201 . + . ID=gene-L2557_RS04280;Name=L2557_RS04280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04280 NZ_JAIKUA010000050.1 Protein Homology CDS 4497 5201 . + 0 ID=cds-WP_075670993.1;Parent=gene-L2557_RS04280;Dbxref=GenBank:WP_075670993.1;Name=WP_075670993.1;Ontology_term=GO:0055085;gbkey=CDS;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661610.1;locus_tag=L2557_RS04280;product=energy-coupling factor transporter transmembrane component T;protein_id=WP_075670993.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 5192 6037 . + . ID=gene-L2557_RS04285;Name=L2557_RS04285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04285 NZ_JAIKUA010000050.1 Protein Homology CDS 5192 6037 . + 0 ID=cds-WP_075670991.1;Parent=gene-L2557_RS04285;Dbxref=GenBank:WP_075670991.1;Name=WP_075670991.1;Ontology_term=GO:0055085,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910935.1;locus_tag=L2557_RS04285;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_075670991.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 6021 6842 . + . ID=gene-L2557_RS04290;Name=L2557_RS04290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04290 NZ_JAIKUA010000050.1 Protein Homology CDS 6021 6842 . + 0 ID=cds-WP_099660338.1;Parent=gene-L2557_RS04290;Dbxref=GenBank:WP_099660338.1;Name=WP_099660338.1;Ontology_term=GO:0055085,GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004920586.1;locus_tag=L2557_RS04290;product=energy-coupling factor ABC transporter ATP-binding protein;protein_id=WP_099660338.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 6911 7423 . + . ID=gene-L2557_RS04295;Name=L2557_RS04295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04295 NZ_JAIKUA010000050.1 Protein Homology CDS 6911 7423 . + 0 ID=cds-WP_099660337.1;Parent=gene-L2557_RS04295;Dbxref=GenBank:WP_099660337.1;Name=WP_099660337.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247952.1;locus_tag=L2557_RS04295;product=DedA family protein;protein_id=WP_099660337.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 7838 8872 . + . ID=gene-L2557_RS04300;Name=L2557_RS04300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04300 NZ_JAIKUA010000050.1 Protein Homology CDS 7838 8872 . + 0 ID=cds-WP_075670985.1;Parent=gene-L2557_RS04300;Dbxref=GenBank:WP_075670985.1;Name=WP_075670985.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242633.1;locus_tag=L2557_RS04300;product=TAXI family TRAP transporter solute-binding subunit;protein_id=WP_075670985.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 8885 10852 . + . ID=gene-L2557_RS04305;Name=L2557_RS04305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04305 NZ_JAIKUA010000050.1 Protein Homology CDS 8885 10852 . + 0 ID=cds-WP_159364036.1;Parent=gene-L2557_RS04305;Dbxref=GenBank:WP_159364036.1;Name=WP_159364036.1;Ontology_term=GO:0008643,GO:0022857,GO:0005886,GO:0031317;gbkey=CDS;go_component=plasma membrane|0005886||IEA,tripartite ATP-independent periplasmic transporter complex|0031317||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247951.1;locus_tag=L2557_RS04305;product=TRAP transporter permease;protein_id=WP_159364036.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 10853 11566 . + . ID=gene-L2557_RS04310;Name=L2557_RS04310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04310 NZ_JAIKUA010000050.1 Protein Homology CDS 10853 11566 . + 0 ID=cds-WP_235409853.1;Parent=gene-L2557_RS04310;Dbxref=GenBank:WP_235409853.1;Name=WP_235409853.1;Ontology_term=GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242631.1;locus_tag=L2557_RS04310;product=FadR/GntR family transcriptional regulator;protein_id=WP_235409853.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 11582 12784 . + . ID=gene-L2557_RS04315;Name=lhgO;gbkey=Gene;gene=lhgO;gene_biotype=protein_coding;locus_tag=L2557_RS04315 NZ_JAIKUA010000050.1 Protein Homology CDS 11582 12784 . + 0 ID=cds-WP_164530521.1;Parent=gene-L2557_RS04315;Dbxref=GenBank:WP_164530521.1;Name=WP_164530521.1;Ontology_term=GO:0016491;gbkey=CDS;gene=lhgO;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827233.1;locus_tag=L2557_RS04315;product=L-2-hydroxyglutarate oxidase;protein_id=WP_164530521.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 12853 13731 . - . ID=gene-L2557_RS04320;Name=L2557_RS04320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04320 NZ_JAIKUA010000050.1 Protein Homology CDS 12853 13731 . - 0 ID=cds-WP_075671140.1;Parent=gene-L2557_RS04320;Dbxref=GenBank:WP_075671140.1;Name=WP_075671140.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006324998.1;locus_tag=L2557_RS04320;product=LysR substrate-binding domain-containing protein;protein_id=WP_075671140.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 13903 14799 . + . ID=gene-L2557_RS04325;Name=bla;gbkey=Gene;gene=bla;gene_biotype=protein_coding;locus_tag=L2557_RS04325 NZ_JAIKUA010000050.1 Protein Homology CDS 13903 14799 . + 0 ID=cds-WP_075670977.1;Parent=gene-L2557_RS04325;Dbxref=GenBank:WP_075670977.1;Name=WP_075670977.1;Ontology_term=GO:0030655,GO:0046677,GO:0008800;gbkey=CDS;gene=bla;go_function=beta-lactamase activity|0008800||IEA;go_process=beta-lactam antibiotic catabolic process|0030655||IEA,response to antibiotic|0046677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005165780.1;locus_tag=L2557_RS04325;product=class A beta-lactamase;protein_id=WP_075670977.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 14981 15205 . + . ID=gene-L2557_RS04330;Name=L2557_RS04330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04330 NZ_JAIKUA010000050.1 GeneMarkS-2+ CDS 14981 15205 . + 0 ID=cds-WP_075670975.1;Parent=gene-L2557_RS04330;Dbxref=GenBank:WP_075670975.1;Name=WP_075670975.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS04330;product=hypothetical protein;protein_id=WP_075670975.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 15308 15772 . - . ID=gene-L2557_RS04335;Name=L2557_RS04335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04335 NZ_JAIKUA010000050.1 Protein Homology CDS 15308 15772 . - 0 ID=cds-WP_023582027.1;Parent=gene-L2557_RS04335;Dbxref=GenBank:WP_023582027.1;Name=WP_023582027.1;Ontology_term=GO:0043565;gbkey=CDS;go_function=sequence-specific DNA binding|0043565||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237343.1;locus_tag=L2557_RS04335;product=Lrp/AsnC family transcriptional regulator;protein_id=WP_023582027.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 15934 16545 . + . ID=gene-L2557_RS04340;Name=L2557_RS04340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04340 NZ_JAIKUA010000050.1 Protein Homology CDS 15934 16545 . + 0 ID=cds-WP_075670973.1;Parent=gene-L2557_RS04340;Dbxref=GenBank:WP_075670973.1;Name=WP_075670973.1;Ontology_term=GO:0006865,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250963.1;locus_tag=L2557_RS04340;product=LysE family translocator;protein_id=WP_075670973.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 16602 17171 . - . ID=gene-L2557_RS04345;Name=L2557_RS04345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04345 NZ_JAIKUA010000050.1 Protein Homology CDS 16602 17171 . - 0 ID=cds-WP_099660334.1;Parent=gene-L2557_RS04345;Dbxref=GenBank:WP_099660334.1;Name=WP_099660334.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536514.1;locus_tag=L2557_RS04345;product=HutD/Ves family protein;protein_id=WP_099660334.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 17286 18701 . - . ID=gene-L2557_RS04350;Name=L2557_RS04350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04350 NZ_JAIKUA010000050.1 Protein Homology CDS 17286 18701 . - 0 ID=cds-WP_075670969.1;Parent=gene-L2557_RS04350;Dbxref=GenBank:WP_075670969.1;Name=WP_075670969.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248187.1;locus_tag=L2557_RS04350;product=aminotransferase-like domain-containing protein;protein_id=WP_075670969.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 18839 20173 . + . ID=gene-L2557_RS04355;Name=L2557_RS04355;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04355 NZ_JAIKUA010000050.1 Protein Homology CDS 18839 20173 . + 0 ID=cds-WP_164530522.1;Parent=gene-L2557_RS04355;Dbxref=GenBank:WP_164530522.1;Name=WP_164530522.1;Ontology_term=GO:0009055,GO:0046872,GO:0016020,GO:0070069;gbkey=CDS;go_component=membrane|0016020||IEA,cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250961.1;locus_tag=L2557_RS04355;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_164530522.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 20163 21170 . + . ID=gene-L2557_RS04360;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=L2557_RS04360 NZ_JAIKUA010000050.1 Protein Homology CDS 20163 21170 . + 0 ID=cds-WP_099660332.1;Parent=gene-L2557_RS04360;Dbxref=GenBank:WP_099660332.1;Name=WP_099660332.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005161249.1;locus_tag=L2557_RS04360;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_099660332.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 21151 21312 . + . ID=gene-L2557_RS04365;Name=L2557_RS04365;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04365 NZ_JAIKUA010000050.1 Protein Homology CDS 21151 21312 . + 0 ID=cds-WP_074454095.1;Parent=gene-L2557_RS04365;Dbxref=GenBank:WP_074454095.1;Name=WP_074454095.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243187.1;locus_tag=L2557_RS04365;product=DUF2474 domain-containing protein;protein_id=WP_074454095.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 21929 22312 . + . ID=gene-L2557_RS04370;Name=L2557_RS04370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04370 NZ_JAIKUA010000050.1 Protein Homology CDS 21929 22312 . + 0 ID=cds-WP_075670963.1;Parent=gene-L2557_RS04370;Dbxref=GenBank:WP_075670963.1;Name=WP_075670963.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243189.1;locus_tag=L2557_RS04370;product=DUF805 domain-containing protein;protein_id=WP_075670963.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 22696 23541 . + . ID=gene-L2557_RS04375;Name=L2557_RS04375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04375 NZ_JAIKUA010000050.1 Protein Homology CDS 22696 23541 . + 0 ID=cds-WP_164530523.1;Parent=gene-L2557_RS04375;Dbxref=GenBank:WP_164530523.1;Name=WP_164530523.1;Ontology_term=GO:0015891,GO:0071949;gbkey=CDS;go_function=FAD binding|0071949||IEA;go_process=siderophore transport|0015891||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250958.1;locus_tag=L2557_RS04375;product=siderophore-interacting protein;protein_id=WP_164530523.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 23629 24336 . - . ID=gene-L2557_RS04380;Name=L2557_RS04380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04380 NZ_JAIKUA010000050.1 Protein Homology CDS 23629 24336 . - 0 ID=cds-WP_235409855.1;Parent=gene-L2557_RS04380;Dbxref=GenBank:WP_235409855.1;Name=WP_235409855.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: protein motif:HMM:NF012565.6;locus_tag=L2557_RS04380;product=fimbrial biogenesis chaperone;protein_id=WP_235409855.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 24349 25428 . - . ID=gene-L2557_RS04385;Name=L2557_RS04385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04385 NZ_JAIKUA010000050.1 Protein Homology CDS 24349 25428 . - 0 ID=cds-WP_099660330.1;Parent=gene-L2557_RS04385;Dbxref=GenBank:WP_099660330.1;Name=WP_099660330.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910570.1;locus_tag=L2557_RS04385;product=fimbrial protein;protein_id=WP_099660330.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 25440 27953 . - . ID=gene-L2557_RS04390;Name=L2557_RS04390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04390 NZ_JAIKUA010000050.1 Protein Homology CDS 25440 27953 . - 0 ID=cds-WP_235409856.1;Parent=gene-L2557_RS04390;Dbxref=GenBank:WP_235409856.1;Name=WP_235409856.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006658284.1;locus_tag=L2557_RS04390;product=fimbria/pilus outer membrane usher protein;protein_id=WP_235409856.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 27967 28659 . - . ID=gene-L2557_RS04395;Name=L2557_RS04395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04395 NZ_JAIKUA010000050.1 Protein Homology CDS 27967 28659 . - 0 ID=cds-WP_075670955.1;Parent=gene-L2557_RS04395;Dbxref=GenBank:WP_075670955.1;Name=WP_075670955.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006815986.1;locus_tag=L2557_RS04395;product=fimbrial biogenesis chaperone;protein_id=WP_075670955.1;transl_table=11 NZ_JAIKUA010000050.1 RefSeq gene 28707 29297 . - . ID=gene-L2557_RS04400;Name=L2557_RS04400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04400 NZ_JAIKUA010000050.1 Protein Homology CDS 28707 29297 . - 0 ID=cds-WP_075670953.1;Parent=gene-L2557_RS04400;Dbxref=GenBank:WP_075670953.1;Name=WP_075670953.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910573.1;locus_tag=L2557_RS04400;product=fimbrial protein;protein_id=WP_075670953.1;transl_table=11 ##sequence-region NZ_JAIKUA010000051.1 1 12612 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000051.1 RefSeq region 1 12612 . + . ID=NZ_JAIKUA010000051.1:1..12612;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000051.1 RefSeq gene 114 293 . + . ID=gene-L2557_RS04405;Name=L2557_RS04405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04405 NZ_JAIKUA010000051.1 Protein Homology CDS 114 293 . + 0 ID=cds-WP_004244593.1;Parent=gene-L2557_RS04405;Dbxref=GenBank:WP_004244593.1;Name=WP_004244593.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244593.1;locus_tag=L2557_RS04405;product=Trm112 family protein;protein_id=WP_004244593.1;transl_table=11 NZ_JAIKUA010000051.1 RefSeq gene 298 1059 . + . ID=gene-L2557_RS04410;Name=kdsB;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=L2557_RS04410 NZ_JAIKUA010000051.1 Protein Homology CDS 298 1059 . + 0 ID=cds-WP_099659767.1;Parent=gene-L2557_RS04410;Dbxref=GenBank:WP_099659767.1;Name=WP_099659767.1;Ontology_term=GO:0009244,GO:0008690;gbkey=CDS;gene=kdsB;go_function=3-deoxy-manno-octulosonate cytidylyltransferase activity|0008690||IEA;go_process=lipopolysaccharide core region biosynthetic process|0009244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244594.1;locus_tag=L2557_RS04410;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=WP_099659767.1;transl_table=11 NZ_JAIKUA010000051.1 RefSeq gene 1140 1970 . - . ID=gene-L2557_RS04415;Name=elyC;gbkey=Gene;gene=elyC;gene_biotype=protein_coding;locus_tag=L2557_RS04415 NZ_JAIKUA010000051.1 Protein Homology CDS 1140 1970 . - 0 ID=cds-WP_159363920.1;Parent=gene-L2557_RS04415;Dbxref=GenBank:WP_159363920.1;Name=WP_159363920.1;gbkey=CDS;gene=elyC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015840024.1;locus_tag=L2557_RS04415;product=envelope biogenesis factor ElyC;protein_id=WP_159363920.1;transl_table=11 NZ_JAIKUA010000051.1 RefSeq gene 2346 3119 . + . ID=gene-L2557_RS04420;Name=cmoM;gbkey=Gene;gene=cmoM;gene_biotype=protein_coding;locus_tag=L2557_RS04420 NZ_JAIKUA010000051.1 Protein Homology CDS 2346 3119 . + 0 ID=cds-WP_075673560.1;Parent=gene-L2557_RS04420;Dbxref=GenBank:WP_075673560.1;Name=WP_075673560.1;gbkey=CDS;gene=cmoM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244596.1;locus_tag=L2557_RS04420;product=tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM;protein_id=WP_075673560.1;transl_table=11 NZ_JAIKUA010000051.1 RefSeq gene 3129 4451 . + . ID=gene-L2557_RS04425;Name=mukF;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=L2557_RS04425 NZ_JAIKUA010000051.1 Protein Homology CDS 3129 4451 . + 0 ID=cds-WP_075673561.1;Parent=gene-L2557_RS04425;Dbxref=GenBank:WP_075673561.1;Name=WP_075673561.1;Ontology_term=GO:0007059,GO:0005509;gbkey=CDS;gene=mukF;go_function=calcium ion binding|0005509||IEA;go_process=chromosome segregation|0007059||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005123549.1;locus_tag=L2557_RS04425;product=chromosome partition protein MukF;protein_id=WP_075673561.1;transl_table=11 NZ_JAIKUA010000051.1 RefSeq gene 4432 5163 . + . ID=gene-L2557_RS04430;Name=mukE;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=L2557_RS04430 NZ_JAIKUA010000051.1 Protein Homology CDS 4432 5163 . + 0 ID=cds-WP_099659765.1;Parent=gene-L2557_RS04430;Dbxref=GenBank:WP_099659765.1;Name=WP_099659765.1;Ontology_term=GO:0007059,GO:0030261;gbkey=CDS;gene=mukE;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020438800.1;locus_tag=L2557_RS04430;product=chromosome partition protein MukE;protein_id=WP_099659765.1;transl_table=11 NZ_JAIKUA010000051.1 RefSeq gene 5160 9620 . + . ID=gene-L2557_RS04435;Name=mukB;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=L2557_RS04435 NZ_JAIKUA010000051.1 Protein Homology CDS 5160 9620 . + 0 ID=cds-WP_099659764.1;Parent=gene-L2557_RS04435;Dbxref=GenBank:WP_099659764.1;Name=WP_099659764.1;Ontology_term=GO:0007059,GO:0030261,GO:0003677;gbkey=CDS;gene=mukB;go_function=DNA binding|0003677||IEA;go_process=chromosome segregation|0007059||IEA,chromosome condensation|0030261||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367715.1;locus_tag=L2557_RS04435;product=chromosome partition protein MukB;protein_id=WP_099659764.1;transl_table=11 NZ_JAIKUA010000051.1 RefSeq gene 9844 10557 . + . ID=gene-L2557_RS04440;Name=aphA;gbkey=Gene;gene=aphA;gene_biotype=protein_coding;locus_tag=L2557_RS04440 NZ_JAIKUA010000051.1 Protein Homology CDS 9844 10557 . + 0 ID=cds-WP_075673564.1;Parent=gene-L2557_RS04440;Dbxref=GenBank:WP_075673564.1;Name=WP_075673564.1;Ontology_term=GO:0003993,GO:0030288;gbkey=CDS;gene=aphA;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_function=acid phosphatase activity|0003993||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247637.1;locus_tag=L2557_RS04440;product=acid phosphatase AphA;protein_id=WP_075673564.1;transl_table=11 NZ_JAIKUA010000051.1 RefSeq gene 10910 12612 . + . ID=gene-L2557_RS04445;Name=ldtD;end_range=12612,.;gbkey=Gene;gene=ldtD;gene_biotype=protein_coding;locus_tag=L2557_RS04445;partial=true NZ_JAIKUA010000051.1 Protein Homology CDS 10910 12612 . + 0 ID=cds-WP_235409859.1;Parent=gene-L2557_RS04445;Dbxref=GenBank:WP_235409859.1;Name=WP_235409859.1;Ontology_term=GO:0016740;end_range=12612,.;gbkey=CDS;gene=ldtD;go_function=transferase activity|0016740||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537397.1;locus_tag=L2557_RS04445;partial=true;product=L%2CD-transpeptidase;protein_id=WP_235409859.1;transl_table=11 ##sequence-region NZ_JAIKUA010000052.1 1 12286 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000052.1 RefSeq region 1 12286 . + . ID=NZ_JAIKUA010000052.1:1..12286;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000052.1 RefSeq gene 476 2041 . + . ID=gene-L2557_RS04450;Name=cydA;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=L2557_RS04450 NZ_JAIKUA010000052.1 Protein Homology CDS 476 2041 . + 0 ID=cds-WP_075672720.1;Parent=gene-L2557_RS04450;Dbxref=GenBank:WP_075672720.1;Name=WP_075672720.1;Ontology_term=GO:0019646,GO:0009055,GO:0070069;gbkey=CDS;gene=cydA;go_component=cytochrome complex|0070069||IEA;go_function=electron transfer activity|0009055||IEA;go_process=aerobic electron transport chain|0019646||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252190.1;locus_tag=L2557_RS04450;product=cytochrome ubiquinol oxidase subunit I;protein_id=WP_075672720.1;transl_table=11 NZ_JAIKUA010000052.1 RefSeq gene 2056 3213 . + . ID=gene-L2557_RS04455;Name=cydB;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=L2557_RS04455 NZ_JAIKUA010000052.1 Protein Homology CDS 2056 3213 . + 0 ID=cds-WP_075672721.1;Parent=gene-L2557_RS04455;Dbxref=GenBank:WP_075672721.1;Name=WP_075672721.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydB;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004393310.1;locus_tag=L2557_RS04455;product=cytochrome d ubiquinol oxidase subunit II;protein_id=WP_075672721.1;transl_table=11 NZ_JAIKUA010000052.1 RefSeq gene 3226 3339 . + . ID=gene-L2557_RS04460;Name=cydX;gbkey=Gene;gene=cydX;gene_biotype=protein_coding;gene_synonym=ybgT;locus_tag=L2557_RS04460 NZ_JAIKUA010000052.1 Protein Homology CDS 3226 3339 . + 0 ID=cds-WP_066751769.1;Parent=gene-L2557_RS04460;Dbxref=GenBank:WP_066751769.1;Name=WP_066751769.1;Ontology_term=GO:0016682;gbkey=CDS;gene=cydX;go_function=oxidoreductase activity%2C acting on diphenols and related substances as donors%2C oxygen as acceptor|0016682||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244425.1;locus_tag=L2557_RS04460;product=cytochrome bd-I oxidase subunit CydX;protein_id=WP_066751769.1;transl_table=11 NZ_JAIKUA010000052.1 RefSeq gene 3339 3623 . + . ID=gene-L2557_RS04465;Name=ybgE;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=L2557_RS04465 NZ_JAIKUA010000052.1 Protein Homology CDS 3339 3623 . + 0 ID=cds-WP_075672722.1;Parent=gene-L2557_RS04465;Dbxref=GenBank:WP_075672722.1;Name=WP_075672722.1;gbkey=CDS;gene=ybgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244426.1;locus_tag=L2557_RS04465;product=cyd operon protein YbgE;protein_id=WP_075672722.1;transl_table=11 NZ_JAIKUA010000052.1 RefSeq gene 3715 4602 . - . ID=gene-L2557_RS04470;Name=L2557_RS04470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04470 NZ_JAIKUA010000052.1 Protein Homology CDS 3715 4602 . - 0 ID=cds-WP_099659820.1;Parent=gene-L2557_RS04470;Dbxref=GenBank:WP_099659820.1;Name=WP_099659820.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537651.1;locus_tag=L2557_RS04470;product=LysR family transcriptional regulator;protein_id=WP_099659820.1;transl_table=11 NZ_JAIKUA010000052.1 RefSeq gene 4692 6062 . + . ID=gene-L2557_RS04475;Name=L2557_RS04475;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04475 NZ_JAIKUA010000052.1 Protein Homology CDS 4692 6062 . + 0 ID=cds-WP_235409861.1;Parent=gene-L2557_RS04475;Dbxref=GenBank:WP_235409861.1;Name=WP_235409861.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252183.1;locus_tag=L2557_RS04475;product=MFS transporter;protein_id=WP_235409861.1;transl_table=11 NZ_JAIKUA010000052.1 RefSeq gene 6052 6459 . + . ID=gene-L2557_RS04480;Name=L2557_RS04480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04480 NZ_JAIKUA010000052.1 Protein Homology CDS 6052 6459 . + 0 ID=cds-WP_075672725.1;Parent=gene-L2557_RS04480;Dbxref=GenBank:WP_075672725.1;Name=WP_075672725.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244431.1;locus_tag=L2557_RS04480;product=DUF4440 domain-containing protein;protein_id=WP_075672725.1;transl_table=11 NZ_JAIKUA010000052.1 RefSeq gene 6769 7164 . + . ID=gene-L2557_RS04485;Name=ybgC;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=L2557_RS04485 NZ_JAIKUA010000052.1 Protein Homology CDS 6769 7164 . + 0 ID=cds-WP_069370103.1;Parent=gene-L2557_RS04485;Dbxref=GenBank:WP_069370103.1;Name=WP_069370103.1;gbkey=CDS;gene=ybgC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247549.1;locus_tag=L2557_RS04485;product=tol-pal system-associated acyl-CoA thioesterase;protein_id=WP_069370103.1;transl_table=11 NZ_JAIKUA010000052.1 RefSeq gene 7164 7850 . + . ID=gene-L2557_RS04490;Name=tolQ;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=L2557_RS04490 NZ_JAIKUA010000052.1 Protein Homology CDS 7164 7850 . + 0 ID=cds-WP_075672726.1;Parent=gene-L2557_RS04490;Dbxref=GenBank:WP_075672726.1;Name=WP_075672726.1;gbkey=CDS;gene=tolQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210735.1;locus_tag=L2557_RS04490;product=Tol-Pal system protein TolQ;protein_id=WP_075672726.1;transl_table=11 NZ_JAIKUA010000052.1 RefSeq gene 7873 8298 . + . ID=gene-L2557_RS04495;Name=tolR;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=L2557_RS04495 NZ_JAIKUA010000052.1 Protein Homology CDS 7873 8298 . + 0 ID=cds-WP_023581195.1;Parent=gene-L2557_RS04495;Dbxref=GenBank:WP_023581195.1;Name=WP_023581195.1;gbkey=CDS;gene=tolR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009113764.1;locus_tag=L2557_RS04495;product=colicin uptake protein TolR;protein_id=WP_023581195.1;transl_table=11 NZ_JAIKUA010000052.1 RefSeq gene 8327 9346 . + . ID=gene-L2557_RS04500;Name=tolA;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=L2557_RS04500 NZ_JAIKUA010000052.1 Protein Homology CDS 8327 9346 . + 0 ID=cds-WP_235409863.1;Parent=gene-L2557_RS04500;Dbxref=GenBank:WP_235409863.1;Name=WP_235409863.1;Ontology_term=GO:0006810,GO:0005215,GO:0098567;gbkey=CDS;gene=tolA;go_component=periplasmic side of plasma membrane|0098567||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244436.1;locus_tag=L2557_RS04500;product=cell envelope integrity protein TolA;protein_id=WP_235409863.1;transl_table=11 NZ_JAIKUA010000052.1 RefSeq gene 9489 10784 . + . ID=gene-L2557_RS04505;Name=tolB;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=L2557_RS04505 NZ_JAIKUA010000052.1 Protein Homology CDS 9489 10784 . + 0 ID=cds-WP_075672728.1;Parent=gene-L2557_RS04505;Dbxref=GenBank:WP_075672728.1;Name=WP_075672728.1;Ontology_term=GO:0017038,GO:0005215,GO:0042597;gbkey=CDS;gene=tolB;go_component=periplasmic space|0042597||IEA;go_function=transporter activity|0005215||IEA;go_process=protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010989131.1;locus_tag=L2557_RS04505;product=Tol-Pal system beta propeller repeat protein TolB;protein_id=WP_075672728.1;transl_table=11 NZ_JAIKUA010000052.1 RefSeq gene 10830 11324 . + . ID=gene-L2557_RS04510;Name=pal;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=L2557_RS04510 NZ_JAIKUA010000052.1 Protein Homology CDS 10830 11324 . + 0 ID=cds-WP_075672729.1;Parent=gene-L2557_RS04510;Dbxref=GenBank:WP_075672729.1;Name=WP_075672729.1;gbkey=CDS;gene=pal;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210739.1;locus_tag=L2557_RS04510;product=peptidoglycan-associated lipoprotein Pal;protein_id=WP_075672729.1;transl_table=11 NZ_JAIKUA010000052.1 RefSeq gene 11334 12101 . + . ID=gene-L2557_RS04515;Name=ybgF;gbkey=Gene;gene=ybgF;gene_biotype=protein_coding;locus_tag=L2557_RS04515 NZ_JAIKUA010000052.1 Protein Homology CDS 11334 12101 . + 0 ID=cds-WP_075672730.1;Parent=gene-L2557_RS04515;Dbxref=GenBank:WP_075672730.1;Name=WP_075672730.1;Ontology_term=GO:0005515;gbkey=CDS;gene=ybgF;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210740.1;locus_tag=L2557_RS04515;product=tol-pal system protein YbgF;protein_id=WP_075672730.1;transl_table=11 ##sequence-region NZ_JAIKUA010000053.1 1 6326 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000053.1 RefSeq region 1 6326 . + . ID=NZ_JAIKUA010000053.1:1..6326;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000053.1 RefSeq gene 533 883 . + . ID=gene-L2557_RS04520;Name=flhD;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=L2557_RS04520 NZ_JAIKUA010000053.1 Protein Homology CDS 533 883 . + 0 ID=cds-WP_072063484.1;Parent=gene-L2557_RS04520;Dbxref=GenBank:WP_072063484.1;Name=WP_072063484.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhD;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847229.1;locus_tag=L2557_RS04520;product=flagellar transcriptional regulator FlhD;protein_id=WP_072063484.1;transl_table=11 NZ_JAIKUA010000053.1 RefSeq gene 886 1467 . + . ID=gene-L2557_RS04525;Name=flhC;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=L2557_RS04525 NZ_JAIKUA010000053.1 Protein Homology CDS 886 1467 . + 0 ID=cds-WP_006533207.1;Parent=gene-L2557_RS04525;Dbxref=GenBank:WP_006533207.1;Name=WP_006533207.1;Ontology_term=GO:0045893,GO:1902208,GO:0003677;gbkey=CDS;gene=flhC;go_function=DNA binding|0003677||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,regulation of bacterial-type flagellum assembly|1902208||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847228.1;locus_tag=L2557_RS04525;product=flagellar transcriptional regulator FlhC;protein_id=WP_006533207.1;transl_table=11 NZ_JAIKUA010000053.1 RefSeq gene 1602 2495 . + . ID=gene-L2557_RS04530;Name=motA;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=L2557_RS04530 NZ_JAIKUA010000053.1 Protein Homology CDS 1602 2495 . + 0 ID=cds-WP_036935706.1;Parent=gene-L2557_RS04530;Dbxref=GenBank:WP_036935706.1;Name=WP_036935706.1;gbkey=CDS;gene=motA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243566.1;locus_tag=L2557_RS04530;product=flagellar motor stator protein MotA;protein_id=WP_036935706.1;transl_table=11 NZ_JAIKUA010000053.1 RefSeq gene 2498 3544 . + . ID=gene-L2557_RS04535;Name=motB;gbkey=Gene;gene=motB;gene_biotype=protein_coding;locus_tag=L2557_RS04535 NZ_JAIKUA010000053.1 Protein Homology CDS 2498 3544 . + 0 ID=cds-WP_099660626.1;Parent=gene-L2557_RS04535;Dbxref=GenBank:WP_099660626.1;Name=WP_099660626.1;gbkey=CDS;gene=motB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243565.1;locus_tag=L2557_RS04535;product=flagellar motor protein MotB;protein_id=WP_099660626.1;transl_table=11 NZ_JAIKUA010000053.1 RefSeq gene 3640 5763 . + . ID=gene-L2557_RS04540;Name=cheA;gbkey=Gene;gene=cheA;gene_biotype=protein_coding;locus_tag=L2557_RS04540 NZ_JAIKUA010000053.1 Protein Homology CDS 3640 5763 . + 0 ID=cds-WP_373922207.1;Parent=gene-L2557_RS04540;Dbxref=GenBank:WP_373922207.1;Name=WP_373922207.1;Ontology_term=GO:0000160,GO:0006935,GO:0016310,GO:0000155;gbkey=CDS;gene=cheA;go_function=phosphorelay sensor kinase activity|0000155||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,chemotaxis|0006935||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: protein motif:HMM:NF007835.0;locus_tag=L2557_RS04540;product=chemotaxis protein CheA;protein_id=WP_373922207.1;transl_table=11 NZ_JAIKUA010000053.1 RefSeq gene 5785 6285 . + . ID=gene-L2557_RS04545;Name=cheW;gbkey=Gene;gene=cheW;gene_biotype=protein_coding;locus_tag=L2557_RS04545 NZ_JAIKUA010000053.1 Protein Homology CDS 5785 6285 . + 0 ID=cds-WP_023581802.1;Parent=gene-L2557_RS04545;Dbxref=GenBank:WP_023581802.1;Name=WP_023581802.1;gbkey=CDS;gene=cheW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243558.1;locus_tag=L2557_RS04545;product=chemotaxis protein CheW;protein_id=WP_023581802.1;transl_table=11 ##sequence-region NZ_JAIKUA010000054.1 1 42523 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000054.1 RefSeq region 1 42523 . + . ID=NZ_JAIKUA010000054.1:1..42523;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000054.1 RefSeq gene 57 995 . - . ID=gene-L2557_RS04550;Name=mdh;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=L2557_RS04550 NZ_JAIKUA010000054.1 Protein Homology CDS 57 995 . - 0 ID=cds-WP_099660271.1;Parent=gene-L2557_RS04550;Dbxref=GenBank:WP_099660271.1;Name=WP_099660271.1;Ontology_term=GO:0006099,GO:0030060;gbkey=CDS;gene=mdh;go_function=L-malate dehydrogenase (NAD+) activity|0030060||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000861594.1;locus_tag=L2557_RS04550;product=malate dehydrogenase;protein_id=WP_099660271.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 1443 1913 . + . ID=gene-L2557_RS04555;Name=argR;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=L2557_RS04555 NZ_JAIKUA010000054.1 Protein Homology CDS 1443 1913 . + 0 ID=cds-WP_006535714.1;Parent=gene-L2557_RS04555;Dbxref=GenBank:WP_006535714.1;Name=WP_006535714.1;gbkey=CDS;gene=argR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210173.1;locus_tag=L2557_RS04555;product=transcriptional regulator ArgR;protein_id=WP_006535714.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 1972 3351 . - . ID=gene-L2557_RS04560;Name=mpl;gbkey=Gene;gene=mpl;gene_biotype=protein_coding;locus_tag=L2557_RS04560 NZ_JAIKUA010000054.1 Protein Homology CDS 1972 3351 . - 0 ID=cds-WP_099660272.1;Parent=gene-L2557_RS04560;Dbxref=GenBank:WP_099660272.1;Name=WP_099660272.1;Ontology_term=GO:0009252,GO:0071555,GO:0016881;gbkey=CDS;gene=mpl;go_function=acid-amino acid ligase activity|0016881||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827594.1;locus_tag=L2557_RS04560;product=UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase;protein_id=WP_099660272.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 3517 4524 . + . ID=gene-L2557_RS04565;Name=fbp;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=L2557_RS04565 NZ_JAIKUA010000054.1 Protein Homology CDS 3517 4524 . + 0 ID=cds-WP_099660273.1;Parent=gene-L2557_RS04565;Dbxref=GenBank:WP_099660273.1;Name=WP_099660273.1;Ontology_term=GO:0005975,GO:0042132;gbkey=CDS;gene=fbp;go_function=fructose 1%2C6-bisphosphate 1-phosphatase activity|0042132||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535716.1;locus_tag=L2557_RS04565;product=class 1 fructose-bisphosphatase;protein_id=WP_099660273.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 4724 5251 . + . ID=gene-L2557_RS04570;Name=ppa;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=L2557_RS04570 NZ_JAIKUA010000054.1 Protein Homology CDS 4724 5251 . + 0 ID=cds-WP_006535717.1;Parent=gene-L2557_RS04570;Dbxref=GenBank:WP_006535717.1;Name=WP_006535717.1;Ontology_term=GO:0006796,GO:0004427;gbkey=CDS;gene=ppa;go_function=inorganic diphosphate phosphatase activity|0004427||IEA;go_process=phosphate-containing compound metabolic process|0006796||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134479.1;locus_tag=L2557_RS04570;product=inorganic diphosphatase;protein_id=WP_006535717.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 5582 7210 . + . ID=gene-L2557_RS04575;Name=L2557_RS04575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04575 NZ_JAIKUA010000054.1 Protein Homology CDS 5582 7210 . + 0 ID=cds-WP_099660274.1;Parent=gene-L2557_RS04575;Dbxref=GenBank:WP_099660274.1;Name=WP_099660274.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005296324.1;locus_tag=L2557_RS04575;product=sulfatase family protein;protein_id=WP_099660274.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 7300 7647 . - . ID=gene-L2557_RS04580;Name=L2557_RS04580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04580 NZ_JAIKUA010000054.1 Protein Homology CDS 7300 7647 . - 0 ID=cds-WP_075672807.1;Parent=gene-L2557_RS04580;Dbxref=GenBank:WP_075672807.1;Name=WP_075672807.1;Ontology_term=GO:0061929;gbkey=CDS;go_function=gamma-glutamylaminecyclotransferase activity|0061929||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246264.1;locus_tag=L2557_RS04580;product=gamma-glutamylcyclotransferase family protein;protein_id=WP_075672807.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 7653 11477 . - . ID=gene-L2557_RS04585;Name=tamB;gbkey=Gene;gene=tamB;gene_biotype=protein_coding;locus_tag=L2557_RS04585 NZ_JAIKUA010000054.1 Protein Homology CDS 7653 11477 . - 0 ID=cds-WP_268830823.1;Parent=gene-L2557_RS04585;Dbxref=GenBank:WP_268830823.1;Name=WP_268830823.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamB;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535725.1;locus_tag=L2557_RS04585;product=autotransporter assembly complex protein TamB;protein_id=WP_268830823.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 11474 13216 . - . ID=gene-L2557_RS04590;Name=tamA;gbkey=Gene;gene=tamA;gene_biotype=protein_coding;locus_tag=L2557_RS04590 NZ_JAIKUA010000054.1 Protein Homology CDS 11474 13216 . - 0 ID=cds-WP_159242216.1;Parent=gene-L2557_RS04590;Dbxref=GenBank:WP_159242216.1;Name=WP_159242216.1;Ontology_term=GO:0009306,GO:0089705;gbkey=CDS;gene=tamA;go_process=protein secretion|0009306||IEA,protein localization to outer membrane|0089705||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011191624.1;locus_tag=L2557_RS04590;product=autotransporter assembly complex protein TamA;protein_id=WP_159242216.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 13355 13981 . + . ID=gene-L2557_RS04595;Name=msrA;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=L2557_RS04595 NZ_JAIKUA010000054.1 Protein Homology CDS 13355 13981 . + 0 ID=cds-WP_223673745.1;Parent=gene-L2557_RS04595;Dbxref=GenBank:WP_223673745.1;Name=WP_223673745.1;Ontology_term=GO:0006979,GO:0030091,GO:0008113,GO:0033744;gbkey=CDS;gene=msrA;go_function=peptide-methionine (S)-S-oxide reductase activity|0008113||IEA,L-methionine (S)-S-oxide reductase activity|0033744||IEA;go_process=response to oxidative stress|0006979||IEA,protein repair|0030091||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535727.1;locus_tag=L2557_RS04595;product=peptide-methionine (S)-S-oxide reductase MsrA;protein_id=WP_223673745.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 14133 15512 . + . ID=gene-L2557_RS04600;Name=paeA;gbkey=Gene;gene=paeA;gene_biotype=protein_coding;gene_synonym=ytfL;locus_tag=L2557_RS04600 NZ_JAIKUA010000054.1 Protein Homology CDS 14133 15512 . + 0 ID=cds-WP_075672803.1;Parent=gene-L2557_RS04600;Dbxref=GenBank:WP_075672803.1;Name=WP_075672803.1;Ontology_term=GO:0050660;gbkey=CDS;gene=paeA;go_function=flavin adenine dinucleotide binding|0050660||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249615.1;locus_tag=L2557_RS04600;product=polyamine export protein PaeA;protein_id=WP_075672803.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 15592 15798 . - . ID=gene-L2557_RS04605;Name=L2557_RS04605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04605 NZ_JAIKUA010000054.1 Protein Homology CDS 15592 15798 . - 0 ID=cds-WP_006535730.1;Parent=gene-L2557_RS04605;Dbxref=GenBank:WP_006535730.1;Name=WP_006535730.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535730.1;locus_tag=L2557_RS04605;product=DUF1107 domain-containing protein;protein_id=WP_006535730.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 16082 16642 . + . ID=gene-L2557_RS04610;Name=L2557_RS04610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04610 NZ_JAIKUA010000054.1 Protein Homology CDS 16082 16642 . + 0 ID=cds-WP_099660277.1;Parent=gene-L2557_RS04610;Dbxref=GenBank:WP_099660277.1;Name=WP_099660277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253029.1;locus_tag=L2557_RS04610;product=YtfJ family protein;protein_id=WP_099660277.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 16696 17436 . - . ID=gene-L2557_RS04615;Name=cysQ;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=L2557_RS04615 NZ_JAIKUA010000054.1 Protein Homology CDS 16696 17436 . - 0 ID=cds-WP_075672801.1;Parent=gene-L2557_RS04615;Dbxref=GenBank:WP_075672801.1;Name=WP_075672801.1;Ontology_term=GO:0000287,GO:0008441;gbkey=CDS;gene=cysQ;go_function=magnesium ion binding|0000287||IEA,3'(2')%2C5'-bisphosphate nucleotidase activity|0008441||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002220539.1;locus_tag=L2557_RS04615;product=3'(2')%2C5'-bisphosphate nucleotidase CysQ;protein_id=WP_075672801.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 17579 18199 . - . ID=gene-L2557_RS04620;Name=L2557_RS04620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04620 NZ_JAIKUA010000054.1 Protein Homology CDS 17579 18199 . - 0 ID=cds-WP_075672800.1;Parent=gene-L2557_RS04620;Dbxref=GenBank:WP_075672800.1;Name=WP_075672800.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000211225.1;locus_tag=L2557_RS04620;product=peptidylprolyl isomerase;protein_id=WP_075672800.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 18460 19908 . + . ID=gene-L2557_RS04625;Name=L2557_RS04625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04625 NZ_JAIKUA010000054.1 Protein Homology CDS 18460 19908 . + 0 ID=cds-WP_075672799.1;Parent=gene-L2557_RS04625;Dbxref=GenBank:WP_075672799.1;Name=WP_075672799.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000773908.1;locus_tag=L2557_RS04625;product=NAD-dependent succinate-semialdehyde dehydrogenase;protein_id=WP_075672799.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 20127 20774 . - . ID=gene-L2557_RS04630;Name=zinT;gbkey=Gene;gene=zinT;gene_biotype=protein_coding;locus_tag=L2557_RS04630 NZ_JAIKUA010000054.1 Protein Homology CDS 20127 20774 . - 0 ID=cds-WP_075672798.1;Parent=gene-L2557_RS04630;Dbxref=GenBank:WP_075672798.1;Name=WP_075672798.1;Ontology_term=GO:0008270;gbkey=CDS;gene=zinT;go_function=zinc ion binding|0008270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246276.1;locus_tag=L2557_RS04630;product=metal-binding protein ZinT;protein_id=WP_075672798.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 20779 20904 . - . ID=gene-L2557_RS04635;Name=ykgO;gbkey=Gene;gene=ykgO;gene_biotype=protein_coding;locus_tag=L2557_RS04635 NZ_JAIKUA010000054.1 Protein Homology CDS 20779 20904 . - 0 ID=cds-WP_006535739.1;Parent=gene-L2557_RS04635;Dbxref=GenBank:WP_006535739.1;Name=WP_006535739.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=ykgO;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246277.1;locus_tag=L2557_RS04635;product=type B 50S ribosomal protein L36;protein_id=WP_006535739.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 20915 21163 . - . ID=gene-L2557_RS04640;Name=L2557_RS04640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04640 NZ_JAIKUA010000054.1 Protein Homology CDS 20915 21163 . - 0 ID=cds-WP_075672797.1;Parent=gene-L2557_RS04640;Dbxref=GenBank:WP_075672797.1;Name=WP_075672797.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661227.1;locus_tag=L2557_RS04640;product=type B 50S ribosomal protein L31;protein_id=WP_075672797.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 21400 23094 . + . ID=gene-L2557_RS04645;Name=L2557_RS04645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04645 NZ_JAIKUA010000054.1 GeneMarkS-2+ CDS 21400 23094 . + 0 ID=cds-WP_099660279.1;Parent=gene-L2557_RS04645;Dbxref=GenBank:WP_099660279.1;Name=WP_099660279.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS04645;product=hypothetical protein;protein_id=WP_099660279.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 23163 23816 . + . ID=gene-L2557_RS04650;Name=L2557_RS04650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04650 NZ_JAIKUA010000054.1 Protein Homology CDS 23163 23816 . + 0 ID=cds-WP_226891848.1;Parent=gene-L2557_RS04650;Dbxref=GenBank:WP_226891848.1;Name=WP_226891848.1;Ontology_term=GO:0042834;gbkey=CDS;go_function=peptidoglycan binding|0042834||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249623.1;locus_tag=L2557_RS04650;product=LysM-like peptidoglycan-binding domain-containing protein;protein_id=WP_226891848.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 23899 24348 . - . ID=gene-L2557_RS04655;Name=rplI;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=L2557_RS04655 NZ_JAIKUA010000054.1 Protein Homology CDS 23899 24348 . - 0 ID=cds-WP_023583606.1;Parent=gene-L2557_RS04655;Dbxref=GenBank:WP_023583606.1;Name=WP_023583606.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplI;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005134442.1;locus_tag=L2557_RS04655;product=50S ribosomal protein L9;protein_id=WP_023583606.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 24389 24616 . - . ID=gene-L2557_RS04660;Name=rpsR;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=L2557_RS04660 NZ_JAIKUA010000054.1 Protein Homology CDS 24389 24616 . - 0 ID=cds-WP_000135199.1;Parent=gene-L2557_RS04660;Dbxref=GenBank:WP_000135199.1;Name=WP_000135199.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsR;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012986941.1;locus_tag=L2557_RS04660;product=30S ribosomal protein S18;protein_id=WP_000135199.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 24621 24941 . - . ID=gene-L2557_RS04665;Name=priB;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=L2557_RS04665 NZ_JAIKUA010000054.1 Protein Homology CDS 24621 24941 . - 0 ID=cds-WP_006535746.1;Parent=gene-L2557_RS04665;Dbxref=GenBank:WP_006535746.1;Name=WP_006535746.1;Ontology_term=GO:0006260,GO:0003697,GO:0030894;gbkey=CDS;gene=priB;go_component=replisome|0030894||IEA;go_function=single-stranded DNA binding|0003697||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535746.1;locus_tag=L2557_RS04665;product=primosomal replication protein N;protein_id=WP_006535746.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 24950 25348 . - . ID=gene-L2557_RS04670;Name=rpsF;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=L2557_RS04670 NZ_JAIKUA010000054.1 Protein Homology CDS 24950 25348 . - 0 ID=cds-WP_075672794.1;Parent=gene-L2557_RS04670;Dbxref=GenBank:WP_075672794.1;Name=WP_075672794.1;Ontology_term=GO:0006412,GO:0003735,GO:0000314,GO:0022627;gbkey=CDS;gene=rpsF;go_component=organellar small ribosomal subunit|0000314||IEA,cytosolic small ribosomal subunit|0022627||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_020456251.1;locus_tag=L2557_RS04670;product=30S ribosomal protein S6;protein_id=WP_075672794.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 25512 26243 . - . ID=gene-L2557_RS04675;Name=rlmB;gbkey=Gene;gene=rlmB;gene_biotype=protein_coding;locus_tag=L2557_RS04675 NZ_JAIKUA010000054.1 Protein Homology CDS 25512 26243 . - 0 ID=cds-WP_164530220.1;Parent=gene-L2557_RS04675;Dbxref=GenBank:WP_164530220.1;Name=WP_164530220.1;Ontology_term=GO:0006396,GO:0003723,GO:0008173;gbkey=CDS;gene=rlmB;go_function=RNA binding|0003723||IEA,RNA methyltransferase activity|0008173||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249624.1;locus_tag=L2557_RS04675;product=23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB;protein_id=WP_164530220.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 26345 28840 . - . ID=gene-L2557_RS04680;Name=rnr;gbkey=Gene;gene=rnr;gene_biotype=protein_coding;locus_tag=L2557_RS04680 NZ_JAIKUA010000054.1 Protein Homology CDS 26345 28840 . - 0 ID=cds-WP_099660281.1;Parent=gene-L2557_RS04680;Dbxref=GenBank:WP_099660281.1;Name=WP_099660281.1;Ontology_term=GO:0016070,GO:0004540;gbkey=CDS;gene=rnr;go_function=RNA nuclease activity|0004540||IEA;go_process=RNA metabolic process|0016070||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253030.1;locus_tag=L2557_RS04680;product=ribonuclease R;protein_id=WP_099660281.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 28880 29308 . - . ID=gene-L2557_RS04685;Name=nsrR;gbkey=Gene;gene=nsrR;gene_biotype=protein_coding;locus_tag=L2557_RS04685 NZ_JAIKUA010000054.1 Protein Homology CDS 28880 29308 . - 0 ID=cds-WP_036914714.1;Parent=gene-L2557_RS04685;Dbxref=GenBank:WP_036914714.1;Name=WP_036914714.1;gbkey=CDS;gene=nsrR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249627.1;locus_tag=L2557_RS04685;product=nitric oxide-sensing transcriptional repressor NsrR;protein_id=WP_036914714.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 29737 31035 . - . ID=gene-L2557_RS04690;Name=L2557_RS04690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04690 NZ_JAIKUA010000054.1 Protein Homology CDS 29737 31035 . - 0 ID=cds-WP_072069601.1;Parent=gene-L2557_RS04690;Dbxref=GenBank:WP_072069601.1;Name=WP_072069601.1;Ontology_term=GO:0006164,GO:0004019,GO:0005525;gbkey=CDS;go_function=adenylosuccinate synthase activity|0004019||IEA,GTP binding|0005525||IEA;go_process=purine nucleotide biosynthetic process|0006164||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313180.1;locus_tag=L2557_RS04690;product=adenylosuccinate synthase;protein_id=WP_072069601.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 31138 31308 . - . ID=gene-L2557_RS04695;Name=L2557_RS04695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04695 NZ_JAIKUA010000054.1 Protein Homology CDS 31138 31308 . - 0 ID=cds-WP_164530206.1;Parent=gene-L2557_RS04695;Dbxref=GenBank:WP_164530206.1;Name=WP_164530206.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368718.1;locus_tag=L2557_RS04695;product=hypothetical protein;protein_id=WP_164530206.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 31493 32497 . - . ID=gene-L2557_RS04700;Name=hflC;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=L2557_RS04700 NZ_JAIKUA010000054.1 Protein Homology CDS 31493 32497 . - 0 ID=cds-WP_075672791.1;Parent=gene-L2557_RS04700;Dbxref=GenBank:WP_075672791.1;Name=WP_075672791.1;gbkey=CDS;gene=hflC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246288.1;locus_tag=L2557_RS04700;product=protease modulator HflC;protein_id=WP_075672791.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 32500 33774 . - . ID=gene-L2557_RS04705;Name=hflK;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=L2557_RS04705 NZ_JAIKUA010000054.1 Protein Homology CDS 32500 33774 . - 0 ID=cds-WP_099660283.1;Parent=gene-L2557_RS04705;Dbxref=GenBank:WP_099660283.1;Name=WP_099660283.1;Ontology_term=GO:0045861,GO:0016020;gbkey=CDS;gene=hflK;go_component=membrane|0016020||IEA;go_process=negative regulation of proteolysis|0045861||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368717.1;locus_tag=L2557_RS04705;product=FtsH protease activity modulator HflK;protein_id=WP_099660283.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 33867 35150 . - . ID=gene-L2557_RS04710;Name=hflX;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=L2557_RS04710 NZ_JAIKUA010000054.1 Protein Homology CDS 33867 35150 . - 0 ID=cds-WP_075672789.1;Parent=gene-L2557_RS04710;Dbxref=GenBank:WP_075672789.1;Name=WP_075672789.1;Ontology_term=GO:0005525;gbkey=CDS;gene=hflX;go_function=GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253031.1;locus_tag=L2557_RS04710;product=ribosome rescue GTPase HflX;protein_id=WP_075672789.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 35245 35532 . - . ID=gene-L2557_RS04715;Name=hfq;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=L2557_RS04715 NZ_JAIKUA010000054.1 Protein Homology CDS 35245 35532 . - 0 ID=cds-WP_075672788.1;Parent=gene-L2557_RS04715;Dbxref=GenBank:WP_075672788.1;Name=WP_075672788.1;Ontology_term=GO:0006355,GO:0003723;gbkey=CDS;gene=hfq;go_function=RNA binding|0003723||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246291.1;locus_tag=L2557_RS04715;product=RNA chaperone Hfq;protein_id=WP_075672788.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 35642 36583 . - . ID=gene-L2557_RS04720;Name=miaA;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=L2557_RS04720 NZ_JAIKUA010000054.1 Protein Homology CDS 35642 36583 . - 0 ID=cds-WP_099660284.1;Parent=gene-L2557_RS04720;Dbxref=GenBank:WP_099660284.1;Name=WP_099660284.1;Ontology_term=GO:0006400,GO:0052381,GO:0005737;gbkey=CDS;gene=miaA;go_component=cytoplasm|0005737||IEA;go_function=tRNA dimethylallyltransferase activity|0052381||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246293.1;locus_tag=L2557_RS04720;product=tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA;protein_id=WP_099660284.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 36552 38564 . - . ID=gene-L2557_RS04725;Name=mutL;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=L2557_RS04725 NZ_JAIKUA010000054.1 Protein Homology CDS 36552 38564 . - 0 ID=cds-WP_099660285.1;Parent=gene-L2557_RS04725;Dbxref=GenBank:WP_099660285.1;Name=WP_099660285.1;Ontology_term=GO:0006298,GO:0005524,GO:0016887,GO:0030983,GO:0032300;gbkey=CDS;gene=mutL;go_component=mismatch repair complex|0032300||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,mismatched DNA binding|0030983||IEA;go_process=mismatch repair|0006298||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535763.1;locus_tag=L2557_RS04725;product=DNA mismatch repair endonuclease MutL;protein_id=WP_099660285.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 38588 39916 . - . ID=gene-L2557_RS04730;Name=L2557_RS04730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04730 NZ_JAIKUA010000054.1 Protein Homology CDS 38588 39916 . - 0 ID=cds-WP_099660286.1;Parent=gene-L2557_RS04730;Dbxref=GenBank:WP_099660286.1;Name=WP_099660286.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253037.1;locus_tag=L2557_RS04730;product=N-acetylmuramoyl-L-alanine amidase;protein_id=WP_099660286.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 39930 40397 . - . ID=gene-L2557_RS04735;Name=tsaE;gbkey=Gene;gene=tsaE;gene_biotype=protein_coding;locus_tag=L2557_RS04735 NZ_JAIKUA010000054.1 Protein Homology CDS 39930 40397 . - 0 ID=cds-WP_075672785.1;Parent=gene-L2557_RS04735;Dbxref=GenBank:WP_075672785.1;Name=WP_075672785.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaE;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249636.1;locus_tag=L2557_RS04735;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE;protein_id=WP_075672785.1;transl_table=11 NZ_JAIKUA010000054.1 RefSeq gene 40623 41777 . + . ID=gene-L2557_RS04740;Name=queG;gbkey=Gene;gene=queG;gene_biotype=protein_coding;locus_tag=L2557_RS04740 NZ_JAIKUA010000054.1 Protein Homology CDS 40623 41777 . + 0 ID=cds-WP_156732988.1;Parent=gene-L2557_RS04740;Dbxref=GenBank:WP_156732988.1;Name=WP_156732988.1;Ontology_term=GO:0008033,GO:0008616,GO:0051539,GO:0052693;gbkey=CDS;gene=queG;go_function=4 iron%2C 4 sulfur cluster binding|0051539||IEA,epoxyqueuosine reductase activity|0052693||IEA;go_process=tRNA processing|0008033||IEA,tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368714.1;locus_tag=L2557_RS04740;product=tRNA epoxyqueuosine(34) reductase QueG;protein_id=WP_156732988.1;transl_table=11 ##sequence-region NZ_JAIKUA010000055.1 1 25762 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000055.1 RefSeq region 1 25762 . + . ID=NZ_JAIKUA010000055.1:1..25762;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000055.1 RefSeq gene 227 883 . - . ID=gene-L2557_RS04745;Name=flgA;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=L2557_RS04745 NZ_JAIKUA010000055.1 Protein Homology CDS 227 883 . - 0 ID=cds-WP_075673035.1;Parent=gene-L2557_RS04745;Dbxref=GenBank:WP_075673035.1;Name=WP_075673035.1;Ontology_term=GO:0001539,GO:0005198,GO:0009428;gbkey=CDS;gene=flgA;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243539.1;locus_tag=L2557_RS04745;product=flagellar basal body P-ring formation chaperone FlgA;protein_id=WP_075673035.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 1093 1503 . + . ID=gene-L2557_RS04750;Name=flgB;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=L2557_RS04750 NZ_JAIKUA010000055.1 Protein Homology CDS 1093 1503 . + 0 ID=cds-WP_075673034.1;Parent=gene-L2557_RS04750;Dbxref=GenBank:WP_075673034.1;Name=WP_075673034.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgB;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533174.1;locus_tag=L2557_RS04750;product=flagellar basal body rod protein FlgB;protein_id=WP_075673034.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 1514 1918 . + . ID=gene-L2557_RS04755;Name=flgC;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=L2557_RS04755 NZ_JAIKUA010000055.1 Protein Homology CDS 1514 1918 . + 0 ID=cds-WP_023581815.1;Parent=gene-L2557_RS04755;Dbxref=GenBank:WP_023581815.1;Name=WP_023581815.1;Ontology_term=GO:0071973,GO:0030694;gbkey=CDS;gene=flgC;go_component=bacterial-type flagellum basal body%2C rod|0030694||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211111.1;locus_tag=L2557_RS04755;product=flagellar basal body rod protein FlgC;protein_id=WP_023581815.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 1931 2761 . + . ID=gene-L2557_RS04760;Name=L2557_RS04760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04760 NZ_JAIKUA010000055.1 Protein Homology CDS 1931 2761 . + 0 ID=cds-WP_099660623.1;Parent=gene-L2557_RS04760;Dbxref=GenBank:WP_099660623.1;Name=WP_099660623.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368059.1;locus_tag=L2557_RS04760;product=flagellar hook assembly protein FlgD;protein_id=WP_099660623.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 2789 4015 . + . ID=gene-L2557_RS04765;Name=flgE;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=L2557_RS04765 NZ_JAIKUA010000055.1 Protein Homology CDS 2789 4015 . + 0 ID=cds-WP_099660622.1;Parent=gene-L2557_RS04765;Dbxref=GenBank:WP_099660622.1;Name=WP_099660622.1;gbkey=CDS;gene=flgE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004934822.1;locus_tag=L2557_RS04765;product=flagellar hook protein FlgE;protein_id=WP_099660622.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 4037 4792 . + . ID=gene-L2557_RS04770;Name=L2557_RS04770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04770 NZ_JAIKUA010000055.1 Protein Homology CDS 4037 4792 . + 0 ID=cds-WP_075673031.1;Parent=gene-L2557_RS04770;Dbxref=GenBank:WP_075673031.1;Name=WP_075673031.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243534.1;locus_tag=L2557_RS04770;product=flagellar basal body rod protein FlgF;protein_id=WP_075673031.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 4812 5594 . + . ID=gene-L2557_RS04775;Name=flgG;gbkey=Gene;gene=flgG;gene_biotype=protein_coding;locus_tag=L2557_RS04775 NZ_JAIKUA010000055.1 Protein Homology CDS 4812 5594 . + 0 ID=cds-WP_036935743.1;Parent=gene-L2557_RS04775;Dbxref=GenBank:WP_036935743.1;Name=WP_036935743.1;Ontology_term=GO:0071973,GO:0009426;gbkey=CDS;gene=flgG;go_component=bacterial-type flagellum basal body%2C distal rod|0009426||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_460150.1;locus_tag=L2557_RS04775;product=flagellar basal-body rod protein FlgG;protein_id=WP_036935743.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 5658 6401 . + . ID=gene-L2557_RS04780;Name=L2557_RS04780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04780 NZ_JAIKUA010000055.1 Protein Homology CDS 5658 6401 . + 0 ID=cds-WP_075673030.1;Parent=gene-L2557_RS04780;Dbxref=GenBank:WP_075673030.1;Name=WP_075673030.1;Ontology_term=GO:0071973,GO:0003774,GO:0009427;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C L ring|0009427||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368058.1;locus_tag=L2557_RS04780;product=flagellar basal body L-ring protein FlgH;protein_id=WP_075673030.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 6416 7522 . + . ID=gene-L2557_RS04785;Name=L2557_RS04785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04785 NZ_JAIKUA010000055.1 Protein Homology CDS 6416 7522 . + 0 ID=cds-WP_235409868.1;Parent=gene-L2557_RS04785;Dbxref=GenBank:WP_235409868.1;Name=WP_235409868.1;Ontology_term=GO:0071973,GO:0005198,GO:0009428,GO:0030288;gbkey=CDS;go_component=bacterial-type flagellum basal body%2C distal rod%2C P ring|0009428||IEA,outer membrane-bounded periplasmic space|0030288||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250775.1;locus_tag=L2557_RS04785;product=flagellar basal body P-ring protein FlgI;protein_id=WP_235409868.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 7522 8508 . + . ID=gene-L2557_RS04790;Name=flgJ;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=L2557_RS04790 NZ_JAIKUA010000055.1 Protein Homology CDS 7522 8508 . + 0 ID=cds-WP_109418912.1;Parent=gene-L2557_RS04790;Dbxref=GenBank:WP_109418912.1;Name=WP_109418912.1;Ontology_term=GO:0044780,GO:0016798;gbkey=CDS;gene=flgJ;go_function=hydrolase activity%2C acting on glycosyl bonds|0016798||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243530.1;locus_tag=L2557_RS04790;product=flagellar assembly peptidoglycan hydrolase FlgJ;protein_id=WP_109418912.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 8627 10270 . + . ID=gene-L2557_RS04795;Name=flgK;gbkey=Gene;gene=flgK;gene_biotype=protein_coding;locus_tag=L2557_RS04795 NZ_JAIKUA010000055.1 Protein Homology CDS 8627 10270 . + 0 ID=cds-WP_075673027.1;Parent=gene-L2557_RS04795;Dbxref=GenBank:WP_075673027.1;Name=WP_075673027.1;Ontology_term=GO:0044780,GO:0005198,GO:0009424;gbkey=CDS;gene=flgK;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628023.1;locus_tag=L2557_RS04795;product=flagellar hook-associated protein FlgK;protein_id=WP_075673027.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 10295 11239 . + . ID=gene-L2557_RS04800;Name=flgL;gbkey=Gene;gene=flgL;gene_biotype=protein_coding;locus_tag=L2557_RS04800 NZ_JAIKUA010000055.1 Protein Homology CDS 10295 11239 . + 0 ID=cds-WP_099660620.1;Parent=gene-L2557_RS04800;Dbxref=GenBank:WP_099660620.1;Name=WP_099660620.1;Ontology_term=GO:0001539,GO:0005198,GO:0009424;gbkey=CDS;gene=flgL;go_component=bacterial-type flagellum hook|0009424||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243527.1;locus_tag=L2557_RS04800;product=flagellar hook-associated protein FlgL;protein_id=WP_099660620.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 11325 11816 . - . ID=gene-L2557_RS04805;Name=L2557_RS04805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04805 NZ_JAIKUA010000055.1 Protein Homology CDS 11325 11816 . - 0 ID=cds-WP_075673025.1;Parent=gene-L2557_RS04805;Dbxref=GenBank:WP_075673025.1;Name=WP_075673025.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006810665.1;locus_tag=L2557_RS04805;product=GNAT family N-acetyltransferase;protein_id=WP_075673025.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 11804 12070 . - . ID=gene-L2557_RS04810;Name=L2557_RS04810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04810 NZ_JAIKUA010000055.1 Protein Homology CDS 11804 12070 . - 0 ID=cds-WP_075673024.1;Parent=gene-L2557_RS04810;Dbxref=GenBank:WP_075673024.1;Name=WP_075673024.1;Ontology_term=GO:0006355,GO:0110001;gbkey=CDS;go_component=toxin-antitoxin complex|0110001||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006710107.1;locus_tag=L2557_RS04810;product=type II toxin-antitoxin system TacA family antitoxin;protein_id=WP_075673024.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 12194 12976 . - . ID=gene-L2557_RS04815;Name=fliR;gbkey=Gene;gene=fliR;gene_biotype=protein_coding;locus_tag=L2557_RS04815 NZ_JAIKUA010000055.1 Protein Homology CDS 12194 12976 . - 0 ID=cds-WP_075673023.1;Parent=gene-L2557_RS04815;Dbxref=GenBank:WP_075673023.1;Name=WP_075673023.1;Ontology_term=GO:0006605,GO:0044780,GO:0016020;gbkey=CDS;gene=fliR;go_component=membrane|0016020||IEA;go_process=protein targeting|0006605||IEA,bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211130.1;locus_tag=L2557_RS04815;product=flagellar biosynthetic protein FliR;protein_id=WP_075673023.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 12982 13251 . - . ID=gene-L2557_RS04820;Name=fliQ;gbkey=Gene;gene=fliQ;gene_biotype=protein_coding;locus_tag=L2557_RS04820 NZ_JAIKUA010000055.1 Protein Homology CDS 12982 13251 . - 0 ID=cds-WP_069367481.1;Parent=gene-L2557_RS04820;Dbxref=GenBank:WP_069367481.1;Name=WP_069367481.1;Ontology_term=GO:0044780,GO:0016020;gbkey=CDS;gene=fliQ;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211131.1;locus_tag=L2557_RS04820;product=flagellar biosynthesis protein FliQ;protein_id=WP_069367481.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 13267 14037 . - . ID=gene-L2557_RS04825;Name=fliP;gbkey=Gene;gene=fliP;gene_biotype=protein_coding;locus_tag=L2557_RS04825 NZ_JAIKUA010000055.1 Protein Homology CDS 13267 14037 . - 0 ID=cds-WP_023581828.1;Parent=gene-L2557_RS04825;Dbxref=GenBank:WP_023581828.1;Name=WP_023581828.1;Note=The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly.;Ontology_term=GO:0009306,GO:0016020;gbkey=CDS;gene=fliP;go_component=membrane|0016020||IEA;go_process=protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248331.1;locus_tag=L2557_RS04825;product=flagellar type III secretion system pore protein FliP;protein_id=WP_023581828.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 14037 14483 . - . ID=gene-L2557_RS04830;Name=fliO;gbkey=Gene;gene=fliO;gene_biotype=protein_coding;locus_tag=L2557_RS04830 NZ_JAIKUA010000055.1 Protein Homology CDS 14037 14483 . - 0 ID=cds-WP_075673022.1;Parent=gene-L2557_RS04830;Dbxref=GenBank:WP_075673022.1;Name=WP_075673022.1;Ontology_term=GO:0044781,GO:0016020;gbkey=CDS;gene=fliO;go_component=membrane|0016020||IEA;go_process=bacterial-type flagellum organization|0044781||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243522.1;locus_tag=L2557_RS04830;product=flagellar biosynthetic protein FliO;protein_id=WP_075673022.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 14487 14897 . - . ID=gene-L2557_RS04835;Name=fliN;gbkey=Gene;gene=fliN;gene_biotype=protein_coding;locus_tag=L2557_RS04835 NZ_JAIKUA010000055.1 Protein Homology CDS 14487 14897 . - 0 ID=cds-WP_006533153.1;Parent=gene-L2557_RS04835;Dbxref=GenBank:WP_006533153.1;Name=WP_006533153.1;Ontology_term=GO:0001539,GO:0003774,GO:0009288,GO:0016020;gbkey=CDS;gene=fliN;go_component=bacterial-type flagellum|0009288||IEA,membrane|0016020||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243521.1;locus_tag=L2557_RS04835;product=flagellar motor switch protein FliN;protein_id=WP_006533153.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 14890 15921 . - . ID=gene-L2557_RS04840;Name=fliM;gbkey=Gene;gene=fliM;gene_biotype=protein_coding;locus_tag=L2557_RS04840 NZ_JAIKUA010000055.1 Protein Homology CDS 14890 15921 . - 0 ID=cds-WP_023581831.1;Parent=gene-L2557_RS04840;Dbxref=GenBank:WP_023581831.1;Name=WP_023581831.1;Ontology_term=GO:0001539,GO:0009288;gbkey=CDS;gene=fliM;go_component=bacterial-type flagellum|0009288||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004700939.1;locus_tag=L2557_RS04840;product=flagellar motor switch protein FliM;protein_id=WP_023581831.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 15927 16409 . - . ID=gene-L2557_RS04845;Name=fliL;gbkey=Gene;gene=fliL;gene_biotype=protein_coding;locus_tag=L2557_RS04845 NZ_JAIKUA010000055.1 Protein Homology CDS 15927 16409 . - 0 ID=cds-WP_006533151.1;Parent=gene-L2557_RS04845;Dbxref=GenBank:WP_006533151.1;Name=WP_006533151.1;Ontology_term=GO:0006935,GO:0071973,GO:0009425;gbkey=CDS;gene=fliL;go_component=bacterial-type flagellum basal body|0009425||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243519.1;locus_tag=L2557_RS04845;product=flagellar basal body-associated protein FliL;protein_id=WP_006533151.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 16587 17990 . - . ID=gene-L2557_RS04850;Name=L2557_RS04850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04850 NZ_JAIKUA010000055.1 Protein Homology CDS 16587 17990 . - 0 ID=cds-WP_219410333.1;Parent=gene-L2557_RS04850;Dbxref=GenBank:WP_219410333.1;Name=WP_219410333.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533150.1;locus_tag=L2557_RS04850;product=flagellar hook-length control protein FliK;protein_id=WP_219410333.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 17990 18436 . - . ID=gene-L2557_RS04855;Name=fliJ;gbkey=Gene;gene=fliJ;gene_biotype=protein_coding;locus_tag=L2557_RS04855 NZ_JAIKUA010000055.1 Protein Homology CDS 17990 18436 . - 0 ID=cds-WP_006533149.1;Parent=gene-L2557_RS04855;Dbxref=GenBank:WP_006533149.1;Name=WP_006533149.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliJ;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533149.1;locus_tag=L2557_RS04855;product=flagellar export protein FliJ;protein_id=WP_006533149.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 18473 19840 . - . ID=gene-L2557_RS04860;Name=fliI;gbkey=Gene;gene=fliI;gene_biotype=protein_coding;locus_tag=L2557_RS04860 NZ_JAIKUA010000055.1 Protein Homology CDS 18473 19840 . - 0 ID=cds-WP_075673020.1;Parent=gene-L2557_RS04860;Dbxref=GenBank:WP_075673020.1;Name=WP_075673020.1;Ontology_term=GO:0044780,GO:0071973,GO:0016887;gbkey=CDS;gene=fliI;go_function=ATP hydrolysis activity|0016887||IEA;go_process=bacterial-type flagellum assembly|0044780||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533148.1;locus_tag=L2557_RS04860;product=flagellar protein export ATPase FliI;protein_id=WP_075673020.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 19840 20559 . - . ID=gene-L2557_RS04865;Name=fliH;gbkey=Gene;gene=fliH;gene_biotype=protein_coding;locus_tag=L2557_RS04865 NZ_JAIKUA010000055.1 Protein Homology CDS 19840 20559 . - 0 ID=cds-WP_023581834.1;Parent=gene-L2557_RS04865;Dbxref=GenBank:WP_023581834.1;Name=WP_023581834.1;Ontology_term=GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliH;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250784.1;locus_tag=L2557_RS04865;product=flagellar assembly protein FliH;protein_id=WP_023581834.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 20552 21550 . - . ID=gene-L2557_RS04870;Name=fliG;gbkey=Gene;gene=fliG;gene_biotype=protein_coding;locus_tag=L2557_RS04870 NZ_JAIKUA010000055.1 Protein Homology CDS 20552 21550 . - 0 ID=cds-WP_023581835.1;Parent=gene-L2557_RS04870;Dbxref=GenBank:WP_023581835.1;Name=WP_023581835.1;Ontology_term=GO:0006935,GO:0071973,GO:0003774,GO:0009288;gbkey=CDS;gene=fliG;go_component=bacterial-type flagellum|0009288||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=chemotaxis|0006935||IEA,bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012131907.1;locus_tag=L2557_RS04870;product=flagellar motor switch protein FliG;protein_id=WP_023581835.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 21547 23280 . - . ID=gene-L2557_RS04875;Name=fliF;gbkey=Gene;gene=fliF;gene_biotype=protein_coding;locus_tag=L2557_RS04875 NZ_JAIKUA010000055.1 Protein Homology CDS 21547 23280 . - 0 ID=cds-WP_075673019.1;Parent=gene-L2557_RS04875;Dbxref=GenBank:WP_075673019.1;Name=WP_075673019.1;Ontology_term=GO:0001539,GO:0005198,GO:0009431;gbkey=CDS;gene=fliF;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=structural molecule activity|0005198||IEA;go_process=cilium or flagellum-dependent cell motility|0001539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368055.1;locus_tag=L2557_RS04875;product=flagellar basal-body MS-ring/collar protein FliF;protein_id=WP_075673019.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 23557 23868 . + . ID=gene-L2557_RS04880;Name=fliE;gbkey=Gene;gene=fliE;gene_biotype=protein_coding;locus_tag=L2557_RS04880 NZ_JAIKUA010000055.1 Protein Homology CDS 23557 23868 . + 0 ID=cds-WP_072068509.1;Parent=gene-L2557_RS04880;Dbxref=GenBank:WP_072068509.1;Name=WP_072068509.1;Ontology_term=GO:0071973,GO:0003774,GO:0009431;gbkey=CDS;gene=fliE;go_component=bacterial-type flagellum basal body%2C MS ring|0009431||IEA;go_function=cytoskeletal motor activity|0003774||IEA;go_process=bacterial-type flagellum-dependent cell motility|0071973||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005160376.1;locus_tag=L2557_RS04880;product=flagellar hook-basal body complex protein FliE;protein_id=WP_072068509.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 24301 24471 . + . ID=gene-L2557_RS04885;Name=L2557_RS04885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04885 NZ_JAIKUA010000055.1 Protein Homology CDS 24301 24471 . + 0 ID=cds-WP_083629098.1;Parent=gene-L2557_RS04885;Dbxref=GenBank:WP_083629098.1;Name=WP_083629098.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF023095.6;locus_tag=L2557_RS04885;product=DUF2933 domain-containing protein;protein_id=WP_083629098.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 24732 25070 . + . ID=gene-L2557_RS04890;Name=L2557_RS04890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04890 NZ_JAIKUA010000055.1 Protein Homology CDS 24732 25070 . + 0 ID=cds-WP_171455316.1;Parent=gene-L2557_RS04890;Dbxref=GenBank:WP_171455316.1;Name=WP_171455316.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004927953.1;locus_tag=L2557_RS04890;product=GlpM family protein;protein_id=WP_171455316.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 25125 25355 . + . ID=gene-L2557_RS04895;Name=L2557_RS04895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04895 NZ_JAIKUA010000055.1 Protein Homology CDS 25125 25355 . + 0 ID=cds-WP_075673047.1;Parent=gene-L2557_RS04895;Dbxref=GenBank:WP_075673047.1;Name=WP_075673047.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250790.1;locus_tag=L2557_RS04895;product=DUF6500 family protein;protein_id=WP_075673047.1;transl_table=11 NZ_JAIKUA010000055.1 RefSeq gene 25460 25675 . + . ID=gene-L2557_RS04900;Name=L2557_RS04900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04900 NZ_JAIKUA010000055.1 Protein Homology CDS 25460 25675 . + 0 ID=cds-WP_023581839.1;Parent=gene-L2557_RS04900;Dbxref=GenBank:WP_023581839.1;Name=WP_023581839.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533140.1;locus_tag=L2557_RS04900;product=hypothetical protein;protein_id=WP_023581839.1;transl_table=11 ##sequence-region NZ_JAIKUA010000056.1 1 37061 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000056.1 RefSeq region 1 37061 . + . ID=NZ_JAIKUA010000056.1:1..37061;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000056.1 RefSeq pseudogene 185 1406 . - . ID=gene-L2557_RS04905;Name=L2557_RS04905;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS04905;pseudo=true NZ_JAIKUA010000056.1 Protein Homology CDS 185 1406 . - 0 ID=cds-L2557_RS04905;Parent=gene-L2557_RS04905;Note=programmed frameshift%3B internal stop;Ontology_term=GO:0004803;gbkey=CDS;go_function=transposase activity|0004803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_076612166.1;locus_tag=L2557_RS04905;product=IS3 family transposase;pseudo=true;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 1730 4663 . - . ID=gene-L2557_RS04910;Name=L2557_RS04910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04910 NZ_JAIKUA010000056.1 Protein Homology CDS 1730 4663 . - 0 ID=cds-WP_235409870.1;Parent=gene-L2557_RS04910;Dbxref=GenBank:WP_235409870.1;Name=WP_235409870.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247066.1;locus_tag=L2557_RS04910;product=autotransporter domain-containing protein;protein_id=WP_235409870.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 4985 6634 . - . ID=gene-L2557_RS04915;Name=L2557_RS04915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04915 NZ_JAIKUA010000056.1 Protein Homology CDS 4985 6634 . - 0 ID=cds-WP_099659567.1;Parent=gene-L2557_RS04915;Dbxref=GenBank:WP_099659567.1;Name=WP_099659567.1;Ontology_term=GO:0016831,GO:0030976,GO:0046872;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA,thiamine pyrophosphate binding|0030976||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628389.1;locus_tag=L2557_RS04915;product=alpha-keto acid decarboxylase family protein;protein_id=WP_099659567.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 6783 7670 . + . ID=gene-L2557_RS04920;Name=L2557_RS04920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04920 NZ_JAIKUA010000056.1 Protein Homology CDS 6783 7670 . + 0 ID=cds-WP_099659568.1;Parent=gene-L2557_RS04920;Dbxref=GenBank:WP_099659568.1;Name=WP_099659568.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004919341.1;locus_tag=L2557_RS04920;product=LysR family transcriptional regulator;protein_id=WP_099659568.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 7901 9661 . + . ID=gene-L2557_RS04925;Name=dld;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=L2557_RS04925 NZ_JAIKUA010000056.1 Protein Homology CDS 7901 9661 . + 0 ID=cds-WP_156733268.1;Parent=gene-L2557_RS04925;Dbxref=GenBank:WP_156733268.1;Name=WP_156733268.1;Ontology_term=GO:0006089,GO:0016901;gbkey=CDS;gene=dld;go_function=oxidoreductase activity%2C acting on the CH-OH group of donors%2C quinone or similar compound as acceptor|0016901||IEA;go_process=lactate metabolic process|0006089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827313.1;locus_tag=L2557_RS04925;product=D-lactate dehydrogenase;protein_id=WP_156733268.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 9728 11158 . - . ID=gene-L2557_RS04930;Name=sbcB;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=L2557_RS04930 NZ_JAIKUA010000056.1 Protein Homology CDS 9728 11158 . - 0 ID=cds-WP_075673170.1;Parent=gene-L2557_RS04930;Dbxref=GenBank:WP_075673170.1;Name=WP_075673170.1;Ontology_term=GO:0006281,GO:0000175,GO:0003676,GO:0008310;gbkey=CDS;gene=sbcB;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA,single-stranded DNA 3'-5' DNA exonuclease activity|0008310||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247071.1;locus_tag=L2557_RS04930;product=exodeoxyribonuclease I;protein_id=WP_075673170.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 11425 11835 . - . ID=gene-L2557_RS04935;Name=L2557_RS04935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04935 NZ_JAIKUA010000056.1 Protein Homology CDS 11425 11835 . - 0 ID=cds-WP_075673171.1;Parent=gene-L2557_RS04935;Dbxref=GenBank:WP_075673171.1;Name=WP_075673171.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014839980.1;locus_tag=L2557_RS04935;product=VOC family protein;protein_id=WP_075673171.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 12089 13351 . + . ID=gene-L2557_RS04940;Name=L2557_RS04940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04940 NZ_JAIKUA010000056.1 Protein Homology CDS 12089 13351 . + 0 ID=cds-WP_075673172.1;Parent=gene-L2557_RS04940;Dbxref=GenBank:WP_075673172.1;Name=WP_075673172.1;Ontology_term=GO:0008643,GO:0005351,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=carbohydrate:proton symporter activity|0005351||IEA;go_process=carbohydrate transport|0008643||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251857.1;locus_tag=L2557_RS04940;product=MFS transporter;protein_id=WP_075673172.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 13608 13946 . + . ID=gene-L2557_RS04945;Name=tmaR;gbkey=Gene;gene=tmaR;gene_biotype=protein_coding;locus_tag=L2557_RS04945 NZ_JAIKUA010000056.1 Protein Homology CDS 13608 13946 . + 0 ID=cds-WP_006537261.1;Parent=gene-L2557_RS04945;Dbxref=GenBank:WP_006537261.1;Name=WP_006537261.1;gbkey=CDS;gene=tmaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247073.1;locus_tag=L2557_RS04945;product=PTS system regulator TmaR;protein_id=WP_006537261.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 14119 17556 . - . ID=gene-L2557_RS04950;Name=rne;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=L2557_RS04950 NZ_JAIKUA010000056.1 Protein Homology CDS 14119 17556 . - 0 ID=cds-WP_235409872.1;Parent=gene-L2557_RS04950;Dbxref=GenBank:WP_235409872.1;Name=WP_235409872.1;Ontology_term=GO:0006396,GO:0003723,GO:0008995;gbkey=CDS;gene=rne;go_function=RNA binding|0003723||IEA,ribonuclease E activity|0008995||IEA;go_process=RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247819.1;locus_tag=L2557_RS04950;product=ribonuclease E;protein_id=WP_235409872.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 18088 19041 . + . ID=gene-L2557_RS04955;Name=rluC;gbkey=Gene;gene=rluC;gene_biotype=protein_coding;locus_tag=L2557_RS04955 NZ_JAIKUA010000056.1 Protein Homology CDS 18088 19041 . + 0 ID=cds-WP_235409873.1;Parent=gene-L2557_RS04955;Dbxref=GenBank:WP_235409873.1;Name=WP_235409873.1;Ontology_term=GO:0001522,GO:0003723,GO:0009982;gbkey=CDS;gene=rluC;go_function=RNA binding|0003723||IEA,pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247076.1;locus_tag=L2557_RS04955;product=23S rRNA pseudouridine(955/2504/2580) synthase RluC;protein_id=WP_235409873.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 19147 19548 . - . ID=gene-L2557_RS04960;Name=L2557_RS04960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04960 NZ_JAIKUA010000056.1 Protein Homology CDS 19147 19548 . - 0 ID=cds-WP_075673176.1;Parent=gene-L2557_RS04960;Dbxref=GenBank:WP_075673176.1;Name=WP_075673176.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537255.1;locus_tag=L2557_RS04960;product=hypothetical protein;protein_id=WP_075673176.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 19595 20194 . - . ID=gene-L2557_RS04965;Name=L2557_RS04965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04965 NZ_JAIKUA010000056.1 Protein Homology CDS 19595 20194 . - 0 ID=cds-WP_075673177.1;Parent=gene-L2557_RS04965;Dbxref=GenBank:WP_075673177.1;Name=WP_075673177.1;Ontology_term=GO:0009117,GO:0009146,GO:0000166,GO:0047429;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleoside triphosphate diphosphatase activity|0047429||IEA;go_process=nucleotide metabolic process|0009117||IEA,purine nucleoside triphosphate catabolic process|0009146||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247078.1;locus_tag=L2557_RS04965;product=Maf family protein;protein_id=WP_075673177.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 20336 20869 . + . ID=gene-L2557_RS04970;Name=yceD;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=L2557_RS04970 NZ_JAIKUA010000056.1 Protein Homology CDS 20336 20869 . + 0 ID=cds-WP_036937758.1;Parent=gene-L2557_RS04970;Dbxref=GenBank:WP_036937758.1;Name=WP_036937758.1;gbkey=CDS;gene=yceD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005183233.1;locus_tag=L2557_RS04970;product=23S rRNA accumulation protein YceD;protein_id=WP_036937758.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 20875 21045 . + . ID=gene-L2557_RS04975;Name=rpmF;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=L2557_RS04975 NZ_JAIKUA010000056.1 Protein Homology CDS 20875 21045 . + 0 ID=cds-WP_006537252.1;Parent=gene-L2557_RS04975;Dbxref=GenBank:WP_006537252.1;Name=WP_006537252.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rpmF;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147057.1;locus_tag=L2557_RS04975;product=50S ribosomal protein L32;protein_id=WP_006537252.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 21070 22107 . + . ID=gene-L2557_RS04980;Name=plsX;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=L2557_RS04980 NZ_JAIKUA010000056.1 Protein Homology CDS 21070 22107 . + 0 ID=cds-WP_075673178.1;Parent=gene-L2557_RS04980;Dbxref=GenBank:WP_075673178.1;Name=WP_075673178.1;Ontology_term=GO:0008610,GO:0043811;gbkey=CDS;gene=plsX;go_function=phosphate:acyl-[acyl carrier protein] acyltransferase activity|0043811||IEA;go_process=lipid biosynthetic process|0008610||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147056.1;locus_tag=L2557_RS04980;product=phosphate acyltransferase PlsX;protein_id=WP_075673178.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 22112 23065 . + . ID=gene-L2557_RS04985;Name=L2557_RS04985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS04985 NZ_JAIKUA010000056.1 Protein Homology CDS 22112 23065 . + 0 ID=cds-WP_075673179.1;Parent=gene-L2557_RS04985;Dbxref=GenBank:WP_075673179.1;Name=WP_075673179.1;Ontology_term=GO:0006633,GO:0004315,GO:0016746,GO:0033818;gbkey=CDS;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA,acyltransferase activity|0016746||IEA,beta-ketoacyl-acyl-carrier-protein synthase III activity|0033818||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210933.1;locus_tag=L2557_RS04985;product=beta-ketoacyl-ACP synthase III;protein_id=WP_075673179.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 23085 24017 . + . ID=gene-L2557_RS04990;Name=fabD;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=L2557_RS04990 NZ_JAIKUA010000056.1 Protein Homology CDS 23085 24017 . + 0 ID=cds-WP_235409875.1;Parent=gene-L2557_RS04990;Dbxref=GenBank:WP_235409875.1;Name=WP_235409875.1;Ontology_term=GO:0006633,GO:0004314;gbkey=CDS;gene=fabD;go_function=[acyl-carrier-protein] S-malonyltransferase activity|0004314||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537249.1;locus_tag=L2557_RS04990;product=ACP S-malonyltransferase;protein_id=WP_235409875.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 24026 24760 . + . ID=gene-L2557_RS04995;Name=fabG;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=L2557_RS04995 NZ_JAIKUA010000056.1 Protein Homology CDS 24026 24760 . + 0 ID=cds-WP_075673181.1;Parent=gene-L2557_RS04995;Dbxref=GenBank:WP_075673181.1;Name=WP_075673181.1;Ontology_term=GO:0006633,GO:0004316,GO:0051287;gbkey=CDS;gene=fabG;go_function=3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity|0004316||IEA,NAD binding|0051287||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129017.1;locus_tag=L2557_RS04995;product=3-oxoacyl-ACP reductase FabG;protein_id=WP_075673181.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 24918 25154 . + . ID=gene-L2557_RS05000;Name=acpP;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=L2557_RS05000 NZ_JAIKUA010000056.1 Protein Homology CDS 24918 25154 . + 0 ID=cds-WP_004247087.1;Parent=gene-L2557_RS05000;Dbxref=GenBank:WP_004247087.1;Name=WP_004247087.1;Ontology_term=GO:0006633;gbkey=CDS;gene=acpP;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005293837.1;locus_tag=L2557_RS05000;product=acyl carrier protein;protein_id=WP_004247087.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 25229 26470 . + . ID=gene-L2557_RS05005;Name=fabF;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=L2557_RS05005 NZ_JAIKUA010000056.1 Protein Homology CDS 25229 26470 . + 0 ID=cds-WP_036913381.1;Parent=gene-L2557_RS05005;Dbxref=GenBank:WP_036913381.1;Name=WP_036913381.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabF;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309500.1;locus_tag=L2557_RS05005;product=beta-ketoacyl-ACP synthase II;protein_id=WP_036913381.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 26606 27433 . + . ID=gene-L2557_RS05010;Name=pabC;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=L2557_RS05010 NZ_JAIKUA010000056.1 Protein Homology CDS 26606 27433 . + 0 ID=cds-WP_235409876.1;Parent=gene-L2557_RS05010;Dbxref=GenBank:WP_235409876.1;Name=WP_235409876.1;Ontology_term=GO:0046656,GO:0008696,GO:0030170;gbkey=CDS;gene=pabC;go_function=4-amino-4-deoxychorismate lyase activity|0008696||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=folic acid biosynthetic process|0046656||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367764.1;locus_tag=L2557_RS05010;product=aminodeoxychorismate lyase;protein_id=WP_235409876.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 27451 28473 . + . ID=gene-L2557_RS05015;Name=mltG;gbkey=Gene;gene=mltG;gene_biotype=protein_coding;locus_tag=L2557_RS05015 NZ_JAIKUA010000056.1 Protein Homology CDS 27451 28473 . + 0 ID=cds-WP_235409877.1;Parent=gene-L2557_RS05015;Dbxref=GenBank:WP_235409877.1;Name=WP_235409877.1;Ontology_term=GO:0009252,GO:0071555,GO:0008932;gbkey=CDS;gene=mltG;go_function=lytic endotransglycosylase activity|0008932||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251852.1;locus_tag=L2557_RS05015;product=endolytic transglycosylase MltG;protein_id=WP_235409877.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 28476 29123 . + . ID=gene-L2557_RS05020;Name=tmk;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=L2557_RS05020 NZ_JAIKUA010000056.1 Protein Homology CDS 28476 29123 . + 0 ID=cds-WP_099659579.1;Parent=gene-L2557_RS05020;Dbxref=GenBank:WP_099659579.1;Name=WP_099659579.1;Ontology_term=GO:0006233,GO:0004798,GO:0005524;gbkey=CDS;gene=tmk;go_function=dTMP kinase activity|0004798||IEA,ATP binding|0005524||IEA;go_process=dTDP biosynthetic process|0006233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247091.1;locus_tag=L2557_RS05020;product=dTMP kinase;protein_id=WP_099659579.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 29120 30103 . + . ID=gene-L2557_RS05025;Name=holB;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=L2557_RS05025 NZ_JAIKUA010000056.1 Protein Homology CDS 29120 30103 . + 0 ID=cds-WP_099659580.1;Parent=gene-L2557_RS05025;Dbxref=GenBank:WP_099659580.1;Name=WP_099659580.1;Ontology_term=GO:0006260,GO:0003887,GO:0008408,GO:0009360;gbkey=CDS;gene=holB;go_component=DNA polymerase III complex|0009360||IEA;go_function=DNA-directed DNA polymerase activity|0003887||IEA,3'-5' exonuclease activity|0008408||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537240.1;locus_tag=L2557_RS05025;product=DNA polymerase III subunit delta';protein_id=WP_099659580.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 30179 30964 . + . ID=gene-L2557_RS05030;Name=L2557_RS05030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05030 NZ_JAIKUA010000056.1 Protein Homology CDS 30179 30964 . + 0 ID=cds-WP_075673186.1;Parent=gene-L2557_RS05030;Dbxref=GenBank:WP_075673186.1;Name=WP_075673186.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537239.1;locus_tag=L2557_RS05030;product=metal-dependent hydrolase;protein_id=WP_075673186.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 31007 31357 . + . ID=gene-L2557_RS05035;Name=hinT;gbkey=Gene;gene=hinT;gene_biotype=protein_coding;locus_tag=L2557_RS05035 NZ_JAIKUA010000056.1 Protein Homology CDS 31007 31357 . + 0 ID=cds-WP_075673187.1;Parent=gene-L2557_RS05035;Dbxref=GenBank:WP_075673187.1;Name=WP_075673187.1;gbkey=CDS;gene=hinT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251850.1;locus_tag=L2557_RS05035;product=purine nucleoside phosphoramidase;protein_id=WP_075673187.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 31397 31798 . + . ID=gene-L2557_RS05040;Name=L2557_RS05040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05040 NZ_JAIKUA010000056.1 Protein Homology CDS 31397 31798 . + 0 ID=cds-WP_099659581.1;Parent=gene-L2557_RS05040;Dbxref=GenBank:WP_099659581.1;Name=WP_099659581.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247828.1;locus_tag=L2557_RS05040;product=YcfL family protein;protein_id=WP_099659581.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 31816 32397 . + . ID=gene-L2557_RS05045;Name=L2557_RS05045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05045 NZ_JAIKUA010000056.1 Protein Homology CDS 31816 32397 . + 0 ID=cds-WP_075673189.1;Parent=gene-L2557_RS05045;Dbxref=GenBank:WP_075673189.1;Name=WP_075673189.1;Ontology_term=GO:0008360,GO:0009252,GO:0008047,GO:0019899,GO:0030234;gbkey=CDS;go_function=enzyme activator activity|0008047||IEA,enzyme binding|0019899||IEA,enzyme regulator activity|0030234||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247096.1;locus_tag=L2557_RS05045;product=penicillin-binding protein activator LpoB;protein_id=WP_075673189.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 32375 33274 . + . ID=gene-L2557_RS05050;Name=L2557_RS05050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05050 NZ_JAIKUA010000056.1 Protein Homology CDS 32375 33274 . + 0 ID=cds-WP_235409882.1;Parent=gene-L2557_RS05050;Dbxref=GenBank:WP_235409882.1;Name=WP_235409882.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537235.1;locus_tag=L2557_RS05050;product=phosphotransferase;protein_id=WP_235409882.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 33313 34332 . + . ID=gene-L2557_RS05055;Name=nagZ;gbkey=Gene;gene=nagZ;gene_biotype=protein_coding;locus_tag=L2557_RS05055 NZ_JAIKUA010000056.1 Protein Homology CDS 33313 34332 . + 0 ID=cds-WP_075673191.1;Parent=gene-L2557_RS05055;Dbxref=GenBank:WP_075673191.1;Name=WP_075673191.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;gene=nagZ;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247099.1;locus_tag=L2557_RS05055;product=beta-N-acetylhexosaminidase;protein_id=WP_075673191.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 34329 34868 . + . ID=gene-L2557_RS05060;Name=ycfP;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=L2557_RS05060 NZ_JAIKUA010000056.1 Protein Homology CDS 34329 34868 . + 0 ID=cds-WP_075673192.1;Parent=gene-L2557_RS05060;Dbxref=GenBank:WP_075673192.1;Name=WP_075673192.1;gbkey=CDS;gene=ycfP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537233.1;locus_tag=L2557_RS05060;product=alpha/beta hydrolase YcfP;protein_id=WP_075673192.1;transl_table=11 NZ_JAIKUA010000056.1 RefSeq gene 35325 36632 . + . ID=gene-L2557_RS05065;Name=L2557_RS05065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05065 NZ_JAIKUA010000056.1 Protein Homology CDS 35325 36632 . + 0 ID=cds-WP_075673193.1;Parent=gene-L2557_RS05065;Dbxref=GenBank:WP_075673193.1;Name=WP_075673193.1;Ontology_term=GO:0006116,GO:0003954;gbkey=CDS;go_function=NADH dehydrogenase activity|0003954||IEA;go_process=obsolete NADH oxidation|0006116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247830.1;locus_tag=L2557_RS05065;product=NAD(P)/FAD-dependent oxidoreductase;protein_id=WP_075673193.1;transl_table=11 ##sequence-region NZ_JAIKUA010000057.1 1 7972 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000057.1 RefSeq region 1 7972 . + . ID=NZ_JAIKUA010000057.1:1..7972;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000057.1 RefSeq gene 73 294 . - . ID=gene-L2557_RS05070;Name=L2557_RS05070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05070 NZ_JAIKUA010000057.1 Protein Homology CDS 73 294 . - 0 ID=cds-WP_235409885.1;Parent=gene-L2557_RS05070;Dbxref=GenBank:WP_235409885.1;Name=WP_235409885.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368178.1;locus_tag=L2557_RS05070;product=ogr/Delta-like zinc finger family protein;protein_id=WP_235409885.1;transl_table=11 NZ_JAIKUA010000057.1 RefSeq gene 347 1444 . - . ID=gene-L2557_RS05075;Name=L2557_RS05075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05075 NZ_JAIKUA010000057.1 Protein Homology CDS 347 1444 . - 0 ID=cds-WP_235409887.1;Parent=gene-L2557_RS05075;Dbxref=GenBank:WP_235409887.1;Name=WP_235409887.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536727.1;locus_tag=L2557_RS05075;product=phage late control D family protein;protein_id=WP_235409887.1;transl_table=11 NZ_JAIKUA010000057.1 RefSeq gene 1444 1908 . - . ID=gene-L2557_RS05080;Name=L2557_RS05080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05080 NZ_JAIKUA010000057.1 Protein Homology CDS 1444 1908 . - 0 ID=cds-WP_109398917.1;Parent=gene-L2557_RS05080;Dbxref=GenBank:WP_109398917.1;Name=WP_109398917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004706386.1;locus_tag=L2557_RS05080;product=phage tail protein;protein_id=WP_109398917.1;transl_table=11 NZ_JAIKUA010000057.1 RefSeq gene 1908 4769 . - . ID=gene-L2557_RS05085;Name=L2557_RS05085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05085 NZ_JAIKUA010000057.1 Protein Homology CDS 1908 4769 . - 0 ID=cds-WP_235409888.1;Parent=gene-L2557_RS05085;Dbxref=GenBank:WP_235409888.1;Name=WP_235409888.1;Ontology_term=GO:0016032,GO:0005198;gbkey=CDS;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368181.1;locus_tag=L2557_RS05085;product=phage tail tape measure protein;protein_id=WP_235409888.1;transl_table=11 NZ_JAIKUA010000057.1 RefSeq gene 4762 4935 . - . ID=gene-L2557_RS17960;Name=L2557_RS17960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17960 NZ_JAIKUA010000057.1 Protein Homology CDS 4762 4935 . - 0 ID=cds-WP_072070684.1;Parent=gene-L2557_RS17960;Dbxref=GenBank:WP_072070684.1;Name=WP_072070684.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF018260.6;locus_tag=L2557_RS17960;product=GpE family phage tail protein;protein_id=WP_072070684.1;transl_table=11 NZ_JAIKUA010000057.1 RefSeq gene 4896 5243 . - . ID=gene-L2557_RS05095;Name=L2557_RS05095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05095 NZ_JAIKUA010000057.1 Protein Homology CDS 4896 5243 . - 0 ID=cds-WP_235409889.1;Parent=gene-L2557_RS05095;Dbxref=GenBank:WP_235409889.1;Name=WP_235409889.1;Ontology_term=GO:0098003;gbkey=CDS;go_process=viral tail assembly|0098003||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368182.1;locus_tag=L2557_RS05095;product=phage tail assembly protein;protein_id=WP_235409889.1;transl_table=11 NZ_JAIKUA010000057.1 RefSeq gene 5263 5778 . - . ID=gene-L2557_RS05100;Name=L2557_RS05100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05100 NZ_JAIKUA010000057.1 Protein Homology CDS 5263 5778 . - 0 ID=cds-WP_036907684.1;Parent=gene-L2557_RS05100;Dbxref=GenBank:WP_036907684.1;Name=WP_036907684.1;Ontology_term=GO:0016032,GO:0005198,GO:0044423;gbkey=CDS;go_component=virion component|0044423||IEA;go_function=structural molecule activity|0005198||IEA;go_process=viral process|0016032||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536720.1;locus_tag=L2557_RS05100;product=phage major tail tube protein;protein_id=WP_036907684.1;transl_table=11 NZ_JAIKUA010000057.1 RefSeq gene 5782 6954 . - . ID=gene-L2557_RS05105;Name=L2557_RS05105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05105 NZ_JAIKUA010000057.1 Protein Homology CDS 5782 6954 . - 0 ID=cds-WP_235409890.1;Parent=gene-L2557_RS05105;Dbxref=GenBank:WP_235409890.1;Name=WP_235409890.1;Ontology_term=GO:0099000,GO:0098027;gbkey=CDS;go_component=virus tail%2C sheath|0098027||IEA;go_process=symbiont genome ejection through host cell envelope%2C contractile tail mechanism|0099000||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368184.1;locus_tag=L2557_RS05105;product=phage tail sheath protein;protein_id=WP_235409890.1;transl_table=11 NZ_JAIKUA010000057.1 RefSeq gene 7047 7424 . - . ID=gene-L2557_RS05110;Name=L2557_RS05110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05110 NZ_JAIKUA010000057.1 Protein Homology CDS 7047 7424 . - 0 ID=cds-WP_235409891.1;Parent=gene-L2557_RS05110;Dbxref=GenBank:WP_235409891.1;Name=WP_235409891.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF014467.6;locus_tag=L2557_RS05110;product=tail fiber assembly protein;protein_id=WP_235409891.1;transl_table=11 NZ_JAIKUA010000057.1 RefSeq pseudogene 7429 7972 . - . ID=gene-L2557_RS05115;Name=L2557_RS05115;end_range=7972,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS05115;partial=true;pseudo=true NZ_JAIKUA010000057.1 Protein Homology CDS 7429 7972 . - 1 ID=cds-L2557_RS05115;Parent=gene-L2557_RS05115;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=7972,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536718.1;locus_tag=L2557_RS05115;partial=true;product=hypothetical protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAIKUA010000058.1 1 5330 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000058.1 RefSeq region 1 5330 . + . ID=NZ_JAIKUA010000058.1:1..5330;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000058.1 RefSeq gene 91 1302 . - . ID=gene-L2557_RS05120;Name=fabB;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=L2557_RS05120 NZ_JAIKUA010000058.1 Protein Homology CDS 91 1302 . - 0 ID=cds-WP_075670586.1;Parent=gene-L2557_RS05120;Dbxref=GenBank:WP_075670586.1;Name=WP_075670586.1;Ontology_term=GO:0006633,GO:0004315;gbkey=CDS;gene=fabB;go_function=3-oxoacyl-[acyl-carrier-protein] synthase activity|0004315||IEA;go_process=fatty acid biosynthetic process|0006633||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243743.1;locus_tag=L2557_RS05120;product=beta-ketoacyl-ACP synthase I;protein_id=WP_075670586.1;transl_table=11 NZ_JAIKUA010000058.1 RefSeq gene 1508 3556 . + . ID=gene-L2557_RS05125;Name=mnmC;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;locus_tag=L2557_RS05125 NZ_JAIKUA010000058.1 Protein Homology CDS 1508 3556 . + 0 ID=cds-WP_235409892.1;Parent=gene-L2557_RS05125;Dbxref=GenBank:WP_235409892.1;Name=WP_235409892.1;Ontology_term=GO:0008033,GO:0004808,GO:0016491;gbkey=CDS;gene=mnmC;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,oxidoreductase activity|0016491||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250678.1;locus_tag=L2557_RS05125;product=bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmC2/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC1;protein_id=WP_235409892.1;transl_table=11 NZ_JAIKUA010000058.1 RefSeq gene 3645 4193 . - . ID=gene-L2557_RS05130;Name=L2557_RS05130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05130 NZ_JAIKUA010000058.1 Protein Homology CDS 3645 4193 . - 0 ID=cds-WP_099659394.1;Parent=gene-L2557_RS05130;Dbxref=GenBank:WP_099659394.1;Name=WP_099659394.1;Ontology_term=GO:0008080,GO:0016746;gbkey=CDS;go_function=N-acetyltransferase activity|0008080||IEA,acyltransferase activity|0016746||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248403.1;locus_tag=L2557_RS05130;product=GNAT family N-acetyltransferase;protein_id=WP_099659394.1;transl_table=11 NZ_JAIKUA010000058.1 RefSeq gene 4303 5199 . - . ID=gene-L2557_RS05135;Name=L2557_RS05135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05135 NZ_JAIKUA010000058.1 Protein Homology CDS 4303 5199 . - 0 ID=cds-WP_075670580.1;Parent=gene-L2557_RS05135;Dbxref=GenBank:WP_075670580.1;Name=WP_075670580.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243747.1;locus_tag=L2557_RS05135;product=cupin domain-containing protein;protein_id=WP_075670580.1;transl_table=11 ##sequence-region NZ_JAIKUA010000059.1 1 20225 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000059.1 RefSeq region 1 20225 . + . ID=NZ_JAIKUA010000059.1:1..20225;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000059.1 RefSeq gene 136 972 . - . ID=gene-L2557_RS05140;Name=L2557_RS05140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05140 NZ_JAIKUA010000059.1 Protein Homology CDS 136 972 . - 0 ID=cds-WP_109419521.1;Parent=gene-L2557_RS05140;Dbxref=GenBank:WP_109419521.1;Name=WP_109419521.1;Ontology_term=GO:0034755,GO:0005381,GO:0033573;gbkey=CDS;go_component=high-affinity iron permease complex|0033573||IEA;go_function=iron ion transmembrane transporter activity|0005381||IEA;go_process=iron ion transmembrane transport|0034755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534979.1;locus_tag=L2557_RS05140;product=FTR1 family iron permease;protein_id=WP_109419521.1;transl_table=11 NZ_JAIKUA010000059.1 RefSeq gene 975 1322 . - . ID=gene-L2557_RS05145;Name=L2557_RS05145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05145 NZ_JAIKUA010000059.1 Protein Homology CDS 975 1322 . - 0 ID=cds-WP_235409893.1;Parent=gene-L2557_RS05145;Dbxref=GenBank:WP_235409893.1;Name=WP_235409893.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245024.1;locus_tag=L2557_RS05145;product=cupredoxin domain-containing protein;protein_id=WP_235409893.1;transl_table=11 NZ_JAIKUA010000059.1 RefSeq gene 1390 1947 . - . ID=gene-L2557_RS05150;Name=L2557_RS05150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05150 NZ_JAIKUA010000059.1 Protein Homology CDS 1390 1947 . - 0 ID=cds-WP_235409894.1;Parent=gene-L2557_RS05150;Dbxref=GenBank:WP_235409894.1;Name=WP_235409894.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534977.1;locus_tag=L2557_RS05150;product=iron transporter;protein_id=WP_235409894.1;transl_table=11 NZ_JAIKUA010000059.1 RefSeq gene 2241 2528 . - . ID=gene-L2557_RS05155;Name=L2557_RS05155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05155 NZ_JAIKUA010000059.1 Protein Homology CDS 2241 2528 . - 0 ID=cds-WP_072063612.1;Parent=gene-L2557_RS05155;Dbxref=GenBank:WP_072063612.1;Name=WP_072063612.1;Ontology_term=GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245017.1;locus_tag=L2557_RS05155;product=helix-turn-helix domain-containing protein;protein_id=WP_072063612.1;transl_table=11 NZ_JAIKUA010000059.1 RefSeq gene 3131 5008 . + . ID=gene-L2557_RS05160;Name=gss;gbkey=Gene;gene=gss;gene_biotype=protein_coding;locus_tag=L2557_RS05160 NZ_JAIKUA010000059.1 Protein Homology CDS 3131 5008 . + 0 ID=cds-WP_099659940.1;Parent=gene-L2557_RS05160;Dbxref=GenBank:WP_099659940.1;Name=WP_099659940.1;gbkey=CDS;gene=gss;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367498.1;locus_tag=L2557_RS05160;product=bifunctional glutathionylspermidine amidase/synthase;protein_id=WP_099659940.1;transl_table=11 NZ_JAIKUA010000059.1 RefSeq gene 5275 6219 . - . ID=gene-L2557_RS05165;Name=dsdC;gbkey=Gene;gene=dsdC;gene_biotype=protein_coding;locus_tag=L2557_RS05165 NZ_JAIKUA010000059.1 Protein Homology CDS 5275 6219 . - 0 ID=cds-WP_075673475.1;Parent=gene-L2557_RS05165;Dbxref=GenBank:WP_075673475.1;Name=WP_075673475.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=dsdC;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245015.1;locus_tag=L2557_RS05165;product=DNA-binding transcriptional regulator DsdC;protein_id=WP_075673475.1;transl_table=11 NZ_JAIKUA010000059.1 RefSeq gene 6443 7780 . + . ID=gene-L2557_RS05170;Name=dsdX;gbkey=Gene;gene=dsdX;gene_biotype=protein_coding;locus_tag=L2557_RS05170 NZ_JAIKUA010000059.1 Protein Homology CDS 6443 7780 . + 0 ID=cds-WP_196563579.1;Parent=gene-L2557_RS05170;Dbxref=GenBank:WP_196563579.1;Name=WP_196563579.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=dsdX;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005229553.1;locus_tag=L2557_RS05170;product=D-serine transporter DsdX;protein_id=WP_196563579.1;transl_table=11 NZ_JAIKUA010000059.1 RefSeq gene 7793 9121 . + . ID=gene-L2557_RS05175;Name=L2557_RS05175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05175 NZ_JAIKUA010000059.1 Protein Homology CDS 7793 9121 . + 0 ID=cds-WP_099659938.1;Parent=gene-L2557_RS05175;Dbxref=GenBank:WP_099659938.1;Name=WP_099659938.1;Ontology_term=GO:0046416,GO:0008721,GO:0030170;gbkey=CDS;go_function=D-serine ammonia-lyase activity|0008721||IEA,pyridoxal phosphate binding|0030170||IEA;go_process=D-amino acid metabolic process|0046416||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247277.1;locus_tag=L2557_RS05175;product=D-serine ammonia-lyase;protein_id=WP_099659938.1;transl_table=11 NZ_JAIKUA010000059.1 RefSeq gene 9359 10399 . - . ID=gene-L2557_RS05180;Name=fbpC;gbkey=Gene;gene=fbpC;gene_biotype=protein_coding;locus_tag=L2557_RS05180 NZ_JAIKUA010000059.1 Protein Homology CDS 9359 10399 . - 0 ID=cds-WP_075673470.1;Parent=gene-L2557_RS05180;Dbxref=GenBank:WP_075673470.1;Name=WP_075673470.1;Ontology_term=GO:0055085,GO:0005524,GO:0022857,GO:0016020,GO:0043190;gbkey=CDS;gene=fbpC;go_component=membrane|0016020||IEA,ATP-binding cassette (ABC) transporter complex|0043190||IEA;go_function=ATP binding|0005524||IEA,transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245012.1;locus_tag=L2557_RS05180;product=ferric ABC transporter ATP-binding protein;protein_id=WP_075673470.1;transl_table=11 NZ_JAIKUA010000059.1 RefSeq gene 10415 12493 . - . ID=gene-L2557_RS05185;Name=L2557_RS05185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05185 NZ_JAIKUA010000059.1 Protein Homology CDS 10415 12493 . - 0 ID=cds-WP_099659937.1;Parent=gene-L2557_RS05185;Dbxref=GenBank:WP_099659937.1;Name=WP_099659937.1;Ontology_term=GO:0055085,GO:0042626,GO:0140359,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910556.1;locus_tag=L2557_RS05185;product=ABC transporter permease;protein_id=WP_099659937.1;transl_table=11 NZ_JAIKUA010000059.1 RefSeq gene 12568 13599 . - . ID=gene-L2557_RS05190;Name=L2557_RS05190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05190 NZ_JAIKUA010000059.1 Protein Homology CDS 12568 13599 . - 0 ID=cds-WP_069368510.1;Parent=gene-L2557_RS05190;Dbxref=GenBank:WP_069368510.1;Name=WP_069368510.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814718.1;locus_tag=L2557_RS05190;product=ABC transporter substrate-binding protein;protein_id=WP_069368510.1;transl_table=11 NZ_JAIKUA010000059.1 RefSeq gene 13602 14954 . - . ID=gene-L2557_RS05195;Name=uhpC;gbkey=Gene;gene=uhpC;gene_biotype=protein_coding;locus_tag=L2557_RS05195 NZ_JAIKUA010000059.1 Protein Homology CDS 13602 14954 . - 0 ID=cds-WP_083629108.1;Parent=gene-L2557_RS05195;Dbxref=GenBank:WP_083629108.1;Name=WP_083629108.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;gene=uhpC;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245008.1;locus_tag=L2557_RS05195;product=MFS transporter family glucose-6-phosphate receptor UhpC;protein_id=WP_083629108.1;transl_table=11 NZ_JAIKUA010000059.1 RefSeq gene 15022 16578 . - . ID=gene-L2557_RS05200;Name=L2557_RS05200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05200 NZ_JAIKUA010000059.1 Protein Homology CDS 15022 16578 . - 0 ID=cds-WP_191901806.1;Parent=gene-L2557_RS05200;Dbxref=GenBank:WP_191901806.1;Name=WP_191901806.1;Ontology_term=GO:0007165,GO:0000155,GO:0004673,GO:0005524;gbkey=CDS;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,ATP binding|0005524||IEA;go_process=signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247281.1;locus_tag=L2557_RS05200;product=MASE1 domain-containing sensor histidine kinase;protein_id=WP_191901806.1;transl_table=11 NZ_JAIKUA010000059.1 RefSeq gene 16580 17212 . - . ID=gene-L2557_RS05205;Name=L2557_RS05205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05205 NZ_JAIKUA010000059.1 Protein Homology CDS 16580 17212 . - 0 ID=cds-WP_075673466.1;Parent=gene-L2557_RS05205;Dbxref=GenBank:WP_075673466.1;Name=WP_075673466.1;Ontology_term=GO:0000160;gbkey=CDS;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245006.1;locus_tag=L2557_RS05205;product=response regulator transcription factor;protein_id=WP_075673466.1;transl_table=11 NZ_JAIKUA010000059.1 RefSeq gene 17442 17822 . - . ID=gene-L2557_RS05210;Name=panD;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=L2557_RS05210 NZ_JAIKUA010000059.1 Protein Homology CDS 17442 17822 . - 0 ID=cds-WP_064719124.1;Parent=gene-L2557_RS05210;Dbxref=GenBank:WP_064719124.1;Name=WP_064719124.1;Ontology_term=GO:0006523,GO:0004068;gbkey=CDS;gene=panD;go_function=aspartate 1-decarboxylase activity|0004068||IEA;go_process=alanine biosynthetic process|0006523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308162.1;locus_tag=L2557_RS05210;product=aspartate 1-decarboxylase;protein_id=WP_064719124.1;transl_table=11 NZ_JAIKUA010000059.1 RefSeq gene 17848 18702 . - . ID=gene-L2557_RS05215;Name=panC;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=L2557_RS05215 NZ_JAIKUA010000059.1 Protein Homology CDS 17848 18702 . - 0 ID=cds-WP_075673465.1;Parent=gene-L2557_RS05215;Dbxref=GenBank:WP_075673465.1;Name=WP_075673465.1;Ontology_term=GO:0015940,GO:0004592;gbkey=CDS;gene=panC;go_function=pantoate-beta-alanine ligase activity|0004592||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845114.1;locus_tag=L2557_RS05215;product=pantoate--beta-alanine ligase;protein_id=WP_075673465.1;transl_table=11 NZ_JAIKUA010000059.1 RefSeq gene 18745 19536 . - . ID=gene-L2557_RS05220;Name=panB;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=L2557_RS05220 NZ_JAIKUA010000059.1 Protein Homology CDS 18745 19536 . - 0 ID=cds-WP_075673464.1;Parent=gene-L2557_RS05220;Dbxref=GenBank:WP_075673464.1;Name=WP_075673464.1;Ontology_term=GO:0015940,GO:0003864;gbkey=CDS;gene=panB;go_function=3-methyl-2-oxobutanoate hydroxymethyltransferase activity|0003864||IEA;go_process=pantothenate biosynthetic process|0015940||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247283.1;locus_tag=L2557_RS05220;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=WP_075673464.1;transl_table=11 NZ_JAIKUA010000059.1 RefSeq pseudogene 19959 20225 . + . ID=gene-L2557_RS05225;Name=L2557_RS05225;end_range=20225,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS05225;partial=true;pseudo=true;start_range=.,19959 NZ_JAIKUA010000059.1 Protein Homology CDS 19959 20225 . + 0 ID=cds-L2557_RS05225;Parent=gene-L2557_RS05225;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;end_range=20225,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_415949.3;locus_tag=L2557_RS05225;partial=true;product=RNA-guided endonuclease InsQ/TnpB family protein;pseudo=true;start_range=.,19959;transl_table=11 ##sequence-region NZ_JAIKUA010000006.1 1 6624 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000006.1 RefSeq region 1 6624 . + . ID=NZ_JAIKUA010000006.1:1..6624;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000006.1 RefSeq gene 1 777 . - . ID=gene-L2557_RS00565;Name=fdxH;gbkey=Gene;gene=fdxH;gene_biotype=protein_coding;locus_tag=L2557_RS00565;partial=true;start_range=.,1 NZ_JAIKUA010000006.1 Protein Homology CDS 1 777 . - 0 ID=cds-WP_235409725.1;Parent=gene-L2557_RS00565;Dbxref=GenBank:WP_235409725.1;Name=WP_235409725.1;Ontology_term=GO:0015944,GO:0008863,GO:0051539,GO:0016020;gbkey=CDS;gene=fdxH;go_component=membrane|0016020||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=formate oxidation|0015944||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462916.1;locus_tag=L2557_RS00565;partial=true;product=formate dehydrogenase subunit beta;protein_id=WP_235409725.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000006.1 RefSeq gene 789 3836 . - . ID=gene-L2557_RS00570;Name=fdnG;gbkey=Gene;gene=fdnG;gene_biotype=protein_coding;locus_tag=L2557_RS00570 NZ_JAIKUA010000006.1 Protein Homology CDS 789 3836 . - 0 ID=cds-WP_143484136.1;Parent=gene-L2557_RS00570;Dbxref=GenBank:WP_143484136.1;Name=WP_143484136.1;Ontology_term=GO:0015942,GO:0008863,GO:0009055,GO:0043546,GO:0047111,GO:0009326;gbkey=CDS;gene=fdnG;go_component=formate dehydrogenase complex|0009326||IEA;go_function=formate dehydrogenase (NAD+) activity|0008863||IEA,electron transfer activity|0009055||IEA,molybdopterin cofactor binding|0043546||IEA,formate dehydrogenase (cytochrome-c-553) activity|0047111||IEA;go_process=formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_462917.1;locus_tag=L2557_RS00570;product=formate dehydrogenase-N subunit alpha;protein_id=WP_143484136.1;transl_except=(pos:complement(3249..3251)%2Caa:Sec);transl_table=11 NZ_JAIKUA010000006.1 RefSeq gene 4015 4845 . + . ID=gene-L2557_RS00575;Name=fdhD;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=L2557_RS00575 NZ_JAIKUA010000006.1 Protein Homology CDS 4015 4845 . + 0 ID=cds-WP_109419596.1;Parent=gene-L2557_RS00575;Dbxref=GenBank:WP_109419596.1;Name=WP_109419596.1;Ontology_term=GO:0009061,GO:0015942,GO:0016783,GO:0009326;gbkey=CDS;gene=fdhD;go_component=formate dehydrogenase complex|0009326||IEA;go_function=sulfurtransferase activity|0016783||IEA;go_process=anaerobic respiration|0009061||IEA,formate metabolic process|0015942||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246534.1;locus_tag=L2557_RS00575;product=formate dehydrogenase accessory sulfurtransferase FdhD;protein_id=WP_109419596.1;transl_table=11 NZ_JAIKUA010000006.1 RefSeq gene 4842 5606 . - . ID=gene-L2557_RS00580;Name=L2557_RS00580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00580 NZ_JAIKUA010000006.1 Protein Homology CDS 4842 5606 . - 0 ID=cds-WP_235409726.1;Parent=gene-L2557_RS00580;Dbxref=GenBank:WP_235409726.1;Name=WP_235409726.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249783.1;locus_tag=L2557_RS00580;product=N-acetyltransferase;protein_id=WP_235409726.1;transl_table=11 NZ_JAIKUA010000006.1 RefSeq gene 5642 6505 . - . ID=gene-L2557_RS00585;Name=L2557_RS00585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00585 NZ_JAIKUA010000006.1 Protein Homology CDS 5642 6505 . - 0 ID=cds-WP_235409727.1;Parent=gene-L2557_RS00585;Dbxref=GenBank:WP_235409727.1;Name=WP_235409727.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017826978.1;locus_tag=L2557_RS00585;product=ATP-grasp fold amidoligase family protein;protein_id=WP_235409727.1;transl_table=11 ##sequence-region NZ_JAIKUA010000060.1 1 15554 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000060.1 RefSeq region 1 15554 . + . ID=NZ_JAIKUA010000060.1:1..15554;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000060.1 RefSeq gene 47 1876 . - . ID=gene-L2557_RS05230;Name=L2557_RS05230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05230 NZ_JAIKUA010000060.1 Protein Homology CDS 47 1876 . - 0 ID=cds-WP_099659405.1;Parent=gene-L2557_RS05230;Dbxref=GenBank:WP_099659405.1;Name=WP_099659405.1;Ontology_term=GO:0008324;gbkey=CDS;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248390.1;locus_tag=L2557_RS05230;product=SLC13 family permease;protein_id=WP_099659405.1;transl_table=11 NZ_JAIKUA010000060.1 RefSeq gene 1986 2648 . - . ID=gene-L2557_RS05235;Name=L2557_RS05235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05235 NZ_JAIKUA010000060.1 Protein Homology CDS 1986 2648 . - 0 ID=cds-WP_075670624.1;Parent=gene-L2557_RS05235;Dbxref=GenBank:WP_075670624.1;Name=WP_075670624.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533318.1;locus_tag=L2557_RS05235;product=sugar phosphatase;protein_id=WP_075670624.1;transl_table=11 NZ_JAIKUA010000060.1 RefSeq gene 2689 3183 . - . ID=gene-L2557_RS05240;Name=L2557_RS05240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05240 NZ_JAIKUA010000060.1 Protein Homology CDS 2689 3183 . - 0 ID=cds-WP_075670700.1;Parent=gene-L2557_RS05240;Dbxref=GenBank:WP_075670700.1;Name=WP_075670700.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461277.1;locus_tag=L2557_RS05240;product=YfbU family protein;protein_id=WP_075670700.1;transl_table=11 NZ_JAIKUA010000060.1 RefSeq gene 3322 3777 . - . ID=gene-L2557_RS05245;Name=yfbV;gbkey=Gene;gene=yfbV;gene_biotype=protein_coding;locus_tag=L2557_RS05245 NZ_JAIKUA010000060.1 Protein Homology CDS 3322 3777 . - 0 ID=cds-WP_069367978.1;Parent=gene-L2557_RS05245;Dbxref=GenBank:WP_069367978.1;Name=WP_069367978.1;gbkey=CDS;gene=yfbV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243712.1;locus_tag=L2557_RS05245;product=terminus macrodomain insulation protein YfbV;protein_id=WP_069367978.1;transl_table=11 NZ_JAIKUA010000060.1 RefSeq gene 4170 5372 . + . ID=gene-L2557_RS05250;Name=ackA;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=L2557_RS05250 NZ_JAIKUA010000060.1 Protein Homology CDS 4170 5372 . + 0 ID=cds-WP_006533321.1;Parent=gene-L2557_RS05250;Dbxref=GenBank:WP_006533321.1;Name=WP_006533321.1;gbkey=CDS;gene=ackA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005129491.1;locus_tag=L2557_RS05250;product=acetate kinase;protein_id=WP_006533321.1;transl_table=11 NZ_JAIKUA010000060.1 RefSeq gene 5450 7594 . + . ID=gene-L2557_RS05255;Name=pta;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=L2557_RS05255 NZ_JAIKUA010000060.1 Protein Homology CDS 5450 7594 . + 0 ID=cds-WP_075670622.1;Parent=gene-L2557_RS05255;Dbxref=GenBank:WP_075670622.1;Name=WP_075670622.1;Ontology_term=GO:0016407;gbkey=CDS;gene=pta;go_function=acetyltransferase activity|0016407||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010846741.1;locus_tag=L2557_RS05255;product=phosphate acetyltransferase;protein_id=WP_075670622.1;transl_table=11 NZ_JAIKUA010000060.1 RefSeq gene 8004 8147 . + . ID=gene-L2557_RS05260;Name=L2557_RS05260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05260 NZ_JAIKUA010000060.1 Protein Homology CDS 8004 8147 . + 0 ID=cds-WP_072063187.1;Parent=gene-L2557_RS05260;Dbxref=GenBank:WP_072063187.1;Name=WP_072063187.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: protein motif:HMM:NF013968.6;locus_tag=L2557_RS05260;product=Hok/Gef family protein;protein_id=WP_072063187.1;transl_table=11 NZ_JAIKUA010000060.1 RefSeq gene 8219 9442 . - . ID=gene-L2557_RS05265;Name=alr;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=L2557_RS05265 NZ_JAIKUA010000060.1 Protein Homology CDS 8219 9442 . - 0 ID=cds-WP_159241941.1;Parent=gene-L2557_RS05265;Dbxref=GenBank:WP_159241941.1;Name=WP_159241941.1;Ontology_term=GO:0006522,GO:0009252,GO:0008784;gbkey=CDS;gene=alr;go_function=alanine racemase activity|0008784||IEA;go_process=alanine metabolic process|0006522||IEA,peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250690.1;locus_tag=L2557_RS05265;product=alanine racemase;protein_id=WP_159241941.1;transl_table=11 NZ_JAIKUA010000060.1 RefSeq gene 9796 11052 . - . ID=gene-L2557_RS05270;Name=L2557_RS05270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05270 NZ_JAIKUA010000060.1 Protein Homology CDS 9796 11052 . - 0 ID=cds-WP_164530583.1;Parent=gene-L2557_RS05270;Dbxref=GenBank:WP_164530583.1;Name=WP_164530583.1;Ontology_term=GO:0009401;gbkey=CDS;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815933.1;locus_tag=L2557_RS05270;product=PTS ascorbate transporter subunit IIC;protein_id=WP_164530583.1;transl_table=11 NZ_JAIKUA010000060.1 RefSeq gene 11063 11350 . - . ID=gene-L2557_RS05275;Name=L2557_RS05275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05275 NZ_JAIKUA010000060.1 Protein Homology CDS 11063 11350 . - 0 ID=cds-WP_075670616.1;Parent=gene-L2557_RS05275;Dbxref=GenBank:WP_075670616.1;Name=WP_075670616.1;Ontology_term=GO:0008643,GO:0009401,GO:0008982;gbkey=CDS;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004717867.1;locus_tag=L2557_RS05275;product=PTS sugar transporter subunit IIB;protein_id=WP_075670616.1;transl_table=11 NZ_JAIKUA010000060.1 RefSeq gene 11380 11823 . - . ID=gene-L2557_RS05280;Name=L2557_RS05280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05280 NZ_JAIKUA010000060.1 Protein Homology CDS 11380 11823 . - 0 ID=cds-WP_099659403.1;Parent=gene-L2557_RS05280;Dbxref=GenBank:WP_099659403.1;Name=WP_099659403.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192680.1;locus_tag=L2557_RS05280;product=PTS sugar transporter subunit IIA;protein_id=WP_099659403.1;transl_table=11 NZ_JAIKUA010000060.1 RefSeq gene 12051 13097 . + . ID=gene-L2557_RS05285;Name=L2557_RS05285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05285 NZ_JAIKUA010000060.1 Protein Homology CDS 12051 13097 . + 0 ID=cds-WP_088495111.1;Parent=gene-L2557_RS05285;Dbxref=GenBank:WP_088495111.1;Name=WP_088495111.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533330.1;locus_tag=L2557_RS05285;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_088495111.1;transl_table=11 NZ_JAIKUA010000060.1 RefSeq gene 13094 13636 . - . ID=gene-L2557_RS05290;Name=yfcD;gbkey=Gene;gene=yfcD;gene_biotype=protein_coding;locus_tag=L2557_RS05290 NZ_JAIKUA010000060.1 Protein Homology CDS 13094 13636 . - 0 ID=cds-WP_072063189.1;Parent=gene-L2557_RS05290;Dbxref=GenBank:WP_072063189.1;Name=WP_072063189.1;Ontology_term=GO:0016817;gbkey=CDS;gene=yfcD;go_function=hydrolase activity%2C acting on acid anhydrides|0016817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248395.1;locus_tag=L2557_RS05290;product=NUDIX hydrolase YfcD;protein_id=WP_072063189.1;transl_table=11 NZ_JAIKUA010000060.1 RefSeq gene 13834 14451 . + . ID=gene-L2557_RS05295;Name=L2557_RS05295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05295 NZ_JAIKUA010000060.1 Protein Homology CDS 13834 14451 . + 0 ID=cds-WP_075670610.1;Parent=gene-L2557_RS05295;Dbxref=GenBank:WP_075670610.1;Name=WP_075670610.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010846971.1;locus_tag=L2557_RS05295;product=glutathione binding-like protein;protein_id=WP_075670610.1;transl_table=11 NZ_JAIKUA010000060.1 RefSeq gene 14515 15420 . + . ID=gene-L2557_RS05300;Name=L2557_RS05300;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05300 NZ_JAIKUA010000060.1 Protein Homology CDS 14515 15420 . + 0 ID=cds-WP_075670608.1;Parent=gene-L2557_RS05300;Dbxref=GenBank:WP_075670608.1;Name=WP_075670608.1;Ontology_term=GO:0003824;gbkey=CDS;go_function=catalytic activity|0003824||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533334.1;locus_tag=L2557_RS05300;product=TIGR01777 family oxidoreductase;protein_id=WP_075670608.1;transl_table=11 ##sequence-region NZ_JAIKUA010000061.1 1 13753 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000061.1 RefSeq region 1 13753 . + . ID=NZ_JAIKUA010000061.1:1..13753;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000061.1 RefSeq gene 166 2100 . - . ID=gene-L2557_RS05305;Name=L2557_RS05305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05305 NZ_JAIKUA010000061.1 Protein Homology CDS 166 2100 . - 0 ID=cds-WP_099659190.1;Parent=gene-L2557_RS05305;Dbxref=GenBank:WP_099659190.1;Name=WP_099659190.1;Ontology_term=GO:0005524;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368513.1;locus_tag=L2557_RS05305;product=ABC transporter ATP-binding protein;protein_id=WP_099659190.1;transl_table=11 NZ_JAIKUA010000061.1 RefSeq gene 2222 2773 . + . ID=gene-L2557_RS05310;Name=kefG;gbkey=Gene;gene=kefG;gene_biotype=protein_coding;locus_tag=L2557_RS05310 NZ_JAIKUA010000061.1 Protein Homology CDS 2222 2773 . + 0 ID=cds-WP_223673798.1;Parent=gene-L2557_RS05310;Dbxref=GenBank:WP_223673798.1;Name=WP_223673798.1;Ontology_term=GO:0006813;gbkey=CDS;gene=kefG;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249118.1;locus_tag=L2557_RS05310;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=WP_223673798.1;transl_table=11 NZ_JAIKUA010000061.1 RefSeq gene 2773 4626 . + . ID=gene-L2557_RS05315;Name=kefB;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=L2557_RS05315 NZ_JAIKUA010000061.1 Protein Homology CDS 2773 4626 . + 0 ID=cds-WP_075674194.1;Parent=gene-L2557_RS05315;Dbxref=GenBank:WP_075674194.1;Name=WP_075674194.1;Ontology_term=GO:0006813,GO:0015503;gbkey=CDS;gene=kefB;go_function=glutathione-regulated potassium exporter activity|0015503||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004236506.1;locus_tag=L2557_RS05315;product=glutathione-regulated potassium-efflux system protein KefB;protein_id=WP_075674194.1;transl_table=11 NZ_JAIKUA010000061.1 RefSeq gene 4640 4843 . + . ID=gene-L2557_RS05320;Name=L2557_RS05320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05320 NZ_JAIKUA010000061.1 Protein Homology CDS 4640 4843 . + 0 ID=cds-WP_036914399.1;Parent=gene-L2557_RS05320;Dbxref=GenBank:WP_036914399.1;Name=WP_036914399.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534684.1;locus_tag=L2557_RS05320;product=YheV family putative zinc ribbon protein;protein_id=WP_036914399.1;transl_table=11 NZ_JAIKUA010000061.1 RefSeq gene 4932 5570 . + . ID=gene-L2557_RS05325;Name=slyD;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=L2557_RS05325 NZ_JAIKUA010000061.1 Protein Homology CDS 4932 5570 . + 0 ID=cds-WP_069369613.1;Parent=gene-L2557_RS05325;Dbxref=GenBank:WP_069369613.1;Name=WP_069369613.1;Ontology_term=GO:0003755;gbkey=CDS;gene=slyD;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246887.1;locus_tag=L2557_RS05325;product=peptidylprolyl isomerase;protein_id=WP_069369613.1;transl_table=11 NZ_JAIKUA010000061.1 RefSeq gene 5651 5869 . - . ID=gene-L2557_RS05330;Name=L2557_RS05330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05330 NZ_JAIKUA010000061.1 Protein Homology CDS 5651 5869 . - 0 ID=cds-WP_023583298.1;Parent=gene-L2557_RS05330;Dbxref=GenBank:WP_023583298.1;Name=WP_023583298.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249121.1;locus_tag=L2557_RS05330;product=SlyX family protein;protein_id=WP_023583298.1;transl_table=11 NZ_JAIKUA010000061.1 RefSeq gene 6204 6956 . + . ID=gene-L2557_RS05335;Name=fkpA;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=L2557_RS05335 NZ_JAIKUA010000061.1 Protein Homology CDS 6204 6956 . + 0 ID=cds-WP_235409895.1;Parent=gene-L2557_RS05335;Dbxref=GenBank:WP_235409895.1;Name=WP_235409895.1;Ontology_term=GO:0006457,GO:0003755;gbkey=CDS;gene=fkpA;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246889.1;locus_tag=L2557_RS05335;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_235409895.1;transl_table=11 NZ_JAIKUA010000061.1 RefSeq gene 7055 7936 . - . ID=gene-L2557_RS05340;Name=L2557_RS05340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05340 NZ_JAIKUA010000061.1 Protein Homology CDS 7055 7936 . - 0 ID=cds-WP_075674196.1;Parent=gene-L2557_RS05340;Dbxref=GenBank:WP_075674196.1;Name=WP_075674196.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246890.1;locus_tag=L2557_RS05340;product=DMT family transporter;protein_id=WP_075674196.1;transl_table=11 NZ_JAIKUA010000061.1 RefSeq gene 8083 8241 . - . ID=gene-L2557_RS05345;Name=L2557_RS05345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05345 NZ_JAIKUA010000061.1 GeneMarkS-2+ CDS 8083 8241 . - 0 ID=cds-WP_156734278.1;Parent=gene-L2557_RS05345;Dbxref=GenBank:WP_156734278.1;Name=WP_156734278.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS05345;product=hypothetical protein;protein_id=WP_156734278.1;transl_table=11 NZ_JAIKUA010000061.1 RefSeq gene 8589 9293 . + . ID=gene-L2557_RS05350;Name=L2557_RS05350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05350 NZ_JAIKUA010000061.1 Protein Homology CDS 8589 9293 . + 0 ID=cds-WP_023583301.1;Parent=gene-L2557_RS05350;Dbxref=GenBank:WP_023583301.1;Name=WP_023583301.1;Ontology_term=GO:0006355,GO:0007165,GO:0003677,GO:0003700,GO:0005515,GO:0140110;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,protein binding|0005515||IEA,transcription regulator activity|0140110||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246891.1;locus_tag=L2557_RS05350;product=helix-turn-helix transcriptional regulator;protein_id=WP_023583301.1;transl_table=11 NZ_JAIKUA010000061.1 RefSeq gene 9303 9698 . + . ID=gene-L2557_RS05355;Name=tusD;gbkey=Gene;gene=tusD;gene_biotype=protein_coding;locus_tag=L2557_RS05355 NZ_JAIKUA010000061.1 Protein Homology CDS 9303 9698 . + 0 ID=cds-WP_075674197.1;Parent=gene-L2557_RS05355;Dbxref=GenBank:WP_075674197.1;Name=WP_075674197.1;Ontology_term=GO:0008033,GO:0016783;gbkey=CDS;gene=tusD;go_function=sulfurtransferase activity|0016783||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013185626.1;locus_tag=L2557_RS05355;product=sulfurtransferase complex subunit TusD;protein_id=WP_075674197.1;transl_table=11 NZ_JAIKUA010000061.1 RefSeq gene 9698 10066 . + . ID=gene-L2557_RS05360;Name=tusC;gbkey=Gene;gene=tusC;gene_biotype=protein_coding;locus_tag=L2557_RS05360 NZ_JAIKUA010000061.1 Protein Homology CDS 9698 10066 . + 0 ID=cds-WP_083629137.1;Parent=gene-L2557_RS05360;Dbxref=GenBank:WP_083629137.1;Name=WP_083629137.1;gbkey=CDS;gene=tusC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250083.1;locus_tag=L2557_RS05360;product=sulfurtransferase complex subunit TusC;protein_id=WP_083629137.1;transl_table=11 NZ_JAIKUA010000061.1 RefSeq gene 10098 10391 . + . ID=gene-L2557_RS05365;Name=tusB;gbkey=Gene;gene=tusB;gene_biotype=protein_coding;locus_tag=L2557_RS05365 NZ_JAIKUA010000061.1 Protein Homology CDS 10098 10391 . + 0 ID=cds-WP_099659186.1;Parent=gene-L2557_RS05365;Dbxref=GenBank:WP_099659186.1;Name=WP_099659186.1;Ontology_term=GO:0002143;gbkey=CDS;gene=tusB;go_process=tRNA wobble position uridine thiolation|0002143||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534698.1;locus_tag=L2557_RS05365;product=sulfurtransferase complex subunit TusB;protein_id=WP_099659186.1;transl_table=11 NZ_JAIKUA010000061.1 RefSeq gene 10519 10893 . + . ID=gene-L2557_RS05370;Name=rpsL;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=L2557_RS05370 NZ_JAIKUA010000061.1 Protein Homology CDS 10519 10893 . + 0 ID=cds-WP_004236497.1;Parent=gene-L2557_RS05370;Dbxref=GenBank:WP_004236497.1;Name=WP_004236497.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsL;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005306278.1;locus_tag=L2557_RS05370;product=30S ribosomal protein S12;protein_id=WP_004236497.1;transl_table=11 NZ_JAIKUA010000061.1 RefSeq gene 10992 11462 . + . ID=gene-L2557_RS05375;Name=rpsG;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=L2557_RS05375 NZ_JAIKUA010000061.1 Protein Homology CDS 10992 11462 . + 0 ID=cds-WP_004246897.1;Parent=gene-L2557_RS05375;Dbxref=GenBank:WP_004246897.1;Name=WP_004246897.1;Ontology_term=GO:0006412,GO:0003735,GO:0015935;gbkey=CDS;gene=rpsG;go_component=small ribosomal subunit|0015935||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001742319.1;locus_tag=L2557_RS05375;product=30S ribosomal protein S7;protein_id=WP_004246897.1;transl_table=11 NZ_JAIKUA010000061.1 RefSeq gene 11541 13655 . + . ID=gene-L2557_RS05380;Name=fusA;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=L2557_RS05380 NZ_JAIKUA010000061.1 Protein Homology CDS 11541 13655 . + 0 ID=cds-WP_109419289.1;Parent=gene-L2557_RS05380;Dbxref=GenBank:WP_109419289.1;Name=WP_109419289.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;gbkey=CDS;gene=fusA;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004236495.1;locus_tag=L2557_RS05380;product=elongation factor G;protein_id=WP_109419289.1;transl_table=11 ##sequence-region NZ_JAIKUA010000062.1 1 15860 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000062.1 RefSeq region 1 15860 . + . ID=NZ_JAIKUA010000062.1:1..15860;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000062.1 RefSeq gene 226 1479 . + . ID=gene-L2557_RS05385;Name=sstT;gbkey=Gene;gene=sstT;gene_biotype=protein_coding;locus_tag=L2557_RS05385 NZ_JAIKUA010000062.1 Protein Homology CDS 226 1479 . + 0 ID=cds-WP_235409896.1;Parent=gene-L2557_RS05385;Dbxref=GenBank:WP_235409896.1;Name=WP_235409896.1;Ontology_term=GO:0015826,GO:0032329,GO:0015293,GO:0016020;gbkey=CDS;gene=sstT;go_component=membrane|0016020||IEA;go_function=symporter activity|0015293||IEA;go_process=threonine transport|0015826||IEA,serine transport|0032329||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245243.1;locus_tag=L2557_RS05385;product=serine/threonine transporter SstT;protein_id=WP_235409896.1;transl_table=11 NZ_JAIKUA010000062.1 RefSeq gene 1594 3612 . - . ID=gene-L2557_RS05390;Name=L2557_RS05390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05390 NZ_JAIKUA010000062.1 Protein Homology CDS 1594 3612 . - 0 ID=cds-WP_235409897.1;Parent=gene-L2557_RS05390;Dbxref=GenBank:WP_235409897.1;Name=WP_235409897.1;Ontology_term=GO:0006635,GO:0010181,GO:0051539;gbkey=CDS;go_function=FMN binding|0010181||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=fatty acid beta-oxidation|0006635||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628233.1;locus_tag=L2557_RS05390;product=NADPH-dependent 2%2C4-dienoyl-CoA reductase;protein_id=WP_235409897.1;transl_table=11 NZ_JAIKUA010000062.1 RefSeq gene 3882 4298 . + . ID=gene-L2557_RS05395;Name=L2557_RS05395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05395 NZ_JAIKUA010000062.1 Protein Homology CDS 3882 4298 . + 0 ID=cds-WP_075671373.1;Parent=gene-L2557_RS05395;Dbxref=GenBank:WP_075671373.1;Name=WP_075671373.1;Ontology_term=GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248942.1;locus_tag=L2557_RS05395;product=DoxX family protein;protein_id=WP_075671373.1;transl_table=11 NZ_JAIKUA010000062.1 RefSeq gene 4449 7247 . - . ID=gene-L2557_RS05400;Name=L2557_RS05400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05400 NZ_JAIKUA010000062.1 Protein Homology CDS 4449 7247 . - 0 ID=cds-WP_235409898.1;Parent=gene-L2557_RS05400;Dbxref=GenBank:WP_235409898.1;Name=WP_235409898.1;Ontology_term=GO:0008237,GO:0046872;gbkey=CDS;go_function=metallopeptidase activity|0008237||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248943.1;locus_tag=L2557_RS05400;product=M16 family metallopeptidase;protein_id=WP_235409898.1;transl_table=11 NZ_JAIKUA010000062.1 RefSeq gene 7237 8946 . - . ID=gene-L2557_RS05405;Name=L2557_RS05405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05405 NZ_JAIKUA010000062.1 Protein Homology CDS 7237 8946 . - 0 ID=cds-WP_075671369.1;Parent=gene-L2557_RS05405;Dbxref=GenBank:WP_075671369.1;Name=WP_075671369.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827068.1;locus_tag=L2557_RS05405;product=ABC transporter ATP-binding protein/permease;protein_id=WP_075671369.1;transl_table=11 NZ_JAIKUA010000062.1 RefSeq gene 9010 11757 . - . ID=gene-L2557_RS05410;Name=L2557_RS05410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05410 NZ_JAIKUA010000062.1 Protein Homology CDS 9010 11757 . - 0 ID=cds-WP_099659996.1;Parent=gene-L2557_RS05410;Dbxref=GenBank:WP_099659996.1;Name=WP_099659996.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248945.1;locus_tag=L2557_RS05410;product=TonB-dependent receptor;protein_id=WP_099659996.1;transl_table=11 NZ_JAIKUA010000062.1 RefSeq gene 11861 12889 . - . ID=gene-L2557_RS05415;Name=L2557_RS05415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05415 NZ_JAIKUA010000062.1 Protein Homology CDS 11861 12889 . - 0 ID=cds-WP_235409899.1;Parent=gene-L2557_RS05415;Dbxref=GenBank:WP_235409899.1;Name=WP_235409899.1;Ontology_term=GO:0006811,GO:0004888,GO:0016989;gbkey=CDS;go_function=transmembrane signaling receptor activity|0004888||IEA,sigma factor antagonist activity|0016989||IEA;go_process=monoatomic ion transport|0006811||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245237.1;locus_tag=L2557_RS05415;product=FecR family protein;protein_id=WP_235409899.1;transl_table=11 NZ_JAIKUA010000062.1 RefSeq gene 12879 13427 . - . ID=gene-L2557_RS05420;Name=L2557_RS05420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05420 NZ_JAIKUA010000062.1 Protein Homology CDS 12879 13427 . - 0 ID=cds-WP_075671365.1;Parent=gene-L2557_RS05420;Dbxref=GenBank:WP_075671365.1;Name=WP_075671365.1;Ontology_term=GO:0006352,GO:0003677,GO:0016987;gbkey=CDS;go_function=DNA binding|0003677||IEA,sigma factor activity|0016987||IEA;go_process=DNA-templated transcription initiation|0006352||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248947.1;locus_tag=L2557_RS05420;product=RNA polymerase sigma factor;protein_id=WP_075671365.1;transl_table=11 NZ_JAIKUA010000062.1 RefSeq gene 13599 14396 . + . ID=gene-L2557_RS05425;Name=L2557_RS05425;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05425 NZ_JAIKUA010000062.1 Protein Homology CDS 13599 14396 . + 0 ID=cds-WP_235409900.1;Parent=gene-L2557_RS05425;Dbxref=GenBank:WP_235409900.1;Name=WP_235409900.1;Ontology_term=GO:0055085,GO:0031992,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=energy transducer activity|0031992||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245235.1;locus_tag=L2557_RS05425;product=energy transducer TonB;protein_id=WP_235409900.1;transl_table=11 NZ_JAIKUA010000062.1 RefSeq gene 14485 15860 . - . ID=gene-L2557_RS05430;Name=ettA;end_range=15860,.;gbkey=Gene;gene=ettA;gene_biotype=protein_coding;locus_tag=L2557_RS05430;partial=true NZ_JAIKUA010000062.1 Protein Homology CDS 14485 15860 . - 2 ID=cds-WP_235409901.1;Parent=gene-L2557_RS05430;Dbxref=GenBank:WP_235409901.1;Name=WP_235409901.1;Ontology_term=GO:0045900,GO:0005524;end_range=15860,.;gbkey=CDS;gene=ettA;go_function=ATP binding|0005524||IEA;go_process=negative regulation of translational elongation|0045900||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_313376.1;locus_tag=L2557_RS05430;partial=true;product=energy-dependent translational throttle protein EttA;protein_id=WP_235409901.1;transl_table=11 ##sequence-region NZ_JAIKUA010000063.1 1 229 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000063.1 RefSeq region 1 229 . + . ID=NZ_JAIKUA010000063.1:1..229;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000063.1 RefSeq gene 1 229 . - . ID=gene-L2557_RS05435;Name=L2557_RS05435;end_range=229,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05435;partial=true;start_range=.,1 NZ_JAIKUA010000063.1 Protein Homology CDS 1 229 . - 1 ID=cds-WP_459559364.1;Parent=gene-L2557_RS05435;Dbxref=GenBank:WP_459559364.1;Name=WP_459559364.1;end_range=229,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF049694.1;locus_tag=L2557_RS05435;partial=true;product=T6SS immunity protein Tli3 family protein;protein_id=WP_459559364.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000064.1 1 634 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000064.1 RefSeq region 1 634 . + . ID=NZ_JAIKUA010000064.1:1..634;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000064.1 RefSeq gene 1 390 . + . ID=gene-L2557_RS05440;Name=L2557_RS05440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05440;partial=true;start_range=.,1 NZ_JAIKUA010000064.1 GeneMarkS-2+ CDS 1 390 . + 0 ID=cds-WP_235409902.1;Parent=gene-L2557_RS05440;Dbxref=GenBank:WP_235409902.1;Name=WP_235409902.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS05440;partial=true;product=hypothetical protein;protein_id=WP_235409902.1;start_range=.,1;transl_table=11 ##sequence-region NZ_JAIKUA010000065.1 1 22748 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000065.1 RefSeq region 1 22748 . + . ID=NZ_JAIKUA010000065.1:1..22748;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000065.1 RefSeq gene 613 1812 . + . ID=gene-L2557_RS05445;Name=L2557_RS05445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05445 NZ_JAIKUA010000065.1 Protein Homology CDS 613 1812 . + 0 ID=cds-WP_223672539.1;Parent=gene-L2557_RS05445;Dbxref=GenBank:WP_223672539.1;Name=WP_223672539.1;Ontology_term=GO:0015288,GO:0009279,GO:0016020;gbkey=CDS;go_component=cell outer membrane|0009279||IEA,membrane|0016020||IEA;go_function=porin activity|0015288||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628253.1;locus_tag=L2557_RS05445;product=porin;protein_id=WP_223672539.1;transl_table=11 NZ_JAIKUA010000065.1 RefSeq gene 1896 3851 . + . ID=gene-L2557_RS05450;Name=L2557_RS05450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05450 NZ_JAIKUA010000065.1 Protein Homology CDS 1896 3851 . + 0 ID=cds-WP_075673990.1;Parent=gene-L2557_RS05450;Dbxref=GenBank:WP_075673990.1;Name=WP_075673990.1;Ontology_term=GO:0009166,GO:0000166,GO:0008663,GO:0016788;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase activity|0008663||IEA,hydrolase activity%2C acting on ester bonds|0016788||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827381.1;locus_tag=L2557_RS05450;product=bifunctional 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;protein_id=WP_075673990.1;transl_table=11 NZ_JAIKUA010000065.1 RefSeq gene 3939 4715 . + . ID=gene-L2557_RS05455;Name=L2557_RS05455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05455 NZ_JAIKUA010000065.1 Protein Homology CDS 3939 4715 . + 0 ID=cds-WP_075673989.1;Parent=gene-L2557_RS05455;Dbxref=GenBank:WP_075673989.1;Name=WP_075673989.1;Ontology_term=GO:0003723,GO:0033897;gbkey=CDS;go_function=RNA binding|0003723||IEA,ribonuclease T2 activity|0033897||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367448.1;locus_tag=L2557_RS05455;product=ribonuclease T2 family protein;protein_id=WP_075673989.1;transl_table=11 NZ_JAIKUA010000065.1 RefSeq gene 4735 6357 . + . ID=gene-L2557_RS05460;Name=L2557_RS05460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05460 NZ_JAIKUA010000065.1 Protein Homology CDS 4735 6357 . + 0 ID=cds-WP_075673988.1;Parent=gene-L2557_RS05460;Dbxref=GenBank:WP_075673988.1;Name=WP_075673988.1;Ontology_term=GO:0009166,GO:0000166,GO:0008253,GO:0042578,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,5'-nucleotidase activity|0008253||IEA,phosphoric ester hydrolase activity|0042578||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245168.1;locus_tag=L2557_RS05460;product=bifunctional metallophosphatase/5'-nucleotidase;protein_id=WP_075673988.1;transl_table=11 NZ_JAIKUA010000065.1 RefSeq gene 6618 7217 . - . ID=gene-L2557_RS05465;Name=L2557_RS05465;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05465 NZ_JAIKUA010000065.1 Protein Homology CDS 6618 7217 . - 0 ID=cds-WP_075673987.1;Parent=gene-L2557_RS05465;Dbxref=GenBank:WP_075673987.1;Name=WP_075673987.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367449.1;locus_tag=L2557_RS05465;product=nitroreductase family protein;protein_id=WP_075673987.1;transl_table=11 NZ_JAIKUA010000065.1 RefSeq gene 7349 11077 . - . ID=gene-L2557_RS05470;Name=L2557_RS05470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05470 NZ_JAIKUA010000065.1 Protein Homology CDS 7349 11077 . - 0 ID=cds-WP_099659980.1;Parent=gene-L2557_RS05470;Dbxref=GenBank:WP_099659980.1;Name=WP_099659980.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827383.1;locus_tag=L2557_RS05470;product=SbcC/MukB-like Walker B domain-containing protein;protein_id=WP_099659980.1;transl_table=11 NZ_JAIKUA010000065.1 RefSeq gene 11077 12306 . - . ID=gene-L2557_RS05475;Name=sbcD;gbkey=Gene;gene=sbcD;gene_biotype=protein_coding;locus_tag=L2557_RS05475 NZ_JAIKUA010000065.1 Protein Homology CDS 11077 12306 . - 0 ID=cds-WP_223673851.1;Parent=gene-L2557_RS05475;Dbxref=GenBank:WP_223673851.1;Name=WP_223673851.1;Ontology_term=GO:0006260,GO:0006310,GO:0004527;gbkey=CDS;gene=sbcD;go_function=exonuclease activity|0004527||IEA;go_process=DNA replication|0006260||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249003.1;locus_tag=L2557_RS05475;product=exonuclease subunit SbcD;protein_id=WP_223673851.1;transl_table=11 NZ_JAIKUA010000065.1 RefSeq gene 12527 13216 . + . ID=gene-L2557_RS05480;Name=phoB;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=L2557_RS05480 NZ_JAIKUA010000065.1 Protein Homology CDS 12527 13216 . + 0 ID=cds-WP_075673984.1;Parent=gene-L2557_RS05480;Dbxref=GenBank:WP_075673984.1;Name=WP_075673984.1;Ontology_term=GO:0000160,GO:0006355,GO:0006817,GO:0000156,GO:0003677;gbkey=CDS;gene=phoB;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphate ion transport|0006817||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000113934.1;locus_tag=L2557_RS05480;product=phosphate regulon transcriptional regulator PhoB;protein_id=WP_075673984.1;transl_table=11 NZ_JAIKUA010000065.1 RefSeq gene 13240 14541 . + . ID=gene-L2557_RS05485;Name=phoR;gbkey=Gene;gene=phoR;gene_biotype=protein_coding;locus_tag=L2557_RS05485 NZ_JAIKUA010000065.1 Protein Homology CDS 13240 14541 . + 0 ID=cds-WP_075673983.1;Parent=gene-L2557_RS05485;Dbxref=GenBank:WP_075673983.1;Name=WP_075673983.1;Ontology_term=GO:0000160,GO:0006355,GO:0016310,GO:0000155,GO:0004721,GO:0016020;gbkey=CDS;gene=phoR;go_component=membrane|0016020||IEA;go_function=phosphorelay sensor kinase activity|0000155||IEA,phosphoprotein phosphatase activity|0004721||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245160.1;locus_tag=L2557_RS05485;product=phosphate regulon sensor histidine kinase PhoR;protein_id=WP_075673983.1;transl_table=11 NZ_JAIKUA010000065.1 RefSeq gene 15019 16362 . + . ID=gene-L2557_RS05490;Name=brnQ;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=L2557_RS05490 NZ_JAIKUA010000065.1 Protein Homology CDS 15019 16362 . + 0 ID=cds-WP_075673982.1;Parent=gene-L2557_RS05490;Dbxref=GenBank:WP_075673982.1;Name=WP_075673982.1;Ontology_term=GO:0015803,GO:0015658,GO:0016020;gbkey=CDS;gene=brnQ;go_component=membrane|0016020||IEA;go_function=branched-chain amino acid transmembrane transporter activity|0015658||IEA;go_process=branched-chain amino acid transport|0015803||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245159.1;locus_tag=L2557_RS05490;product=branched-chain amino acid transport system II carrier protein;protein_id=WP_075673982.1;transl_table=11 NZ_JAIKUA010000065.1 RefSeq gene 16432 17400 . - . ID=gene-L2557_RS05495;Name=ydhT;gbkey=Gene;gene=ydhT;gene_biotype=protein_coding;locus_tag=L2557_RS05495 NZ_JAIKUA010000065.1 Protein Homology CDS 16432 17400 . - 0 ID=cds-WP_075673981.1;Parent=gene-L2557_RS05495;Dbxref=GenBank:WP_075673981.1;Name=WP_075673981.1;gbkey=CDS;gene=ydhT;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252597.1;locus_tag=L2557_RS05495;product=protein YdhT;protein_id=WP_075673981.1;transl_table=11 NZ_JAIKUA010000065.1 RefSeq gene 17426 18223 . - . ID=gene-L2557_RS05500;Name=phsC;gbkey=Gene;gene=phsC;gene_biotype=protein_coding;locus_tag=L2557_RS05500 NZ_JAIKUA010000065.1 Protein Homology CDS 17426 18223 . - 0 ID=cds-WP_075673980.1;Parent=gene-L2557_RS05500;Dbxref=GenBank:WP_075673980.1;Name=WP_075673980.1;gbkey=CDS;gene=phsC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247202.1;locus_tag=L2557_RS05500;product=thiosulfate reductase cytochrome B subunit;protein_id=WP_075673980.1;transl_table=11 NZ_JAIKUA010000065.1 RefSeq gene 18220 18891 . - . ID=gene-L2557_RS05505;Name=L2557_RS05505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05505 NZ_JAIKUA010000065.1 Protein Homology CDS 18220 18891 . - 0 ID=cds-WP_075673979.1;Parent=gene-L2557_RS05505;Dbxref=GenBank:WP_075673979.1;Name=WP_075673979.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001529207.1;locus_tag=L2557_RS05505;product=4Fe-4S dicluster domain-containing protein;protein_id=WP_075673979.1;transl_table=11 NZ_JAIKUA010000065.1 RefSeq gene 18958 19671 . - . ID=gene-L2557_RS05510;Name=L2557_RS05510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05510 NZ_JAIKUA010000065.1 Protein Homology CDS 18958 19671 . - 0 ID=cds-WP_223673853.1;Parent=gene-L2557_RS05510;Dbxref=GenBank:WP_223673853.1;Name=WP_223673853.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247204.1;locus_tag=L2557_RS05510;product=YdhW family putative oxidoreductase system protein;protein_id=WP_223673853.1;transl_table=11 NZ_JAIKUA010000065.1 RefSeq gene 19694 21796 . - . ID=gene-L2557_RS05515;Name=L2557_RS05515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05515 NZ_JAIKUA010000065.1 Protein Homology CDS 19694 21796 . - 0 ID=cds-WP_075673977.1;Parent=gene-L2557_RS05515;Dbxref=GenBank:WP_075673977.1;Name=WP_075673977.1;Ontology_term=GO:0009055,GO:0016491,GO:0051536;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,oxidoreductase activity|0016491||IEA,iron-sulfur cluster binding|0051536||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_416188.1;locus_tag=L2557_RS05515;product=aldehyde ferredoxin oxidoreductase;protein_id=WP_075673977.1;transl_table=11 NZ_JAIKUA010000065.1 RefSeq gene 21848 22477 . - . ID=gene-L2557_RS05520;Name=L2557_RS05520;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05520 NZ_JAIKUA010000065.1 Protein Homology CDS 21848 22477 . - 0 ID=cds-WP_006535141.1;Parent=gene-L2557_RS05520;Dbxref=GenBank:WP_006535141.1;Name=WP_006535141.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535141.1;locus_tag=L2557_RS05520;product=ferredoxin-like protein;protein_id=WP_006535141.1;transl_table=11 ##sequence-region NZ_JAIKUA010000066.1 1 15019 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000066.1 RefSeq region 1 15019 . + . ID=NZ_JAIKUA010000066.1:1..15019;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000066.1 RefSeq gene 301 678 . + . ID=gene-L2557_RS05525;Name=secE;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=L2557_RS05525 NZ_JAIKUA010000066.1 Protein Homology CDS 301 678 . + 0 ID=cds-WP_006534701.1;Parent=gene-L2557_RS05525;Dbxref=GenBank:WP_006534701.1;Name=WP_006534701.1;gbkey=CDS;gene=secE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534701.1;locus_tag=L2557_RS05525;product=preprotein translocase subunit SecE;protein_id=WP_006534701.1;transl_table=11 NZ_JAIKUA010000066.1 RefSeq gene 686 1231 . + . ID=gene-L2557_RS05530;Name=nusG;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=L2557_RS05530 NZ_JAIKUA010000066.1 Protein Homology CDS 686 1231 . + 0 ID=cds-WP_004246900.1;Parent=gene-L2557_RS05530;Dbxref=GenBank:WP_004246900.1;Name=WP_004246900.1;Ontology_term=GO:0032784;gbkey=CDS;gene=nusG;go_process=regulation of DNA-templated transcription elongation|0032784||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004953928.1;locus_tag=L2557_RS05530;product=transcription termination/antitermination protein NusG;protein_id=WP_004246900.1;transl_table=11 NZ_JAIKUA010000066.1 RefSeq gene 1378 1806 . + . ID=gene-L2557_RS05535;Name=rplK;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=L2557_RS05535 NZ_JAIKUA010000066.1 Protein Homology CDS 1378 1806 . + 0 ID=cds-WP_075673745.1;Parent=gene-L2557_RS05535;Dbxref=GenBank:WP_075673745.1;Name=WP_075673745.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplK;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006121495.1;locus_tag=L2557_RS05535;product=50S ribosomal protein L11;protein_id=WP_075673745.1;transl_table=11 NZ_JAIKUA010000066.1 RefSeq gene 1811 2512 . + . ID=gene-L2557_RS05540;Name=rplA;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=L2557_RS05540 NZ_JAIKUA010000066.1 Protein Homology CDS 1811 2512 . + 0 ID=cds-WP_075673746.1;Parent=gene-L2557_RS05540;Dbxref=GenBank:WP_075673746.1;Name=WP_075673746.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0015934;gbkey=CDS;gene=rplA;go_component=large ribosomal subunit|0015934||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246903.1;locus_tag=L2557_RS05540;product=50S ribosomal protein L1;protein_id=WP_075673746.1;transl_table=11 NZ_JAIKUA010000066.1 RefSeq gene 2839 3336 . + . ID=gene-L2557_RS05545;Name=rplJ;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=L2557_RS05545 NZ_JAIKUA010000066.1 Protein Homology CDS 2839 3336 . + 0 ID=cds-WP_006534706.1;Parent=gene-L2557_RS05545;Dbxref=GenBank:WP_006534706.1;Name=WP_006534706.1;Ontology_term=GO:0006412,GO:0003735,GO:0015934;gbkey=CDS;gene=rplJ;go_component=large ribosomal subunit|0015934||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002438625.1;locus_tag=L2557_RS05545;product=50S ribosomal protein L10;protein_id=WP_006534706.1;transl_table=11 NZ_JAIKUA010000066.1 RefSeq gene 3400 3765 . + . ID=gene-L2557_RS05550;Name=rplL;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=L2557_RS05550 NZ_JAIKUA010000066.1 Protein Homology CDS 3400 3765 . + 0 ID=cds-WP_075673747.1;Parent=gene-L2557_RS05550;Dbxref=GenBank:WP_075673747.1;Name=WP_075673747.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rplL;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1;locus_tag=L2557_RS05550;product=50S ribosomal protein L7/L12;protein_id=WP_075673747.1;transl_table=11 NZ_JAIKUA010000066.1 RefSeq gene 4117 8145 . + . ID=gene-L2557_RS05555;Name=rpoB;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=L2557_RS05555 NZ_JAIKUA010000066.1 Protein Homology CDS 4117 8145 . + 0 ID=cds-WP_075673748.1;Parent=gene-L2557_RS05555;Dbxref=GenBank:WP_075673748.1;Name=WP_075673748.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoB;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004870488.1;locus_tag=L2557_RS05555;product=DNA-directed RNA polymerase subunit beta;protein_id=WP_075673748.1;transl_table=11 NZ_JAIKUA010000066.1 RefSeq gene 8268 12494 . + . ID=gene-L2557_RS05560;Name=rpoC;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=L2557_RS05560 NZ_JAIKUA010000066.1 Protein Homology CDS 8268 12494 . + 0 ID=cds-WP_099660135.1;Parent=gene-L2557_RS05560;Dbxref=GenBank:WP_099660135.1;Name=WP_099660135.1;Ontology_term=GO:0006351,GO:0003677,GO:0003899;gbkey=CDS;gene=rpoC;go_function=DNA binding|0003677||IEA,DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA-templated transcription|0006351||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242303.1;locus_tag=L2557_RS05560;product=DNA-directed RNA polymerase subunit beta';protein_id=WP_099660135.1;transl_table=11 NZ_JAIKUA010000066.1 RefSeq gene 12574 13929 . + . ID=gene-L2557_RS05565;Name=L2557_RS05565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05565 NZ_JAIKUA010000066.1 Protein Homology CDS 12574 13929 . + 0 ID=cds-WP_235409903.1;Parent=gene-L2557_RS05565;Dbxref=GenBank:WP_235409903.1;Name=WP_235409903.1;Ontology_term=GO:0005975,GO:0016810;gbkey=CDS;go_function=hydrolase activity%2C acting on carbon-nitrogen (but not peptide) bonds|0016810||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534712.1;locus_tag=L2557_RS05565;product=polysaccharide deacetylase family protein;protein_id=WP_235409903.1;transl_table=11 NZ_JAIKUA010000066.1 RefSeq pseudogene 14120 15019 . + . ID=gene-L2557_RS05570;Name=L2557_RS05570;end_range=15019,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS05570;partial=true;pseudo=true NZ_JAIKUA010000066.1 Protein Homology CDS 14120 15019 . + 0 ID=cds-L2557_RS05570;Parent=gene-L2557_RS05570;Note=internal stop%3B incomplete%3B missing C-terminus;end_range=15019,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016629.6;locus_tag=L2557_RS05570;partial=true;product=Rpn family recombination-promoting nuclease/putative transposase;pseudo=true;transl_table=11 ##sequence-region NZ_JAIKUA010000067.1 1 27109 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000067.1 RefSeq region 1 27109 . + . ID=NZ_JAIKUA010000067.1:1..27109;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000067.1 RefSeq gene 74 667 . + . ID=gene-L2557_RS05575;Name=L2557_RS05575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05575 NZ_JAIKUA010000067.1 Protein Homology CDS 74 667 . + 0 ID=cds-WP_235409904.1;Parent=gene-L2557_RS05575;Dbxref=GenBank:WP_235409904.1;Name=WP_235409904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014658129.1;locus_tag=L2557_RS05575;product=DUF1367 family protein;protein_id=WP_235409904.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 679 990 . + . ID=gene-L2557_RS05580;Name=L2557_RS05580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05580 NZ_JAIKUA010000067.1 Protein Homology CDS 679 990 . + 0 ID=cds-WP_109372824.1;Parent=gene-L2557_RS05580;Dbxref=GenBank:WP_109372824.1;Name=WP_109372824.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250550.1;locus_tag=L2557_RS05580;product=Ref family recombination enhancement nuclease;protein_id=WP_109372824.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 978 1511 . + . ID=gene-L2557_RS05585;Name=L2557_RS05585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05585 NZ_JAIKUA010000067.1 Protein Homology CDS 978 1511 . + 0 ID=cds-WP_161669535.1;Parent=gene-L2557_RS05585;Dbxref=GenBank:WP_161669535.1;Name=WP_161669535.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250553.1;locus_tag=L2557_RS05585;product=antiterminator Q family protein;protein_id=WP_161669535.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 1674 1871 . + . ID=gene-L2557_RS05590;Name=L2557_RS05590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05590 NZ_JAIKUA010000067.1 Protein Homology CDS 1674 1871 . + 0 ID=cds-WP_109372826.1;Parent=gene-L2557_RS05590;Dbxref=GenBank:WP_109372826.1;Name=WP_109372826.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001353802.1;locus_tag=L2557_RS05590;product=TrmB family transcriptional regulator;protein_id=WP_109372826.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 2014 3066 . + . ID=gene-L2557_RS05595;Name=L2557_RS05595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05595 NZ_JAIKUA010000067.1 Protein Homology CDS 2014 3066 . + 0 ID=cds-WP_235409905.1;Parent=gene-L2557_RS05595;Dbxref=GenBank:WP_235409905.1;Name=WP_235409905.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814762.1;locus_tag=L2557_RS05595;product=DNA-methyltransferase;protein_id=WP_235409905.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 3121 3435 . + . ID=gene-L2557_RS05600;Name=L2557_RS05600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05600 NZ_JAIKUA010000067.1 Protein Homology CDS 3121 3435 . + 0 ID=cds-WP_306666608.1;Parent=gene-L2557_RS05600;Dbxref=GenBank:WP_306666608.1;Name=WP_306666608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368194.1;locus_tag=L2557_RS05600;product=phage holin family protein;protein_id=WP_306666608.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 3467 3820 . + . ID=gene-L2557_RS05605;Name=L2557_RS05605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05605 NZ_JAIKUA010000067.1 Protein Homology CDS 3467 3820 . + 0 ID=cds-WP_235409926.1;Parent=gene-L2557_RS05605;Dbxref=GenBank:WP_235409926.1;Name=WP_235409926.1;Ontology_term=GO:0071554,GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;go_process=cell wall organization or biogenesis|0071554||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000072320.1;locus_tag=L2557_RS05605;product=M15 family metallopeptidase;protein_id=WP_235409926.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 3826 4272 . + . ID=gene-L2557_RS05610;Name=L2557_RS05610;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05610 NZ_JAIKUA010000067.1 Protein Homology CDS 3826 4272 . + 0 ID=cds-WP_235409906.1;Parent=gene-L2557_RS05610;Dbxref=GenBank:WP_235409906.1;Name=WP_235409906.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006660342.1;locus_tag=L2557_RS05610;product=lysis protein;protein_id=WP_235409906.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 4505 4969 . + . ID=gene-L2557_RS05615;Name=L2557_RS05615;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05615 NZ_JAIKUA010000067.1 GeneMarkS-2+ CDS 4505 4969 . + 0 ID=cds-WP_235409907.1;Parent=gene-L2557_RS05615;Dbxref=GenBank:WP_235409907.1;Name=WP_235409907.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS05615;product=J domain-containing protein;protein_id=WP_235409907.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 5056 6072 . + . ID=gene-L2557_RS05620;Name=L2557_RS05620;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05620 NZ_JAIKUA010000067.1 Protein Homology CDS 5056 6072 . + 0 ID=cds-WP_235409908.1;Parent=gene-L2557_RS05620;Dbxref=GenBank:WP_235409908.1;Name=WP_235409908.1;Ontology_term=GO:0051276,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=chromosome organization|0051276||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814755.1;locus_tag=L2557_RS05620;product=terminase small subunit;protein_id=WP_235409908.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 6205 7068 . + . ID=gene-L2557_RS05625;Name=L2557_RS05625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05625 NZ_JAIKUA010000067.1 Protein Homology CDS 6205 7068 . + 0 ID=cds-WP_196579725.1;Parent=gene-L2557_RS05625;Dbxref=GenBank:WP_196579725.1;Name=WP_196579725.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF025027.6;locus_tag=L2557_RS05625;product=DUF4145 domain-containing protein;protein_id=WP_196579725.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 7133 8530 . + . ID=gene-L2557_RS05630;Name=terL;gbkey=Gene;gene=terL;gene_biotype=protein_coding;locus_tag=L2557_RS05630 NZ_JAIKUA010000067.1 Protein Homology CDS 7133 8530 . + 0 ID=cds-WP_235409909.1;Parent=gene-L2557_RS05630;Dbxref=GenBank:WP_235409909.1;Name=WP_235409909.1;gbkey=CDS;gene=terL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250569.1;locus_tag=L2557_RS05630;product=phage terminase large subunit;protein_id=WP_235409909.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 8534 10036 . + . ID=gene-L2557_RS05635;Name=L2557_RS05635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05635 NZ_JAIKUA010000067.1 Protein Homology CDS 8534 10036 . + 0 ID=cds-WP_235409910.1;Parent=gene-L2557_RS05635;Dbxref=GenBank:WP_235409910.1;Name=WP_235409910.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814753.1;locus_tag=L2557_RS05635;product=phage portal protein;protein_id=WP_235409910.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 10053 10787 . + . ID=gene-L2557_RS05640;Name=L2557_RS05640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05640 NZ_JAIKUA010000067.1 Protein Homology CDS 10053 10787 . + 0 ID=cds-WP_235409911.1;Parent=gene-L2557_RS05640;Dbxref=GenBank:WP_235409911.1;Name=WP_235409911.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006661488.1;locus_tag=L2557_RS05640;product=phage head morphogenesis protein;protein_id=WP_235409911.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 10784 12043 . + . ID=gene-L2557_RS05645;Name=L2557_RS05645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05645 NZ_JAIKUA010000067.1 Protein Homology CDS 10784 12043 . + 0 ID=cds-WP_235409912.1;Parent=gene-L2557_RS05645;Dbxref=GenBank:WP_235409912.1;Name=WP_235409912.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250574.1;locus_tag=L2557_RS05645;product=DUF2213 domain-containing protein;protein_id=WP_235409912.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 12043 12540 . + . ID=gene-L2557_RS05650;Name=L2557_RS05650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05650 NZ_JAIKUA010000067.1 Protein Homology CDS 12043 12540 . + 0 ID=cds-WP_235409913.1;Parent=gene-L2557_RS05650;Dbxref=GenBank:WP_235409913.1;Name=WP_235409913.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533514.1;locus_tag=L2557_RS05650;product=structural cement protein Gp24;protein_id=WP_235409913.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 12540 13607 . + . ID=gene-L2557_RS05655;Name=L2557_RS05655;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05655 NZ_JAIKUA010000067.1 Protein Homology CDS 12540 13607 . + 0 ID=cds-WP_235409914.1;Parent=gene-L2557_RS05655;Dbxref=GenBank:WP_235409914.1;Name=WP_235409914.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533513.1;locus_tag=L2557_RS05655;product=major capsid family protein;protein_id=WP_235409914.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 13677 14018 . + . ID=gene-L2557_RS05660;Name=L2557_RS05660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05660 NZ_JAIKUA010000067.1 Protein Homology CDS 13677 14018 . + 0 ID=cds-WP_080047798.1;Parent=gene-L2557_RS05660;Dbxref=GenBank:WP_080047798.1;Name=WP_080047798.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_016192074.1;locus_tag=L2557_RS05660;product=hypothetical protein;protein_id=WP_080047798.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 14020 14451 . + . ID=gene-L2557_RS05665;Name=L2557_RS05665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05665 NZ_JAIKUA010000067.1 Protein Homology CDS 14020 14451 . + 0 ID=cds-WP_099660761.1;Parent=gene-L2557_RS05665;Dbxref=GenBank:WP_099660761.1;Name=WP_099660761.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250580.1;locus_tag=L2557_RS05665;product=DUF4054 domain-containing protein;protein_id=WP_099660761.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 14451 14909 . + . ID=gene-L2557_RS05670;Name=L2557_RS05670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05670 NZ_JAIKUA010000067.1 Protein Homology CDS 14451 14909 . + 0 ID=cds-WP_223673540.1;Parent=gene-L2557_RS05670;Dbxref=GenBank:WP_223673540.1;Name=WP_223673540.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250581.1;locus_tag=L2557_RS05670;product=hypothetical protein;protein_id=WP_223673540.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 14909 15280 . + . ID=gene-L2557_RS05675;Name=L2557_RS05675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05675 NZ_JAIKUA010000067.1 Protein Homology CDS 14909 15280 . + 0 ID=cds-WP_196560525.1;Parent=gene-L2557_RS05675;Dbxref=GenBank:WP_196560525.1;Name=WP_196560525.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533508.1;locus_tag=L2557_RS05675;product=phage collar protein;protein_id=WP_196560525.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 15267 15782 . + . ID=gene-L2557_RS05680;Name=L2557_RS05680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05680 NZ_JAIKUA010000067.1 Protein Homology CDS 15267 15782 . + 0 ID=cds-WP_235409915.1;Parent=gene-L2557_RS05680;Dbxref=GenBank:WP_235409915.1;Name=WP_235409915.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004240339.1;locus_tag=L2557_RS05680;product=phage gateway protein;protein_id=WP_235409915.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 15791 17278 . + . ID=gene-L2557_RS05685;Name=L2557_RS05685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05685 NZ_JAIKUA010000067.1 Protein Homology CDS 15791 17278 . + 0 ID=cds-WP_235409916.1;Parent=gene-L2557_RS05685;Dbxref=GenBank:WP_235409916.1;Name=WP_235409916.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368089.1;locus_tag=L2557_RS05685;product=DUF3383 domain-containing protein;protein_id=WP_235409916.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 17289 17741 . + . ID=gene-L2557_RS05690;Name=L2557_RS05690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05690 NZ_JAIKUA010000067.1 Protein Homology CDS 17289 17741 . + 0 ID=cds-WP_235409917.1;Parent=gene-L2557_RS05690;Dbxref=GenBank:WP_235409917.1;Name=WP_235409917.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368088.1;locus_tag=L2557_RS05690;product=phage tail fiber protein;protein_id=WP_235409917.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 17781 18239 . + . ID=gene-L2557_RS05695;Name=L2557_RS05695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05695 NZ_JAIKUA010000067.1 Protein Homology CDS 17781 18239 . + 0 ID=cds-WP_004250588.1;Parent=gene-L2557_RS05695;Dbxref=GenBank:WP_004250588.1;Name=WP_004250588.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250588.1;locus_tag=L2557_RS05695;product=hypothetical protein;protein_id=WP_004250588.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 18323 20614 . + . ID=gene-L2557_RS05700;Name=L2557_RS05700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05700 NZ_JAIKUA010000067.1 Protein Homology CDS 18323 20614 . + 0 ID=cds-WP_235409918.1;Parent=gene-L2557_RS05700;Dbxref=GenBank:WP_235409918.1;Name=WP_235409918.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814741.1;locus_tag=L2557_RS05700;product=hypothetical protein;protein_id=WP_235409918.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 20611 21138 . + . ID=gene-L2557_RS05705;Name=L2557_RS05705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05705 NZ_JAIKUA010000067.1 Protein Homology CDS 20611 21138 . + 0 ID=cds-WP_196729238.1;Parent=gene-L2557_RS05705;Dbxref=GenBank:WP_196729238.1;Name=WP_196729238.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250592.1;locus_tag=L2557_RS05705;product=phage baseplate protein;protein_id=WP_196729238.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 21138 21455 . + . ID=gene-L2557_RS05710;Name=L2557_RS05710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05710 NZ_JAIKUA010000067.1 Protein Homology CDS 21138 21455 . + 0 ID=cds-WP_235409919.1;Parent=gene-L2557_RS05710;Dbxref=GenBank:WP_235409919.1;Name=WP_235409919.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250595.1;locus_tag=L2557_RS05710;product=phage baseplate plug family protein;protein_id=WP_235409919.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 21424 22236 . + . ID=gene-L2557_RS05715;Name=L2557_RS05715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05715 NZ_JAIKUA010000067.1 Protein Homology CDS 21424 22236 . + 0 ID=cds-WP_235409920.1;Parent=gene-L2557_RS05715;Dbxref=GenBank:WP_235409920.1;Name=WP_235409920.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243622.1;locus_tag=L2557_RS05715;product=baseplate hub protein;protein_id=WP_235409920.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 22239 22931 . + . ID=gene-L2557_RS05720;Name=L2557_RS05720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05720 NZ_JAIKUA010000067.1 Protein Homology CDS 22239 22931 . + 0 ID=cds-WP_235409921.1;Parent=gene-L2557_RS05720;Dbxref=GenBank:WP_235409921.1;Name=WP_235409921.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827849.1;locus_tag=L2557_RS05720;product=Gp138 family membrane-puncturing spike protein;protein_id=WP_235409921.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 22928 23272 . + . ID=gene-L2557_RS05725;Name=L2557_RS05725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05725 NZ_JAIKUA010000067.1 Protein Homology CDS 22928 23272 . + 0 ID=cds-WP_235409922.1;Parent=gene-L2557_RS05725;Dbxref=GenBank:WP_235409922.1;Name=WP_235409922.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243617.1;locus_tag=L2557_RS05725;product=hypothetical protein;protein_id=WP_235409922.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 23265 24452 . + . ID=gene-L2557_RS05730;Name=L2557_RS05730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05730 NZ_JAIKUA010000067.1 Protein Homology CDS 23265 24452 . + 0 ID=cds-WP_235409923.1;Parent=gene-L2557_RS05730;Dbxref=GenBank:WP_235409923.1;Name=WP_235409923.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004243616.1;locus_tag=L2557_RS05730;product=baseplate J/gp47 family protein;protein_id=WP_235409923.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 24449 25105 . + . ID=gene-L2557_RS05735;Name=L2557_RS05735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05735 NZ_JAIKUA010000067.1 Protein Homology CDS 24449 25105 . + 0 ID=cds-WP_235409924.1;Parent=gene-L2557_RS05735;Dbxref=GenBank:WP_235409924.1;Name=WP_235409924.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250603.1;locus_tag=L2557_RS05735;product=DUF2612 domain-containing protein;protein_id=WP_235409924.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 25111 26487 . + . ID=gene-L2557_RS05740;Name=L2557_RS05740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05740 NZ_JAIKUA010000067.1 Protein Homology CDS 25111 26487 . + 0 ID=cds-WP_235409925.1;Parent=gene-L2557_RS05740;Dbxref=GenBank:WP_235409925.1;Name=WP_235409925.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250613.1;locus_tag=L2557_RS05740;product=hypothetical protein;protein_id=WP_235409925.1;transl_table=11 NZ_JAIKUA010000067.1 RefSeq gene 26525 27094 . - . ID=gene-L2557_RS05745;Name=L2557_RS05745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05745 NZ_JAIKUA010000067.1 Protein Homology CDS 26525 27094 . - 0 ID=cds-WP_099660748.1;Parent=gene-L2557_RS05745;Dbxref=GenBank:WP_099660748.1;Name=WP_099660748.1;Ontology_term=GO:0006535,GO:0009001;gbkey=CDS;go_function=serine O-acetyltransferase activity|0009001||IEA;go_process=cysteine biosynthetic process from serine|0006535||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015698527.1;locus_tag=L2557_RS05745;product=serine O-acetyltransferase;protein_id=WP_099660748.1;transl_table=11 ##sequence-region NZ_JAIKUA010000068.1 1 9417 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000068.1 RefSeq region 1 9417 . + . ID=NZ_JAIKUA010000068.1:1..9417;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000068.1 RefSeq gene 1 1939 . + . ID=gene-L2557_RS05750;Name=bcsA;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=L2557_RS05750;partial=true;start_range=.,1 NZ_JAIKUA010000068.1 Protein Homology CDS 1 1939 . + 1 ID=cds-WP_235409927.1;Parent=gene-L2557_RS05750;Dbxref=GenBank:WP_235409927.1;Name=WP_235409927.1;Ontology_term=GO:0006011,GO:0030244,GO:0016759,GO:0035438;gbkey=CDS;gene=bcsA;go_function=cellulose synthase activity|0016759||IEA,cyclic-di-GMP binding|0035438||IEA;go_process=UDP-alpha-D-glucose metabolic process|0006011||IEA,cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017826970.1;locus_tag=L2557_RS05750;partial=true;product=UDP-forming cellulose synthase catalytic subunit;protein_id=WP_235409927.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000068.1 RefSeq gene 1942 4293 . + . ID=gene-L2557_RS05755;Name=bcsB;gbkey=Gene;gene=bcsB;gene_biotype=protein_coding;locus_tag=L2557_RS05755 NZ_JAIKUA010000068.1 Protein Homology CDS 1942 4293 . + 0 ID=cds-WP_235409928.1;Parent=gene-L2557_RS05755;Dbxref=GenBank:WP_235409928.1;Name=WP_235409928.1;gbkey=CDS;gene=bcsB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017826971.1;locus_tag=L2557_RS05755;product=cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB;protein_id=WP_235409928.1;transl_table=11 NZ_JAIKUA010000068.1 RefSeq gene 4307 8008 . + . ID=gene-L2557_RS05760;Name=L2557_RS05760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05760 NZ_JAIKUA010000068.1 Protein Homology CDS 4307 8008 . + 0 ID=cds-WP_075673740.1;Parent=gene-L2557_RS05760;Dbxref=GenBank:WP_075673740.1;Name=WP_075673740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249969.1;locus_tag=L2557_RS05760;product=cellulose biosynthesis protein BcsC;protein_id=WP_075673740.1;transl_table=11 NZ_JAIKUA010000068.1 RefSeq gene 8024 8494 . + . ID=gene-L2557_RS05765;Name=bcsD;gbkey=Gene;gene=bcsD;gene_biotype=protein_coding;locus_tag=L2557_RS05765 NZ_JAIKUA010000068.1 Protein Homology CDS 8024 8494 . + 0 ID=cds-WP_075673739.1;Parent=gene-L2557_RS05765;Dbxref=GenBank:WP_075673739.1;Name=WP_075673739.1;Ontology_term=GO:0030244;gbkey=CDS;gene=bcsD;go_process=cellulose biosynthetic process|0030244||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246549.1;locus_tag=L2557_RS05765;product=cellulose biosynthesis protein BcsD;protein_id=WP_075673739.1;transl_table=11 NZ_JAIKUA010000068.1 RefSeq gene 8534 9417 . + . ID=gene-L2557_RS05770;Name=L2557_RS05770;end_range=9417,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05770;partial=true NZ_JAIKUA010000068.1 Protein Homology CDS 8534 9417 . + 0 ID=cds-WP_235409929.1;Parent=gene-L2557_RS05770;Dbxref=GenBank:WP_235409929.1;Name=WP_235409929.1;Ontology_term=GO:0009966,GO:0009975;end_range=9417,.;gbkey=CDS;go_function=cyclase activity|0009975||IEA;go_process=regulation of signal transduction|0009966||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246548.1;locus_tag=L2557_RS05770;partial=true;product=sensor domain-containing diguanylate cyclase;protein_id=WP_235409929.1;transl_table=11 ##sequence-region NZ_JAIKUA010000069.1 1 1674 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000069.1 RefSeq region 1 1674 . + . ID=NZ_JAIKUA010000069.1:1..1674;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000069.1 RefSeq gene 1 1471 . - . ID=gene-L2557_RS05775;Name=L2557_RS05775;gbkey=Gene;gene_biotype=rRNA;locus_tag=L2557_RS05775;partial=true;start_range=.,1 NZ_JAIKUA010000069.1 cmsearch rRNA 1 1471 . - . ID=rna-L2557_RS05775;Parent=gene-L2557_RS05775;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=L2557_RS05775;partial=true;product=16S ribosomal RNA;start_range=.,1 NZ_JAIKUA010000069.1 cmsearch exon 1 1471 . - . ID=exon-L2557_RS05775-1;Parent=rna-L2557_RS05775;Dbxref=RFAM:RF00177;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=L2557_RS05775;partial=true;product=16S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JAIKUA010000007.1 1 4217 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000007.1 RefSeq region 1 4217 . + . ID=NZ_JAIKUA010000007.1:1..4217;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000007.1 RefSeq gene 231 1682 . + . ID=gene-L2557_RS00590;Name=L2557_RS00590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00590 NZ_JAIKUA010000007.1 Protein Homology CDS 231 1682 . + 0 ID=cds-WP_075674341.1;Parent=gene-L2557_RS00590;Dbxref=GenBank:WP_075674341.1;Name=WP_075674341.1;Ontology_term=GO:0009116,GO:0044209,GO:0008714;gbkey=CDS;go_function=AMP nucleosidase activity|0008714||IEA;go_process=nucleoside metabolic process|0009116||IEA,AMP salvage|0044209||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013649896.1;locus_tag=L2557_RS00590;product=AMP nucleosidase;protein_id=WP_075674341.1;transl_table=11 NZ_JAIKUA010000007.1 RefSeq gene 1774 2766 . - . ID=gene-L2557_RS00595;Name=L2557_RS00595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00595 NZ_JAIKUA010000007.1 Protein Homology CDS 1774 2766 . - 0 ID=cds-WP_099660386.1;Parent=gene-L2557_RS00595;Dbxref=GenBank:WP_099660386.1;Name=WP_099660386.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367910.1;locus_tag=L2557_RS00595;product=tyrosine-type recombinase/integrase;protein_id=WP_099660386.1;transl_table=11 NZ_JAIKUA010000007.1 RefSeq gene 3096 4130 . - . ID=gene-L2557_RS00600;Name=L2557_RS00600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00600 NZ_JAIKUA010000007.1 Protein Homology CDS 3096 4130 . - 0 ID=cds-WP_191902079.1;Parent=gene-L2557_RS00600;Dbxref=GenBank:WP_191902079.1;Name=WP_191902079.1;Ontology_term=GO:0006508,GO:0004067,GO:0008798;gbkey=CDS;go_function=asparaginase activity|0004067||IEA,beta-aspartyl-peptidase activity|0008798||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827805.1;locus_tag=L2557_RS00600;product=isoaspartyl peptidase/L-asparaginase family protein;protein_id=WP_191902079.1;transl_table=11 ##sequence-region NZ_JAIKUA010000070.1 1 3215 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000070.1 RefSeq region 1 3215 . + . ID=NZ_JAIKUA010000070.1:1..3215;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000070.1 RefSeq gene 61 468 . - . ID=gene-L2557_RS05780;Name=panM;gbkey=Gene;gene=panM;gene_biotype=protein_coding;locus_tag=L2557_RS05780 NZ_JAIKUA010000070.1 Protein Homology CDS 61 468 . - 0 ID=cds-WP_075674165.1;Parent=gene-L2557_RS05780;Dbxref=GenBank:WP_075674165.1;Name=WP_075674165.1;Ontology_term=GO:0015940,GO:0031638,GO:0008080;gbkey=CDS;gene=panM;go_function=N-acetyltransferase activity|0008080||IEA;go_process=pantothenate biosynthetic process|0015940||IEA,zymogen activation|0031638||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368821.1;locus_tag=L2557_RS05780;product=aspartate 1-decarboxylase autocleavage activator PanM;protein_id=WP_075674165.1;transl_table=11 NZ_JAIKUA010000070.1 RefSeq gene 480 1667 . - . ID=gene-L2557_RS05785;Name=L2557_RS05785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05785 NZ_JAIKUA010000070.1 Protein Homology CDS 480 1667 . - 0 ID=cds-WP_099660027.1;Parent=gene-L2557_RS05785;Dbxref=GenBank:WP_099660027.1;Name=WP_099660027.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368822.1;locus_tag=L2557_RS05785;product=MFS transporter;protein_id=WP_099660027.1;transl_table=11 NZ_JAIKUA010000070.1 RefSeq gene 1781 2248 . + . ID=gene-L2557_RS05790;Name=L2557_RS05790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05790 NZ_JAIKUA010000070.1 Protein Homology CDS 1781 2248 . + 0 ID=cds-WP_099660026.1;Parent=gene-L2557_RS05790;Dbxref=GenBank:WP_099660026.1;Name=WP_099660026.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248884.1;locus_tag=L2557_RS05790;product=MarR family winged helix-turn-helix transcriptional regulator;protein_id=WP_099660026.1;transl_table=11 NZ_JAIKUA010000070.1 RefSeq gene 2302 3054 . - . ID=gene-L2557_RS05795;Name=loiP;gbkey=Gene;gene=loiP;gene_biotype=protein_coding;locus_tag=L2557_RS05795 NZ_JAIKUA010000070.1 Protein Homology CDS 2302 3054 . - 0 ID=cds-WP_075674168.1;Parent=gene-L2557_RS05795;Dbxref=GenBank:WP_075674168.1;Name=WP_075674168.1;Ontology_term=GO:0004222;gbkey=CDS;gene=loiP;go_function=metalloendopeptidase activity|0004222||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245378.1;locus_tag=L2557_RS05795;product=metalloprotease LoiP;protein_id=WP_075674168.1;transl_table=11 ##sequence-region NZ_JAIKUA010000071.1 1 12402 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000071.1 RefSeq region 1 12402 . + . ID=NZ_JAIKUA010000071.1:1..12402;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000071.1 RefSeq gene 69 521 . - . ID=gene-L2557_RS05800;Name=csdE;gbkey=Gene;gene=csdE;gene_biotype=protein_coding;locus_tag=L2557_RS05800 NZ_JAIKUA010000071.1 Protein Homology CDS 69 521 . - 0 ID=cds-WP_075671738.1;Parent=gene-L2557_RS05800;Dbxref=GenBank:WP_075671738.1;Name=WP_075671738.1;Ontology_term=GO:0016226,GO:0031071;gbkey=CDS;gene=csdE;go_function=cysteine desulfurase activity|0031071||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368310.1;locus_tag=L2557_RS05800;product=cysteine desulfurase sulfur acceptor subunit CsdE;protein_id=WP_075671738.1;transl_table=11 NZ_JAIKUA010000071.1 RefSeq gene 527 1738 . - . ID=gene-L2557_RS05805;Name=csdA;gbkey=Gene;gene=csdA;gene_biotype=protein_coding;locus_tag=L2557_RS05805 NZ_JAIKUA010000071.1 Protein Homology CDS 527 1738 . - 0 ID=cds-WP_099660194.1;Parent=gene-L2557_RS05805;Dbxref=GenBank:WP_099660194.1;Name=WP_099660194.1;Ontology_term=GO:0006534,GO:0016226,GO:0030170,GO:0031071;gbkey=CDS;gene=csdA;go_function=pyridoxal phosphate binding|0030170||IEA,cysteine desulfurase activity|0031071||IEA;go_process=cysteine metabolic process|0006534||IEA,iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010848591.1;locus_tag=L2557_RS05805;product=cysteine desulfurase CsdA;protein_id=WP_099660194.1;transl_table=11 NZ_JAIKUA010000071.1 RefSeq gene 2400 3320 . + . ID=gene-L2557_RS05810;Name=L2557_RS05810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05810 NZ_JAIKUA010000071.1 Protein Homology CDS 2400 3320 . + 0 ID=cds-WP_075671734.1;Parent=gene-L2557_RS05810;Dbxref=GenBank:WP_075671734.1;Name=WP_075671734.1;Ontology_term=GO:0006351,GO:0006355,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=DNA-templated transcription|0006351||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245498.1;locus_tag=L2557_RS05810;product=transcriptional regulator GcvA;protein_id=WP_075671734.1;transl_table=11 NZ_JAIKUA010000071.1 RefSeq gene 3364 3759 . + . ID=gene-L2557_RS05815;Name=L2557_RS05815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05815 NZ_JAIKUA010000071.1 Protein Homology CDS 3364 3759 . + 0 ID=cds-WP_075671732.1;Parent=gene-L2557_RS05815;Dbxref=GenBank:WP_075671732.1;Name=WP_075671732.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245496.1;locus_tag=L2557_RS05815;product=DUF423 domain-containing protein;protein_id=WP_075671732.1;transl_table=11 NZ_JAIKUA010000071.1 RefSeq gene 3752 4849 . + . ID=gene-L2557_RS05820;Name=rlmM;gbkey=Gene;gene=rlmM;gene_biotype=protein_coding;locus_tag=L2557_RS05820 NZ_JAIKUA010000071.1 Protein Homology CDS 3752 4849 . + 0 ID=cds-WP_235409930.1;Parent=gene-L2557_RS05820;Dbxref=GenBank:WP_235409930.1;Name=WP_235409930.1;Ontology_term=GO:0008168;gbkey=CDS;gene=rlmM;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245495.1;locus_tag=L2557_RS05820;product=23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM;protein_id=WP_235409930.1;transl_table=11 NZ_JAIKUA010000071.1 RefSeq gene 4984 5733 . - . ID=gene-L2557_RS05825;Name=xni;gbkey=Gene;gene=xni;gene_biotype=protein_coding;locus_tag=L2557_RS05825 NZ_JAIKUA010000071.1 Protein Homology CDS 4984 5733 . - 0 ID=cds-WP_075671728.1;Parent=gene-L2557_RS05825;Dbxref=GenBank:WP_075671728.1;Name=WP_075671728.1;Ontology_term=GO:0033567,GO:0003677,GO:0017108;gbkey=CDS;gene=xni;go_function=DNA binding|0003677||IEA,5'-flap endonuclease activity|0017108||IEA;go_process=DNA replication%2C Okazaki fragment processing|0033567||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245494.1;locus_tag=L2557_RS05825;product=flap endonuclease Xni;protein_id=WP_075671728.1;transl_table=11 NZ_JAIKUA010000071.1 RefSeq gene 5740 7107 . - . ID=gene-L2557_RS05830;Name=ppnN;gbkey=Gene;gene=ppnN;gene_biotype=protein_coding;locus_tag=L2557_RS05830 NZ_JAIKUA010000071.1 Protein Homology CDS 5740 7107 . - 0 ID=cds-WP_036913815.1;Parent=gene-L2557_RS05830;Dbxref=GenBank:WP_036913815.1;Name=WP_036913815.1;gbkey=CDS;gene=ppnN;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461889.1;locus_tag=L2557_RS05830;product=nucleotide 5'-monophosphate nucleosidase PpnN;protein_id=WP_036913815.1;transl_table=11 NZ_JAIKUA010000071.1 RefSeq gene 7199 8044 . - . ID=gene-L2557_RS05835;Name=queF;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=L2557_RS05835 NZ_JAIKUA010000071.1 Protein Homology CDS 7199 8044 . - 0 ID=cds-WP_099660192.1;Parent=gene-L2557_RS05835;Dbxref=GenBank:WP_099660192.1;Name=WP_099660192.1;Note=Catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;Ontology_term=GO:0008616,GO:0033739,GO:0043867;gbkey=CDS;gene=queF;go_function=preQ1 synthase activity|0033739||IEA,7-cyano-7-deazaguanine tRNA-ribosyltransferase activity|0043867||IEA;go_process=tRNA queuosine(34) biosynthetic process|0008616||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009486028.1;locus_tag=L2557_RS05835;product=NADPH-dependent 7-cyano-7-deazaguanine reductase QueF;protein_id=WP_099660192.1;transl_table=11 NZ_JAIKUA010000071.1 RefSeq gene 8201 8752 . + . ID=gene-L2557_RS05840;Name=syd;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=L2557_RS05840 NZ_JAIKUA010000071.1 Protein Homology CDS 8201 8752 . + 0 ID=cds-WP_109420102.1;Parent=gene-L2557_RS05840;Dbxref=GenBank:WP_109420102.1;Name=WP_109420102.1;Ontology_term=GO:0009898;gbkey=CDS;gene=syd;go_component=cytoplasmic side of plasma membrane|0009898||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535920.1;locus_tag=L2557_RS05840;product=SecY-interacting protein;protein_id=WP_109420102.1;transl_table=11 NZ_JAIKUA010000071.1 RefSeq gene 9219 9542 . + . ID=gene-L2557_RS05845;Name=L2557_RS05845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05845 NZ_JAIKUA010000071.1 Protein Homology CDS 9219 9542 . + 0 ID=cds-WP_075671722.1;Parent=gene-L2557_RS05845;Dbxref=GenBank:WP_075671722.1;Name=WP_075671722.1;Ontology_term=GO:0044010;gbkey=CDS;go_process=single-species biofilm formation|0044010||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004916805.1;locus_tag=L2557_RS05845;product=YqcC family protein;protein_id=WP_075671722.1;transl_table=11 NZ_JAIKUA010000071.1 RefSeq gene 9551 10315 . + . ID=gene-L2557_RS05850;Name=truC;gbkey=Gene;gene=truC;gene_biotype=protein_coding;locus_tag=L2557_RS05850 NZ_JAIKUA010000071.1 Protein Homology CDS 9551 10315 . + 0 ID=cds-WP_075671720.1;Parent=gene-L2557_RS05850;Dbxref=GenBank:WP_075671720.1;Name=WP_075671720.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=truC;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628584.1;locus_tag=L2557_RS05850;product=tRNA pseudouridine(65) synthase TruC;protein_id=WP_075671720.1;transl_table=11 NZ_JAIKUA010000071.1 RefSeq gene 10618 12063 . + . ID=gene-L2557_RS05855;Name=ptsG;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=L2557_RS05855 NZ_JAIKUA010000071.1 Protein Homology CDS 10618 12063 . + 0 ID=cds-WP_075671718.1;Parent=gene-L2557_RS05855;Dbxref=GenBank:WP_075671718.1;Name=WP_075671718.1;Ontology_term=GO:0009401,GO:1904659,GO:0008982,GO:0055056;gbkey=CDS;gene=ptsG;go_function=protein-N(PI)-phosphohistidine-sugar phosphotransferase activity|0008982||IEA,D-glucose transmembrane transporter activity|0055056||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,D-glucose transmembrane transport|1904659||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245486.1;locus_tag=L2557_RS05855;product=PTS glucose transporter subunit IIBC;protein_id=WP_075671718.1;transl_table=11 NZ_JAIKUA010000071.1 RefSeq gene 12193 12402 . + . ID=gene-L2557_RS05860;Name=L2557_RS05860;end_range=12402,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05860;partial=true NZ_JAIKUA010000071.1 GeneMarkS-2+ CDS 12193 12402 . + 0 ID=cds-WP_235409931.1;Parent=gene-L2557_RS05860;Dbxref=GenBank:WP_235409931.1;Name=WP_235409931.1;end_range=12402,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS05860;partial=true;product=hypothetical protein;protein_id=WP_235409931.1;transl_table=11 ##sequence-region NZ_JAIKUA010000072.1 1 9754 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000072.1 RefSeq region 1 9754 . + . ID=NZ_JAIKUA010000072.1:1..9754;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000072.1 RefSeq gene 120 728 . + . ID=gene-L2557_RS05865;Name=L2557_RS05865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05865 NZ_JAIKUA010000072.1 Protein Homology CDS 120 728 . + 0 ID=cds-WP_235409932.1;Parent=gene-L2557_RS05865;Dbxref=GenBank:WP_235409932.1;Name=WP_235409932.1;Ontology_term=GO:0006281,GO:0019104,GO:0032993;gbkey=CDS;go_component=protein-DNA complex|0032993||IEA;go_function=DNA N-glycosylase activity|0019104||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004876571.1;locus_tag=L2557_RS05865;product=DNA-3-methyladenine glycosylase family protein;protein_id=WP_235409932.1;transl_table=11 NZ_JAIKUA010000072.1 RefSeq gene 806 1654 . + . ID=gene-L2557_RS05870;Name=ada;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=L2557_RS05870 NZ_JAIKUA010000072.1 Protein Homology CDS 806 1654 . + 0 ID=cds-WP_075672865.1;Parent=gene-L2557_RS05870;Dbxref=GenBank:WP_075672865.1;Name=WP_075672865.1;Ontology_term=GO:0006281,GO:0006355,GO:0003700;gbkey=CDS;gene=ada;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=DNA repair|0006281||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910146.1;locus_tag=L2557_RS05870;product=bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada;protein_id=WP_075672865.1;transl_table=11 NZ_JAIKUA010000072.1 RefSeq gene 1716 2036 . + . ID=gene-L2557_RS05875;Name=yqfB;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=L2557_RS05875 NZ_JAIKUA010000072.1 Protein Homology CDS 1716 2036 . + 0 ID=cds-WP_099660415.1;Parent=gene-L2557_RS05875;Dbxref=GenBank:WP_099660415.1;Name=WP_099660415.1;gbkey=CDS;gene=yqfB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536811.1;locus_tag=L2557_RS05875;product=N(4)-acetylcytidine aminohydrolase;protein_id=WP_099660415.1;transl_table=11 NZ_JAIKUA010000072.1 RefSeq gene 2095 3840 . - . ID=gene-L2557_RS05880;Name=L2557_RS05880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05880 NZ_JAIKUA010000072.1 Protein Homology CDS 2095 3840 . - 0 ID=cds-WP_099660416.1;Parent=gene-L2557_RS05880;Dbxref=GenBank:WP_099660416.1;Name=WP_099660416.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014416697.1;locus_tag=L2557_RS05880;product=ABC-F family ATP-binding cassette domain-containing protein;protein_id=WP_099660416.1;transl_table=11 NZ_JAIKUA010000072.1 RefSeq gene 4571 5671 . + . ID=gene-L2557_RS05885;Name=ddlA;gbkey=Gene;gene=ddlA;gene_biotype=protein_coding;locus_tag=L2557_RS05885 NZ_JAIKUA010000072.1 Protein Homology CDS 4571 5671 . + 0 ID=cds-WP_099660417.1;Parent=gene-L2557_RS05885;Dbxref=GenBank:WP_099660417.1;Name=WP_099660417.1;Ontology_term=GO:0008716;gbkey=CDS;gene=ddlA;go_function=D-alanine-D-alanine ligase activity|0008716||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242920.1;locus_tag=L2557_RS05885;product=D-alanine--D-alanine ligase;protein_id=WP_099660417.1;transl_table=11 NZ_JAIKUA010000072.1 RefSeq gene 5697 6077 . + . ID=gene-L2557_RS05890;Name=L2557_RS05890;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05890 NZ_JAIKUA010000072.1 Protein Homology CDS 5697 6077 . + 0 ID=cds-WP_099660418.1;Parent=gene-L2557_RS05890;Dbxref=GenBank:WP_099660418.1;Name=WP_099660418.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017494090.1;locus_tag=L2557_RS05890;product=VOC family protein;protein_id=WP_099660418.1;transl_table=11 NZ_JAIKUA010000072.1 RefSeq gene 6132 7007 . - . ID=gene-L2557_RS05895;Name=L2557_RS05895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05895 NZ_JAIKUA010000072.1 Protein Homology CDS 6132 7007 . - 0 ID=cds-WP_235409933.1;Parent=gene-L2557_RS05895;Dbxref=GenBank:WP_235409933.1;Name=WP_235409933.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250436.1;locus_tag=L2557_RS05895;product=DMT family transporter;protein_id=WP_235409933.1;transl_table=11 NZ_JAIKUA010000072.1 RefSeq gene 7179 8513 . + . ID=gene-L2557_RS05900;Name=L2557_RS05900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05900 NZ_JAIKUA010000072.1 Protein Homology CDS 7179 8513 . + 0 ID=cds-WP_099660420.1;Parent=gene-L2557_RS05900;Dbxref=GenBank:WP_099660420.1;Name=WP_099660420.1;Ontology_term=GO:0030170;gbkey=CDS;go_function=pyridoxal phosphate binding|0030170||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007873218.1;locus_tag=L2557_RS05900;product=aminotransferase-like domain-containing protein;protein_id=WP_099660420.1;transl_table=11 NZ_JAIKUA010000072.1 RefSeq gene 8581 9669 . - . ID=gene-L2557_RS05905;Name=L2557_RS05905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05905 NZ_JAIKUA010000072.1 Protein Homology CDS 8581 9669 . - 0 ID=cds-WP_099660421.1;Parent=gene-L2557_RS05905;Dbxref=GenBank:WP_099660421.1;Name=WP_099660421.1;Ontology_term=GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004239285.1;locus_tag=L2557_RS05905;product=alpha/beta hydrolase family protein;protein_id=WP_099660421.1;transl_table=11 ##sequence-region NZ_JAIKUA010000073.1 1 22117 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000073.1 RefSeq region 1 22117 . + . ID=NZ_JAIKUA010000073.1:1..22117;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000073.1 RefSeq pseudogene 1 350 . - . ID=gene-L2557_RS05910;Name=L2557_RS05910;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS05910;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000073.1 GeneMarkS-2+ CDS 1 350 . - 0 ID=cds-L2557_RS05910;Parent=gene-L2557_RS05910;Note=incomplete%3B too short partial abutting assembly gap%3B missing C-terminus;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS05910;partial=true;product=type I secretion system permease/ATPase;pseudo=true;start_range=.,1;transl_table=11 NZ_JAIKUA010000073.1 RefSeq gene 461 1054 . - . ID=gene-L2557_RS05915;Name=L2557_RS05915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05915 NZ_JAIKUA010000073.1 Protein Homology CDS 461 1054 . - 0 ID=cds-WP_171455326.1;Parent=gene-L2557_RS05915;Dbxref=GenBank:WP_171455326.1;Name=WP_171455326.1;Ontology_term=GO:0006730,GO:0030272;gbkey=CDS;go_function=5-formyltetrahydrofolate cyclo-ligase activity|0030272||IEA;go_process=one-carbon metabolic process|0006730||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368219.1;locus_tag=L2557_RS05915;product=5-formyltetrahydrofolate cyclo-ligase;protein_id=WP_171455326.1;transl_table=11 NZ_JAIKUA010000073.1 RefSeq gene 1226 1409 . - . ID=gene-L2557_RS05920;Name=ssrS;gbkey=Gene;gene=ssrS;gene_biotype=ncRNA;locus_tag=L2557_RS05920 NZ_JAIKUA010000073.1 cmsearch ncRNA 1226 1409 . - . ID=rna-L2557_RS05920;Parent=gene-L2557_RS05920;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=L2557_RS05920;product=6S RNA NZ_JAIKUA010000073.1 cmsearch exon 1226 1409 . - . ID=exon-L2557_RS05920-1;Parent=rna-L2557_RS05920;Dbxref=RFAM:RF00013;gbkey=ncRNA;gene=ssrS;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=L2557_RS05920;product=6S RNA NZ_JAIKUA010000073.1 RefSeq gene 1519 1848 . - . ID=gene-L2557_RS05925;Name=zapA;gbkey=Gene;gene=zapA;gene_biotype=protein_coding;locus_tag=L2557_RS05925 NZ_JAIKUA010000073.1 Protein Homology CDS 1519 1848 . - 0 ID=cds-WP_023581530.1;Parent=gene-L2557_RS05925;Dbxref=GenBank:WP_023581530.1;Name=WP_023581530.1;gbkey=CDS;gene=zapA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244048.1;locus_tag=L2557_RS05925;product=cell division protein ZapA;protein_id=WP_023581530.1;transl_table=11 NZ_JAIKUA010000073.1 RefSeq gene 2025 2603 . + . ID=gene-L2557_RS05930;Name=L2557_RS05930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05930 NZ_JAIKUA010000073.1 Protein Homology CDS 2025 2603 . + 0 ID=cds-WP_075670850.1;Parent=gene-L2557_RS05930;Dbxref=GenBank:WP_075670850.1;Name=WP_075670850.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248530.1;locus_tag=L2557_RS05930;product=YecA/YgfB family protein;protein_id=WP_075670850.1;transl_table=11 NZ_JAIKUA010000073.1 RefSeq gene 2655 3965 . + . ID=gene-L2557_RS05935;Name=pepP;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=L2557_RS05935 NZ_JAIKUA010000073.1 Protein Homology CDS 2655 3965 . + 0 ID=cds-WP_075670852.1;Parent=gene-L2557_RS05935;Dbxref=GenBank:WP_075670852.1;Name=WP_075670852.1;Ontology_term=GO:0070006;gbkey=CDS;gene=pepP;go_function=metalloaminopeptidase activity|0070006||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244046.1;locus_tag=L2557_RS05935;product=Xaa-Pro aminopeptidase;protein_id=WP_075670852.1;transl_table=11 NZ_JAIKUA010000073.1 RefSeq gene 3979 5151 . + . ID=gene-L2557_RS05940;Name=ubiH;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;gene_synonym=visB;locus_tag=L2557_RS05940 NZ_JAIKUA010000073.1 Protein Homology CDS 3979 5151 . + 0 ID=cds-WP_235409934.1;Parent=gene-L2557_RS05940;Dbxref=GenBank:WP_235409934.1;Name=WP_235409934.1;Ontology_term=GO:0006744,GO:0008681,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiH;go_function=2-octaprenyl-6-methoxyphenol hydroxylase activity|0008681||IEA,oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244045.1;locus_tag=L2557_RS05940;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=WP_235409934.1;transl_table=11 NZ_JAIKUA010000073.1 RefSeq gene 5207 6442 . + . ID=gene-L2557_RS05945;Name=ubiI;gbkey=Gene;gene=ubiI;gene_biotype=protein_coding;gene_synonym=visC;locus_tag=L2557_RS05945 NZ_JAIKUA010000073.1 Protein Homology CDS 5207 6442 . + 0 ID=cds-WP_075670856.1;Parent=gene-L2557_RS05945;Dbxref=GenBank:WP_075670856.1;Name=WP_075670856.1;Ontology_term=GO:0006744,GO:0016709,GO:0071949;gbkey=CDS;gene=ubiI;go_function=oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C NAD(P)H as one donor%2C and incorporation of one atom of oxygen|0016709||IEA,FAD binding|0071949||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244044.1;locus_tag=L2557_RS05945;product=FAD-dependent 2-octaprenylphenol hydroxylase;protein_id=WP_075670856.1;transl_table=11 NZ_JAIKUA010000073.1 RefSeq gene 6856 7950 . + . ID=gene-L2557_RS05950;Name=gcvT;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=L2557_RS05950 NZ_JAIKUA010000073.1 Protein Homology CDS 6856 7950 . + 0 ID=cds-WP_075670858.1;Parent=gene-L2557_RS05950;Dbxref=GenBank:WP_075670858.1;Name=WP_075670858.1;Ontology_term=GO:0019464,GO:0004047,GO:0005737;gbkey=CDS;gene=gcvT;go_component=cytoplasm|0005737||IEA;go_function=aminomethyltransferase activity|0004047||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368218.1;locus_tag=L2557_RS05950;product=glycine cleavage system aminomethyltransferase GcvT;protein_id=WP_075670858.1;transl_table=11 NZ_JAIKUA010000073.1 RefSeq gene 7985 8377 . + . ID=gene-L2557_RS05955;Name=gcvH;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=L2557_RS05955 NZ_JAIKUA010000073.1 Protein Homology CDS 7985 8377 . + 0 ID=cds-WP_006533681.1;Parent=gene-L2557_RS05955;Dbxref=GenBank:WP_006533681.1;Name=WP_006533681.1;Ontology_term=GO:0019464,GO:0005960;gbkey=CDS;gene=gcvH;go_component=glycine cleavage complex|0005960||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244042.1;locus_tag=L2557_RS05955;product=glycine cleavage system protein GcvH;protein_id=WP_006533681.1;transl_table=11 NZ_JAIKUA010000073.1 RefSeq gene 8511 11387 . + . ID=gene-L2557_RS05960;Name=gcvP;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=L2557_RS05960 NZ_JAIKUA010000073.1 Protein Homology CDS 8511 11387 . + 0 ID=cds-WP_099659327.1;Parent=gene-L2557_RS05960;Dbxref=GenBank:WP_099659327.1;Name=WP_099659327.1;Ontology_term=GO:0019464,GO:0004375;gbkey=CDS;gene=gcvP;go_function=glycine dehydrogenase (decarboxylating) activity|0004375||IEA;go_process=glycine decarboxylation via glycine cleavage system|0019464||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827174.1;locus_tag=L2557_RS05960;product=aminomethyl-transferring glycine dehydrogenase;protein_id=WP_099659327.1;transl_table=11 NZ_JAIKUA010000073.1 RefSeq gene 11478 12080 . - . ID=gene-L2557_RS05965;Name=L2557_RS05965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05965 NZ_JAIKUA010000073.1 Protein Homology CDS 11478 12080 . - 0 ID=cds-WP_075670862.1;Parent=gene-L2557_RS05965;Dbxref=GenBank:WP_075670862.1;Name=WP_075670862.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533678.1;locus_tag=L2557_RS05965;product=HD domain-containing protein;protein_id=WP_075670862.1;transl_table=11 NZ_JAIKUA010000073.1 RefSeq gene 12111 13097 . - . ID=gene-L2557_RS05970;Name=ygfZ;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=L2557_RS05970 NZ_JAIKUA010000073.1 Protein Homology CDS 12111 13097 . - 0 ID=cds-WP_099659328.1;Parent=gene-L2557_RS05970;Dbxref=GenBank:WP_099659328.1;Name=WP_099659328.1;Ontology_term=GO:0009451,GO:0005542;gbkey=CDS;gene=ygfZ;go_function=folic acid binding|0005542||IEA;go_process=RNA modification|0009451||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248524.1;locus_tag=L2557_RS05970;product=tRNA-modifying protein YgfZ;protein_id=WP_099659328.1;transl_table=11 NZ_JAIKUA010000073.1 RefSeq gene 13362 13637 . + . ID=gene-L2557_RS05975;Name=sdhE;gbkey=Gene;gene=sdhE;gene_biotype=protein_coding;locus_tag=L2557_RS05975 NZ_JAIKUA010000073.1 Protein Homology CDS 13362 13637 . + 0 ID=cds-WP_075670946.1;Parent=gene-L2557_RS05975;Dbxref=GenBank:WP_075670946.1;Name=WP_075670946.1;gbkey=CDS;gene=sdhE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244038.1;locus_tag=L2557_RS05975;product=FAD assembly factor SdhE;protein_id=WP_075670946.1;transl_table=11 NZ_JAIKUA010000073.1 RefSeq gene 14118 14525 . + . ID=gene-L2557_RS05980;Name=L2557_RS05980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS05980 NZ_JAIKUA010000073.1 Protein Homology CDS 14118 14525 . + 0 ID=cds-WP_098942225.1;Parent=gene-L2557_RS05980;Dbxref=GenBank:WP_098942225.1;Name=WP_098942225.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244035.1;locus_tag=L2557_RS05980;product=protein YgfX;protein_id=WP_098942225.1;transl_table=11 NZ_JAIKUA010000073.1 RefSeq gene 14542 15060 . - . ID=gene-L2557_RS05985;Name=fldB;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=L2557_RS05985 NZ_JAIKUA010000073.1 Protein Homology CDS 14542 15060 . - 0 ID=cds-WP_075670948.1;Parent=gene-L2557_RS05985;Dbxref=GenBank:WP_075670948.1;Name=WP_075670948.1;Ontology_term=GO:0009055,GO:0010181;gbkey=CDS;gene=fldB;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244033.1;locus_tag=L2557_RS05985;product=flavodoxin FldB;protein_id=WP_075670948.1;transl_table=11 NZ_JAIKUA010000073.1 RefSeq gene 15169 16107 . + . ID=gene-L2557_RS05990;Name=xerD;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=L2557_RS05990 NZ_JAIKUA010000073.1 Protein Homology CDS 15169 16107 . + 0 ID=cds-WP_075670868.1;Parent=gene-L2557_RS05990;Dbxref=GenBank:WP_075670868.1;Name=WP_075670868.1;Ontology_term=GO:0006310,GO:0009009;gbkey=CDS;gene=xerD;go_function=site-specific recombinase activity|0009009||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248523.1;locus_tag=L2557_RS05990;product=site-specific tyrosine recombinase XerD;protein_id=WP_075670868.1;transl_table=11 NZ_JAIKUA010000073.1 RefSeq gene 16141 16848 . + . ID=gene-L2557_RS05995;Name=dsbC;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=L2557_RS05995 NZ_JAIKUA010000073.1 Protein Homology CDS 16141 16848 . + 0 ID=cds-WP_075670870.1;Parent=gene-L2557_RS05995;Dbxref=GenBank:WP_075670870.1;Name=WP_075670870.1;Ontology_term=GO:0042597;gbkey=CDS;gene=dsbC;go_component=periplasmic space|0042597||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244030.1;locus_tag=L2557_RS05995;product=bifunctional protein-disulfide isomerase/oxidoreductase DsbC;protein_id=WP_075670870.1;transl_table=11 NZ_JAIKUA010000073.1 RefSeq gene 16858 18591 . + . ID=gene-L2557_RS06000;Name=recJ;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=L2557_RS06000 NZ_JAIKUA010000073.1 Protein Homology CDS 16858 18591 . + 0 ID=cds-WP_075670872.1;Parent=gene-L2557_RS06000;Dbxref=GenBank:WP_075670872.1;Name=WP_075670872.1;Ontology_term=GO:0006281,GO:0006310,GO:0008409;gbkey=CDS;gene=recJ;go_function=5'-3' exonuclease activity|0008409||IEA;go_process=DNA repair|0006281||IEA,DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533669.1;locus_tag=L2557_RS06000;product=single-stranded-DNA-specific exonuclease RecJ;protein_id=WP_075670872.1;transl_table=11 NZ_JAIKUA010000073.1 RefSeq gene 18763 19861 . + . ID=gene-L2557_RS06005;Name=prfB;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=L2557_RS06005 NZ_JAIKUA010000073.1 Protein Homology CDS 18763 18837 . + 0 ID=cds-WP_099659329.1;Parent=gene-L2557_RS06005;Dbxref=GenBank:WP_099659329.1;Name=WP_099659329.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=L2557_RS06005;product=peptide chain release factor 2;protein_id=WP_099659329.1;transl_table=11 NZ_JAIKUA010000073.1 Protein Homology CDS 18839 19861 . + 0 ID=cds-WP_099659329.1;Parent=gene-L2557_RS06005;Dbxref=GenBank:WP_099659329.1;Name=WP_099659329.1;Note=programmed frameshift;Ontology_term=GO:0006415,GO:0016149,GO:0005737;exception=ribosomal slippage;gbkey=CDS;gene=prfB;go_component=cytoplasm|0005737||IEA;go_function=translation release factor activity%2C codon specific|0016149||IEA;go_process=translational termination|0006415||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_311790.1;locus_tag=L2557_RS06005;product=peptide chain release factor 2;protein_id=WP_099659329.1;transl_table=11 NZ_JAIKUA010000073.1 RefSeq gene 19870 21384 . + . ID=gene-L2557_RS06010;Name=lysS;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=L2557_RS06010 NZ_JAIKUA010000073.1 Protein Homology CDS 19870 21384 . + 0 ID=cds-WP_099659330.1;Parent=gene-L2557_RS06010;Dbxref=GenBank:WP_099659330.1;Name=WP_099659330.1;Ontology_term=GO:0006430,GO:0004824,GO:0005524,GO:0005737;gbkey=CDS;gene=lysS;go_component=cytoplasm|0005737||IEA;go_function=lysine-tRNA ligase activity|0004824||IEA,ATP binding|0005524||IEA;go_process=lysyl-tRNA aminoacylation|0006430||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011147728.1;locus_tag=L2557_RS06010;product=lysine--tRNA ligase;protein_id=WP_099659330.1;transl_table=11 NZ_JAIKUA010000073.1 RefSeq gene 21576 21649 . + . ID=gene-L2557_RS06015;Name=L2557_RS06015;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS06015 NZ_JAIKUA010000073.1 tRNAscan-SE tRNA 21576 21649 . + . ID=rna-L2557_RS06015;Parent=gene-L2557_RS06015;anticodon=(pos:21608..21610);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS06015;product=tRNA-Gly NZ_JAIKUA010000073.1 tRNAscan-SE exon 21576 21649 . + . ID=exon-L2557_RS06015-1;Parent=rna-L2557_RS06015;anticodon=(pos:21608..21610);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS06015;product=tRNA-Gly ##sequence-region NZ_JAIKUA010000074.1 1 15141 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000074.1 RefSeq region 1 15141 . + . ID=NZ_JAIKUA010000074.1:1..15141;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000074.1 RefSeq gene 430 506 . - . ID=gene-L2557_RS06020;Name=L2557_RS06020;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS06020 NZ_JAIKUA010000074.1 tRNAscan-SE tRNA 430 506 . - . ID=rna-L2557_RS06020;Parent=gene-L2557_RS06020;anticodon=(pos:complement(470..472));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS06020;product=tRNA-Ile NZ_JAIKUA010000074.1 tRNAscan-SE exon 430 506 . - . ID=exon-L2557_RS06020-1;Parent=rna-L2557_RS06020;anticodon=(pos:complement(470..472));gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS06020;product=tRNA-Ile NZ_JAIKUA010000074.1 RefSeq gene 824 2680 . - . ID=gene-L2557_RS06025;Name=rpoD;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=L2557_RS06025 NZ_JAIKUA010000074.1 Protein Homology CDS 824 2680 . - 0 ID=cds-WP_075672892.1;Parent=gene-L2557_RS06025;Dbxref=GenBank:WP_075672892.1;Name=WP_075672892.1;Ontology_term=GO:0006355,GO:0003700,GO:0016987;gbkey=CDS;gene=rpoD;go_function=DNA-binding transcription factor activity|0003700||IEA,sigma factor activity|0016987||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228906.1;locus_tag=L2557_RS06025;product=RNA polymerase sigma factor RpoD;protein_id=WP_075672892.1;transl_table=11 NZ_JAIKUA010000074.1 RefSeq gene 2867 4615 . - . ID=gene-L2557_RS06030;Name=dnaG;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=L2557_RS06030 NZ_JAIKUA010000074.1 Protein Homology CDS 2867 4615 . - 0 ID=cds-WP_075672893.1;Parent=gene-L2557_RS06030;Dbxref=GenBank:WP_075672893.1;Name=WP_075672893.1;Ontology_term=GO:0006269,GO:0003899;gbkey=CDS;gene=dnaG;go_function=DNA-directed RNA polymerase activity|0003899||IEA;go_process=DNA replication%2C synthesis of primer|0006269||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249459.1;locus_tag=L2557_RS06030;product=DNA primase;protein_id=WP_075672893.1;transl_table=11 NZ_JAIKUA010000074.1 RefSeq gene 4728 4943 . - . ID=gene-L2557_RS06035;Name=rpsU;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=L2557_RS06035 NZ_JAIKUA010000074.1 Protein Homology CDS 4728 4943 . - 0 ID=cds-WP_001144069.1;Parent=gene-L2557_RS06035;Dbxref=GenBank:WP_001144069.1;Name=WP_001144069.1;Ontology_term=GO:0006412,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsU;go_component=ribosome|0005840||IEA;go_function=structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009874014.1;locus_tag=L2557_RS06035;product=30S ribosomal protein S21;protein_id=WP_001144069.1;transl_table=11 NZ_JAIKUA010000074.1 RefSeq gene 5286 6308 . + . ID=gene-L2557_RS06040;Name=tsaD;gbkey=Gene;gene=tsaD;gene_biotype=protein_coding;locus_tag=L2557_RS06040 NZ_JAIKUA010000074.1 Protein Homology CDS 5286 6308 . + 0 ID=cds-WP_098941951.1;Parent=gene-L2557_RS06040;Dbxref=GenBank:WP_098941951.1;Name=WP_098941951.1;Ontology_term=GO:0002949;gbkey=CDS;gene=tsaD;go_process=tRNA threonylcarbamoyladenosine modification|0002949||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245584.1;locus_tag=L2557_RS06040;product=tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD;protein_id=WP_098941951.1;transl_table=11 NZ_JAIKUA010000074.1 RefSeq gene 6415 7071 . - . ID=gene-L2557_RS06045;Name=plsY;gbkey=Gene;gene=plsY;gene_biotype=protein_coding;locus_tag=L2557_RS06045 NZ_JAIKUA010000074.1 Protein Homology CDS 6415 7071 . - 0 ID=cds-WP_075672895.1;Parent=gene-L2557_RS06045;Dbxref=GenBank:WP_075672895.1;Name=WP_075672895.1;Ontology_term=GO:0006654,GO:0008374,GO:0005886;gbkey=CDS;gene=plsY;go_component=plasma membrane|0005886||IEA;go_function=O-acyltransferase activity|0008374||IEA;go_process=phosphatidic acid biosynthetic process|0006654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245577.1;locus_tag=L2557_RS06045;product=glycerol-3-phosphate 1-O-acyltransferase PlsY;protein_id=WP_075672895.1;transl_table=11 NZ_JAIKUA010000074.1 RefSeq gene 7176 7526 . + . ID=gene-L2557_RS06050;Name=folB;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=L2557_RS06050 NZ_JAIKUA010000074.1 Protein Homology CDS 7176 7526 . + 0 ID=cds-WP_075672896.1;Parent=gene-L2557_RS06050;Dbxref=GenBank:WP_075672896.1;Name=WP_075672896.1;Ontology_term=GO:0006760,GO:0004150;gbkey=CDS;gene=folB;go_function=dihydroneopterin aldolase activity|0004150||IEA;go_process=folic acid-containing compound metabolic process|0006760||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245575.1;locus_tag=L2557_RS06050;product=bifunctional dihydroneopterin aldolase/7%2C8-dihydroneopterin epimerase;protein_id=WP_075672896.1;transl_table=11 NZ_JAIKUA010000074.1 RefSeq gene 7527 8765 . - . ID=gene-L2557_RS06055;Name=L2557_RS06055;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06055 NZ_JAIKUA010000074.1 Protein Homology CDS 7527 8765 . - 0 ID=cds-WP_099660219.1;Parent=gene-L2557_RS06055;Dbxref=GenBank:WP_099660219.1;Name=WP_099660219.1;Ontology_term=GO:0001680,GO:0003723,GO:0004810,GO:0005524;gbkey=CDS;go_function=RNA binding|0003723||IEA,CCA tRNA nucleotidyltransferase activity|0004810||IEA,ATP binding|0005524||IEA;go_process=tRNA 3'-terminal CCA addition|0001680||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006328189.1;locus_tag=L2557_RS06055;product=multifunctional CCA addition/repair protein;protein_id=WP_099660219.1;transl_table=11 NZ_JAIKUA010000074.1 RefSeq gene 8792 9412 . - . ID=gene-L2557_RS06060;Name=L2557_RS06060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06060 NZ_JAIKUA010000074.1 Protein Homology CDS 8792 9412 . - 0 ID=cds-WP_075672898.1;Parent=gene-L2557_RS06060;Dbxref=GenBank:WP_075672898.1;Name=WP_075672898.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368329.1;locus_tag=L2557_RS06060;product=TIGR04211 family SH3 domain-containing protein;protein_id=WP_075672898.1;transl_table=11 NZ_JAIKUA010000074.1 RefSeq gene 9632 10555 . + . ID=gene-L2557_RS06065;Name=L2557_RS06065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06065 NZ_JAIKUA010000074.1 Protein Homology CDS 9632 10555 . + 0 ID=cds-WP_109419687.1;Parent=gene-L2557_RS06065;Dbxref=GenBank:WP_109419687.1;Name=WP_109419687.1;Ontology_term=GO:0046872,GO:0050355;gbkey=CDS;go_function=metal ion binding|0046872||IEA,inorganic triphosphate phosphatase activity|0050355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245571.1;locus_tag=L2557_RS06065;product=CYTH domain-containing protein;protein_id=WP_109419687.1;transl_table=11 NZ_JAIKUA010000074.1 RefSeq gene 10582 13422 . + . ID=gene-L2557_RS06070;Name=glnE;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=L2557_RS06070 NZ_JAIKUA010000074.1 Protein Homology CDS 10582 13422 . + 0 ID=cds-WP_099660217.1;Parent=gene-L2557_RS06070;Dbxref=GenBank:WP_099660217.1;Name=WP_099660217.1;Ontology_term=GO:0008882;gbkey=CDS;gene=glnE;go_function=[glutamate-ammonia-ligase] adenylyltransferase activity|0008882||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015960443.1;locus_tag=L2557_RS06070;product=bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase;protein_id=WP_099660217.1;transl_table=11 NZ_JAIKUA010000074.1 RefSeq gene 13518 14942 . + . ID=gene-L2557_RS06075;Name=hldE;gbkey=Gene;gene=hldE;gene_biotype=protein_coding;locus_tag=L2557_RS06075 NZ_JAIKUA010000074.1 Protein Homology CDS 13518 14942 . + 0 ID=cds-WP_099660216.1;Parent=gene-L2557_RS06075;Dbxref=GenBank:WP_099660216.1;Name=WP_099660216.1;Ontology_term=GO:0005975,GO:0009058,GO:0016779;gbkey=CDS;gene=hldE;go_function=nucleotidyltransferase activity|0016779||IEA;go_process=carbohydrate metabolic process|0005975||IEA,biosynthetic process|0009058||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249466.1;locus_tag=L2557_RS06075;product=bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE;protein_id=WP_099660216.1;transl_table=11 NZ_JAIKUA010000074.1 RefSeq pseudogene 15038 15141 . - . ID=gene-L2557_RS06080;Name=L2557_RS06080;end_range=15141,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS06080;partial=true;pseudo=true NZ_JAIKUA010000074.1 Protein Homology CDS 15038 15141 . - 2 ID=cds-L2557_RS06080;Parent=gene-L2557_RS06080;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus;end_range=15141,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006325064.1;locus_tag=L2557_RS06080;partial=true;product=GntR family transcriptional regulator;pseudo=true;transl_table=11 ##sequence-region NZ_JAIKUA010000075.1 1 1546 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000075.1 RefSeq region 1 1546 . + . ID=NZ_JAIKUA010000075.1:1..1546;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000075.1 RefSeq gene 209 466 . - . ID=gene-L2557_RS06085;Name=L2557_RS06085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06085 NZ_JAIKUA010000075.1 Protein Homology CDS 209 466 . - 0 ID=cds-WP_098943413.1;Parent=gene-L2557_RS06085;Dbxref=GenBank:WP_098943413.1;Name=WP_098943413.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910514.1;locus_tag=L2557_RS06085;product=MafI family immunity protein;protein_id=WP_098943413.1;transl_table=11 NZ_JAIKUA010000075.1 RefSeq gene 480 1139 . - . ID=gene-L2557_RS17940;Name=L2557_RS17940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17940 NZ_JAIKUA010000075.1 Protein Homology CDS 480 1139 . - 0 ID=cds-WP_164530446.1;Parent=gene-L2557_RS17940;Dbxref=GenBank:WP_164530446.1;Name=WP_164530446.1;Ontology_term=GO:0004519;gbkey=CDS;go_function=endonuclease activity|0004519||IEA;inference=COORDINATES: protein motif:HMM:NF025792.6;locus_tag=L2557_RS17940;product=EndoU domain-containing protein;protein_id=WP_164530446.1;transl_table=11 NZ_JAIKUA010000075.1 RefSeq gene 1242 1546 . - . ID=gene-L2557_RS06095;Name=L2557_RS06095;end_range=1546,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06095;partial=true NZ_JAIKUA010000075.1 Protein Homology CDS 1242 1546 . - 2 ID=cds-WP_412761647.1;Parent=gene-L2557_RS06095;Dbxref=GenBank:WP_412761647.1;Name=WP_412761647.1;end_range=1546,.;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF044555.3;locus_tag=L2557_RS06095;partial=true;product=DUF6862 domain-containing protein;protein_id=WP_412761647.1;transl_table=11 ##sequence-region NZ_JAIKUA010000076.1 1 11078 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000076.1 RefSeq region 1 11078 . + . ID=NZ_JAIKUA010000076.1:1..11078;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000076.1 RefSeq gene 258 1391 . + . ID=gene-L2557_RS06100;Name=L2557_RS06100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06100 NZ_JAIKUA010000076.1 Protein Homology CDS 258 1391 . + 0 ID=cds-WP_075674271.1;Parent=gene-L2557_RS06100;Dbxref=GenBank:WP_075674271.1;Name=WP_075674271.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249978.1;locus_tag=L2557_RS06100;product=M20 family metallopeptidase;protein_id=WP_075674271.1;transl_table=11 NZ_JAIKUA010000076.1 RefSeq gene 1401 2807 . + . ID=gene-L2557_RS06105;Name=L2557_RS06105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06105 NZ_JAIKUA010000076.1 Protein Homology CDS 1401 2807 . + 0 ID=cds-WP_075674272.1;Parent=gene-L2557_RS06105;Dbxref=GenBank:WP_075674272.1;Name=WP_075674272.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246570.1;locus_tag=L2557_RS06105;product=YfcC family protein;protein_id=WP_075674272.1;transl_table=11 NZ_JAIKUA010000076.1 RefSeq gene 2864 3496 . - . ID=gene-L2557_RS06110;Name=L2557_RS06110;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06110 NZ_JAIKUA010000076.1 Protein Homology CDS 2864 3496 . - 0 ID=cds-WP_075674273.1;Parent=gene-L2557_RS06110;Dbxref=GenBank:WP_075674273.1;Name=WP_075674273.1;Ontology_term=GO:0045892;gbkey=CDS;go_process=negative regulation of DNA-templated transcription|0045892||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246569.1;locus_tag=L2557_RS06110;product=TetR/AcrR family transcriptional regulator C-terminal domain-containing protein;protein_id=WP_075674273.1;transl_table=11 NZ_JAIKUA010000076.1 RefSeq gene 3615 4715 . + . ID=gene-L2557_RS06115;Name=L2557_RS06115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06115 NZ_JAIKUA010000076.1 Protein Homology CDS 3615 4715 . + 0 ID=cds-WP_235409935.1;Parent=gene-L2557_RS06115;Dbxref=GenBank:WP_235409935.1;Name=WP_235409935.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249803.1;locus_tag=L2557_RS06115;product=HlyD family secretion protein;protein_id=WP_235409935.1;transl_table=11 NZ_JAIKUA010000076.1 RefSeq gene 4702 6237 . + . ID=gene-L2557_RS06120;Name=L2557_RS06120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06120 NZ_JAIKUA010000076.1 Protein Homology CDS 4702 6237 . + 0 ID=cds-WP_235409936.1;Parent=gene-L2557_RS06120;Dbxref=GenBank:WP_235409936.1;Name=WP_235409936.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926203.1;locus_tag=L2557_RS06120;product=MFS transporter;protein_id=WP_235409936.1;transl_table=11 NZ_JAIKUA010000076.1 RefSeq gene 6355 6804 . - . ID=gene-L2557_RS06125;Name=L2557_RS06125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06125 NZ_JAIKUA010000076.1 Protein Homology CDS 6355 6804 . - 0 ID=cds-WP_099659555.1;Parent=gene-L2557_RS06125;Dbxref=GenBank:WP_099659555.1;Name=WP_099659555.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249975.1;locus_tag=L2557_RS06125;product=DUF411 domain-containing protein;protein_id=WP_099659555.1;transl_table=11 NZ_JAIKUA010000076.1 RefSeq gene 7302 7712 . - . ID=gene-L2557_RS06130;Name=L2557_RS06130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06130 NZ_JAIKUA010000076.1 Protein Homology CDS 7302 7712 . - 0 ID=cds-WP_075674277.1;Parent=gene-L2557_RS06130;Dbxref=GenBank:WP_075674277.1;Name=WP_075674277.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019083666.1;locus_tag=L2557_RS06130;product=YgiW/YdeI family stress tolerance OB fold protein;protein_id=WP_075674277.1;transl_table=11 NZ_JAIKUA010000076.1 RefSeq gene 8059 8622 . + . ID=gene-L2557_RS06135;Name=satP;gbkey=Gene;gene=satP;gene_biotype=protein_coding;locus_tag=L2557_RS06135 NZ_JAIKUA010000076.1 Protein Homology CDS 8059 8622 . + 0 ID=cds-WP_109410100.1;Parent=gene-L2557_RS06135;Dbxref=GenBank:WP_109410100.1;Name=WP_109410100.1;Ontology_term=GO:0016020;gbkey=CDS;gene=satP;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926750.1;locus_tag=L2557_RS06135;product=acetate uptake transporter;protein_id=WP_109410100.1;transl_table=11 NZ_JAIKUA010000076.1 RefSeq gene 8642 9226 . - . ID=gene-L2557_RS06140;Name=L2557_RS06140;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06140 NZ_JAIKUA010000076.1 Protein Homology CDS 8642 9226 . - 0 ID=cds-WP_075674278.1;Parent=gene-L2557_RS06140;Dbxref=GenBank:WP_075674278.1;Name=WP_075674278.1;Ontology_term=GO:0006508,GO:0004252,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=serine-type endopeptidase activity|0004252||IEA,zinc ion binding|0008270||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628739.1;locus_tag=L2557_RS06140;product=rhomboid family intramembrane serine protease;protein_id=WP_075674278.1;transl_table=11 NZ_JAIKUA010000076.1 RefSeq gene 9325 10236 . - . ID=gene-L2557_RS06145;Name=nagK;gbkey=Gene;gene=nagK;gene_biotype=protein_coding;locus_tag=L2557_RS06145 NZ_JAIKUA010000076.1 Protein Homology CDS 9325 10236 . - 0 ID=cds-WP_099659554.1;Parent=gene-L2557_RS06145;Dbxref=GenBank:WP_099659554.1;Name=WP_099659554.1;Ontology_term=GO:0045127;gbkey=CDS;gene=nagK;go_function=N-acetylglucosamine kinase activity|0045127||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368619.1;locus_tag=L2557_RS06145;product=N-acetylglucosamine kinase;protein_id=WP_099659554.1;transl_table=11 NZ_JAIKUA010000076.1 RefSeq gene 10393 10944 . - . ID=gene-L2557_RS06150;Name=L2557_RS06150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06150 NZ_JAIKUA010000076.1 Protein Homology CDS 10393 10944 . - 0 ID=cds-WP_156734367.1;Parent=gene-L2557_RS06150;Dbxref=GenBank:WP_156734367.1;Name=WP_156734367.1;Ontology_term=GO:0016799;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing N-glycosyl compounds|0016799||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534319.1;locus_tag=L2557_RS06150;product=NADAR family protein;protein_id=WP_156734367.1;transl_table=11 ##sequence-region NZ_JAIKUA010000077.1 1 19490 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000077.1 RefSeq region 1 19490 . + . ID=NZ_JAIKUA010000077.1:1..19490;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000077.1 RefSeq gene 77 607 . - . ID=gene-L2557_RS06155;Name=hemG;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=L2557_RS06155 NZ_JAIKUA010000077.1 Protein Homology CDS 77 607 . - 0 ID=cds-WP_235409937.1;Parent=gene-L2557_RS06155;Dbxref=GenBank:WP_235409937.1;Name=WP_235409937.1;gbkey=CDS;gene=hemG;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368796.1;locus_tag=L2557_RS06155;product=menaquinone-dependent protoporphyrinogen IX dehydrogenase;protein_id=WP_235409937.1;transl_table=11 NZ_JAIKUA010000077.1 RefSeq gene 628 2079 . - . ID=gene-L2557_RS06160;Name=trkH;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=L2557_RS06160 NZ_JAIKUA010000077.1 Protein Homology CDS 628 2079 . - 0 ID=cds-WP_036914641.1;Parent=gene-L2557_RS06160;Dbxref=GenBank:WP_036914641.1;Name=WP_036914641.1;gbkey=CDS;gene=trkH;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312804.1;locus_tag=L2557_RS06160;product=Trk system potassium transporter TrkH;protein_id=WP_036914641.1;transl_table=11 NZ_JAIKUA010000077.1 RefSeq gene 2105 2725 . - . ID=gene-L2557_RS06165;Name=L2557_RS06165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06165 NZ_JAIKUA010000077.1 Protein Homology CDS 2105 2725 . - 0 ID=cds-WP_075672313.1;Parent=gene-L2557_RS06165;Dbxref=GenBank:WP_075672313.1;Name=WP_075672313.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246103.1;locus_tag=L2557_RS06165;product=IMPACT family protein;protein_id=WP_075672313.1;transl_table=11 NZ_JAIKUA010000077.1 RefSeq gene 2725 4059 . - . ID=gene-L2557_RS06170;Name=pepQ;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=L2557_RS06170 NZ_JAIKUA010000077.1 Protein Homology CDS 2725 4059 . - 0 ID=cds-WP_075672311.1;Parent=gene-L2557_RS06170;Dbxref=GenBank:WP_075672311.1;Name=WP_075672311.1;gbkey=CDS;gene=pepQ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535535.1;locus_tag=L2557_RS06170;product=Xaa-Pro dipeptidase;protein_id=WP_075672311.1;transl_table=11 NZ_JAIKUA010000077.1 RefSeq gene 4328 6508 . + . ID=gene-L2557_RS06175;Name=fadB;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=L2557_RS06175 NZ_JAIKUA010000077.1 Protein Homology CDS 4328 6508 . + 0 ID=cds-WP_235409938.1;Parent=gene-L2557_RS06175;Dbxref=GenBank:WP_235409938.1;Name=WP_235409938.1;Ontology_term=GO:0006631,GO:0016491,GO:0070403;gbkey=CDS;gene=fadB;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005274741.1;locus_tag=L2557_RS06175;product=fatty acid oxidation complex subunit alpha FadB;protein_id=WP_235409938.1;transl_table=11 NZ_JAIKUA010000077.1 RefSeq gene 6520 7683 . + . ID=gene-L2557_RS06180;Name=fadA;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=L2557_RS06180 NZ_JAIKUA010000077.1 Protein Homology CDS 6520 7683 . + 0 ID=cds-WP_075672307.1;Parent=gene-L2557_RS06180;Dbxref=GenBank:WP_075672307.1;Name=WP_075672307.1;Ontology_term=GO:0006631,GO:0003988;gbkey=CDS;gene=fadA;go_function=acetyl-CoA C-acyltransferase activity|0003988||IEA;go_process=fatty acid metabolic process|0006631||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002211545.1;locus_tag=L2557_RS06180;product=acetyl-CoA C-acyltransferase FadA;protein_id=WP_075672307.1;transl_table=11 NZ_JAIKUA010000077.1 RefSeq gene 7834 8535 . - . ID=gene-L2557_RS06185;Name=fre;gbkey=Gene;gene=fre;gene_biotype=protein_coding;locus_tag=L2557_RS06185 NZ_JAIKUA010000077.1 Protein Homology CDS 7834 8535 . - 0 ID=cds-WP_075672305.1;Parent=gene-L2557_RS06185;Dbxref=GenBank:WP_075672305.1;Name=WP_075672305.1;Ontology_term=GO:0016491;gbkey=CDS;gene=fre;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246107.1;locus_tag=L2557_RS06185;product=NAD(P)H-flavin reductase;protein_id=WP_075672305.1;transl_table=11 NZ_JAIKUA010000077.1 RefSeq gene 8551 10020 . - . ID=gene-L2557_RS06190;Name=ubiD;gbkey=Gene;gene=ubiD;gene_biotype=protein_coding;locus_tag=L2557_RS06190 NZ_JAIKUA010000077.1 Protein Homology CDS 8551 10020 . - 0 ID=cds-WP_075672303.1;Parent=gene-L2557_RS06190;Dbxref=GenBank:WP_075672303.1;Name=WP_075672303.1;Ontology_term=GO:0016831;gbkey=CDS;gene=ubiD;go_function=carboxy-lyase activity|0016831||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368791.1;locus_tag=L2557_RS06190;product=4-hydroxy-3-polyprenylbenzoate decarboxylase;protein_id=WP_075672303.1;transl_table=11 NZ_JAIKUA010000077.1 RefSeq gene 10141 10866 . - . ID=gene-L2557_RS06195;Name=pepE;gbkey=Gene;gene=pepE;gene_biotype=protein_coding;locus_tag=L2557_RS06195 NZ_JAIKUA010000077.1 Protein Homology CDS 10141 10866 . - 0 ID=cds-WP_023583493.1;Parent=gene-L2557_RS06195;Dbxref=GenBank:WP_023583493.1;Name=WP_023583493.1;Ontology_term=GO:0006508,GO:0008236;gbkey=CDS;gene=pepE;go_function=serine-type peptidase activity|0008236||IEA;go_process=proteolysis|0006508||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535545.1;locus_tag=L2557_RS06195;product=dipeptidase PepE;protein_id=WP_023583493.1;transl_table=11 NZ_JAIKUA010000077.1 RefSeq gene 11155 11655 . + . ID=gene-L2557_RS06200;Name=rfaH;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=L2557_RS06200 NZ_JAIKUA010000077.1 Protein Homology CDS 11155 11655 . + 0 ID=cds-WP_099660253.1;Parent=gene-L2557_RS06200;Dbxref=GenBank:WP_099660253.1;Name=WP_099660253.1;Ontology_term=GO:0006355;gbkey=CDS;gene=rfaH;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246114.1;locus_tag=L2557_RS06200;product=transcription/translation regulatory transformer protein RfaH;protein_id=WP_099660253.1;transl_table=11 NZ_JAIKUA010000077.1 RefSeq gene 11718 12500 . - . ID=gene-L2557_RS06205;Name=tatC;gbkey=Gene;gene=tatC;gene_biotype=protein_coding;locus_tag=L2557_RS06205 NZ_JAIKUA010000077.1 Protein Homology CDS 11718 12500 . - 0 ID=cds-WP_075672299.1;Parent=gene-L2557_RS06205;Dbxref=GenBank:WP_075672299.1;Name=WP_075672299.1;gbkey=CDS;gene=tatC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249525.1;locus_tag=L2557_RS06205;product=Sec-independent protein translocase subunit TatC;protein_id=WP_075672299.1;transl_table=11 NZ_JAIKUA010000077.1 RefSeq gene 12504 13019 . - . ID=gene-L2557_RS06210;Name=tatB;gbkey=Gene;gene=tatB;gene_biotype=protein_coding;locus_tag=L2557_RS06210 NZ_JAIKUA010000077.1 Protein Homology CDS 12504 13019 . - 0 ID=cds-WP_075672297.1;Parent=gene-L2557_RS06210;Dbxref=GenBank:WP_075672297.1;Name=WP_075672297.1;Ontology_term=GO:0015628,GO:0008320,GO:0016020;gbkey=CDS;gene=tatB;go_component=membrane|0016020||IEA;go_function=protein transmembrane transporter activity|0008320||IEA;go_process=protein secretion by the type II secretion system|0015628||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249526.1;locus_tag=L2557_RS06210;product=Sec-independent protein translocase protein TatB;protein_id=WP_075672297.1;transl_table=11 NZ_JAIKUA010000077.1 RefSeq gene 13023 13292 . - . ID=gene-L2557_RS06215;Name=tatA;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=L2557_RS06215 NZ_JAIKUA010000077.1 Protein Homology CDS 13023 13292 . - 0 ID=cds-WP_161671007.1;Parent=gene-L2557_RS06215;Dbxref=GenBank:WP_161671007.1;Name=WP_161671007.1;Ontology_term=GO:0043953,GO:0016020;gbkey=CDS;gene=tatA;go_component=membrane|0016020||IEA;go_process=protein transport by the Tat complex|0043953||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246118.1;locus_tag=L2557_RS06215;product=twin-arginine translocase TatA/TatE family subunit;protein_id=WP_161671007.1;transl_table=11 NZ_JAIKUA010000077.1 RefSeq gene 13418 15055 . - . ID=gene-L2557_RS06220;Name=ubiB;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;locus_tag=L2557_RS06220 NZ_JAIKUA010000077.1 Protein Homology CDS 13418 15055 . - 0 ID=cds-WP_023583497.1;Parent=gene-L2557_RS06220;Dbxref=GenBank:WP_023583497.1;Name=WP_023583497.1;Ontology_term=GO:0006744;gbkey=CDS;gene=ubiB;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246119.1;locus_tag=L2557_RS06220;product=ubiquinone biosynthesis regulatory protein kinase UbiB;protein_id=WP_023583497.1;transl_table=11 NZ_JAIKUA010000077.1 RefSeq gene 15055 15696 . - . ID=gene-L2557_RS06225;Name=L2557_RS06225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06225 NZ_JAIKUA010000077.1 Protein Homology CDS 15055 15696 . - 0 ID=cds-WP_075672295.1;Parent=gene-L2557_RS06225;Dbxref=GenBank:WP_075672295.1;Name=WP_075672295.1;Ontology_term=GO:0006744,GO:0008289,GO:0110142;gbkey=CDS;go_component=ubiquinone biosynthesis complex|0110142||IEA;go_function=lipid binding|0008289||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249527.1;locus_tag=L2557_RS06225;product=ubiquinone biosynthesis accessory factor UbiJ;protein_id=WP_075672295.1;transl_table=11 NZ_JAIKUA010000077.1 RefSeq gene 15698 16453 . - . ID=gene-L2557_RS06230;Name=ubiE;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=L2557_RS06230 NZ_JAIKUA010000077.1 Protein Homology CDS 15698 16453 . - 0 ID=cds-WP_075672293.1;Parent=gene-L2557_RS06230;Dbxref=GenBank:WP_075672293.1;Name=WP_075672293.1;Ontology_term=GO:0008168;gbkey=CDS;gene=ubiE;go_function=methyltransferase activity|0008168||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_019080147.1;locus_tag=L2557_RS06230;product=bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1%2C4-benzoquinol methylase UbiE;protein_id=WP_075672293.1;transl_table=11 NZ_JAIKUA010000077.1 RefSeq gene 16537 17877 . - . ID=gene-L2557_RS06235;Name=rmuC;gbkey=Gene;gene=rmuC;gene_biotype=protein_coding;locus_tag=L2557_RS06235 NZ_JAIKUA010000077.1 Protein Homology CDS 16537 17877 . - 0 ID=cds-WP_075672291.1;Parent=gene-L2557_RS06235;Dbxref=GenBank:WP_075672291.1;Name=WP_075672291.1;gbkey=CDS;gene=rmuC;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246122.1;locus_tag=L2557_RS06235;product=DNA recombination protein RmuC;protein_id=WP_075672291.1;transl_table=11 NZ_JAIKUA010000077.1 RefSeq gene 17980 18510 . - . ID=gene-L2557_RS06240;Name=L2557_RS06240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06240 NZ_JAIKUA010000077.1 Protein Homology CDS 17980 18510 . - 0 ID=cds-WP_075672289.1;Parent=gene-L2557_RS06240;Dbxref=GenBank:WP_075672289.1;Name=WP_075672289.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246124.1;locus_tag=L2557_RS06240;product=DedA family protein;protein_id=WP_075672289.1;transl_table=11 NZ_JAIKUA010000077.1 RefSeq gene 18582 19364 . - . ID=gene-L2557_RS06245;Name=L2557_RS06245;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06245 NZ_JAIKUA010000077.1 Protein Homology CDS 18582 19364 . - 0 ID=cds-WP_075672287.1;Parent=gene-L2557_RS06245;Dbxref=GenBank:WP_075672287.1;Name=WP_075672287.1;Ontology_term=GO:0004721,GO:0004725;gbkey=CDS;go_function=phosphoprotein phosphatase activity|0004721||IEA,protein tyrosine phosphatase activity|0004725||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249528.1;locus_tag=L2557_RS06245;product=tyrosine-protein phosphatase;protein_id=WP_075672287.1;transl_table=11 ##sequence-region NZ_JAIKUA010000078.1 1 11126 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000078.1 RefSeq region 1 11126 . + . ID=NZ_JAIKUA010000078.1:1..11126;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000078.1 RefSeq gene 92 835 . + . ID=gene-L2557_RS06250;Name=L2557_RS06250;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06250 NZ_JAIKUA010000078.1 Protein Homology CDS 92 835 . + 0 ID=cds-WP_075671680.1;Parent=gene-L2557_RS06250;Dbxref=GenBank:WP_075671680.1;Name=WP_075671680.1;Ontology_term=GO:0016491,GO:0070403;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,NAD+ binding|0070403||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250252.1;locus_tag=L2557_RS06250;product=SDR family NAD(P)-dependent oxidoreductase;protein_id=WP_075671680.1;transl_table=11 NZ_JAIKUA010000078.1 RefSeq gene 982 1875 . + . ID=gene-L2557_RS06255;Name=L2557_RS06255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06255 NZ_JAIKUA010000078.1 Protein Homology CDS 982 1875 . + 0 ID=cds-WP_223673887.1;Parent=gene-L2557_RS06255;Dbxref=GenBank:WP_223673887.1;Name=WP_223673887.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012987204.1;locus_tag=L2557_RS06255;product=DMT family transporter;protein_id=WP_223673887.1;transl_table=11 NZ_JAIKUA010000078.1 RefSeq gene 1912 3243 . + . ID=gene-L2557_RS06260;Name=tilS;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=L2557_RS06260 NZ_JAIKUA010000078.1 Protein Homology CDS 1912 3243 . + 0 ID=cds-WP_075671676.1;Parent=gene-L2557_RS06260;Dbxref=GenBank:WP_075671676.1;Name=WP_075671676.1;Ontology_term=GO:0008033,GO:0000166,GO:0005524,GO:0016879;gbkey=CDS;gene=tilS;go_function=nucleotide binding|0000166||IEA,ATP binding|0005524||IEA,ligase activity%2C forming carbon-nitrogen bonds|0016879||IEA;go_process=tRNA processing|0008033||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004257421.1;locus_tag=L2557_RS06260;product=tRNA lysidine(34) synthetase TilS;protein_id=WP_075671676.1;transl_table=11 NZ_JAIKUA010000078.1 RefSeq gene 3277 3537 . - . ID=gene-L2557_RS06265;Name=rof;gbkey=Gene;gene=rof;gene_biotype=protein_coding;locus_tag=L2557_RS06265 NZ_JAIKUA010000078.1 Protein Homology CDS 3277 3537 . - 0 ID=cds-WP_075671674.1;Parent=gene-L2557_RS06265;Dbxref=GenBank:WP_075671674.1;Name=WP_075671674.1;gbkey=CDS;gene=rof;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535873.1;locus_tag=L2557_RS06265;product=Rho-binding antiterminator;protein_id=WP_075671674.1;transl_table=11 NZ_JAIKUA010000078.1 RefSeq gene 3800 4480 . + . ID=gene-L2557_RS06270;Name=nlpE;gbkey=Gene;gene=nlpE;gene_biotype=protein_coding;gene_synonym=cutF;locus_tag=L2557_RS06270 NZ_JAIKUA010000078.1 Protein Homology CDS 3800 4480 . + 0 ID=cds-WP_083629074.1;Parent=gene-L2557_RS06270;Dbxref=GenBank:WP_083629074.1;Name=WP_083629074.1;Note=NlpE%2C an outer membrane lipoprotein%2C interacts directly with CpxA%2C the sensor histidine kinase of the Cpx system for response to envelope stress.;gbkey=CDS;gene=nlpE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628594.1;locus_tag=L2557_RS06270;product=envelope stress response activation lipoprotein NlpE;protein_id=WP_083629074.1;transl_table=11 NZ_JAIKUA010000078.1 RefSeq gene 4573 6288 . - . ID=gene-L2557_RS06275;Name=proS;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=L2557_RS06275 NZ_JAIKUA010000078.1 Protein Homology CDS 4573 6288 . - 0 ID=cds-WP_075671670.1;Parent=gene-L2557_RS06275;Dbxref=GenBank:WP_075671670.1;Name=WP_075671670.1;Ontology_term=GO:0006433,GO:0004827,GO:0005524,GO:0005737;gbkey=CDS;gene=proS;go_component=cytoplasm|0005737||IEA;go_function=proline-tRNA ligase activity|0004827||IEA,ATP binding|0005524||IEA;go_process=prolyl-tRNA aminoacylation|0006433||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535871.1;locus_tag=L2557_RS06275;product=proline--tRNA ligase;protein_id=WP_075671670.1;transl_table=11 NZ_JAIKUA010000078.1 RefSeq gene 6496 7203 . - . ID=gene-L2557_RS06280;Name=tsaA;gbkey=Gene;gene=tsaA;gene_biotype=protein_coding;locus_tag=L2557_RS06280 NZ_JAIKUA010000078.1 Protein Homology CDS 6496 7203 . - 0 ID=cds-WP_099660184.1;Parent=gene-L2557_RS06280;Dbxref=GenBank:WP_099660184.1;Name=WP_099660184.1;Ontology_term=GO:0006400,GO:0008757,GO:0005737;gbkey=CDS;gene=tsaA;go_component=cytoplasm|0005737||IEA;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;go_process=tRNA modification|0006400||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002212157.1;locus_tag=L2557_RS06280;product=tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO;protein_id=WP_099660184.1;transl_table=11 NZ_JAIKUA010000078.1 RefSeq gene 7200 7610 . - . ID=gene-L2557_RS06285;Name=rcsF;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=L2557_RS06285 NZ_JAIKUA010000078.1 Protein Homology CDS 7200 7610 . - 0 ID=cds-WP_083629073.1;Parent=gene-L2557_RS06285;Dbxref=GenBank:WP_083629073.1;Name=WP_083629073.1;gbkey=CDS;gene=rcsF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535868.1;locus_tag=L2557_RS06285;product=Rcs stress response system protein RcsF;protein_id=WP_083629073.1;transl_table=11 NZ_JAIKUA010000078.1 RefSeq gene 7741 8556 . - . ID=gene-L2557_RS06290;Name=L2557_RS06290;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06290 NZ_JAIKUA010000078.1 Protein Homology CDS 7741 8556 . - 0 ID=cds-WP_075671666.1;Parent=gene-L2557_RS06290;Dbxref=GenBank:WP_075671666.1;Name=WP_075671666.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_459249.1;locus_tag=L2557_RS06290;product=MetQ/NlpA family lipoprotein;protein_id=WP_075671666.1;transl_table=11 NZ_JAIKUA010000078.1 RefSeq gene 8623 9276 . - . ID=gene-L2557_RS06295;Name=L2557_RS06295;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06295 NZ_JAIKUA010000078.1 Protein Homology CDS 8623 9276 . - 0 ID=cds-WP_023582692.1;Parent=gene-L2557_RS06295;Dbxref=GenBank:WP_023582692.1;Name=WP_023582692.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005132073.1;locus_tag=L2557_RS06295;product=methionine ABC transporter permease MetI;protein_id=WP_023582692.1;transl_table=11 NZ_JAIKUA010000078.1 RefSeq gene 9269 10300 . - . ID=gene-L2557_RS06300;Name=metN;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=L2557_RS06300 NZ_JAIKUA010000078.1 Protein Homology CDS 9269 10300 . - 0 ID=cds-WP_075671664.1;Parent=gene-L2557_RS06300;Dbxref=GenBank:WP_075671664.1;Name=WP_075671664.1;Ontology_term=GO:0048473,GO:0005524,GO:0033232,GO:0009276;gbkey=CDS;gene=metN;go_component=Gram-negative-bacterium-type cell wall|0009276||IEA;go_function=ATP binding|0005524||IEA,ABC-type D-methionine transporter activity|0033232||IEA;go_process=D-methionine transmembrane transport|0048473||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308228.1;locus_tag=L2557_RS06300;product=methionine ABC transporter ATP-binding protein MetN;protein_id=WP_075671664.1;transl_table=11 NZ_JAIKUA010000078.1 RefSeq gene 10493 11059 . + . ID=gene-L2557_RS06305;Name=gmhB;gbkey=Gene;gene=gmhB;gene_biotype=protein_coding;locus_tag=L2557_RS06305 NZ_JAIKUA010000078.1 Protein Homology CDS 10493 11059 . + 0 ID=cds-WP_075671662.1;Parent=gene-L2557_RS06305;Dbxref=GenBank:WP_075671662.1;Name=WP_075671662.1;Ontology_term=GO:0005975,GO:0016791;gbkey=CDS;gene=gmhB;go_function=phosphatase activity|0016791||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827605.1;locus_tag=L2557_RS06305;product=D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate 7-phosphatase;protein_id=WP_075671662.1;transl_table=11 ##sequence-region NZ_JAIKUA010000079.1 1 1186 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000079.1 RefSeq region 1 1186 . + . ID=NZ_JAIKUA010000079.1:1..1186;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000079.1 RefSeq gene 3 1186 . - . ID=gene-L2557_RS06310;Name=tuf;end_range=1186,.;gbkey=Gene;gene=tuf;gene_biotype=protein_coding;locus_tag=L2557_RS06310;partial=true NZ_JAIKUA010000079.1 Protein Homology CDS 3 1186 . - 2 ID=cds-WP_087803048.1;Parent=gene-L2557_RS06310;Dbxref=GenBank:WP_087803048.1;Name=WP_087803048.1;Ontology_term=GO:0006414,GO:0003746,GO:0005525;end_range=1186,.;gbkey=CDS;gene=tuf;go_function=translation elongation factor activity|0003746||IEA,GTP binding|0005525||IEA;go_process=translational elongation|0006414||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312217.1;locus_tag=L2557_RS06310;partial=true;product=elongation factor Tu;protein_id=WP_087803048.1;transl_table=11 ##sequence-region NZ_JAIKUA010000008.1 1 12711 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000008.1 RefSeq region 1 12711 . + . ID=NZ_JAIKUA010000008.1:1..12711;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000008.1 RefSeq gene 1 180 . - . ID=gene-L2557_RS00605;Name=L2557_RS00605;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00605;partial=true;start_range=.,1 NZ_JAIKUA010000008.1 GeneMarkS-2+ CDS 1 180 . - 0 ID=cds-WP_235409728.1;Parent=gene-L2557_RS00605;Dbxref=GenBank:WP_235409728.1;Name=WP_235409728.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS00605;partial=true;product=hypothetical protein;protein_id=WP_235409728.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000008.1 RefSeq gene 328 1620 . - . ID=gene-L2557_RS00610;Name=thrC;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=L2557_RS00610 NZ_JAIKUA010000008.1 Protein Homology CDS 328 1620 . - 0 ID=cds-WP_235409729.1;Parent=gene-L2557_RS00610;Dbxref=GenBank:WP_235409729.1;Name=WP_235409729.1;Ontology_term=GO:0009088,GO:0004795;gbkey=CDS;gene=thrC;go_function=threonine synthase activity|0004795||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628240.1;locus_tag=L2557_RS00610;product=threonine synthase;protein_id=WP_235409729.1;transl_table=11 NZ_JAIKUA010000008.1 RefSeq gene 1624 2574 . - . ID=gene-L2557_RS00615;Name=thrB;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=L2557_RS00615 NZ_JAIKUA010000008.1 Protein Homology CDS 1624 2574 . - 0 ID=cds-WP_075671351.1;Parent=gene-L2557_RS00615;Dbxref=GenBank:WP_075671351.1;Name=WP_075671351.1;Ontology_term=GO:0009088,GO:0004413,GO:0005524;gbkey=CDS;gene=thrB;go_function=homoserine kinase activity|0004413||IEA,ATP binding|0005524||IEA;go_process=threonine biosynthetic process|0009088||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628239.1;locus_tag=L2557_RS00615;product=homoserine kinase;protein_id=WP_075671351.1;transl_table=11 NZ_JAIKUA010000008.1 RefSeq gene 2556 5015 . - . ID=gene-L2557_RS00620;Name=thrA;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=L2557_RS00620 NZ_JAIKUA010000008.1 Protein Homology CDS 2556 5015 . - 0 ID=cds-WP_099659995.1;Parent=gene-L2557_RS00620;Dbxref=GenBank:WP_099659995.1;Name=WP_099659995.1;Ontology_term=GO:0008652,GO:0009067,GO:0004072,GO:0004412,GO:0050661;gbkey=CDS;gene=thrA;go_function=aspartate kinase activity|0004072||IEA,homoserine dehydrogenase activity|0004412||IEA,NADP binding|0050661||IEA;go_process=amino acid biosynthetic process|0008652||IEA,aspartate family amino acid biosynthetic process|0009067||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_033641811.1;locus_tag=L2557_RS00620;product=bifunctional aspartate kinase/homoserine dehydrogenase I;protein_id=WP_099659995.1;transl_table=11 NZ_JAIKUA010000008.1 cmsearch sequence_feature 5038 5158 . - . ID=id-NZ_JAIKUA010000008.1:5038..5158;Dbxref=RFAM:RF00506;Note=Thr leader region;gbkey=misc_feature;inference=COORDINATES: profile:INFERNAL:1.1.5 NZ_JAIKUA010000008.1 RefSeq gene 5822 6538 . + . ID=gene-L2557_RS00625;Name=arcA;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=L2557_RS00625 NZ_JAIKUA010000008.1 Protein Homology CDS 5822 6538 . + 0 ID=cds-WP_006535263.1;Parent=gene-L2557_RS00625;Dbxref=GenBank:WP_006535263.1;Name=WP_006535263.1;gbkey=CDS;gene=arcA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225009.1;locus_tag=L2557_RS00625;product=two-component system response regulator ArcA;protein_id=WP_006535263.1;transl_table=11 NZ_JAIKUA010000008.1 RefSeq gene 6752 7210 . - . ID=gene-L2557_RS00630;Name=creA;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=L2557_RS00630 NZ_JAIKUA010000008.1 Protein Homology CDS 6752 7210 . - 0 ID=cds-WP_171455359.1;Parent=gene-L2557_RS00630;Dbxref=GenBank:WP_171455359.1;Name=WP_171455359.1;gbkey=CDS;gene=creA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004159792.1;locus_tag=L2557_RS00630;product=protein CreA;protein_id=WP_171455359.1;transl_table=11 NZ_JAIKUA010000008.1 RefSeq gene 7432 8340 . + . ID=gene-L2557_RS00635;Name=robA;gbkey=Gene;gene=robA;gene_biotype=protein_coding;locus_tag=L2557_RS00635 NZ_JAIKUA010000008.1 Protein Homology CDS 7432 8340 . + 0 ID=cds-WP_075671355.1;Parent=gene-L2557_RS00635;Dbxref=GenBank:WP_075671355.1;Name=WP_075671355.1;gbkey=CDS;gene=robA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006657127.1;locus_tag=L2557_RS00635;product=MDR efflux pump AcrAB transcriptional activator RobA;protein_id=WP_075671355.1;transl_table=11 NZ_JAIKUA010000008.1 RefSeq gene 8384 9031 . - . ID=gene-L2557_RS00640;Name=gpmB;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=L2557_RS00640 NZ_JAIKUA010000008.1 Protein Homology CDS 8384 9031 . - 0 ID=cds-WP_109419250.1;Parent=gene-L2557_RS00640;Dbxref=GenBank:WP_109419250.1;Name=WP_109419250.1;Ontology_term=GO:0006096,GO:0004619;gbkey=CDS;gene=gpmB;go_function=phosphoglycerate mutase activity|0004619||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225003.1;locus_tag=L2557_RS00640;product=2%2C3-diphosphoglycerate-dependent phosphoglycerate mutase GpmB;protein_id=WP_109419250.1;transl_table=11 NZ_JAIKUA010000008.1 RefSeq gene 9083 9619 . + . ID=gene-L2557_RS00645;Name=yjjX;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=L2557_RS00645 NZ_JAIKUA010000008.1 Protein Homology CDS 9083 9619 . + 0 ID=cds-WP_023580954.1;Parent=gene-L2557_RS00645;Dbxref=GenBank:WP_023580954.1;Name=WP_023580954.1;gbkey=CDS;gene=yjjX;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004926699.1;locus_tag=L2557_RS00645;product=inosine/xanthosine triphosphatase;protein_id=WP_023580954.1;transl_table=11 NZ_JAIKUA010000008.1 RefSeq gene 9743 10054 . - . ID=gene-L2557_RS00650;Name=trpR;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=L2557_RS00650 NZ_JAIKUA010000008.1 Protein Homology CDS 9743 10054 . - 0 ID=cds-WP_075671359.1;Parent=gene-L2557_RS00650;Dbxref=GenBank:WP_075671359.1;Name=WP_075671359.1;Ontology_term=GO:0006355,GO:0003700,GO:0043565;gbkey=CDS;gene=trpR;go_function=DNA-binding transcription factor activity|0003700||IEA,sequence-specific DNA binding|0043565||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248952.1;locus_tag=L2557_RS00650;product=trp operon repressor;protein_id=WP_075671359.1;transl_table=11 NZ_JAIKUA010000008.1 RefSeq gene 10156 12075 . - . ID=gene-L2557_RS00655;Name=sltY;gbkey=Gene;gene=sltY;gene_biotype=protein_coding;locus_tag=L2557_RS00655 NZ_JAIKUA010000008.1 Protein Homology CDS 10156 12075 . - 0 ID=cds-WP_235409731.1;Parent=gene-L2557_RS00655;Dbxref=GenBank:WP_235409731.1;Name=WP_235409731.1;Ontology_term=GO:0000270,GO:0004553,GO:0008933,GO:0016020,GO:0042597;gbkey=CDS;gene=sltY;go_component=membrane|0016020||IEA,periplasmic space|0042597||IEA;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA,peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245233.1;locus_tag=L2557_RS00655;product=murein transglycosylase;protein_id=WP_235409731.1;transl_table=11 NZ_JAIKUA010000008.1 RefSeq gene 12417 12711 . + . ID=gene-L2557_RS00660;Name=L2557_RS00660;end_range=12711,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00660;partial=true NZ_JAIKUA010000008.1 Protein Homology CDS 12417 12711 . + 0 ID=cds-WP_235409733.1;Parent=gene-L2557_RS00660;Dbxref=GenBank:WP_235409733.1;Name=WP_235409733.1;Ontology_term=GO:0005524;end_range=12711,.;gbkey=CDS;go_function=ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656823.1;locus_tag=L2557_RS00660;partial=true;product=ATP-binding cassette domain-containing protein;protein_id=WP_235409733.1;transl_table=11 ##sequence-region NZ_JAIKUA010000080.1 1 10228 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000080.1 RefSeq region 1 10228 . + . ID=NZ_JAIKUA010000080.1:1..10228;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000080.1 RefSeq gene 41 292 . + . ID=gene-L2557_RS06315;Name=L2557_RS06315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06315 NZ_JAIKUA010000080.1 Protein Homology CDS 41 292 . + 0 ID=cds-WP_075673608.1;Parent=gene-L2557_RS06315;Dbxref=GenBank:WP_075673608.1;Name=WP_075673608.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246207.1;locus_tag=L2557_RS06315;product=YdgH/BhsA/McbA-like domain containing protein;protein_id=WP_075673608.1;transl_table=11 NZ_JAIKUA010000080.1 RefSeq gene 407 847 . + . ID=gene-L2557_RS06320;Name=L2557_RS06320;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06320 NZ_JAIKUA010000080.1 Protein Homology CDS 407 847 . + 0 ID=cds-WP_075673607.1;Parent=gene-L2557_RS06320;Dbxref=GenBank:WP_075673607.1;Name=WP_075673607.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628759.1;locus_tag=L2557_RS06320;product=YhbP family protein;protein_id=WP_075673607.1;transl_table=11 NZ_JAIKUA010000080.1 RefSeq gene 871 1233 . - . ID=gene-L2557_RS06325;Name=L2557_RS06325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06325 NZ_JAIKUA010000080.1 Protein Homology CDS 871 1233 . - 0 ID=cds-WP_098944020.1;Parent=gene-L2557_RS06325;Dbxref=GenBank:WP_098944020.1;Name=WP_098944020.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368742.1;locus_tag=L2557_RS06325;product=hypothetical protein;protein_id=WP_098944020.1;transl_table=11 NZ_JAIKUA010000080.1 RefSeq gene 1395 1604 . - . ID=gene-L2557_RS06330;Name=L2557_RS06330;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06330 NZ_JAIKUA010000080.1 Protein Homology CDS 1395 1604 . - 0 ID=cds-WP_075673606.1;Parent=gene-L2557_RS06330;Dbxref=GenBank:WP_075673606.1;Name=WP_075673606.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249586.1;locus_tag=L2557_RS06330;product=hypothetical protein;protein_id=WP_075673606.1;transl_table=11 NZ_JAIKUA010000080.1 RefSeq gene 1631 2095 . - . ID=gene-L2557_RS06335;Name=nrdG;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=L2557_RS06335 NZ_JAIKUA010000080.1 Protein Homology CDS 1631 2095 . - 0 ID=cds-WP_075673605.1;Parent=gene-L2557_RS06335;Dbxref=GenBank:WP_075673605.1;Name=WP_075673605.1;Ontology_term=GO:0043365,GO:0051539;gbkey=CDS;gene=nrdG;go_function=[formate-C-acetyltransferase]-activating enzyme activity|0043365||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005156200.1;locus_tag=L2557_RS06335;product=anaerobic ribonucleoside-triphosphate reductase-activating protein;protein_id=WP_075673605.1;transl_table=11 NZ_JAIKUA010000080.1 RefSeq gene 2100 4238 . - . ID=gene-L2557_RS06340;Name=nrdD;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=L2557_RS06340 NZ_JAIKUA010000080.1 Protein Homology CDS 2100 4238 . - 0 ID=cds-WP_235409939.1;Parent=gene-L2557_RS06340;Dbxref=GenBank:WP_235409939.1;Name=WP_235409939.1;Ontology_term=GO:0006260,GO:0008998;gbkey=CDS;gene=nrdD;go_function=ribonucleoside-triphosphate reductase (thioredoxin) activity|0008998||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006323315.1;locus_tag=L2557_RS06340;product=anaerobic ribonucleoside-triphosphate reductase;protein_id=WP_235409939.1;transl_table=11 NZ_JAIKUA010000080.1 RefSeq gene 4583 4969 . - . ID=gene-L2557_RS06345;Name=L2557_RS06345;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06345 NZ_JAIKUA010000080.1 Protein Homology CDS 4583 4969 . - 0 ID=cds-WP_006535650.1;Parent=gene-L2557_RS06345;Dbxref=GenBank:WP_006535650.1;Name=WP_006535650.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252966.1;locus_tag=L2557_RS06345;product=RidA family protein;protein_id=WP_006535650.1;transl_table=11 NZ_JAIKUA010000080.1 RefSeq gene 5291 5749 . - . ID=gene-L2557_RS06350;Name=pyrI;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=L2557_RS06350 NZ_JAIKUA010000080.1 Protein Homology CDS 5291 5749 . - 0 ID=cds-WP_006535648.1;Parent=gene-L2557_RS06350;Dbxref=GenBank:WP_006535648.1;Name=WP_006535648.1;Ontology_term=GO:0006207,GO:0009347;gbkey=CDS;gene=pyrI;go_component=aspartate carbamoyltransferase complex|0009347||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246198.1;locus_tag=L2557_RS06350;product=aspartate carbamoyltransferase regulatory subunit;protein_id=WP_006535648.1;transl_table=11 NZ_JAIKUA010000080.1 RefSeq gene 5763 6698 . - . ID=gene-L2557_RS06355;Name=pyrB;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=L2557_RS06355 NZ_JAIKUA010000080.1 Protein Homology CDS 5763 6698 . - 0 ID=cds-WP_075673603.1;Parent=gene-L2557_RS06355;Dbxref=GenBank:WP_075673603.1;Name=WP_075673603.1;Ontology_term=GO:0006207,GO:0004070;gbkey=CDS;gene=pyrB;go_function=aspartate carbamoyltransferase activity|0004070||IEA;go_process='de novo' pyrimidine nucleobase biosynthetic process|0006207||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210111.1;locus_tag=L2557_RS06355;product=aspartate carbamoyltransferase;protein_id=WP_075673603.1;transl_table=11 NZ_JAIKUA010000080.1 RefSeq gene 6698 6868 . - . ID=gene-L2557_RS06360;Name=L2557_RS06360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06360 NZ_JAIKUA010000080.1 GeneMarkS-2+ CDS 6698 6868 . - 0 ID=cds-WP_164530178.1;Parent=gene-L2557_RS06360;Dbxref=GenBank:WP_164530178.1;Name=WP_164530178.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS06360;product=hypothetical protein;protein_id=WP_164530178.1;transl_table=11 NZ_JAIKUA010000080.1 RefSeq gene 7048 8052 . - . ID=gene-L2557_RS06365;Name=argF;gbkey=Gene;gene=argF;gene_biotype=protein_coding;locus_tag=L2557_RS06365 NZ_JAIKUA010000080.1 Protein Homology CDS 7048 8052 . - 0 ID=cds-WP_099660266.1;Parent=gene-L2557_RS06365;Dbxref=GenBank:WP_099660266.1;Name=WP_099660266.1;Ontology_term=GO:0042450,GO:0004585;gbkey=CDS;gene=argF;go_function=ornithine carbamoyltransferase activity|0004585||IEA;go_process=L-arginine biosynthetic process via ornithine|0042450||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246195.1;locus_tag=L2557_RS06365;product=ornithine carbamoyltransferase;protein_id=WP_099660266.1;transl_table=11 NZ_JAIKUA010000080.1 RefSeq gene 8237 8668 . + . ID=gene-L2557_RS06370;Name=rraB;gbkey=Gene;gene=rraB;gene_biotype=protein_coding;locus_tag=L2557_RS06370 NZ_JAIKUA010000080.1 Protein Homology CDS 8237 8668 . + 0 ID=cds-WP_099660265.1;Parent=gene-L2557_RS06370;Dbxref=GenBank:WP_099660265.1;Name=WP_099660265.1;gbkey=CDS;gene=rraB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628757.1;locus_tag=L2557_RS06370;product=ribonuclease E inhibitor RraB;protein_id=WP_099660265.1;transl_table=11 NZ_JAIKUA010000080.1 RefSeq gene 8775 9644 . - . ID=gene-L2557_RS06375;Name=L2557_RS06375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06375 NZ_JAIKUA010000080.1 Protein Homology CDS 8775 9644 . - 0 ID=cds-WP_099660264.1;Parent=gene-L2557_RS06375;Dbxref=GenBank:WP_099660264.1;Name=WP_099660264.1;Ontology_term=GO:0046872;gbkey=CDS;go_function=metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252957.1;locus_tag=L2557_RS06375;product=pirin family protein;protein_id=WP_099660264.1;transl_table=11 NZ_JAIKUA010000080.1 RefSeq gene 9990 10157 . - . ID=gene-L2557_RS06380;Name=L2557_RS06380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06380 NZ_JAIKUA010000080.1 Protein Homology CDS 9990 10157 . - 0 ID=cds-WP_036914671.1;Parent=gene-L2557_RS06380;Dbxref=GenBank:WP_036914671.1;Name=WP_036914671.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535641.1;locus_tag=L2557_RS06380;product=YhfL family protein;protein_id=WP_036914671.1;transl_table=11 ##sequence-region NZ_JAIKUA010000081.1 1 5999 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000081.1 RefSeq region 1 5999 . + . ID=NZ_JAIKUA010000081.1:1..5999;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000081.1 RefSeq gene 1 4232 . - . ID=gene-L2557_RS06385;Name=L2557_RS06385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06385;partial=true;start_range=.,1 NZ_JAIKUA010000081.1 Protein Homology CDS 1 4232 . - 0 ID=cds-WP_235409940.1;Parent=gene-L2557_RS06385;Dbxref=GenBank:WP_235409940.1;Name=WP_235409940.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF017658.6;locus_tag=L2557_RS06385;partial=true;product=two-partner secretion domain-containing protein;protein_id=WP_235409940.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000081.1 RefSeq gene 4312 5999 . - . ID=gene-L2557_RS06390;Name=L2557_RS06390;end_range=5999,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06390;partial=true NZ_JAIKUA010000081.1 Protein Homology CDS 4312 5999 . - 2 ID=cds-WP_235409941.1;Parent=gene-L2557_RS06390;Dbxref=GenBank:WP_235409941.1;Name=WP_235409941.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;end_range=5999,.;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537291.1;locus_tag=L2557_RS06390;partial=true;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_235409941.1;transl_table=11 ##sequence-region NZ_JAIKUA010000082.1 1 9683 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000082.1 RefSeq region 1 9683 . + . ID=NZ_JAIKUA010000082.1:1..9683;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000082.1 RefSeq gene 352 1989 . + . ID=gene-L2557_RS06395;Name=pyrG;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=L2557_RS06395 NZ_JAIKUA010000082.1 Protein Homology CDS 352 1989 . + 0 ID=cds-WP_075673391.1;Parent=gene-L2557_RS06395;Dbxref=GenBank:WP_075673391.1;Name=WP_075673391.1;Ontology_term=GO:0006221,GO:0003883;gbkey=CDS;gene=pyrG;go_function=CTP synthase activity|0003883||IEA;go_process=pyrimidine nucleotide biosynthetic process|0006221||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209376.1;locus_tag=L2557_RS06395;product=glutamine hydrolyzing CTP synthase;protein_id=WP_075673391.1;transl_table=11 NZ_JAIKUA010000082.1 RefSeq gene 2052 3353 . + . ID=gene-L2557_RS06400;Name=eno;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=L2557_RS06400 NZ_JAIKUA010000082.1 Protein Homology CDS 2052 3353 . + 0 ID=cds-WP_075673392.1;Parent=gene-L2557_RS06400;Dbxref=GenBank:WP_075673392.1;Name=WP_075673392.1;Ontology_term=GO:0006096,GO:0000287,GO:0004634,GO:0000015;gbkey=CDS;gene=eno;go_component=phosphopyruvate hydratase complex|0000015||IEA;go_function=magnesium ion binding|0000287||IEA,phosphopyruvate hydratase activity|0004634||IEA;go_process=glycolytic process|0006096||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_461873.1;locus_tag=L2557_RS06400;product=phosphopyruvate hydratase;protein_id=WP_075673392.1;transl_table=11 NZ_JAIKUA010000082.1 RefSeq gene 3675 5057 . + . ID=gene-L2557_RS06405;Name=L2557_RS06405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06405 NZ_JAIKUA010000082.1 Protein Homology CDS 3675 5057 . + 0 ID=cds-WP_004247295.1;Parent=gene-L2557_RS06405;Dbxref=GenBank:WP_004247295.1;Name=WP_004247295.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247295.1;locus_tag=L2557_RS06405;product=SLC13 family permease;protein_id=WP_004247295.1;transl_table=11 NZ_JAIKUA010000082.1 RefSeq gene 5305 6639 . - . ID=gene-L2557_RS06410;Name=mltD;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=L2557_RS06410 NZ_JAIKUA010000082.1 Protein Homology CDS 5305 6639 . - 0 ID=cds-WP_075673393.1;Parent=gene-L2557_RS06410;Dbxref=GenBank:WP_075673393.1;Name=WP_075673393.1;Ontology_term=GO:0000270,GO:0008933,GO:0016020;gbkey=CDS;gene=mltD;go_component=membrane|0016020||IEA;go_function=peptidoglycan lytic transglycosylase activity|0008933||IEA;go_process=peptidoglycan metabolic process|0000270||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012989458.1;locus_tag=L2557_RS06410;product=murein transglycosylase D;protein_id=WP_075673393.1;transl_table=11 NZ_JAIKUA010000082.1 RefSeq gene 6715 7470 . - . ID=gene-L2557_RS06415;Name=gloB;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=L2557_RS06415 NZ_JAIKUA010000082.1 Protein Homology CDS 6715 7470 . - 0 ID=cds-WP_075673394.1;Parent=gene-L2557_RS06415;Dbxref=GenBank:WP_075673394.1;Name=WP_075673394.1;Ontology_term=GO:0019243,GO:0004416;gbkey=CDS;gene=gloB;go_function=hydroxyacylglutathione hydrolase activity|0004416||IEA;go_process=methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione|0019243||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244977.1;locus_tag=L2557_RS06415;product=hydroxyacylglutathione hydrolase;protein_id=WP_075673394.1;transl_table=11 NZ_JAIKUA010000082.1 RefSeq gene 7509 8225 . + . ID=gene-L2557_RS06420;Name=L2557_RS06420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06420 NZ_JAIKUA010000082.1 Protein Homology CDS 7509 8225 . + 0 ID=cds-WP_075673395.1;Parent=gene-L2557_RS06420;Dbxref=GenBank:WP_075673395.1;Name=WP_075673395.1;Ontology_term=GO:0008757;gbkey=CDS;go_function=S-adenosylmethionine-dependent methyltransferase activity|0008757||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534926.1;locus_tag=L2557_RS06420;product=methyltransferase domain-containing protein;protein_id=WP_075673395.1;transl_table=11 NZ_JAIKUA010000082.1 RefSeq gene 8230 8718 . - . ID=gene-L2557_RS06425;Name=rnhA;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=L2557_RS06425 NZ_JAIKUA010000082.1 Protein Homology CDS 8230 8718 . - 0 ID=cds-WP_075673396.1;Parent=gene-L2557_RS06425;Dbxref=GenBank:WP_075673396.1;Name=WP_075673396.1;Ontology_term=GO:0003676,GO:0004523;gbkey=CDS;gene=rnhA;go_function=nucleic acid binding|0003676||IEA,RNA-DNA hybrid ribonuclease activity|0004523||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244975.1;locus_tag=L2557_RS06425;product=ribonuclease HI;protein_id=WP_075673396.1;transl_table=11 NZ_JAIKUA010000082.1 RefSeq gene 8784 9536 . + . ID=gene-L2557_RS06430;Name=dnaQ;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=L2557_RS06430 NZ_JAIKUA010000082.1 Protein Homology CDS 8784 9536 . + 0 ID=cds-WP_075673397.1;Parent=gene-L2557_RS06430;Dbxref=GenBank:WP_075673397.1;Name=WP_075673397.1;Ontology_term=GO:0006260,GO:0003677,GO:0003887;gbkey=CDS;gene=dnaQ;go_function=DNA binding|0003677||IEA,DNA-directed DNA polymerase activity|0003887||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367515.1;locus_tag=L2557_RS06430;product=DNA polymerase III subunit epsilon;protein_id=WP_075673397.1;transl_table=11 ##sequence-region NZ_JAIKUA010000083.1 1 20806 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000083.1 RefSeq region 1 20806 . + . ID=NZ_JAIKUA010000083.1:1..20806;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000083.1 RefSeq gene 223 3165 . - . ID=gene-L2557_RS06435;Name=copA;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=L2557_RS06435 NZ_JAIKUA010000083.1 Protein Homology CDS 223 3165 . - 0 ID=cds-WP_235409942.1;Parent=gene-L2557_RS06435;Dbxref=GenBank:WP_235409942.1;Name=WP_235409942.1;Ontology_term=GO:0006812,GO:0019829;gbkey=CDS;gene=copA;go_function=ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368272.1;locus_tag=L2557_RS06435;product=copper-exporting P-type ATPase CopA;protein_id=WP_235409942.1;transl_table=11 NZ_JAIKUA010000083.1 RefSeq gene 3298 3711 . + . ID=gene-L2557_RS06440;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=L2557_RS06440 NZ_JAIKUA010000083.1 Protein Homology CDS 3298 3711 . + 0 ID=cds-WP_075673930.1;Parent=gene-L2557_RS06440;Dbxref=GenBank:WP_075673930.1;Name=WP_075673930.1;Ontology_term=GO:0045893,GO:0046688,GO:0003677,GO:0003700,GO:0005507;gbkey=CDS;gene=cueR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,copper ion binding|0005507||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004873361.1;locus_tag=L2557_RS06440;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_075673930.1;transl_table=11 NZ_JAIKUA010000083.1 RefSeq gene 3665 4153 . - . ID=gene-L2557_RS06445;Name=L2557_RS06445;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06445 NZ_JAIKUA010000083.1 Protein Homology CDS 3665 4153 . - 0 ID=cds-WP_075673931.1;Parent=gene-L2557_RS06445;Dbxref=GenBank:WP_075673931.1;Name=WP_075673931.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533997.1;locus_tag=L2557_RS06445;product=NfeD family protein;protein_id=WP_075673931.1;transl_table=11 NZ_JAIKUA010000083.1 RefSeq gene 4156 5079 . - . ID=gene-L2557_RS06450;Name=L2557_RS06450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06450 NZ_JAIKUA010000083.1 Protein Homology CDS 4156 5079 . - 0 ID=cds-WP_075673932.1;Parent=gene-L2557_RS06450;Dbxref=GenBank:WP_075673932.1;Name=WP_075673932.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533996.1;locus_tag=L2557_RS06450;product=SPFH domain-containing protein;protein_id=WP_075673932.1;transl_table=11 NZ_JAIKUA010000083.1 RefSeq gene 5117 5974 . - . ID=gene-L2557_RS06455;Name=L2557_RS06455;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06455 NZ_JAIKUA010000083.1 Protein Homology CDS 5117 5974 . - 0 ID=cds-WP_075673933.1;Parent=gene-L2557_RS06455;Dbxref=GenBank:WP_075673933.1;Name=WP_075673933.1;Ontology_term=GO:0006457,GO:0034599,GO:0005515,GO:0051082;gbkey=CDS;go_function=protein binding|0005515||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA,cellular response to oxidative stress|0034599||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017627896.1;locus_tag=L2557_RS06455;product=co-chaperone YbbN;protein_id=WP_075673933.1;transl_table=11 NZ_JAIKUA010000083.1 RefSeq gene 6059 6844 . - . ID=gene-L2557_RS06460;Name=L2557_RS06460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06460 NZ_JAIKUA010000083.1 Protein Homology CDS 6059 6844 . - 0 ID=cds-WP_223673928.1;Parent=gene-L2557_RS06460;Dbxref=GenBank:WP_223673928.1;Name=WP_223673928.1;Ontology_term=GO:0016491;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244260.1;locus_tag=L2557_RS06460;product=SDR family oxidoreductase;protein_id=WP_223673928.1;transl_table=11 NZ_JAIKUA010000083.1 RefSeq gene 6895 7524 . - . ID=gene-L2557_RS06465;Name=tesA;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=L2557_RS06465 NZ_JAIKUA010000083.1 Protein Homology CDS 6895 7524 . - 0 ID=cds-WP_075673935.1;Parent=gene-L2557_RS06465;Dbxref=GenBank:WP_075673935.1;Name=WP_075673935.1;Ontology_term=GO:0006629,GO:0016298;gbkey=CDS;gene=tesA;go_function=lipase activity|0016298||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827225.1;locus_tag=L2557_RS06465;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=WP_075673935.1;transl_table=11 NZ_JAIKUA010000083.1 RefSeq gene 7495 8181 . + . ID=gene-L2557_RS06470;Name=ybbA;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=L2557_RS06470 NZ_JAIKUA010000083.1 Protein Homology CDS 7495 8181 . + 0 ID=cds-WP_075673936.1;Parent=gene-L2557_RS06470;Dbxref=GenBank:WP_075673936.1;Name=WP_075673936.1;gbkey=CDS;gene=ybbA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533992.1;locus_tag=L2557_RS06470;product=putative ABC transporter ATP-binding protein YbbA;protein_id=WP_075673936.1;transl_table=11 NZ_JAIKUA010000083.1 RefSeq gene 8178 10619 . + . ID=gene-L2557_RS06475;Name=ybbP;gbkey=Gene;gene=ybbP;gene_biotype=protein_coding;locus_tag=L2557_RS06475 NZ_JAIKUA010000083.1 Protein Homology CDS 8178 10619 . + 0 ID=cds-WP_099660092.1;Parent=gene-L2557_RS06475;Dbxref=GenBank:WP_099660092.1;Name=WP_099660092.1;gbkey=CDS;gene=ybbP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244257.1;locus_tag=L2557_RS06475;product=putative ABC transporter permease subunit YbbP;protein_id=WP_099660092.1;transl_table=11 NZ_JAIKUA010000083.1 RefSeq gene 10708 12870 . - . ID=gene-L2557_RS06480;Name=L2557_RS06480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06480 NZ_JAIKUA010000083.1 Protein Homology CDS 10708 12870 . - 0 ID=cds-WP_099660128.1;Parent=gene-L2557_RS06480;Dbxref=GenBank:WP_099660128.1;Name=WP_099660128.1;Ontology_term=GO:0006596,GO:0016831;gbkey=CDS;go_function=carboxy-lyase activity|0016831||IEA;go_process=polyamine biosynthetic process|0006596||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004093443.1;locus_tag=L2557_RS06480;product=ornithine decarboxylase;protein_id=WP_099660128.1;transl_table=11 NZ_JAIKUA010000083.1 RefSeq gene 13047 14072 . - . ID=gene-L2557_RS06485;Name=L2557_RS06485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06485 NZ_JAIKUA010000083.1 Protein Homology CDS 13047 14072 . - 0 ID=cds-WP_075673939.1;Parent=gene-L2557_RS06485;Dbxref=GenBank:WP_075673939.1;Name=WP_075673939.1;Ontology_term=GO:0055085,GO:0008381,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=mechanosensitive monoatomic ion channel activity|0008381||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244256.1;locus_tag=L2557_RS06485;product=mechanosensitive ion channel family protein;protein_id=WP_075673939.1;transl_table=11 NZ_JAIKUA010000083.1 RefSeq gene 14140 15399 . - . ID=gene-L2557_RS06490;Name=L2557_RS06490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06490 NZ_JAIKUA010000083.1 Protein Homology CDS 14140 15399 . - 0 ID=cds-WP_156733950.1;Parent=gene-L2557_RS06490;Dbxref=GenBank:WP_156733950.1;Name=WP_156733950.1;Ontology_term=GO:0055085,GO:0022857,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244255.1;locus_tag=L2557_RS06490;product=MFS transporter;protein_id=WP_156733950.1;transl_table=11 NZ_JAIKUA010000083.1 RefSeq gene 15523 16590 . - . ID=gene-L2557_RS06495;Name=purK;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=L2557_RS06495 NZ_JAIKUA010000083.1 Protein Homology CDS 15523 16590 . - 0 ID=cds-WP_075673941.1;Parent=gene-L2557_RS06495;Dbxref=GenBank:WP_075673941.1;Name=WP_075673941.1;Ontology_term=GO:0006189,GO:0004638,GO:0005524,GO:0046872;gbkey=CDS;gene=purK;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA,ATP binding|0005524||IEA,metal ion binding|0046872||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368269.1;locus_tag=L2557_RS06495;product=5-(carboxyamino)imidazole ribonucleotide synthase;protein_id=WP_075673941.1;transl_table=11 NZ_JAIKUA010000083.1 RefSeq gene 16587 17108 . - . ID=gene-L2557_RS06500;Name=purE;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=L2557_RS06500 NZ_JAIKUA010000083.1 Protein Homology CDS 16587 17108 . - 0 ID=cds-WP_075673942.1;Parent=gene-L2557_RS06500;Dbxref=GenBank:WP_075673942.1;Name=WP_075673942.1;Ontology_term=GO:0006189,GO:0009152,GO:0004638,GO:0009320;gbkey=CDS;gene=purE;go_component=phosphoribosylaminoimidazole carboxylase complex|0009320||IEA;go_function=phosphoribosylaminoimidazole carboxylase activity|0004638||IEA;go_process='de novo' IMP biosynthetic process|0006189||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250303.1;locus_tag=L2557_RS06500;product=5-(carboxyamino)imidazole ribonucleotide mutase;protein_id=WP_075673942.1;transl_table=11 NZ_JAIKUA010000083.1 RefSeq gene 17243 17965 . - . ID=gene-L2557_RS06505;Name=L2557_RS06505;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06505 NZ_JAIKUA010000083.1 Protein Homology CDS 17243 17965 . - 0 ID=cds-WP_196563830.1;Parent=gene-L2557_RS06505;Dbxref=GenBank:WP_196563830.1;Name=WP_196563830.1;Ontology_term=GO:0009245,GO:0016462;gbkey=CDS;go_function=pyrophosphatase activity|0016462||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827223.1;locus_tag=L2557_RS06505;product=UDP-2%2C3-diacylglucosamine diphosphatase;protein_id=WP_196563830.1;transl_table=11 NZ_JAIKUA010000083.1 RefSeq gene 17978 18472 . - . ID=gene-L2557_RS06510;Name=ppiB;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=L2557_RS06510 NZ_JAIKUA010000083.1 Protein Homology CDS 17978 18472 . - 0 ID=cds-WP_036934689.1;Parent=gene-L2557_RS06510;Dbxref=GenBank:WP_036934689.1;Name=WP_036934689.1;gbkey=CDS;gene=ppiB;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225530.1;locus_tag=L2557_RS06510;product=peptidylprolyl isomerase B;protein_id=WP_036934689.1;transl_table=11 NZ_JAIKUA010000083.1 RefSeq gene 18848 20239 . + . ID=gene-L2557_RS06515;Name=cysS;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=L2557_RS06515 NZ_JAIKUA010000083.1 Protein Homology CDS 18848 20239 . + 0 ID=cds-WP_075673944.1;Parent=gene-L2557_RS06515;Dbxref=GenBank:WP_075673944.1;Name=WP_075673944.1;Ontology_term=GO:0006423,GO:0004817,GO:0005524,GO:0005737;gbkey=CDS;gene=cysS;go_component=cytoplasm|0005737||IEA;go_function=cysteine-tRNA ligase activity|0004817||IEA,ATP binding|0005524||IEA;go_process=cysteinyl-tRNA aminoacylation|0006423||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244247.1;locus_tag=L2557_RS06515;product=cysteine--tRNA ligase;protein_id=WP_075673944.1;transl_table=11 NZ_JAIKUA010000083.1 RefSeq gene 20329 20806 . - . ID=gene-L2557_RS06520;Name=L2557_RS06520;end_range=20806,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06520;partial=true NZ_JAIKUA010000083.1 GeneMarkS-2+ CDS 20329 20806 . - 1 ID=cds-WP_235409943.1;Parent=gene-L2557_RS06520;Dbxref=GenBank:WP_235409943.1;Name=WP_235409943.1;end_range=20806,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS06520;partial=true;product=hypothetical protein;protein_id=WP_235409943.1;transl_table=11 ##sequence-region NZ_JAIKUA010000084.1 1 11289 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000084.1 RefSeq region 1 11289 . + . ID=NZ_JAIKUA010000084.1:1..11289;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000084.1 RefSeq gene 1 411 . - . ID=gene-L2557_RS06525;Name=L2557_RS06525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06525;partial=true;start_range=.,1 NZ_JAIKUA010000084.1 Protein Homology CDS 1 411 . - 0 ID=cds-WP_328253085.1;Parent=gene-L2557_RS06525;Dbxref=GenBank:WP_328253085.1;Name=WP_328253085.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248545.1;locus_tag=L2557_RS06525;partial=true;product=biotin/lipoyl-containing protein;protein_id=WP_328253085.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000084.1 RefSeq gene 424 3090 . - . ID=gene-L2557_RS06530;Name=aceE;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=L2557_RS06530 NZ_JAIKUA010000084.1 Protein Homology CDS 424 3090 . - 0 ID=cds-WP_075670828.1;Parent=gene-L2557_RS06530;Dbxref=GenBank:WP_075670828.1;Name=WP_075670828.1;Ontology_term=GO:0006086,GO:0004739,GO:0045254;gbkey=CDS;gene=aceE;go_component=pyruvate dehydrogenase complex|0045254||IEA;go_function=pyruvate dehydrogenase (acetyl-transferring) activity|0004739||IEA;go_process=pyruvate decarboxylation to acetyl-CoA|0006086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008814576.1;locus_tag=L2557_RS06530;product=pyruvate dehydrogenase (acetyl-transferring)%2C homodimeric type;protein_id=WP_075670828.1;transl_table=11 NZ_JAIKUA010000084.1 RefSeq gene 3254 4024 . - . ID=gene-L2557_RS06535;Name=pdhR;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=L2557_RS06535 NZ_JAIKUA010000084.1 Protein Homology CDS 3254 4024 . - 0 ID=cds-WP_075670940.1;Parent=gene-L2557_RS06535;Dbxref=GenBank:WP_075670940.1;Name=WP_075670940.1;gbkey=CDS;gene=pdhR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368227.1;locus_tag=L2557_RS06535;product=pyruvate dehydrogenase complex transcriptional repressor PdhR;protein_id=WP_075670940.1;transl_table=11 NZ_JAIKUA010000084.1 RefSeq gene 4350 4892 . - . ID=gene-L2557_RS06540;Name=ampD;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=L2557_RS06540 NZ_JAIKUA010000084.1 Protein Homology CDS 4350 4892 . - 0 ID=cds-WP_075670826.1;Parent=gene-L2557_RS06540;Dbxref=GenBank:WP_075670826.1;Name=WP_075670826.1;Ontology_term=GO:0009253,GO:0008745;gbkey=CDS;gene=ampD;go_function=N-acetylmuramoyl-L-alanine amidase activity|0008745||IEA;go_process=peptidoglycan catabolic process|0009253||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017627935.1;locus_tag=L2557_RS06540;product=1%2C6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD;protein_id=WP_075670826.1;transl_table=11 NZ_JAIKUA010000084.1 RefSeq gene 5103 5546 . + . ID=gene-L2557_RS06545;Name=ppdD;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=L2557_RS06545 NZ_JAIKUA010000084.1 Protein Homology CDS 5103 5546 . + 0 ID=cds-WP_075670824.1;Parent=gene-L2557_RS06545;Dbxref=GenBank:WP_075670824.1;Name=WP_075670824.1;gbkey=CDS;gene=ppdD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248548.1;locus_tag=L2557_RS06545;product=prepilin peptidase-dependent pilin;protein_id=WP_075670824.1;transl_table=11 NZ_JAIKUA010000084.1 RefSeq gene 5648 6748 . + . ID=gene-L2557_RS06550;Name=L2557_RS06550;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06550 NZ_JAIKUA010000084.1 Protein Homology CDS 5648 6748 . + 0 ID=cds-WP_075670822.1;Parent=gene-L2557_RS06550;Dbxref=GenBank:WP_075670822.1;Name=WP_075670822.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533726.1;locus_tag=L2557_RS06550;product=ATPase%2C T2SS/T4P/T4SS family;protein_id=WP_075670822.1;transl_table=11 NZ_JAIKUA010000084.1 RefSeq gene 6745 7944 . + . ID=gene-L2557_RS06555;Name=L2557_RS06555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06555 NZ_JAIKUA010000084.1 Protein Homology CDS 6745 7944 . + 0 ID=cds-WP_099659319.1;Parent=gene-L2557_RS06555;Dbxref=GenBank:WP_099659319.1;Name=WP_099659319.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244086.1;locus_tag=L2557_RS06555;product=type II secretion system F family protein;protein_id=WP_099659319.1;transl_table=11 NZ_JAIKUA010000084.1 RefSeq gene 8179 8802 . + . ID=gene-L2557_RS06560;Name=coaE;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=L2557_RS06560 NZ_JAIKUA010000084.1 Protein Homology CDS 8179 8802 . + 0 ID=cds-WP_075670818.1;Parent=gene-L2557_RS06560;Dbxref=GenBank:WP_075670818.1;Name=WP_075670818.1;Note=Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis.;Ontology_term=GO:0015937,GO:0004140,GO:0005524,GO:0005737;gbkey=CDS;gene=coaE;go_component=cytoplasm|0005737||IEA;go_function=dephospho-CoA kinase activity|0004140||IEA,ATP binding|0005524||IEA;go_process=coenzyme A biosynthetic process|0015937||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533731.1;locus_tag=L2557_RS06560;product=dephospho-CoA kinase;protein_id=WP_075670818.1;transl_table=11 NZ_JAIKUA010000084.1 RefSeq gene 8795 9547 . + . ID=gene-L2557_RS06565;Name=zapD;gbkey=Gene;gene=zapD;gene_biotype=protein_coding;locus_tag=L2557_RS06565 NZ_JAIKUA010000084.1 Protein Homology CDS 8795 9547 . + 0 ID=cds-WP_075670816.1;Parent=gene-L2557_RS06565;Dbxref=GenBank:WP_075670816.1;Name=WP_075670816.1;gbkey=CDS;gene=zapD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244089.1;locus_tag=L2557_RS06565;product=cell division protein ZapD;protein_id=WP_075670816.1;transl_table=11 NZ_JAIKUA010000084.1 RefSeq gene 9602 9814 . + . ID=gene-L2557_RS06570;Name=yacG;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=L2557_RS06570 NZ_JAIKUA010000084.1 Protein Homology CDS 9602 9814 . + 0 ID=cds-WP_075670814.1;Parent=gene-L2557_RS06570;Dbxref=GenBank:WP_075670814.1;Name=WP_075670814.1;Ontology_term=GO:0006355,GO:0008270;gbkey=CDS;gene=yacG;go_function=zinc ion binding|0008270||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244091.1;locus_tag=L2557_RS06570;product=DNA gyrase inhibitor YacG;protein_id=WP_075670814.1;transl_table=11 NZ_JAIKUA010000084.1 RefSeq gene 9901 10293 . - . ID=gene-L2557_RS06575;Name=mutT;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=L2557_RS06575 NZ_JAIKUA010000084.1 Protein Homology CDS 9901 10293 . - 0 ID=cds-WP_075670812.1;Parent=gene-L2557_RS06575;Dbxref=GenBank:WP_075670812.1;Name=WP_075670812.1;Ontology_term=GO:0006281,GO:0008413;gbkey=CDS;gene=mutT;go_function=8-oxo-7%2C8-dihydroguanosine triphosphate pyrophosphatase activity|0008413||IEA;go_process=DNA repair|0006281||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010845548.1;locus_tag=L2557_RS06575;product=8-oxo-dGTP diphosphatase MutT;protein_id=WP_075670812.1;transl_table=11 NZ_JAIKUA010000084.1 RefSeq gene 10400 11289 . - . ID=gene-L2557_RS06580;Name=L2557_RS06580;end_range=11289,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06580;partial=true NZ_JAIKUA010000084.1 Protein Homology CDS 10400 11289 . - 2 ID=cds-WP_235409944.1;Parent=gene-L2557_RS06580;Dbxref=GenBank:WP_235409944.1;Name=WP_235409944.1;Ontology_term=GO:0015801,GO:0015173,GO:0005886;end_range=11289,.;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=aromatic amino acid transmembrane transporter activity|0015173||IEA;go_process=aromatic amino acid transport|0015801||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004258450.1;locus_tag=L2557_RS06580;partial=true;product=aromatic amino acid transporter;protein_id=WP_235409944.1;transl_table=11 ##sequence-region NZ_JAIKUA010000085.1 1 20458 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000085.1 RefSeq region 1 20458 . + . ID=NZ_JAIKUA010000085.1:1..20458;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000085.1 RefSeq gene 172 993 . - . ID=gene-L2557_RS06585;Name=dapB;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=L2557_RS06585 NZ_JAIKUA010000085.1 Protein Homology CDS 172 993 . - 0 ID=cds-WP_075673713.1;Parent=gene-L2557_RS06585;Dbxref=GenBank:WP_075673713.1;Name=WP_075673713.1;Ontology_term=GO:0009089,GO:0008839;gbkey=CDS;gene=dapB;go_function=4-hydroxy-tetrahydrodipicolinate reductase|0008839||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245202.1;locus_tag=L2557_RS06585;product=4-hydroxy-tetrahydrodipicolinate reductase;protein_id=WP_075673713.1;transl_table=11 NZ_JAIKUA010000085.1 RefSeq gene 1237 2190 . - . ID=gene-L2557_RS06590;Name=ispH;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=L2557_RS06590 NZ_JAIKUA010000085.1 Protein Homology CDS 1237 2190 . - 0 ID=cds-WP_075673712.1;Parent=gene-L2557_RS06590;Dbxref=GenBank:WP_075673712.1;Name=WP_075673712.1;Ontology_term=GO:0019288,GO:0050992,GO:0046872,GO:0051745;gbkey=CDS;gene=ispH;go_function=metal ion binding|0046872||IEA,4-hydroxy-3-methylbut-2-enyl diphosphate reductase activity|0051745||IEA;go_process=isopentenyl diphosphate biosynthetic process%2C methylerythritol 4-phosphate pathway|0019288||IEA,dimethylallyl diphosphate biosynthetic process|0050992||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005166985.1;locus_tag=L2557_RS06590;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=WP_075673712.1;transl_table=11 NZ_JAIKUA010000085.1 RefSeq gene 2171 2641 . - . ID=gene-L2557_RS06595;Name=fkpB;gbkey=Gene;gene=fkpB;gene_biotype=protein_coding;locus_tag=L2557_RS06595 NZ_JAIKUA010000085.1 Protein Homology CDS 2171 2641 . - 0 ID=cds-WP_075673711.1;Parent=gene-L2557_RS06595;Dbxref=GenBank:WP_075673711.1;Name=WP_075673711.1;Ontology_term=GO:0003755;gbkey=CDS;gene=fkpB;go_function=peptidyl-prolyl cis-trans isomerase activity|0003755||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012005151.1;locus_tag=L2557_RS06595;product=FKBP-type peptidyl-prolyl cis-trans isomerase;protein_id=WP_075673711.1;transl_table=11 NZ_JAIKUA010000085.1 RefSeq gene 2711 3226 . - . ID=gene-L2557_RS06600;Name=lspA;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=L2557_RS06600 NZ_JAIKUA010000085.1 Protein Homology CDS 2711 3226 . - 0 ID=cds-WP_075673710.1;Parent=gene-L2557_RS06600;Dbxref=GenBank:WP_075673710.1;Name=WP_075673710.1;Ontology_term=GO:0006508,GO:0009306,GO:0004190,GO:0005886;gbkey=CDS;gene=lspA;go_component=plasma membrane|0005886||IEA;go_function=aspartic-type endopeptidase activity|0004190||IEA;go_process=proteolysis|0006508||IEA,protein secretion|0009306||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248970.1;locus_tag=L2557_RS06600;product=signal peptidase II;protein_id=WP_075673710.1;transl_table=11 NZ_JAIKUA010000085.1 RefSeq gene 3230 6040 . - . ID=gene-L2557_RS06605;Name=ileS;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=L2557_RS06605 NZ_JAIKUA010000085.1 Protein Homology CDS 3230 6040 . - 0 ID=cds-WP_075673709.1;Parent=gene-L2557_RS06605;Dbxref=GenBank:WP_075673709.1;Name=WP_075673709.1;Ontology_term=GO:0006428,GO:0000166,GO:0004822,GO:0005524;gbkey=CDS;gene=ileS;go_function=nucleotide binding|0000166||IEA,isoleucine-tRNA ligase activity|0004822||IEA,ATP binding|0005524||IEA;go_process=isoleucyl-tRNA aminoacylation|0006428||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002210509.1;locus_tag=L2557_RS06605;product=isoleucine--tRNA ligase;protein_id=WP_075673709.1;transl_table=11 NZ_JAIKUA010000085.1 RefSeq gene 6070 7011 . - . ID=gene-L2557_RS06610;Name=ribF;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;locus_tag=L2557_RS06610 NZ_JAIKUA010000085.1 Protein Homology CDS 6070 7011 . - 0 ID=cds-WP_075673708.1;Parent=gene-L2557_RS06610;Dbxref=GenBank:WP_075673708.1;Name=WP_075673708.1;Ontology_term=GO:0003919;gbkey=CDS;gene=ribF;go_function=FMN adenylyltransferase activity|0003919||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245208.1;locus_tag=L2557_RS06610;product=bifunctional riboflavin kinase/FAD synthetase;protein_id=WP_075673708.1;transl_table=11 NZ_JAIKUA010000085.1 RefSeq gene 7442 7702 . + . ID=gene-L2557_RS06615;Name=rpsT;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=L2557_RS06615 NZ_JAIKUA010000085.1 Protein Homology CDS 7442 7702 . + 0 ID=cds-WP_069368645.1;Parent=gene-L2557_RS06615;Dbxref=GenBank:WP_069368645.1;Name=WP_069368645.1;Ontology_term=GO:0006412,GO:0003723,GO:0003735,GO:0005840;gbkey=CDS;gene=rpsT;go_component=ribosome|0005840||IEA;go_function=RNA binding|0003723||IEA,structural constituent of ribosome|0003735||IEA;go_process=translation|0006412||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_014656814.1;locus_tag=L2557_RS06615;product=30S ribosomal protein S20;protein_id=WP_069368645.1;transl_table=11 NZ_JAIKUA010000085.1 RefSeq gene 7775 8695 . - . ID=gene-L2557_RS06620;Name=nhaR;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=L2557_RS06620 NZ_JAIKUA010000085.1 Protein Homology CDS 7775 8695 . - 0 ID=cds-WP_075673707.1;Parent=gene-L2557_RS06620;Dbxref=GenBank:WP_075673707.1;Name=WP_075673707.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=nhaR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010846286.1;locus_tag=L2557_RS06620;product=transcriptional activator NhaR;protein_id=WP_075673707.1;transl_table=11 NZ_JAIKUA010000085.1 RefSeq gene 8886 10064 . - . ID=gene-L2557_RS06625;Name=nhaA;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=L2557_RS06625 NZ_JAIKUA010000085.1 Protein Homology CDS 8886 10064 . - 0 ID=cds-WP_099659990.1;Parent=gene-L2557_RS06625;Dbxref=GenBank:WP_099659990.1;Name=WP_099659990.1;Ontology_term=GO:0006814,GO:0006885,GO:0015385,GO:0016020;gbkey=CDS;gene=nhaA;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535229.1;locus_tag=L2557_RS06625;product=Na+/H+ antiporter NhaA;protein_id=WP_099659990.1;transl_table=11 NZ_JAIKUA010000085.1 RefSeq gene 10505 11350 . + . ID=gene-L2557_RS06630;Name=L2557_RS06630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06630 NZ_JAIKUA010000085.1 Protein Homology CDS 10505 11350 . + 0 ID=cds-WP_235409945.1;Parent=gene-L2557_RS06630;Dbxref=GenBank:WP_235409945.1;Name=WP_235409945.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010846284.1;locus_tag=L2557_RS06630;product=DMT family transporter;protein_id=WP_235409945.1;transl_table=11 NZ_JAIKUA010000085.1 RefSeq gene 11427 12566 . - . ID=gene-L2557_RS06635;Name=dnaJ;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=L2557_RS06635 NZ_JAIKUA010000085.1 Protein Homology CDS 11427 12566 . - 0 ID=cds-WP_235409946.1;Parent=gene-L2557_RS06635;Dbxref=GenBank:WP_235409946.1;Name=WP_235409946.1;Ontology_term=GO:0006457,GO:0009408,GO:0005515,GO:0005524;gbkey=CDS;gene=dnaJ;go_function=protein binding|0005515||IEA,ATP binding|0005524||IEA;go_process=protein folding|0006457||IEA,response to heat|0009408||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245212.1;locus_tag=L2557_RS06635;product=molecular chaperone DnaJ;protein_id=WP_235409946.1;transl_table=11 NZ_JAIKUA010000085.1 RefSeq gene 12672 14597 . - . ID=gene-L2557_RS06640;Name=dnaK;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=L2557_RS06640 NZ_JAIKUA010000085.1 Protein Homology CDS 12672 14597 . - 0 ID=cds-WP_099659992.1;Parent=gene-L2557_RS06640;Dbxref=GenBank:WP_099659992.1;Name=WP_099659992.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887;gbkey=CDS;gene=dnaK;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001737966.1;locus_tag=L2557_RS06640;product=molecular chaperone DnaK;protein_id=WP_099659992.1;transl_table=11 NZ_JAIKUA010000085.1 RefSeq gene 15088 15669 . - . ID=gene-L2557_RS06645;Name=mog;gbkey=Gene;gene=mog;gene_biotype=protein_coding;locus_tag=L2557_RS06645 NZ_JAIKUA010000085.1 Protein Homology CDS 15088 15669 . - 0 ID=cds-WP_164530317.1;Parent=gene-L2557_RS06645;Dbxref=GenBank:WP_164530317.1;Name=WP_164530317.1;Ontology_term=GO:0006777;gbkey=CDS;gene=mog;go_process=Mo-molybdopterin cofactor biosynthetic process|0006777||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245215.1;locus_tag=L2557_RS06645;product=molybdopterin adenylyltransferase;protein_id=WP_164530317.1;transl_table=11 NZ_JAIKUA010000085.1 RefSeq gene 15894 16877 . - . ID=gene-L2557_RS06650;Name=L2557_RS06650;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06650 NZ_JAIKUA010000085.1 Protein Homology CDS 15894 16877 . - 0 ID=cds-WP_099659994.1;Parent=gene-L2557_RS06650;Dbxref=GenBank:WP_099659994.1;Name=WP_099659994.1;Ontology_term=GO:0005515;gbkey=CDS;go_function=protein binding|0005515||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628242.1;locus_tag=L2557_RS06650;product=tetratricopeptide repeat protein;protein_id=WP_099659994.1;transl_table=11 NZ_JAIKUA010000085.1 RefSeq gene 17061 18014 . - . ID=gene-L2557_RS06655;Name=tal;gbkey=Gene;gene=tal;gene_biotype=protein_coding;locus_tag=L2557_RS06655 NZ_JAIKUA010000085.1 Protein Homology CDS 17061 18014 . - 0 ID=cds-WP_075674224.1;Parent=gene-L2557_RS06655;Dbxref=GenBank:WP_075674224.1;Name=WP_075674224.1;Ontology_term=GO:0006098,GO:0004801,GO:0005737;gbkey=CDS;gene=tal;go_component=cytoplasm|0005737||IEA;go_function=transaldolase activity|0004801||IEA;go_process=pentose-phosphate shunt|0006098||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017457867.1;locus_tag=L2557_RS06655;product=transaldolase;protein_id=WP_075674224.1;transl_table=11 NZ_JAIKUA010000085.1 RefSeq gene 18319 19101 . + . ID=gene-L2557_RS06660;Name=yaaA;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=L2557_RS06660 NZ_JAIKUA010000085.1 Protein Homology CDS 18319 19101 . + 0 ID=cds-WP_075674223.1;Parent=gene-L2557_RS06660;Dbxref=GenBank:WP_075674223.1;Name=WP_075674223.1;gbkey=CDS;gene=yaaA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248959.1;locus_tag=L2557_RS06660;product=peroxide stress protein YaaA;protein_id=WP_075674223.1;transl_table=11 NZ_JAIKUA010000085.1 RefSeq gene 19165 20458 . - . ID=gene-L2557_RS06665;Name=L2557_RS06665;end_range=20458,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06665;partial=true NZ_JAIKUA010000085.1 Protein Homology CDS 19165 20458 . - 1 ID=cds-WP_235409947.1;Parent=gene-L2557_RS06665;Dbxref=GenBank:WP_235409947.1;Name=WP_235409947.1;Ontology_term=GO:0005509;end_range=20458,.;gbkey=CDS;go_function=calcium ion binding|0005509||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367435.1;locus_tag=L2557_RS06665;partial=true;product=calcium-binding protein;protein_id=WP_235409947.1;transl_table=11 ##sequence-region NZ_JAIKUA010000086.1 1 570 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000086.1 RefSeq region 1 570 . + . ID=NZ_JAIKUA010000086.1:1..570;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000086.1 RefSeq gene 83 570 . - . ID=gene-L2557_RS06670;Name=L2557_RS06670;end_range=570,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06670;partial=true NZ_JAIKUA010000086.1 GeneMarkS-2+ CDS 83 570 . - 2 ID=cds-WP_235409948.1;Parent=gene-L2557_RS06670;Dbxref=GenBank:WP_235409948.1;Name=WP_235409948.1;end_range=570,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS06670;partial=true;product=hypothetical protein;protein_id=WP_235409948.1;transl_table=11 ##sequence-region NZ_JAIKUA010000087.1 1 20222 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000087.1 RefSeq region 1 20222 . + . ID=NZ_JAIKUA010000087.1:1..20222;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000087.1 RefSeq gene 64 1485 . - . ID=gene-L2557_RS06675;Name=ftsP;gbkey=Gene;gene=ftsP;gene_biotype=protein_coding;locus_tag=L2557_RS06675 NZ_JAIKUA010000087.1 Protein Homology CDS 64 1485 . - 0 ID=cds-WP_099660209.1;Parent=gene-L2557_RS06675;Dbxref=GenBank:WP_099660209.1;Name=WP_099660209.1;Ontology_term=GO:0043093,GO:0016491;gbkey=CDS;gene=ftsP;go_function=oxidoreductase activity|0016491||IEA;go_process=FtsZ-dependent cytokinesis|0043093||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249479.1;locus_tag=L2557_RS06675;product=cell division protein FtsP;protein_id=WP_099660209.1;transl_table=11 NZ_JAIKUA010000087.1 RefSeq gene 1724 2473 . - . ID=gene-L2557_RS06680;Name=L2557_RS06680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06680 NZ_JAIKUA010000087.1 Protein Homology CDS 1724 2473 . - 0 ID=cds-WP_075672915.1;Parent=gene-L2557_RS06680;Dbxref=GenBank:WP_075672915.1;Name=WP_075672915.1;Ontology_term=GO:0008654,GO:0003841,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=1-acylglycerol-3-phosphate O-acyltransferase activity|0003841||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249478.1;locus_tag=L2557_RS06680;product=1-acylglycerol-3-phosphate O-acyltransferase;protein_id=WP_075672915.1;transl_table=11 NZ_JAIKUA010000087.1 RefSeq gene 2538 3263 . - . ID=gene-L2557_RS17965;Name=L2557_RS17965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17965 NZ_JAIKUA010000087.1 Protein Homology CDS 2538 3263 . - 0 ID=cds-WP_373274652.1;Parent=gene-L2557_RS17965;Dbxref=GenBank:WP_373274652.1;Name=WP_373274652.1;Ontology_term=GO:0006265,GO:0003677,GO:0003916,GO:0005524;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA topoisomerase activity|0003916||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: protein motif:HMM:NF015922.6;locus_tag=L2557_RS17965;product=DNA gyrase C-terminal beta-propeller domain-containing protein;protein_id=WP_373274652.1;transl_table=11 NZ_JAIKUA010000087.1 RefSeq pseudogene 3315 5495 . - . ID=gene-L2557_RS06690;Name=parC;gbkey=Gene;gene=parC;gene_biotype=pseudogene;locus_tag=L2557_RS06690;partial=true;pseudo=true;start_range=.,3315 NZ_JAIKUA010000087.1 Protein Homology CDS 3315 5495 . - 0 ID=cds-L2557_RS06690;Parent=gene-L2557_RS06690;Note=incomplete%3B partial in the middle of a contig%3B missing C-terminus;Ontology_term=GO:0006265,GO:0003918,GO:0009340;gbkey=CDS;gene=parC;go_component=DNA topoisomerase IV complex|0009340||IEA;go_function=DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010847819.1;locus_tag=L2557_RS06690;partial=true;product=DNA topoisomerase IV subunit A;pseudo=true;start_range=.,3315;transl_table=11 NZ_JAIKUA010000087.1 RefSeq gene 5528 7423 . - . ID=gene-L2557_RS06695;Name=parE;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=L2557_RS06695 NZ_JAIKUA010000087.1 Protein Homology CDS 5528 7423 . - 0 ID=cds-WP_159241791.1;Parent=gene-L2557_RS06695;Dbxref=GenBank:WP_159241791.1;Name=WP_159241791.1;Ontology_term=GO:0006265,GO:0003677,GO:0003918,GO:0005524,GO:0005694;gbkey=CDS;gene=parE;go_component=chromosome|0005694||IEA;go_function=DNA binding|0003677||IEA,DNA topoisomerase type II (double strand cut%2C ATP-hydrolyzing) activity|0003918||IEA,ATP binding|0005524||IEA;go_process=DNA topological change|0006265||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005228871.1;locus_tag=L2557_RS06695;product=DNA topoisomerase IV subunit B;protein_id=WP_159241791.1;transl_table=11 NZ_JAIKUA010000087.1 RefSeq gene 7548 8123 . - . ID=gene-L2557_RS06700;Name=yqiA;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=L2557_RS06700 NZ_JAIKUA010000087.1 Protein Homology CDS 7548 8123 . - 0 ID=cds-WP_099660212.1;Parent=gene-L2557_RS06700;Dbxref=GenBank:WP_099660212.1;Name=WP_099660212.1;gbkey=CDS;gene=yqiA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535999.1;locus_tag=L2557_RS06700;product=esterase YqiA;protein_id=WP_099660212.1;transl_table=11 NZ_JAIKUA010000087.1 RefSeq gene 8127 8966 . - . ID=gene-L2557_RS06705;Name=cpdA;gbkey=Gene;gene=cpdA;gene_biotype=protein_coding;locus_tag=L2557_RS06705 NZ_JAIKUA010000087.1 Protein Homology CDS 8127 8966 . - 0 ID=cds-WP_075672911.1;Parent=gene-L2557_RS06705;Dbxref=GenBank:WP_075672911.1;Name=WP_075672911.1;Ontology_term=GO:0004115;gbkey=CDS;gene=cpdA;go_function=3'%2C5'-cyclic-AMP phosphodiesterase activity|0004115||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250217.1;locus_tag=L2557_RS06705;product=3'%2C5'-cyclic-AMP phosphodiesterase;protein_id=WP_075672911.1;transl_table=11 NZ_JAIKUA010000087.1 RefSeq gene 9193 9828 . - . ID=gene-L2557_RS06710;Name=nudF;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=L2557_RS06710 NZ_JAIKUA010000087.1 Protein Homology CDS 9193 9828 . - 0 ID=cds-WP_075672910.1;Parent=gene-L2557_RS06710;Dbxref=GenBank:WP_075672910.1;Name=WP_075672910.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;gene=nudF;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006811981.1;locus_tag=L2557_RS06710;product=ADP-ribose diphosphatase;protein_id=WP_075672910.1;transl_table=11 NZ_JAIKUA010000087.1 RefSeq gene 10043 11440 . + . ID=gene-L2557_RS06715;Name=tolC;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=L2557_RS06715 NZ_JAIKUA010000087.1 Protein Homology CDS 10043 11440 . + 0 ID=cds-WP_099660213.1;Parent=gene-L2557_RS06715;Dbxref=GenBank:WP_099660213.1;Name=WP_099660213.1;Ontology_term=GO:0055085,GO:0015562;gbkey=CDS;gene=tolC;go_function=efflux transmembrane transporter activity|0015562||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245559.1;locus_tag=L2557_RS06715;product=outer membrane channel protein TolC;protein_id=WP_099660213.1;transl_table=11 NZ_JAIKUA010000087.1 RefSeq gene 11770 12498 . + . ID=gene-L2557_RS06720;Name=L2557_RS06720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06720 NZ_JAIKUA010000087.1 Protein Homology CDS 11770 12498 . + 0 ID=cds-WP_075672908.1;Parent=gene-L2557_RS06720;Dbxref=GenBank:WP_075672908.1;Name=WP_075672908.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249472.1;locus_tag=L2557_RS06720;product=DUF1190 family protein;protein_id=WP_075672908.1;transl_table=11 NZ_JAIKUA010000087.1 RefSeq gene 12507 13670 . + . ID=gene-L2557_RS06725;Name=L2557_RS06725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06725 NZ_JAIKUA010000087.1 Protein Homology CDS 12507 13670 . + 0 ID=cds-WP_075672907.1;Parent=gene-L2557_RS06725;Dbxref=GenBank:WP_075672907.1;Name=WP_075672907.1;Ontology_term=GO:0005524,GO:0016874,GO:0046872;gbkey=CDS;go_function=ATP binding|0005524||IEA,ligase activity|0016874||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368326.1;locus_tag=L2557_RS06725;product=glutathionylspermidine synthase family protein;protein_id=WP_075672907.1;transl_table=11 NZ_JAIKUA010000087.1 RefSeq gene 13826 14611 . - . ID=gene-L2557_RS06730;Name=ygiD;gbkey=Gene;gene=ygiD;gene_biotype=protein_coding;locus_tag=L2557_RS06730 NZ_JAIKUA010000087.1 Protein Homology CDS 13826 14611 . - 0 ID=cds-WP_099660214.1;Parent=gene-L2557_RS06730;Dbxref=GenBank:WP_099660214.1;Name=WP_099660214.1;gbkey=CDS;gene=ygiD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245563.1;locus_tag=L2557_RS06730;product=4%2C5-DOPA-extradiol-dioxygenase;protein_id=WP_099660214.1;transl_table=11 NZ_JAIKUA010000087.1 RefSeq gene 14786 15439 . - . ID=gene-L2557_RS06735;Name=ribB;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=L2557_RS06735 NZ_JAIKUA010000087.1 Protein Homology CDS 14786 15439 . - 0 ID=cds-WP_072070063.1;Parent=gene-L2557_RS06735;Dbxref=GenBank:WP_072070063.1;Name=WP_072070063.1;Ontology_term=GO:0008686;gbkey=CDS;gene=ribB;go_function=3%2C4-dihydroxy-2-butanone-4-phosphate synthase activity|0008686||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245565.1;locus_tag=L2557_RS06735;product=3%2C4-dihydroxy-2-butanone-4-phosphate synthase;protein_id=WP_072070063.1;transl_table=11 NZ_JAIKUA010000087.1 cmsearch riboswitch 15564 15723 . - . ID=id-NZ_JAIKUA010000087.1:15564..15723;Dbxref=RFAM:RF00050;Note=FMN riboswitch;bound_moiety=flavin mononucleotide;gbkey=regulatory;inference=COORDINATES: profile:INFERNAL:1.1.5;regulatory_class=riboswitch NZ_JAIKUA010000087.1 RefSeq gene 15925 16245 . + . ID=gene-L2557_RS06740;Name=ubiK;gbkey=Gene;gene=ubiK;gene_biotype=protein_coding;gene_synonym=yqiC;locus_tag=L2557_RS06740 NZ_JAIKUA010000087.1 Protein Homology CDS 15925 16245 . + 0 ID=cds-WP_075672905.1;Parent=gene-L2557_RS06740;Dbxref=GenBank:WP_075672905.1;Name=WP_075672905.1;Ontology_term=GO:0006744,GO:0042802;gbkey=CDS;gene=ubiK;go_function=identical protein binding|0042802||IEA;go_process=ubiquinone biosynthetic process|0006744||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249470.1;locus_tag=L2557_RS06740;product=ubiquinone biosynthesis accessory factor UbiK;protein_id=WP_075672905.1;transl_table=11 NZ_JAIKUA010000087.1 RefSeq gene 16345 17667 . - . ID=gene-L2557_RS06745;Name=L2557_RS06745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06745 NZ_JAIKUA010000087.1 Protein Homology CDS 16345 17667 . - 0 ID=cds-WP_075672904.1;Parent=gene-L2557_RS06745;Dbxref=GenBank:WP_075672904.1;Name=WP_075672904.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_312649.2;locus_tag=L2557_RS06745;product=6-phospho-alpha-glucosidase;protein_id=WP_075672904.1;transl_table=11 NZ_JAIKUA010000087.1 RefSeq gene 17667 19295 . - . ID=gene-L2557_RS06750;Name=L2557_RS06750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06750 NZ_JAIKUA010000087.1 Protein Homology CDS 17667 19295 . - 0 ID=cds-WP_075672903.1;Parent=gene-L2557_RS06750;Dbxref=GenBank:WP_075672903.1;Name=WP_075672903.1;Ontology_term=GO:0009401,GO:0015144;gbkey=CDS;go_function=carbohydrate transmembrane transporter activity|0015144||IEA;go_process=phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_000952149.1;locus_tag=L2557_RS06750;product=alpha-glucoside-specific PTS transporter subunit IIBC;protein_id=WP_075672903.1;transl_table=11 NZ_JAIKUA010000087.1 RefSeq gene 19597 20222 . + . ID=gene-L2557_RS17945;Name=L2557_RS17945;end_range=20222,.;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS17945;partial=true NZ_JAIKUA010000087.1 Protein Homology CDS 19597 20222 . + 0 ID=cds-WP_235409949.1;Parent=gene-L2557_RS17945;Dbxref=GenBank:WP_235409949.1;Name=WP_235409949.1;Ontology_term=GO:0003677,GO:0003700;end_range=20222,.;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008460670.1;locus_tag=L2557_RS17945;partial=true;product=GntR family transcriptional regulator;protein_id=WP_235409949.1;transl_table=11 ##sequence-region NZ_JAIKUA010000088.1 1 252 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000088.1 RefSeq region 1 252 . + . ID=NZ_JAIKUA010000088.1:1..252;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 ##sequence-region NZ_JAIKUA010000089.1 1 22540 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000089.1 RefSeq region 1 22540 . + . ID=NZ_JAIKUA010000089.1:1..22540;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000089.1 RefSeq gene 139 1614 . + . ID=gene-L2557_RS06760;Name=L2557_RS06760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06760 NZ_JAIKUA010000089.1 Protein Homology CDS 139 1614 . + 0 ID=cds-WP_235409950.1;Parent=gene-L2557_RS06760;Dbxref=GenBank:WP_235409950.1;Name=WP_235409950.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368273.1;locus_tag=L2557_RS06760;product=YadA C-terminal domain-containing protein;protein_id=WP_235409950.1;transl_table=11 NZ_JAIKUA010000089.1 RefSeq gene 1724 2533 . + . ID=gene-L2557_RS06765;Name=L2557_RS06765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06765 NZ_JAIKUA010000089.1 Protein Homology CDS 1724 2533 . + 0 ID=cds-WP_099660089.1;Parent=gene-L2557_RS06765;Dbxref=GenBank:WP_099660089.1;Name=WP_099660089.1;Ontology_term=GO:0008233;gbkey=CDS;go_function=peptidase activity|0008233||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250291.1;locus_tag=L2557_RS06765;product=TraB/GumN family protein;protein_id=WP_099660089.1;transl_table=11 NZ_JAIKUA010000089.1 RefSeq gene 2568 3047 . + . ID=gene-L2557_RS06770;Name=ybaK;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=L2557_RS06770 NZ_JAIKUA010000089.1 Protein Homology CDS 2568 3047 . + 0 ID=cds-WP_075673315.1;Parent=gene-L2557_RS06770;Dbxref=GenBank:WP_075673315.1;Name=WP_075673315.1;Ontology_term=GO:0002161;gbkey=CDS;gene=ybaK;go_function=aminoacyl-tRNA deacylase activity|0002161||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013576591.1;locus_tag=L2557_RS06770;product=Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK;protein_id=WP_075673315.1;transl_table=11 NZ_JAIKUA010000089.1 RefSeq gene 3167 4831 . - . ID=gene-L2557_RS06775;Name=ushA;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=L2557_RS06775 NZ_JAIKUA010000089.1 Protein Homology CDS 3167 4831 . - 0 ID=cds-WP_075673314.1;Parent=gene-L2557_RS06775;Dbxref=GenBank:WP_075673314.1;Name=WP_075673314.1;Ontology_term=GO:0009166,GO:0000166,GO:0016787,GO:0046872;gbkey=CDS;gene=ushA;go_function=nucleotide binding|0000166||IEA,hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;go_process=nucleotide catabolic process|0009166||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244272.1;locus_tag=L2557_RS06775;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA;protein_id=WP_075673314.1;transl_table=11 NZ_JAIKUA010000089.1 RefSeq gene 5093 6331 . + . ID=gene-L2557_RS06780;Name=L2557_RS06780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06780 NZ_JAIKUA010000089.1 Protein Homology CDS 5093 6331 . + 0 ID=cds-WP_196728371.1;Parent=gene-L2557_RS06780;Dbxref=GenBank:WP_196728371.1;Name=WP_196728371.1;Ontology_term=GO:0055085,GO:0022857;gbkey=CDS;go_function=transmembrane transporter activity|0022857||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004260347.1;locus_tag=L2557_RS06780;product=MFS transporter;protein_id=WP_196728371.1;transl_table=11 NZ_JAIKUA010000089.1 RefSeq gene 6570 8330 . + . ID=gene-L2557_RS06785;Name=ybaL;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=L2557_RS06785 NZ_JAIKUA010000089.1 Protein Homology CDS 6570 8330 . + 0 ID=cds-WP_075673312.1;Parent=gene-L2557_RS06785;Dbxref=GenBank:WP_075673312.1;Name=WP_075673312.1;Ontology_term=GO:0006813,GO:0008324,GO:0051139,GO:0016020;gbkey=CDS;gene=ybaL;go_component=membrane|0016020||IEA;go_function=monoatomic cation transmembrane transporter activity|0008324||IEA,metal cation:proton antiporter activity|0051139||IEA;go_process=potassium ion transport|0006813||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827522.1;locus_tag=L2557_RS06785;product=YbaL family putative K(+) efflux transporter;protein_id=WP_075673312.1;transl_table=11 NZ_JAIKUA010000089.1 RefSeq gene 8448 9758 . - . ID=gene-L2557_RS06790;Name=L2557_RS06790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06790 NZ_JAIKUA010000089.1 Protein Homology CDS 8448 9758 . - 0 ID=cds-WP_075673311.1;Parent=gene-L2557_RS06790;Dbxref=GenBank:WP_075673311.1;Name=WP_075673311.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:NP_308557.1;locus_tag=L2557_RS06790;product=inosine/guanosine kinase;protein_id=WP_075673311.1;transl_table=11 NZ_JAIKUA010000089.1 RefSeq gene 9862 10980 . - . ID=gene-L2557_RS06795;Name=wzz(fepE);gbkey=Gene;gene=wzz(fepE);gene_biotype=protein_coding;locus_tag=L2557_RS06795 NZ_JAIKUA010000089.1 Protein Homology CDS 9862 10980 . - 0 ID=cds-WP_159242308.1;Parent=gene-L2557_RS06795;Dbxref=GenBank:WP_159242308.1;Name=WP_159242308.1;Ontology_term=GO:0009103,GO:0016020;gbkey=CDS;gene=wzz(fepE);go_component=membrane|0016020||IEA;go_process=lipopolysaccharide biosynthetic process|0009103||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248652.1;locus_tag=L2557_RS06795;product=LPS O-antigen length regulator Wzz(fepE);protein_id=WP_159242308.1;transl_table=11 NZ_JAIKUA010000089.1 RefSeq gene 11144 12124 . - . ID=gene-L2557_RS06800;Name=hemH;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=L2557_RS06800 NZ_JAIKUA010000089.1 Protein Homology CDS 11144 12124 . - 0 ID=cds-WP_196563835.1;Parent=gene-L2557_RS06800;Dbxref=GenBank:WP_196563835.1;Name=WP_196563835.1;Ontology_term=GO:0006779,GO:0004325;gbkey=CDS;gene=hemH;go_function=ferrochelatase activity|0004325||IEA;go_process=porphyrin-containing compound biosynthetic process|0006779||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248653.1;locus_tag=L2557_RS06800;product=ferrochelatase;protein_id=WP_196563835.1;transl_table=11 NZ_JAIKUA010000089.1 RefSeq gene 12288 12932 . - . ID=gene-L2557_RS06805;Name=adk;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=L2557_RS06805 NZ_JAIKUA010000089.1 Protein Homology CDS 12288 12932 . - 0 ID=cds-WP_075673308.1;Parent=gene-L2557_RS06805;Dbxref=GenBank:WP_075673308.1;Name=WP_075673308.1;Ontology_term=GO:0006139,GO:0004017,GO:0005524;gbkey=CDS;gene=adk;go_function=AMP kinase activity|0004017||IEA,ATP binding|0005524||IEA;go_process=nucleobase-containing compound metabolic process|0006139||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_706367.2;locus_tag=L2557_RS06805;product=adenylate kinase;protein_id=WP_075673308.1;transl_table=11 NZ_JAIKUA010000089.1 RefSeq gene 13114 14997 . - . ID=gene-L2557_RS06810;Name=htpG;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=L2557_RS06810 NZ_JAIKUA010000089.1 Protein Homology CDS 13114 14997 . - 0 ID=cds-WP_099660085.1;Parent=gene-L2557_RS06810;Dbxref=GenBank:WP_099660085.1;Name=WP_099660085.1;Ontology_term=GO:0006457,GO:0005524,GO:0016887,GO:0051082;gbkey=CDS;gene=htpG;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,unfolded protein binding|0051082||IEA;go_process=protein folding|0006457||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248654.1;locus_tag=L2557_RS06810;product=molecular chaperone HtpG;protein_id=WP_099660085.1;transl_table=11 NZ_JAIKUA010000089.1 RefSeq gene 15232 16419 . - . ID=gene-L2557_RS06815;Name=purT;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=L2557_RS06815 NZ_JAIKUA010000089.1 Protein Homology CDS 15232 16419 . - 0 ID=cds-WP_075673306.1;Parent=gene-L2557_RS06815;Dbxref=GenBank:WP_075673306.1;Name=WP_075673306.1;Ontology_term=GO:0009152,GO:0000287,GO:0004644,GO:0005524;gbkey=CDS;gene=purT;go_function=magnesium ion binding|0000287||IEA,phosphoribosylglycinamide formyltransferase activity|0004644||IEA,ATP binding|0005524||IEA;go_process=purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250286.1;locus_tag=L2557_RS06815;product=formate-dependent phosphoribosylglycinamide formyltransferase;protein_id=WP_075673306.1;transl_table=11 NZ_JAIKUA010000089.1 RefSeq gene 16544 17455 . - . ID=gene-L2557_RS06820;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=L2557_RS06820 NZ_JAIKUA010000089.1 Protein Homology CDS 16544 17455 . - 0 ID=cds-WP_075673305.1;Parent=gene-L2557_RS06820;Dbxref=GenBank:WP_075673305.1;Name=WP_075673305.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827520.1;locus_tag=L2557_RS06820;product=EamA family transporter RarD;protein_id=WP_075673305.1;transl_table=11 NZ_JAIKUA010000089.1 RefSeq gene 17688 18635 . - . ID=gene-L2557_RS06825;Name=L2557_RS06825;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06825 NZ_JAIKUA010000089.1 Protein Homology CDS 17688 18635 . - 0 ID=cds-WP_075673304.1;Parent=gene-L2557_RS06825;Dbxref=GenBank:WP_075673304.1;Name=WP_075673304.1;Ontology_term=GO:0016301;gbkey=CDS;go_function=kinase activity|0016301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244286.1;locus_tag=L2557_RS06825;product=aminoimidazole riboside kinase;protein_id=WP_075673304.1;transl_table=11 NZ_JAIKUA010000089.1 RefSeq gene 18909 20375 . + . ID=gene-L2557_RS06830;Name=L2557_RS06830;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06830 NZ_JAIKUA010000089.1 Protein Homology CDS 18909 20375 . + 0 ID=cds-WP_099660083.1;Parent=gene-L2557_RS06830;Dbxref=GenBank:WP_099660083.1;Name=WP_099660083.1;Ontology_term=GO:0005975,GO:0004553;gbkey=CDS;go_function=hydrolase activity%2C hydrolyzing O-glycosyl compounds|0004553||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006534038.1;locus_tag=L2557_RS06830;product=glycoside hydrolase family 32 protein;protein_id=WP_099660083.1;transl_table=11 NZ_JAIKUA010000089.1 RefSeq gene 20405 21400 . - . ID=gene-L2557_RS06835;Name=L2557_RS06835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06835 NZ_JAIKUA010000089.1 Protein Homology CDS 20405 21400 . - 0 ID=cds-WP_075673302.1;Parent=gene-L2557_RS06835;Dbxref=GenBank:WP_075673302.1;Name=WP_075673302.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368279.1;locus_tag=L2557_RS06835;product=LacI family DNA-binding transcriptional regulator;protein_id=WP_075673302.1;transl_table=11 NZ_JAIKUA010000089.1 RefSeq gene 21869 22504 . + . ID=gene-L2557_RS06840;Name=L2557_RS06840;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06840 NZ_JAIKUA010000089.1 Protein Homology CDS 21869 22504 . + 0 ID=cds-WP_075673301.1;Parent=gene-L2557_RS06840;Dbxref=GenBank:WP_075673301.1;Name=WP_075673301.1;Ontology_term=GO:0000160,GO:0006355,GO:0000156,GO:0003677;gbkey=CDS;go_function=phosphorelay response regulator activity|0000156||IEA,DNA binding|0003677||IEA;go_process=phosphorelay signal transduction system|0000160||IEA,regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244289.1;locus_tag=L2557_RS06840;product=response regulator transcription factor;protein_id=WP_075673301.1;transl_table=11 ##sequence-region NZ_JAIKUA010000009.1 1 18512 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000009.1 RefSeq region 1 18512 . + . ID=NZ_JAIKUA010000009.1:1..18512;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000009.1 RefSeq gene 185 766 . - . ID=gene-L2557_RS00665;Name=L2557_RS00665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00665 NZ_JAIKUA010000009.1 Protein Homology CDS 185 766 . - 0 ID=cds-WP_075673679.1;Parent=gene-L2557_RS00665;Dbxref=GenBank:WP_075673679.1;Name=WP_075673679.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533859.1;locus_tag=L2557_RS00665;product=DJ-1/PfpI family protein;protein_id=WP_075673679.1;transl_table=11 NZ_JAIKUA010000009.1 RefSeq gene 772 1413 . - . ID=gene-L2557_RS00670;Name=L2557_RS00670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00670 NZ_JAIKUA010000009.1 Protein Homology CDS 772 1413 . - 0 ID=cds-WP_075673680.1;Parent=gene-L2557_RS00670;Dbxref=GenBank:WP_075673680.1;Name=WP_075673680.1;Ontology_term=GO:0016829,GO:0016830,GO:0016832,GO:0016833;gbkey=CDS;go_function=lyase activity|0016829||IEA,carbon-carbon lyase activity|0016830||IEA,aldehyde-lyase activity|0016832||IEA,oxo-acid-lyase activity|0016833||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533858.1;locus_tag=L2557_RS00670;product=bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase;protein_id=WP_075673680.1;transl_table=11 NZ_JAIKUA010000009.1 RefSeq gene 1394 2365 . - . ID=gene-L2557_RS00675;Name=L2557_RS00675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00675 NZ_JAIKUA010000009.1 Protein Homology CDS 1394 2365 . - 0 ID=cds-WP_075673681.1;Parent=gene-L2557_RS00675;Dbxref=GenBank:WP_075673681.1;Name=WP_075673681.1;Ontology_term=GO:0005975,GO:0019200,GO:0005829;gbkey=CDS;go_component=cytosol|0005829||IEA;go_function=carbohydrate kinase activity|0019200||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248619.1;locus_tag=L2557_RS00675;product=sugar kinase;protein_id=WP_075673681.1;transl_table=11 NZ_JAIKUA010000009.1 RefSeq gene 2362 3216 . - . ID=gene-L2557_RS00680;Name=L2557_RS00680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00680 NZ_JAIKUA010000009.1 Protein Homology CDS 2362 3216 . - 0 ID=cds-WP_075673682.1;Parent=gene-L2557_RS00680;Dbxref=GenBank:WP_075673682.1;Name=WP_075673682.1;Ontology_term=GO:0005975,GO:0008270,GO:0009025;gbkey=CDS;go_function=zinc ion binding|0008270||IEA,tagatose-bisphosphate aldolase activity|0009025||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248618.1;locus_tag=L2557_RS00680;product=tagatose bisphosphate family class II aldolase;protein_id=WP_075673682.1;transl_table=11 NZ_JAIKUA010000009.1 RefSeq gene 3331 4806 . - . ID=gene-L2557_RS00685;Name=L2557_RS00685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00685 NZ_JAIKUA010000009.1 Protein Homology CDS 3331 4806 . - 0 ID=cds-WP_235409735.1;Parent=gene-L2557_RS00685;Dbxref=GenBank:WP_235409735.1;Name=WP_235409735.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012303733.1;locus_tag=L2557_RS00685;product=DUF2264 domain-containing protein;protein_id=WP_235409735.1;transl_table=11 NZ_JAIKUA010000009.1 RefSeq gene 4861 6471 . - . ID=gene-L2557_RS00690;Name=L2557_RS00690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00690 NZ_JAIKUA010000009.1 Protein Homology CDS 4861 6471 . - 0 ID=cds-WP_099659283.1;Parent=gene-L2557_RS00690;Dbxref=GenBank:WP_099659283.1;Name=WP_099659283.1;Ontology_term=GO:0008484,GO:0046872;gbkey=CDS;go_function=sulfuric ester hydrolase activity|0008484||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011192900.1;locus_tag=L2557_RS00690;product=sulfatase family protein;protein_id=WP_099659283.1;transl_table=11 NZ_JAIKUA010000009.1 RefSeq gene 6510 7745 . - . ID=gene-L2557_RS00695;Name=L2557_RS00695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00695 NZ_JAIKUA010000009.1 Protein Homology CDS 6510 7745 . - 0 ID=cds-WP_223673985.1;Parent=gene-L2557_RS00695;Dbxref=GenBank:WP_223673985.1;Name=WP_223673985.1;Ontology_term=GO:0018209,GO:0046500,GO:0016491,GO:0051539;gbkey=CDS;go_function=oxidoreductase activity|0016491||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;go_process=peptidyl-serine modification|0018209||IEA,S-adenosylmethionine metabolic process|0046500||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017627906.1;locus_tag=L2557_RS00695;product=anaerobic sulfatase maturase;protein_id=WP_223673985.1;transl_table=11 NZ_JAIKUA010000009.1 RefSeq gene 8280 9059 . + . ID=gene-L2557_RS00700;Name=agaR;gbkey=Gene;gene=agaR;gene_biotype=protein_coding;locus_tag=L2557_RS00700 NZ_JAIKUA010000009.1 Protein Homology CDS 8280 9059 . + 0 ID=cds-WP_075673686.1;Parent=gene-L2557_RS00700;Dbxref=GenBank:WP_075673686.1;Name=WP_075673686.1;gbkey=CDS;gene=agaR;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244214.1;locus_tag=L2557_RS00700;product=transcriptional repressor AgaR;protein_id=WP_075673686.1;transl_table=11 NZ_JAIKUA010000009.1 RefSeq gene 9113 10393 . + . ID=gene-L2557_RS00705;Name=kbaZ;gbkey=Gene;gene=kbaZ;gene_biotype=protein_coding;locus_tag=L2557_RS00705 NZ_JAIKUA010000009.1 Protein Homology CDS 9113 10393 . + 0 ID=cds-WP_075673687.1;Parent=gene-L2557_RS00705;Dbxref=GenBank:WP_075673687.1;Name=WP_075673687.1;gbkey=CDS;gene=kbaZ;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248615.1;locus_tag=L2557_RS00705;product=tagatose-bisphosphate aldolase subunit KbaZ;protein_id=WP_075673687.1;transl_table=11 NZ_JAIKUA010000009.1 RefSeq gene 10405 11595 . + . ID=gene-L2557_RS00710;Name=L2557_RS00710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00710 NZ_JAIKUA010000009.1 Protein Homology CDS 10405 11595 . + 0 ID=cds-WP_075673688.1;Parent=gene-L2557_RS00710;Dbxref=GenBank:WP_075673688.1;Name=WP_075673688.1;Ontology_term=GO:1901135,GO:0097367;gbkey=CDS;go_function=carbohydrate derivative binding|0097367||IEA;go_process=carbohydrate derivative metabolic process|1901135||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244212.1;locus_tag=L2557_RS00710;product=SIS domain-containing protein;protein_id=WP_075673688.1;transl_table=11 NZ_JAIKUA010000009.1 RefSeq gene 11620 12114 . + . ID=gene-L2557_RS00715;Name=agaV;gbkey=Gene;gene=agaV;gene_biotype=protein_coding;locus_tag=L2557_RS00715 NZ_JAIKUA010000009.1 Protein Homology CDS 11620 12114 . + 0 ID=cds-WP_023581440.1;Parent=gene-L2557_RS00715;Dbxref=GenBank:WP_023581440.1;Name=WP_023581440.1;gbkey=CDS;gene=agaV;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244211.1;locus_tag=L2557_RS00715;product=PTS N-acetylgalactosamine transporter subunit IIB;protein_id=WP_023581440.1;transl_table=11 NZ_JAIKUA010000009.1 RefSeq gene 12162 12929 . + . ID=gene-L2557_RS00720;Name=agaW;gbkey=Gene;gene=agaW;gene_biotype=protein_coding;locus_tag=L2557_RS00720 NZ_JAIKUA010000009.1 Protein Homology CDS 12162 12929 . + 0 ID=cds-WP_075673689.1;Parent=gene-L2557_RS00720;Dbxref=GenBank:WP_075673689.1;Name=WP_075673689.1;gbkey=CDS;gene=agaW;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209879.1;locus_tag=L2557_RS00720;product=PTS N-acetylgalactosamine transporter subunit IIC;protein_id=WP_075673689.1;transl_table=11 NZ_JAIKUA010000009.1 RefSeq gene 12919 13809 . + . ID=gene-L2557_RS00725;Name=L2557_RS00725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00725 NZ_JAIKUA010000009.1 Protein Homology CDS 12919 13809 . + 0 ID=cds-WP_072063421.1;Parent=gene-L2557_RS00725;Dbxref=GenBank:WP_072063421.1;Name=WP_072063421.1;Ontology_term=GO:0008643,GO:0009401,GO:0016310,GO:0016301,GO:1902495;gbkey=CDS;go_component=transmembrane transporter complex|1902495||IEA;go_function=kinase activity|0016301||IEA;go_process=carbohydrate transport|0008643||IEA,phosphoenolpyruvate-dependent sugar phosphotransferase system|0009401||IEA,phosphorylation|0016310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244207.1;locus_tag=L2557_RS00725;product=PTS system mannose/fructose/sorbose family transporter subunit IID;protein_id=WP_072063421.1;transl_table=11 NZ_JAIKUA010000009.1 RefSeq gene 13909 14343 . + . ID=gene-L2557_RS00730;Name=agaF;gbkey=Gene;gene=agaF;gene_biotype=protein_coding;locus_tag=L2557_RS00730 NZ_JAIKUA010000009.1 Protein Homology CDS 13909 14343 . + 0 ID=cds-WP_075673690.1;Parent=gene-L2557_RS00730;Dbxref=GenBank:WP_075673690.1;Name=WP_075673690.1;gbkey=CDS;gene=agaF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012104706.1;locus_tag=L2557_RS00730;product=PTS galactosamine/N-acetylgalactosamine transporter subunit IIA;protein_id=WP_075673690.1;transl_table=11 NZ_JAIKUA010000009.1 RefSeq gene 14340 15509 . + . ID=gene-L2557_RS00735;Name=nagA;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=L2557_RS00735 NZ_JAIKUA010000009.1 Protein Homology CDS 14340 15509 . + 0 ID=cds-WP_223673986.1;Parent=gene-L2557_RS00735;Dbxref=GenBank:WP_223673986.1;Name=WP_223673986.1;Ontology_term=GO:0006044,GO:0008448;gbkey=CDS;gene=nagA;go_function=N-acetylglucosamine-6-phosphate deacetylase activity|0008448||IEA;go_process=N-acetylglucosamine metabolic process|0006044||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017627907.1;locus_tag=L2557_RS00735;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=WP_223673986.1;transl_table=11 NZ_JAIKUA010000009.1 RefSeq gene 15552 16382 . + . ID=gene-L2557_RS00740;Name=kduI;gbkey=Gene;gene=kduI;gene_biotype=protein_coding;locus_tag=L2557_RS00740 NZ_JAIKUA010000009.1 Protein Homology CDS 15552 16382 . + 0 ID=cds-WP_075673692.1;Parent=gene-L2557_RS00740;Dbxref=GenBank:WP_075673692.1;Name=WP_075673692.1;Ontology_term=GO:0045490,GO:0008697;gbkey=CDS;gene=kduI;go_function=4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity|0008697||IEA;go_process=pectin catabolic process|0045490||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533834.1;locus_tag=L2557_RS00740;product=5-dehydro-4-deoxy-D-glucuronate isomerase;protein_id=WP_075673692.1;transl_table=11 NZ_JAIKUA010000009.1 RefSeq gene 16461 17216 . + . ID=gene-L2557_RS00745;Name=kduD;gbkey=Gene;gene=kduD;gene_biotype=protein_coding;locus_tag=L2557_RS00745 NZ_JAIKUA010000009.1 Protein Homology CDS 16461 17216 . + 0 ID=cds-WP_075673693.1;Parent=gene-L2557_RS00745;Dbxref=GenBank:WP_075673693.1;Name=WP_075673693.1;Ontology_term=GO:0000272,GO:0016491,GO:0051287;gbkey=CDS;gene=kduD;go_function=oxidoreductase activity|0016491||IEA,NAD binding|0051287||IEA;go_process=polysaccharide catabolic process|0000272||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_002209883.1;locus_tag=L2557_RS00745;product=2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD;protein_id=WP_075673693.1;transl_table=11 NZ_JAIKUA010000009.1 RefSeq gene 17234 18295 . + . ID=gene-L2557_RS00750;Name=L2557_RS00750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS00750 NZ_JAIKUA010000009.1 Protein Homology CDS 17234 18295 . + 0 ID=cds-WP_075673694.1;Parent=gene-L2557_RS00750;Dbxref=GenBank:WP_075673694.1;Name=WP_075673694.1;Ontology_term=GO:0005975,GO:0016787;gbkey=CDS;go_function=hydrolase activity|0016787||IEA;go_process=carbohydrate metabolic process|0005975||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533832.1;locus_tag=L2557_RS00750;product=glycoside hydrolase family 88/105 protein;protein_id=WP_075673694.1;transl_table=11 ##sequence-region NZ_JAIKUA010000090.1 1 4097 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000090.1 RefSeq region 1 4097 . + . ID=NZ_JAIKUA010000090.1:1..4097;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000090.1 RefSeq gene 161 493 . - . ID=gene-L2557_RS06845;Name=L2557_RS06845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06845 NZ_JAIKUA010000090.1 GeneMarkS-2+ CDS 161 493 . - 0 ID=cds-WP_069369151.1;Parent=gene-L2557_RS06845;Dbxref=GenBank:WP_069369151.1;Name=WP_069369151.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS06845;product=hypothetical protein;protein_id=WP_069369151.1;transl_table=11 NZ_JAIKUA010000090.1 RefSeq gene 490 4047 . - . ID=gene-L2557_RS06850;Name=L2557_RS06850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06850 NZ_JAIKUA010000090.1 Protein Homology CDS 490 4047 . - 0 ID=cds-WP_235409951.1;Parent=gene-L2557_RS06850;Dbxref=GenBank:WP_235409951.1;Name=WP_235409951.1;gbkey=CDS;inference=COORDINATES: protein motif:HMM:NF016703.6;locus_tag=L2557_RS06850;product=DUF637 domain-containing protein;protein_id=WP_235409951.1;transl_table=11 ##sequence-region NZ_JAIKUA010000091.1 1 483 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000091.1 RefSeq region 1 483 . + . ID=NZ_JAIKUA010000091.1:1..483;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000091.1 RefSeq gene 1 483 . + . ID=gene-L2557_RS06855;Name=L2557_RS06855;end_range=483,.;gbkey=Gene;gene_biotype=rRNA;locus_tag=L2557_RS06855;partial=true;start_range=.,1 NZ_JAIKUA010000091.1 cmsearch rRNA 1 483 . + . ID=rna-L2557_RS06855;Parent=gene-L2557_RS06855;Dbxref=RFAM:RF02541;end_range=483,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=L2557_RS06855;partial=true;product=23S ribosomal RNA;start_range=.,1 NZ_JAIKUA010000091.1 cmsearch exon 1 483 . + . ID=exon-L2557_RS06855-1;Parent=rna-L2557_RS06855;Dbxref=RFAM:RF02541;end_range=483,.;gbkey=rRNA;inference=COORDINATES: profile:INFERNAL:1.1.5;locus_tag=L2557_RS06855;partial=true;product=23S ribosomal RNA;start_range=.,1 ##sequence-region NZ_JAIKUA010000092.1 1 19887 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000092.1 RefSeq region 1 19887 . + . ID=NZ_JAIKUA010000092.1:1..19887;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000092.1 RefSeq gene 1 455 . - . ID=gene-L2557_RS06860;Name=L2557_RS06860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06860;partial=true;start_range=.,1 NZ_JAIKUA010000092.1 Protein Homology CDS 1 455 . - 0 ID=cds-WP_235409952.1;Parent=gene-L2557_RS06860;Dbxref=GenBank:WP_235409952.1;Name=WP_235409952.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827365.1;locus_tag=L2557_RS06860;partial=true;product=TonB-dependent receptor;protein_id=WP_235409952.1;start_range=.,1;transl_table=11 NZ_JAIKUA010000092.1 RefSeq gene 729 1577 . - . ID=gene-L2557_RS06865;Name=modD;gbkey=Gene;gene=modD;gene_biotype=protein_coding;locus_tag=L2557_RS06865 NZ_JAIKUA010000092.1 Protein Homology CDS 729 1577 . - 0 ID=cds-WP_235409953.1;Parent=gene-L2557_RS06865;Dbxref=GenBank:WP_235409953.1;Name=WP_235409953.1;Ontology_term=GO:0004514;gbkey=CDS;gene=modD;go_function=nicotinate-nucleotide diphosphorylase (carboxylating) activity|0004514||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368468.1;locus_tag=L2557_RS06865;product=ModD protein;protein_id=WP_235409953.1;transl_table=11 NZ_JAIKUA010000092.1 RefSeq gene 1574 2398 . - . ID=gene-L2557_RS06870;Name=L2557_RS06870;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06870 NZ_JAIKUA010000092.1 Protein Homology CDS 1574 2398 . - 0 ID=cds-WP_075673499.1;Parent=gene-L2557_RS06870;Dbxref=GenBank:WP_075673499.1;Name=WP_075673499.1;Ontology_term=GO:0008168,GO:1904047;gbkey=CDS;go_function=methyltransferase activity|0008168||IEA,S-adenosyl-L-methionine binding|1904047||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368467.1;locus_tag=L2557_RS06870;product=class I SAM-dependent methyltransferase;protein_id=WP_075673499.1;transl_table=11 NZ_JAIKUA010000092.1 RefSeq gene 2385 3179 . - . ID=gene-L2557_RS06875;Name=L2557_RS06875;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06875 NZ_JAIKUA010000092.1 Protein Homology CDS 2385 3179 . - 0 ID=cds-WP_099660478.1;Parent=gene-L2557_RS06875;Dbxref=GenBank:WP_099660478.1;Name=WP_099660478.1;Ontology_term=GO:0005524,GO:0016887,GO:0042626,GO:0140359;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249217.1;locus_tag=L2557_RS06875;product=ABC transporter ATP-binding protein;protein_id=WP_099660478.1;transl_table=11 NZ_JAIKUA010000092.1 RefSeq gene 3179 4174 . - . ID=gene-L2557_RS06880;Name=L2557_RS06880;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06880 NZ_JAIKUA010000092.1 Protein Homology CDS 3179 4174 . - 0 ID=cds-WP_075673506.1;Parent=gene-L2557_RS06880;Dbxref=GenBank:WP_075673506.1;Name=WP_075673506.1;Ontology_term=GO:0042626,GO:0140359;gbkey=CDS;go_function=ATPase-coupled transmembrane transporter activity|0042626||IEA,ABC-type transporter activity|0140359||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536260.1;locus_tag=L2557_RS06880;product=FecCD family ABC transporter permease;protein_id=WP_075673506.1;transl_table=11 NZ_JAIKUA010000092.1 RefSeq gene 4171 5202 . - . ID=gene-L2557_RS06885;Name=L2557_RS06885;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06885 NZ_JAIKUA010000092.1 Protein Homology CDS 4171 5202 . - 0 ID=cds-WP_099660477.1;Parent=gene-L2557_RS06885;Dbxref=GenBank:WP_099660477.1;Name=WP_099660477.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628511.1;locus_tag=L2557_RS06885;product=iron ABC transporter substrate-binding protein;protein_id=WP_099660477.1;transl_table=11 NZ_JAIKUA010000092.1 RefSeq gene 5435 6430 . + . ID=gene-L2557_RS06890;Name=gntR;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=L2557_RS06890 NZ_JAIKUA010000092.1 Protein Homology CDS 5435 6430 . + 0 ID=cds-WP_099660476.1;Parent=gene-L2557_RS06890;Dbxref=GenBank:WP_099660476.1;Name=WP_099660476.1;Ontology_term=GO:0006355,GO:0003677,GO:0003700;gbkey=CDS;gene=gntR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245816.1;locus_tag=L2557_RS06890;product=gluconate operon transcriptional repressor GntR;protein_id=WP_099660476.1;transl_table=11 NZ_JAIKUA010000092.1 RefSeq gene 6747 7301 . + . ID=gene-L2557_RS06895;Name=gntK;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=L2557_RS06895 NZ_JAIKUA010000092.1 Protein Homology CDS 6747 7301 . + 0 ID=cds-WP_075673495.1;Parent=gene-L2557_RS06895;Dbxref=GenBank:WP_075673495.1;Name=WP_075673495.1;gbkey=CDS;gene=gntK;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250142.1;locus_tag=L2557_RS06895;product=gluconokinase;protein_id=WP_075673495.1;transl_table=11 NZ_JAIKUA010000092.1 RefSeq gene 7298 8635 . + . ID=gene-L2557_RS06900;Name=gntU;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=L2557_RS06900 NZ_JAIKUA010000092.1 Protein Homology CDS 7298 8635 . + 0 ID=cds-WP_075673494.1;Parent=gene-L2557_RS06900;Dbxref=GenBank:WP_075673494.1;Name=WP_075673494.1;Ontology_term=GO:0035429,GO:0015128,GO:0016020;gbkey=CDS;gene=gntU;go_component=membrane|0016020||IEA;go_function=gluconate transmembrane transporter activity|0015128||IEA;go_process=gluconate transmembrane transport|0035429||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012847014.1;locus_tag=L2557_RS06900;product=gluconate transporter;protein_id=WP_075673494.1;transl_table=11 NZ_JAIKUA010000092.1 RefSeq gene 8787 9725 . + . ID=gene-L2557_RS06905;Name=L2557_RS06905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06905 NZ_JAIKUA010000092.1 Protein Homology CDS 8787 9725 . + 0 ID=cds-WP_075673493.1;Parent=gene-L2557_RS06905;Dbxref=GenBank:WP_075673493.1;Name=WP_075673493.1;Ontology_term=GO:0006935,GO:0007165,GO:0004888,GO:0008270,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=transmembrane signaling receptor activity|0004888||IEA,zinc ion binding|0008270||IEA;go_process=chemotaxis|0006935||IEA,signal transduction|0007165||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249221.1;locus_tag=L2557_RS06905;product=methyl-accepting chemotaxis protein;protein_id=WP_075673493.1;transl_table=11 NZ_JAIKUA010000092.1 RefSeq gene 9794 11026 . - . ID=gene-L2557_RS06910;Name=L2557_RS06910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06910 NZ_JAIKUA010000092.1 Protein Homology CDS 9794 11026 . - 0 ID=cds-WP_099660475.1;Parent=gene-L2557_RS06910;Dbxref=GenBank:WP_099660475.1;Name=WP_099660475.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827366.1;locus_tag=L2557_RS06910;product=SGNH/GDSL hydrolase family protein;protein_id=WP_099660475.1;transl_table=11 NZ_JAIKUA010000092.1 RefSeq gene 11001 12203 . - . ID=gene-L2557_RS06915;Name=L2557_RS06915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06915 NZ_JAIKUA010000092.1 Protein Homology CDS 11001 12203 . - 0 ID=cds-WP_075673491.1;Parent=gene-L2557_RS06915;Dbxref=GenBank:WP_075673491.1;Name=WP_075673491.1;Ontology_term=GO:0016788;gbkey=CDS;go_function=hydrolase activity%2C acting on ester bonds|0016788||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245807.1;locus_tag=L2557_RS06915;product=SGNH/GDSL hydrolase family protein;protein_id=WP_075673491.1;transl_table=11 NZ_JAIKUA010000092.1 RefSeq gene 12190 13608 . - . ID=gene-L2557_RS06920;Name=L2557_RS06920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06920 NZ_JAIKUA010000092.1 Protein Homology CDS 12190 13608 . - 0 ID=cds-WP_099660474.1;Parent=gene-L2557_RS06920;Dbxref=GenBank:WP_099660474.1;Name=WP_099660474.1;Ontology_term=GO:0008374;gbkey=CDS;go_function=O-acyltransferase activity|0008374||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245806.1;locus_tag=L2557_RS06920;product=MBOAT family O-acyltransferase;protein_id=WP_099660474.1;transl_table=11 NZ_JAIKUA010000092.1 RefSeq gene 13773 14567 . - . ID=gene-L2557_RS06925;Name=L2557_RS06925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06925 NZ_JAIKUA010000092.1 Protein Homology CDS 13773 14567 . - 0 ID=cds-WP_075673489.1;Parent=gene-L2557_RS06925;Dbxref=GenBank:WP_075673489.1;Name=WP_075673489.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004250146.1;locus_tag=L2557_RS06925;product=protein bax;protein_id=WP_075673489.1;transl_table=11 NZ_JAIKUA010000092.1 RefSeq gene 14843 15997 . - . ID=gene-L2557_RS06930;Name=L2557_RS06930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06930 NZ_JAIKUA010000092.1 Protein Homology CDS 14843 15997 . - 0 ID=cds-WP_075673488.1;Parent=gene-L2557_RS06930;Dbxref=GenBank:WP_075673488.1;Name=WP_075673488.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536245.1;locus_tag=L2557_RS06930;product=DUF4056 domain-containing protein;protein_id=WP_075673488.1;transl_table=11 NZ_JAIKUA010000092.1 RefSeq gene 15997 17139 . - . ID=gene-L2557_RS06935;Name=L2557_RS06935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06935 NZ_JAIKUA010000092.1 Protein Homology CDS 15997 17139 . - 0 ID=cds-WP_235409954.1;Parent=gene-L2557_RS06935;Dbxref=GenBank:WP_235409954.1;Name=WP_235409954.1;Ontology_term=GO:0019867;gbkey=CDS;go_component=outer membrane|0019867||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004245803.1;locus_tag=L2557_RS06935;product=BamA/TamA family outer membrane protein;protein_id=WP_235409954.1;transl_table=11 NZ_JAIKUA010000092.1 RefSeq gene 17139 18131 . - . ID=gene-L2557_RS06940;Name=L2557_RS06940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06940 NZ_JAIKUA010000092.1 Protein Homology CDS 17139 18131 . - 0 ID=cds-WP_156734179.1;Parent=gene-L2557_RS06940;Dbxref=GenBank:WP_156734179.1;Name=WP_156734179.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249227.1;locus_tag=L2557_RS06940;product=hypothetical protein;protein_id=WP_156734179.1;transl_table=11 NZ_JAIKUA010000092.1 RefSeq gene 18488 18943 . + . ID=gene-L2557_RS06945;Name=L2557_RS06945;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06945 NZ_JAIKUA010000092.1 Protein Homology CDS 18488 18943 . + 0 ID=cds-WP_075673485.1;Parent=gene-L2557_RS06945;Dbxref=GenBank:WP_075673485.1;Name=WP_075673485.1;Ontology_term=GO:0006282;gbkey=CDS;go_process=regulation of DNA repair|0006282||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368461.1;locus_tag=L2557_RS06945;product=regulatory protein RecX;protein_id=WP_075673485.1;transl_table=11 NZ_JAIKUA010000092.1 RefSeq gene 18948 19820 . - . ID=gene-L2557_RS06950;Name=L2557_RS06950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06950 NZ_JAIKUA010000092.1 Protein Homology CDS 18948 19820 . - 0 ID=cds-WP_180273034.1;Parent=gene-L2557_RS06950;Dbxref=GenBank:WP_180273034.1;Name=WP_180273034.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: protein motif:HMM:NF015431.6;locus_tag=L2557_RS06950;product=LysR family transcriptional regulator;protein_id=WP_180273034.1;transl_table=11 ##sequence-region NZ_JAIKUA010000093.1 1 7826 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000093.1 RefSeq region 1 7826 . + . ID=NZ_JAIKUA010000093.1:1..7826;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000093.1 RefSeq gene 1128 1212 . + . ID=gene-L2557_RS06955;Name=L2557_RS06955;gbkey=Gene;gene_biotype=tRNA;locus_tag=L2557_RS06955 NZ_JAIKUA010000093.1 tRNAscan-SE tRNA 1128 1212 . + . ID=rna-L2557_RS06955;Parent=gene-L2557_RS06955;anticodon=(pos:1162..1164);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS06955;product=tRNA-Leu NZ_JAIKUA010000093.1 tRNAscan-SE exon 1128 1212 . + . ID=exon-L2557_RS06955-1;Parent=rna-L2557_RS06955;anticodon=(pos:1162..1164);gbkey=tRNA;inference=COORDINATES: profile:tRNAscan-SE:2.0.12;locus_tag=L2557_RS06955;product=tRNA-Leu NZ_JAIKUA010000093.1 RefSeq pseudogene 1372 1548 . + . ID=gene-L2557_RS06960;Name=L2557_RS06960;end_range=1548,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS06960;partial=true;pseudo=true;start_range=.,1372 NZ_JAIKUA010000093.1 Protein Homology CDS 1372 1548 . + 0 ID=cds-L2557_RS06960;Parent=gene-L2557_RS06960;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus and C-terminus;Ontology_term=GO:0003677;end_range=1548,.;gbkey=CDS;go_function=DNA binding|0003677||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001218945.1;locus_tag=L2557_RS06960;partial=true;product=Arm DNA-binding domain-containing protein;pseudo=true;start_range=.,1372;transl_table=11 NZ_JAIKUA010000093.1 RefSeq gene 1770 1991 . - . ID=gene-L2557_RS06965;Name=L2557_RS06965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06965 NZ_JAIKUA010000093.1 GeneMarkS-2+ CDS 1770 1991 . - 0 ID=cds-WP_235409955.1;Parent=gene-L2557_RS06965;Dbxref=GenBank:WP_235409955.1;Name=WP_235409955.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS06965;product=hypothetical protein;protein_id=WP_235409955.1;transl_table=11 NZ_JAIKUA010000093.1 RefSeq gene 2484 3542 . - . ID=gene-L2557_RS06970;Name=L2557_RS06970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06970 NZ_JAIKUA010000093.1 Protein Homology CDS 2484 3542 . - 0 ID=cds-WP_075672220.1;Parent=gene-L2557_RS06970;Dbxref=GenBank:WP_075672220.1;Name=WP_075672220.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004904619.1;locus_tag=L2557_RS06970;product=fimbrial protein;protein_id=WP_075672220.1;transl_table=11 NZ_JAIKUA010000093.1 RefSeq gene 3552 6056 . - . ID=gene-L2557_RS06975;Name=L2557_RS06975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06975 NZ_JAIKUA010000093.1 Protein Homology CDS 3552 6056 . - 0 ID=cds-WP_235409956.1;Parent=gene-L2557_RS06975;Dbxref=GenBank:WP_235409956.1;Name=WP_235409956.1;Ontology_term=GO:0009297,GO:0015473,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=fimbrial usher porin activity|0015473||IEA;go_process=pilus assembly|0009297||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004237919.1;locus_tag=L2557_RS06975;product=fimbria/pilus outer membrane usher protein;protein_id=WP_235409956.1;transl_table=11 NZ_JAIKUA010000093.1 RefSeq gene 6075 6755 . - . ID=gene-L2557_RS06980;Name=L2557_RS06980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06980 NZ_JAIKUA010000093.1 Protein Homology CDS 6075 6755 . - 0 ID=cds-WP_075672224.1;Parent=gene-L2557_RS06980;Dbxref=GenBank:WP_075672224.1;Name=WP_075672224.1;Ontology_term=GO:0006457,GO:0043711,GO:0030288;gbkey=CDS;go_component=outer membrane-bounded periplasmic space|0030288||IEA;go_process=protein folding|0006457||IEA,pilus organization|0043711||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004904623.1;locus_tag=L2557_RS06980;product=fimbrial biogenesis chaperone;protein_id=WP_075672224.1;transl_table=11 NZ_JAIKUA010000093.1 RefSeq gene 6814 7386 . - . ID=gene-L2557_RS06985;Name=L2557_RS06985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06985 NZ_JAIKUA010000093.1 Protein Homology CDS 6814 7386 . - 0 ID=cds-WP_075672226.1;Parent=gene-L2557_RS06985;Dbxref=GenBank:WP_075672226.1;Name=WP_075672226.1;Ontology_term=GO:0007155,GO:0009289;gbkey=CDS;go_component=pilus|0009289||IEA;go_process=cell adhesion|0007155||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004922560.1;locus_tag=L2557_RS06985;product=fimbrial protein;protein_id=WP_075672226.1;transl_table=11 ##sequence-region NZ_JAIKUA010000094.1 1 31737 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000094.1 RefSeq region 1 31737 . + . ID=NZ_JAIKUA010000094.1:1..31737;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000094.1 RefSeq gene 289 1974 . + . ID=gene-L2557_RS06990;Name=L2557_RS06990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS06990 NZ_JAIKUA010000094.1 Protein Homology CDS 289 1974 . + 0 ID=cds-WP_099659317.1;Parent=gene-L2557_RS06990;Dbxref=GenBank:WP_099659317.1;Name=WP_099659317.1;Ontology_term=GO:0006811,GO:0015031,GO:0015288,GO:0046930;gbkey=CDS;go_component=pore complex|0046930||IEA;go_function=porin activity|0015288||IEA;go_process=monoatomic ion transport|0006811||IEA,protein transport|0015031||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244094.1;locus_tag=L2557_RS06990;product=ShlB/FhaC/HecB family hemolysin secretion/activation protein;protein_id=WP_099659317.1;transl_table=11 NZ_JAIKUA010000094.1 RefSeq gene 2008 6741 . + . ID=gene-L2557_RS06995;Name=hpmA;gbkey=Gene;gene=hpmA;gene_biotype=protein_coding;locus_tag=L2557_RS06995 NZ_JAIKUA010000094.1 Protein Homology CDS 2008 6741 . + 0 ID=cds-WP_235409957.1;Parent=gene-L2557_RS06995;Dbxref=GenBank:WP_235409957.1;Name=WP_235409957.1;gbkey=CDS;gene=hpmA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244096.1;locus_tag=L2557_RS06995;product=calcium-independent hemolysin HpmA;protein_id=WP_235409957.1;transl_table=11 NZ_JAIKUA010000094.1 RefSeq gene 7033 9522 . + . ID=gene-L2557_RS07000;Name=L2557_RS07000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07000 NZ_JAIKUA010000094.1 Protein Homology CDS 7033 9522 . + 0 ID=cds-WP_235409958.1;Parent=gene-L2557_RS07000;Dbxref=GenBank:WP_235409958.1;Name=WP_235409958.1;Ontology_term=GO:0006812,GO:0005524,GO:0016887,GO:0019829,GO:0042626,GO:0046872,GO:0140358,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA,ATPase-coupled monoatomic cation transmembrane transporter activity|0019829||IEA,ATPase-coupled transmembrane transporter activity|0042626||IEA,metal ion binding|0046872||IEA,P-type transmembrane transporter activity|0140358||IEA;go_process=monoatomic cation transport|0006812||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244098.1;locus_tag=L2557_RS07000;product=heavy metal translocating P-type ATPase;protein_id=WP_235409958.1;transl_table=11 NZ_JAIKUA010000094.1 RefSeq gene 9631 10080 . + . ID=gene-L2557_RS07005;Name=cueR;gbkey=Gene;gene=cueR;gene_biotype=protein_coding;locus_tag=L2557_RS07005 NZ_JAIKUA010000094.1 Protein Homology CDS 9631 10080 . + 0 ID=cds-WP_235409959.1;Parent=gene-L2557_RS07005;Dbxref=GenBank:WP_235409959.1;Name=WP_235409959.1;Ontology_term=GO:0045893,GO:0046688,GO:0003677,GO:0003700,GO:0005507;gbkey=CDS;gene=cueR;go_function=DNA binding|0003677||IEA,DNA-binding transcription factor activity|0003700||IEA,copper ion binding|0005507||IEA;go_process=positive regulation of DNA-templated transcription|0045893||IEA,response to copper ion|0046688||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001020582.1;locus_tag=L2557_RS07005;product=Cu(I)-responsive transcriptional regulator;protein_id=WP_235409959.1;transl_table=11 NZ_JAIKUA010000094.1 RefSeq gene 10175 12883 . - . ID=gene-L2557_RS07010;Name=secA;gbkey=Gene;gene=secA;gene_biotype=protein_coding;locus_tag=L2557_RS07010 NZ_JAIKUA010000094.1 Protein Homology CDS 10175 12883 . - 0 ID=cds-WP_099659313.1;Parent=gene-L2557_RS07010;Dbxref=GenBank:WP_099659313.1;Name=WP_099659313.1;Ontology_term=GO:0006605,GO:0006886,GO:0017038,GO:0005524;gbkey=CDS;gene=secA;go_function=ATP binding|0005524||IEA;go_process=protein targeting|0006605||IEA,intracellular protein transport|0006886||IEA,protein import|0017038||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244101.1;locus_tag=L2557_RS07010;product=preprotein translocase subunit SecA;protein_id=WP_099659313.1;transl_table=11 NZ_JAIKUA010000094.1 RefSeq gene 12982 13509 . - . ID=gene-L2557_RS07015;Name=secM;gbkey=Gene;gene=secM;gene_biotype=protein_coding;locus_tag=L2557_RS07015 NZ_JAIKUA010000094.1 Protein Homology CDS 12982 13509 . - 0 ID=cds-WP_156733825.1;Parent=gene-L2557_RS07015;Dbxref=GenBank:WP_156733825.1;Name=WP_156733825.1;Ontology_term=GO:0045182;gbkey=CDS;gene=secM;go_function=translation regulator activity|0045182||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244104.1;locus_tag=L2557_RS07015;product=secA translation cis-regulator SecM;protein_id=WP_156733825.1;transl_table=11 NZ_JAIKUA010000094.1 RefSeq gene 13555 14070 . + . ID=gene-L2557_RS07020;Name=L2557_RS07020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07020 NZ_JAIKUA010000094.1 Protein Homology CDS 13555 14070 . + 0 ID=cds-WP_075670793.1;Parent=gene-L2557_RS07020;Dbxref=GenBank:WP_075670793.1;Name=WP_075670793.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005156847.1;locus_tag=L2557_RS07020;product=DUF721 domain-containing protein;protein_id=WP_075670793.1;transl_table=11 NZ_JAIKUA010000094.1 RefSeq gene 14105 15022 . - . ID=gene-L2557_RS07025;Name=lpxC;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=L2557_RS07025 NZ_JAIKUA010000094.1 Protein Homology CDS 14105 15022 . - 0 ID=cds-WP_036913397.1;Parent=gene-L2557_RS07025;Dbxref=GenBank:WP_036913397.1;Name=WP_036913397.1;Ontology_term=GO:0009245,GO:0103117;gbkey=CDS;gene=lpxC;go_function=UDP-3-O-acyl-N-acetylglucosamine deacetylase activity|0103117||IEA;go_process=lipid A biosynthetic process|0009245||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368233.1;locus_tag=L2557_RS07025;product=UDP-3-O-acyl-N-acetylglucosamine deacetylase;protein_id=WP_036913397.1;transl_table=11 NZ_JAIKUA010000094.1 RefSeq gene 15121 16287 . - . ID=gene-L2557_RS07030;Name=ftsZ;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=L2557_RS07030 NZ_JAIKUA010000094.1 Protein Homology CDS 15121 16287 . - 0 ID=cds-WP_023581499.1;Parent=gene-L2557_RS07030;Dbxref=GenBank:WP_023581499.1;Name=WP_023581499.1;Ontology_term=GO:0000910,GO:0003924,GO:0005525;gbkey=CDS;gene=ftsZ;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;go_process=cytokinesis|0000910||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015965916.1;locus_tag=L2557_RS07030;product=cell division protein FtsZ;protein_id=WP_023581499.1;transl_table=11 NZ_JAIKUA010000094.1 RefSeq gene 16358 17614 . - . ID=gene-L2557_RS07035;Name=ftsA;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=L2557_RS07035 NZ_JAIKUA010000094.1 Protein Homology CDS 16358 17614 . - 0 ID=cds-WP_006533748.1;Parent=gene-L2557_RS07035;Dbxref=GenBank:WP_006533748.1;Name=WP_006533748.1;Ontology_term=GO:0051301,GO:0005515;gbkey=CDS;gene=ftsA;go_function=protein binding|0005515||IEA;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005225115.1;locus_tag=L2557_RS07035;product=cell division protein FtsA;protein_id=WP_006533748.1;transl_table=11 NZ_JAIKUA010000094.1 RefSeq gene 17660 18445 . - . ID=gene-L2557_RS07040;Name=ftsQ;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=L2557_RS07040 NZ_JAIKUA010000094.1 Protein Homology CDS 17660 18445 . - 0 ID=cds-WP_075670791.1;Parent=gene-L2557_RS07040;Dbxref=GenBank:WP_075670791.1;Name=WP_075670791.1;Ontology_term=GO:0090529;gbkey=CDS;gene=ftsQ;go_process=cell septum assembly|0090529||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533749.1;locus_tag=L2557_RS07040;product=cell division protein FtsQ;protein_id=WP_075670791.1;transl_table=11 NZ_JAIKUA010000094.1 RefSeq gene 18447 18803 . - . ID=gene-L2557_RS07045;Name=L2557_RS07045;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07045 NZ_JAIKUA010000094.1 Protein Homology CDS 18447 18803 . - 0 ID=cds-WP_099659312.1;Parent=gene-L2557_RS07045;Dbxref=GenBank:WP_099659312.1;Name=WP_099659312.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006533750.1;locus_tag=L2557_RS07045;product=hypothetical protein;protein_id=WP_099659312.1;transl_table=11 NZ_JAIKUA010000094.1 RefSeq gene 18809 20272 . - . ID=gene-L2557_RS07050;Name=murC;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=L2557_RS07050 NZ_JAIKUA010000094.1 Protein Homology CDS 18809 20272 . - 0 ID=cds-WP_099659311.1;Parent=gene-L2557_RS07050;Dbxref=GenBank:WP_099659311.1;Name=WP_099659311.1;Ontology_term=GO:0009252,GO:0008763;gbkey=CDS;gene=murC;go_function=UDP-N-acetylmuramate-L-alanine ligase activity|0008763||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017627930.1;locus_tag=L2557_RS07050;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=WP_099659311.1;transl_table=11 NZ_JAIKUA010000094.1 RefSeq gene 20314 21396 . - . ID=gene-L2557_RS07055;Name=murG;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=L2557_RS07055 NZ_JAIKUA010000094.1 Protein Homology CDS 20314 21396 . - 0 ID=cds-WP_075670785.1;Parent=gene-L2557_RS07055;Dbxref=GenBank:WP_075670785.1;Name=WP_075670785.1;Ontology_term=GO:0009252,GO:0050511;gbkey=CDS;gene=murG;go_function=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity|0050511||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244116.1;locus_tag=L2557_RS07055;product=undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase;protein_id=WP_075670785.1;transl_table=11 NZ_JAIKUA010000094.1 RefSeq gene 21393 22586 . - . ID=gene-L2557_RS07060;Name=ftsW;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=L2557_RS07060 NZ_JAIKUA010000094.1 Protein Homology CDS 21393 22586 . - 0 ID=cds-WP_075670783.1;Parent=gene-L2557_RS07060;Dbxref=GenBank:WP_075670783.1;Name=WP_075670783.1;Ontology_term=GO:0051301;gbkey=CDS;gene=ftsW;go_process=cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244117.1;locus_tag=L2557_RS07060;product=cell division protein FtsW;protein_id=WP_075670783.1;transl_table=11 NZ_JAIKUA010000094.1 RefSeq gene 22586 23896 . - . ID=gene-L2557_RS07065;Name=murD;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=L2557_RS07065 NZ_JAIKUA010000094.1 Protein Homology CDS 22586 23896 . - 0 ID=cds-WP_099659310.1;Parent=gene-L2557_RS07065;Dbxref=GenBank:WP_099659310.1;Name=WP_099659310.1;Ontology_term=GO:0008360,GO:0009252,GO:0051301,GO:0005524,GO:0008764,GO:0005737;gbkey=CDS;gene=murD;go_component=cytoplasm|0005737||IEA;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoylalanine-D-glutamate ligase activity|0008764||IEA;go_process=regulation of cell shape|0008360||IEA,peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368235.1;locus_tag=L2557_RS07065;product=UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase;protein_id=WP_099659310.1;transl_table=11 NZ_JAIKUA010000094.1 RefSeq gene 23898 24980 . - . ID=gene-L2557_RS07070;Name=mraY;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=L2557_RS07070 NZ_JAIKUA010000094.1 Protein Homology CDS 23898 24980 . - 0 ID=cds-WP_023581493.1;Parent=gene-L2557_RS07070;Dbxref=GenBank:WP_023581493.1;Name=WP_023581493.1;Ontology_term=GO:0009252,GO:0008963,GO:0016020;gbkey=CDS;gene=mraY;go_component=membrane|0016020||IEA;go_function=phospho-N-acetylmuramoyl-pentapeptide-transferase activity|0008963||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005124610.1;locus_tag=L2557_RS07070;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=WP_023581493.1;transl_table=11 NZ_JAIKUA010000094.1 RefSeq gene 24974 26356 . - . ID=gene-L2557_RS07075;Name=murF;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=L2557_RS07075 NZ_JAIKUA010000094.1 Protein Homology CDS 24974 26356 . - 0 ID=cds-WP_099659309.1;Parent=gene-L2557_RS07075;Dbxref=GenBank:WP_099659309.1;Name=WP_099659309.1;Ontology_term=GO:0009058,GO:0071555,GO:0005524,GO:0047480;gbkey=CDS;gene=murF;go_function=ATP binding|0005524||IEA,UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity|0047480||IEA;go_process=biosynthetic process|0009058||IEA,cell wall organization|0071555||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017627929.1;locus_tag=L2557_RS07075;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=WP_099659309.1;transl_table=11 NZ_JAIKUA010000094.1 RefSeq gene 26353 27840 . - . ID=gene-L2557_RS07080;Name=murE;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=L2557_RS07080 NZ_JAIKUA010000094.1 Protein Homology CDS 26353 27840 . - 0 ID=cds-WP_099659308.1;Parent=gene-L2557_RS07080;Dbxref=GenBank:WP_099659308.1;Name=WP_099659308.1;Ontology_term=GO:0008360,GO:0009058,GO:0051301,GO:0005524,GO:0016881;gbkey=CDS;gene=murE;go_function=ATP binding|0005524||IEA,acid-amino acid ligase activity|0016881||IEA;go_process=regulation of cell shape|0008360||IEA,biosynthetic process|0009058||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827190.1;locus_tag=L2557_RS07080;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=WP_099659308.1;transl_table=11 NZ_JAIKUA010000094.1 RefSeq gene 27827 29623 . - . ID=gene-L2557_RS07085;Name=ftsI;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=L2557_RS07085 NZ_JAIKUA010000094.1 Protein Homology CDS 27827 29623 . - 0 ID=cds-WP_099659307.1;Parent=gene-L2557_RS07085;Dbxref=GenBank:WP_099659307.1;Name=WP_099659307.1;Ontology_term=GO:0009252,GO:0051301,GO:0008658,GO:0008955,GO:0005886;gbkey=CDS;gene=ftsI;go_component=plasma membrane|0005886||IEA;go_function=penicillin binding|0008658||IEA,peptidoglycan glycosyltransferase activity|0008955||IEA;go_process=peptidoglycan biosynthetic process|0009252||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248565.1;locus_tag=L2557_RS07085;product=peptidoglycan glycosyltransferase FtsI;protein_id=WP_099659307.1;transl_table=11 NZ_JAIKUA010000094.1 RefSeq gene 29635 29952 . - . ID=gene-L2557_RS07090;Name=ftsL;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=L2557_RS07090 NZ_JAIKUA010000094.1 Protein Homology CDS 29635 29952 . - 0 ID=cds-WP_075670773.1;Parent=gene-L2557_RS07090;Dbxref=GenBank:WP_075670773.1;Name=WP_075670773.1;gbkey=CDS;gene=ftsL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004244124.1;locus_tag=L2557_RS07090;product=cell division protein FtsL;protein_id=WP_075670773.1;transl_table=11 NZ_JAIKUA010000094.1 RefSeq gene 29953 30900 . - . ID=gene-L2557_RS07095;Name=rsmH;gbkey=Gene;gene=rsmH;gene_biotype=protein_coding;locus_tag=L2557_RS07095 NZ_JAIKUA010000094.1 Protein Homology CDS 29953 30900 . - 0 ID=cds-WP_075670771.1;Parent=gene-L2557_RS07095;Dbxref=GenBank:WP_075670771.1;Name=WP_075670771.1;Ontology_term=GO:0000154,GO:0016434;gbkey=CDS;gene=rsmH;go_function=rRNA (cytosine) methyltransferase activity|0016434||IEA;go_process=rRNA modification|0000154||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017627928.1;locus_tag=L2557_RS07095;product=16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH;protein_id=WP_075670771.1;transl_table=11 NZ_JAIKUA010000094.1 RefSeq gene 30904 31362 . - . ID=gene-L2557_RS07100;Name=mraZ;gbkey=Gene;gene=mraZ;gene_biotype=protein_coding;locus_tag=L2557_RS07100 NZ_JAIKUA010000094.1 Protein Homology CDS 30904 31362 . - 0 ID=cds-WP_075670769.1;Parent=gene-L2557_RS07100;Dbxref=GenBank:WP_075670769.1;Name=WP_075670769.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=mraZ;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005167064.1;locus_tag=L2557_RS07100;product=division/cell wall cluster transcriptional repressor MraZ;protein_id=WP_075670769.1;transl_table=11 ##sequence-region NZ_JAIKUA010000095.1 1 16568 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000095.1 RefSeq region 1 16568 . + . ID=NZ_JAIKUA010000095.1:1..16568;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000095.1 RefSeq gene 84 1205 . - . ID=gene-L2557_RS07105;Name=L2557_RS07105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07105 NZ_JAIKUA010000095.1 Protein Homology CDS 84 1205 . - 0 ID=cds-WP_075672658.1;Parent=gene-L2557_RS07105;Dbxref=GenBank:WP_075672658.1;Name=WP_075672658.1;Ontology_term=GO:0043687,GO:0008198,GO:0016706;gbkey=CDS;go_function=ferrous iron binding|0008198||IEA,2-oxoglutarate-dependent dioxygenase activity|0016706||IEA;go_process=post-translational protein modification|0043687||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_013812528.1;locus_tag=L2557_RS07105;product=ribosomal protein uL16 3-hydroxylase;protein_id=WP_075672658.1;transl_table=11 NZ_JAIKUA010000095.1 RefSeq gene 1389 2852 . - . ID=gene-L2557_RS07110;Name=phoQ;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=L2557_RS07110 NZ_JAIKUA010000095.1 Protein Homology CDS 1389 2852 . - 0 ID=cds-WP_235409960.1;Parent=gene-L2557_RS07110;Dbxref=GenBank:WP_235409960.1;Name=WP_235409960.1;Ontology_term=GO:0000160,GO:0000155,GO:0004673,GO:0016772;gbkey=CDS;gene=phoQ;go_function=phosphorelay sensor kinase activity|0000155||IEA,protein histidine kinase activity|0004673||IEA,transferase activity%2C transferring phosphorus-containing groups|0016772||IEA;go_process=phosphorelay signal transduction system|0000160||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251833.1;locus_tag=L2557_RS07110;product=two-component system sensor histidine kinase PhoQ;protein_id=WP_235409960.1;transl_table=11 NZ_JAIKUA010000095.1 RefSeq gene 2854 3528 . - . ID=gene-L2557_RS07115;Name=phoP;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=L2557_RS07115 NZ_JAIKUA010000095.1 Protein Homology CDS 2854 3528 . - 0 ID=cds-WP_075672656.1;Parent=gene-L2557_RS07115;Dbxref=GenBank:WP_075672656.1;Name=WP_075672656.1;gbkey=CDS;gene=phoP;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537215.1;locus_tag=L2557_RS07115;product=two-component system response regulator PhoP;protein_id=WP_075672656.1;transl_table=11 NZ_JAIKUA010000095.1 RefSeq gene 3743 5113 . - . ID=gene-L2557_RS07120;Name=purB;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=L2557_RS07120 NZ_JAIKUA010000095.1 Protein Homology CDS 3743 5113 . - 0 ID=cds-WP_075672655.1;Parent=gene-L2557_RS07120;Dbxref=GenBank:WP_075672655.1;Name=WP_075672655.1;Ontology_term=GO:0006188,GO:0009152,GO:0004018;gbkey=CDS;gene=purB;go_function=N6-(1%2C2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity|0004018||IEA;go_process=IMP biosynthetic process|0006188||IEA,purine ribonucleotide biosynthetic process|0009152||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247115.1;locus_tag=L2557_RS07120;product=adenylosuccinate lyase;protein_id=WP_075672655.1;transl_table=11 NZ_JAIKUA010000095.1 RefSeq gene 5145 5774 . - . ID=gene-L2557_RS07125;Name=hflD;gbkey=Gene;gene=hflD;gene_biotype=protein_coding;locus_tag=L2557_RS07125 NZ_JAIKUA010000095.1 Protein Homology CDS 5145 5774 . - 0 ID=cds-WP_075672654.1;Parent=gene-L2557_RS07125;Dbxref=GenBank:WP_075672654.1;Name=WP_075672654.1;gbkey=CDS;gene=hflD;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247840.1;locus_tag=L2557_RS07125;product=high frequency lysogenization protein HflD;protein_id=WP_075672654.1;transl_table=11 NZ_JAIKUA010000095.1 RefSeq gene 5777 6880 . - . ID=gene-L2557_RS07130;Name=mnmA;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;gene_synonym=trmU;locus_tag=L2557_RS07130 NZ_JAIKUA010000095.1 Protein Homology CDS 5777 6880 . - 0 ID=cds-WP_099659586.1;Parent=gene-L2557_RS07130;Dbxref=GenBank:WP_099659586.1;Name=WP_099659586.1;Ontology_term=GO:0002143,GO:0006396,GO:0004808,GO:0016783,GO:0005737;gbkey=CDS;gene=mnmA;go_component=cytoplasm|0005737||IEA;go_function=tRNA (5-methylaminomethyl-2-thiouridylate)(34)-methyltransferase activity|0004808||IEA,sulfurtransferase activity|0016783||IEA;go_process=tRNA wobble position uridine thiolation|0002143||IEA,RNA processing|0006396||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008910856.1;locus_tag=L2557_RS07130;product=tRNA 2-thiouridine(34) synthase MnmA;protein_id=WP_099659586.1;transl_table=11 NZ_JAIKUA010000095.1 RefSeq gene 6990 7439 . - . ID=gene-L2557_RS07135;Name=L2557_RS07135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07135 NZ_JAIKUA010000095.1 Protein Homology CDS 6990 7439 . - 0 ID=cds-WP_075672652.1;Parent=gene-L2557_RS07135;Dbxref=GenBank:WP_075672652.1;Name=WP_075672652.1;Ontology_term=GO:0016787,GO:0046872;gbkey=CDS;go_function=hydrolase activity|0016787||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537210.1;locus_tag=L2557_RS07135;product=NUDIX hydrolase;protein_id=WP_075672652.1;transl_table=11 NZ_JAIKUA010000095.1 RefSeq gene 7432 8061 . - . ID=gene-L2557_RS07140;Name=rluE;gbkey=Gene;gene=rluE;gene_biotype=protein_coding;locus_tag=L2557_RS07140 NZ_JAIKUA010000095.1 Protein Homology CDS 7432 8061 . - 0 ID=cds-WP_099659587.1;Parent=gene-L2557_RS07140;Dbxref=GenBank:WP_099659587.1;Name=WP_099659587.1;Ontology_term=GO:0001522,GO:0009982;gbkey=CDS;gene=rluE;go_function=pseudouridine synthase activity|0009982||IEA;go_process=pseudouridine synthesis|0001522||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247119.1;locus_tag=L2557_RS07140;product=23S rRNA pseudouridine(2457) synthase RluE;protein_id=WP_099659587.1;transl_table=11 NZ_JAIKUA010000095.1 RefSeq gene 8200 9453 . + . ID=gene-L2557_RS07145;Name=icd;gbkey=Gene;gene=icd;gene_biotype=protein_coding;locus_tag=L2557_RS07145 NZ_JAIKUA010000095.1 Protein Homology CDS 8200 9453 . + 0 ID=cds-WP_006537208.1;Parent=gene-L2557_RS07145;Dbxref=GenBank:WP_006537208.1;Name=WP_006537208.1;Ontology_term=GO:0006099,GO:0000287,GO:0004450,GO:0051287;gbkey=CDS;gene=icd;go_function=magnesium ion binding|0000287||IEA,isocitrate dehydrogenase (NADP+) activity|0004450||IEA,NAD binding|0051287||IEA;go_process=tricarboxylic acid cycle|0006099||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_309635.1;locus_tag=L2557_RS07145;product=NADP-dependent isocitrate dehydrogenase;protein_id=WP_006537208.1;transl_table=11 NZ_JAIKUA010000095.1 RefSeq pseudogene 9563 9679 . - . ID=gene-L2557_RS07150;Name=L2557_RS07150;end_range=9679,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS07150;partial=true;pseudo=true NZ_JAIKUA010000095.1 Protein Homology CDS 9563 9679 . - 0 ID=cds-L2557_RS07150;Parent=gene-L2557_RS07150;Note=incomplete%3B partial in the middle of a contig%3B missing N-terminus;end_range=9679,.;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827304.1;locus_tag=L2557_RS07150;partial=true;product=integrase;pseudo=true;transl_table=11 NZ_JAIKUA010000095.1 RefSeq gene 9657 10001 . + . ID=gene-L2557_RS07155;Name=L2557_RS07155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07155 NZ_JAIKUA010000095.1 Protein Homology CDS 9657 10001 . + 0 ID=cds-WP_235409963.1;Parent=gene-L2557_RS07155;Dbxref=GenBank:WP_235409963.1;Name=WP_235409963.1;Ontology_term=GO:0060567,GO:0003677;gbkey=CDS;go_function=DNA binding|0003677||IEA;go_process=negative regulation of termination of DNA-templated transcription|0060567||IEA;inference=COORDINATES: protein motif:HMM:NF018262.6;locus_tag=L2557_RS07155;product=antiterminator Q family protein;protein_id=WP_235409963.1;transl_table=11 NZ_JAIKUA010000095.1 RefSeq gene 10294 10506 . + . ID=gene-L2557_RS07160;Name=cspE;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;gene_synonym=gicA,msmC;locus_tag=L2557_RS07160 NZ_JAIKUA010000095.1 Protein Homology CDS 10294 10506 . + 0 ID=cds-WP_235409961.1;Parent=gene-L2557_RS07160;Dbxref=GenBank:WP_235409961.1;Name=WP_235409961.1;Ontology_term=GO:0031564,GO:0001072,GO:0003697,GO:0003723;gbkey=CDS;gene=cspE;go_function=transcription antitermination factor activity%2C RNA binding|0001072||IEA,single-stranded DNA binding|0003697||IEA,RNA binding|0003723||IEA;go_process=transcription antitermination|0031564||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_005967874.1;locus_tag=L2557_RS07160;product=transcription antiterminator/RNA stability regulator CspE;protein_id=WP_235409961.1;transl_table=11 NZ_JAIKUA010000095.1 RefSeq gene 10514 10654 . + . ID=gene-L2557_RS18005;Name=ymcF;gbkey=Gene;gene=ymcF;gene_biotype=protein_coding;locus_tag=L2557_RS18005 NZ_JAIKUA010000095.1 Protein Homology CDS 10514 10654 . + 0 ID=cds-WP_419721724.1;Parent=gene-L2557_RS18005;Dbxref=GenBank:WP_419721724.1;Name=WP_419721724.1;gbkey=CDS;gene=ymcF;inference=COORDINATES: similar to AA sequence:RefSeq:WP_007783496.1;locus_tag=L2557_RS18005;product=cold shock small protein YmcF;protein_id=WP_419721724.1;transl_table=11 NZ_JAIKUA010000095.1 RefSeq gene 10812 11597 . + . ID=gene-L2557_RS07170;Name=L2557_RS07170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07170 NZ_JAIKUA010000095.1 GeneMarkS-2+ CDS 10812 11597 . + 0 ID=cds-WP_196576471.1;Parent=gene-L2557_RS07170;Dbxref=GenBank:WP_196576471.1;Name=WP_196576471.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS07170;product=hypothetical protein;protein_id=WP_196576471.1;transl_table=11 NZ_JAIKUA010000095.1 RefSeq gene 11588 11977 . + . ID=gene-L2557_RS07175;Name=L2557_RS07175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07175 NZ_JAIKUA010000095.1 GeneMarkS-2+ CDS 11588 11977 . + 0 ID=cds-WP_099659640.1;Parent=gene-L2557_RS07175;Dbxref=GenBank:WP_099659640.1;Name=WP_099659640.1;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS07175;product=hypothetical protein;protein_id=WP_099659640.1;transl_table=11 NZ_JAIKUA010000095.1 RefSeq gene 12167 12625 . + . ID=gene-L2557_RS07180;Name=L2557_RS07180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07180 NZ_JAIKUA010000095.1 Protein Homology CDS 12167 12625 . + 0 ID=cds-WP_063109079.1;Parent=gene-L2557_RS07180;Dbxref=GenBank:WP_063109079.1;Name=WP_063109079.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628372.1;locus_tag=L2557_RS07180;product=Hsp20 family protein;protein_id=WP_063109079.1;transl_table=11 NZ_JAIKUA010000095.1 RefSeq gene 12906 13442 . + . ID=gene-L2557_RS07185;Name=L2557_RS07185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07185 NZ_JAIKUA010000095.1 Protein Homology CDS 12906 13442 . + 0 ID=cds-WP_099659641.1;Parent=gene-L2557_RS07185;Dbxref=GenBank:WP_099659641.1;Name=WP_099659641.1;Ontology_term=GO:0005524,GO:0016887;gbkey=CDS;go_function=ATP binding|0005524||IEA,ATP hydrolysis activity|0016887||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_008460140.1;locus_tag=L2557_RS07185;product=P-loop nucleotide/nucleoside kinase family protein;protein_id=WP_099659641.1;transl_table=11 NZ_JAIKUA010000095.1 RefSeq gene 13508 14281 . + . ID=gene-L2557_RS07190;Name=L2557_RS07190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07190 NZ_JAIKUA010000095.1 Protein Homology CDS 13508 14281 . + 0 ID=cds-WP_099659642.1;Parent=gene-L2557_RS07190;Dbxref=GenBank:WP_099659642.1;Name=WP_099659642.1;Ontology_term=GO:0000166,GO:0016779,GO:0046872;gbkey=CDS;go_function=nucleotide binding|0000166||IEA,nucleotidyltransferase activity|0016779||IEA,metal ion binding|0046872||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_009653378.1;locus_tag=L2557_RS07190;product=nucleotidyltransferase domain-containing protein;protein_id=WP_099659642.1;transl_table=11 NZ_JAIKUA010000095.1 RefSeq gene 14652 15074 . + . ID=gene-L2557_RS07195;Name=L2557_RS07195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07195 NZ_JAIKUA010000095.1 Protein Homology CDS 14652 15074 . + 0 ID=cds-WP_099659643.1;Parent=gene-L2557_RS07195;Dbxref=GenBank:WP_099659643.1;Name=WP_099659643.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537833.1;locus_tag=L2557_RS07195;product=hypothetical protein;protein_id=WP_099659643.1;transl_table=11 NZ_JAIKUA010000095.1 RefSeq gene 15127 15396 . + . ID=gene-L2557_RS07200;Name=L2557_RS07200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07200 NZ_JAIKUA010000095.1 Protein Homology CDS 15127 15396 . + 0 ID=cds-WP_020946092.1;Parent=gene-L2557_RS07200;Dbxref=GenBank:WP_020946092.1;Name=WP_020946092.1;Ontology_term=GO:0005886,GO:0016020;gbkey=CDS;go_component=plasma membrane|0005886||IEA,membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006537832.1;locus_tag=L2557_RS07200;product=phage holin family protein;protein_id=WP_020946092.1;transl_table=11 NZ_JAIKUA010000095.1 RefSeq gene 15396 15866 . + . ID=gene-L2557_RS07205;Name=L2557_RS07205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07205 NZ_JAIKUA010000095.1 Protein Homology CDS 15396 15866 . + 0 ID=cds-WP_196556787.1;Parent=gene-L2557_RS07205;Dbxref=GenBank:WP_196556787.1;Name=WP_196556787.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628366.1;locus_tag=L2557_RS07205;product=lysozyme;protein_id=WP_196556787.1;transl_table=11 NZ_JAIKUA010000095.1 RefSeq gene 15848 16006 . + . ID=gene-L2557_RS07210;Name=L2557_RS07210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07210 NZ_JAIKUA010000095.1 Protein Homology CDS 15848 16006 . + 0 ID=cds-WP_235409962.1;Parent=gene-L2557_RS07210;Dbxref=GenBank:WP_235409962.1;Name=WP_235409962.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004247492.1;locus_tag=L2557_RS07210;product=GIY-YIG nuclease family protein;protein_id=WP_235409962.1;transl_table=11 NZ_JAIKUA010000095.1 RefSeq pseudogene 16009 16454 . + . ID=gene-L2557_RS07215;Name=L2557_RS07215;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS07215;pseudo=true NZ_JAIKUA010000095.1 Protein Homology CDS 16009 16454 . + 0 ID=cds-L2557_RS07215;Parent=gene-L2557_RS07215;Note=frameshifted;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827433.1;locus_tag=L2557_RS07215;product=lysis protein;pseudo=true;transl_table=11 ##sequence-region NZ_JAIKUA010000096.1 1 19373 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000096.1 RefSeq region 1 19373 . + . ID=NZ_JAIKUA010000096.1:1..19373;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000096.1 RefSeq gene 2 625 . - . ID=gene-L2557_RS07220;Name=L2557_RS07220;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07220 NZ_JAIKUA010000096.1 Protein Homology CDS 2 625 . - 0 ID=cds-WP_075673648.1;Parent=gene-L2557_RS07220;Dbxref=GenBank:WP_075673648.1;Name=WP_075673648.1;Ontology_term=GO:0009055,GO:0010181,GO:0016491,GO:0050446;gbkey=CDS;go_function=electron transfer activity|0009055||IEA,FMN binding|0010181||IEA,oxidoreductase activity|0016491||IEA,azobenzene reductase (NADP+) activity|0050446||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242810.1;locus_tag=L2557_RS07220;product=FMN-dependent NADH-azoreductase;protein_id=WP_075673648.1;transl_table=11 NZ_JAIKUA010000096.1 RefSeq gene 859 4755 . + . ID=gene-L2557_RS07225;Name=hrpA;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=L2557_RS07225 NZ_JAIKUA010000096.1 Protein Homology CDS 859 4755 . + 0 ID=cds-WP_235409964.1;Parent=gene-L2557_RS07225;Dbxref=GenBank:WP_235409964.1;Name=WP_235409964.1;Ontology_term=GO:0003676,GO:0003724,GO:0005524;gbkey=CDS;gene=hrpA;go_function=nucleic acid binding|0003676||IEA,RNA helicase activity|0003724||IEA,ATP binding|0005524||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628136.1;locus_tag=L2557_RS07225;product=ATP-dependent RNA helicase HrpA;protein_id=WP_235409964.1;transl_table=11 NZ_JAIKUA010000096.1 RefSeq gene 5005 6399 . - . ID=gene-L2557_RS07230;Name=L2557_RS07230;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07230 NZ_JAIKUA010000096.1 Protein Homology CDS 5005 6399 . - 0 ID=cds-WP_099660373.1;Parent=gene-L2557_RS07230;Dbxref=GenBank:WP_099660373.1;Name=WP_099660373.1;Ontology_term=GO:0006865,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_process=amino acid transport|0006865||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004242821.1;locus_tag=L2557_RS07230;product=basic amino acid/polyamine antiporter;protein_id=WP_099660373.1;transl_table=11 NZ_JAIKUA010000096.1 RefSeq gene 6667 7620 . - . ID=gene-L2557_RS07235;Name=ydgH;gbkey=Gene;gene=ydgH;gene_biotype=protein_coding;locus_tag=L2557_RS07235 NZ_JAIKUA010000096.1 Protein Homology CDS 6667 7620 . - 0 ID=cds-WP_075673645.1;Parent=gene-L2557_RS07235;Dbxref=GenBank:WP_075673645.1;Name=WP_075673645.1;gbkey=CDS;gene=ydgH;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012304045.1;locus_tag=L2557_RS07235;product=DUF1471 family protein YdgH;protein_id=WP_075673645.1;transl_table=11 NZ_JAIKUA010000096.1 RefSeq gene 8007 9536 . + . ID=gene-L2557_RS07240;Name=pntA;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=L2557_RS07240 NZ_JAIKUA010000096.1 Protein Homology CDS 8007 9536 . + 0 ID=cds-WP_075673644.1;Parent=gene-L2557_RS07240;Dbxref=GenBank:WP_075673644.1;Name=WP_075673644.1;Ontology_term=GO:1902600,GO:0008750;gbkey=CDS;gene=pntA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA;go_process=proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226733.1;locus_tag=L2557_RS07240;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha;protein_id=WP_075673644.1;transl_table=11 NZ_JAIKUA010000096.1 RefSeq gene 9548 10936 . + . ID=gene-L2557_RS07245;Name=pntB;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=L2557_RS07245 NZ_JAIKUA010000096.1 Protein Homology CDS 9548 10936 . + 0 ID=cds-WP_235409965.1;Parent=gene-L2557_RS07245;Dbxref=GenBank:WP_235409965.1;Name=WP_235409965.1;Ontology_term=GO:0008750,GO:0050661,GO:0016020;gbkey=CDS;gene=pntB;go_component=membrane|0016020||IEA;go_function=proton-translocating NAD(P)+ transhydrogenase activity|0008750||IEA,NADP binding|0050661||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:YP_005226734.1;locus_tag=L2557_RS07245;product=Re/Si-specific NAD(P)(+) transhydrogenase subunit beta;protein_id=WP_235409965.1;transl_table=11 NZ_JAIKUA010000096.1 RefSeq gene 11007 11957 . - . ID=gene-L2557_RS07250;Name=uspE;gbkey=Gene;gene=uspE;gene_biotype=protein_coding;locus_tag=L2557_RS07250 NZ_JAIKUA010000096.1 Protein Homology CDS 11007 11957 . - 0 ID=cds-WP_075673642.1;Parent=gene-L2557_RS07250;Dbxref=GenBank:WP_075673642.1;Name=WP_075673642.1;gbkey=CDS;gene=uspE;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248016.1;locus_tag=L2557_RS07250;product=universal stress protein UspE;protein_id=WP_075673642.1;transl_table=11 NZ_JAIKUA010000096.1 RefSeq gene 12099 12857 . - . ID=gene-L2557_RS07255;Name=L2557_RS07255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07255 NZ_JAIKUA010000096.1 Protein Homology CDS 12099 12857 . - 0 ID=cds-WP_036912995.1;Parent=gene-L2557_RS07255;Dbxref=GenBank:WP_036912995.1;Name=WP_036912995.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248018.1;locus_tag=L2557_RS07255;product=FNR family transcription factor;protein_id=WP_036912995.1;transl_table=11 NZ_JAIKUA010000096.1 RefSeq gene 13430 15820 . + . ID=gene-L2557_RS07260;Name=L2557_RS07260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07260 NZ_JAIKUA010000096.1 Protein Homology CDS 13430 15820 . + 0 ID=cds-WP_099660375.1;Parent=gene-L2557_RS07260;Dbxref=GenBank:WP_099660375.1;Name=WP_099660375.1;Ontology_term=GO:0009389,GO:0030151,GO:0051539;gbkey=CDS;go_function=dimethyl sulfoxide reductase activity|0009389||IEA,molybdenum ion binding|0030151||IEA,4 iron%2C 4 sulfur cluster binding|0051539||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_001526271.1;locus_tag=L2557_RS07260;product=DMSO/selenate family reductase complex A subunit;protein_id=WP_099660375.1;transl_table=11 NZ_JAIKUA010000096.1 RefSeq gene 15817 16446 . + . ID=gene-L2557_RS07265;Name=L2557_RS07265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07265 NZ_JAIKUA010000096.1 Protein Homology CDS 15817 16446 . + 0 ID=cds-WP_075673640.1;Parent=gene-L2557_RS07265;Dbxref=GenBank:WP_075673640.1;Name=WP_075673640.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012367900.1;locus_tag=L2557_RS07265;product=DMSO/selenate family reductase complex B subunit;protein_id=WP_075673640.1;transl_table=11 NZ_JAIKUA010000096.1 RefSeq gene 16443 17315 . + . ID=gene-L2557_RS07270;Name=L2557_RS07270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07270 NZ_JAIKUA010000096.1 Protein Homology CDS 16443 17315 . + 0 ID=cds-WP_235409966.1;Parent=gene-L2557_RS07270;Dbxref=GenBank:WP_235409966.1;Name=WP_235409966.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004251287.1;locus_tag=L2557_RS07270;product=dimethyl sulfoxide reductase anchor subunit family protein;protein_id=WP_235409966.1;transl_table=11 NZ_JAIKUA010000096.1 RefSeq gene 17330 18214 . + . ID=gene-L2557_RS07275;Name=L2557_RS07275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07275 NZ_JAIKUA010000096.1 Protein Homology CDS 17330 18214 . + 0 ID=cds-WP_075673638.1;Parent=gene-L2557_RS07275;Dbxref=GenBank:WP_075673638.1;Name=WP_075673638.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004248023.1;locus_tag=L2557_RS07275;product=4Fe-4S binding protein;protein_id=WP_075673638.1;transl_table=11 NZ_JAIKUA010000096.1 RefSeq gene 18343 19368 . + . ID=gene-L2557_RS07280;Name=L2557_RS07280;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07280 NZ_JAIKUA010000096.1 Protein Homology CDS 18343 19368 . + 0 ID=cds-WP_099660377.1;Parent=gene-L2557_RS07280;Dbxref=GenBank:WP_099660377.1;Name=WP_099660377.1;Ontology_term=GO:0003960,GO:0048038,GO:0070402;gbkey=CDS;go_function=quinone reductase (NADPH) activity|0003960||IEA,quinone binding|0048038||IEA,NADPH binding|0070402||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006536671.1;locus_tag=L2557_RS07280;product=NAD(P)H-quinone oxidoreductase;protein_id=WP_099660377.1;transl_table=11 ##sequence-region NZ_JAIKUA010000097.1 1 22459 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000097.1 RefSeq region 1 22459 . + . ID=NZ_JAIKUA010000097.1:1..22459;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000097.1 RefSeq gene 194 739 . - . ID=gene-L2557_RS07285;Name=orn;gbkey=Gene;gene=orn;gene_biotype=protein_coding;locus_tag=L2557_RS07285 NZ_JAIKUA010000097.1 Protein Homology CDS 194 739 . - 0 ID=cds-WP_006535770.1;Parent=gene-L2557_RS07285;Dbxref=GenBank:WP_006535770.1;Name=WP_006535770.1;Ontology_term=GO:0000175,GO:0003676;gbkey=CDS;gene=orn;go_function=3'-5'-RNA exonuclease activity|0000175||IEA,nucleic acid binding|0003676||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006535770.1;locus_tag=L2557_RS07285;product=oligoribonuclease;protein_id=WP_006535770.1;transl_table=11 NZ_JAIKUA010000097.1 RefSeq gene 855 1913 . + . ID=gene-L2557_RS07290;Name=rsgA;gbkey=Gene;gene=rsgA;gene_biotype=protein_coding;locus_tag=L2557_RS07290 NZ_JAIKUA010000097.1 Protein Homology CDS 855 1913 . + 0 ID=cds-WP_075672783.1;Parent=gene-L2557_RS07290;Dbxref=GenBank:WP_075672783.1;Name=WP_075672783.1;Ontology_term=GO:0003924,GO:0005525;gbkey=CDS;gene=rsgA;go_function=GTPase activity|0003924||IEA,GTP binding|0005525||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246308.1;locus_tag=L2557_RS07290;product=small ribosomal subunit biogenesis GTPase RsgA;protein_id=WP_075672783.1;transl_table=11 NZ_JAIKUA010000097.1 RefSeq gene 2002 2898 . + . ID=gene-L2557_RS07295;Name=asd;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=L2557_RS07295 NZ_JAIKUA010000097.1 Protein Homology CDS 2002 2898 . + 0 ID=cds-WP_099660287.1;Parent=gene-L2557_RS07295;Dbxref=GenBank:WP_099660287.1;Name=WP_099660287.1;Note=Phosphatidylserine decarboxylase is synthesized as a single chain precursor. Generation of the pyruvoyl active site from a Ser is coupled to cleavage of a Gly-Ser bond between the larger (beta) and smaller (alpha chains). It is an integral membrane protein.;Ontology_term=GO:0008654,GO:0004609;gbkey=CDS;gene=asd;go_function=phosphatidylserine decarboxylase activity|0004609||IEA;go_process=phospholipid biosynthetic process|0008654||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827025.1;locus_tag=L2557_RS07295;product=archaetidylserine decarboxylase;protein_id=WP_099660287.1;transl_table=11 NZ_JAIKUA010000097.1 RefSeq gene 2921 6256 . + . ID=gene-L2557_RS07300;Name=mscM;gbkey=Gene;gene=mscM;gene_biotype=protein_coding;locus_tag=L2557_RS07300 NZ_JAIKUA010000097.1 Protein Homology CDS 2921 6256 . + 0 ID=cds-WP_075672782.1;Parent=gene-L2557_RS07300;Dbxref=GenBank:WP_075672782.1;Name=WP_075672782.1;Ontology_term=GO:0055085,GO:0016020;gbkey=CDS;gene=mscM;go_component=membrane|0016020||IEA;go_process=transmembrane transport|0055085||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253043.1;locus_tag=L2557_RS07300;product=miniconductance mechanosensitive channel MscM;protein_id=WP_075672782.1;transl_table=11 NZ_JAIKUA010000097.1 RefSeq gene 6328 7128 . - . ID=gene-L2557_RS07305;Name=yigL;gbkey=Gene;gene=yigL;gene_biotype=protein_coding;locus_tag=L2557_RS07305 NZ_JAIKUA010000097.1 Protein Homology CDS 6328 7128 . - 0 ID=cds-WP_075672781.1;Parent=gene-L2557_RS07305;Dbxref=GenBank:WP_075672781.1;Name=WP_075672781.1;gbkey=CDS;gene=yigL;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246316.1;locus_tag=L2557_RS07305;product=sugar/pyridoxal phosphate phosphatase YigL;protein_id=WP_075672781.1;transl_table=11 NZ_JAIKUA010000097.1 RefSeq gene 7141 8145 . - . ID=gene-L2557_RS07310;Name=pldB;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=L2557_RS07310 NZ_JAIKUA010000097.1 Protein Homology CDS 7141 8145 . - 0 ID=cds-WP_099660289.1;Parent=gene-L2557_RS07310;Dbxref=GenBank:WP_099660289.1;Name=WP_099660289.1;gbkey=CDS;gene=pldB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249650.1;locus_tag=L2557_RS07310;product=lysophospholipase L2;protein_id=WP_099660289.1;transl_table=11 NZ_JAIKUA010000097.1 RefSeq gene 8164 9993 . - . ID=gene-L2557_RS07315;Name=recQ;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=L2557_RS07315 NZ_JAIKUA010000097.1 Protein Homology CDS 8164 9993 . - 0 ID=cds-WP_075672779.1;Parent=gene-L2557_RS07315;Dbxref=GenBank:WP_075672779.1;Name=WP_075672779.1;Ontology_term=GO:0006310,GO:0003678;gbkey=CDS;gene=recQ;go_function=DNA helicase activity|0003678||IEA;go_process=DNA recombination|0006310||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006662376.1;locus_tag=L2557_RS07315;product=ATP-dependent DNA helicase RecQ;protein_id=WP_075672779.1;transl_table=11 NZ_JAIKUA010000097.1 RefSeq gene 10108 10983 . - . ID=gene-L2557_RS07320;Name=pldA;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=L2557_RS07320 NZ_JAIKUA010000097.1 Protein Homology CDS 10108 10983 . - 0 ID=cds-WP_099660290.1;Parent=gene-L2557_RS07320;Dbxref=GenBank:WP_099660290.1;Name=WP_099660290.1;Ontology_term=GO:0006629,GO:0004620;gbkey=CDS;gene=pldA;go_function=phospholipase activity|0004620||IEA;go_process=lipid metabolic process|0006629||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004253052.1;locus_tag=L2557_RS07320;product=phospholipase A;protein_id=WP_099660290.1;transl_table=11 NZ_JAIKUA010000097.1 RefSeq gene 11216 11683 . + . ID=gene-L2557_RS07325;Name=L2557_RS07325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07325 NZ_JAIKUA010000097.1 Protein Homology CDS 11216 11683 . + 0 ID=cds-WP_075672777.1;Parent=gene-L2557_RS07325;Dbxref=GenBank:WP_075672777.1;Name=WP_075672777.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368711.1;locus_tag=L2557_RS07325;product=thioesterase family protein;protein_id=WP_075672777.1;transl_table=11 NZ_JAIKUA010000097.1 RefSeq gene 11829 12722 . + . ID=gene-L2557_RS07330;Name=rarD;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=L2557_RS07330 NZ_JAIKUA010000097.1 Protein Homology CDS 11829 12722 . + 0 ID=cds-WP_075672776.1;Parent=gene-L2557_RS07330;Dbxref=GenBank:WP_075672776.1;Name=WP_075672776.1;Ontology_term=GO:0006810,GO:0005215,GO:0005886;gbkey=CDS;gene=rarD;go_component=plasma membrane|0005886||IEA;go_function=transporter activity|0005215||IEA;go_process=transport|0006810||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249653.1;locus_tag=L2557_RS07330;product=EamA family transporter RarD;protein_id=WP_075672776.1;transl_table=11 NZ_JAIKUA010000097.1 RefSeq gene 13278 15434 . - . ID=gene-L2557_RS07335;Name=uvrD;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;gene_synonym=mutU,recL;locus_tag=L2557_RS07335 NZ_JAIKUA010000097.1 Protein Homology CDS 13278 15434 . - 0 ID=cds-WP_099660291.1;Parent=gene-L2557_RS07335;Dbxref=GenBank:WP_099660291.1;Name=WP_099660291.1;Ontology_term=GO:0006260,GO:0003677,GO:0003678,GO:0005524,GO:0016787;gbkey=CDS;gene=uvrD;go_function=DNA binding|0003677||IEA,DNA helicase activity|0003678||IEA,ATP binding|0005524||IEA,hydrolase activity|0016787||IEA;go_process=DNA replication|0006260||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017628770.1;locus_tag=L2557_RS07335;product=DNA helicase II;protein_id=WP_099660291.1;transl_table=11 NZ_JAIKUA010000097.1 RefSeq gene 15579 16295 . - . ID=gene-L2557_RS07340;Name=yigB;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=L2557_RS07340 NZ_JAIKUA010000097.1 Protein Homology CDS 15579 16295 . - 0 ID=cds-WP_075674322.1;Parent=gene-L2557_RS07340;Dbxref=GenBank:WP_075674322.1;Name=WP_075674322.1;gbkey=CDS;gene=yigB;inference=COORDINATES: similar to AA sequence:RefSeq:WP_011815342.1;locus_tag=L2557_RS07340;product=5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB;protein_id=WP_075674322.1;transl_table=11 NZ_JAIKUA010000097.1 RefSeq gene 16295 17218 . - . ID=gene-L2557_RS07345;Name=xerC;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=L2557_RS07345 NZ_JAIKUA010000097.1 Protein Homology CDS 16295 17218 . - 0 ID=cds-WP_075674323.1;Parent=gene-L2557_RS07345;Dbxref=GenBank:WP_075674323.1;Name=WP_075674323.1;Ontology_term=GO:0006310,GO:0007059,GO:0015074,GO:0051301,GO:0003677;gbkey=CDS;gene=xerC;go_function=DNA binding|0003677||IEA;go_process=DNA recombination|0006310||IEA,chromosome segregation|0007059||IEA,DNA integration|0015074||IEA,cell division|0051301||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246325.1;locus_tag=L2557_RS07345;product=tyrosine recombinase XerC;protein_id=WP_075674323.1;transl_table=11 NZ_JAIKUA010000097.1 RefSeq gene 17215 17925 . - . ID=gene-L2557_RS07350;Name=L2557_RS07350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07350 NZ_JAIKUA010000097.1 Protein Homology CDS 17215 17925 . - 0 ID=cds-WP_075674324.1;Parent=gene-L2557_RS07350;Dbxref=GenBank:WP_075674324.1;Name=WP_075674324.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246326.1;locus_tag=L2557_RS07350;product=DUF484 domain-containing protein;protein_id=WP_075674324.1;transl_table=11 NZ_JAIKUA010000097.1 RefSeq gene 17951 18775 . - . ID=gene-L2557_RS07355;Name=dapF;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=L2557_RS07355 NZ_JAIKUA010000097.1 Protein Homology CDS 17951 18775 . - 0 ID=cds-WP_075674325.1;Parent=gene-L2557_RS07355;Dbxref=GenBank:WP_075674325.1;Name=WP_075674325.1;Ontology_term=GO:0009089,GO:0008837;gbkey=CDS;gene=dapF;go_function=diaminopimelate epimerase activity|0008837||IEA;go_process=lysine biosynthetic process via diaminopimelate|0009089||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:NP_418254.2;locus_tag=L2557_RS07355;product=diaminopimelate epimerase;protein_id=WP_075674325.1;transl_table=11 NZ_JAIKUA010000097.1 RefSeq gene 18817 18984 . - . ID=gene-L2557_RS07360;Name=lptM;gbkey=Gene;gene=lptM;gene_biotype=protein_coding;gene_synonym=yifL;locus_tag=L2557_RS07360 NZ_JAIKUA010000097.1 Protein Homology CDS 18817 18984 . - 0 ID=cds-WP_075674326.1;Parent=gene-L2557_RS07360;Dbxref=GenBank:WP_075674326.1;Name=WP_075674326.1;gbkey=CDS;gene=lptM;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246328.1;locus_tag=L2557_RS07360;product=LPS translocon maturation chaperone LptM;protein_id=WP_075674326.1;transl_table=11 NZ_JAIKUA010000097.1 RefSeq gene 19064 19381 . + . ID=gene-L2557_RS07365;Name=cyaY;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=L2557_RS07365 NZ_JAIKUA010000097.1 Protein Homology CDS 19064 19381 . + 0 ID=cds-WP_075674327.1;Parent=gene-L2557_RS07365;Dbxref=GenBank:WP_075674327.1;Name=WP_075674327.1;Ontology_term=GO:0016226,GO:0005506;gbkey=CDS;gene=cyaY;go_function=iron ion binding|0005506||IEA;go_process=iron-sulfur cluster assembly|0016226||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_006814596.1;locus_tag=L2557_RS07365;product=iron donor protein CyaY;protein_id=WP_075674327.1;transl_table=11 NZ_JAIKUA010000097.1 RefSeq gene 19463 22057 . - . ID=gene-L2557_RS07370;Name=L2557_RS07370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07370 NZ_JAIKUA010000097.1 Protein Homology CDS 19463 22057 . - 0 ID=cds-WP_223673740.1;Parent=gene-L2557_RS07370;Dbxref=GenBank:WP_223673740.1;Name=WP_223673740.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_015836199.1;locus_tag=L2557_RS07370;product=class I adenylate cyclase;protein_id=WP_223673740.1;transl_table=11 ##sequence-region NZ_JAIKUA010000098.1 1 11193 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000098.1 RefSeq region 1 11193 . + . ID=NZ_JAIKUA010000098.1:1..11193;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000098.1 RefSeq gene 292 1638 . + . ID=gene-L2557_RS07375;Name=L2557_RS07375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07375 NZ_JAIKUA010000098.1 Protein Homology CDS 292 1638 . + 0 ID=cds-WP_075672271.1;Parent=gene-L2557_RS07375;Dbxref=GenBank:WP_075672271.1;Name=WP_075672271.1;Ontology_term=GO:0015851,GO:0015205,GO:0005886;gbkey=CDS;go_component=plasma membrane|0005886||IEA;go_function=nucleobase transmembrane transporter activity|0015205||IEA;go_process=nucleobase transport|0015851||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004249534.1;locus_tag=L2557_RS07375;product=NCS2 family permease;protein_id=WP_075672271.1;transl_table=11 NZ_JAIKUA010000098.1 RefSeq gene 1766 2269 . + . ID=gene-L2557_RS07380;Name=L2557_RS07380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07380 NZ_JAIKUA010000098.1 Protein Homology CDS 1766 2269 . + 0 ID=cds-WP_075672273.1;Parent=gene-L2557_RS07380;Dbxref=GenBank:WP_075672273.1;Name=WP_075672273.1;Ontology_term=GO:0016747;gbkey=CDS;go_function=acyltransferase activity%2C transferring groups other than amino-acyl groups|0016747||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246135.1;locus_tag=L2557_RS07380;product=GNAT family N-acetyltransferase;protein_id=WP_075672273.1;transl_table=11 NZ_JAIKUA010000098.1 RefSeq gene 2677 4326 . + . ID=gene-L2557_RS07385;Name=L2557_RS07385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07385 NZ_JAIKUA010000098.1 Protein Homology CDS 2677 4326 . + 0 ID=cds-WP_099660254.1;Parent=gene-L2557_RS07385;Dbxref=GenBank:WP_099660254.1;Name=WP_099660254.1;Ontology_term=GO:0006814,GO:0006885,GO:1902600,GO:0015385,GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;go_function=sodium:proton antiporter activity|0015385||IEA;go_process=sodium ion transport|0006814||IEA,regulation of pH|0006885||IEA,proton transmembrane transport|1902600||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246134.1;locus_tag=L2557_RS07385;product=Na+/H+ antiporter;protein_id=WP_099660254.1;transl_table=11 NZ_JAIKUA010000098.1 RefSeq gene 4329 5201 . + . ID=gene-L2557_RS07390;Name=L2557_RS07390;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07390 NZ_JAIKUA010000098.1 Protein Homology CDS 4329 5201 . + 0 ID=cds-WP_075672277.1;Parent=gene-L2557_RS07390;Dbxref=GenBank:WP_075672277.1;Name=WP_075672277.1;Ontology_term=GO:0016020;gbkey=CDS;go_component=membrane|0016020||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_010848671.1;locus_tag=L2557_RS07390;product=carboxylate/amino acid/amine transporter;protein_id=WP_075672277.1;transl_table=11 NZ_JAIKUA010000098.1 RefSeq gene 5116 6069 . - . ID=gene-L2557_RS07395;Name=metR;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=L2557_RS07395 NZ_JAIKUA010000098.1 Protein Homology CDS 5116 6069 . - 0 ID=cds-WP_075672279.1;Parent=gene-L2557_RS07395;Dbxref=GenBank:WP_075672279.1;Name=WP_075672279.1;Ontology_term=GO:0006355,GO:0003700;gbkey=CDS;gene=metR;go_function=DNA-binding transcription factor activity|0003700||IEA;go_process=regulation of DNA-templated transcription|0006355||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246132.1;locus_tag=L2557_RS07395;product=HTH-type transcriptional regulator MetR;protein_id=WP_075672279.1;transl_table=11 NZ_JAIKUA010000098.1 RefSeq gene 6176 8449 . + . ID=gene-L2557_RS07400;Name=metE;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=L2557_RS07400 NZ_JAIKUA010000098.1 Protein Homology CDS 6176 8449 . + 0 ID=cds-WP_075672281.1;Parent=gene-L2557_RS07400;Dbxref=GenBank:WP_075672281.1;Name=WP_075672281.1;Ontology_term=GO:0008652,GO:0009086,GO:0003871,GO:0008270;gbkey=CDS;gene=metE;go_function=5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity|0003871||IEA,zinc ion binding|0008270||IEA;go_process=amino acid biosynthetic process|0008652||IEA,methionine biosynthetic process|0009086||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_012368787.1;locus_tag=L2557_RS07400;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=WP_075672281.1;transl_table=11 NZ_JAIKUA010000098.1 RefSeq gene 8631 9458 . + . ID=gene-L2557_RS07405;Name=L2557_RS07405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07405 NZ_JAIKUA010000098.1 Protein Homology CDS 8631 9458 . + 0 ID=cds-WP_075672283.1;Parent=gene-L2557_RS07405;Dbxref=GenBank:WP_075672283.1;Name=WP_075672283.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004246130.1;locus_tag=L2557_RS07405;product=hypothetical protein;protein_id=WP_075672283.1;transl_table=11 NZ_JAIKUA010000098.1 RefSeq gene 9537 9929 . - . ID=gene-L2557_RS07410;Name=L2557_RS07410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=L2557_RS07410 NZ_JAIKUA010000098.1 Protein Homology CDS 9537 9929 . - 0 ID=cds-WP_075672285.1;Parent=gene-L2557_RS07410;Dbxref=GenBank:WP_075672285.1;Name=WP_075672285.1;gbkey=CDS;inference=COORDINATES: similar to AA sequence:RefSeq:WP_004252918.1;locus_tag=L2557_RS07410;product=YidB family protein;protein_id=WP_075672285.1;transl_table=11 NZ_JAIKUA010000098.1 RefSeq gene 10386 11144 . + . ID=gene-L2557_RS07415;Name=udp;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=L2557_RS07415 NZ_JAIKUA010000098.1 Protein Homology CDS 10386 11144 . + 0 ID=cds-WP_023583501.1;Parent=gene-L2557_RS07415;Dbxref=GenBank:WP_023583501.1;Name=WP_023583501.1;Ontology_term=GO:0009116,GO:0016763;gbkey=CDS;gene=udp;go_function=pentosyltransferase activity|0016763||IEA;go_process=nucleoside metabolic process|0009116||IEA;inference=COORDINATES: similar to AA sequence:RefSeq:WP_017827620.1;locus_tag=L2557_RS07415;product=uridine phosphorylase;protein_id=WP_023583501.1;transl_table=11 ##sequence-region NZ_JAIKUA010000099.1 1 269 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1574161 NZ_JAIKUA010000099.1 RefSeq region 1 269 . + . ID=NZ_JAIKUA010000099.1:1..269;Dbxref=taxon:1574161;collection-date=2015-03-01;country=Nigeria;gbkey=Src;genome=genomic;mol_type=genomic DNA;nat-host=bovine;strain=AB45_1 NZ_JAIKUA010000099.1 RefSeq pseudogene 1 269 . - . ID=gene-L2557_RS07420;Name=L2557_RS07420;end_range=269,.;gbkey=Gene;gene_biotype=pseudogene;locus_tag=L2557_RS07420;partial=true;pseudo=true;start_range=.,1 NZ_JAIKUA010000099.1 GeneMarkS-2+ CDS 1 269 . - 0 ID=cds-L2557_RS07420;Parent=gene-L2557_RS07420;Note=incomplete%3B too short partial abutting assembly gap%3B missing N-terminus and C-terminus;end_range=269,.;gbkey=CDS;inference=COORDINATES: ab initio prediction:GeneMarkS-2+;locus_tag=L2557_RS07420;partial=true;product=hypothetical protein;pseudo=true;start_range=.,1;transl_table=11 ###